TDE_0001 PF00308 Bacterial dnaA protein TDE_0001 PF08299 Bacterial dnaA protein helix-turn-helix TDE_0001 PF11638 DnaA N-terminal domain TDE_0002 PF00204 DNA gyrase B TDE_0002 PF00986 DNA gyrase B subunit, carboxyl terminus TDE_0002 PF01751 Toprim domain TDE_0002 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_0003 PF16481 TDE_0003 TDE_0005 PF01212 Beta-eliminating lyase TDE_0006 PF00176 SNF2 family N-terminal domain TDE_0006 PF00271 Helicase conserved C-terminal domain TDE_0006 PF04434 TDE_0006 TDE_0006 PF12419 TDE_0006 TDE_0007 PF12784 TDE_0007 TDE_0008 PF00122 E1-E2 ATPase TDE_0008 PF00403 Heavy-metal-associated domain TDE_0008 PF00702 haloacid dehalogenase-like hydrolase TDE_0009 PF13189 Cytidylate kinase-like family TDE_0010 PF00293 NUDIX domain TDE_0011 PF00578 AhpC/TSA family TDE_0011 PF10417 C-terminal domain of 1-Cys peroxiredoxin TDE_0012 PF02554 TDE_0012 TDE_0012 PF13722 TDE_0012 TDE_0013 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TDE_0013 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TDE_0016 PF00004 ATPase family associated with various cellular activities (AAA) TDE_0016 PF12002 MgsA AAA+ ATPase C terminal TDE_0016 PF16193 TDE_0016 TDE_0017 PF05343 M42 glutamyl aminopeptidase TDE_0018 PF01476 LysM domain TDE_0019 PF01268 Formate--tetrahydrofolate ligase TDE_0020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TDE_0020 PF03129 Anticodon binding domain TDE_0021 PF01066 CDP-alcohol phosphatidyltransferase TDE_0023 PF00583 Acetyltransferase (GNAT) family TDE_0024 PF00933 Glycosyl hydrolase family 3 N terminal domain TDE_0026 PF01963 TDE_0026 TDE_0027 PF01368 DHH family TDE_0027 PF02272 DHHA1 domain TDE_0028 PF00005 ABC transporter TDE_0029 PF00005 ABC transporter TDE_0030 PF01790 TDE_0030 TDE_0032 PF14501 GHKL domain TDE_0032 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TDE_0033 PF00072 Response regulator receiver domain TDE_0033 PF04397 LytTr DNA-binding domain TDE_0035 PF00583 Acetyltransferase (GNAT) family TDE_0037 PF04014 Antidote-toxin recognition MazE TDE_0038 PF00109 Beta-ketoacyl synthase, N-terminal domain TDE_0038 PF02801 Beta-ketoacyl synthase, C-terminal domain TDE_0039 PF00665 Integrase core domain TDE_0039 PF13384 Homeodomain-like domain TDE_0040 PF00501 AMP-binding enzyme TDE_0040 PF13193 AMP-binding enzyme C-terminal domain TDE_0041 PF02237 Biotin protein ligase C terminal domain TDE_0041 PF03099 Biotin/lipoate A/B protein ligase family TDE_0041 PF08279 HTH domain TDE_0042 PF01515 Phosphate acetyl/butaryl transferase TDE_0043 PF07719 Tetratricopeptide repeat TDE_0043 PF13181 Tetratricopeptide repeat TDE_0044 PF00005 ABC transporter TDE_0045 PF00005 ABC transporter TDE_0046 PF04961 Formiminotransferase-cyclodeaminase TDE_0047 PF01979 Amidohydrolase family TDE_0049 PF12784 TDE_0049 TDE_0050 PF00588 SpoU rRNA Methylase family TDE_0051 PF00465 Iron-containing alcohol dehydrogenase TDE_0052 PF01313 TDE_0052 TDE_0053 PF01311 TDE_0053 TDE_0054 PF01312 FlhB HrpN YscU SpaS Family TDE_0055 PF00771 FHIPEP family TDE_0057 PF01715 IPP transferase TDE_0058 PF06445 GyrI-like small molecule binding domain TDE_0061 PF02661 Fic/DOC family TDE_0062 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TDE_0063 PF17239 TDE_0063 TDE_0064 PF00365 Phosphofructokinase TDE_0065 PF02643 Uncharacterized ACR, COG1430 TDE_0067 PF00027 Cyclic nucleotide-binding domain TDE_0068 PF01546 Peptidase family M20/M25/M40 TDE_0068 PF07687 Peptidase dimerisation domain TDE_0070 PF00140 Sigma-70 factor, region 1 TDE_0070 PF04542 Sigma-70 region 2 TDE_0070 PF04545 Sigma-70, region 4 TDE_0071 PF01136 TDE_0071 TDE_0072 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0072 PF14827 Sensory domain of two-component sensor kinase TDE_0073 PF01687 Riboflavin kinase TDE_0073 PF06574 FAD synthetase TDE_0074 PF13520 Amino acid permease TDE_0075 PF00107 Zinc-binding dehydrogenase TDE_0075 PF08240 Alcohol dehydrogenase GroES-like domain TDE_0076 PF01791 DeoC/LacD family aldolase TDE_0077 PF09338 TDE_0077 TDE_0079 PF01381 Helix-turn-helix TDE_0079 PF07883 Cupin domain TDE_0080 PF00171 Aldehyde dehydrogenase family TDE_0081 PF09243 TDE_0081 TDE_0082 PF13411 MerR HTH family regulatory protein TDE_0083 PF01926 50S ribosome-binding GTPase TDE_0083 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TDE_0084 PF00391 PEP-utilising enzyme, mobile domain TDE_0084 PF02896 PEP-utilising enzyme, TIM barrel domain TDE_0084 PF05524 PEP-utilising enzyme, N-terminal TDE_0085 PF00580 UvrD/REP helicase N-terminal domain TDE_0085 PF13361 UvrD-like helicase C-terminal domain TDE_0086 PF12705 PD-(D/E)XK nuclease superfamily TDE_0087 PF02080 TrkA-C domain TDE_0087 PF02254 TrkA-N domain TDE_0088 PF02386 Cation transport protein TDE_0089 PF01833 IPT/TIG domain TDE_0089 PF01841 Transglutaminase-like superfamily TDE_0090 PF13490 Putative zinc-finger TDE_0091 PF04542 Sigma-70 region 2 TDE_0091 PF08281 Sigma-70, region 4 TDE_0092 PF01406 tRNA synthetases class I (C) catalytic domain TDE_0092 PF09190 DALR domain TDE_0093 PF01565 FAD binding domain TDE_0093 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TDE_0096 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TDE_0096 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_0097 PF08002 Protein of unknown function (DUF1697) TDE_0098 PF11738 Protein of unknown function (DUF3298) TDE_0098 PF13739 Domain of unknown function (DUF4163) TDE_0099 PF01555 DNA methylase TDE_0100 PF00326 Prolyl oligopeptidase family TDE_0101 PF00128 Alpha amylase, catalytic domain TDE_0101 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TDE_0102 PF00027 Cyclic nucleotide-binding domain TDE_0102 PF13581 Histidine kinase-like ATPase domain TDE_0103 PF00266 Aminotransferase class-V TDE_0104 PF01761 3-dehydroquinate synthase TDE_0105 PF01048 Phosphorylase superfamily TDE_0107 PF00128 Alpha amylase, catalytic domain TDE_0109 PF01409 tRNA synthetases class II core domain (F) TDE_0109 PF10771 Protein of unknown function (DUF2582) TDE_0110 PF01551 Peptidase family M23 TDE_0111 PF04519 TDE_0111 TDE_0112 PF03885 Protein of unknown function (DUF327) TDE_0113 PF04468 TDE_0113 TDE_0114 PF01325 Iron dependent repressor, N-terminal DNA binding domain TDE_0114 PF02742 Iron dependent repressor, metal binding and dimerisation domain TDE_0115 PF06226 TDE_0115 TDE_0116 PF03824 TDE_0116 TDE_0119 PF02561 Flagellar protein FliS TDE_0120 PF01996 F420-0:Gamma-glutamyl ligase TDE_0121 PF00884 Sulfatase TDE_0122 PF01207 Dihydrouridine synthase (Dus) TDE_0124 PF01694 Rhomboid family TDE_0125 PF00990 GGDEF domain TDE_0127 PF12844 Helix-turn-helix domain TDE_0128 PF00563 EAL domain TDE_0128 PF00990 GGDEF domain TDE_0128 PF02743 Cache domain TDE_0129 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TDE_0129 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain TDE_0129 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TDE_0129 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain TDE_0130 PF00375 Sodium:dicarboxylate symporter family TDE_0133 PF00392 Bacterial regulatory proteins, gntR family TDE_0134 PF01266 FAD dependent oxidoreductase TDE_0134 PF04324 BFD-like [2Fe-2S] binding domain TDE_0135 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_0136 PF07892 Protein of unknown function (DUF1667) TDE_0137 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TDE_0137 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TDE_0138 PF01565 FAD binding domain TDE_0138 PF02913 FAD linked oxidases, C-terminal domain TDE_0140 PF00665 Integrase core domain TDE_0140 PF13936 Helix-turn-helix domain TDE_0143 PF13343 Bacterial extracellular solute-binding protein TDE_0144 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0145 PF00005 ABC transporter TDE_0146 PF01546 Peptidase family M20/M25/M40 TDE_0146 PF07687 Peptidase dimerisation domain TDE_0148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_0148 PF07730 Histidine kinase TDE_0149 PF00072 Response regulator receiver domain TDE_0149 PF00196 Bacterial regulatory proteins, luxR family TDE_0150 PF00027 Cyclic nucleotide-binding domain TDE_0150 PF03631 TDE_0150 TDE_0151 PF04143 TDE_0151 TDE_0152 PF13520 Amino acid permease TDE_0153 PF00581 Rhodanese-like domain TDE_0153 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TDE_0153 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_0154 PF00211 Adenylate and Guanylate cyclase catalytic domain TDE_0154 PF07695 TDE_0154 TDE_0155 PF00211 Adenylate and Guanylate cyclase catalytic domain TDE_0155 PF07695 TDE_0155 TDE_0156 PF00211 Adenylate and Guanylate cyclase catalytic domain TDE_0156 PF07494 Two component regulator propeller TDE_0156 PF07495 Y_Y_Y domain TDE_0157 PF00294 pfkB family carbohydrate kinase TDE_0157 PF01081 KDPG and KHG aldolase TDE_0162 PF13860 FlgD Ig-like domain TDE_0163 PF00258 Flavodoxin TDE_0164 PF12672 TDE_0164 TDE_0165 PF12784 TDE_0165 TDE_0167 PF00005 ABC transporter TDE_0168 PF00392 Bacterial regulatory proteins, gntR family TDE_0169 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0170 PF00149 Calcineurin-like phosphoesterase TDE_0171 PF13476 AAA domain TDE_0171 PF13558 Putative exonuclease SbcCD, C subunit TDE_0172 PF02673 TDE_0172 TDE_0173 PF01580 FtsK/SpoIIIE family TDE_0173 PF09397 Ftsk gamma domain TDE_0174 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TDE_0175 PF01470 Pyroglutamyl peptidase TDE_0176 PF06166 TDE_0176 TDE_0177 PF06149 TDE_0177 TDE_0178 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0178 PF00672 HAMP domain TDE_0178 PF02743 Cache domain TDE_0181 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0181 PF00672 HAMP domain TDE_0181 PF02743 Cache domain TDE_0182 PF00005 ABC transporter TDE_0183 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0184 PF00005 ABC transporter TDE_0185 PF00005 ABC transporter TDE_0187 PF12146 Putative lysophospholipase TDE_0188 PF00962 Adenosine/AMP deaminase TDE_0189 PF01925 TDE_0189 TDE_0190 PF00892 EamA-like transporter family TDE_0191 PF00583 Acetyltransferase (GNAT) family TDE_0192 PF00326 Prolyl oligopeptidase family TDE_0195 PF13302 Acetyltransferase (GNAT) domain TDE_0196 PF09957 TDE_0196 TDE_0197 PF01850 PIN domain TDE_0198 PF06089 TDE_0198 TDE_0200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TDE_0201 PF04316 Anti-sigma-28 factor, FlgM TDE_0204 PF00749 tRNA synthetases class I (E and Q), catalytic domain TDE_0205 PF00211 Adenylate and Guanylate cyclase catalytic domain TDE_0207 PF02447 TDE_0207 TDE_0208 PF02595 Glycerate kinase family TDE_0209 PF03600 Citrate transporter TDE_0210 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TDE_0211 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0212 PF09084 NMT1/THI5 like TDE_0213 PF07719 Tetratricopeptide repeat TDE_0213 PF13424 Tetratricopeptide repeat TDE_0214 PF07238 PilZ domain TDE_0216 PF13679 TDE_0216 TDE_0217 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TDE_0217 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TDE_0219 PF05258 TDE_0219 TDE_0220 PF07878 TDE_0220 TDE_0222 PF13508 Acetyltransferase (GNAT) domain TDE_0225 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TDE_0227 PF01555 DNA methylase TDE_0229 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_0230 PF02463 RecF/RecN/SMC N terminal domain TDE_0231 PF00712 DNA polymerase III beta subunit, N-terminal domain TDE_0231 PF02767 DNA polymerase III beta subunit, central domain TDE_0231 PF02768 DNA polymerase III beta subunit, C-terminal domain TDE_0232 PF01661 Macro domain TDE_0233 PF02661 Fic/DOC family TDE_0233 PF13784 Fic/DOC family N-terminal TDE_0234 PF00005 ABC transporter TDE_0236 PF13470 TDE_0236 TDE_0237 PF00013 KH domain TDE_0237 PF01966 HD domain TDE_0237 PF12072 TDE_0237 TDE_0239 PF02504 Fatty acid synthesis protein TDE_0240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TDE_0241 PF09605 TDE_0241 TDE_0242 PF02361 Cobalt transport protein TDE_0243 PF00005 ABC transporter TDE_0244 PF00005 ABC transporter TDE_0244 PF00664 ABC transporter transmembrane region TDE_0245 PF00005 ABC transporter TDE_0245 PF00664 ABC transporter transmembrane region TDE_0246 PF00440 Bacterial regulatory proteins, tetR family TDE_0248 PF04343 TDE_0248 TDE_0249 PF01613 Flavin reductase like domain TDE_0250 PF00209 Sodium:neurotransmitter symporter family TDE_0251 PF01212 Beta-eliminating lyase TDE_0255 PF00005 ABC transporter TDE_0256 PF02361 Cobalt transport protein TDE_0257 PF09605 TDE_0257 TDE_0258 PF13649 Methyltransferase domain TDE_0259 PF01047 MarR family TDE_0260 PF13237 4Fe-4S dicluster domain TDE_0261 PF12724 Flavodoxin domain TDE_0263 PF13302 Acetyltransferase (GNAT) domain TDE_0264 PF14384 TDE_0264 TDE_0266 PF13289 TDE_0266 TDE_0267 PF01725 Ham1 family TDE_0272 PF14196 TDE_0272 TDE_0273 PF00005 ABC transporter TDE_0273 PF00664 ABC transporter transmembrane region TDE_0274 PF00005 ABC transporter TDE_0274 PF00664 ABC transporter transmembrane region TDE_0275 PF02517 CAAX protease self-immunity TDE_0276 PF13023 HD domain TDE_0277 PF01850 PIN domain TDE_0278 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TDE_0280 PF01850 PIN domain TDE_0282 PF00005 ABC transporter TDE_0283 PF02361 Cobalt transport protein TDE_0284 PF09605 TDE_0284 TDE_0285 PF00009 Elongation factor Tu GTP binding domain TDE_0285 PF00679 Elongation factor G C-terminus TDE_0285 PF03144 Elongation factor Tu domain 2 TDE_0285 PF03764 Elongation factor G, domain IV TDE_0285 PF14492 Elongation Factor G, domain II TDE_0286 PF00005 ABC transporter TDE_0287 PF00005 ABC transporter TDE_0288 PF14132 TDE_0288 TDE_0291 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TDE_0292 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ TDE_0293 PF01554 MatE TDE_0294 PF02080 TrkA-C domain TDE_0294 PF02254 TrkA-N domain TDE_0295 PF00521 DNA gyrase/topoisomerase IV, subunit A TDE_0295 PF03989 DNA gyrase C-terminal domain, beta-propeller TDE_0296 PF02971 Formiminotransferase domain TDE_0296 PF07837 Formiminotransferase domain, N-terminal subdomain TDE_0298 PF09848 Uncharacterized conserved protein (DUF2075) TDE_0299 PF00293 NUDIX domain TDE_0300 PF00883 Cytosol aminopeptidase family, catalytic domain TDE_0300 PF02789 Cytosol aminopeptidase family, N-terminal domain TDE_0301 PF04072 Leucine carboxyl methyltransferase TDE_0302 PF04221 RelB antitoxin TDE_0303 PF15738 TDE_0303 TDE_0305 PF01926 50S ribosome-binding GTPase TDE_0305 PF06071 Protein of unknown function (DUF933) TDE_0306 PF01343 Peptidase family S49 TDE_0311 PF02511 Thymidylate synthase complementing protein TDE_0312 PF02386 Cation transport protein TDE_0313 PF02254 TrkA-N domain TDE_0315 PF00005 ABC transporter TDE_0315 PF00664 ABC transporter transmembrane region TDE_0316 PF00005 ABC transporter TDE_0316 PF00664 ABC transporter transmembrane region TDE_0317 PF09862 TDE_0317 TDE_0319 PF07726 ATPase family associated with various cellular activities (AAA) TDE_0320 PF00571 CBS domain TDE_0320 PF01595 TDE_0320 TDE_0320 PF03471 Transporter associated domain TDE_0321 PF00571 CBS domain TDE_0321 PF01595 TDE_0321 TDE_0321 PF03471 Transporter associated domain TDE_0322 PF00543 Nitrogen regulatory protein P-II TDE_0323 PF07556 TDE_0323 TDE_0326 PF00270 DEAD/DEAH box helicase TDE_0326 PF00271 Helicase conserved C-terminal domain TDE_0326 PF00570 HRDC domain TDE_0326 PF09382 RQC domain TDE_0326 PF16124 TDE_0326 TDE_0327 PF13395 HNH endonuclease TDE_0327 PF16592 TDE_0327 TDE_0327 PF16593 TDE_0327 TDE_0327 PF16595 TDE_0327 TDE_0328 PF01867 CRISPR associated protein Cas1 TDE_0329 PF09827 CRISPR associated protein Cas2 TDE_0330 PF09711 CRISPR-associated protein (Cas_Csn2) TDE_0332 PF00440 Bacterial regulatory proteins, tetR family TDE_0333 PF01554 MatE TDE_0334 PF13396 TDE_0334 TDE_0335 PF00268 Ribonucleotide reductase, small chain TDE_0336 PF01594 TDE_0336 TDE_0337 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TDE_0339 PF00440 Bacterial regulatory proteins, tetR family TDE_0340 PF00274 Fructose-bisphosphate aldolase class-I TDE_0341 PF00317 Ribonucleotide reductase, all-alpha domain TDE_0341 PF02867 Ribonucleotide reductase, barrel domain TDE_0341 PF03477 ATP cone domain TDE_0342 PF03023 TDE_0342 TDE_0343 PF00561 alpha/beta hydrolase fold TDE_0344 PF04014 Antidote-toxin recognition MazE TDE_0345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0345 PF00672 HAMP domain TDE_0346 PF02743 Cache domain TDE_0347 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0347 PF02743 Cache domain TDE_0348 PF00440 Bacterial regulatory proteins, tetR family TDE_0349 PF00391 PEP-utilising enzyme, mobile domain TDE_0349 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TDE_0350 PF01554 MatE TDE_0351 PF00056 lactate/malate dehydrogenase, NAD binding domain TDE_0351 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TDE_0352 PF02502 Ribose/Galactose Isomerase TDE_0353 PF02558 Ketopantoate reductase PanE/ApbA TDE_0353 PF13472 GDSL-like Lipase/Acylhydrolase family TDE_0354 PF02525 Flavodoxin-like fold TDE_0357 PF03358 NADPH-dependent FMN reductase TDE_0358 PF12146 Putative lysophospholipase TDE_0359 PF00005 ABC transporter TDE_0359 PF00664 ABC transporter transmembrane region TDE_0360 PF00005 ABC transporter TDE_0360 PF00664 ABC transporter transmembrane region TDE_0361 PF03616 TDE_0361 TDE_0362 PF02368 Bacterial Ig-like domain (group 2) TDE_0362 PF09028 Mac 1 TDE_0363 PF12728 Helix-turn-helix domain TDE_0364 PF00005 ABC transporter TDE_0365 PF01863 Protein of unknown function DUF45 TDE_0366 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TDE_0366 PF04851 Type III restriction enzyme, res subunit TDE_0367 PF13310 TDE_0367 TDE_0368 PF01420 Type I restriction modification DNA specificity domain TDE_0369 PF02384 N-6 DNA Methylase TDE_0369 PF12161 HsdM N-terminal domain TDE_0370 PF08245 Mur ligase middle domain TDE_0371 PF12146 Putative lysophospholipase TDE_0372 PF00005 ABC transporter TDE_0373 PF00005 ABC transporter TDE_0373 PF00664 ABC transporter transmembrane region TDE_0374 PF00534 Glycosyl transferases group 1 TDE_0374 PF13439 Glycosyltransferase Family 4 TDE_0375 PF00005 ABC transporter TDE_0376 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0381 PF13248 TDE_0381 TDE_0385 PF00005 ABC transporter TDE_0385 PF00664 ABC transporter transmembrane region TDE_0386 PF13343 Bacterial extracellular solute-binding protein TDE_0387 PF01869 BadF/BadG/BcrA/BcrD ATPase family TDE_0389 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TDE_0390 PF11823 TDE_0390 TDE_0391 PF11823 TDE_0391 TDE_0392 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TDE_0393 PF00440 Bacterial regulatory proteins, tetR family TDE_0394 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0395 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0396 PF00005 ABC transporter TDE_0396 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_0397 PF00005 ABC transporter TDE_0397 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_0398 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TDE_0399 PF00246 Zinc carboxypeptidase TDE_0400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TDE_0400 PF03466 LysR substrate binding domain TDE_0401 PF00211 Adenylate and Guanylate cyclase catalytic domain TDE_0403 PF12784 TDE_0403 TDE_0405 PF02707 TDE_0405 TDE_0405 PF02722 TDE_0405 TDE_0406 PF08011 TDE_0406 TDE_0406 PF09820 TDE_0406 TDE_0407 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_0407 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TDE_0408 PF00175 Oxidoreductase NAD-binding domain TDE_0408 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TDE_0410 PF01435 Peptidase family M48 TDE_0411 PF00211 Adenylate and Guanylate cyclase catalytic domain TDE_0411 PF05226 TDE_0411 TDE_0412 PF09710 TDE_0412 TDE_0413 PF09710 TDE_0413 TDE_0415 PF09710 TDE_0415 TDE_0418 PF09710 TDE_0418 TDE_0419 PF09710 TDE_0419 TDE_0420 PF09710 TDE_0420 TDE_0421 PF09710 TDE_0421 TDE_0423 PF09710 TDE_0423 TDE_0425 PF00005 ABC transporter TDE_0425 PF00664 ABC transporter transmembrane region TDE_0425 PF03412 Peptidase C39 family TDE_0426 PF13437 HlyD family secretion protein TDE_0427 PF02321 Outer membrane efflux protein TDE_0428 PF00515 Tetratricopeptide repeat TDE_0428 PF07719 Tetratricopeptide repeat TDE_0428 PF13181 Tetratricopeptide repeat TDE_0430 PF00515 Tetratricopeptide repeat TDE_0430 PF13181 Tetratricopeptide repeat TDE_0430 PF13432 Tetratricopeptide repeat TDE_0431 PF01476 LysM domain TDE_0432 PF00515 Tetratricopeptide repeat TDE_0432 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 TDE_0434 PF02915 Rubrerythrin TDE_0435 PF00270 DEAD/DEAH box helicase TDE_0435 PF00271 Helicase conserved C-terminal domain TDE_0436 PF02565 Recombination protein O C terminal TDE_0437 PF13646 HEAT repeats TDE_0438 PF01702 Queuine tRNA-ribosyltransferase TDE_0439 PF10895 TDE_0439 TDE_0440 PF01381 Helix-turn-helix TDE_0444 PF07722 Peptidase C26 TDE_0445 PF13520 Amino acid permease TDE_0446 PF13385 Concanavalin A-like lectin/glucanases superfamily TDE_0447 PF00515 Tetratricopeptide repeat TDE_0447 PF09295 ChAPs (Chs5p-Arf1p-binding proteins) TDE_0447 PF13181 Tetratricopeptide repeat TDE_0448 PF01791 DeoC/LacD family aldolase TDE_0449 PF00210 Ferritin-like domain TDE_0450 PF01546 Peptidase family M20/M25/M40 TDE_0450 PF07687 Peptidase dimerisation domain TDE_0451 PF02274 Amidinotransferase TDE_0452 PF07927 YcfA-like protein TDE_0453 PF08972 Domain of unknown function (DUF1902) TDE_0454 PF01171 PP-loop family TDE_0455 PF10509 Galactokinase galactose-binding signature TDE_0456 PF01680 SOR/SNZ family TDE_0457 PF01789 PsbP TDE_0459 PF12671 TDE_0459 TDE_0460 PF03471 Transporter associated domain TDE_0462 PF00753 Metallo-beta-lactamase superfamily TDE_0463 PF01048 Phosphorylase superfamily TDE_0464 PF01106 NifU-like domain TDE_0465 PF01850 PIN domain TDE_0466 PF10047 TDE_0466 TDE_0468 PF17131 TDE_0468 TDE_0469 PF03176 MMPL family TDE_0470 PF00004 ATPase family associated with various cellular activities (AAA) TDE_0470 PF01434 Peptidase family M41 TDE_0470 PF06480 FtsH Extracellular TDE_0471 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TDE_0471 PF13088 BNR repeat-like domain TDE_0473 PF00122 E1-E2 ATPase TDE_0473 PF00702 haloacid dehalogenase-like hydrolase TDE_0475 PF00005 ABC transporter TDE_0476 PF02492 CobW/HypB/UreG, nucleotide-binding domain TDE_0477 PF08984 Domain of unknown function (DUF1858) TDE_0477 PF13343 Bacterial extracellular solute-binding protein TDE_0478 PF00027 Cyclic nucleotide-binding domain TDE_0478 PF13545 Crp-like helix-turn-helix domain TDE_0479 PF03063 Prismane/CO dehydrogenase family TDE_0480 PF01120 Alpha-L-fucosidase TDE_0481 PF05534 TDE_0481 TDE_0482 PF07927 YcfA-like protein TDE_0483 PF06541 TDE_0483 TDE_0484 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0484 PF00672 HAMP domain TDE_0484 PF02743 Cache domain TDE_0485 PF06182 TDE_0485 TDE_0487 PF00005 ABC transporter TDE_0488 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TDE_0492 PF00072 Response regulator receiver domain TDE_0492 PF00512 His Kinase A (phospho-acceptor) domain TDE_0492 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_0493 PF08241 Methyltransferase domain TDE_0494 PF07804 HipA-like C-terminal domain TDE_0495 PF13657 HipA N-terminal domain TDE_0496 PF13560 Helix-turn-helix domain TDE_0499 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase TDE_0502 PF12796 Ankyrin repeats (3 copies) TDE_0503 PF10020 TDE_0503 TDE_0505 PF15738 TDE_0505 TDE_0506 PF04221 RelB antitoxin TDE_0513 PF14080 TDE_0513 TDE_0520 PF09346 SMI1 / KNR4 family (SUKH-1) TDE_0521 PF00135 Carboxylesterase family TDE_0522 PF14094 TDE_0522 TDE_0523 PF14025 TDE_0523 TDE_0524 PF09406 Protein of unknown function (DUF2004) TDE_0525 PF10029 TDE_0525 TDE_0530 PF15560 TDE_0530 TDE_0532 PF13181 Tetratricopeptide repeat TDE_0535 PF00005 ABC transporter TDE_0542 PF00583 Acetyltransferase (GNAT) family TDE_0544 PF03781 Sulfatase-modifying factor enzyme 1 TDE_0549 PF04993 TfoX N-terminal domain TDE_0552 PF12796 Ankyrin repeats (3 copies) TDE_0553 PF14080 TDE_0553 TDE_0561 PF15580 TDE_0561 TDE_0563 PF08974 Domain of unknown function (DUF1877) TDE_0564 PF14137 TDE_0564 TDE_0570 PF14734 Domain of unknown function (DUF4469) with IG-like fold TDE_0570 PF14848 DNA-binding domain TDE_0571 PF03781 Sulfatase-modifying factor enzyme 1 TDE_0572 PF03781 Sulfatase-modifying factor enzyme 1 TDE_0574 PF13306 Leucine rich repeats (6 copies) TDE_0575 PF02637 GatB domain TDE_0575 PF02934 GatB/GatE catalytic domain TDE_0576 PF01425 Amidase TDE_0577 PF02686 Glu-tRNAGln amidotransferase C subunit TDE_0580 PF01882 TDE_0580 TDE_0581 PF01841 Transglutaminase-like superfamily TDE_0581 PF13181 Tetratricopeptide repeat TDE_0582 PF07726 ATPase family associated with various cellular activities (AAA) TDE_0583 PF09323 TDE_0583 TDE_0584 PF03773 TDE_0584 TDE_0588 PF00221 Aromatic amino acid lyase TDE_0589 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TDE_0590 PF01039 Carboxyl transferase domain TDE_0591 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain TDE_0591 PF02785 Biotin carboxylase C-terminal domain TDE_0591 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TDE_0592 PF00364 Biotin-requiring enzyme TDE_0593 PF12799 Leucine Rich repeats (2 copies) TDE_0596 PF13310 TDE_0596 TDE_0597 PF07055 Enoyl reductase FAD binding domain TDE_0597 PF12241 Trans-2-enoyl-CoA reductase catalytic region TDE_0597 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase TDE_0598 PF13561 Enoyl-(Acyl carrier protein) reductase TDE_0599 PF01850 PIN domain TDE_0601 PF00698 Acyl transferase domain TDE_0602 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TDE_0602 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TDE_0603 PF00483 Nucleotidyl transferase TDE_0604 PF09674 TDE_0604 TDE_0606 PF02195 ParB-like nuclease domain TDE_0607 PF13614 AAA domain TDE_0608 PF13412 Winged helix-turn-helix DNA-binding TDE_0610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TDE_0610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TDE_0614 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TDE_0615 PF01890 Cobalamin synthesis G C-terminus TDE_0615 PF11760 Cobalamin synthesis G N-terminal TDE_0619 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0619 PF00672 HAMP domain TDE_0619 PF02743 Cache domain TDE_0621 PF01554 MatE TDE_0622 PF04055 Radical SAM superfamily TDE_0623 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TDE_0624 PF02571 TDE_0624 TDE_0625 PF00005 ABC transporter TDE_0626 PF14262 Domain of unknown function (DUF4353) TDE_0627 PF01025 GrpE TDE_0628 PF00012 Hsp70 protein TDE_0629 PF00226 DnaJ domain TDE_0629 PF00684 DnaJ central domain TDE_0629 PF01556 DnaJ C terminal domain TDE_0630 PF07228 Stage II sporulation protein E (SpoIIE) TDE_0631 PF07228 Stage II sporulation protein E (SpoIIE) TDE_0632 PF01740 STAS domain TDE_0633 PF02557 D-alanyl-D-alanine carboxypeptidase TDE_0634 PF01545 Cation efflux family TDE_0634 PF16916 TDE_0634 TDE_0635 PF09992 Predicted periplasmic protein (DUF2233) TDE_0636 PF00005 ABC transporter TDE_0636 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_0637 PF00005 ABC transporter TDE_0637 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_0638 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0638 PF12911 TDE_0638 TDE_0639 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0640 PF00672 HAMP domain TDE_0640 PF02743 Cache domain TDE_0641 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TDE_0643 PF01195 Peptidyl-tRNA hydrolase TDE_0644 PF00005 ABC transporter TDE_0645 PF03968 OstA-like protein TDE_0647 PF01739 CheR methyltransferase, SAM binding domain TDE_0647 PF03705 CheR methyltransferase, all-alpha domain TDE_0648 PF00072 Response regulator receiver domain TDE_0648 PF01339 CheB methylesterase TDE_0650 PF13303 TDE_0650 TDE_0652 PF16481 TDE_0652 TDE_0654 PF01546 Peptidase family M20/M25/M40 TDE_0654 PF07687 Peptidase dimerisation domain TDE_0655 PF00072 Response regulator receiver domain TDE_0655 PF00486 Transcriptional regulatory protein, C terminal TDE_0656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_0657 PF00005 ABC transporter TDE_0658 PF02687 TDE_0658 TDE_0659 PF08020 Protein of unknown function (DUF1706) TDE_0660 PF08279 HTH domain TDE_0660 PF13280 TDE_0660 TDE_0662 PF06769 Plasmid encoded toxin Txe TDE_0663 PF04221 RelB antitoxin TDE_0664 PF00691 OmpA family TDE_0665 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TDE_0665 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TDE_0665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TDE_0665 PF10371 Domain of unknown function TDE_0665 PF12838 4Fe-4S dicluster domain TDE_0665 PF17147 TDE_0665 TDE_0666 PF00005 ABC transporter TDE_0667 PF01458 Uncharacterized protein family (UPF0051) TDE_0668 PF01458 Uncharacterized protein family (UPF0051) TDE_0669 PF12784 TDE_0669 TDE_0670 PF00004 ATPase family associated with various cellular activities (AAA) TDE_0670 PF02190 ATP-dependent protease La (LON) domain TDE_0670 PF05362 Lon protease (S16) C-terminal proteolytic domain TDE_0671 PF01850 PIN domain TDE_0673 PF00892 EamA-like transporter family TDE_0674 PF01661 Macro domain TDE_0676 PF02082 Transcriptional regulator TDE_0677 PF01206 Sulfurtransferase TusA TDE_0678 PF11823 TDE_0678 TDE_0679 PF00266 Aminotransferase class-V TDE_0680 PF02355 Protein export membrane protein TDE_0681 PF02355 Protein export membrane protein TDE_0682 PF02699 Preprotein translocase subunit TDE_0685 PF00106 short chain dehydrogenase TDE_0686 PF01259 SAICAR synthetase TDE_0687 PF00731 AIR carboxylase TDE_0689 PF01636 Phosphotransferase enzyme family TDE_0690 PF03054 tRNA methyl transferase TDE_0691 PF00005 ABC transporter TDE_0691 PF00664 ABC transporter transmembrane region TDE_0693 PF08543 Phosphomethylpyrimidine kinase TDE_0694 PF00005 ABC transporter TDE_0694 PF13732 TDE_0694 TDE_0695 PF12698 ABC-2 family transporter protein TDE_0696 PF12698 ABC-2 family transporter protein TDE_0698 PF13470 TDE_0698 TDE_0701 PF01061 TDE_0701 TDE_0702 PF00005 ABC transporter TDE_0703 PF04014 Antidote-toxin recognition MazE TDE_0704 PF01145 SPFH domain / Band 7 family TDE_0705 PF01145 SPFH domain / Band 7 family TDE_0705 PF16200 TDE_0705 TDE_0706 PF02086 D12 class N6 adenine-specific DNA methyltransferase TDE_0707 PF07690 Major Facilitator Superfamily TDE_0708 PF00881 Nitroreductase family TDE_0709 PF01625 Peptide methionine sulfoxide reductase TDE_0709 PF01641 SelR domain TDE_0711 PF12821 TDE_0711 TDE_0712 PF06738 TDE_0712 TDE_0713 PF02357 Transcription termination factor nusG TDE_0714 PF02629 CoA binding domain TDE_0714 PF02719 Polysaccharide biosynthesis protein TDE_0715 PF03572 Peptidase family S41 TDE_0716 PF02517 CAAX protease self-immunity TDE_0719 PF00005 ABC transporter TDE_0719 PF00664 ABC transporter transmembrane region TDE_0719 PF03412 Peptidase C39 family TDE_0720 PF13437 HlyD family secretion protein TDE_0722 PF03572 Peptidase family S41 TDE_0723 PF03572 Peptidase family S41 TDE_0724 PF03572 Peptidase family S41 TDE_0725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TDE_0726 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TDE_0726 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TDE_0727 PF00111 2Fe-2S iron-sulfur cluster binding domain TDE_0727 PF01799 [2Fe-2S] binding domain TDE_0728 PF00941 FAD binding domain in molybdopterin dehydrogenase TDE_0729 PF06144 DNA polymerase III, delta subunit TDE_0735 PF05016 Plasmid stabilisation system protein TDE_0736 PF12651 TDE_0736 TDE_0737 PF06769 Plasmid encoded toxin Txe TDE_0738 PF04221 RelB antitoxin TDE_0741 PF13306 Leucine rich repeats (6 copies) TDE_0743 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_0744 PF00085 Thioredoxin TDE_0746 PF00005 ABC transporter TDE_0747 PF01032 FecCD transport family TDE_0748 PF01497 Periplasmic binding protein TDE_0749 PF02514 TDE_0749 TDE_0750 PF07728 AAA domain (dynein-related subfamily) TDE_0750 PF13519 von Willebrand factor type A domain TDE_0751 PF07728 AAA domain (dynein-related subfamily) TDE_0752 PF13365 Trypsin-like peptidase domain TDE_0755 PF03553 TDE_0755 TDE_0756 PF00005 ABC transporter TDE_0757 PF01032 FecCD transport family TDE_0758 PF01497 Periplasmic binding protein TDE_0760 PF14343 TDE_0760 TDE_0765 PF00009 Elongation factor Tu GTP binding domain TDE_0765 PF03143 Elongation factor Tu C-terminal domain TDE_0765 PF03144 Elongation factor Tu domain 2 TDE_0766 PF00338 Ribosomal protein S10p/S20e TDE_0767 PF00297 Ribosomal protein L3 TDE_0768 PF00573 Ribosomal protein L4/L1 family TDE_0769 PF00276 Ribosomal protein L23 TDE_0770 PF00181 Ribosomal Proteins L2, RNA binding domain TDE_0770 PF03947 Ribosomal Proteins L2, C-terminal domain TDE_0771 PF00203 Ribosomal protein S19 TDE_0772 PF00237 Ribosomal protein L22p/L17e TDE_0773 PF00189 Ribosomal protein S3, C-terminal domain TDE_0773 PF07650 KH domain TDE_0774 PF00252 Ribosomal protein L16p/L10e TDE_0775 PF00831 Ribosomal L29 protein TDE_0776 PF00366 Ribosomal protein S17 TDE_0777 PF00238 Ribosomal protein L14p/L23e TDE_0778 PF00467 KOW motif TDE_0778 PF17136 TDE_0778 TDE_0779 PF00281 Ribosomal protein L5 TDE_0779 PF00673 ribosomal L5P family C-terminus TDE_0780 PF00253 Ribosomal protein S14p/S29e TDE_0781 PF00410 Ribosomal protein S8 TDE_0782 PF00347 Ribosomal protein L6 TDE_0783 PF00861 Ribosomal L18p/L5e family TDE_0784 PF00333 Ribosomal protein S5, N-terminal domain TDE_0784 PF03719 Ribosomal protein S5, C-terminal domain TDE_0785 PF00327 Ribosomal protein L30p/L7e TDE_0786 PF00828 Ribosomal protein L18e/L15 TDE_0787 PF00344 SecY translocase TDE_0788 PF00444 Ribosomal protein L36 TDE_0789 PF00416 Ribosomal protein S13/S18 TDE_0790 PF00411 Ribosomal protein S11 TDE_0791 PF01000 RNA polymerase Rpb3/RpoA insert domain TDE_0791 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TDE_0791 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TDE_0792 PF01196 Ribosomal protein L17 TDE_0794 PF03013 Pyrimidine dimer DNA glycosylase TDE_0795 PF08349 TDE_0795 TDE_0796 PF02811 PHP domain TDE_0797 PF00708 Acylphosphatase TDE_0798 PF13347 MFS/sugar transport protein TDE_0799 PF03009 Glycerophosphoryl diester phosphodiesterase family TDE_0800 PF00583 Acetyltransferase (GNAT) family TDE_0801 PF02082 Transcriptional regulator TDE_0802 PF13460 NADH(P)-binding TDE_0804 PF01139 tRNA-splicing ligase RtcB TDE_0806 PF09851 TDE_0806 TDE_0806 PF14470 Bacterial PH domain TDE_0808 PF00583 Acetyltransferase (GNAT) family TDE_0809 PF15428 TDE_0809 TDE_0811 PF01554 MatE TDE_0812 PF00005 ABC transporter TDE_0812 PF00664 ABC transporter transmembrane region TDE_0813 PF00005 ABC transporter TDE_0813 PF00664 ABC transporter transmembrane region TDE_0814 PF01638 HxlR-like helix-turn-helix TDE_0815 PF03606 TDE_0815 TDE_0816 PF01546 Peptidase family M20/M25/M40 TDE_0816 PF07687 Peptidase dimerisation domain TDE_0817 PF13581 Histidine kinase-like ATPase domain TDE_0817 PF14213 TDE_0817 TDE_0818 PF00005 ABC transporter TDE_0818 PF00664 ABC transporter transmembrane region TDE_0819 PF00005 ABC transporter TDE_0819 PF00664 ABC transporter transmembrane region TDE_0820 PF00440 Bacterial regulatory proteins, tetR family TDE_0823 PF07977 FabA-like domain TDE_0824 PF00188 Cysteine-rich secretory protein family TDE_0825 PF01225 Mur ligase family, catalytic domain TDE_0825 PF02875 Mur ligase family, glutamate ligase domain TDE_0825 PF08245 Mur ligase middle domain TDE_0826 PF07411 Domain of unknown function (DUF1508) TDE_0828 PF01134 Glucose inhibited division protein A TDE_0828 PF13932 GidA associated domain 3 TDE_0829 PF02127 Aminopeptidase I zinc metalloprotease (M18) TDE_0831 PF12784 TDE_0831 TDE_0833 PF03781 Sulfatase-modifying factor enzyme 1 TDE_0834 PF02508 TDE_0834 TDE_0835 PF02508 TDE_0835 TDE_0836 PF04205 FMN-binding domain TDE_0837 PF03116 TDE_0837 TDE_0838 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TDE_0838 PF13375 RnfC Barrel sandwich hybrid domain TDE_0839 PF00581 Rhodanese-like domain TDE_0841 PF13519 von Willebrand factor type A domain TDE_0844 PF00391 PEP-utilising enzyme, mobile domain TDE_0844 PF02896 PEP-utilising enzyme, TIM barrel domain TDE_0845 PF01987 Mitochondrial biogenesis AIM24 TDE_0846 PF16314 TDE_0846 TDE_0847 PF03692 TDE_0847 TDE_0849 PF02592 TDE_0849 TDE_0850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_0850 PF00672 HAMP domain TDE_0850 PF02743 Cache domain TDE_0852 PF00572 Ribosomal protein L13 TDE_0853 PF00380 Ribosomal protein S9/S16 TDE_0854 PF02631 RecX family TDE_0855 PF00072 Response regulator receiver domain TDE_0855 PF12728 Helix-turn-helix domain TDE_0856 PF00596 Class II Aldolase and Adducin N-terminal domain TDE_0859 PF01070 FMN-dependent dehydrogenase TDE_0860 PF00849 RNA pseudouridylate synthase TDE_0860 PF01479 S4 domain TDE_0861 PF00579 tRNA synthetases class I (W and Y) TDE_0862 PF12784 TDE_0862 TDE_0863 PF02308 TDE_0863 TDE_0864 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TDE_0864 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TDE_0865 PF11680 Protein of unknown function (DUF3276) TDE_0868 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TDE_0869 PF07907 TDE_0869 TDE_0870 PF00149 Calcineurin-like phosphoesterase TDE_0870 PF02872 5'-nucleotidase, C-terminal domain TDE_0872 PF00154 recA bacterial DNA recombination protein TDE_0873 PF02616 ScpA/B protein TDE_0874 PF04079 Putative transcriptional regulators (Ypuh-like) TDE_0875 PF00849 RNA pseudouridylate synthase TDE_0875 PF01479 S4 domain TDE_0876 PF01381 Helix-turn-helix TDE_0877 PF12146 Putative lysophospholipase TDE_0878 PF09957 TDE_0878 TDE_0880 PF02277 Phosphoribosyltransferase TDE_0881 PF00886 Ribosomal protein S16 TDE_0882 PF13083 KH domain TDE_0883 PF01782 RimM N-terminal domain TDE_0884 PF01746 tRNA (Guanine-1)-methyltransferase TDE_0885 PF01245 Ribosomal protein L19 TDE_0887 PF01850 PIN domain TDE_0889 PF05628 TDE_0889 TDE_0891 PF08279 HTH domain TDE_0891 PF13280 TDE_0891 TDE_0892 PF06182 TDE_0892 TDE_0893 PF00005 ABC transporter TDE_0894 PF06182 TDE_0894 TDE_0895 PF12833 Helix-turn-helix domain TDE_0896 PF00005 ABC transporter TDE_0896 PF00664 ABC transporter transmembrane region TDE_0897 PF00005 ABC transporter TDE_0897 PF00664 ABC transporter transmembrane region TDE_0898 PF09605 TDE_0898 TDE_0899 PF02361 Cobalt transport protein TDE_0900 PF00005 ABC transporter TDE_0901 PF01230 HIT domain TDE_0902 PF10988 Protein of unknown function (DUF2807) TDE_0903 PF00580 UvrD/REP helicase N-terminal domain TDE_0903 PF13361 UvrD-like helicase C-terminal domain TDE_0905 PF02361 Cobalt transport protein TDE_0906 PF00005 ABC transporter TDE_0907 PF09605 TDE_0907 TDE_0908 PF00005 ABC transporter TDE_0908 PF00664 ABC transporter transmembrane region TDE_0909 PF01555 DNA methylase TDE_0910 PF10592 TDE_0910 TDE_0911 PF09520 TDE_0911 TDE_0916 PF00005 ABC transporter TDE_0916 PF00664 ABC transporter transmembrane region TDE_0920 PF12833 Helix-turn-helix domain TDE_0921 PF00005 ABC transporter TDE_0921 PF00664 ABC transporter transmembrane region TDE_0922 PF00005 ABC transporter TDE_0922 PF00664 ABC transporter transmembrane region TDE_0923 PF00005 ABC transporter TDE_0923 PF00664 ABC transporter transmembrane region TDE_0924 PF00005 ABC transporter TDE_0924 PF00664 ABC transporter transmembrane region TDE_0925 PF01546 Peptidase family M20/M25/M40 TDE_0925 PF07687 Peptidase dimerisation domain TDE_0926 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0927 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0928 PF00005 ABC transporter TDE_0929 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TDE_0929 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TDE_0930 PF02588 TDE_0930 TDE_0930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TDE_0931 PF01554 MatE TDE_0932 PF00211 Adenylate and Guanylate cyclase catalytic domain TDE_0932 PF05226 TDE_0932 TDE_0933 PF00871 Acetokinase family TDE_0934 PF00166 Chaperonin 10 Kd subunit TDE_0937 PF00140 Sigma-70 factor, region 1 TDE_0937 PF04539 Sigma-70 region 3 TDE_0937 PF04542 Sigma-70 region 2 TDE_0937 PF04545 Sigma-70, region 4 TDE_0938 PF01170 Putative RNA methylase family UPF0020 TDE_0938 PF02926 THUMP domain TDE_0939 PF01963 TDE_0939 TDE_0941 PF00877 NlpC/P60 family TDE_0942 PF00501 AMP-binding enzyme TDE_0944 PF14734 Domain of unknown function (DUF4469) with IG-like fold TDE_0944 PF14848 DNA-binding domain TDE_0945 PF03781 Sulfatase-modifying factor enzyme 1 TDE_0947 PF00009 Elongation factor Tu GTP binding domain TDE_0947 PF00679 Elongation factor G C-terminus TDE_0947 PF03144 Elongation factor Tu domain 2 TDE_0947 PF03764 Elongation factor G, domain IV TDE_0947 PF14492 Elongation Factor G, domain II TDE_0948 PF04754 TDE_0948 TDE_0949 PF00113 Enolase, C-terminal TIM barrel domain TDE_0949 PF03952 Enolase, N-terminal domain TDE_0951 PF02608 Basic membrane protein TDE_0952 PF00005 ABC transporter TDE_0953 PF02653 TDE_0953 TDE_0954 PF02653 TDE_0954 TDE_0955 PF04011 LemA family TDE_0956 PF04536 TLP18 TDE_0957 PF03009 Glycerophosphoryl diester phosphodiesterase family TDE_0958 PF01734 Patatin-like phospholipase TDE_0959 PF07009 Protein of unknown function (DUF1312) TDE_0960 PF03102 NeuB family TDE_0960 PF08666 SAF domain TDE_0963 PF00817 impB/mucB/samB family TDE_0963 PF11798 IMS family HHH motif TDE_0963 PF11799 impB/mucB/samB family C-terminal domain TDE_0965 PF13277 YmdB-like protein TDE_0966 PF01026 TatD related DNase TDE_0968 PF01132 Elongation factor P (EF-P) OB domain TDE_0968 PF08207 Elongation factor P (EF-P) KOW-like domain TDE_0968 PF09285 Elongation factor P, C-terminal TDE_0969 PF03572 Peptidase family S41 TDE_0971 PF00750 tRNA synthetases class I (R) TDE_0971 PF03485 Arginyl tRNA synthetase N terminal domain TDE_0971 PF05746 DALR anticodon binding domain TDE_0973 PF04002 RadC-like JAB domain TDE_0975 PF04754 TDE_0975 TDE_0977 PF03781 Sulfatase-modifying factor enzyme 1 TDE_0978 PF13306 Leucine rich repeats (6 copies) TDE_0979 PF00768 D-alanyl-D-alanine carboxypeptidase TDE_0979 PF07943 Penicillin-binding protein 5, C-terminal domain TDE_0980 PF00152 tRNA synthetases class II (D, K and N) TDE_0980 PF01336 OB-fold nucleic acid binding domain TDE_0982 PF01180 Dihydroorotate dehydrogenase TDE_0984 PF00528 Binding-protein-dependent transport system inner membrane component TDE_0985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TDE_0986 PF00005 ABC transporter TDE_0986 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_0987 PF00005 ABC transporter TDE_0987 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_0988 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TDE_0990 PF05534 TDE_0990 TDE_0991 PF00830 Ribosomal L28 family TDE_0992 PF01812 5-formyltetrahydrofolate cyclo-ligase family TDE_0993 PF13181 Tetratricopeptide repeat TDE_0993 PF13432 Tetratricopeptide repeat TDE_0996 PF01204 Trehalase TDE_0997 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TDE_0997 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TDE_0999 PF01226 Formate/nitrite transporter TDE_1000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TDE_1000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TDE_1001 PF00156 Phosphoribosyl transferase domain TDE_1002 PF09335 TDE_1002 TDE_1004 PF00669 Bacterial flagellin N-terminal helical region TDE_1004 PF00700 Bacterial flagellin C-terminal helical region TDE_1006 PF00460 Flagella basal body rod protein TDE_1006 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TDE_1007 PF00460 Flagella basal body rod protein TDE_1007 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TDE_1008 PF10135 TDE_1008 TDE_1009 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_1009 PF02743 Cache domain TDE_1012 PF00575 S1 RNA binding domain TDE_1012 PF09371 Tex-like protein N-terminal domain TDE_1012 PF12836 Helix-hairpin-helix motif TDE_1012 PF16921 TDE_1012 TDE_1013 PF01814 Hemerythrin HHE cation binding domain TDE_1017 PF02601 TDE_1017 TDE_1017 PF13742 TDE_1017 TDE_1019 PF06808 TDE_1019 TDE_1020 PF03480 Bacterial extracellular solute-binding protein, family 7 TDE_1021 PF16811 TDE_1021 TDE_1022 PF00665 Integrase core domain TDE_1022 PF13936 Helix-turn-helix domain TDE_1023 PF02310 B12 binding domain TDE_1024 PF13941 TDE_1024 TDE_1025 PF01783 Ribosomal L32p protein family TDE_1026 PF00550 Phosphopantetheine attachment site TDE_1027 PF00035 Double-stranded RNA binding motif TDE_1027 PF14622 Ribonuclease-III-like TDE_1029 PF00011 Hsp20/alpha crystallin family TDE_1032 PF12784 TDE_1032 TDE_1033 PF01743 Poly A polymerase head domain TDE_1033 PF12627 Probable RNA and SrmB- binding site of polymerase A TDE_1033 PF13735 tRNA nucleotidyltransferase domain 2 putative TDE_1034 PF01544 CorA-like Mg2+ transporter protein TDE_1035 PF03551 Transcriptional regulator PadR-like family TDE_1037 PF13349 TDE_1037 TDE_1038 PF01370 NAD dependent epimerase/dehydratase family TDE_1039 PF06574 FAD synthetase TDE_1040 PF00312 Ribosomal protein S15 TDE_1041 PF00013 KH domain TDE_1041 PF00575 S1 RNA binding domain TDE_1041 PF01138 3' exoribonuclease family, domain 1 TDE_1041 PF03725 3' exoribonuclease family, domain 2 TDE_1041 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TDE_1042 PF00692 dUTPase TDE_1043 PF03739 TDE_1043 TDE_1044 PF03739 TDE_1044 TDE_1045 PF04304 TDE_1045 TDE_1046 PF11756 TDE_1046 TDE_1047 PF00164 Ribosomal protein S12/S23 TDE_1048 PF00177 Ribosomal protein S7p/S5e TDE_1049 PF00009 Elongation factor Tu GTP binding domain TDE_1049 PF00679 Elongation factor G C-terminus TDE_1049 PF03144 Elongation factor Tu domain 2 TDE_1049 PF03764 Elongation factor G, domain IV TDE_1049 PF14492 Elongation Factor G, domain II TDE_1052 PF00301 Rubredoxin TDE_1054 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_1055 PF01554 MatE TDE_1056 PF03781 Sulfatase-modifying factor enzyme 1 TDE_1061 PF00005 ABC transporter TDE_1062 PF00005 ABC transporter TDE_1063 PF01588 Putative tRNA binding domain TDE_1063 PF09334 tRNA synthetases class I (M) TDE_1064 PF02525 Flavodoxin-like fold TDE_1067 PF00005 ABC transporter TDE_1067 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_1068 PF00005 ABC transporter TDE_1068 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_1069 PF00528 Binding-protein-dependent transport system inner membrane component TDE_1069 PF12911 TDE_1069 TDE_1070 PF00528 Binding-protein-dependent transport system inner membrane component TDE_1071 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TDE_1072 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TDE_1073 PF00528 Binding-protein-dependent transport system inner membrane component TDE_1074 PF00528 Binding-protein-dependent transport system inner membrane component TDE_1075 PF00005 ABC transporter TDE_1075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_1076 PF00005 ABC transporter TDE_1076 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_1077 PF07690 Major Facilitator Superfamily TDE_1078 PF00753 Metallo-beta-lactamase superfamily TDE_1079 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TDE_1079 PF12728 Helix-turn-helix domain TDE_1080 PF00398 Ribosomal RNA adenine dimethylase TDE_1082 PF00849 RNA pseudouridylate synthase TDE_1083 PF00849 RNA pseudouridylate synthase TDE_1084 PF08245 Mur ligase middle domain TDE_1085 PF01225 Mur ligase family, catalytic domain TDE_1085 PF02875 Mur ligase family, glutamate ligase domain TDE_1085 PF08245 Mur ligase middle domain TDE_1086 PF03755 TDE_1086 TDE_1086 PF08340 TDE_1086 TDE_1087 PF13189 Cytidylate kinase-like family TDE_1090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TDE_1090 PF03129 Anticodon binding domain TDE_1090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TDE_1092 PF13432 Tetratricopeptide repeat TDE_1093 PF16258 TDE_1093 TDE_1094 PF03065 Glycosyl hydrolase family 57 TDE_1094 PF09210 Domain of unknown function (DUF1957) TDE_1095 PF00842 Alanine racemase, C-terminal domain TDE_1095 PF01168 Alanine racemase, N-terminal domain TDE_1096 PF02401 LytB protein TDE_1097 PF13673 Acetyltransferase (GNAT) domain TDE_1099 PF00583 Acetyltransferase (GNAT) family TDE_1100 PF13673 Acetyltransferase (GNAT) domain TDE_1101 PF00583 Acetyltransferase (GNAT) family TDE_1102 PF14559 Tetratricopeptide repeat TDE_1104 PF01509 TruB family pseudouridylate synthase (N terminal domain) TDE_1105 PF02033 Ribosome-binding factor A TDE_1106 PF00009 Elongation factor Tu GTP binding domain TDE_1106 PF04760 Translation initiation factor IF-2, N-terminal region TDE_1106 PF11987 Translation-initiation factor 2 TDE_1107 PF08529 NusA N-terminal domain TDE_1107 PF13184 NusA-like KH domain TDE_1107 PF13248 TDE_1107 TDE_1108 PF02576 Uncharacterised BCR, YhbC family COG0779 TDE_1108 PF17384 TDE_1108 TDE_1109 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TDE_1109 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TDE_1110 PF12799 Leucine Rich repeats (2 copies) TDE_1111 PF00375 Sodium:dicarboxylate symporter family TDE_1112 PF00406 Adenylate kinase TDE_1112 PF05191 Adenylate kinase, active site lid TDE_1114 PF00440 Bacterial regulatory proteins, tetR family TDE_1115 PF01381 Helix-turn-helix TDE_1116 PF06296 TDE_1116 TDE_1118 PF01212 Beta-eliminating lyase TDE_1121 PF13581 Histidine kinase-like ATPase domain TDE_1122 PF01740 STAS domain TDE_1123 PF07228 Stage II sporulation protein E (SpoIIE) TDE_1125 PF04471 Restriction endonuclease TDE_1125 PF13174 Tetratricopeptide repeat TDE_1125 PF13432 Tetratricopeptide repeat TDE_1126 PF13181 Tetratricopeptide repeat TDE_1127 PF13176 Tetratricopeptide repeat TDE_1127 PF13181 Tetratricopeptide repeat TDE_1127 PF13424 Tetratricopeptide repeat TDE_1127 PF13432 Tetratricopeptide repeat TDE_1127 PF14559 Tetratricopeptide repeat TDE_1130 PF02390 Putative methyltransferase TDE_1132 PF01264 Chorismate synthase TDE_1136 PF01551 Peptidase family M23 TDE_1152 PF12236 Bacteriophage head to tail connecting protein TDE_1153 PF13392 HNH endonuclease TDE_1158 PF03592 Terminase small subunit TDE_1162 PF02195 ParB-like nuclease domain TDE_1169 PF12728 Helix-turn-helix domain TDE_1170 PF01381 Helix-turn-helix TDE_1171 PF08238 Sel1 repeat TDE_1173 PF00589 Phage integrase family TDE_1173 PF13102 Phage integrase SAM-like domain TDE_1175 PF00118 TCP-1/cpn60 chaperonin family TDE_1176 PF04055 Radical SAM superfamily TDE_1177 PF12641 TDE_1177 TDE_1178 PF00005 ABC transporter TDE_1179 PF01032 FecCD transport family TDE_1180 PF01497 Periplasmic binding protein TDE_1181 PF00891 O-methyltransferase TDE_1183 PF00005 ABC transporter TDE_1188 PF02233 NAD(P) transhydrogenase beta subunit TDE_1194 PF10101 TDE_1194 TDE_1195 PF00326 Prolyl oligopeptidase family TDE_1195 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TDE_1197 PF02381 MraZ protein TDE_1198 PF01795 MraW methylase family TDE_1199 PF04999 TDE_1199 TDE_1200 PF01225 Mur ligase family, catalytic domain TDE_1200 PF02875 Mur ligase family, glutamate ligase domain TDE_1200 PF08245 Mur ligase middle domain TDE_1201 PF01098 TDE_1201 TDE_1202 PF08478 POTRA domain, FtsQ-type TDE_1203 PF02491 SHS2 domain inserted in FTSA TDE_1203 PF14450 Cell division protein FtsA TDE_1204 PF00091 Tubulin/FtsZ family, GTPase domain TDE_1204 PF12327 FtsZ family, C-terminal domain TDE_1205 PF00589 Phage integrase family TDE_1205 PF02899 Phage integrase, N-terminal SAM-like domain TDE_1206 PF07719 Tetratricopeptide repeat TDE_1206 PF13174 Tetratricopeptide repeat TDE_1206 PF14559 Tetratricopeptide repeat TDE_1207 PF02481 DNA recombination-mediator protein A TDE_1208 PF01131 DNA topoisomerase TDE_1208 PF01396 TDE_1208 TDE_1208 PF01751 Toprim domain TDE_1209 PF00589 Phage integrase family TDE_1209 PF02899 Phage integrase, N-terminal SAM-like domain TDE_1210 PF00227 Proteasome subunit TDE_1211 PF00004 ATPase family associated with various cellular activities (AAA) TDE_1211 PF07724 AAA domain (Cdc48 subfamily) TDE_1212 PF00460 Flagella basal body rod protein TDE_1213 PF00460 Flagella basal body rod protein TDE_1213 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TDE_1214 PF02049 TDE_1214 TDE_1215 PF01514 Secretory protein of YscJ/FliF family TDE_1215 PF08345 TDE_1215 TDE_1216 PF01706 FliG C-terminal domain TDE_1216 PF14841 FliG middle domain TDE_1216 PF14842 FliG N-terminal domain TDE_1217 PF02108 TDE_1217 TDE_1218 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TDE_1218 PF02874 ATP synthase alpha/beta family, beta-barrel domain TDE_1219 PF02050 Flagellar FliJ protein TDE_1221 PF00933 Glycosyl hydrolase family 3 N terminal domain TDE_1222 PF01325 Iron dependent repressor, N-terminal DNA binding domain TDE_1222 PF02742 Iron dependent repressor, metal binding and dimerisation domain TDE_1223 PF00950 TDE_1223 TDE_1224 PF00950 TDE_1224 TDE_1225 PF00005 ABC transporter TDE_1226 PF01297 Periplasmic solute binding protein family TDE_1227 PF10282 Lactonase, 7-bladed beta-propeller TDE_1228 PF13599 Pentapeptide repeats (9 copies) TDE_1232 PF03781 Sulfatase-modifying factor enzyme 1 TDE_1236 PF00121 Triosephosphate isomerase TDE_1238 PF03840 Preprotein translocase SecG subunit TDE_1240 PF02562 PhoH-like protein TDE_1241 PF01966 HD domain TDE_1241 PF07697 TDE_1241 TDE_1241 PF07698 TDE_1241 TDE_1242 PF02130 Uncharacterized protein family UPF0054 TDE_1243 PF00571 CBS domain TDE_1243 PF03471 Transporter associated domain TDE_1244 PF13432 Tetratricopeptide repeat TDE_1244 PF14559 Tetratricopeptide repeat TDE_1246 PF02415 TDE_1246 TDE_1247 PF14734 Domain of unknown function (DUF4469) with IG-like fold TDE_1247 PF14848 DNA-binding domain TDE_1248 PF01882 TDE_1248 TDE_1250 PF00092 von Willebrand factor type A domain TDE_1251 PF00092 von Willebrand factor type A domain TDE_1252 PF00515 Tetratricopeptide repeat TDE_1254 PF01713 Smr domain TDE_1256 PF13487 HD domain TDE_1259 PF01235 TDE_1259 TDE_1260 PF01633 Choline/ethanolamine kinase TDE_1260 PF12804 MobA-like NTP transferase domain TDE_1261 PF02028 BCCT family transporter TDE_1263 PF00882 Zinc dependent phospholipase C TDE_1265 PF04551 GcpE protein TDE_1266 PF00586 AIR synthase related protein, N-terminal domain TDE_1266 PF02769 AIR synthase related protein, C-terminal domain TDE_1267 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TDE_1267 PF02843 Phosphoribosylglycinamide synthetase, C domain TDE_1267 PF02844 Phosphoribosylglycinamide synthetase, N domain TDE_1268 PF06044 Dam-replacing family TDE_1270 PF02566 OsmC-like protein TDE_1271 PF00005 ABC transporter TDE_1271 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_1272 PF00005 ABC transporter TDE_1272 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_1273 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TDE_1274 PF00528 Binding-protein-dependent transport system inner membrane component TDE_1274 PF12911 TDE_1274 TDE_1275 PF00528 Binding-protein-dependent transport system inner membrane component TDE_1277 PF02906 Iron only hydrogenase large subunit, C-terminal domain TDE_1277 PF13237 4Fe-4S dicluster domain TDE_1278 PF04260 Protein of unknown function (DUF436) TDE_1279 PF00586 AIR synthase related protein, N-terminal domain TDE_1279 PF02769 AIR synthase related protein, C-terminal domain TDE_1280 PF08713 DNA alkylation repair enzyme TDE_1281 PF14384 TDE_1281 TDE_1283 PF01547 Bacterial extracellular solute-binding protein TDE_1284 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_1284 PF02743 Cache domain TDE_1285 PF01706 FliG C-terminal domain TDE_1285 PF14841 FliG middle domain TDE_1285 PF14842 FliG N-terminal domain TDE_1286 PF07719 Tetratricopeptide repeat TDE_1286 PF13181 Tetratricopeptide repeat TDE_1287 PF00270 DEAD/DEAH box helicase TDE_1287 PF00271 Helicase conserved C-terminal domain TDE_1287 PF02559 CarD-like/TRCF domain TDE_1287 PF03461 TRCF domain TDE_1288 PF02517 CAAX protease self-immunity TDE_1291 PF01966 HD domain TDE_1292 PF01523 Putative modulator of DNA gyrase TDE_1293 PF01523 Putative modulator of DNA gyrase TDE_1294 PF00381 PTS HPr component phosphorylation site TDE_1296 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TDE_1297 PF01476 LysM domain TDE_1297 PF01551 Peptidase family M23 TDE_1298 PF00027 Cyclic nucleotide-binding domain TDE_1299 PF13023 HD domain TDE_1301 PF02463 RecF/RecN/SMC N terminal domain TDE_1302 PF01814 Hemerythrin HHE cation binding domain TDE_1305 PF01381 Helix-turn-helix TDE_1308 PF00456 Transketolase, thiamine diphosphate binding domain TDE_1308 PF02779 Transketolase, pyrimidine binding domain TDE_1309 PF01523 Putative modulator of DNA gyrase TDE_1310 PF01523 Putative modulator of DNA gyrase TDE_1311 PF00005 ABC transporter TDE_1311 PF00664 ABC transporter transmembrane region TDE_1312 PF05872 TDE_1312 TDE_1313 PF00717 Peptidase S24-like TDE_1314 PF00905 Penicillin binding protein transpeptidase domain TDE_1314 PF03717 Penicillin-binding Protein dimerisation domain TDE_1314 PF03793 PASTA domain TDE_1315 PF01973 TDE_1315 TDE_1317 PF02517 CAAX protease self-immunity TDE_1318 PF07238 PilZ domain TDE_1320 PF03772 TDE_1320 TDE_1321 PF01205 Uncharacterized protein family UPF0029 TDE_1321 PF09186 Domain of unknown function (DUF1949) TDE_1324 PF04773 FecR protein TDE_1329 PF00004 ATPase family associated with various cellular activities (AAA) TDE_1330 PF03477 ATP cone domain TDE_1331 PF03477 ATP cone domain TDE_1331 PF13597 Anaerobic ribonucleoside-triphosphate reductase TDE_1332 PF01145 SPFH domain / Band 7 family TDE_1333 PF01145 SPFH domain / Band 7 family TDE_1335 PF03062 TDE_1335 TDE_1336 PF04311 TDE_1336 TDE_1337 PF10974 TDE_1337 TDE_1338 PF00288 GHMP kinases N terminal domain TDE_1338 PF08544 GHMP kinases C terminal TDE_1339 PF04026 SpoVG TDE_1340 PF01386 Ribosomal L25p family TDE_1340 PF14693 Ribosomal protein TL5, C-terminal domain TDE_1341 PF01171 PP-loop family TDE_1343 PF13365 Trypsin-like peptidase domain TDE_1344 PF12784 TDE_1344 TDE_1345 PF01807 CHC2 zinc finger TDE_1345 PF08275 DNA primase catalytic core, N-terminal domain TDE_1345 PF10410 DnaB-helicase binding domain of primase TDE_1345 PF13155 Toprim-like TDE_1346 PF00140 Sigma-70 factor, region 1 TDE_1346 PF03979 Sigma-70 factor, region 1 TDE_1346 PF04539 Sigma-70 region 3 TDE_1346 PF04542 Sigma-70 region 2 TDE_1346 PF04545 Sigma-70, region 4 TDE_1347 PF02591 Putative zinc ribbon domain TDE_1348 PF13414 TPR repeat TDE_1348 PF13432 Tetratricopeptide repeat TDE_1349 PF06723 MreB/Mbl protein TDE_1350 PF04085 rod shape-determining protein MreC TDE_1351 PF04093 TDE_1351 TDE_1352 PF00905 Penicillin binding protein transpeptidase domain TDE_1352 PF03717 Penicillin-binding Protein dimerisation domain TDE_1353 PF01098 TDE_1353 TDE_1356 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein TDE_1357 PF01263 Aldose 1-epimerase TDE_1360 PF00860 Permease family TDE_1363 PF00881 Nitroreductase family TDE_1364 PF00133 tRNA synthetases class I (I, L, M and V) TDE_1364 PF08264 Anticodon-binding domain of tRNA TDE_1364 PF10458 Valyl tRNA synthetase tRNA binding arm TDE_1365 PF00440 Bacterial regulatory proteins, tetR family TDE_1366 PF01066 CDP-alcohol phosphatidyltransferase TDE_1367 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TDE_1369 PF00271 Helicase conserved C-terminal domain TDE_1369 PF02151 UvrB/uvrC motif TDE_1369 PF04851 Type III restriction enzyme, res subunit TDE_1369 PF12344 Ultra-violet resistance protein B TDE_1370 PF01256 Carbohydrate kinase TDE_1370 PF03853 YjeF-related protein N-terminus TDE_1371 PF00773 RNB domain TDE_1373 PF01966 HD domain TDE_1375 PF01467 Cytidylyltransferase TDE_1378 PF07927 YcfA-like protein TDE_1379 PF06912 TDE_1379 TDE_1380 PF10962 TDE_1380 TDE_1381 PF01991 ATP synthase (E/31 kDa) subunit TDE_1382 PF01022 Bacterial regulatory protein, arsR family TDE_1384 PF00122 E1-E2 ATPase TDE_1384 PF00702 haloacid dehalogenase-like hydrolase TDE_1386 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_1387 PF00849 RNA pseudouridylate synthase TDE_1388 PF02681 TDE_1388 TDE_1390 PF10531 SLBB domain TDE_1390 PF13375 RnfC Barrel sandwich hybrid domain TDE_1391 PF03116 TDE_1391 TDE_1395 PF03065 Glycosyl hydrolase family 57 TDE_1395 PF09095 Domain of unknown function (DUF1926) TDE_1397 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TDE_1398 PF03961 TDE_1398 TDE_1399 PF01790 TDE_1399 TDE_1400 PF02540 NAD synthase TDE_1401 PF09335 TDE_1401 TDE_1402 PF13173 AAA domain TDE_1402 PF13635 TDE_1402 TDE_1403 PF00005 ABC transporter TDE_1403 PF12848 ABC transporter TDE_1403 PF16326 TDE_1403 TDE_1404 PF08239 Bacterial SH3 domain TDE_1405 PF13507 CobB/CobQ-like glutamine amidotransferase domain TDE_1406 PF10719 TDE_1406 TDE_1407 PF01966 HD domain TDE_1408 PF04620 TDE_1408 TDE_1409 PF04620 TDE_1409 TDE_1412 PF00571 CBS domain TDE_1412 PF00999 Sodium/hydrogen exchanger family TDE_1413 PF01467 Cytidylyltransferase TDE_1413 PF13714 Phosphoenolpyruvate phosphomutase TDE_1414 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TDE_1414 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TDE_1415 PF00266 Aminotransferase class-V TDE_1415 PF12804 MobA-like NTP transferase domain TDE_1416 PF01061 TDE_1416 TDE_1417 PF00005 ABC transporter TDE_1419 PF00535 Glycosyl transferase family 2 TDE_1422 PF00535 Glycosyl transferase family 2 TDE_1423 PF05523 WxcM-like, C-terminal TDE_1424 PF05523 WxcM-like, C-terminal TDE_1425 PF13480 Acetyltransferase (GNAT) domain TDE_1426 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TDE_1427 PF00534 Glycosyl transferases group 1 TDE_1427 PF13439 Glycosyltransferase Family 4 TDE_1429 PF00535 Glycosyl transferase family 2 TDE_1430 PF00535 Glycosyl transferase family 2 TDE_1431 PF00534 Glycosyl transferases group 1 TDE_1431 PF13439 Glycosyltransferase Family 4 TDE_1432 PF13469 Sulfotransferase family TDE_1433 PF00535 Glycosyl transferase family 2 TDE_1435 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TDE_1436 PF02096 60Kd inner membrane protein TDE_1437 PF00535 Glycosyl transferase family 2 TDE_1438 PF00534 Glycosyl transferases group 1 TDE_1438 PF13439 Glycosyltransferase Family 4 TDE_1439 PF01370 NAD dependent epimerase/dehydratase family TDE_1440 PF00483 Nucleotidyl transferase TDE_1441 PF16363 TDE_1441 TDE_1442 PF13393 Histidyl-tRNA synthetase TDE_1443 PF00588 SpoU rRNA Methylase family TDE_1443 PF08032 RNA 2'-O ribose methyltransferase substrate binding TDE_1444 PF00753 Metallo-beta-lactamase superfamily TDE_1444 PF07521 RNA-metabolising metallo-beta-lactamase TDE_1444 PF10996 Beta-Casp domain TDE_1447 PF01715 IPP transferase TDE_1448 PF01177 Asp/Glu/Hydantoin racemase TDE_1449 PF03193 Protein of unknown function, DUF258 TDE_1450 PF00488 MutS domain V TDE_1450 PF01713 Smr domain TDE_1453 PF02065 Melibiase TDE_1453 PF16875 TDE_1453 TDE_1454 PF13347 MFS/sugar transport protein TDE_1455 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TDE_1456 PF00990 GGDEF domain TDE_1457 PF01973 TDE_1457 TDE_1458 PF01973 TDE_1458 TDE_1461 PF04977 Septum formation initiator TDE_1462 PF01300 Telomere recombination TDE_1464 PF01668 SmpB protein TDE_1466 PF04055 Radical SAM superfamily TDE_1466 PF06969 HemN C-terminal domain TDE_1467 PF13487 HD domain TDE_1468 PF00814 Glycoprotease family TDE_1469 PF02367 Uncharacterised P-loop hydrolase UPF0079 TDE_1472 PF02465 TDE_1472 TDE_1472 PF07195 TDE_1472 TDE_1473 PF03646 FlaG protein TDE_1475 PF00669 Bacterial flagellin N-terminal helical region TDE_1475 PF00700 Bacterial flagellin C-terminal helical region TDE_1477 PF00669 Bacterial flagellin N-terminal helical region TDE_1477 PF00700 Bacterial flagellin C-terminal helical region TDE_1479 PF01368 DHH family TDE_1479 PF02272 DHHA1 domain TDE_1482 PF00557 Metallopeptidase family M24 TDE_1482 PF01321 Creatinase/Prolidase N-terminal domain TDE_1482 PF16188 TDE_1482 TDE_1482 PF16189 TDE_1482 TDE_1486 PF13601 Winged helix DNA-binding domain TDE_1487 PF01709 Transcriptional regulator TDE_1488 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TDE_1488 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TDE_1491 PF01584 CheW-like domain TDE_1491 PF01627 Hpt domain TDE_1491 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_1491 PF02895 Signal transducing histidine kinase, homodimeric domain TDE_1491 PF07194 P2 response regulator binding domain TDE_1492 PF01584 CheW-like domain TDE_1492 PF01739 CheR methyltransferase, SAM binding domain TDE_1493 PF13690 Chemotaxis phosphatase CheX TDE_1494 PF00072 Response regulator receiver domain TDE_1495 PF00486 Transcriptional regulatory protein, C terminal TDE_1496 PF02463 RecF/RecN/SMC N terminal domain TDE_1498 PF13525 Outer membrane lipoprotein TDE_1499 PF00206 Lyase TDE_1499 PF08328 Adenylosuccinate lyase C-terminal TDE_1500 PF09587 Bacterial capsule synthesis protein PGA_cap TDE_1501 PF00391 PEP-utilising enzyme, mobile domain TDE_1501 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TDE_1501 PF02896 PEP-utilising enzyme, TIM barrel domain TDE_1502 PF07736 Chorismate mutase type I TDE_1503 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TDE_1503 PF07497 Rho termination factor, RNA-binding domain TDE_1503 PF07498 Rho termination factor, N-terminal domain TDE_1504 PF01197 Ribosomal protein L31 TDE_1505 PF01957 NfeD-like C-terminal, partner-binding TDE_1506 PF03313 TDE_1506 TDE_1507 PF03315 Serine dehydratase beta chain TDE_1508 PF14387 TDE_1508 TDE_1509 PF00005 ABC transporter TDE_1510 PF03239 TDE_1510 TDE_1511 PF10634 Fe2+ transport protein TDE_1512 PF10080 TDE_1512 TDE_1514 PF02687 TDE_1514 TDE_1514 PF12704 MacB-like periplasmic core domain TDE_1515 PF02687 TDE_1515 TDE_1515 PF12704 MacB-like periplasmic core domain TDE_1516 PF00005 ABC transporter TDE_1517 PF04205 FMN-binding domain TDE_1518 PF02687 TDE_1518 TDE_1519 PF10016 TDE_1519 TDE_1520 PF05681 TDE_1520 TDE_1521 PF05683 Fumarase C-terminus TDE_1522 PF08218 Citrate lyase ligase C-terminal domain TDE_1523 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase TDE_1523 PF03802 TDE_1523 TDE_1534 PF04246 TDE_1534 TDE_1535 PF13277 YmdB-like protein TDE_1536 PF13414 TPR repeat TDE_1536 PF13432 Tetratricopeptide repeat TDE_1537 PF00348 Polyprenyl synthetase TDE_1538 PF00533 BRCA1 C Terminus (BRCT) domain TDE_1538 PF01653 NAD-dependent DNA ligase adenylation domain TDE_1538 PF03120 NAD-dependent DNA ligase OB-fold domain TDE_1538 PF14520 Helix-hairpin-helix domain TDE_1540 PF03692 TDE_1540 TDE_1541 PF12706 Beta-lactamase superfamily domain TDE_1543 PF02618 YceG-like family TDE_1544 PF00534 Glycosyl transferases group 1 TDE_1544 PF13439 Glycosyltransferase Family 4 TDE_1545 PF00156 Phosphoribosyl transferase domain TDE_1546 PF13290 TDE_1546 TDE_1547 PF01351 Ribonuclease HII TDE_1548 PF02575 YbaB/EbfC DNA-binding family TDE_1549 PF02132 RecR protein TDE_1549 PF13662 Toprim domain TDE_1550 PF00365 Phosphofructokinase TDE_1551 PF03099 Biotin/lipoate A/B protein ligase family TDE_1551 PF10437 Bacterial lipoate protein ligase C-terminus TDE_1556 PF00263 TDE_1556 TDE_1558 PF03534 Salmonella virulence plasmid 65kDa B protein TDE_1558 PF12256 Insecticide toxin TcdB middle/N-terminal region TDE_1573 PF04221 RelB antitoxin TDE_1575 PF04055 Radical SAM superfamily TDE_1576 PF00919 Uncharacterized protein family UPF0004 TDE_1576 PF01938 TRAM domain TDE_1576 PF04055 Radical SAM superfamily TDE_1578 PF12850 Calcineurin-like phosphoesterase superfamily domain TDE_1579 PF05670 TDE_1579 TDE_1579 PF05833 Fibronectin-binding protein A N-terminus (FbpA) TDE_1581 PF09835 TDE_1581 TDE_1582 PF00534 Glycosyl transferases group 1 TDE_1582 PF08323 Starch synthase catalytic domain TDE_1584 PF04402 Protein of unknown function (DUF541) TDE_1587 PF00152 tRNA synthetases class II (D, K and N) TDE_1587 PF01336 OB-fold nucleic acid binding domain TDE_1587 PF02938 GAD domain TDE_1588 PF00579 tRNA synthetases class I (W and Y) TDE_1589 PF01584 CheW-like domain TDE_1590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TDE_1591 PF01513 ATP-NAD kinase TDE_1592 PF00005 ABC transporter TDE_1592 PF12848 ABC transporter TDE_1593 PF02256 Iron hydrogenase small subunit TDE_1593 PF02906 Iron only hydrogenase large subunit, C-terminal domain TDE_1593 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TDE_1593 PF12838 4Fe-4S dicluster domain TDE_1593 PF13510 2Fe-2S iron-sulfur cluster binding domain TDE_1594 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_1594 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TDE_1594 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TDE_1595 PF01888 CbiD TDE_1596 PF09605 TDE_1596 TDE_1597 PF02361 Cobalt transport protein TDE_1598 PF00005 ABC transporter TDE_1599 PF00005 ABC transporter TDE_1599 PF00664 ABC transporter transmembrane region TDE_1600 PF00005 ABC transporter TDE_1600 PF00664 ABC transporter transmembrane region TDE_1601 PF00440 Bacterial regulatory proteins, tetR family TDE_1603 PF00005 ABC transporter TDE_1604 PF02361 Cobalt transport protein TDE_1605 PF09605 TDE_1605 TDE_1606 PF00440 Bacterial regulatory proteins, tetR family TDE_1607 PF00293 NUDIX domain TDE_1608 PF13649 Methyltransferase domain TDE_1609 PF03537 Glycoside-hydrolase family GH114 TDE_1610 PF01381 Helix-turn-helix TDE_1612 PF14681 Uracil phosphoribosyltransferase TDE_1616 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TDE_1616 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TDE_1620 PF13245 Part of AAA domain TDE_1621 PF13304 AAA domain TDE_1623 PF05066 HB1, ASXL, restriction endonuclease HTH domain TDE_1624 PF02347 Glycine cleavage system P-protein TDE_1625 PF02347 Glycine cleavage system P-protein TDE_1626 PF01597 Glycine cleavage H-protein TDE_1627 PF01571 Aminomethyltransferase folate-binding domain TDE_1627 PF08669 Glycine cleavage T-protein C-terminal barrel domain TDE_1628 PF10882 TDE_1628 TDE_1629 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TDE_1629 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_1631 PF04223 Citrate lyase, alpha subunit (CitF) TDE_1632 PF03328 HpcH/HpaI aldolase/citrate lyase family TDE_1633 PF06857 TDE_1633 TDE_1634 PF14384 TDE_1634 TDE_1635 PF04365 Protein of unknown function (DUF497) TDE_1637 PF00476 DNA polymerase family A TDE_1637 PF01367 5'-3' exonuclease, C-terminal SAM fold TDE_1637 PF01612 3'-5' exonuclease TDE_1637 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TDE_1638 PF01121 Dephospho-CoA kinase TDE_1639 PF05036 Sporulation related domain TDE_1640 PF01487 Type I 3-dehydroquinase TDE_1640 PF01488 Shikimate / quinate 5-dehydrogenase TDE_1640 PF08501 Shikimate dehydrogenase substrate binding domain TDE_1641 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TDE_1643 PF03793 PASTA domain TDE_1644 PF00551 Formyl transferase TDE_1644 PF02911 Formyl transferase, C-terminal domain TDE_1645 PF01327 Polypeptide deformylase TDE_1647 PF01381 Helix-turn-helix TDE_1648 PF05016 Plasmid stabilisation system protein TDE_1649 PF02361 Cobalt transport protein TDE_1650 PF00005 ABC transporter TDE_1651 PF02632 BioY family TDE_1652 PF00005 ABC transporter TDE_1652 PF00664 ABC transporter transmembrane region TDE_1654 PF00270 DEAD/DEAH box helicase TDE_1654 PF00271 Helicase conserved C-terminal domain TDE_1654 PF04408 Helicase associated domain (HA2) TDE_1654 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TDE_1655 PF09413 Domain of unknown function (DUF2007) TDE_1656 PF07720 Tetratricopeptide repeat TDE_1657 PF01029 NusB family TDE_1659 PF01411 tRNA synthetases class II (A) TDE_1659 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TDE_1660 PF13306 Leucine rich repeats (6 copies) TDE_1661 PF09912 TDE_1661 TDE_1662 PF00772 DnaB-like helicase N terminal domain TDE_1662 PF03796 DnaB-like helicase C terminal domain TDE_1663 PF00691 OmpA family TDE_1667 PF01008 Initiation factor 2 subunit family TDE_1668 PF13520 Amino acid permease TDE_1669 PF00155 Aminotransferase class I and II TDE_1670 PF01047 MarR family TDE_1671 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TDE_1671 PF05697 Bacterial trigger factor protein (TF) TDE_1671 PF05698 Bacterial trigger factor protein (TF) C-terminus TDE_1672 PF00574 Clp protease TDE_1673 PF06689 ClpX C4-type zinc finger TDE_1673 PF07724 AAA domain (Cdc48 subfamily) TDE_1673 PF10431 C-terminal, D2-small domain, of ClpB protein TDE_1675 PF01281 Ribosomal protein L9, N-terminal domain TDE_1675 PF03948 Ribosomal protein L9, C-terminal domain TDE_1676 PF01084 Ribosomal protein S18 TDE_1677 PF00436 Single-strand binding protein family TDE_1678 PF01250 Ribosomal protein S6 TDE_1679 PF00137 ATP synthase subunit C TDE_1681 PF01813 ATP synthase subunit D TDE_1682 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TDE_1682 PF02874 ATP synthase alpha/beta family, beta-barrel domain TDE_1683 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TDE_1683 PF02874 ATP synthase alpha/beta family, beta-barrel domain TDE_1683 PF16886 TDE_1683 TDE_1684 PF00156 Phosphoribosyl transferase domain TDE_1685 PF00990 GGDEF domain TDE_1685 PF07494 Two component regulator propeller TDE_1685 PF07495 Y_Y_Y domain TDE_1686 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TDE_1687 PF13181 Tetratricopeptide repeat TDE_1687 PF14559 Tetratricopeptide repeat TDE_1689 PF00005 ABC transporter TDE_1691 PF12784 TDE_1691 TDE_1695 PF01869 BadF/BadG/BcrA/BcrD ATPase family TDE_1695 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TDE_1695 PF09989 TDE_1695 TDE_1696 PF07171 MlrC C-terminus TDE_1696 PF07364 Protein of unknown function (DUF1485) TDE_1697 PF00300 Histidine phosphatase superfamily (branch 1) TDE_1698 PF00149 Calcineurin-like phosphoesterase TDE_1706 PF02464 Competence-damaged protein TDE_1707 PF04519 TDE_1707 TDE_1708 PF00795 Carbon-nitrogen hydrolase TDE_1709 PF00216 Bacterial DNA-binding protein TDE_1710 PF01649 Ribosomal protein S20 TDE_1711 PF04607 Region found in RelA / SpoT proteins TDE_1711 PF13181 Tetratricopeptide repeat TDE_1712 PF04620 TDE_1712 TDE_1714 PF01520 N-acetylmuramoyl-L-alanine amidase TDE_1714 PF07833 Copper amine oxidase N-terminal domain TDE_1715 PF00162 Phosphoglycerate kinase TDE_1716 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TDE_1717 PF13505 Outer membrane protein beta-barrel domain TDE_1718 PF00117 Glutamine amidotransferase class-I TDE_1718 PF00958 GMP synthase C terminal domain TDE_1718 PF01171 PP-loop family TDE_1719 PF01047 MarR family TDE_1720 PF07505 TDE_1720 TDE_1721 PF04055 Radical SAM superfamily TDE_1723 PF00728 Glycosyl hydrolase family 20, catalytic domain TDE_1726 PF01743 Poly A polymerase head domain TDE_1726 PF12627 Probable RNA and SrmB- binding site of polymerase A TDE_1727 PF02566 OsmC-like protein TDE_1730 PF00703 Glycosyl hydrolases family 2 TDE_1730 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TDE_1730 PF02837 Glycosyl hydrolases family 2, sugar binding domain TDE_1731 PF07690 Major Facilitator Superfamily TDE_1732 PF00226 DnaJ domain TDE_1733 PF00557 Metallopeptidase family M24 TDE_1734 PF03372 Endonuclease/Exonuclease/phosphatase family TDE_1736 PF00037 4Fe-4S binding domain TDE_1738 PF01551 Peptidase family M23 TDE_1739 PF02388 FemAB family TDE_1741 PF00905 Penicillin binding protein transpeptidase domain TDE_1741 PF00912 Transglycosylase TDE_1742 PF00501 AMP-binding enzyme TDE_1743 PF02417 TDE_1743 TDE_1744 PF02417 TDE_1744 TDE_1745 PF02410 Oligomerisation domain TDE_1746 PF03816 Cell envelope-related transcriptional attenuator domain TDE_1746 PF13399 LytR cell envelope-related transcriptional attenuator TDE_1747 PF01467 Cytidylyltransferase TDE_1747 PF01966 HD domain TDE_1748 PF01018 GTP1/OBG TDE_1748 PF01926 50S ribosome-binding GTPase TDE_1749 PF01016 Ribosomal L27 protein TDE_1750 PF04327 Protein of unknown function (DUF464) TDE_1751 PF00829 Ribosomal prokaryotic L21 protein TDE_1752 PF00665 Integrase core domain TDE_1752 PF13936 Helix-turn-helix domain TDE_1753 PF16363 TDE_1753 TDE_1754 PF01880 Desulfoferrodoxin TDE_1760 PF01966 HD domain TDE_1761 PF09860 TDE_1761 TDE_1762 PF13419 Haloacid dehalogenase-like hydrolase TDE_1763 PF13649 Methyltransferase domain TDE_1767 PF00912 Transglycosylase TDE_1784 PF06445 GyrI-like small molecule binding domain TDE_1784 PF12833 Helix-turn-helix domain TDE_1790 PF05973 TDE_1790 TDE_1793 PF00795 Carbon-nitrogen hydrolase TDE_1796 PF04402 Protein of unknown function (DUF541) TDE_1805 PF04055 Radical SAM superfamily TDE_1805 PF13353 4Fe-4S single cluster domain TDE_1806 PF14384 TDE_1806 TDE_1807 PF04365 Protein of unknown function (DUF497) TDE_1811 PF04471 Restriction endonuclease TDE_1813 PF05973 TDE_1813 TDE_1816 PF08357 SEFIR domain TDE_1818 PF08239 Bacterial SH3 domain TDE_1825 PF14279 TDE_1825 TDE_1826 PF01841 Transglutaminase-like superfamily TDE_1827 PF00795 Carbon-nitrogen hydrolase TDE_1829 PF13650 Aspartyl protease TDE_1832 PF04402 Protein of unknown function (DUF541) TDE_1837 PF15919 TDE_1837 TDE_1838 PF07927 YcfA-like protein TDE_1844 PF00589 Phage integrase family TDE_1844 PF13495 Phage integrase, N-terminal SAM-like domain TDE_1849 PF17131 TDE_1849 TDE_1850 PF02687 TDE_1850 TDE_1850 PF12704 MacB-like periplasmic core domain TDE_1851 PF02687 TDE_1851 TDE_1852 PF00005 ABC transporter TDE_1854 PF01909 Nucleotidyltransferase domain TDE_1855 PF13597 Anaerobic ribonucleoside-triphosphate reductase TDE_1856 PF04055 Radical SAM superfamily TDE_1856 PF13353 4Fe-4S single cluster domain TDE_1857 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) TDE_1858 PF03551 Transcriptional regulator PadR-like family TDE_1859 PF08006 TDE_1859 TDE_1859 PF13349 TDE_1859 TDE_1860 PF08006 TDE_1860 TDE_1862 PF13349 TDE_1862 TDE_1863 PF01330 RuvA N terminal domain TDE_1863 PF14520 Helix-hairpin-helix domain TDE_1864 PF02075 Crossover junction endodeoxyribonuclease RuvC TDE_1865 PF00675 Insulinase (Peptidase family M16) TDE_1865 PF05193 Peptidase M16 inactive domain TDE_1865 PF08367 Peptidase M16C associated TDE_1870 PF02517 CAAX protease self-immunity TDE_1871 PF02517 CAAX protease self-immunity TDE_1873 PF02517 CAAX protease self-immunity TDE_1876 PF03808 TDE_1876 TDE_1877 PF04452 RNA methyltransferase TDE_1878 PF13419 Haloacid dehalogenase-like hydrolase TDE_1881 PF03602 Conserved hypothetical protein 95 TDE_1882 PF00232 Glycosyl hydrolase family 1 TDE_1883 PF00892 EamA-like transporter family TDE_1886 PF00919 Uncharacterized protein family UPF0004 TDE_1886 PF04055 Radical SAM superfamily TDE_1887 PF13181 Tetratricopeptide repeat TDE_1887 PF13432 Tetratricopeptide repeat TDE_1888 PF04519 TDE_1888 TDE_1889 PF05525 TDE_1889 TDE_1891 PF12784 TDE_1891 TDE_1893 PF00009 Elongation factor Tu GTP binding domain TDE_1893 PF00679 Elongation factor G C-terminus TDE_1893 PF03144 Elongation factor Tu domain 2 TDE_1893 PF06421 GTP-binding protein LepA C-terminus TDE_1893 PF14492 Elongation Factor G, domain II TDE_1894 PF04060 Putative Fe-S cluster TDE_1894 PF12838 4Fe-4S dicluster domain TDE_1895 PF01926 50S ribosome-binding GTPase TDE_1895 PF07650 KH domain TDE_1896 PF01808 AICARFT/IMPCHase bienzyme TDE_1896 PF02142 MGS-like domain TDE_1897 PF00551 Formyl transferase TDE_1898 PF01043 SecA preprotein cross-linking domain TDE_1898 PF02810 SEC-C motif TDE_1898 PF07516 SecA Wing and Scaffold domain TDE_1898 PF07517 SecA DEAD-like domain TDE_1901 PF00005 ABC transporter TDE_1903 PF13346 TDE_1903 TDE_1906 PF12784 TDE_1906 TDE_1907 PF01648 4'-phosphopantetheinyl transferase superfamily TDE_1908 PF07949 YbbR-like protein TDE_1909 PF02457 DisA bacterial checkpoint controller nucleotide-binding TDE_1910 PF02779 Transketolase, pyrimidine binding domain TDE_1910 PF02780 Transketolase, C-terminal domain TDE_1910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TDE_1912 PF02629 CoA binding domain TDE_1912 PF06971 Putative DNA-binding protein N-terminus TDE_1913 PF10672 S-adenosylmethionine-dependent methyltransferase TDE_1914 PF05491 Holliday junction DNA helicase ruvB C-terminus TDE_1914 PF05496 Holliday junction DNA helicase ruvB N-terminus TDE_1915 PF00465 Iron-containing alcohol dehydrogenase TDE_1916 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TDE_1916 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TDE_1917 PF02348 Cytidylyltransferase TDE_1917 PF13489 Methyltransferase domain TDE_1919 PF13186 Iron-sulfur cluster-binding domain TDE_1922 PF12784 TDE_1922 TDE_1925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TDE_1926 PF07456 TDE_1926 TDE_1927 PF03484 tRNA synthetase B5 domain TDE_1928 PF01261 Xylose isomerase-like TIM barrel TDE_1931 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TDE_1932 PF14734 Domain of unknown function (DUF4469) with IG-like fold TDE_1938 PF04754 TDE_1938 TDE_1943 PF00163 Ribosomal protein S4/S9 N-terminal domain TDE_1943 PF01479 S4 domain TDE_1947 PF02653 TDE_1947 TDE_1948 PF02653 TDE_1948 TDE_1949 PF00005 ABC transporter TDE_1950 PF02608 Basic membrane protein TDE_1951 PF00753 Metallo-beta-lactamase superfamily TDE_1951 PF12706 Beta-lactamase superfamily domain TDE_1952 PF14196 TDE_1952 TDE_1953 PF00440 Bacterial regulatory proteins, tetR family TDE_1954 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TDE_1958 PF13306 Leucine rich repeats (6 copies) TDE_1959 PF15919 TDE_1959 TDE_1961 PF01850 PIN domain TDE_1963 PF00009 Elongation factor Tu GTP binding domain TDE_1963 PF09107 Elongation factor SelB, winged helix TDE_1964 PF01895 PhoU domain TDE_1964 PF02690 TDE_1964 TDE_1965 PF00999 Sodium/hydrogen exchanger family TDE_1966 PF13180 PDZ domain TDE_1966 PF13365 Trypsin-like peptidase domain TDE_1968 PF01728 FtsJ-like methyltransferase TDE_1969 PF00072 Response regulator receiver domain TDE_1969 PF00158 Sigma-54 interaction domain TDE_1969 PF02954 Bacterial regulatory protein, Fis family TDE_1970 PF00512 His Kinase A (phospho-acceptor) domain TDE_1970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_1970 PF08448 PAS fold TDE_1971 PF13177 DNA polymerase III, delta subunit TDE_1973 PF02674 TDE_1973 TDE_1974 PF03033 Glycosyltransferase family 28 N-terminal domain TDE_1974 PF04101 Glycosyltransferase family 28 C-terminal domain TDE_1976 PF12784 TDE_1976 TDE_1977 PF12710 haloacid dehalogenase-like hydrolase TDE_1978 PF05016 Plasmid stabilisation system protein TDE_1983 PF13306 Leucine rich repeats (6 copies) TDE_1986 PF00211 Adenylate and Guanylate cyclase catalytic domain TDE_1986 PF00672 HAMP domain TDE_1989 PF01553 Acyltransferase TDE_1990 PF13307 Helicase C-terminal domain TDE_1991 PF12784 TDE_1991 TDE_1992 PF00691 OmpA family TDE_1993 PF00206 Lyase TDE_1993 PF10415 Fumarase C C-terminus TDE_1995 PF01078 Magnesium chelatase, subunit ChlI TDE_1995 PF13335 TDE_1995 TDE_1995 PF13541 Subunit ChlI of Mg-chelatase TDE_1996 PF13274 TDE_1996 TDE_1998 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TDE_1998 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TDE_1998 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TDE_1998 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TDE_1999 PF00929 Exonuclease TDE_2000 PF00005 ABC transporter TDE_2001 PF01432 Peptidase family M3 TDE_2001 PF08439 Oligopeptidase F TDE_2003 PF12799 Leucine Rich repeats (2 copies) TDE_2005 PF00440 Bacterial regulatory proteins, tetR family TDE_2006 PF03176 MMPL family TDE_2007 PF00005 ABC transporter TDE_2007 PF00664 ABC transporter transmembrane region TDE_2008 PF00005 ABC transporter TDE_2008 PF00664 ABC transporter transmembrane region TDE_2009 PF17131 TDE_2009 TDE_2014 PF12796 Ankyrin repeats (3 copies) TDE_2022 PF12256 Insecticide toxin TcdB middle/N-terminal region TDE_2023 PF13181 Tetratricopeptide repeat TDE_2023 PF13414 TPR repeat TDE_2028 PF00691 OmpA family TDE_2028 PF13750 TDE_2028 TDE_2028 PF13860 FlgD Ig-like domain TDE_2029 PF01026 TatD related DNase TDE_2030 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel TDE_2030 PF05036 Sporulation related domain TDE_2032 PF01278 Omptin family TDE_2033 PF00665 Integrase core domain TDE_2033 PF13384 Homeodomain-like domain TDE_2034 PF00534 Glycosyl transferases group 1 TDE_2034 PF13439 Glycosyltransferase Family 4 TDE_2035 PF00483 Nucleotidyl transferase TDE_2036 PF00004 ATPase family associated with various cellular activities (AAA) TDE_2036 PF02151 UvrB/uvrC motif TDE_2036 PF02861 Clp amino terminal domain TDE_2036 PF07724 AAA domain (Cdc48 subfamily) TDE_2036 PF10431 C-terminal, D2-small domain, of ClpB protein TDE_2037 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain TDE_2038 PF02151 UvrB/uvrC motif TDE_2039 PF02687 TDE_2039 TDE_2039 PF12704 MacB-like periplasmic core domain TDE_2040 PF00005 ABC transporter TDE_2041 PF02687 TDE_2041 TDE_2041 PF12704 MacB-like periplasmic core domain TDE_2043 PF00448 SRP54-type protein, GTPase domain TDE_2049 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TDE_2050 PF14384 TDE_2050 TDE_2051 PF04365 Protein of unknown function (DUF497) TDE_2052 PF00266 Aminotransferase class-V TDE_2053 PF01592 NifU-like N terminal domain TDE_2055 PF09223 YodA lipocalin-like domain TDE_2056 PF09223 YodA lipocalin-like domain TDE_2058 PF10670 TDE_2058 TDE_2061 PF10670 TDE_2061 TDE_2063 PF02421 Ferrous iron transport protein B TDE_2063 PF07664 TDE_2063 TDE_2063 PF07670 Nucleoside recognition TDE_2064 PF04023 FeoA domain TDE_2065 PF04023 FeoA domain TDE_2066 PF02609 Exonuclease VII small subunit TDE_2069 PF01042 Endoribonuclease L-PSP TDE_2073 PF00515 Tetratricopeptide repeat TDE_2073 PF13181 Tetratricopeptide repeat TDE_2073 PF13432 Tetratricopeptide repeat TDE_2073 PF14559 Tetratricopeptide repeat TDE_2074 PF04055 Radical SAM superfamily TDE_2074 PF13394 4Fe-4S single cluster domain TDE_2075 PF00563 EAL domain TDE_2075 PF00990 GGDEF domain TDE_2076 PF13416 Bacterial extracellular solute-binding protein TDE_2078 PF13174 Tetratricopeptide repeat TDE_2078 PF13424 Tetratricopeptide repeat TDE_2079 PF00158 Sigma-54 interaction domain TDE_2079 PF01590 GAF domain TDE_2079 PF02954 Bacterial regulatory protein, Fis family TDE_2080 PF00575 S1 RNA binding domain TDE_2080 PF02224 Cytidylate kinase TDE_2081 PF10646 TDE_2081 TDE_2083 PF01740 STAS domain TDE_2084 PF00588 SpoU rRNA Methylase family TDE_2085 PF00696 Amino acid kinase family TDE_2086 PF00226 DnaJ domain TDE_2087 PF01176 Translation initiation factor 1A / IF-1 TDE_2088 PF01258 Prokaryotic dksA/traR C4-type zinc finger TDE_2089 PF00448 SRP54-type protein, GTPase domain TDE_2089 PF02881 SRP54-type protein, helical bundle domain TDE_2089 PF02978 Signal peptide binding domain TDE_2090 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TDE_2090 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TDE_2091 PF00497 Bacterial extracellular solute-binding proteins, family 3 TDE_2092 PF00497 Bacterial extracellular solute-binding proteins, family 3 TDE_2093 PF01613 Flavin reductase like domain TDE_2095 PF00144 Beta-lactamase TDE_2096 PF07075 Protein of unknown function (DUF1343) TDE_2098 PF12784 TDE_2098 TDE_2101 PF03781 Sulfatase-modifying factor enzyme 1 TDE_2103 PF00535 Glycosyl transferase family 2 TDE_2105 PF14384 TDE_2105 TDE_2106 PF04365 Protein of unknown function (DUF497) TDE_2109 PF00270 DEAD/DEAH box helicase TDE_2109 PF00271 Helicase conserved C-terminal domain TDE_2109 PF03880 DbpA RNA binding domain TDE_2110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TDE_2111 PF14238 TDE_2111 TDE_2112 PF09822 TDE_2112 TDE_2113 PF13346 TDE_2113 TDE_2114 PF00005 ABC transporter TDE_2115 PF07228 Stage II sporulation protein E (SpoIIE) TDE_2117 PF03687 TDE_2117 TDE_2118 PF00521 DNA gyrase/topoisomerase IV, subunit A TDE_2120 PF09338 TDE_2120 TDE_2121 PF02677 TDE_2121 TDE_2122 PF01368 DHH family TDE_2123 PF02617 ATP-dependent Clp protease adaptor protein ClpS TDE_2124 PF00004 ATPase family associated with various cellular activities (AAA) TDE_2124 PF02861 Clp amino terminal domain TDE_2124 PF07724 AAA domain (Cdc48 subfamily) TDE_2124 PF10431 C-terminal, D2-small domain, of ClpB protein TDE_2125 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TDE_2127 PF01850 PIN domain TDE_2128 PF07690 Major Facilitator Superfamily TDE_2131 PF01891 Cobalt uptake substrate-specific transmembrane region TDE_2132 PF00005 ABC transporter TDE_2133 PF02361 Cobalt transport protein TDE_2135 PF12784 TDE_2135 TDE_2136 PF12784 TDE_2136 TDE_2137 PF00207 Alpha-2-macroglobulin family TDE_2137 PF01835 MG2 domain TDE_2137 PF07703 Alpha-2-macroglobulin family N-terminal region TDE_2137 PF10569 Alpha-macro-globulin thiol-ester bond-forming region TDE_2137 PF11974 Alpha-2-macroglobulin MG1 domain TDE_2138 PF12796 Ankyrin repeats (3 copies) TDE_2140 PF00326 Prolyl oligopeptidase family TDE_2140 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TDE_2142 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_2142 PF02743 Cache domain TDE_2143 PF00905 Penicillin binding protein transpeptidase domain TDE_2143 PF00912 Transglycosylase TDE_2143 PF06832 TDE_2143 TDE_2144 PF03313 TDE_2144 TDE_2145 PF03781 Sulfatase-modifying factor enzyme 1 TDE_2146 PF12146 Putative lysophospholipase TDE_2148 PF00691 OmpA family TDE_2149 PF01464 Transglycosylase SLT domain TDE_2149 PF01476 LysM domain TDE_2151 PF02639 TDE_2151 TDE_2152 PF05164 Cell division protein ZapA TDE_2154 PF00453 Ribosomal protein L20 TDE_2155 PF01632 Ribosomal protein L35 TDE_2156 PF00707 Translation initiation factor IF-3, C-terminal domain TDE_2156 PF05198 Translation initiation factor IF-3, N-terminal domain TDE_2157 PF02361 Cobalt transport protein TDE_2158 PF00005 ABC transporter TDE_2159 PF09605 TDE_2159 TDE_2161 PF13302 Acetyltransferase (GNAT) domain TDE_2162 PF01189 NOL1/NOP2/sun family TDE_2163 PF04298 TDE_2163 TDE_2165 PF02492 CobW/HypB/UreG, nucleotide-binding domain TDE_2166 PF01155 Hydrogenase expression/synthesis hypA family TDE_2167 PF00037 4Fe-4S binding domain TDE_2167 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_2167 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TDE_2169 PF12650 TDE_2169 TDE_2171 PF08241 Methyltransferase domain TDE_2173 PF12958 TDE_2173 TDE_2174 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal TDE_2175 PF14202 TDE_2175 TDE_2176 PF00239 Resolvase, N terminal domain TDE_2176 PF07508 Recombinase TDE_2176 PF13408 Recombinase zinc beta ribbon domain TDE_2176 PF14287 TDE_2176 TDE_2179 PF00654 Voltage gated chloride channel TDE_2179 PF02080 TrkA-C domain TDE_2180 PF01926 50S ribosome-binding GTPase TDE_2180 PF10396 GTP-binding protein TrmE N-terminus TDE_2180 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE TDE_2181 PF01569 PAP2 superfamily TDE_2182 PF13200 TDE_2182 TDE_2183 PF14353 TDE_2183 TDE_2185 PF13416 Bacterial extracellular solute-binding protein TDE_2186 PF00501 AMP-binding enzyme TDE_2186 PF13193 AMP-binding enzyme C-terminal domain TDE_2187 PF02195 ParB-like nuclease domain TDE_2189 PF01551 Peptidase family M23 TDE_2190 PF01368 DHH family TDE_2190 PF02272 DHHA1 domain TDE_2191 PF00591 Glycosyl transferase family, a/b domain TDE_2191 PF02885 Glycosyl transferase family, helical bundle domain TDE_2191 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TDE_2192 PF14821 Threonine synthase N terminus TDE_2193 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TDE_2194 PF00155 Aminotransferase class I and II TDE_2195 PF00849 RNA pseudouridylate synthase TDE_2196 PF12784 TDE_2196 TDE_2198 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TDE_2198 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TDE_2198 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TDE_2198 PF10371 Domain of unknown function TDE_2198 PF13484 TDE_2198 TDE_2198 PF17147 TDE_2198 TDE_2199 PF01177 Asp/Glu/Hydantoin racemase TDE_2200 PF01053 Cys/Met metabolism PLP-dependent enzyme TDE_2202 PF00892 EamA-like transporter family TDE_2204 PF03553 TDE_2204 TDE_2204 PF13726 TDE_2204 TDE_2205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TDE_2205 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_2206 PF01989 Protein of unknown function DUF126 TDE_2207 PF04412 TDE_2207 TDE_2208 PF01784 NIF3 (NGG1p interacting factor 3) TDE_2209 PF02655 ATP-grasp domain TDE_2210 PF07602 TDE_2210 TDE_2212 PF00288 GHMP kinases N terminal domain TDE_2212 PF08544 GHMP kinases C terminal TDE_2212 PF10509 Galactokinase galactose-binding signature TDE_2213 PF07927 YcfA-like protein TDE_2214 PF05534 TDE_2214 TDE_2215 PF02653 TDE_2215 TDE_2216 PF00005 ABC transporter TDE_2217 PF13407 Periplasmic binding protein domain TDE_2218 PF01643 Acyl-ACP thioesterase TDE_2220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TDE_2220 PF03129 Anticodon binding domain TDE_2220 PF04073 Aminoacyl-tRNA editing domain TDE_2222 PF01553 Acyltransferase TDE_2225 PF13279 Thioesterase-like superfamily TDE_2226 PF01297 Periplasmic solute binding protein family TDE_2227 PF07099 TDE_2227 TDE_2228 PF01546 Peptidase family M20/M25/M40 TDE_2228 PF07687 Peptidase dimerisation domain TDE_2229 PF08843 Nucleotidyl transferase of unknown function (DUF1814) TDE_2232 PF00005 ABC transporter TDE_2233 PF01032 FecCD transport family TDE_2234 PF01497 Periplasmic binding protein TDE_2235 PF05034 Methylaspartate ammonia-lyase N-terminus TDE_2235 PF07476 Methylaspartate ammonia-lyase C-terminus TDE_2236 PF06368 Methylaspartate mutase E chain (MutE) TDE_2239 PF03781 Sulfatase-modifying factor enzyme 1 TDE_2241 PF00535 Glycosyl transferase family 2 TDE_2243 PF03932 CutC family TDE_2245 PF00204 DNA gyrase B TDE_2245 PF00986 DNA gyrase B subunit, carboxyl terminus TDE_2245 PF01751 Toprim domain TDE_2245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_2247 PF02452 PemK-like protein TDE_2248 PF00899 ThiF family TDE_2249 PF00953 Glycosyl transferase family 4 TDE_2250 PF04018 TDE_2250 TDE_2251 PF00860 Permease family TDE_2252 PF07927 YcfA-like protein TDE_2253 PF15919 TDE_2253 TDE_2255 PF13529 Peptidase_C39 like family TDE_2256 PF07907 TDE_2256 TDE_2257 PF00149 Calcineurin-like phosphoesterase TDE_2257 PF02872 5'-nucleotidase, C-terminal domain TDE_2258 PF13306 Leucine rich repeats (6 copies) TDE_2259 PF14734 Domain of unknown function (DUF4469) with IG-like fold TDE_2259 PF14848 DNA-binding domain TDE_2262 PF01136 TDE_2262 TDE_2263 PF07859 alpha/beta hydrolase fold TDE_2264 PF00005 ABC transporter TDE_2264 PF00664 ABC transporter transmembrane region TDE_2266 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TDE_2267 PF00570 HRDC domain TDE_2269 PF03781 Sulfatase-modifying factor enzyme 1 TDE_2270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_2270 PF02743 Cache domain TDE_2271 PF01725 Ham1 family TDE_2274 PF09986 TDE_2274 TDE_2275 PF01416 tRNA pseudouridine synthase TDE_2277 PF02146 Sir2 family TDE_2279 PF08668 HDOD domain TDE_2280 PF01464 Transglycosylase SLT domain TDE_2281 PF01476 LysM domain TDE_2282 PF00152 tRNA synthetases class II (D, K and N) TDE_2283 PF02687 TDE_2283 TDE_2283 PF12704 MacB-like periplasmic core domain TDE_2284 PF00529 HlyD family secretion protein TDE_2284 PF16576 TDE_2284 TDE_2286 PF03819 MazG nucleotide pyrophosphohydrolase domain TDE_2287 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TDE_2287 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TDE_2289 PF00485 Phosphoribulokinase / Uridine kinase family TDE_2290 PF02559 CarD-like/TRCF domain TDE_2291 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TDE_2292 PF02542 YgbB family TDE_2294 PF13419 Haloacid dehalogenase-like hydrolase TDE_2295 PF00924 Mechanosensitive ion channel TDE_2297 PF00515 Tetratricopeptide repeat TDE_2297 PF07720 Tetratricopeptide repeat TDE_2297 PF13176 Tetratricopeptide repeat TDE_2298 PF08544 GHMP kinases C terminal TDE_2298 PF10509 Galactokinase galactose-binding signature TDE_2299 PF00795 Carbon-nitrogen hydrolase TDE_2300 PF13180 PDZ domain TDE_2300 PF13365 Trypsin-like peptidase domain TDE_2301 PF01312 FlhB HrpN YscU SpaS Family TDE_2302 PF11871 TDE_2302 TDE_2302 PF13487 HD domain TDE_2303 PF02021 Uncharacterised protein family UPF0102 TDE_2307 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TDE_2307 PF02403 Seryl-tRNA synthetase N-terminal domain TDE_2309 PF00158 Sigma-54 interaction domain TDE_2309 PF13185 GAF domain TDE_2315 PF01168 Alanine racemase, N-terminal domain TDE_2317 PF03006 TDE_2317 TDE_2318 PF01476 LysM domain TDE_2318 PF01551 Peptidase family M23 TDE_2320 PF04542 Sigma-70 region 2 TDE_2320 PF08281 Sigma-70, region 4 TDE_2322 PF03748 TDE_2322 TDE_2323 PF00924 Mechanosensitive ion channel TDE_2324 PF00072 Response regulator receiver domain TDE_2324 PF00196 Bacterial regulatory proteins, luxR family TDE_2326 PF13500 AAA domain TDE_2327 PF00004 ATPase family associated with various cellular activities (AAA) TDE_2327 PF02861 Clp amino terminal domain TDE_2327 PF07724 AAA domain (Cdc48 subfamily) TDE_2327 PF10431 C-terminal, D2-small domain, of ClpB protein TDE_2328 PF03806 TDE_2328 TDE_2333 PF02698 DUF218 domain TDE_2335 PF13245 Part of AAA domain TDE_2335 PF13361 UvrD-like helicase C-terminal domain TDE_2336 PF00375 Sodium:dicarboxylate symporter family TDE_2337 PF02073 Thermophilic metalloprotease (M29) TDE_2339 PF00133 tRNA synthetases class I (I, L, M and V) TDE_2339 PF08264 Anticodon-binding domain of tRNA TDE_2339 PF09334 tRNA synthetases class I (M) TDE_2339 PF13603 Leucyl-tRNA synthetase, Domain 2 TDE_2340 PF04205 FMN-binding domain TDE_2341 PF02163 Peptidase family M50 TDE_2341 PF13180 PDZ domain TDE_2342 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TDE_2342 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal TDE_2342 PF13288 DXP reductoisomerase C-terminal domain TDE_2343 PF01148 Cytidylyltransferase family TDE_2344 PF01255 Putative undecaprenyl diphosphate synthase TDE_2345 PF01765 Ribosome recycling factor TDE_2346 PF00889 Elongation factor TS TDE_2347 PF00318 Ribosomal protein S2 TDE_2348 PF02545 Maf-like protein TDE_2349 PF13646 HEAT repeats TDE_2352 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TDE_2353 PF00669 Bacterial flagellin N-terminal helical region TDE_2353 PF00700 Bacterial flagellin C-terminal helical region TDE_2353 PF07196 Flagellin hook IN motif TDE_2354 PF02623 FliW protein TDE_2355 PF02599 Global regulator protein family TDE_2356 PF01497 Periplasmic binding protein TDE_2357 PF01032 FecCD transport family TDE_2358 PF01208 Uroporphyrinogen decarboxylase (URO-D) TDE_2359 PF02734 DAK2 domain TDE_2360 PF02733 Dak1 domain TDE_2361 PF13458 Periplasmic binding protein TDE_2362 PF14196 TDE_2362 TDE_2363 PF00005 ABC transporter TDE_2364 PF00005 ABC transporter TDE_2364 PF12399 Branched-chain amino acid ATP-binding cassette transporter TDE_2365 PF02653 TDE_2365 TDE_2366 PF02653 TDE_2366 TDE_2367 PF00392 Bacterial regulatory proteins, gntR family TDE_2367 PF07729 FCD domain TDE_2368 PF04073 Aminoacyl-tRNA editing domain TDE_2369 PF00578 AhpC/TSA family TDE_2371 PF00037 4Fe-4S binding domain TDE_2371 PF12801 TDE_2371 TDE_2372 PF08534 Redoxin TDE_2373 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TDE_2374 PF03602 Conserved hypothetical protein 95 TDE_2378 PF00005 ABC transporter TDE_2379 PF12698 ABC-2 family transporter protein TDE_2380 PF12698 ABC-2 family transporter protein TDE_2381 PF07730 Histidine kinase TDE_2382 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TDE_2383 PF02654 TDE_2383 TDE_2384 PF00300 Histidine phosphatase superfamily (branch 1) TDE_2385 PF01820 D-ala D-ala ligase N-terminus TDE_2385 PF07478 D-ala D-ala ligase C-terminus TDE_2387 PF02446 4-alpha-glucanotransferase TDE_2388 PF00574 Clp protease TDE_2389 PF03186 TDE_2389 TDE_2391 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TDE_2391 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TDE_2395 PF01424 R3H domain TDE_2395 PF13083 KH domain TDE_2395 PF14804 Jag N-terminus TDE_2396 PF02096 60Kd inner membrane protein TDE_2396 PF14849 YidC periplasmic domain TDE_2398 PF01809 TDE_2398 TDE_2399 PF00825 Ribonuclease P TDE_2400 PF00468 Ribosomal protein L34 TDE_2401 PF01370 NAD dependent epimerase/dehydratase family TDE_2402 PF04055 Radical SAM superfamily TDE_2403 PF00753 Metallo-beta-lactamase superfamily TDE_2404 PF00309 TDE_2404 TDE_2404 PF04552 Sigma-54, DNA binding domain TDE_2404 PF04963 Sigma-54 factor, core binding domain TDE_2405 PF01523 Putative modulator of DNA gyrase TDE_2406 PF01523 Putative modulator of DNA gyrase TDE_2407 PF00156 Phosphoribosyl transferase domain TDE_2407 PF13537 Glutamine amidotransferase domain TDE_2409 PF03729 TDE_2409 TDE_2410 PF00155 Aminotransferase class I and II TDE_2411 PF00343 Carbohydrate phosphorylase TDE_2412 PF00583 Acetyltransferase (GNAT) family TDE_2415 PF12952 TDE_2415 TDE_2417 PF12900 Pyridoxamine 5'-phosphate oxidase TDE_2418 PF04191 Phospholipid methyltransferase TDE_2419 PF10988 Protein of unknown function (DUF2807) TDE_2420 PF00623 RNA polymerase Rpb1, domain 2 TDE_2420 PF04983 RNA polymerase Rpb1, domain 3 TDE_2420 PF04997 RNA polymerase Rpb1, domain 1 TDE_2420 PF04998 RNA polymerase Rpb1, domain 5 TDE_2420 PF05000 RNA polymerase Rpb1, domain 4 TDE_2421 PF00562 RNA polymerase Rpb2, domain 6 TDE_2421 PF04560 RNA polymerase Rpb2, domain 7 TDE_2421 PF04561 RNA polymerase Rpb2, domain 2 TDE_2421 PF04563 RNA polymerase beta subunit TDE_2421 PF04565 RNA polymerase Rpb2, domain 3 TDE_2421 PF10385 RNA polymerase beta subunit external 1 domain TDE_2422 PF00542 Ribosomal protein L7/L12 C-terminal domain TDE_2422 PF16320 TDE_2422 TDE_2423 PF00466 Ribosomal protein L10 TDE_2424 PF00687 Ribosomal protein L1p/L10e family TDE_2425 PF00298 Ribosomal protein L11, RNA binding domain TDE_2425 PF03946 Ribosomal protein L11, N-terminal domain TDE_2426 PF00467 KOW motif TDE_2426 PF02357 Transcription termination factor nusG TDE_2427 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TDE_2428 PF00471 Ribosomal protein L33 TDE_2429 PF02321 Outer membrane efflux protein TDE_2430 PF13437 HlyD family secretion protein TDE_2430 PF13533 Biotin-lipoyl like TDE_2431 PF00005 ABC transporter TDE_2431 PF00664 ABC transporter transmembrane region TDE_2431 PF03412 Peptidase C39 family TDE_2434 PF01522 Polysaccharide deacetylase TDE_2436 PF12784 TDE_2436 TDE_2437 PF00027 Cyclic nucleotide-binding domain TDE_2438 PF02254 TrkA-N domain TDE_2438 PF07885 Ion channel TDE_2439 PF05343 M42 glutamyl aminopeptidase TDE_2440 PF00005 ABC transporter TDE_2440 PF00664 ABC transporter transmembrane region TDE_2442 PF13306 Leucine rich repeats (6 copies) TDE_2445 PF01381 Helix-turn-helix TDE_2446 PF00390 Malic enzyme, N-terminal domain TDE_2446 PF03949 Malic enzyme, NAD binding domain TDE_2447 PF01202 Shikimate kinase TDE_2449 PF01871 AMMECR1 TDE_2449 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TDE_2450 PF00023 Ankyrin repeat TDE_2450 PF12796 Ankyrin repeats (3 copies) TDE_2451 PF02547 Queuosine biosynthesis protein TDE_2453 PF09346 SMI1 / KNR4 family (SUKH-1) TDE_2457 PF13306 Leucine rich repeats (6 copies) TDE_2460 PF00266 Aminotransferase class-V TDE_2463 PF04205 FMN-binding domain TDE_2465 PF11823 TDE_2465 TDE_2466 PF01206 Sulfurtransferase TusA TDE_2467 PF04143 TDE_2467 TDE_2469 PF00349 Hexokinase TDE_2469 PF03727 Hexokinase TDE_2470 PF00438 S-adenosylmethionine synthetase, N-terminal domain TDE_2470 PF02772 S-adenosylmethionine synthetase, central domain TDE_2470 PF02773 S-adenosylmethionine synthetase, C-terminal domain TDE_2471 PF00892 EamA-like transporter family TDE_2472 PF00665 Integrase core domain TDE_2472 PF13384 Homeodomain-like domain TDE_2473 PF01165 Ribosomal protein S21 TDE_2474 PF13302 Acetyltransferase (GNAT) domain TDE_2475 PF01554 MatE TDE_2476 PF00696 Amino acid kinase family TDE_2477 PF03841 L-seryl-tRNA selenium transferase TDE_2478 PF01541 GIY-YIG catalytic domain TDE_2478 PF02151 UvrB/uvrC motif TDE_2478 PF08459 UvrC Helix-hairpin-helix N-terminal TDE_2479 PF01627 Hpt domain TDE_2480 PF00183 Hsp90 protein TDE_2480 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_2483 PF04536 TLP18 TDE_2485 PF13240 TDE_2485 TDE_2485 PF13421 TDE_2485 TDE_2486 PF00882 Zinc dependent phospholipase C TDE_2487 PF13673 Acetyltransferase (GNAT) domain TDE_2489 PF00472 RF-1 domain TDE_2489 PF03462 PCRF domain TDE_2490 PF00270 DEAD/DEAH box helicase TDE_2490 PF00271 Helicase conserved C-terminal domain TDE_2491 PF03167 Uracil DNA glycosylase superfamily TDE_2492 PF01145 SPFH domain / Band 7 family TDE_2493 PF03781 Sulfatase-modifying factor enzyme 1 TDE_2495 PF03781 Sulfatase-modifying factor enzyme 1 TDE_2496 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_2498 PF00753 Metallo-beta-lactamase superfamily TDE_2499 PF13649 Methyltransferase domain TDE_2500 PF01965 DJ-1/PfpI family TDE_2501 PF00072 Response regulator receiver domain TDE_2502 PF00072 Response regulator receiver domain TDE_2502 PF00512 His Kinase A (phospho-acceptor) domain TDE_2502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TDE_2503 PF04748 Divergent polysaccharide deacetylase TDE_2504 PF00814 Glycoprotease family TDE_2506 PF04055 Radical SAM superfamily TDE_2506 PF13353 4Fe-4S single cluster domain TDE_2509 PF12833 Helix-turn-helix domain TDE_2510 PF00005 ABC transporter TDE_2510 PF00664 ABC transporter transmembrane region TDE_2511 PF00005 ABC transporter TDE_2511 PF00664 ABC transporter transmembrane region TDE_2512 PF00171 Aldehyde dehydrogenase family TDE_2513 PF02527 rRNA small subunit methyltransferase G TDE_2514 PF12850 Calcineurin-like phosphoesterase superfamily domain TDE_2515 PF03781 Sulfatase-modifying factor enzyme 1 TDE_2517 PF13481 AAA domain TDE_2517 PF13541 Subunit ChlI of Mg-chelatase TDE_2518 PF10609 ParA/MinD ATPase like TDE_2519 PF08011 TDE_2519 TDE_2519 PF09820 TDE_2519 TDE_2520 PF13650 Aspartyl protease TDE_2522 PF00005 ABC transporter TDE_2524 PF00005 ABC transporter TDE_2525 PF01973 TDE_2525 TDE_2527 PF04536 TLP18 TDE_2529 PF03083 Sugar efflux transporter for intercellular exchange TDE_2530 PF04055 Radical SAM superfamily TDE_2532 PF01850 PIN domain TDE_2533 PF07690 Major Facilitator Superfamily TDE_2534 PF00633 Helix-hairpin-helix motif TDE_2534 PF00730 HhH-GPD superfamily base excision DNA repair protein TDE_2534 PF10576 Iron-sulfur binding domain of endonuclease III TDE_2535 PF00224 Pyruvate kinase, barrel domain TDE_2535 PF02887 Pyruvate kinase, alpha/beta domain TDE_2536 PF01936 NYN domain TDE_2536 PF12872 OST-HTH/LOTUS domain TDE_2538 PF13026 Protein of unknown function (DUF3887) TDE_2539 PF01875 Memo-like protein TDE_2540 PF11369 TDE_2540 TDE_2541 PF01728 FtsJ-like methyltransferase TDE_2546 PF02588 TDE_2546 TDE_2546 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TDE_2549 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_2549 PF00672 HAMP domain TDE_2549 PF02743 Cache domain TDE_2550 PF01863 Protein of unknown function DUF45 TDE_2551 PF10974 TDE_2551 TDE_2552 PF00005 ABC transporter TDE_2552 PF00664 ABC transporter transmembrane region TDE_2553 PF01921 tRNA synthetases class I (K) TDE_2554 PF01430 Hsp33 protein TDE_2555 PF02570 Precorrin-8X methylmutase TDE_2556 PF12784 TDE_2556 TDE_2558 PF00005 ABC transporter TDE_2558 PF00664 ABC transporter transmembrane region TDE_2559 PF00005 ABC transporter TDE_2559 PF00664 ABC transporter transmembrane region TDE_2560 PF12784 TDE_2560 TDE_2561 PF00005 ABC transporter TDE_2562 PF00950 TDE_2562 TDE_2564 PF02452 PemK-like protein TDE_2568 PF02568 Thiamine biosynthesis protein (ThiI) TDE_2568 PF02926 THUMP domain TDE_2569 PF00793 DAHP synthetase I family TDE_2570 PF00075 RNase H TDE_2571 PF02229 Transcriptional Coactivator p15 (PC4) TDE_2572 PF01066 CDP-alcohol phosphatidyltransferase TDE_2573 PF00342 Phosphoglucose isomerase TDE_2574 PF01926 50S ribosome-binding GTPase TDE_2575 PF05962 HutD TDE_2576 PF00849 RNA pseudouridylate synthase TDE_2577 PF13470 TDE_2577 TDE_2579 PF00270 DEAD/DEAH box helicase TDE_2579 PF00271 Helicase conserved C-terminal domain TDE_2579 PF17191 TDE_2579 TDE_2580 PF00990 GGDEF domain TDE_2582 PF00990 GGDEF domain TDE_2584 PF03577 TDE_2584 TDE_2585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_2585 PF07695 TDE_2585 TDE_2586 PF12169 DNA polymerase III subunits gamma and tau domain III TDE_2586 PF13177 DNA polymerase III, delta subunit TDE_2587 PF03372 Endonuclease/Exonuclease/phosphatase family TDE_2588 PF00665 Integrase core domain TDE_2589 PF02127 Aminopeptidase I zinc metalloprotease (M18) TDE_2591 PF00581 Rhodanese-like domain TDE_2592 PF03880 DbpA RNA binding domain TDE_2593 PF00158 Sigma-54 interaction domain TDE_2596 PF13525 Outer membrane lipoprotein TDE_2597 PF00834 Ribulose-phosphate 3 epimerase family TDE_2599 PF02223 Thymidylate kinase TDE_2601 PF01103 Surface antigen TDE_2601 PF07244 Surface antigen variable number repeat TDE_2602 PF03938 Outer membrane protein (OmpH-like) TDE_2603 PF00488 MutS domain V TDE_2603 PF01624 MutS domain I TDE_2603 PF05188 MutS domain II TDE_2603 PF05190 MutS family domain IV TDE_2603 PF05192 MutS domain III TDE_2604 PF03572 Peptidase family S41 TDE_2605 PF00300 Histidine phosphatase superfamily (branch 1) TDE_2606 PF01175 Urocanase TDE_2606 PF17391 TDE_2606 TDE_2606 PF17392 TDE_2606 TDE_2607 PF03548 Outer membrane lipoprotein carrier protein LolA TDE_2608 PF13413 Helix-turn-helix domain TDE_2609 PF00919 Uncharacterized protein family UPF0004 TDE_2609 PF04055 Radical SAM superfamily TDE_2612 PF13539 D-alanyl-D-alanine carboxypeptidase TDE_2613 PF10107 TDE_2613 TDE_2614 PF02424 ApbE family TDE_2615 PF01252 TDE_2615 TDE_2616 PF00027 Cyclic nucleotide-binding domain TDE_2616 PF13545 Crp-like helix-turn-helix domain TDE_2617 PF00027 Cyclic nucleotide-binding domain TDE_2617 PF13432 Tetratricopeptide repeat TDE_2618 PF02811 PHP domain TDE_2619 PF05958 tRNA (Uracil-5-)-methyltransferase TDE_2622 PF00005 ABC transporter TDE_2623 PF02361 Cobalt transport protein TDE_2624 PF09605 TDE_2624 TDE_2625 PF00005 ABC transporter TDE_2625 PF00664 ABC transporter transmembrane region TDE_2626 PF00005 ABC transporter TDE_2626 PF00664 ABC transporter transmembrane region TDE_2627 PF00440 Bacterial regulatory proteins, tetR family TDE_2629 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TDE_2630 PF00528 Binding-protein-dependent transport system inner membrane component TDE_2631 PF00528 Binding-protein-dependent transport system inner membrane component TDE_2632 PF00005 ABC transporter TDE_2632 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TDE_2634 PF13649 Methyltransferase domain TDE_2635 PF13420 Acetyltransferase (GNAT) domain TDE_2637 PF13563 2'-5' RNA ligase superfamily TDE_2639 PF01432 Peptidase family M3 TDE_2639 PF08439 Oligopeptidase F TDE_2640 PF04389 Peptidase family M28 TDE_2641 PF02661 Fic/DOC family TDE_2641 PF13412 Winged helix-turn-helix DNA-binding TDE_2643 PF01266 FAD dependent oxidoreductase TDE_2643 PF04324 BFD-like [2Fe-2S] binding domain TDE_2644 PF07992 Pyridine nucleotide-disulphide oxidoreductase TDE_2645 PF07892 Protein of unknown function (DUF1667) TDE_2646 PF00005 ABC transporter TDE_2647 PF03099 Biotin/lipoate A/B protein ligase family TDE_2647 PF10437 Bacterial lipoate protein ligase C-terminus TDE_2649 PF00005 ABC transporter TDE_2650 PF00392 Bacterial regulatory proteins, gntR family TDE_2651 PF00005 ABC transporter TDE_2652 PF06182 TDE_2652 TDE_2653 PF06182 TDE_2653 TDE_2654 PF07690 Major Facilitator Superfamily TDE_2656 PF06180 Cobalt chelatase (CbiK) TDE_2657 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TDE_2658 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TDE_2658 PF07685 CobB/CobQ-like glutamine amidotransferase domain TDE_2659 PF01590 GAF domain TDE_2659 PF01966 HD domain TDE_2660 PF12773 TDE_2660 TDE_2661 PF09723 TDE_2661 TDE_2663 PF00133 tRNA synthetases class I (I, L, M and V) TDE_2663 PF08264 Anticodon-binding domain of tRNA TDE_2665 PF00478 IMP dehydrogenase / GMP reductase domain TDE_2666 PF00795 Carbon-nitrogen hydrolase TDE_2668 PF00464 Serine hydroxymethyltransferase TDE_2669 PF01066 CDP-alcohol phosphatidyltransferase TDE_2670 PF00953 Glycosyl transferase family 4 TDE_2671 PF13598 TDE_2671 TDE_2672 PF00515 Tetratricopeptide repeat TDE_2672 PF04471 Restriction endonuclease TDE_2672 PF13174 Tetratricopeptide repeat TDE_2673 PF10895 TDE_2673 TDE_2674 PF10895 TDE_2674 TDE_2675 PF09924 Uncharacterized conserved protein (DUF2156) TDE_2676 PF14821 Threonine synthase N terminus TDE_2678 PF00128 Alpha amylase, catalytic domain TDE_2679 PF14257 TDE_2679 TDE_2682 PF03961 TDE_2682 TDE_2682 PF14804 Jag N-terminus TDE_2683 PF04539 Sigma-70 region 3 TDE_2683 PF04542 Sigma-70 region 2 TDE_2683 PF04545 Sigma-70, region 4 TDE_2685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TDE_2686 PF00448 SRP54-type protein, GTPase domain TDE_2687 PF00155 Aminotransferase class I and II TDE_2689 PF12784 TDE_2689 TDE_2692 PF00117 Glutamine amidotransferase class-I TDE_2692 PF06418 CTP synthase N-terminus TDE_2693 PF12796 Ankyrin repeats (3 copies) TDE_2693 PF13637 Ankyrin repeats (many copies) TDE_2695 PF01272 Transcription elongation factor, GreA/GreB, C-term TDE_2695 PF03449 Transcription elongation factor, N-terminal TDE_2697 PF02544 TDE_2697 TDE_2698 PF13360 PQQ-like domain TDE_2699 PF05262 TDE_2699 TDE_2700 PF03390 TDE_2700 TDE_2703 PF17131 TDE_2703 TDE_2704 PF03176 MMPL family TDE_2705 PF12762 TDE_2705 TDE_2706 PF13347 MFS/sugar transport protein TDE_2707 PF12784 TDE_2707 TDE_2710 PF01554 MatE TDE_2711 PF12784 TDE_2711 TDE_2713 PF00588 SpoU rRNA Methylase family TDE_2713 PF08032 RNA 2'-O ribose methyltransferase substrate binding TDE_2714 PF03781 Sulfatase-modifying factor enzyme 1 TDE_2716 PF13419 Haloacid dehalogenase-like hydrolase TDE_2718 PF00571 CBS domain TDE_2718 PF01769 Divalent cation transporter TDE_2718 PF03448 MgtE intracellular N domain TDE_2719 PF12784 TDE_2719 TDE_2720 PF04452 RNA methyltransferase TDE_2721 PF04851 Type III restriction enzyme, res subunit TDE_2721 PF13625 TDE_2721 TDE_2721 PF16203 TDE_2721 TDE_2722 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TDE_2722 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TDE_2723 PF00156 Phosphoribosyl transferase domain TDE_2723 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TDE_2725 PF00027 Cyclic nucleotide-binding domain TDE_2725 PF00990 GGDEF domain TDE_2726 PF00027 Cyclic nucleotide-binding domain TDE_2726 PF00990 GGDEF domain TDE_2727 PF03193 Protein of unknown function, DUF258 TDE_2729 PF07947 TDE_2729 TDE_2730 PF01026 TatD related DNase TDE_2731 PF01207 Dihydrouridine synthase (Dus) TDE_2734 PF14734 Domain of unknown function (DUF4469) with IG-like fold TDE_2734 PF14848 DNA-binding domain TDE_2735 PF13306 Leucine rich repeats (6 copies) TDE_2737 PF13306 Leucine rich repeats (6 copies) TDE_2738 PF01432 Peptidase family M3 TDE_2739 PF00892 EamA-like transporter family TDE_2740 PF01420 Type I restriction modification DNA specificity domain TDE_2741 PF14559 Tetratricopeptide repeat TDE_2742 PF00589 Phage integrase family TDE_2743 PF01420 Type I restriction modification DNA specificity domain TDE_2744 PF01420 Type I restriction modification DNA specificity domain TDE_2745 PF02661 Fic/DOC family TDE_2746 PF02384 N-6 DNA Methylase TDE_2746 PF12161 HsdM N-terminal domain TDE_2747 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TDE_2747 PF04851 Type III restriction enzyme, res subunit TDE_2747 PF08463 TDE_2747 TDE_2748 PF13673 Acetyltransferase (GNAT) domain TDE_2749 PF05534 TDE_2749 TDE_2750 PF01926 50S ribosome-binding GTPase TDE_2750 PF13167 TDE_2750 TDE_2750 PF16360 TDE_2750 TDE_2752 PF00462 Glutaredoxin TDE_2753 PF01476 LysM domain TDE_2753 PF01551 Peptidase family M23 TDE_2754 PF02423 Ornithine cyclodeaminase/mu-crystallin family TDE_2756 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TDE_2757 PF01909 Nucleotidyltransferase domain TDE_2758 PF01934 Protein of unknown function DUF86 TDE_2760 PF00813 TDE_2760 TDE_2761 PF04347 TDE_2761 TDE_2762 PF01052 Surface presentation of antigens (SPOA) TDE_2763 PF01052 Surface presentation of antigens (SPOA) TDE_2763 PF02154 Flagellar motor switch protein FliM TDE_2764 PF03748 TDE_2764 TDE_2765 PF00691 OmpA family TDE_2765 PF13677 TDE_2765 TDE_2766 PF01618 TDE_2766 TDE_2767 PF06289 TDE_2767 TDE_2768 PF00460 Flagella basal body rod protein TDE_2768 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TDE_2768 PF07559 Flagellar basal body protein FlaE TDE_2769 PF03963 TDE_2769 TDE_2770 PF02120 Flagellar hook-length control protein FliK TDE_2771 PF12784 TDE_2771 TDE_2775 PF14133 TDE_2775 TDE_2776 PF00561 alpha/beta hydrolase fold TDE_2777 PF07224 Chlorophyllase TDE_2778 PF04024 TDE_2778 TDE_2781 PF00005 ABC transporter TDE_2781 PF00664 ABC transporter transmembrane region TDE_2782 PF00005 ABC transporter TDE_2782 PF00664 ABC transporter transmembrane region TDE_2783 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TDE_2783 PF00672 HAMP domain TDE_2783 PF02743 Cache domain TDE_2784 PF17239 TDE_2784 TDE_2785 PF02325 TDE_2785 TDE_2786 PF02811 PHP domain TDE_2786 PF07733 Bacterial DNA polymerase III alpha subunit TDE_2786 PF14579 Helix-hairpin-helix motif