TDE_0386 14abca0cbab0e02e679ba1d2168e6ae4 338 SUPERFAMILY SSF53850 41 329 3.26E-68 T 12-10-2018 TDE_0386 14abca0cbab0e02e679ba1d2168e6ae4 338 Gene3D G3DSA:3.40.190.10 42 304 7.3E-85 T 12-10-2018 TDE_0386 14abca0cbab0e02e679ba1d2168e6ae4 338 PIRSF PIRSF002825 1 334 2.0E-81 T 12-10-2018 IPR026045 Ferric binding protein TDE_0386 14abca0cbab0e02e679ba1d2168e6ae4 338 Gene3D G3DSA:3.40.190.10 132 317 7.3E-85 T 12-10-2018 TDE_0386 14abca0cbab0e02e679ba1d2168e6ae4 338 Pfam PF13343 Bacterial extracellular solute-binding protein 79 289 2.7E-35 T 12-10-2018 TDE_0038 105ea287c69fa9a1e76f57ce6f9c4cc0 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 243 2.6E-53 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TDE_0038 105ea287c69fa9a1e76f57ce6f9c4cc0 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site TDE_0038 105ea287c69fa9a1e76f57ce6f9c4cc0 411 Gene3D G3DSA:3.40.47.10 253 399 2.9E-51 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 TDE_0038 105ea287c69fa9a1e76f57ce6f9c4cc0 411 PIRSF PIRSF000447 1 411 1.2E-162 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TDE_0038 105ea287c69fa9a1e76f57ce6f9c4cc0 411 Gene3D G3DSA:3.40.47.10 1 251 6.1E-89 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 TDE_0038 105ea287c69fa9a1e76f57ce6f9c4cc0 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 408 3.8E-174 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TDE_0038 105ea287c69fa9a1e76f57ce6f9c4cc0 411 SUPERFAMILY SSF53901 2 364 1.61E-73 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 TDE_0038 105ea287c69fa9a1e76f57ce6f9c4cc0 411 SMART SM00825 Beta-ketoacyl synthase 4 380 1.6E-12 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TDE_0038 105ea287c69fa9a1e76f57ce6f9c4cc0 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 251 365 4.6E-38 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TDE_0190 5d3e1360599639daa64dcec3e1afd6e2 295 SUPERFAMILY SSF103481 42 141 1.2E-11 T 12-10-2018 TDE_0190 5d3e1360599639daa64dcec3e1afd6e2 295 SUPERFAMILY SSF103481 186 283 3.01E-16 T 12-10-2018 TDE_0190 5d3e1360599639daa64dcec3e1afd6e2 295 Pfam PF00892 EamA-like transporter family 8 139 4.7E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_0190 5d3e1360599639daa64dcec3e1afd6e2 295 Pfam PF00892 EamA-like transporter family 151 281 5.1E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_0008 2f1e267708473ff0fe3762d930881486 891 SUPERFAMILY SSF56784 453 776 1.75E-54 T 12-10-2018 IPR036412 HAD-like superfamily TDE_0008 2f1e267708473ff0fe3762d930881486 891 SUPERFAMILY SSF55008 3 71 8.25E-19 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TDE_0008 2f1e267708473ff0fe3762d930881486 891 Gene3D G3DSA:3.30.70.100 2 71 3.1E-21 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 SUPERFAMILY SSF81665 223 751 8.89E-15 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TDE_0008 2f1e267708473ff0fe3762d930881486 891 ProSitePatterns PS01047 Heavy-metal-associated domain. 833 861 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TDE_0008 2f1e267708473ff0fe3762d930881486 891 Gene3D G3DSA:3.40.1110.10 466 601 1.7E-84 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TDE_0008 2f1e267708473ff0fe3762d930881486 891 Gene3D G3DSA:3.40.50.1000 436 720 1.7E-84 T 12-10-2018 IPR023214 HAD superfamily TDE_0008 2f1e267708473ff0fe3762d930881486 891 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 227 751 9.6E-90 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TDE_0008 2f1e267708473ff0fe3762d930881486 891 SUPERFAMILY SSF55008 824 891 1.57E-16 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TDE_0008 2f1e267708473ff0fe3762d930881486 891 Gene3D G3DSA:3.30.70.100 814 891 1.1E-17 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 179 778 1.0E-186 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TDE_0008 2f1e267708473ff0fe3762d930881486 891 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 831 891 3.4E-13 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 TDE_0008 2f1e267708473ff0fe3762d930881486 891 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 4 67 2.9E-11 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 TDE_0008 2f1e267708473ff0fe3762d930881486 891 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 217 778 3.0E-168 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00943 Copper-transporting ATPase signature 48 68 1.7E-7 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00943 Copper-transporting ATPase signature 703 717 1.7E-7 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00943 Copper-transporting ATPase signature 646 663 1.7E-7 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00943 Copper-transporting ATPase signature 378 392 1.7E-7 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 Pfam PF00702 haloacid dehalogenase-like hydrolase 452 683 5.6E-38 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 457 463 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TDE_0008 2f1e267708473ff0fe3762d930881486 891 Gene3D G3DSA:2.70.150.20 248 360 6.1E-42 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 Pfam PF00403 Heavy-metal-associated domain 7 66 2.5E-14 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TDE_0008 2f1e267708473ff0fe3762d930881486 891 Pfam PF00403 Heavy-metal-associated domain 830 889 8.4E-14 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 692 704 3.1E-28 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 616 626 3.1E-28 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 669 688 3.1E-28 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.1E-28 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 455 469 3.1E-28 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 605 3.1E-28 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 SUPERFAMILY SSF81653 258 355 5.36E-29 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00942 Copper-transporting ATPase 1 signature 4 29 1.0E-6 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00942 Copper-transporting ATPase 1 signature 30 53 1.0E-6 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 PRINTS PR00942 Copper-transporting ATPase 1 signature 59 79 1.0E-6 T 12-10-2018 TDE_0008 2f1e267708473ff0fe3762d930881486 891 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TDE_0008 2f1e267708473ff0fe3762d930881486 891 Pfam PF00122 E1-E2 ATPase 256 434 4.7E-62 T 12-10-2018 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 SUPERFAMILY SSF69055 283 373 3.92E-25 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 6 372 40.558 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 Pfam PF13288 DXP reductoisomerase C-terminal domain 252 367 1.0E-31 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 Gene3D G3DSA:1.10.1740.10 293 377 6.0E-23 T 12-10-2018 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 136 219 9.3E-36 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 Gene3D G3DSA:3.40.50.720 2 140 1.4E-34 T 12-10-2018 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 373 1.2E-108 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 SUPERFAMILY SSF51735 4 140 1.98E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_2342 6a4262ff29683976e39eea76be441f0b 381 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 122 2.7E-27 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 SUPERFAMILY SSF55347 116 254 1.41E-53 T 12-10-2018 TDE_2342 6a4262ff29683976e39eea76be441f0b 381 PIRSF PIRSF006205 3 378 6.8E-127 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TDE_1012 0913ae4874e9bce093394866140d9b62 817 Gene3D G3DSA:1.10.3500.10 125 499 1.1E-130 T 12-10-2018 IPR023323 Tex-like domain superfamily TDE_1012 0913ae4874e9bce093394866140d9b62 817 SUPERFAMILY SSF47781 561 626 2.67E-12 T 12-10-2018 IPR010994 RuvA domain 2-like TDE_1012 0913ae4874e9bce093394866140d9b62 817 Gene3D G3DSA:2.40.50.140 629 717 1.7E-26 T 12-10-2018 TDE_1012 0913ae4874e9bce093394866140d9b62 817 Pfam PF16921 Tex protein YqgF-like domain 332 452 1.6E-42 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain TDE_1012 0913ae4874e9bce093394866140d9b62 817 Pfam PF09371 Tex-like protein N-terminal domain 22 209 1.5E-57 T 12-10-2018 IPR018974 Tex-like protein, N-terminal TDE_1012 0913ae4874e9bce093394866140d9b62 817 Gene3D G3DSA:1.10.10.650 12 122 4.8E-31 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily TDE_1012 0913ae4874e9bce093394866140d9b62 817 SMART SM00316 643 714 9.0E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 TDE_1012 0913ae4874e9bce093394866140d9b62 817 Pfam PF12836 Helix-hairpin-helix motif 492 555 2.1E-27 T 12-10-2018 TDE_1012 0913ae4874e9bce093394866140d9b62 817 SUPERFAMILY SSF158832 16 325 9.68E-92 T 12-10-2018 TDE_1012 0913ae4874e9bce093394866140d9b62 817 SMART SM00732 331 425 1.2E-25 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 TDE_1012 0913ae4874e9bce093394866140d9b62 817 Gene3D G3DSA:3.30.420.140 330 452 1.1E-130 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 TDE_1012 0913ae4874e9bce093394866140d9b62 817 SUPERFAMILY SSF50249 629 715 4.85E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1012 0913ae4874e9bce093394866140d9b62 817 SUPERFAMILY SSF47781 471 559 5.56E-26 T 12-10-2018 IPR010994 RuvA domain 2-like TDE_1012 0913ae4874e9bce093394866140d9b62 817 Gene3D G3DSA:1.10.150.310 500 624 3.0E-42 T 12-10-2018 TDE_1012 0913ae4874e9bce093394866140d9b62 817 Pfam PF00575 S1 RNA binding domain 642 714 1.3E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 TDE_1012 0913ae4874e9bce093394866140d9b62 817 SUPERFAMILY SSF53098 327 469 7.05E-42 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_2356 c89481f8e42e1a6aceddb4abe38d0b03 309 SUPERFAMILY SSF53807 48 306 9.81E-54 T 12-10-2018 TDE_2356 c89481f8e42e1a6aceddb4abe38d0b03 309 Pfam PF01497 Periplasmic binding protein 49 282 1.7E-29 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain TDE_2356 c89481f8e42e1a6aceddb4abe38d0b03 309 Gene3D G3DSA:3.40.50.1980 46 131 2.5E-24 T 12-10-2018 TDE_2356 c89481f8e42e1a6aceddb4abe38d0b03 309 Gene3D G3DSA:3.40.50.1980 132 306 1.8E-45 T 12-10-2018 TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 PIRSF PIRSF000709 145 246 5.6E-4 T 12-10-2018 TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 PIRSF PIRSF000709 2 111 1.1E-7 T 12-10-2018 TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 142 217 3.2E-5 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 125 1.3E-29 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 Gene3D G3DSA:3.40.50.1240 1 247 7.9E-90 T 12-10-2018 IPR029033 Histidine phosphatase superfamily TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 SMART SM00855 2 188 7.3E-25 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 SUPERFAMILY SSF53254 1 244 5.34E-77 T 12-10-2018 IPR029033 Histidine phosphatase superfamily TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 1 245 4.7E-123 T 12-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 TDE_1697 dae6b83c0a0bb353106be03d2a1612f6 247 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 227 43.779 T 12-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 TDE_1286 fcbc63d17b4e7d7287833da4242267ad 226 Pfam PF07719 Tetratricopeptide repeat 182 213 8.9E-6 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 TDE_1286 fcbc63d17b4e7d7287833da4242267ad 226 SMART SM00028 181 214 0.0027 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1286 fcbc63d17b4e7d7287833da4242267ad 226 SMART SM00028 36 69 3.1 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1286 fcbc63d17b4e7d7287833da4242267ad 226 SMART SM00028 147 180 1.7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1286 fcbc63d17b4e7d7287833da4242267ad 226 SMART SM00028 110 143 440.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1286 fcbc63d17b4e7d7287833da4242267ad 226 Gene3D G3DSA:1.25.40.10 27 225 8.7E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1286 fcbc63d17b4e7d7287833da4242267ad 226 SUPERFAMILY SSF48452 38 221 3.8E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1286 fcbc63d17b4e7d7287833da4242267ad 226 Pfam PF13181 Tetratricopeptide repeat 39 68 0.18 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1024 fcf5ace743a2397a042d1e503d20f9bf 459 Pfam PF13941 MutL protein 4 458 1.0E-165 T 12-10-2018 IPR006230 Protein MutL TDE_1024 fcf5ace743a2397a042d1e503d20f9bf 459 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 7 459 1.2E-153 T 12-10-2018 IPR006230 Protein MutL TDE_1024 fcf5ace743a2397a042d1e503d20f9bf 459 PIRSF PIRSF004729 1 459 2.0E-166 T 12-10-2018 IPR006230 Protein MutL TDE_1793 50672990e23fa3a778b6b500b172cdf3 295 SUPERFAMILY SSF56317 3 277 1.31E-46 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_1793 50672990e23fa3a778b6b500b172cdf3 295 Pfam PF00795 Carbon-nitrogen hydrolase 6 197 1.4E-25 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TDE_1793 50672990e23fa3a778b6b500b172cdf3 295 Gene3D G3DSA:3.60.110.10 4 286 8.6E-55 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_1114 d562820794e27e84c92b792a699e7fe4 223 Gene3D G3DSA:1.10.357.10 6 172 2.3E-24 T 12-10-2018 TDE_1114 d562820794e27e84c92b792a699e7fe4 223 SUPERFAMILY SSF46689 10 92 9.23E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_1114 d562820794e27e84c92b792a699e7fe4 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 71 1.2E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 SUPERFAMILY SSF50621 247 388 2.72E-33 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 52 70 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 269 366 9.0E-16 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 72 84 1.3E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 1.3E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 1.3E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 259 278 1.3E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 268 9.8E-53 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 PRINTS PR01182 Ornithine decarboxylase signature 124 146 2.7E-16 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 PRINTS PR01182 Ornithine decarboxylase signature 330 340 2.7E-16 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 PRINTS PR01182 Ornithine decarboxylase signature 94 118 2.7E-16 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 PRINTS PR01182 Ornithine decarboxylase signature 50 77 2.7E-16 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 SUPERFAMILY SSF51419 23 271 2.04E-62 T 12-10-2018 IPR029066 PLP-binding barrel TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 Gene3D G3DSA:3.20.20.10 31 271 1.5E-100 T 12-10-2018 IPR029066 PLP-binding barrel TDE_1109 cd9e4851bca0e2b5156c45cfa8624975 389 Gene3D G3DSA:2.40.37.10 20 381 1.5E-100 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TDE_1075 a11fb31c19b9e848edf2f0207475bec5 325 SMART SM00382 36 235 6.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1075 a11fb31c19b9e848edf2f0207475bec5 325 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1075 a11fb31c19b9e848edf2f0207475bec5 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 321 2.2E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1075 a11fb31c19b9e848edf2f0207475bec5 325 Pfam PF00005 ABC transporter 27 185 8.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1075 a11fb31c19b9e848edf2f0207475bec5 325 SUPERFAMILY SSF52540 7 257 2.35E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1075 a11fb31c19b9e848edf2f0207475bec5 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 302 8.9E-15 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1075 a11fb31c19b9e848edf2f0207475bec5 325 Gene3D G3DSA:3.40.50.300 5 325 9.6E-95 T 12-10-2018 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 SUPERFAMILY SSF52009 404 529 1.44E-35 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 317 372 4.8E-11 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 313 7.8E-42 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 780 798 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 SUPERFAMILY SSF56059 5 388 5.3E-126 T 12-10-2018 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Pfam PF00391 PEP-utilising enzyme, mobile domain 439 520 3.7E-27 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 467 478 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 5 893 0.0 T 12-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Gene3D G3DSA:3.20.20.60 549 895 2.9E-144 T 12-10-2018 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Gene3D G3DSA:3.30.470.20 259 356 8.4E-39 T 12-10-2018 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Gene3D G3DSA:1.10.189.10 360 546 5.1E-67 T 12-10-2018 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Gene3D G3DSA:1.20.80.30 116 213 7.4E-94 T 12-10-2018 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 SUPERFAMILY SSF51621 530 894 4.08E-118 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 PIRSF PIRSF000853 3 901 0.0 T 12-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Gene3D G3DSA:3.30.1490.20 16 258 7.4E-94 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 538 892 3.8E-87 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TDE_1501 dc3bdcbda57ebb2ec5df13c9787cab0d 933 Gene3D G3DSA:3.50.30.10 398 526 5.1E-67 T 12-10-2018 TDE_2568 ee77a26d0812f17ae7cf652ea296b7fd 387 SMART SM00981 76 163 4.5E-18 T 12-10-2018 IPR004114 THUMP domain GO:0003723 TDE_2568 ee77a26d0812f17ae7cf652ea296b7fd 387 SUPERFAMILY SSF52402 175 373 2.14E-39 T 12-10-2018 TDE_2568 ee77a26d0812f17ae7cf652ea296b7fd 387 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 387 118.323 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 TDE_2568 ee77a26d0812f17ae7cf652ea296b7fd 387 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 7 369 2.2E-100 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 TDE_2568 ee77a26d0812f17ae7cf652ea296b7fd 387 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 173 366 2.7E-69 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 TDE_2568 ee77a26d0812f17ae7cf652ea296b7fd 387 Pfam PF02926 THUMP domain 30 159 6.3E-17 T 12-10-2018 IPR004114 THUMP domain GO:0003723 TDE_2568 ee77a26d0812f17ae7cf652ea296b7fd 387 Gene3D G3DSA:3.40.50.620 173 387 3.7E-60 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_2568 ee77a26d0812f17ae7cf652ea296b7fd 387 Gene3D G3DSA:3.30.2130.30 1 172 1.5E-39 T 12-10-2018 TDE_2568 ee77a26d0812f17ae7cf652ea296b7fd 387 SUPERFAMILY SSF143437 5 171 5.58E-33 T 12-10-2018 TDE_1806 57b4af59e583e183a03c86d9856dc892 90 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 25 85 8.2E-17 T 12-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 Hamap MF_00335 Ribonuclease Y [rny]. 5 509 23.933 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 Pfam PF00013 KH domain 202 253 1.2E-7 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 Pfam PF12072 Domain of unknown function (DUF3552) 3 193 4.3E-46 T 12-10-2018 IPR022711 Ribonuclease Y, N-terminal TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 SMART SM00322 197 264 4.1E-9 T 12-10-2018 IPR004087 K Homology domain GO:0003676 TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 SUPERFAMILY SSF54791 201 292 1.52E-16 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 9 509 3.5E-219 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 SUPERFAMILY SSF109604 307 459 2.69E-31 T 12-10-2018 TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 Gene3D G3DSA:3.30.1370.10 194 291 4.1E-9 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 SMART SM00471 321 427 1.6E-14 T 12-10-2018 IPR003607 HD/PDEase domain TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 Gene3D G3DSA:1.10.3210.10 314 483 1.5E-19 T 12-10-2018 TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 TIGRFAM TIGR00277 HDIG: HDIG domain 321 398 1.3E-24 T 12-10-2018 IPR006675 HDIG domain TDE_0237 8fe3801c7add5d594ef284030b551c5c 509 Pfam PF01966 HD domain 325 417 4.2E-21 T 12-10-2018 IPR006674 HD domain TDE_2235 1f9e0805fcf7eb245bf3cfd530c87137 412 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 9.6E-77 T 12-10-2018 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 TDE_2235 1f9e0805fcf7eb245bf3cfd530c87137 412 SUPERFAMILY SSF51604 162 411 1.57E-84 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TDE_2235 1f9e0805fcf7eb245bf3cfd530c87137 412 PIRSF PIRSF017107 1 412 1.3E-200 T 12-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 TDE_2235 1f9e0805fcf7eb245bf3cfd530c87137 412 Gene3D G3DSA:3.30.390.10 1 164 1.5E-73 T 12-10-2018 IPR029017 Enolase-like, N-terminal TDE_2235 1f9e0805fcf7eb245bf3cfd530c87137 412 Gene3D G3DSA:3.20.20.120 165 412 2.0E-104 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TDE_2235 1f9e0805fcf7eb245bf3cfd530c87137 412 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 411 7.2E-190 T 12-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 TDE_2235 1f9e0805fcf7eb245bf3cfd530c87137 412 SUPERFAMILY SSF54826 1 159 4.65E-63 T 12-10-2018 TDE_2235 1f9e0805fcf7eb245bf3cfd530c87137 412 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 162 410 4.4E-123 T 12-10-2018 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 ProSitePatterns PS01155 Endonuclease III family signature. 105 134 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 SMART SM00525 189 209 4.0E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 TIGRFAM TIGR01083 nth: endonuclease III 7 197 2.5E-79 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 SMART SM00478 41 188 4.0E-54 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 Hamap MF_00942 Endonuclease III [nth]. 3 210 35.249 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 SUPERFAMILY SSF48150 6 207 5.97E-66 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 PIRSF PIRSF001435 1 209 1.6E-49 T 12-10-2018 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 Gene3D G3DSA:1.10.340.30 24 135 8.3E-72 T 12-10-2018 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 9.9E-7 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 SMART SM00278 112 131 0.0071 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 Pfam PF00633 Helix-hairpin-helix motif 105 130 7.3E-9 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 171 6.2E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TDE_2534 eaab393fba0f6b148982d2b231a13b4c 210 Gene3D G3DSA:1.10.1670.10 14 206 8.3E-72 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 311 385 8.7E-29 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 SUPERFAMILY SSF103039 43 197 9.42E-23 T 12-10-2018 IPR028976 CheC-like superfamily TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 SUPERFAMILY SSF101801 312 390 5.49E-23 T 12-10-2018 IPR036429 SpoA-like superfamily TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 PRINTS PR00956 Flagellar motor switch protein FliN signature 360 375 3.8E-26 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 PRINTS PR00956 Flagellar motor switch protein FliN signature 314 330 3.8E-26 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 PRINTS PR00956 Flagellar motor switch protein FliN signature 331 347 3.8E-26 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 PRINTS PR00956 Flagellar motor switch protein FliN signature 347 360 3.8E-26 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 Gene3D G3DSA:3.40.1550.10 40 215 9.2E-16 T 12-10-2018 IPR028976 CheC-like superfamily TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 Gene3D G3DSA:2.30.330.10 304 393 4.3E-32 T 12-10-2018 IPR036429 SpoA-like superfamily TDE_2762 6652e50fe56cc49c22cc917653a7b157 393 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 315 384 1.3E-23 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) TDE_1023 1f9e92e47f7cefd8d449c43e2d02666e 139 SUPERFAMILY SSF52242 3 134 3.4E-36 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TDE_1023 1f9e92e47f7cefd8d449c43e2d02666e 139 Gene3D G3DSA:3.40.50.280 1 138 3.9E-42 T 12-10-2018 TDE_1023 1f9e92e47f7cefd8d449c43e2d02666e 139 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 6 134 2.5E-61 T 12-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TDE_1023 1f9e92e47f7cefd8d449c43e2d02666e 139 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 138 38.911 T 12-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TDE_1023 1f9e92e47f7cefd8d449c43e2d02666e 139 Pfam PF02310 B12 binding domain 6 96 5.0E-16 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TDE_1023 1f9e92e47f7cefd8d449c43e2d02666e 139 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 3 136 3.7E-17 T 12-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 Gene3D G3DSA:3.30.70.1560 131 221 1.3E-48 T 12-10-2018 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 SUPERFAMILY SSF55120 61 239 2.16E-34 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 235 2.9E-37 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 SUPERFAMILY SSF55174 1 90 3.87E-12 T 12-10-2018 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 Gene3D G3DSA:3.10.290.10 1 59 1.3E-11 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 SMART SM00363 3 64 4.9E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 Pfam PF00849 RNA pseudouridylate synthase 64 203 1.1E-13 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 Gene3D G3DSA:3.30.70.580 64 239 1.3E-48 T 12-10-2018 TDE_0860 e72cf54cf596021b0352f1b9d62dfcfd 245 Pfam PF01479 S4 domain 4 44 5.5E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0392 8962fdf5744ea823e3aacfb6873bb7df 392 Gene3D G3DSA:3.40.50.11890 32 158 9.0E-39 T 12-10-2018 TDE_0392 8962fdf5744ea823e3aacfb6873bb7df 392 Gene3D G3DSA:1.20.1270.370 23 204 9.0E-39 T 12-10-2018 TDE_0392 8962fdf5744ea823e3aacfb6873bb7df 392 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 39 384 6.0E-77 T 12-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit TDE_0392 8962fdf5744ea823e3aacfb6873bb7df 392 Gene3D G3DSA:3.40.50.11900 241 391 2.7E-35 T 12-10-2018 TDE_0779 8d60d17ce46ed9737f28cd71f83099c7 183 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 5 183 42.993 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0779 8d60d17ce46ed9737f28cd71f83099c7 183 SUPERFAMILY SSF55282 7 183 4.47E-73 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0779 8d60d17ce46ed9737f28cd71f83099c7 183 PIRSF PIRSF002161 2 183 6.6E-64 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0779 8d60d17ce46ed9737f28cd71f83099c7 183 Pfam PF00673 ribosomal L5P family C-terminus 88 181 3.9E-38 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0779 8d60d17ce46ed9737f28cd71f83099c7 183 ProSitePatterns PS00358 Ribosomal protein L5 signature. 61 77 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0779 8d60d17ce46ed9737f28cd71f83099c7 183 Pfam PF00281 Ribosomal protein L5 28 84 8.0E-26 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0779 8d60d17ce46ed9737f28cd71f83099c7 183 Gene3D G3DSA:3.30.1440.10 4 183 2.8E-76 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Gene3D G3DSA:1.10.730.10 7 787 0.0 T 12-10-2018 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 SUPERFAMILY SSF52374 2 676 2.69E-140 T 12-10-2018 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Gene3D G3DSA:3.10.20.590 797 857 1.4E-20 T 12-10-2018 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 129 146 1.8E-54 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 504 522 1.8E-54 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 576 586 1.8E-54 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 1.8E-54 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 543 565 1.8E-54 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 155 171 1.8E-54 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 187 200 1.8E-54 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 857 22.952 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 858 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Gene3D G3DSA:3.10.330.110 586 638 0.0 T 12-10-2018 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Gene3D G3DSA:3.90.740.10 228 428 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 418 1.1E-68 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Gene3D G3DSA:3.40.50.620 34 585 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 SUPERFAMILY SSF47323 672 857 1.16E-34 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Pfam PF09334 tRNA synthetases class I (M) 42 187 1.2E-20 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 SUPERFAMILY SSF50677 227 429 1.05E-54 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 629 655 5.6E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2339 0218f46b860936e26ac134f3dfb21b97 858 Pfam PF08264 Anticodon-binding domain of tRNA 710 817 4.8E-17 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TDE_1271 e49c49ec9d4d62b36bec1b21ff188626 323 SMART SM00382 42 234 2.7E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1271 e49c49ec9d4d62b36bec1b21ff188626 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 9.4E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1271 e49c49ec9d4d62b36bec1b21ff188626 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 320 3.8E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1271 e49c49ec9d4d62b36bec1b21ff188626 323 Pfam PF00005 ABC transporter 33 184 1.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1271 e49c49ec9d4d62b36bec1b21ff188626 323 SUPERFAMILY SSF52540 21 256 9.38E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1271 e49c49ec9d4d62b36bec1b21ff188626 323 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1271 e49c49ec9d4d62b36bec1b21ff188626 323 Gene3D G3DSA:3.40.50.300 4 323 2.1E-97 T 12-10-2018 TDE_1260 0dc5e32a16c34d66a0e2ccc203dcbbfc 522 SUPERFAMILY SSF53448 4 202 3.38E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1260 0dc5e32a16c34d66a0e2ccc203dcbbfc 522 Pfam PF12804 MobA-like NTP transferase domain 4 96 8.2E-13 T 12-10-2018 IPR025877 MobA-like NTP transferase TDE_1260 0dc5e32a16c34d66a0e2ccc203dcbbfc 522 PIRSF PIRSF037383 1 522 8.3E-257 T 12-10-2018 IPR017190 Bifunctional CTP:phosphocholine cytidylyltransferase/choline kinase TDE_1260 0dc5e32a16c34d66a0e2ccc203dcbbfc 522 Gene3D G3DSA:3.90.1200.10 324 519 4.8E-56 T 12-10-2018 TDE_1260 0dc5e32a16c34d66a0e2ccc203dcbbfc 522 SUPERFAMILY SSF56112 227 515 2.81E-45 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily TDE_1260 0dc5e32a16c34d66a0e2ccc203dcbbfc 522 Gene3D G3DSA:3.90.550.10 3 226 2.7E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1260 0dc5e32a16c34d66a0e2ccc203dcbbfc 522 Gene3D G3DSA:3.30.200.20 231 323 4.7E-26 T 12-10-2018 TDE_1260 0dc5e32a16c34d66a0e2ccc203dcbbfc 522 Pfam PF01633 Choline/ethanolamine kinase 271 453 1.4E-23 T 12-10-2018 TDE_2752 2e1b409d17cb59c304786a7b1a57a9d3 90 Gene3D G3DSA:3.40.30.10 1 89 7.4E-12 T 12-10-2018 TDE_2752 2e1b409d17cb59c304786a7b1a57a9d3 90 PIRSF PIRSF037291 2 89 2.2E-42 T 12-10-2018 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related TDE_2752 2e1b409d17cb59c304786a7b1a57a9d3 90 SUPERFAMILY SSF52833 4 89 5.28E-10 T 12-10-2018 IPR036249 Thioredoxin-like superfamily TDE_2752 2e1b409d17cb59c304786a7b1a57a9d3 90 Pfam PF00462 Glutaredoxin 6 72 3.4E-8 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TDE_0368 a8953edc5220a82754ebe4d6e93a7701 562 Pfam PF01420 Type I restriction modification DNA specificity domain 37 145 1.9E-12 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TDE_0368 a8953edc5220a82754ebe4d6e93a7701 562 Pfam PF01420 Type I restriction modification DNA specificity domain 168 323 1.0E-6 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TDE_0368 a8953edc5220a82754ebe4d6e93a7701 562 SUPERFAMILY SSF116734 8 168 1.8E-33 T 12-10-2018 TDE_0368 a8953edc5220a82754ebe4d6e93a7701 562 Gene3D G3DSA:1.10.287.1120 114 335 1.7E-60 T 12-10-2018 TDE_0368 a8953edc5220a82754ebe4d6e93a7701 562 Gene3D G3DSA:3.90.220.20 170 291 1.7E-60 T 12-10-2018 TDE_0368 a8953edc5220a82754ebe4d6e93a7701 562 Gene3D G3DSA:3.90.220.20 9 339 1.7E-60 T 12-10-2018 TDE_0368 a8953edc5220a82754ebe4d6e93a7701 562 SUPERFAMILY SSF116734 162 337 3.27E-25 T 12-10-2018 TDE_2200 198492c9134f8a00bd9fc9fce95f03db 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 205 219 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TDE_2200 198492c9134f8a00bd9fc9fce95f03db 401 SUPERFAMILY SSF53383 25 399 3.89E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_2200 198492c9134f8a00bd9fc9fce95f03db 401 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 10 399 1.8E-180 T 12-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 TDE_2200 198492c9134f8a00bd9fc9fce95f03db 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 396 4.4E-151 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TDE_2200 198492c9134f8a00bd9fc9fce95f03db 401 Gene3D G3DSA:3.40.640.10 11 264 1.5E-94 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_2200 198492c9134f8a00bd9fc9fce95f03db 401 PIRSF PIRSF001434 1 400 5.8E-148 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TDE_2200 198492c9134f8a00bd9fc9fce95f03db 401 Gene3D G3DSA:3.90.1150.10 265 401 2.1E-55 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_0393 93cca7c7e5470170fab99562267b2546 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 60 4.3E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0393 93cca7c7e5470170fab99562267b2546 215 Gene3D G3DSA:1.10.357.10 1 198 1.6E-25 T 12-10-2018 TDE_0393 93cca7c7e5470170fab99562267b2546 215 SUPERFAMILY SSF46689 12 72 1.05E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_1265 c5b5e645df20e0358ce719ccad83ab71 387 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 8 382 30.217 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TDE_1265 c5b5e645df20e0358ce719ccad83ab71 387 Gene3D G3DSA:3.30.413.10 285 382 2.6E-27 T 12-10-2018 TDE_1265 c5b5e645df20e0358ce719ccad83ab71 387 SUPERFAMILY SSF56014 291 365 1.05E-7 T 12-10-2018 TDE_1265 c5b5e645df20e0358ce719ccad83ab71 387 PIRSF PIRSF004640 4 387 1.4E-135 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TDE_1265 c5b5e645df20e0358ce719ccad83ab71 387 Gene3D G3DSA:3.20.20.20 8 284 2.1E-80 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TDE_1265 c5b5e645df20e0358ce719ccad83ab71 387 Pfam PF04551 GcpE protein 17 370 8.1E-116 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TDE_1265 c5b5e645df20e0358ce719ccad83ab71 387 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 376 7.1E-115 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TDE_1643 af4048dc8d6db4f1d5a3fd2c11f640e4 330 Gene3D G3DSA:3.30.10.20 114 187 4.6E-9 T 12-10-2018 TDE_1643 af4048dc8d6db4f1d5a3fd2c11f640e4 330 SMART SM00740 110 184 0.0046 T 12-10-2018 IPR005543 PASTA domain TDE_1643 af4048dc8d6db4f1d5a3fd2c11f640e4 330 SMART SM00740 187 253 0.034 T 12-10-2018 IPR005543 PASTA domain TDE_1643 af4048dc8d6db4f1d5a3fd2c11f640e4 330 SMART SM00740 42 109 1.4E-13 T 12-10-2018 IPR005543 PASTA domain TDE_1643 af4048dc8d6db4f1d5a3fd2c11f640e4 330 Gene3D G3DSA:3.30.10.20 191 251 5.4E-6 T 12-10-2018 TDE_1643 af4048dc8d6db4f1d5a3fd2c11f640e4 330 Gene3D G3DSA:3.30.10.20 46 110 1.4E-12 T 12-10-2018 TDE_1643 af4048dc8d6db4f1d5a3fd2c11f640e4 330 Pfam PF03793 PASTA domain 46 108 3.0E-12 T 12-10-2018 IPR005543 PASTA domain TDE_1643 af4048dc8d6db4f1d5a3fd2c11f640e4 330 Pfam PF03793 PASTA domain 115 184 3.0E-10 T 12-10-2018 IPR005543 PASTA domain TDE_1643 af4048dc8d6db4f1d5a3fd2c11f640e4 330 Pfam PF03793 PASTA domain 191 249 7.8E-6 T 12-10-2018 IPR005543 PASTA domain TDE_1637 98868516f74073ee831cd85cc31880b2 936 SMART SM00482 694 900 1.7E-107 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 Gene3D G3DSA:3.30.70.370 672 932 6.5E-109 T 12-10-2018 TDE_1637 98868516f74073ee831cd85cc31880b2 936 Gene3D G3DSA:1.10.150.20 717 860 6.5E-109 T 12-10-2018 TDE_1637 98868516f74073ee831cd85cc31880b2 936 SMART SM00279 174 209 2.5E-12 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 TDE_1637 98868516f74073ee831cd85cc31880b2 936 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 265 1.1E-27 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 TDE_1637 98868516f74073ee831cd85cc31880b2 936 SUPERFAMILY SSF47807 172 283 2.24E-28 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily TDE_1637 98868516f74073ee831cd85cc31880b2 936 SUPERFAMILY SSF56672 532 936 2.33E-149 T 12-10-2018 TDE_1637 98868516f74073ee831cd85cc31880b2 936 ProSitePatterns PS00447 DNA polymerase family A signature. 762 781 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 PRINTS PR00868 DNA-polymerase family A (pol I) signature 663 685 1.0E-75 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 PRINTS PR00868 DNA-polymerase family A (pol I) signature 686 701 1.0E-75 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 787 1.0E-75 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 PRINTS PR00868 DNA-polymerase family A (pol I) signature 738 751 1.0E-75 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 PRINTS PR00868 DNA-polymerase family A (pol I) signature 883 896 1.0E-75 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 PRINTS PR00868 DNA-polymerase family A (pol I) signature 708 731 1.0E-75 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 PRINTS PR00868 DNA-polymerase family A (pol I) signature 799 810 1.0E-75 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 PRINTS PR00868 DNA-polymerase family A (pol I) signature 821 832 1.0E-75 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 PRINTS PR00868 DNA-polymerase family A (pol I) signature 853 869 1.0E-75 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 Gene3D G3DSA:1.20.1060.10 553 666 1.4E-39 T 12-10-2018 TDE_1637 98868516f74073ee831cd85cc31880b2 936 Gene3D G3DSA:3.40.50.1010 6 273 5.4E-88 T 12-10-2018 TDE_1637 98868516f74073ee831cd85cc31880b2 936 Pfam PF00476 DNA polymerase family A 560 934 6.6E-154 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 SMART SM00474 339 528 1.1E-20 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TDE_1637 98868516f74073ee831cd85cc31880b2 936 SUPERFAMILY SSF88723 2 171 3.08E-46 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_1637 98868516f74073ee831cd85cc31880b2 936 SMART SM00475 1 262 3.0E-113 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 TDE_1637 98868516f74073ee831cd85cc31880b2 936 SUPERFAMILY SSF53098 335 529 1.8E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_1637 98868516f74073ee831cd85cc31880b2 936 Pfam PF01612 3'-5' exonuclease 340 527 6.1E-27 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TDE_1637 98868516f74073ee831cd85cc31880b2 936 TIGRFAM TIGR00593 pola: DNA polymerase I 6 936 0.0 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1637 98868516f74073ee831cd85cc31880b2 936 Gene3D G3DSA:1.10.150.20 175 247 5.4E-88 T 12-10-2018 TDE_1637 98868516f74073ee831cd85cc31880b2 936 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 171 3.3E-47 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 TDE_1637 98868516f74073ee831cd85cc31880b2 936 Gene3D G3DSA:3.30.420.10 336 551 1.4E-56 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_2357 aca45cf24399b2e4536ee349bf21df32 327 Pfam PF01032 FecCD transport family 19 326 1.8E-98 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TDE_2357 aca45cf24399b2e4536ee349bf21df32 327 Gene3D G3DSA:1.10.3470.10 5 327 7.7E-103 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_2357 aca45cf24399b2e4536ee349bf21df32 327 SUPERFAMILY SSF81345 5 326 6.8E-88 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_0666 ebcec85c30c6deb1f26f3987224cd0ce 246 SUPERFAMILY SSF52540 3 229 3.16E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0666 ebcec85c30c6deb1f26f3987224cd0ce 246 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 241 2.0E-101 T 12-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 TDE_0666 ebcec85c30c6deb1f26f3987224cd0ce 246 Pfam PF00005 ABC transporter 19 170 1.1E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0666 ebcec85c30c6deb1f26f3987224cd0ce 246 Gene3D G3DSA:3.40.50.300 1 244 2.2E-51 T 12-10-2018 TDE_0666 ebcec85c30c6deb1f26f3987224cd0ce 246 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0666 ebcec85c30c6deb1f26f3987224cd0ce 246 SMART SM00382 28 227 7.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 PRINTS PR01607 Apyrase family signature 64 82 7.0E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 PRINTS PR01607 Apyrase family signature 431 454 7.0E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 PRINTS PR01607 Apyrase family signature 269 292 7.0E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 PRINTS PR01607 Apyrase family signature 243 260 7.0E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 PRINTS PR01607 Apyrase family signature 300 320 7.0E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 PRINTS PR01607 Apyrase family signature 518 537 7.0E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 Gene3D G3DSA:3.90.780.10 377 588 1.6E-49 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 Pfam PF02872 5'-nucleotidase, C-terminal domain 388 534 6.3E-28 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 Pfam PF00149 Calcineurin-like phosphoesterase 67 286 2.3E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 SUPERFAMILY SSF55816 386 590 5.36E-39 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 SUPERFAMILY SSF56300 62 357 8.78E-72 T 12-10-2018 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 ProSitePatterns PS00786 5'-nucleotidase signature 2. 145 156 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_0870 bdc92df98d7f499f6020fa868b6f6e4c 632 Gene3D G3DSA:3.60.21.10 58 368 8.2E-72 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like TDE_0366 49d6463cf088778b76eae7dacf10a9c7 1039 SMART SM00487 276 478 3.6E-5 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_0366 49d6463cf088778b76eae7dacf10a9c7 1039 Gene3D G3DSA:3.90.1570.50 85 268 8.1E-19 T 12-10-2018 TDE_0366 49d6463cf088778b76eae7dacf10a9c7 1039 Gene3D G3DSA:3.40.50.300 271 473 7.0E-48 T 12-10-2018 TDE_0366 49d6463cf088778b76eae7dacf10a9c7 1039 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 44 719 1.3E-150 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 TDE_0366 49d6463cf088778b76eae7dacf10a9c7 1039 Gene3D G3DSA:3.40.50.300 475 721 1.8E-40 T 12-10-2018 TDE_0366 49d6463cf088778b76eae7dacf10a9c7 1039 SUPERFAMILY SSF52540 239 479 1.77E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0366 49d6463cf088778b76eae7dacf10a9c7 1039 Pfam PF04851 Type III restriction enzyme, res subunit 283 452 7.8E-18 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TDE_0366 49d6463cf088778b76eae7dacf10a9c7 1039 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 34 203 1.2E-25 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TDE_1329 1a7c07bf65d24ee2a7ea7767ea5f3fad 587 SUPERFAMILY SSF52540 300 555 5.03E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1329 1a7c07bf65d24ee2a7ea7767ea5f3fad 587 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 333 457 1.9E-19 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_1329 1a7c07bf65d24ee2a7ea7767ea5f3fad 587 SMART SM00382 328 463 0.0019 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1329 1a7c07bf65d24ee2a7ea7767ea5f3fad 587 Gene3D G3DSA:1.10.8.60 465 540 1.7E-7 T 12-10-2018 TDE_1329 1a7c07bf65d24ee2a7ea7767ea5f3fad 587 Gene3D G3DSA:3.40.50.300 296 462 1.9E-25 T 12-10-2018 TDE_1663 eb5824ad34ea5f427dd60eac3778e794 167 SUPERFAMILY SSF103088 59 164 1.09E-20 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_1663 eb5824ad34ea5f427dd60eac3778e794 167 Pfam PF00691 OmpA family 63 159 1.2E-19 T 12-10-2018 IPR006665 OmpA-like domain TDE_1663 eb5824ad34ea5f427dd60eac3778e794 167 Gene3D G3DSA:3.30.1330.60 27 166 3.8E-20 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_2281 fe7b745795a17e2e0d288bda589d88f6 357 Gene3D G3DSA:2.60.34.10 1 125 4.9E-12 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TDE_2281 fe7b745795a17e2e0d288bda589d88f6 357 SUPERFAMILY SSF54106 307 355 3.53E-6 T 12-10-2018 TDE_2281 fe7b745795a17e2e0d288bda589d88f6 357 Pfam PF01476 LysM domain 309 355 1.9E-7 T 12-10-2018 IPR018392 LysM domain TDE_2281 fe7b745795a17e2e0d288bda589d88f6 357 SMART SM00257 308 355 6.5E-8 T 12-10-2018 IPR018392 LysM domain TDE_2281 fe7b745795a17e2e0d288bda589d88f6 357 Gene3D G3DSA:3.10.350.10 301 357 2.0E-10 T 12-10-2018 IPR036779 LysM domain superfamily TDE_2281 fe7b745795a17e2e0d288bda589d88f6 357 SUPERFAMILY SSF100920 4 121 2.09E-12 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TDE_0777 976ea04c36c8482ef1450d0a311df112 122 SMART SM01374 1 122 4.6E-85 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TDE_0777 976ea04c36c8482ef1450d0a311df112 122 SUPERFAMILY SSF50193 1 122 1.96E-52 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TDE_0777 976ea04c36c8482ef1450d0a311df112 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.3E-57 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 TDE_0777 976ea04c36c8482ef1450d0a311df112 122 Gene3D G3DSA:2.40.150.20 1 122 7.0E-54 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TDE_0777 976ea04c36c8482ef1450d0a311df112 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.072 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TDE_0777 976ea04c36c8482ef1450d0a311df112 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0777 976ea04c36c8482ef1450d0a311df112 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 6.2E-55 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TDE_2558 e2376094492d535f3ea6fac9a7153b1a 552 Gene3D G3DSA:1.20.1560.10 6 323 1.3E-40 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2558 e2376094492d535f3ea6fac9a7153b1a 552 Gene3D G3DSA:3.40.50.300 333 552 5.1E-73 T 12-10-2018 TDE_2558 e2376094492d535f3ea6fac9a7153b1a 552 Pfam PF00664 ABC transporter transmembrane region 22 291 1.4E-14 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2558 e2376094492d535f3ea6fac9a7153b1a 552 SUPERFAMILY SSF90123 2 327 1.31E-45 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2558 e2376094492d535f3ea6fac9a7153b1a 552 SMART SM00382 364 550 4.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2558 e2376094492d535f3ea6fac9a7153b1a 552 SUPERFAMILY SSF52540 339 551 5.87E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2558 e2376094492d535f3ea6fac9a7153b1a 552 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2558 e2376094492d535f3ea6fac9a7153b1a 552 Pfam PF00005 ABC transporter 355 503 1.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2216 45f16175c4c19f9dfd9d6c7f5cb63d51 497 Pfam PF00005 ABC transporter 271 425 4.5E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2216 45f16175c4c19f9dfd9d6c7f5cb63d51 497 SUPERFAMILY SSF52540 4 225 6.88E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2216 45f16175c4c19f9dfd9d6c7f5cb63d51 497 SMART SM00382 30 217 5.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2216 45f16175c4c19f9dfd9d6c7f5cb63d51 497 SMART SM00382 280 474 6.0E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2216 45f16175c4c19f9dfd9d6c7f5cb63d51 497 Gene3D G3DSA:3.40.50.300 258 494 7.5E-42 T 12-10-2018 TDE_2216 45f16175c4c19f9dfd9d6c7f5cb63d51 497 Pfam PF00005 ABC transporter 21 170 7.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2216 45f16175c4c19f9dfd9d6c7f5cb63d51 497 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2216 45f16175c4c19f9dfd9d6c7f5cb63d51 497 SUPERFAMILY SSF52540 250 483 2.88E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2216 45f16175c4c19f9dfd9d6c7f5cb63d51 497 Gene3D G3DSA:3.40.50.300 1 241 3.4E-55 T 12-10-2018 TDE_0709 0991d06c017331b7ea559cb810c6e4d8 317 Pfam PF01625 Peptide methionine sulfoxide reductase 4 152 2.7E-57 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TDE_0709 0991d06c017331b7ea559cb810c6e4d8 317 Gene3D G3DSA:3.30.1060.10 1 164 7.3E-61 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TDE_0709 0991d06c017331b7ea559cb810c6e4d8 317 SUPERFAMILY SSF55068 3 160 3.14E-61 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TDE_0709 0991d06c017331b7ea559cb810c6e4d8 317 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 151 7.6E-51 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TDE_0709 0991d06c017331b7ea559cb810c6e4d8 317 SUPERFAMILY SSF51316 171 310 5.07E-56 T 12-10-2018 IPR011057 Mss4-like superfamily TDE_0709 0991d06c017331b7ea559cb810c6e4d8 317 Pfam PF01641 SelR domain 175 295 1.9E-46 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TDE_0709 0991d06c017331b7ea559cb810c6e4d8 317 Gene3D G3DSA:2.170.150.20 165 313 2.5E-56 T 12-10-2018 TDE_0709 0991d06c017331b7ea559cb810c6e4d8 317 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 157 34.98 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TDE_0709 0991d06c017331b7ea559cb810c6e4d8 317 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 171 304 3.2E-59 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TDE_0630 601ed68e4e8b547b5966e1e98d92e5c7 483 SMART SM00331 262 481 2.0E-40 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_0630 601ed68e4e8b547b5966e1e98d92e5c7 483 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 289 481 2.7E-30 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_0630 601ed68e4e8b547b5966e1e98d92e5c7 483 Gene3D G3DSA:3.60.40.10 236 481 1.8E-48 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_0630 601ed68e4e8b547b5966e1e98d92e5c7 483 SUPERFAMILY SSF81606 278 482 3.14E-8 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_2770 eb8b6b0add904bfa4e77a4180af534a9 457 Gene3D G3DSA:3.30.750.140 308 419 1.4E-10 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily TDE_2770 eb8b6b0add904bfa4e77a4180af534a9 457 Pfam PF02120 Flagellar hook-length control protein FliK 331 404 9.2E-16 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal TDE_0349 be21c0a20442ea57ed549ba86d274aea 825 SUPERFAMILY SSF56059 2 313 2.83E-94 T 12-10-2018 TDE_0349 be21c0a20442ea57ed549ba86d274aea 825 Gene3D G3DSA:3.30.470.20 180 330 9.7E-48 T 12-10-2018 TDE_0349 be21c0a20442ea57ed549ba86d274aea 825 SUPERFAMILY SSF52009 723 822 6.02E-29 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TDE_0349 be21c0a20442ea57ed549ba86d274aea 825 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 321 7.2E-103 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TDE_0349 be21c0a20442ea57ed549ba86d274aea 825 Gene3D G3DSA:3.30.1490.20 1 179 4.5E-63 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TDE_0349 be21c0a20442ea57ed549ba86d274aea 825 Gene3D G3DSA:3.50.30.10 722 825 1.7E-34 T 12-10-2018 TDE_0349 be21c0a20442ea57ed549ba86d274aea 825 Pfam PF00391 PEP-utilising enzyme, mobile domain 749 820 3.2E-24 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TDE_0916 3853c1e9bf91508a2d111b1a2b17eb7d 581 SMART SM00382 369 555 9.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0916 3853c1e9bf91508a2d111b1a2b17eb7d 581 Gene3D G3DSA:3.40.50.300 339 581 1.1E-81 T 12-10-2018 TDE_0916 3853c1e9bf91508a2d111b1a2b17eb7d 581 Gene3D G3DSA:1.20.1560.10 1 328 6.6E-31 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0916 3853c1e9bf91508a2d111b1a2b17eb7d 581 SUPERFAMILY SSF90123 8 325 3.27E-41 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0916 3853c1e9bf91508a2d111b1a2b17eb7d 581 Pfam PF00664 ABC transporter transmembrane region 46 291 8.1E-14 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0916 3853c1e9bf91508a2d111b1a2b17eb7d 581 SUPERFAMILY SSF52540 340 577 5.67E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0916 3853c1e9bf91508a2d111b1a2b17eb7d 581 Pfam PF00005 ABC transporter 360 507 9.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0916 3853c1e9bf91508a2d111b1a2b17eb7d 581 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1206 0bff75569a52d8a7bddf988afbe26b4d 240 Gene3D G3DSA:1.25.40.10 123 237 2.7E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1206 0bff75569a52d8a7bddf988afbe26b4d 240 SUPERFAMILY SSF48452 70 218 8.76E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1206 0bff75569a52d8a7bddf988afbe26b4d 240 Pfam PF07719 Tetratricopeptide repeat 70 101 7.4E-6 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 TDE_1206 0bff75569a52d8a7bddf988afbe26b4d 240 Gene3D G3DSA:1.25.40.10 45 121 9.5E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1206 0bff75569a52d8a7bddf988afbe26b4d 240 Pfam PF14559 Tetratricopeptide repeat 136 186 4.0E-6 T 12-10-2018 TDE_1206 0bff75569a52d8a7bddf988afbe26b4d 240 Pfam PF13174 Tetratricopeptide repeat 191 216 0.0079 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1206 0bff75569a52d8a7bddf988afbe26b4d 240 SMART SM00028 188 221 0.091 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1206 0bff75569a52d8a7bddf988afbe26b4d 240 SMART SM00028 119 152 280.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1206 0bff75569a52d8a7bddf988afbe26b4d 240 SMART SM00028 68 101 0.034 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0532 bc00ad0ee8b431ba0991ca859925c3ef 100 Gene3D G3DSA:1.25.40.10 1 95 5.1E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0532 bc00ad0ee8b431ba0991ca859925c3ef 100 SMART SM00028 3 36 0.028 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0532 bc00ad0ee8b431ba0991ca859925c3ef 100 SMART SM00028 40 73 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0532 bc00ad0ee8b431ba0991ca859925c3ef 100 SUPERFAMILY SSF48452 2 66 1.45E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0532 bc00ad0ee8b431ba0991ca859925c3ef 100 Pfam PF13181 Tetratricopeptide repeat 4 34 1.1E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 94 9.9E-15 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 SUPERFAMILY SSF52374 121 460 6.17E-81 T 12-10-2018 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 Gene3D G3DSA:3.30.1360.70 2 115 8.4E-23 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 Gene3D G3DSA:3.40.50.620 122 466 4.8E-114 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 Pfam PF00750 tRNA synthetases class I (R) 105 452 5.2E-52 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 Gene3D G3DSA:1.10.730.10 467 590 2.2E-33 T 12-10-2018 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 143 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 590 26.367 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 SMART SM00836 468 590 2.7E-41 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 28 590 5.9E-154 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 SUPERFAMILY SSF55190 2 115 9.02E-21 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 SMART SM01016 6 94 8.8E-15 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 SUPERFAMILY SSF47323 462 590 3.07E-30 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 Pfam PF05746 DALR anticodon binding domain 468 590 7.2E-29 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 5.1E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 5.1E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 5.1E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TDE_0971 a95be3c99be953808a7cd8eeb241e112 590 PRINTS PR01038 Arginyl-tRNA synthetase signature 313 334 5.1E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 Gene3D G3DSA:3.30.420.40 10 265 6.4E-71 T 12-10-2018 TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 377 631 4.6E-32 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 10 265 2.3E-25 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 Gene3D G3DSA:3.30.420.40 471 614 5.7E-80 T 12-10-2018 TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 Gene3D G3DSA:3.30.420.40 377 631 5.7E-80 T 12-10-2018 TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 758 978 6.5E-82 T 12-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 SUPERFAMILY SSF53067 8 264 1.46E-52 T 12-10-2018 TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 Gene3D G3DSA:3.30.420.40 105 250 6.4E-71 T 12-10-2018 TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 993 1311 7.1E-47 T 12-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit TDE_1695 63be1d3ff8a8d0ea8aa11ae3cdb25dac 1500 SUPERFAMILY SSF53067 376 631 1.02E-47 T 12-10-2018 TDE_0714 06e144f80c22e7b9e154d56bb0279eab 495 Gene3D G3DSA:3.40.50.720 146 494 9.4E-107 T 12-10-2018 TDE_0714 06e144f80c22e7b9e154d56bb0279eab 495 Pfam PF02629 CoA binding domain 7 81 1.2E-5 T 12-10-2018 IPR003781 CoA-binding GO:0048037 TDE_0714 06e144f80c22e7b9e154d56bb0279eab 495 SUPERFAMILY SSF51735 7 137 2.52E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0714 06e144f80c22e7b9e154d56bb0279eab 495 Gene3D G3DSA:3.40.50.720 6 132 1.5E-26 T 12-10-2018 TDE_0714 06e144f80c22e7b9e154d56bb0279eab 495 SUPERFAMILY SSF51735 148 420 1.15E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0714 06e144f80c22e7b9e154d56bb0279eab 495 Pfam PF02719 Polysaccharide biosynthesis protein 151 442 1.5E-113 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain TDE_0005 41b7b6a22f5bb92e1183f9b8d838055b 351 Pfam PF01212 Beta-eliminating lyase 17 236 3.8E-27 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 TDE_0005 41b7b6a22f5bb92e1183f9b8d838055b 351 Gene3D G3DSA:3.40.640.10 13 254 1.5E-110 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_0005 41b7b6a22f5bb92e1183f9b8d838055b 351 Gene3D G3DSA:3.90.1150.10 6 336 1.5E-110 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_0005 41b7b6a22f5bb92e1183f9b8d838055b 351 SUPERFAMILY SSF53383 1 343 4.49E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_2619 eed8d18c8b71a0a9d7fa2239c36f2d55 404 SUPERFAMILY SSF53335 64 403 3.58E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2619 eed8d18c8b71a0a9d7fa2239c36f2d55 404 Gene3D G3DSA:2.40.50.140 2 75 1.8E-19 T 12-10-2018 TDE_2619 eed8d18c8b71a0a9d7fa2239c36f2d55 404 Gene3D G3DSA:3.40.50.150 187 402 1.2E-44 T 12-10-2018 TDE_2619 eed8d18c8b71a0a9d7fa2239c36f2d55 404 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 334 365 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site TDE_2619 eed8d18c8b71a0a9d7fa2239c36f2d55 404 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 195 399 2.4E-22 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 TDE_2619 eed8d18c8b71a0a9d7fa2239c36f2d55 404 SUPERFAMILY SSF50249 5 62 8.0E-8 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 Gene3D G3DSA:3.30.70.140 377 477 3.0E-8 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 333 1.3E-90 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 SUPERFAMILY SSF54893 378 477 4.05E-14 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 167 1.4E-25 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 154 165 4.1E-6 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 286 295 4.1E-6 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 4.1E-6 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 SUPERFAMILY SSF53671 4 336 7.59E-59 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 377 474 1.7E-18 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 378 473 0.002 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 153 170 1.9E-20 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 249 258 1.9E-20 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 1.9E-20 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 1.9E-20 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 290 295 1.9E-20 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 1.9E-20 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 175 332 4.3E-8 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 Gene3D G3DSA:3.40.50.1370 154 321 1.9E-71 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 Gene3D G3DSA:3.40.50.1370 11 332 1.9E-71 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 480 529 1.1E-9 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal TDE_0129 b72da9f18ca5f74366ed88a222c07cdb 535 SUPERFAMILY SSF57825 485 530 9.42E-9 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily TDE_0624 3b3a0c7408c32c97da1dfce4ad5ab170 252 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 242 7.5E-67 T 12-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 TDE_0624 3b3a0c7408c32c97da1dfce4ad5ab170 252 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 231 1.4E-44 T 12-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 514 5.8E-15 T 12-10-2018 IPR000160 GGDEF domain TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 SUPERFAMILY SSF141868 545 795 1.14E-69 T 12-10-2018 IPR035919 EAL domain superfamily TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 Pfam PF00563 EAL domain 545 783 4.0E-58 T 12-10-2018 IPR001633 EAL domain TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 Pfam PF02743 Cache domain 38 273 9.7E-21 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 Gene3D G3DSA:3.30.70.270 372 531 2.4E-20 T 12-10-2018 TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 Gene3D G3DSA:3.20.20.450 544 799 3.9E-73 T 12-10-2018 IPR035919 EAL domain superfamily TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 519 5.6E-15 T 12-10-2018 IPR000160 GGDEF domain TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 SMART SM00052 539 788 2.4E-64 T 12-10-2018 IPR001633 EAL domain TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 SUPERFAMILY SSF103190 55 155 9.42E-8 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 Gene3D G3DSA:3.30.450.20 62 174 4.9E-31 T 12-10-2018 TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 Gene3D G3DSA:3.30.450.20 50 285 4.9E-31 T 12-10-2018 TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 SUPERFAMILY SSF55073 374 525 2.31E-20 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0128 05c7b2ae8d5412b258db628caffe107d 801 SMART SM00267 366 527 5.6E-6 T 12-10-2018 IPR000160 GGDEF domain TDE_2155 46c5f358bb5a428c821784aca1935143 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2155 46c5f358bb5a428c821784aca1935143 66 Pfam PF01632 Ribosomal protein L35 2 61 2.6E-21 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2155 46c5f358bb5a428c821784aca1935143 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.6E-17 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TDE_2155 46c5f358bb5a428c821784aca1935143 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.6E-17 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TDE_2155 46c5f358bb5a428c821784aca1935143 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.6E-17 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TDE_2155 46c5f358bb5a428c821784aca1935143 66 Gene3D G3DSA:2.40.50.530 1 65 4.8E-22 T 12-10-2018 TDE_2155 46c5f358bb5a428c821784aca1935143 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 65 9.2E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TDE_2155 46c5f358bb5a428c821784aca1935143 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.907 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TDE_2155 46c5f358bb5a428c821784aca1935143 66 SUPERFAMILY SSF143034 2 65 9.16E-20 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1662 fb53f31d66e8e8ba946b9c49a71dc9fa 445 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 11 440 4.3E-145 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 TDE_1662 fb53f31d66e8e8ba946b9c49a71dc9fa 445 Pfam PF03796 DnaB-like helicase C terminal domain 187 439 2.1E-87 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 TDE_1662 fb53f31d66e8e8ba946b9c49a71dc9fa 445 SUPERFAMILY SSF52540 186 433 9.14E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1662 fb53f31d66e8e8ba946b9c49a71dc9fa 445 Pfam PF00772 DnaB-like helicase N terminal domain 12 113 1.9E-32 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 TDE_1662 fb53f31d66e8e8ba946b9c49a71dc9fa 445 SUPERFAMILY SSF48024 10 121 4.18E-34 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 TDE_1662 fb53f31d66e8e8ba946b9c49a71dc9fa 445 Gene3D G3DSA:3.40.50.300 170 444 1.6E-88 T 12-10-2018 TDE_1662 fb53f31d66e8e8ba946b9c49a71dc9fa 445 Gene3D G3DSA:1.10.860.10 4 168 2.0E-50 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal TDE_1662 fb53f31d66e8e8ba946b9c49a71dc9fa 445 SMART SM00382 204 399 7.6E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1402 b714d7446c4bf93dc4682f04e36e1236 425 Pfam PF13173 AAA domain 25 138 4.4E-12 T 12-10-2018 TDE_1402 b714d7446c4bf93dc4682f04e36e1236 425 Pfam PF13635 Domain of unknown function (DUF4143) 204 369 1.2E-21 T 12-10-2018 IPR025420 Domain of unknown function DUF4143 TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 Gene3D G3DSA:3.10.350.10 122 177 3.7E-10 T 12-10-2018 IPR036779 LysM domain superfamily TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 Gene3D G3DSA:2.70.70.10 216 363 4.6E-48 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 SUPERFAMILY SSF54106 179 222 1.57E-9 T 12-10-2018 TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 SUPERFAMILY SSF51261 229 362 8.37E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 Pfam PF01551 Peptidase family M23 264 358 1.2E-30 T 12-10-2018 IPR016047 Peptidase M23 TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 SUPERFAMILY SSF54106 128 173 1.03E-5 T 12-10-2018 TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 Pfam PF01476 LysM domain 180 222 1.1E-11 T 12-10-2018 IPR018392 LysM domain TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 Pfam PF01476 LysM domain 129 173 1.9E-9 T 12-10-2018 IPR018392 LysM domain TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 SMART SM00257 179 222 1.5E-11 T 12-10-2018 IPR018392 LysM domain TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 SMART SM00257 128 173 1.2E-9 T 12-10-2018 IPR018392 LysM domain TDE_2753 8ded1ea690d5a8e5e5a8d2ced80ae35b 363 Gene3D G3DSA:3.10.350.10 180 215 2.0E-8 T 12-10-2018 IPR036779 LysM domain superfamily TDE_1954 4ea49dba0b27a0ea0f4fd468b5083fda 84 SUPERFAMILY SSF143120 2 53 1.96E-14 T 12-10-2018 IPR036165 YefM-like superfamily TDE_1954 4ea49dba0b27a0ea0f4fd468b5083fda 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 54 3.1E-11 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TDE_1954 4ea49dba0b27a0ea0f4fd468b5083fda 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 50 4.0E-7 T 12-10-2018 TDE_1954 4ea49dba0b27a0ea0f4fd468b5083fda 84 Gene3D G3DSA:3.40.1620.40 1 53 6.9E-8 T 12-10-2018 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Gene3D G3DSA:1.10.150.20 408 479 4.1E-11 T 12-10-2018 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 SUPERFAMILY SSF56091 3 299 1.87E-63 T 12-10-2018 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Gene3D G3DSA:1.10.287.610 2 53 2.7E-10 T 12-10-2018 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 SMART SM00532 2 424 1.6E-107 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 10 638 1.6E-160 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Gene3D G3DSA:3.30.1490.70 69 297 8.7E-49 T 12-10-2018 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 SUPERFAMILY SSF50249 300 372 2.23E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 SUPERFAMILY SSF47781 383 540 3.11E-33 T 12-10-2018 IPR010994 RuvA domain 2-like TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Gene3D G3DSA:1.10.150.20 489 540 2.8E-6 T 12-10-2018 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 SUPERFAMILY SSF52113 566 643 7.36E-14 T 12-10-2018 IPR036420 BRCT domain superfamily TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 SMART SM00292 566 645 8.1E-9 T 12-10-2018 IPR001357 BRCT domain TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 99 128 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 304 371 3.3E-17 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Gene3D G3DSA:2.40.50.140 299 371 6.2E-19 T 12-10-2018 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Pfam PF14520 Helix-hairpin-helix domain 423 474 0.004 T 12-10-2018 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 297 4.2E-43 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Gene3D G3DSA:3.30.470.30 61 239 8.7E-49 T 12-10-2018 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 568 642 7.3E-12 T 12-10-2018 IPR001357 BRCT domain TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 PIRSF PIRSF001604 1 645 2.3E-166 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Gene3D G3DSA:3.40.50.10190 556 644 4.9E-23 T 12-10-2018 IPR036420 BRCT domain superfamily TDE_1538 1d9d8e523bf2d4a88f11fd417e8c0fc3 645 Hamap MF_01588 DNA ligase [ligA]. 1 642 47.281 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TDE_2605 4b6999999f92db8651aa6762571b0214 180 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 179 4.3E-43 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TDE_2605 4b6999999f92db8651aa6762571b0214 180 PIRSF PIRSF000709 1 180 6.1E-18 T 12-10-2018 TDE_2605 4b6999999f92db8651aa6762571b0214 180 SMART SM00855 2 153 6.7E-12 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TDE_2605 4b6999999f92db8651aa6762571b0214 180 Gene3D G3DSA:3.40.50.1240 1 180 2.4E-46 T 12-10-2018 IPR029033 Histidine phosphatase superfamily TDE_2605 4b6999999f92db8651aa6762571b0214 180 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 TDE_2605 4b6999999f92db8651aa6762571b0214 180 SUPERFAMILY SSF53254 1 179 2.62E-44 T 12-10-2018 IPR029033 Histidine phosphatase superfamily TDE_1240 b34c91d9735dfe617d93658e30654d77 300 Pfam PF02562 PhoH-like protein 95 298 4.3E-85 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 TDE_1240 b34c91d9735dfe617d93658e30654d77 300 SUPERFAMILY SSF52540 43 272 5.96E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1240 b34c91d9735dfe617d93658e30654d77 300 Gene3D G3DSA:3.40.50.300 92 298 1.3E-71 T 12-10-2018 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 Pfam PF00149 Calcineurin-like phosphoesterase 51 271 6.4E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 Gene3D G3DSA:3.90.780.10 350 531 2.8E-48 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 Gene3D G3DSA:3.60.21.10 45 343 8.6E-71 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 PRINTS PR01607 Apyrase family signature 254 277 1.1E-28 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 PRINTS PR01607 Apyrase family signature 280 300 1.1E-28 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 PRINTS PR01607 Apyrase family signature 228 245 1.1E-28 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 PRINTS PR01607 Apyrase family signature 47 65 1.1E-28 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 PRINTS PR01607 Apyrase family signature 399 422 1.1E-28 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 PRINTS PR01607 Apyrase family signature 470 489 1.1E-28 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 SUPERFAMILY SSF55816 343 529 8.24E-47 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 Pfam PF02872 5'-nucleotidase, C-terminal domain 347 493 3.9E-37 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TDE_2257 00c5e8e8984f9b05161411dd7fb8a9e6 533 SUPERFAMILY SSF56300 45 344 3.2E-69 T 12-10-2018 TDE_2125 24a9f10958c200957c1cc1c0bbfdf6c8 246 SUPERFAMILY SSF55729 46 245 2.54E-66 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2125 24a9f10958c200957c1cc1c0bbfdf6c8 246 Gene3D G3DSA:3.40.630.70 91 246 9.5E-51 T 12-10-2018 TDE_2125 24a9f10958c200957c1cc1c0bbfdf6c8 246 Gene3D G3DSA:2.30.210.20 38 90 1.6E-13 T 12-10-2018 TDE_2125 24a9f10958c200957c1cc1c0bbfdf6c8 246 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 66 236 9.2E-58 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TDE_2125 24a9f10958c200957c1cc1c0bbfdf6c8 246 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 68 243 3.5E-54 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TDE_2125 24a9f10958c200957c1cc1c0bbfdf6c8 246 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 246 71.309 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SUPERFAMILY SSF50249 354 436 1.23E-7 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Hamap MF_00238 Cytidylate kinase [cmk]. 1 223 27.549 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SUPERFAMILY SSF50249 441 526 2.79E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 218 7.4E-57 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SUPERFAMILY SSF52540 1 222 4.17E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SUPERFAMILY SSF50249 257 359 5.28E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 258 774 2.6E-194 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Gene3D G3DSA:2.40.50.140 520 608 1.1E-26 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Gene3D G3DSA:2.40.50.140 609 697 1.4E-23 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SMART SM00316 350 422 2.0 T 12-10-2018 IPR022967 RNA-binding domain, S1 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SMART SM00316 613 685 1.1E-19 T 12-10-2018 IPR022967 RNA-binding domain, S1 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SMART SM00316 271 334 1.4E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SMART SM00316 526 598 3.9E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SMART SM00316 441 511 7.1E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SMART SM00316 700 774 6.2E-20 T 12-10-2018 IPR022967 RNA-binding domain, S1 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Gene3D G3DSA:3.40.50.300 1 228 2.1E-68 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SUPERFAMILY SSF50249 598 688 8.21E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SUPERFAMILY SSF50249 680 790 2.83E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Pfam PF02224 Cytidylate kinase 3 219 1.1E-70 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 SUPERFAMILY SSF50249 513 617 1.37E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Pfam PF00575 S1 RNA binding domain 270 332 1.4E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Pfam PF00575 S1 RNA binding domain 700 774 2.7E-12 T 12-10-2018 IPR003029 S1 domain GO:0003676 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Pfam PF00575 S1 RNA binding domain 614 685 1.1E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Pfam PF00575 S1 RNA binding domain 441 511 7.8E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Pfam PF00575 S1 RNA binding domain 525 598 1.8E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 PRINTS PR00681 Ribosomal protein S1 signature 374 391 3.3E-37 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 PRINTS PR00681 Ribosomal protein S1 signature 273 291 3.3E-37 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 PRINTS PR00681 Ribosomal protein S1 signature 541 560 3.3E-37 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 PRINTS PR00681 Ribosomal protein S1 signature 581 599 3.3E-37 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 PRINTS PR00681 Ribosomal protein S1 signature 291 305 3.3E-37 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 PRINTS PR00681 Ribosomal protein S1 signature 463 484 3.3E-37 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Gene3D G3DSA:2.40.50.140 698 785 2.3E-21 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Gene3D G3DSA:2.40.50.140 438 519 2.8E-25 T 12-10-2018 TDE_2080 c4f800cfb32d5c4edb2e2acbe06c0308 811 Gene3D G3DSA:2.40.50.140 259 343 6.3E-12 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 Gene3D G3DSA:3.30.230.10 222 403 1.9E-70 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 Gene3D G3DSA:3.40.50.670 404 638 4.4E-103 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR00418 DNA topoisomerase II family signature 425 439 1.3E-71 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.3E-71 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.3E-71 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR00418 DNA topoisomerase II family signature 509 526 1.3E-71 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR00418 DNA topoisomerase II family signature 571 587 1.3E-71 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR00418 DNA topoisomerase II family signature 270 283 1.3E-71 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR00418 DNA topoisomerase II family signature 529 541 1.3E-71 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.3E-71 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR00418 DNA topoisomerase II family signature 491 507 1.3E-71 T 12-10-2018 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 637 3.4E-300 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 568 628 1.2E-27 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 638 87.036 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 SUPERFAMILY SSF54211 223 396 1.12E-56 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 146 2.3E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 Pfam PF00204 DNA gyrase B 223 395 1.5E-61 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 ProSitePatterns PS00177 DNA topoisomerase II signature. 427 435 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 SMART SM00387 31 175 1.6E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 365 379 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 475 484 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 608 624 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 6 16 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 181 196 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 317 333 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 196 209 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 222 244 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 379 399 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 PRINTS PR01159 DNA gyrase subunit B signature 592 604 3.9E-68 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 Gene3D G3DSA:3.30.565.10 2 221 2.8E-84 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 SUPERFAMILY SSF56719 399 630 9.42E-89 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 Pfam PF01751 Toprim domain 424 533 5.7E-17 T 12-10-2018 IPR006171 TOPRIM domain TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 SMART SM00433 35 632 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_0002 7fda8e48e5ddeb1ebd233e303eea5aff 638 SUPERFAMILY SSF55874 6 213 1.83E-66 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0273 4b8011fa1d36843231e474c8ac1dd8a5 588 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0273 4b8011fa1d36843231e474c8ac1dd8a5 588 SUPERFAMILY SSF52540 327 573 2.81E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0273 4b8011fa1d36843231e474c8ac1dd8a5 588 Pfam PF00664 ABC transporter transmembrane region 38 288 4.4E-15 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0273 4b8011fa1d36843231e474c8ac1dd8a5 588 SMART SM00382 365 551 1.4E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0273 4b8011fa1d36843231e474c8ac1dd8a5 588 Pfam PF00005 ABC transporter 357 505 7.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0273 4b8011fa1d36843231e474c8ac1dd8a5 588 Gene3D G3DSA:1.20.1560.10 4 322 1.3E-31 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0273 4b8011fa1d36843231e474c8ac1dd8a5 588 SUPERFAMILY SSF90123 6 325 1.23E-44 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0273 4b8011fa1d36843231e474c8ac1dd8a5 588 Gene3D G3DSA:3.40.50.300 333 579 4.1E-88 T 12-10-2018 TDE_0109 bb293f51bc49f1925df7490e04818b94 515 Hamap MF_00282 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 515 35.005 T 12-10-2018 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal GO:0004826 KEGG: 00970+6.1.1.20 TDE_0109 bb293f51bc49f1925df7490e04818b94 515 SUPERFAMILY SSF55681 243 512 6.35E-56 T 12-10-2018 TDE_0109 bb293f51bc49f1925df7490e04818b94 515 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 218 509 5.4E-101 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TDE_0109 bb293f51bc49f1925df7490e04818b94 515 Gene3D G3DSA:1.10.10.10 78 153 1.4E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0109 bb293f51bc49f1925df7490e04818b94 515 Pfam PF01409 tRNA synthetases class II core domain (F) 243 510 2.0E-76 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 TDE_0109 bb293f51bc49f1925df7490e04818b94 515 Gene3D G3DSA:3.30.930.10 214 515 1.5E-84 T 12-10-2018 TDE_0109 bb293f51bc49f1925df7490e04818b94 515 SUPERFAMILY SSF46785 82 132 1.07E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0109 bb293f51bc49f1925df7490e04818b94 515 Pfam PF10771 Winged helix-turn-helix domain (DUF2582) 86 136 1.4E-5 T 12-10-2018 IPR019707 Winged helix-turn-helix domain (DUF2582) TDE_0445 4ce4684e96ea115e14805485aaf87e4d 426 Pfam PF13520 Amino acid permease 7 397 1.2E-56 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TDE_0445 4ce4684e96ea115e14805485aaf87e4d 426 PIRSF PIRSF006060 1 425 1.1E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TDE_0445 4ce4684e96ea115e14805485aaf87e4d 426 Gene3D G3DSA:1.20.1740.10 2 426 1.1E-92 T 12-10-2018 TDE_1425 e580d7cb96c898e439b952df48a12992 335 Gene3D G3DSA:3.40.630.30 18 151 2.5E-13 T 12-10-2018 TDE_1425 e580d7cb96c898e439b952df48a12992 335 Pfam PF13480 Acetyltransferase (GNAT) domain 186 302 1.2E-5 T 12-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 TDE_1425 e580d7cb96c898e439b952df48a12992 335 Gene3D G3DSA:3.40.630.30 152 319 2.5E-13 T 12-10-2018 TDE_1425 e580d7cb96c898e439b952df48a12992 335 SUPERFAMILY SSF55729 161 321 2.12E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_1335 40ab13dc02227bc6397f626d4722579a 490 PIRSF PIRSF016636 1 490 2.3E-145 T 12-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB TDE_1335 40ab13dc02227bc6397f626d4722579a 490 PIRSF PIRSF500217 1 490 5.2E-144 T 12-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 TDE_1335 40ab13dc02227bc6397f626d4722579a 490 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 90 359 2.4E-24 T 12-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 19 238 1.5E-78 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 SUPERFAMILY SSF69065 13 173 6.8E-47 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 ProSitePatterns PS00517 Ribonuclease III family signature. 54 62 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 Pfam PF00035 Double-stranded RNA binding motif 172 238 1.0E-13 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 SMART SM00358 172 239 4.7E-21 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 SUPERFAMILY SSF54768 126 238 1.27E-24 T 12-10-2018 TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 Gene3D G3DSA:1.10.1520.10 16 163 1.1E-43 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 SMART SM00535 31 165 1.4E-48 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 Hamap MF_00104 Ribonuclease 3 [rnc]. 19 235 30.524 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 Pfam PF14622 Ribonuclease-III-like 31 155 8.7E-36 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TDE_1027 a26d458786e50ee2ba2ea85c332eb4ac 246 Gene3D G3DSA:3.30.160.20 169 239 1.0E-22 T 12-10-2018 TDE_1312 6ca5bed6be932c1f509ff35a5c40ec56 515 SUPERFAMILY SSF52540 5 366 6.39E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1312 6ca5bed6be932c1f509ff35a5c40ec56 515 Gene3D G3DSA:3.40.50.300 2 82 7.9E-9 T 12-10-2018 TDE_1312 6ca5bed6be932c1f509ff35a5c40ec56 515 Pfam PF05872 Bacterial protein of unknown function (DUF853) 11 510 1.1E-207 T 12-10-2018 IPR033186 Helicase HerA-like C-terminal TDE_1312 6ca5bed6be932c1f509ff35a5c40ec56 515 Gene3D G3DSA:3.40.50.300 189 368 4.9E-23 T 12-10-2018 TDE_0073 9640b586b4fd608fee4a39776114424b 307 Gene3D G3DSA:3.40.50.620 3 170 5.2E-28 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_0073 9640b586b4fd608fee4a39776114424b 307 SUPERFAMILY SSF52374 16 168 5.63E-18 T 12-10-2018 TDE_0073 9640b586b4fd608fee4a39776114424b 307 SUPERFAMILY SSF82114 158 296 1.13E-33 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 TDE_0073 9640b586b4fd608fee4a39776114424b 307 SMART SM00904 167 293 4.0E-36 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 TDE_0073 9640b586b4fd608fee4a39776114424b 307 PIRSF PIRSF004491 1 300 8.8E-86 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TDE_0073 9640b586b4fd608fee4a39776114424b 307 Pfam PF01687 Riboflavin kinase 168 290 1.0E-25 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 TDE_0073 9640b586b4fd608fee4a39776114424b 307 Pfam PF06574 FAD synthetase 12 150 1.5E-18 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TDE_0073 9640b586b4fd608fee4a39776114424b 307 Gene3D G3DSA:2.40.30.30 172 301 1.1E-30 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 Pfam PF00571 CBS domain 133 191 3.0E-4 T 12-10-2018 IPR000644 CBS domain TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 Pfam PF00571 CBS domain 198 250 1.1E-9 T 12-10-2018 IPR000644 CBS domain TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 SMART SM00924 30 133 3.6E-30 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 SMART SM00116 204 252 2.4E-7 T 12-10-2018 IPR000644 CBS domain TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 SUPERFAMILY SSF158791 5 129 3.53E-27 T 12-10-2018 TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 Gene3D G3DSA:1.25.60.10 2 128 4.3E-24 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 Pfam PF03448 MgtE intracellular N domain 31 131 3.2E-25 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 Gene3D G3DSA:1.10.357.20 270 448 9.2E-61 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 SUPERFAMILY SSF161093 276 447 7.85E-50 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 Gene3D G3DSA:3.10.580.10 130 257 3.2E-44 T 12-10-2018 TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 Pfam PF01769 Divalent cation transporter 319 441 1.8E-31 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 SUPERFAMILY SSF54631 133 272 8.84E-33 T 12-10-2018 TDE_2718 bf5ac5d157a1cc42620ae8edf6aa3c89 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 10 447 1.6E-150 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 TDE_2158 fc91b7c104bba8de9552a601fc80d2fd 502 SMART SM00382 33 223 1.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2158 fc91b7c104bba8de9552a601fc80d2fd 502 SMART SM00382 303 479 3.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2158 fc91b7c104bba8de9552a601fc80d2fd 502 Pfam PF00005 ABC transporter 294 433 1.1E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2158 fc91b7c104bba8de9552a601fc80d2fd 502 Pfam PF00005 ABC transporter 24 174 4.2E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2158 fc91b7c104bba8de9552a601fc80d2fd 502 Gene3D G3DSA:3.40.50.300 1 271 3.2E-60 T 12-10-2018 TDE_2158 fc91b7c104bba8de9552a601fc80d2fd 502 Gene3D G3DSA:3.40.50.300 277 499 4.2E-50 T 12-10-2018 TDE_2158 fc91b7c104bba8de9552a601fc80d2fd 502 SUPERFAMILY SSF52540 4 235 8.87E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2158 fc91b7c104bba8de9552a601fc80d2fd 502 SUPERFAMILY SSF52540 275 489 6.35E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0615 08ae672d49d9e096fad3a7f5959b45f9 347 Gene3D G3DSA:3.30.420.180 218 347 1.1E-30 T 12-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TDE_0615 08ae672d49d9e096fad3a7f5959b45f9 347 Pfam PF11760 Cobalamin synthesis G N-terminal 45 122 2.7E-33 T 12-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 TDE_0615 08ae672d49d9e096fad3a7f5959b45f9 347 Gene3D G3DSA:3.40.50.11220 1 117 2.3E-33 T 12-10-2018 TDE_0615 08ae672d49d9e096fad3a7f5959b45f9 347 SUPERFAMILY SSF159672 2 233 3.92E-52 T 12-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 TDE_0615 08ae672d49d9e096fad3a7f5959b45f9 347 Pfam PF01890 Cobalamin synthesis G C-terminus 228 343 9.8E-29 T 12-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 TDE_0615 08ae672d49d9e096fad3a7f5959b45f9 347 SUPERFAMILY SSF159664 220 344 7.46E-33 T 12-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TDE_2424 07e4c6150270554a3d6290a2de90b92b 226 SUPERFAMILY SSF56808 5 222 3.53E-74 T 12-10-2018 IPR023674 Ribosomal protein L1-like TDE_2424 07e4c6150270554a3d6290a2de90b92b 226 Pfam PF00687 Ribosomal protein L1p/L10e family 31 216 5.5E-49 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein TDE_2424 07e4c6150270554a3d6290a2de90b92b 226 Gene3D G3DSA:3.40.50.790 64 155 1.5E-74 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich TDE_2424 07e4c6150270554a3d6290a2de90b92b 226 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 225 37.14 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TDE_2424 07e4c6150270554a3d6290a2de90b92b 226 Gene3D G3DSA:3.30.190.20 20 220 1.5E-74 T 12-10-2018 TDE_2424 07e4c6150270554a3d6290a2de90b92b 226 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 223 2.7E-94 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TDE_2424 07e4c6150270554a3d6290a2de90b92b 226 ProSitePatterns PS01199 Ribosomal protein L1 signature. 117 135 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_2424 07e4c6150270554a3d6290a2de90b92b 226 PIRSF PIRSF002155 1 223 5.7E-74 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_1641 1fe7c4fb12a433f09d6ef5f708698cd5 239 SUPERFAMILY SSF75445 142 220 1.57E-20 T 12-10-2018 TDE_1641 1fe7c4fb12a433f09d6ef5f708698cd5 239 SUPERFAMILY SSF100950 3 190 9.21E-38 T 12-10-2018 IPR037171 NagB/RpiA transferase-like TDE_1641 1fe7c4fb12a433f09d6ef5f708698cd5 239 Gene3D G3DSA:3.30.70.260 138 218 2.6E-74 T 12-10-2018 TDE_1641 1fe7c4fb12a433f09d6ef5f708698cd5 239 Gene3D G3DSA:3.40.50.1360 7 235 2.6E-74 T 12-10-2018 TDE_1641 1fe7c4fb12a433f09d6ef5f708698cd5 239 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 239 31.659 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 TDE_1641 1fe7c4fb12a433f09d6ef5f708698cd5 239 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 23 235 5.2E-70 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 TDE_1641 1fe7c4fb12a433f09d6ef5f708698cd5 239 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 59 234 3.5E-61 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 TDE_0150 fc6ad8ea0661547614b357e0278e9487 435 Gene3D G3DSA:2.60.120.10 328 435 5.0E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_0150 fc6ad8ea0661547614b357e0278e9487 435 SUPERFAMILY SSF51206 335 432 1.03E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_0150 fc6ad8ea0661547614b357e0278e9487 435 Pfam PF03631 Virulence factor BrkB 42 295 4.8E-36 T 12-10-2018 IPR017039 Virulence factor BrkB TDE_0150 fc6ad8ea0661547614b357e0278e9487 435 SMART SM00100 315 431 1.5E-5 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_0150 fc6ad8ea0661547614b357e0278e9487 435 Pfam PF00027 Cyclic nucleotide-binding domain 336 414 1.1E-14 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_1889 9b684abda141ff1085527349ff2cc267 462 Pfam PF05525 Branched-chain amino acid transport protein 5 434 2.9E-119 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 TDE_1889 9b684abda141ff1085527349ff2cc267 462 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 12 398 4.9E-109 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 TDE_1238 723a2124f6bb0a19b4155aae2038b86c 116 Pfam PF03840 Preprotein translocase SecG subunit 8 74 6.0E-18 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TDE_1238 723a2124f6bb0a19b4155aae2038b86c 116 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 7 75 2.2E-20 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TDE_1238 723a2124f6bb0a19b4155aae2038b86c 116 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 5.7E-8 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TDE_1238 723a2124f6bb0a19b4155aae2038b86c 116 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 5.7E-8 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TDE_0725 a49c7578e72280e4ff16325e190d8211 391 PIRSF PIRSF000390 5 390 9.3E-100 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TDE_0725 a49c7578e72280e4ff16325e190d8211 391 SUPERFAMILY SSF53383 9 385 1.71E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_0725 a49c7578e72280e4ff16325e190d8211 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 18 382 3.1E-108 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TDE_0725 a49c7578e72280e4ff16325e190d8211 391 Gene3D G3DSA:3.90.1150.10 263 387 1.4E-28 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_0725 a49c7578e72280e4ff16325e190d8211 391 Gene3D G3DSA:3.40.640.10 1 261 1.6E-90 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_0772 2b05753a26157582765e64f3243f8034 118 ProSitePatterns PS00464 Ribosomal protein L22 signature. 88 112 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0772 2b05753a26157582765e64f3243f8034 118 Gene3D G3DSA:3.90.470.10 4 118 9.2E-37 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TDE_0772 2b05753a26157582765e64f3243f8034 118 SUPERFAMILY SSF54843 6 115 4.45E-34 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TDE_0772 2b05753a26157582765e64f3243f8034 118 Pfam PF00237 Ribosomal protein L22p/L17e 11 112 3.1E-28 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 TDE_0772 2b05753a26157582765e64f3243f8034 118 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 9 112 3.5E-26 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0772 2b05753a26157582765e64f3243f8034 118 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 5 115 23.195 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0337 6cf1a805d114f2f0d3b5b3eaf87380ea 270 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TDE_0337 6cf1a805d114f2f0d3b5b3eaf87380ea 270 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.398 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TDE_0337 6cf1a805d114f2f0d3b5b3eaf87380ea 270 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 3.6E-125 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TDE_0337 6cf1a805d114f2f0d3b5b3eaf87380ea 270 SUPERFAMILY SSF100950 1 263 1.81E-103 T 12-10-2018 IPR037171 NagB/RpiA transferase-like TDE_0337 6cf1a805d114f2f0d3b5b3eaf87380ea 270 Gene3D G3DSA:3.40.50.1360 1 268 2.5E-114 T 12-10-2018 TDE_0337 6cf1a805d114f2f0d3b5b3eaf87380ea 270 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 220 1.3E-19 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 TDE_0103 ff16b1121341aa8e22100468bb7cabc4 380 Gene3D G3DSA:3.40.640.10 59 234 1.5E-109 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_0103 ff16b1121341aa8e22100468bb7cabc4 380 SUPERFAMILY SSF53383 1 376 3.16E-80 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_0103 ff16b1121341aa8e22100468bb7cabc4 380 PIRSF PIRSF005572 1 380 9.7E-123 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TDE_0103 ff16b1121341aa8e22100468bb7cabc4 380 Gene3D G3DSA:1.10.260.50 13 278 1.5E-109 T 12-10-2018 TDE_0103 ff16b1121341aa8e22100468bb7cabc4 380 Gene3D G3DSA:3.90.1150.10 2 373 1.5E-109 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_0103 ff16b1121341aa8e22100468bb7cabc4 380 Pfam PF00266 Aminotransferase class-V 2 367 7.2E-59 T 12-10-2018 IPR000192 Aminotransferase class V domain TDE_2180 db16ec1243a0741087ed8257082882bb 472 Gene3D G3DSA:3.40.50.300 226 400 2.3E-91 T 12-10-2018 TDE_2180 db16ec1243a0741087ed8257082882bb 472 Pfam PF12631 MnmE helical domain 133 469 2.0E-39 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 TDE_2180 db16ec1243a0741087ed8257082882bb 472 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 472 1.8E-115 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TDE_2180 db16ec1243a0741087ed8257082882bb 472 Gene3D G3DSA:1.20.120.430 132 472 2.3E-91 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 TDE_2180 db16ec1243a0741087ed8257082882bb 472 SUPERFAMILY SSF52540 83 384 5.1E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2180 db16ec1243a0741087ed8257082882bb 472 Pfam PF01926 50S ribosome-binding GTPase 227 344 3.2E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_2180 db16ec1243a0741087ed8257082882bb 472 Gene3D G3DSA:3.30.1360.120 2 130 2.8E-38 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TDE_2180 db16ec1243a0741087ed8257082882bb 472 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 130 2.3E-32 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 TDE_2180 db16ec1243a0741087ed8257082882bb 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 378 1.1E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_2180 db16ec1243a0741087ed8257082882bb 472 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 472 29.759 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 SUPERFAMILY SSF54680 337 440 4.32E-23 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 PIRSF PIRSF000478 1 440 3.5E-171 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 Gene3D G3DSA:3.90.1170.30 336 426 1.0E-136 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 Pfam PF00591 Glycosyl transferase family, a/b domain 82 311 2.7E-41 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 115 130 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 SMART SM00941 350 424 8.3E-21 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 424 2.7E-21 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 SUPERFAMILY SSF52418 74 328 3.66E-85 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 Gene3D G3DSA:3.40.1030.10 82 335 1.0E-136 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 423 2.1E-176 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 Gene3D G3DSA:1.20.970.10 1 73 2.2E-28 T 12-10-2018 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 SUPERFAMILY SSF47648 19 74 1.83E-17 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2191 8097916f843d35fcfc4a80e5ac9d2037 443 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 71 2.2E-18 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_2259 d011f80009431fb9d5ece7c8e2f4d23b 236 Pfam PF14848 DNA-binding domain 1 122 4.9E-43 T 12-10-2018 TDE_2259 d011f80009431fb9d5ece7c8e2f4d23b 236 Pfam PF14734 Domain of unknown function (DUF4469) with IG-like fold 130 225 8.4E-31 T 12-10-2018 IPR027824 Domain of unknown function DUF4469 with IG-like fold TDE_2259 d011f80009431fb9d5ece7c8e2f4d23b 236 Gene3D G3DSA:4.10.520.10 25 114 1.2E-46 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TDE_2259 d011f80009431fb9d5ece7c8e2f4d23b 236 Gene3D G3DSA:2.70.50.70 22 222 1.2E-46 T 12-10-2018 TDE_2650 7689336ed3ac13bc660ab88f554f5edc 121 Gene3D G3DSA:1.10.10.10 10 121 1.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_2650 7689336ed3ac13bc660ab88f554f5edc 121 SUPERFAMILY SSF46785 6 80 6.53E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_2650 7689336ed3ac13bc660ab88f554f5edc 121 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 3.1E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TDE_2650 7689336ed3ac13bc660ab88f554f5edc 121 SMART SM00345 17 76 1.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TDE_1096 efcec397bab47061115e11d87808ff07 289 Gene3D G3DSA:3.40.1010.20 6 283 7.2E-87 T 12-10-2018 TDE_1096 efcec397bab47061115e11d87808ff07 289 Gene3D G3DSA:3.40.1010.20 103 204 7.2E-87 T 12-10-2018 TDE_1096 efcec397bab47061115e11d87808ff07 289 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 289 31.232 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TDE_1096 efcec397bab47061115e11d87808ff07 289 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 288 5.5E-84 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TDE_1096 efcec397bab47061115e11d87808ff07 289 Pfam PF02401 LytB protein 3 286 1.3E-83 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TDE_1096 efcec397bab47061115e11d87808ff07 289 Gene3D G3DSA:3.40.50.11270 12 102 7.2E-87 T 12-10-2018 TDE_0360 f32ecb9fb1618593937495295a41a6a9 580 Gene3D G3DSA:3.40.50.300 328 580 4.7E-74 T 12-10-2018 TDE_0360 f32ecb9fb1618593937495295a41a6a9 580 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0360 f32ecb9fb1618593937495295a41a6a9 580 SMART SM00382 365 551 6.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0360 f32ecb9fb1618593937495295a41a6a9 580 Pfam PF00005 ABC transporter 357 505 3.7E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0360 f32ecb9fb1618593937495295a41a6a9 580 Pfam PF00664 ABC transporter transmembrane region 18 292 7.4E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0360 f32ecb9fb1618593937495295a41a6a9 580 SUPERFAMILY SSF52540 327 575 2.13E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0360 f32ecb9fb1618593937495295a41a6a9 580 SUPERFAMILY SSF90123 4 319 2.75E-66 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0360 f32ecb9fb1618593937495295a41a6a9 580 Gene3D G3DSA:1.20.1560.10 1 321 4.7E-78 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1301 fe11d558f6294d2275e10d4a29e49d87 561 PIRSF PIRSF003128 1 560 7.2E-169 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TDE_1301 fe11d558f6294d2275e10d4a29e49d87 561 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 556 8.7E-185 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TDE_1301 fe11d558f6294d2275e10d4a29e49d87 561 Gene3D G3DSA:3.40.50.300 299 558 2.9E-50 T 12-10-2018 TDE_1301 fe11d558f6294d2275e10d4a29e49d87 561 SUPERFAMILY SSF52540 1 219 4.16E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1301 fe11d558f6294d2275e10d4a29e49d87 561 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 513 1.1E-18 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TDE_1301 fe11d558f6294d2275e10d4a29e49d87 561 Gene3D G3DSA:3.40.50.300 1 292 1.9E-45 T 12-10-2018 TDE_1301 fe11d558f6294d2275e10d4a29e49d87 561 SUPERFAMILY SSF52540 248 513 2.66E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2533 ddfab3a1fd60402c68a9c66e03a2d4ce 398 SUPERFAMILY SSF103473 1 381 2.35E-46 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_2533 ddfab3a1fd60402c68a9c66e03a2d4ce 398 Gene3D G3DSA:1.20.1250.20 191 378 3.7E-22 T 12-10-2018 TDE_2533 ddfab3a1fd60402c68a9c66e03a2d4ce 398 Pfam PF07690 Major Facilitator Superfamily 14 331 1.1E-25 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TDE_2533 ddfab3a1fd60402c68a9c66e03a2d4ce 398 Gene3D G3DSA:1.20.1250.20 8 187 1.1E-18 T 12-10-2018 TDE_0505 1bcf297192867674c195aefb71dd7c98 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 91 2.0E-32 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TDE_0505 1bcf297192867674c195aefb71dd7c98 93 PIRSF PIRSF006156 2 93 9.9E-34 T 12-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin TDE_0505 1bcf297192867674c195aefb71dd7c98 93 Gene3D G3DSA:3.30.2310.20 2 93 5.5E-36 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0505 1bcf297192867674c195aefb71dd7c98 93 SUPERFAMILY SSF143011 1 91 1.16E-26 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0505 1bcf297192867674c195aefb71dd7c98 93 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 92 6.6E-37 T 12-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin TDE_0505 1bcf297192867674c195aefb71dd7c98 93 TIGRFAM TIGR00053 TIGR00053: addiction module toxin component, YafQ family 3 92 3.9E-26 T 12-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin TDE_0957 ef87b4b93e92c70d795629aa755262b2 247 SUPERFAMILY SSF51695 3 245 3.77E-72 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TDE_0957 ef87b4b93e92c70d795629aa755262b2 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 9 242 5.1E-42 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TDE_0957 ef87b4b93e92c70d795629aa755262b2 247 Gene3D G3DSA:3.20.20.190 1 247 2.5E-77 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TDE_1132 e90e55ab5aa010737f7d8b111289b14f 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 276 3.2E-82 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TDE_1132 e90e55ab5aa010737f7d8b111289b14f 361 SUPERFAMILY SSF103263 4 356 4.32E-106 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TDE_1132 e90e55ab5aa010737f7d8b111289b14f 361 Gene3D G3DSA:3.60.150.10 3 361 1.8E-121 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TDE_1132 e90e55ab5aa010737f7d8b111289b14f 361 Pfam PF01264 Chorismate synthase 10 354 2.4E-118 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TDE_1132 e90e55ab5aa010737f7d8b111289b14f 361 PIRSF PIRSF001456 3 361 1.3E-127 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TDE_1132 e90e55ab5aa010737f7d8b111289b14f 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 361 32.024 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TDE_0960 40c53725924701f53f518fad4a23b9aa 379 SUPERFAMILY SSF51269 309 375 1.33E-10 T 12-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 TDE_0960 40c53725924701f53f518fad4a23b9aa 379 Gene3D G3DSA:3.90.1210.10 315 379 1.5E-11 T 12-10-2018 TDE_0960 40c53725924701f53f518fad4a23b9aa 379 Gene3D G3DSA:3.20.20.70 7 285 2.1E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0960 40c53725924701f53f518fad4a23b9aa 379 Pfam PF08666 SAF domain 318 370 2.6E-5 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TDE_0960 40c53725924701f53f518fad4a23b9aa 379 SUPERFAMILY SSF51569 18 272 4.29E-63 T 12-10-2018 TDE_0960 40c53725924701f53f518fad4a23b9aa 379 Pfam PF03102 NeuB family 40 271 1.8E-57 T 12-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 TDE_0629 58668369d371b40b855e4282e78fc134 393 Gene3D G3DSA:2.60.260.20 281 386 4.4E-30 T 12-10-2018 TDE_0629 58668369d371b40b855e4282e78fc134 393 Pfam PF00226 DnaJ domain 21 83 2.3E-27 T 12-10-2018 IPR001623 DnaJ domain TDE_0629 58668369d371b40b855e4282e78fc134 393 SUPERFAMILY SSF57938 161 238 5.36E-20 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily TDE_0629 58668369d371b40b855e4282e78fc134 393 Pfam PF01556 DnaJ C terminal domain 148 360 2.0E-39 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal TDE_0629 58668369d371b40b855e4282e78fc134 393 Pfam PF00684 DnaJ central domain 174 234 1.8E-12 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 TDE_0629 58668369d371b40b855e4282e78fc134 393 SUPERFAMILY SSF49493 285 371 7.33E-22 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TDE_0629 58668369d371b40b855e4282e78fc134 393 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 21 376 1.1E-128 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TDE_0629 58668369d371b40b855e4282e78fc134 393 Gene3D G3DSA:1.10.287.110 17 137 3.8E-37 T 12-10-2018 IPR036869 Chaperone J-domain superfamily TDE_0629 58668369d371b40b855e4282e78fc134 393 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 18 392 39.115 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TDE_0629 58668369d371b40b855e4282e78fc134 393 SUPERFAMILY SSF49493 141 294 3.4E-17 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TDE_0629 58668369d371b40b855e4282e78fc134 393 Gene3D G3DSA:2.60.260.20 144 276 6.9E-35 T 12-10-2018 TDE_0629 58668369d371b40b855e4282e78fc134 393 Gene3D G3DSA:2.10.230.10 174 234 6.9E-35 T 12-10-2018 TDE_0629 58668369d371b40b855e4282e78fc134 393 SMART SM00271 20 78 5.1E-30 T 12-10-2018 IPR001623 DnaJ domain TDE_0629 58668369d371b40b855e4282e78fc134 393 SUPERFAMILY SSF46565 16 127 6.93E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily TDE_0629 58668369d371b40b855e4282e78fc134 393 PRINTS PR00625 DnaJ domain signature 78 97 4.4E-32 T 12-10-2018 IPR001623 DnaJ domain TDE_0629 58668369d371b40b855e4282e78fc134 393 PRINTS PR00625 DnaJ domain signature 41 56 4.4E-32 T 12-10-2018 IPR001623 DnaJ domain TDE_0629 58668369d371b40b855e4282e78fc134 393 PRINTS PR00625 DnaJ domain signature 23 41 4.4E-32 T 12-10-2018 IPR001623 DnaJ domain TDE_0629 58668369d371b40b855e4282e78fc134 393 PRINTS PR00625 DnaJ domain signature 58 78 4.4E-32 T 12-10-2018 IPR001623 DnaJ domain TDE_0629 58668369d371b40b855e4282e78fc134 393 ProSitePatterns PS00636 Nt-dnaJ domain signature. 63 82 - T 12-10-2018 IPR018253 DnaJ domain, conserved site TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 495 1.4E-230 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 SUPERFAMILY SSF53067 3 254 3.15E-98 T 12-10-2018 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 Gene3D G3DSA:3.30.420.40 1 252 2.0E-111 T 12-10-2018 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 SUPERFAMILY SSF53067 254 495 8.2E-86 T 12-10-2018 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 PIRSF PIRSF000538 2 496 5.0E-182 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 1.7E-85 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 5.1E-60 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 59.322 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 TDE_1916 3f2768f2e0ed0082a98daaa5b0262ae6 496 Gene3D G3DSA:3.30.420.40 253 496 1.7E-90 T 12-10-2018 TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 Gene3D G3DSA:3.30.70.1400 50 135 2.1E-87 T 12-10-2018 TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 Gene3D G3DSA:3.30.1360.120 3 233 2.1E-87 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 4.7E-91 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 Gene3D G3DSA:4.10.1250.10 235 275 8.0E-12 T 12-10-2018 TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 348 1.5E-13 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 353 4.0E-105 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 Gene3D G3DSA:2.40.30.110 277 348 2.4E-18 T 12-10-2018 TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 SUPERFAMILY SSF103025 1 272 1.12E-95 T 12-10-2018 TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 SUPERFAMILY SSF101790 272 353 1.28E-19 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal TDE_1627 4d4a473b8b77da4ce554849a0acfce3b 357 PIRSF PIRSF006487 1 356 1.4E-98 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TDE_0146 6f979bcbad805a620baaa8023aeb582d 400 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 378 8.3E-101 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 TDE_0146 6f979bcbad805a620baaa8023aeb582d 400 Pfam PF01546 Peptidase family M20/M25/M40 73 390 8.5E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 TDE_0146 6f979bcbad805a620baaa8023aeb582d 400 Gene3D G3DSA:3.40.630.10 15 377 3.5E-132 T 12-10-2018 TDE_0146 6f979bcbad805a620baaa8023aeb582d 400 PIRSF PIRSF005962 1 397 5.3E-125 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 TDE_0146 6f979bcbad805a620baaa8023aeb582d 400 SUPERFAMILY SSF55031 189 293 7.33E-29 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TDE_0146 6f979bcbad805a620baaa8023aeb582d 400 Gene3D G3DSA:3.30.70.360 186 300 3.5E-132 T 12-10-2018 TDE_0146 6f979bcbad805a620baaa8023aeb582d 400 SUPERFAMILY SSF53187 3 395 6.29E-78 T 12-10-2018 TDE_0146 6f979bcbad805a620baaa8023aeb582d 400 Pfam PF07687 Peptidase dimerisation domain 191 285 6.0E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain TDE_1427 83a38af82dc6df81dd1bfe962feb0dac 465 Gene3D G3DSA:3.40.50.2000 17 373 5.9E-55 T 12-10-2018 TDE_1427 83a38af82dc6df81dd1bfe962feb0dac 465 SUPERFAMILY SSF53756 6 377 6.28E-63 T 12-10-2018 TDE_1427 83a38af82dc6df81dd1bfe962feb0dac 465 Gene3D G3DSA:3.40.50.2000 184 364 5.9E-55 T 12-10-2018 TDE_1427 83a38af82dc6df81dd1bfe962feb0dac 465 Pfam PF13439 Glycosyltransferase Family 4 17 187 1.1E-8 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TDE_1427 83a38af82dc6df81dd1bfe962feb0dac 465 Pfam PF00534 Glycosyl transferases group 1 207 357 1.5E-30 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 TDE_0895 e2042741fd8781b8107269d3a1e3f03f 315 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 266 308 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TDE_0895 e2042741fd8781b8107269d3a1e3f03f 315 Pfam PF12833 Helix-turn-helix domain 235 313 5.2E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TDE_0895 e2042741fd8781b8107269d3a1e3f03f 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 312 7.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TDE_0895 e2042741fd8781b8107269d3a1e3f03f 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 296 7.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TDE_0895 e2042741fd8781b8107269d3a1e3f03f 315 SUPERFAMILY SSF46689 265 314 2.87E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_0895 e2042741fd8781b8107269d3a1e3f03f 315 SMART SM00342 229 312 7.6E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TDE_0895 e2042741fd8781b8107269d3a1e3f03f 315 Gene3D G3DSA:1.10.10.60 208 315 1.8E-25 T 12-10-2018 TDE_2014 da45cd35cb59d8ff983cca281a9c95e8 328 Gene3D G3DSA:1.25.40.20 67 253 1.7E-27 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2014 da45cd35cb59d8ff983cca281a9c95e8 328 SUPERFAMILY SSF48403 56 246 6.75E-23 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2014 da45cd35cb59d8ff983cca281a9c95e8 328 Pfam PF12796 Ankyrin repeats (3 copies) 157 243 7.8E-8 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_2014 da45cd35cb59d8ff983cca281a9c95e8 328 SMART SM00248 180 210 7.1 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2014 da45cd35cb59d8ff983cca281a9c95e8 328 SMART SM00248 99 128 1.3 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2014 da45cd35cb59d8ff983cca281a9c95e8 328 SMART SM00248 226 255 3400.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2014 da45cd35cb59d8ff983cca281a9c95e8 328 SMART SM00248 133 172 0.05 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0344 b776ea09deb24a857a8121c3c757c83d 73 SUPERFAMILY SSF89447 10 50 3.84E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily TDE_0344 b776ea09deb24a857a8121c3c757c83d 73 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 15 42 4.6E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_0344 b776ea09deb24a857a8121c3c757c83d 73 SMART SM00966 14 60 4.9E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_0344 b776ea09deb24a857a8121c3c757c83d 73 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 13 52 4.1E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_0344 b776ea09deb24a857a8121c3c757c83d 73 Gene3D G3DSA:2.10.260.10 11 53 5.2E-10 T 12-10-2018 TDE_0626 e8c5a090b930f1f5dc519a0de954df8c 504 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 81 327 4.4E-73 T 12-10-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Pfam PF12796 Ankyrin repeats (3 copies) 325 412 9.6E-14 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Pfam PF12796 Ankyrin repeats (3 copies) 55 129 6.1E-10 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Pfam PF12796 Ankyrin repeats (3 copies) 758 840 3.6E-8 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Pfam PF12796 Ankyrin repeats (3 copies) 426 506 2.7E-11 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Pfam PF12796 Ankyrin repeats (3 copies) 656 727 3.5E-9 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Pfam PF12796 Ankyrin repeats (3 copies) 246 311 1.0E-8 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SUPERFAMILY SSF48403 58 319 1.19E-34 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SUPERFAMILY SSF48403 245 521 4.39E-52 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Gene3D G3DSA:1.25.40.20 328 425 6.7E-27 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Pfam PF13637 Ankyrin repeats (many copies) 545 597 7.0E-8 T 12-10-2018 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Gene3D G3DSA:1.25.40.20 863 933 4.3E-7 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 PRINTS PR01415 Ankyrin repeat signature 559 573 7.3E-7 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 PRINTS PR01415 Ankyrin repeat signature 480 495 7.3E-7 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Gene3D G3DSA:1.25.40.20 146 327 7.4E-29 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 247 276 0.16 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 684 713 3.2 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 576 605 2.6 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 347 377 1.8E-4 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 717 745 370.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 479 508 0.11 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 543 572 0.0054 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 160 191 370.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 193 227 2300.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 749 777 2400.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 613 642 470.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 651 680 0.029 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 98 127 1.5 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 65 94 0.0017 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 813 842 0.041 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 779 809 2.8 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 876 906 2000.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 381 410 0.0059 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 445 475 0.022 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 313 343 130.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SMART SM00248 280 309 0.056 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 SUPERFAMILY SSF48403 546 931 4.5E-52 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Gene3D G3DSA:1.25.40.20 535 639 9.2E-23 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Gene3D G3DSA:1.25.40.20 426 534 7.2E-22 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Gene3D G3DSA:1.25.40.20 30 145 3.1E-24 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Gene3D G3DSA:1.25.40.20 793 860 7.0E-10 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2693 f020071663f9124ba5b7f9b229901eb1 933 Gene3D G3DSA:1.25.40.20 640 792 4.3E-32 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2194 651c59d83445042143e66f7d7c9fd3d2 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 TDE_2194 651c59d83445042143e66f7d7c9fd3d2 395 Pfam PF00155 Aminotransferase class I and II 42 383 3.8E-65 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TDE_2194 651c59d83445042143e66f7d7c9fd3d2 395 Gene3D G3DSA:3.40.640.10 58 293 7.2E-146 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_2194 651c59d83445042143e66f7d7c9fd3d2 395 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 383 9.9E-133 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 TDE_2194 651c59d83445042143e66f7d7c9fd3d2 395 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 10 395 2.2E-180 T 12-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type TDE_2194 651c59d83445042143e66f7d7c9fd3d2 395 Gene3D G3DSA:3.90.1150.10 38 386 7.2E-146 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_2194 651c59d83445042143e66f7d7c9fd3d2 395 SUPERFAMILY SSF53383 6 393 1.22E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_2768 62014bfbb4f047e259c36dfee6870eac 463 Pfam PF00460 Flagella basal body rod protein 8 35 8.8E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TDE_2768 62014bfbb4f047e259c36dfee6870eac 463 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 443 5.0E-88 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TDE_2768 62014bfbb4f047e259c36dfee6870eac 463 SUPERFAMILY SSF117143 91 423 4.71E-71 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TDE_2768 62014bfbb4f047e259c36dfee6870eac 463 Gene3D G3DSA:2.60.98.20 168 344 1.7E-10 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily TDE_2768 62014bfbb4f047e259c36dfee6870eac 463 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 384 461 1.8E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TDE_2768 62014bfbb4f047e259c36dfee6870eac 463 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TDE_2768 62014bfbb4f047e259c36dfee6870eac 463 Pfam PF07559 Flagellar basal body protein FlaE 199 343 2.3E-17 T 12-10-2018 IPR011491 Flagellar hook protein FlgE TDE_1290 6f43a3d9f8c09802306ba94f7b664a9c 389 SUPERFAMILY SSF159501 36 137 1.28E-7 T 12-10-2018 TDE_1259 1e26f60549aba85fed91b4b540032955 474 Pfam PF01235 Sodium:alanine symporter family 63 465 2.6E-143 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TDE_1259 1e26f60549aba85fed91b4b540032955 474 PRINTS PR00175 Sodium/alanine symporter signature 198 216 1.0E-54 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TDE_1259 1e26f60549aba85fed91b4b540032955 474 PRINTS PR00175 Sodium/alanine symporter signature 321 339 1.0E-54 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TDE_1259 1e26f60549aba85fed91b4b540032955 474 PRINTS PR00175 Sodium/alanine symporter signature 226 245 1.0E-54 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TDE_1259 1e26f60549aba85fed91b4b540032955 474 PRINTS PR00175 Sodium/alanine symporter signature 431 451 1.0E-54 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TDE_1259 1e26f60549aba85fed91b4b540032955 474 PRINTS PR00175 Sodium/alanine symporter signature 372 394 1.0E-54 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TDE_1259 1e26f60549aba85fed91b4b540032955 474 PRINTS PR00175 Sodium/alanine symporter signature 100 122 1.0E-54 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TDE_1259 1e26f60549aba85fed91b4b540032955 474 TIGRFAM TIGR00835 agcS: amino acid carrier protein 25 462 2.0E-140 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TDE_1259 1e26f60549aba85fed91b4b540032955 474 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 100 115 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 259 265 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 SUPERFAMILY SSF53335 14 478 8.29E-116 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 Pfam PF02384 N-6 DNA Methylase 130 400 6.5E-66 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 153 169 4.3E-23 T 12-10-2018 TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 177 191 4.3E-23 T 12-10-2018 TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 256 268 4.3E-23 T 12-10-2018 TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 288 312 4.3E-23 T 12-10-2018 TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 Pfam PF12161 HsdM N-terminal domain 15 120 4.5E-9 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 Gene3D G3DSA:3.40.50.150 130 453 4.0E-91 T 12-10-2018 TDE_2746 1366f2b6f74cdf6b26a661f678debd65 480 Gene3D G3DSA:1.20.1260.30 4 129 1.9E-33 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 SUPERFAMILY SSF56059 136 357 2.42E-56 T 12-10-2018 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 SUPERFAMILY SSF52440 1 135 3.74E-31 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 PIRSF PIRSF039102 1 361 2.0E-132 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 3 352 9.2E-104 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 Gene3D G3DSA:3.40.50.20 1 125 2.3E-33 T 12-10-2018 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 353 39.389 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 Pfam PF07478 D-ala D-ala ligase C-terminus 144 350 1.3E-71 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 Gene3D G3DSA:3.30.1490.20 151 225 4.6E-76 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 Pfam PF01820 D-ala D-ala ligase N-terminus 2 125 1.2E-28 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 Gene3D G3DSA:3.30.470.20 126 355 4.6E-76 T 12-10-2018 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 294 323 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_2385 35ce6cbfbbbdeffad29b3cf4c9f8d90b 368 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 103 114 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.5E-11 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.5E-11 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.5E-11 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.5E-11 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 SUPERFAMILY SSF51735 231 392 1.24E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 SUPERFAMILY SSF116726 377 464 1.83E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 Pfam PF02254 TrkA-N domain 3 122 6.6E-26 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 Pfam PF02254 TrkA-N domain 233 365 3.1E-30 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 Pfam PF02080 TrkA-C domain 156 222 3.5E-7 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 Pfam PF02080 TrkA-C domain 397 464 3.3E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 Gene3D G3DSA:3.40.50.720 1 138 3.8E-37 T 12-10-2018 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 SUPERFAMILY SSF116726 136 224 6.02E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 Gene3D G3DSA:3.40.50.720 231 380 5.0E-27 T 12-10-2018 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 SUPERFAMILY SSF51735 1 149 1.06E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 Gene3D G3DSA:3.30.70.1450 382 465 2.8E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_0087 f9e14ed08524f1dd2e02f2336c67f50e 466 Gene3D G3DSA:3.30.70.1450 140 225 1.4E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_2639 32a1b7f3d11bf6cabcc09fa74c2fd078 629 Pfam PF01432 Peptidase family M3 230 610 7.9E-67 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 TDE_2639 32a1b7f3d11bf6cabcc09fa74c2fd078 629 Gene3D G3DSA:1.10.287.830 208 252 5.1E-13 T 12-10-2018 TDE_2639 32a1b7f3d11bf6cabcc09fa74c2fd078 629 Gene3D G3DSA:1.10.1370.20 254 629 1.4E-127 T 12-10-2018 TDE_2639 32a1b7f3d11bf6cabcc09fa74c2fd078 629 Gene3D G3DSA:1.20.140.70 43 206 2.0E-32 T 12-10-2018 TDE_2639 32a1b7f3d11bf6cabcc09fa74c2fd078 629 Pfam PF08439 Oligopeptidase F 138 210 3.0E-21 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain TDE_2639 32a1b7f3d11bf6cabcc09fa74c2fd078 629 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 26 622 9.1E-235 T 12-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 TDE_2639 32a1b7f3d11bf6cabcc09fa74c2fd078 629 SUPERFAMILY SSF55486 21 608 2.93E-103 T 12-10-2018 TDE_1943 c05598f706da219668767509e4ba8291 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 29.255 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TDE_1943 c05598f706da219668767509e4ba8291 206 SUPERFAMILY SSF55174 5 204 5.63E-52 T 12-10-2018 TDE_1943 c05598f706da219668767509e4ba8291 206 Gene3D G3DSA:1.10.1050.10 5 204 1.2E-65 T 12-10-2018 TDE_1943 c05598f706da219668767509e4ba8291 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 4 94 4.3E-23 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TDE_1943 c05598f706da219668767509e4ba8291 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 204 1.0E-60 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TDE_1943 c05598f706da219668767509e4ba8291 206 Pfam PF01479 S4 domain 95 142 1.1E-14 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_1943 c05598f706da219668767509e4ba8291 206 SMART SM01390 2 94 3.2E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TDE_1943 c05598f706da219668767509e4ba8291 206 Gene3D G3DSA:3.10.290.10 94 189 1.2E-65 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TDE_1943 c05598f706da219668767509e4ba8291 206 SMART SM00363 95 155 6.7E-13 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_1943 c05598f706da219668767509e4ba8291 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 93 117 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_1877 e79ed502e2b58857e122893728f0cb6b 257 Pfam PF04452 RNA methyltransferase 16 245 8.8E-50 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TDE_1877 e79ed502e2b58857e122893728f0cb6b 257 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 12 249 7.9E-38 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TDE_1877 e79ed502e2b58857e122893728f0cb6b 257 Gene3D G3DSA:3.40.1280.10 5 256 2.2E-49 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TDE_1877 e79ed502e2b58857e122893728f0cb6b 257 PIRSF PIRSF015601 1 251 5.7E-62 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TDE_1877 e79ed502e2b58857e122893728f0cb6b 257 SUPERFAMILY SSF75217 78 249 8.37E-34 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 Gene3D G3DSA:3.20.20.70 24 306 2.5E-62 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 Pfam PF01180 Dihydroorotate dehydrogenase 47 292 2.7E-44 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 SUPERFAMILY SSF52343 422 585 4.58E-12 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 Gene3D G3DSA:3.40.50.80 419 545 1.1E-6 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 SUPERFAMILY SSF63380 336 417 6.27E-15 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 SUPERFAMILY SSF51395 45 290 8.55E-54 T 12-10-2018 TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 PRINTS PR00410 Phenol hydroxylase reductase family signature 427 446 4.5E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 PRINTS PR00410 Phenol hydroxylase reductase family signature 359 371 4.5E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 29 290 4.1E-59 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 Gene3D G3DSA:2.40.30.10 326 415 7.4E-11 T 12-10-2018 TDE_0982 804ecd8dbd1140a0442ac5d5a22d42e9 591 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 261 281 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 TDE_0313 f5691162456bc19be17fb6d950fa41ae 230 Gene3D G3DSA:3.30.70.1450 140 229 4.2E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_0313 f5691162456bc19be17fb6d950fa41ae 230 Pfam PF02254 TrkA-N domain 7 121 1.8E-20 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TDE_0313 f5691162456bc19be17fb6d950fa41ae 230 SUPERFAMILY SSF51735 5 137 1.64E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0313 f5691162456bc19be17fb6d950fa41ae 230 Gene3D G3DSA:3.40.50.720 2 139 6.1E-27 T 12-10-2018 TDE_0313 f5691162456bc19be17fb6d950fa41ae 230 SUPERFAMILY SSF116726 132 229 4.58E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 SUPERFAMILY SSF52821 432 542 1.7E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 Pfam PF00581 Rhodanese-like domain 461 540 2.7E-13 T 12-10-2018 IPR001763 Rhodanese-like domain TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 SMART SM00450 454 548 1.3E-18 T 12-10-2018 IPR001763 Rhodanese-like domain TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 SUPERFAMILY SSF55424 323 446 4.47E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 2.4E-11 T 12-10-2018 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.4E-11 T 12-10-2018 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 2.4E-11 T 12-10-2018 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 Gene3D G3DSA:3.50.50.60 116 440 4.1E-164 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 Gene3D G3DSA:3.40.250.10 451 545 4.0E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 3.9E-18 T 12-10-2018 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.9E-18 T 12-10-2018 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 3.9E-18 T 12-10-2018 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 3.9E-18 T 12-10-2018 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 307 5.9E-54 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 SUPERFAMILY SSF51905 154 318 6.48E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 SUPERFAMILY SSF51905 3 200 1.99E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 Gene3D G3DSA:3.50.50.60 4 340 4.1E-164 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0153 5532fdcff5645d15a00f6b2d5e7d872e 565 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 333 429 1.0E-10 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TDE_0394 a57f2a0fa573ce9d6237947e4538ffa6 320 SUPERFAMILY SSF161098 91 302 9.03E-19 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0394 a57f2a0fa573ce9d6237947e4538ffa6 320 Gene3D G3DSA:1.10.3720.10 85 315 2.9E-23 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0394 a57f2a0fa573ce9d6237947e4538ffa6 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 320 1.3E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 SUPERFAMILY SSF52949 8 159 1.12E-21 T 12-10-2018 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 SUPERFAMILY SSF53187 156 472 3.08E-109 T 12-10-2018 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 161 468 6.3E-113 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 322 329 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 PRINTS PR00481 Cytosol aminopeptidase signature 347 362 6.0E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 PRINTS PR00481 Cytosol aminopeptidase signature 296 317 6.0E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 PRINTS PR00481 Cytosol aminopeptidase signature 318 338 6.0E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 PRINTS PR00481 Cytosol aminopeptidase signature 237 254 6.0E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 PRINTS PR00481 Cytosol aminopeptidase signature 259 280 6.0E-48 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 Gene3D G3DSA:3.40.630.10 151 475 3.9E-120 T 12-10-2018 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 17 124 2.0E-17 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 Gene3D G3DSA:3.40.220.10 5 150 2.4E-20 T 12-10-2018 TDE_0300 7c4b39622f34685dc49ed4585403339c 476 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 476 31.408 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 Gene3D G3DSA:1.10.287.950 443 728 7.1E-49 T 12-10-2018 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 SUPERFAMILY SSF58104 364 728 6.37E-47 T 12-10-2018 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 SMART SM00283 439 728 7.6E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 Gene3D G3DSA:3.30.450.20 119 219 6.9E-35 T 12-10-2018 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 453 482 8.3E-7 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 614 643 8.3E-7 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 566 595 8.3E-7 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 Gene3D G3DSA:1.20.1480.50 314 401 3.1E-5 T 12-10-2018 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 Pfam PF02743 Cache domain 62 305 2.5E-34 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 SUPERFAMILY SSF103190 121 229 3.37E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 518 682 7.0E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0347 8f86e3bb26c75cf3940112b10006a359 729 Gene3D G3DSA:3.30.450.20 220 313 6.9E-35 T 12-10-2018 TDE_0751 27a78ab25488b77128b4a4b962e1004c 309 SMART SM00382 30 177 6.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0751 27a78ab25488b77128b4a4b962e1004c 309 Pfam PF07728 AAA domain (dynein-related subfamily) 34 167 1.2E-11 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TDE_0751 27a78ab25488b77128b4a4b962e1004c 309 SUPERFAMILY SSF52540 8 294 4.27E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0751 27a78ab25488b77128b4a4b962e1004c 309 Gene3D G3DSA:1.10.8.80 219 309 7.0E-26 T 12-10-2018 TDE_0751 27a78ab25488b77128b4a4b962e1004c 309 Gene3D G3DSA:3.40.50.300 4 174 9.4E-47 T 12-10-2018 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 Gene3D G3DSA:3.40.50.620 1 329 3.5E-146 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.1E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 217 2.1E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 203 2.1E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.1E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.1E-25 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 SUPERFAMILY SSF52374 3 313 1.64E-111 T 12-10-2018 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 320 3.1E-106 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 SUPERFAMILY SSF48163 314 502 4.05E-34 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 Gene3D G3DSA:1.10.10.350 402 505 1.3E-21 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 502 32.248 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TDE_0204 5601767b9a3be30d43a830186ff9a9a2 506 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 502 2.1E-168 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TDE_2182 6a2030b933fece7bc748450e6e369f48 666 Gene3D G3DSA:2.130.10.10 26 222 1.5E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TDE_2182 6a2030b933fece7bc748450e6e369f48 666 SUPERFAMILY SSF51445 346 494 1.06E-9 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_2182 6a2030b933fece7bc748450e6e369f48 666 SUPERFAMILY SSF110296 92 141 3.14E-6 T 12-10-2018 TDE_2182 6a2030b933fece7bc748450e6e369f48 666 Pfam PF13200 Putative glycosyl hydrolase domain 337 656 1.2E-98 T 12-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 TDE_2092 b77e97e24064991493e5da0b3e4d1113 279 Gene3D G3DSA:3.40.190.10 51 271 9.6E-47 T 12-10-2018 TDE_2092 b77e97e24064991493e5da0b3e4d1113 279 Gene3D G3DSA:3.40.190.10 136 229 9.6E-47 T 12-10-2018 TDE_2092 b77e97e24064991493e5da0b3e4d1113 279 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 73 86 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site TDE_2092 b77e97e24064991493e5da0b3e4d1113 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 271 2.0E-47 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TDE_2092 b77e97e24064991493e5da0b3e4d1113 279 SMART SM00062 49 273 6.5E-39 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TDE_2092 b77e97e24064991493e5da0b3e4d1113 279 SUPERFAMILY SSF53850 14 273 4.97E-46 T 12-10-2018 TDE_2358 ccfafaf1eb40e3f5fb060659265ea2a3 335 Gene3D G3DSA:3.20.20.210 2 333 1.3E-33 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TDE_2358 ccfafaf1eb40e3f5fb060659265ea2a3 335 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 76 332 6.0E-9 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TDE_2358 ccfafaf1eb40e3f5fb060659265ea2a3 335 SUPERFAMILY SSF51726 3 334 1.92E-33 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 Gene3D G3DSA:1.10.8.60 11 239 7.3E-97 T 12-10-2018 TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 SUPERFAMILY SSF48019 244 367 7.48E-16 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.5E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.5E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 235 367 3.6E-7 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 Gene3D G3DSA:3.40.50.300 13 177 7.3E-97 T 12-10-2018 TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 5.7E-135 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 SUPERFAMILY SSF52540 34 223 3.86E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 Pfam PF13177 DNA polymerase III, delta subunit 21 177 4.8E-44 T 12-10-2018 TDE_2586 3cc16a4f0cb677f1386bdf0caddb9f4b 612 SMART SM00382 37 178 1.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 SUPERFAMILY SSF52540 9 227 1.04E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 Pfam PF00009 Elongation factor Tu GTP binding domain 11 202 1.8E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 Gene3D G3DSA:2.40.30.10 302 394 3.7E-38 T 12-10-2018 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 Pfam PF03144 Elongation factor Tu domain 2 226 294 3.0E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 57.7 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 Gene3D G3DSA:2.40.30.10 208 301 1.3E-38 T 12-10-2018 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 SUPERFAMILY SSF50447 206 302 1.93E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 2.7E-30 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 152 2.5E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 3.0E-209 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 Gene3D G3DSA:3.40.50.300 1 204 3.0E-65 T 12-10-2018 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 SUPERFAMILY SSF50465 299 394 7.19E-34 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.7E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0765 3c59d48caa48853b3ea7f8892d82bfe8 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site TDE_1187 4130ce2e07487e2017d0c13758875912 305 Gene3D G3DSA:3.20.20.80 30 296 3.8E-10 T 12-10-2018 TDE_1187 4130ce2e07487e2017d0c13758875912 305 SUPERFAMILY SSF51445 53 292 4.02E-19 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_2449 dad8c4424a2e3239cc640abd10da8241 468 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 16 267 3.5E-39 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TDE_2449 dad8c4424a2e3239cc640abd10da8241 468 Gene3D G3DSA:3.40.830.10 13 272 1.3E-65 T 12-10-2018 TDE_2449 dad8c4424a2e3239cc640abd10da8241 468 SUPERFAMILY SSF143447 296 467 4.71E-47 T 12-10-2018 IPR036071 AMMECR1 domain superfamily TDE_2449 dad8c4424a2e3239cc640abd10da8241 468 SUPERFAMILY SSF53213 14 274 1.24E-38 T 12-10-2018 TDE_2449 dad8c4424a2e3239cc640abd10da8241 468 Pfam PF01871 AMMECR1 307 465 1.4E-37 T 12-10-2018 IPR002733 AMMECR1 domain TDE_2449 dad8c4424a2e3239cc640abd10da8241 468 Gene3D G3DSA:3.30.700.20 294 425 6.8E-34 T 12-10-2018 IPR027485 AMMECR1, N-terminal TDE_2449 dad8c4424a2e3239cc640abd10da8241 468 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 305 468 8.3E-31 T 12-10-2018 IPR023473 AMMECR1 TDE_2449 dad8c4424a2e3239cc640abd10da8241 468 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 43 254 3.8E-7 T 12-10-2018 TDE_2449 dad8c4424a2e3239cc640abd10da8241 468 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 305 464 7.3E-35 T 12-10-2018 IPR027623 AmmeMemoRadiSam system protein A TDE_1291 7e635d5f802688bee74f9b65f4d56ff7 191 Pfam PF01966 HD domain 25 137 6.9E-7 T 12-10-2018 IPR006674 HD domain TDE_1291 7e635d5f802688bee74f9b65f4d56ff7 191 SUPERFAMILY SSF109604 18 139 8.8E-15 T 12-10-2018 TDE_1291 7e635d5f802688bee74f9b65f4d56ff7 191 SMART SM00471 19 150 9.2E-4 T 12-10-2018 IPR003607 HD/PDEase domain TDE_1291 7e635d5f802688bee74f9b65f4d56ff7 191 Gene3D G3DSA:1.10.3210.10 7 180 1.1E-10 T 12-10-2018 TDE_0105 8a33dc876972408fa5285ab74dabaac8 240 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 239 4.8E-54 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TDE_0105 8a33dc876972408fa5285ab74dabaac8 240 Gene3D G3DSA:3.40.50.1580 1 240 3.2E-61 T 12-10-2018 TDE_0105 8a33dc876972408fa5285ab74dabaac8 240 Pfam PF01048 Phosphorylase superfamily 2 237 7.8E-50 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TDE_0105 8a33dc876972408fa5285ab74dabaac8 240 SUPERFAMILY SSF53167 1 240 4.06E-60 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TDE_2399 2a33b066cf0186aa9b1c0baae5d4b150 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 12 88 8.0E-7 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TDE_2399 2a33b066cf0186aa9b1c0baae5d4b150 118 SUPERFAMILY SSF54211 5 115 7.33E-19 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_2399 2a33b066cf0186aa9b1c0baae5d4b150 118 Gene3D G3DSA:3.30.230.10 2 113 2.4E-19 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_2399 2a33b066cf0186aa9b1c0baae5d4b150 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 109 2.7E-15 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TDE_2399 2a33b066cf0186aa9b1c0baae5d4b150 118 Pfam PF00825 Ribonuclease P 7 109 1.1E-16 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TDE_2399 2a33b066cf0186aa9b1c0baae5d4b150 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 113 11.771 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TDE_2747 844656479f9778e665fa94cd633a09cc 934 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 49 130 7.8E-6 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TDE_2747 844656479f9778e665fa94cd633a09cc 934 Gene3D G3DSA:3.40.50.300 375 616 3.4E-45 T 12-10-2018 TDE_2747 844656479f9778e665fa94cd633a09cc 934 SUPERFAMILY SSF52540 193 581 1.8E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2747 844656479f9778e665fa94cd633a09cc 934 Gene3D G3DSA:3.90.1570.30 7 153 1.9E-12 T 12-10-2018 TDE_2747 844656479f9778e665fa94cd633a09cc 934 Gene3D G3DSA:3.40.50.300 160 370 3.7E-41 T 12-10-2018 TDE_2747 844656479f9778e665fa94cd633a09cc 934 Pfam PF04851 Type III restriction enzyme, res subunit 172 359 2.6E-35 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TDE_2747 844656479f9778e665fa94cd633a09cc 934 Pfam PF08463 EcoEI R protein C-terminal 751 928 6.2E-29 T 12-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 TDE_2747 844656479f9778e665fa94cd633a09cc 934 SUPERFAMILY SSF52540 164 393 9.72E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2747 844656479f9778e665fa94cd633a09cc 934 SMART SM00487 169 388 2.4E-15 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_2001 6c7ccc2c1040700d8dbb75b7acb78856 597 SUPERFAMILY SSF55486 53 592 4.69E-85 T 12-10-2018 TDE_2001 6c7ccc2c1040700d8dbb75b7acb78856 597 Gene3D G3DSA:1.10.1370.20 222 597 5.1E-121 T 12-10-2018 TDE_2001 6c7ccc2c1040700d8dbb75b7acb78856 597 Gene3D G3DSA:1.20.140.70 18 174 4.5E-10 T 12-10-2018 TDE_2001 6c7ccc2c1040700d8dbb75b7acb78856 597 Pfam PF01432 Peptidase family M3 197 577 1.2E-27 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 TDE_2001 6c7ccc2c1040700d8dbb75b7acb78856 597 Pfam PF08439 Oligopeptidase F 116 175 1.8E-10 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain TDE_2001 6c7ccc2c1040700d8dbb75b7acb78856 597 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 8 590 1.8E-218 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 TDE_0883 ea2bdc9bc9dd474340778e5dcd953746 179 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 176 18.707 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TDE_0883 ea2bdc9bc9dd474340778e5dcd953746 179 Gene3D G3DSA:2.30.30.240 99 178 8.6E-11 T 12-10-2018 TDE_0883 ea2bdc9bc9dd474340778e5dcd953746 179 Pfam PF01782 RimM N-terminal domain 6 94 1.2E-20 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 TDE_0883 ea2bdc9bc9dd474340778e5dcd953746 179 SUPERFAMILY SSF50447 2 95 5.65E-14 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_0883 ea2bdc9bc9dd474340778e5dcd953746 179 Gene3D G3DSA:2.40.30.60 3 97 2.0E-17 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 TDE_0883 ea2bdc9bc9dd474340778e5dcd953746 179 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 172 6.7E-33 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TDE_0883 ea2bdc9bc9dd474340778e5dcd953746 179 SUPERFAMILY SSF50346 105 171 5.18E-7 T 12-10-2018 IPR011033 PRC-barrel-like superfamily TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 SMART SM00138 7 269 7.3E-107 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 SUPERFAMILY SSF47757 5 72 1.7E-14 T 12-10-2018 TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 264 2.4E-67 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 SUPERFAMILY SSF53335 73 266 1.76E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 PIRSF PIRSF000410 2 269 1.5E-79 T 12-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 Pfam PF03705 CheR methyltransferase, all-alpha domain 8 59 3.0E-11 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 1.4E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 1.4E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 PRINTS PR00996 Glutamate methyltransferase family signature 29 42 1.4E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 PRINTS PR00996 Glutamate methyltransferase family signature 141 157 1.4E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 1.4E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 1.4E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 Gene3D G3DSA:1.10.155.10 3 71 6.9E-14 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily TDE_0647 47fb809ba9fb002fcde38b21f17b7f59 271 Gene3D G3DSA:3.40.50.150 72 270 6.6E-62 T 12-10-2018 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 PIRSF PIRSF006076 1 815 5.5E-169 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Pfam PF01103 Surface antigen 463 810 5.9E-38 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Gene3D G3DSA:3.10.20.310 357 431 2.3E-21 T 12-10-2018 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Gene3D G3DSA:3.10.20.310 104 184 1.1E-16 T 12-10-2018 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Gene3D G3DSA:3.10.20.310 187 274 3.5E-17 T 12-10-2018 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Gene3D G3DSA:2.40.160.50 433 798 8.7E-16 T 12-10-2018 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Gene3D G3DSA:3.10.20.310 275 356 4.1E-13 T 12-10-2018 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 31 809 5.1E-197 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Pfam PF07244 Surface antigen variable number repeat 359 431 5.5E-13 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Pfam PF07244 Surface antigen variable number repeat 187 274 4.5E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Pfam PF07244 Surface antigen variable number repeat 106 183 9.3E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TDE_2601 97f4102eeebb791a9ac35a801ec6c16e 818 Pfam PF07244 Surface antigen variable number repeat 280 354 2.9E-8 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TDE_0275 9e7e39edc74217ccc55a4de80691efd2 221 Pfam PF02517 CAAX protease self-immunity 124 209 1.2E-19 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 615 1.2E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 526 544 1.2E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 568 586 1.2E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 630 644 1.2E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 689 768 1.1E-16 T 12-10-2018 IPR019489 Clp ATPase, C-terminal TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 SUPERFAMILY SSF81923 9 142 2.49E-29 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 SUPERFAMILY SSF52540 191 442 1.2E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 20 53 1.6E-4 T 12-10-2018 IPR004176 Clp, N-terminal TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 234 345 2.7E-11 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 Gene3D G3DSA:1.10.8.60 373 473 4.4E-29 T 12-10-2018 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 6 770 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 SMART SM00382 522 690 3.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 SMART SM00382 229 372 2.1E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 SUPERFAMILY SSF52540 471 769 8.09E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 Gene3D G3DSA:3.40.50.300 177 371 8.7E-65 T 12-10-2018 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 553 571 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 SMART SM01086 689 777 2.3E-20 T 12-10-2018 IPR019489 Clp ATPase, C-terminal TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 Gene3D G3DSA:1.10.1780.10 5 142 8.4E-24 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 Gene3D G3DSA:3.40.50.300 475 687 5.6E-76 T 12-10-2018 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 Pfam PF07724 AAA domain (Cdc48 subfamily) 521 683 5.9E-47 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_2124 14ecc9dad3e7c41fe04c248e3009aa49 785 Gene3D G3DSA:1.10.8.60 689 778 4.8E-19 T 12-10-2018 TDE_0138 ba02e29ee74ba9b77a11f9462c695103 586 Pfam PF01565 FAD binding domain 126 269 3.5E-34 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TDE_0138 ba02e29ee74ba9b77a11f9462c695103 586 SUPERFAMILY SSF55103 286 560 2.62E-34 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TDE_0138 ba02e29ee74ba9b77a11f9462c695103 586 SUPERFAMILY SSF56176 71 306 7.48E-46 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TDE_0138 ba02e29ee74ba9b77a11f9462c695103 586 Gene3D G3DSA:1.10.45.10 523 560 8.0E-7 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 TDE_0138 ba02e29ee74ba9b77a11f9462c695103 586 Gene3D G3DSA:3.40.462.40 106 496 6.0E-133 T 12-10-2018 TDE_0138 ba02e29ee74ba9b77a11f9462c695103 586 Pfam PF02913 FAD linked oxidases, C-terminal domain 309 560 2.4E-35 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TDE_0138 ba02e29ee74ba9b77a11f9462c695103 586 Gene3D G3DSA:3.30.465.40 79 308 6.0E-133 T 12-10-2018 TDE_0389 8f67889d3090e93165d2aa3619bc167a 412 Gene3D G3DSA:3.40.50.11890 57 182 1.6E-33 T 12-10-2018 TDE_0389 8f67889d3090e93165d2aa3619bc167a 412 Gene3D G3DSA:1.20.1270.370 51 247 1.6E-33 T 12-10-2018 TDE_0389 8f67889d3090e93165d2aa3619bc167a 412 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 64 411 1.6E-81 T 12-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit TDE_0389 8f67889d3090e93165d2aa3619bc167a 412 Gene3D G3DSA:3.40.50.11900 264 412 7.4E-48 T 12-10-2018 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 Gene3D G3DSA:3.20.20.70 7 418 2.4E-81 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 Gene3D G3DSA:3.50.50.60 527 680 9.2E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 429 448 6.3E-16 T 12-10-2018 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 557 575 6.3E-16 T 12-10-2018 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 685 707 6.3E-16 T 12-10-2018 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 515 533 6.3E-16 T 12-10-2018 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 277 3.2E-31 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 SUPERFAMILY SSF51395 8 410 2.17E-64 T 12-10-2018 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 Gene3D G3DSA:3.40.50.720 430 719 9.2E-43 T 12-10-2018 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 516 524 3.3E-7 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 553 577 3.3E-7 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 428 450 3.3E-7 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 428 693 1.1E-23 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_2205 77388066bd6718bc91bae7ab193b6ae7 726 SUPERFAMILY SSF51971 426 680 1.06E-31 T 12-10-2018 TDE_1732 34318b3965a3172a3a0f5c242187d609 278 Gene3D G3DSA:1.25.40.10 206 276 1.4E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1732 34318b3965a3172a3a0f5c242187d609 278 SUPERFAMILY SSF46565 3 66 8.11E-14 T 12-10-2018 IPR036869 Chaperone J-domain superfamily TDE_1732 34318b3965a3172a3a0f5c242187d609 278 SMART SM00271 5 69 1.2E-11 T 12-10-2018 IPR001623 DnaJ domain TDE_1732 34318b3965a3172a3a0f5c242187d609 278 Pfam PF00226 DnaJ domain 7 66 2.2E-10 T 12-10-2018 IPR001623 DnaJ domain TDE_1732 34318b3965a3172a3a0f5c242187d609 278 SUPERFAMILY SSF48452 195 267 1.63E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1732 34318b3965a3172a3a0f5c242187d609 278 Gene3D G3DSA:1.10.287.110 1 93 2.8E-13 T 12-10-2018 IPR036869 Chaperone J-domain superfamily TDE_1504 c1e9cf17163d852a8cc9632854ebb783 67 SUPERFAMILY SSF143800 1 65 1.06E-27 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1504 c1e9cf17163d852a8cc9632854ebb783 67 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.3E-24 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1504 c1e9cf17163d852a8cc9632854ebb783 67 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.3E-24 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1504 c1e9cf17163d852a8cc9632854ebb783 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.3E-24 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1504 c1e9cf17163d852a8cc9632854ebb783 67 Pfam PF01197 Ribosomal protein L31 1 64 6.8E-34 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1504 c1e9cf17163d852a8cc9632854ebb783 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1504 c1e9cf17163d852a8cc9632854ebb783 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 31.567 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1504 c1e9cf17163d852a8cc9632854ebb783 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 7.2E-34 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1504 c1e9cf17163d852a8cc9632854ebb783 67 Gene3D G3DSA:2.30.170.50 1 67 6.9E-35 T 12-10-2018 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 Pfam PF00158 Sigma-54 interaction domain 143 310 2.3E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 4.4E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 4.4E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 Gene3D G3DSA:1.10.10.60 404 446 6.8E-14 T 12-10-2018 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 SMART SM00382 163 310 5.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 SUPERFAMILY SSF52540 142 387 1.32E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 SMART SM00448 3 114 2.1E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 SUPERFAMILY SSF46689 397 446 1.79E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 Gene3D G3DSA:1.10.8.60 314 393 3.4E-26 T 12-10-2018 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 Gene3D G3DSA:3.40.50.2300 1 134 4.3E-40 T 12-10-2018 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 Gene3D G3DSA:3.40.50.300 135 313 2.7E-68 T 12-10-2018 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 Pfam PF02954 Bacterial regulatory protein, Fis family 406 445 5.7E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 Pfam PF00072 Response regulator receiver domain 5 112 6.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_1969 de8fba16c97ee7a58c33477d1da933bc 473 SUPERFAMILY SSF52172 3 188 8.11E-49 T 12-10-2018 IPR011006 CheY-like superfamily TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 SMART SM00861 317 481 1.4E-58 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 SUPERFAMILY SSF52518 314 499 2.95E-52 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 SUPERFAMILY SSF52922 501 633 7.46E-18 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 Gene3D G3DSA:3.40.50.920 492 646 3.1E-18 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 Pfam PF02780 Transketolase, C-terminal domain 500 579 1.5E-12 T 12-10-2018 IPR033248 Transketolase, C-terminal domain TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 Pfam PF02779 Transketolase, pyrimidine binding domain 316 479 2.6E-35 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 631 2.8E-198 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 6 637 40.883 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 7 282 3.9E-111 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 ProSitePatterns PS00801 Transketolase signature 1. 32 51 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 Gene3D G3DSA:3.40.50.970 314 487 1.1E-62 T 12-10-2018 TDE_1910 7ae354abf3b61578482fef878efbf4b5 653 SUPERFAMILY SSF52518 4 379 3.73E-70 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_2692 21eee776a048ead9705eee50676c376e 536 SUPERFAMILY SSF52540 3 272 8.18E-117 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2692 21eee776a048ead9705eee50676c376e 536 Gene3D G3DSA:3.40.50.880 286 536 7.4E-102 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_2692 21eee776a048ead9705eee50676c376e 536 Gene3D G3DSA:3.40.50.300 1 285 7.9E-127 T 12-10-2018 TDE_2692 21eee776a048ead9705eee50676c376e 536 SUPERFAMILY SSF52317 290 532 1.18E-78 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_2692 21eee776a048ead9705eee50676c376e 536 Pfam PF06418 CTP synthase N-terminus 4 268 5.5E-118 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TDE_2692 21eee776a048ead9705eee50676c376e 536 TIGRFAM TIGR00337 PyrG: CTP synthase 2 528 1.8E-232 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TDE_2692 21eee776a048ead9705eee50676c376e 536 Hamap MF_01227 CTP synthase [pyrG]. 3 533 49.044 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TDE_2692 21eee776a048ead9705eee50676c376e 536 Pfam PF00117 Glutamine amidotransferase class-I 303 528 4.8E-52 T 12-10-2018 IPR017926 Glutamine amidotransferase TDE_1639 e161e9b8b0286266b32608bc86cbb79b 276 SUPERFAMILY SSF110997 196 269 2.88E-13 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TDE_1639 e161e9b8b0286266b32608bc86cbb79b 276 Gene3D G3DSA:3.30.70.1070 196 271 1.4E-9 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TDE_1639 e161e9b8b0286266b32608bc86cbb79b 276 Pfam PF05036 Sporulation related domain 196 269 8.4E-14 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 TDE_0027 7e350ad8f8ee59790d332637dc3d9e3c 327 Gene3D G3DSA:3.90.1640.10 17 198 7.1E-26 T 12-10-2018 TDE_0027 7e350ad8f8ee59790d332637dc3d9e3c 327 Pfam PF02272 DHHA1 domain 188 301 3.8E-13 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TDE_0027 7e350ad8f8ee59790d332637dc3d9e3c 327 Pfam PF01368 DHH family 18 159 1.0E-7 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TDE_0027 7e350ad8f8ee59790d332637dc3d9e3c 327 SUPERFAMILY SSF64182 17 299 1.22E-47 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 SUPERFAMILY SSF53187 2 430 9.07E-96 T 12-10-2018 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 74 90 8.9E-44 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 262 280 8.9E-44 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 307 323 8.9E-44 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 396 411 8.9E-44 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 145 162 8.9E-44 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 108 128 8.9E-44 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 10 429 1.7E-126 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 SUPERFAMILY SSF101821 86 213 3.39E-35 T 12-10-2018 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 Gene3D G3DSA:2.30.250.10 84 217 7.0E-156 T 12-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 TDE_0829 35ce6643a01cdcf2dda79c55a499bcef 430 Gene3D G3DSA:3.40.630.10 6 428 7.0E-156 T 12-10-2018 TDE_2219 babd9f8bfa4f715c60866ed7d095c725 561 Gene3D G3DSA:2.10.109.10 427 558 5.5E-6 T 12-10-2018 TDE_2219 babd9f8bfa4f715c60866ed7d095c725 561 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 142 280 2.4E-13 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_2219 babd9f8bfa4f715c60866ed7d095c725 561 SUPERFAMILY SSF51306 158 560 6.8E-30 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TDE_2219 babd9f8bfa4f715c60866ed7d095c725 561 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 490 509 2.5E-14 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_2219 babd9f8bfa4f715c60866ed7d095c725 561 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 159 175 2.5E-14 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_2219 babd9f8bfa4f715c60866ed7d095c725 561 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 257 269 2.5E-14 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_1991 3fa3993054abd3fbd3f5b2ac21697c64 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 14 213 3.5E-17 T 12-10-2018 TDE_1991 3fa3993054abd3fbd3f5b2ac21697c64 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 2.0E-43 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_1832 93cc6cd995e571ccefe6eb316d00fbfa 249 Gene3D G3DSA:3.30.70.2970 54 169 1.2E-17 T 12-10-2018 TDE_1832 93cc6cd995e571ccefe6eb316d00fbfa 249 PIRSF PIRSF029033 1 232 1.9E-35 T 12-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein TDE_1832 93cc6cd995e571ccefe6eb316d00fbfa 249 Pfam PF04402 Protein of unknown function (DUF541) 42 221 4.3E-24 T 12-10-2018 IPR007497 Protein of unknown function DUF541 TDE_1832 93cc6cd995e571ccefe6eb316d00fbfa 249 Gene3D G3DSA:3.30.110.170 44 208 1.2E-17 T 12-10-2018 TDE_1796 93cc6cd995e571ccefe6eb316d00fbfa 249 Gene3D G3DSA:3.30.70.2970 54 169 1.2E-17 T 12-10-2018 TDE_1796 93cc6cd995e571ccefe6eb316d00fbfa 249 PIRSF PIRSF029033 1 232 1.9E-35 T 12-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein TDE_1796 93cc6cd995e571ccefe6eb316d00fbfa 249 Pfam PF04402 Protein of unknown function (DUF541) 42 221 4.3E-24 T 12-10-2018 IPR007497 Protein of unknown function DUF541 TDE_1796 93cc6cd995e571ccefe6eb316d00fbfa 249 Gene3D G3DSA:3.30.110.170 44 208 1.2E-17 T 12-10-2018 TDE_2513 281ec5ceb41117fc399c027585ff6805 254 Gene3D G3DSA:3.40.50.150 16 254 9.6E-50 T 12-10-2018 TDE_2513 281ec5ceb41117fc399c027585ff6805 254 Pfam PF02527 rRNA small subunit methyltransferase G 110 248 2.1E-31 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TDE_2513 281ec5ceb41117fc399c027585ff6805 254 Pfam PF02527 rRNA small subunit methyltransferase G 37 82 9.9E-8 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TDE_2513 281ec5ceb41117fc399c027585ff6805 254 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 38 253 9.9E-39 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TDE_2513 281ec5ceb41117fc399c027585ff6805 254 PIRSF PIRSF003078 7 254 1.6E-68 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TDE_2513 281ec5ceb41117fc399c027585ff6805 254 SUPERFAMILY SSF53335 30 253 1.52E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2513 281ec5ceb41117fc399c027585ff6805 254 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 27 250 20.923 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TDE_1951 ad90aa3000647628b6b7a2ff8f942711 308 Gene3D G3DSA:3.60.15.10 3 304 1.8E-89 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_1951 ad90aa3000647628b6b7a2ff8f942711 308 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 6 303 2.3E-111 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 TDE_1951 ad90aa3000647628b6b7a2ff8f942711 308 Pfam PF12706 Beta-lactamase superfamily domain 201 270 1.7E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_1951 ad90aa3000647628b6b7a2ff8f942711 308 SMART SM00849 20 233 0.003 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_1951 ad90aa3000647628b6b7a2ff8f942711 308 Hamap MF_01818 Ribonuclease BN [rbn]. 3 304 36.13 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 TDE_1951 ad90aa3000647628b6b7a2ff8f942711 308 Pfam PF00753 Metallo-beta-lactamase superfamily 22 107 1.2E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_1951 ad90aa3000647628b6b7a2ff8f942711 308 SUPERFAMILY SSF56281 7 304 2.16E-77 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 15 338 84.356 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 59 73 5.6E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 132 146 5.6E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 316 327 5.6E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 236 246 5.6E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 92 105 5.6E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 SUPERFAMILY SSF53671 12 337 5.63E-106 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 Gene3D G3DSA:3.40.50.1370 13 334 8.2E-144 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 162 335 1.3E-57 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 16 156 8.1E-48 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 61 68 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 143 154 6.4E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 302 325 6.4E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 273 282 6.4E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 61 80 6.4E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 Gene3D G3DSA:3.40.50.1370 159 324 8.2E-144 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TDE_0929 0c07417a8060a9d8a66ef4a28d536a1f 338 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 16 337 2.6E-130 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TDE_2669 5fddac3112ea0b3b82d40a615a0b09ca 260 Gene3D G3DSA:1.20.120.1760 60 184 4.3E-9 T 12-10-2018 TDE_2669 5fddac3112ea0b3b82d40a615a0b09ca 260 Pfam PF01066 CDP-alcohol phosphatidyltransferase 72 140 1.3E-13 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TDE_2669 5fddac3112ea0b3b82d40a615a0b09ca 260 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 118 140 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TDE_0992 fd39aec037971e564f5df9e193a62bc3 229 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 38 221 9.4E-33 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TDE_0992 fd39aec037971e564f5df9e193a62bc3 229 SUPERFAMILY SSF100950 17 227 8.65E-39 T 12-10-2018 IPR037171 NagB/RpiA transferase-like TDE_0992 fd39aec037971e564f5df9e193a62bc3 229 Gene3D G3DSA:3.40.50.10420 7 227 9.8E-44 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily TDE_0992 fd39aec037971e564f5df9e193a62bc3 229 PIRSF PIRSF006806 13 224 8.8E-32 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TDE_0992 fd39aec037971e564f5df9e193a62bc3 229 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 38 221 1.3E-30 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TDE_1343 b5a11f8388a45536e138dc8da150af29 536 SUPERFAMILY SSF50494 153 333 8.17E-43 T 12-10-2018 IPR009003 Peptidase S1, PA clan TDE_1343 b5a11f8388a45536e138dc8da150af29 536 PRINTS PR00834 HtrA/DegQ protease family signature 272 289 1.0E-24 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1343 b5a11f8388a45536e138dc8da150af29 536 PRINTS PR00834 HtrA/DegQ protease family signature 240 264 1.0E-24 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1343 b5a11f8388a45536e138dc8da150af29 536 PRINTS PR00834 HtrA/DegQ protease family signature 375 387 1.0E-24 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1343 b5a11f8388a45536e138dc8da150af29 536 PRINTS PR00834 HtrA/DegQ protease family signature 169 181 1.0E-24 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1343 b5a11f8388a45536e138dc8da150af29 536 Gene3D G3DSA:2.30.42.10 337 426 1.3E-9 T 12-10-2018 TDE_1343 b5a11f8388a45536e138dc8da150af29 536 Pfam PF13365 Trypsin-like peptidase domain 160 299 3.9E-25 T 12-10-2018 TDE_1343 b5a11f8388a45536e138dc8da150af29 536 Gene3D G3DSA:2.40.10.10 231 336 1.1E-29 T 12-10-2018 TDE_1343 b5a11f8388a45536e138dc8da150af29 536 SUPERFAMILY SSF50156 310 412 3.94E-12 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 TDE_1343 b5a11f8388a45536e138dc8da150af29 536 Gene3D G3DSA:2.40.10.10 129 228 2.9E-14 T 12-10-2018 TDE_1113 baf4a4f706a4d4eeb66c0c9727305630 173 Gene3D G3DSA:3.30.530.20 1 132 2.2E-6 T 12-10-2018 IPR023393 START-like domain superfamily TDE_1113 baf4a4f706a4d4eeb66c0c9727305630 173 SUPERFAMILY SSF55961 3 128 1.24E-9 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PIRSF PIRSF004557 3 435 1.3E-117 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 3.5E-87 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 3.5E-87 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 307 329 3.5E-87 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 19 37 3.5E-87 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 148 173 3.5E-87 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 112 135 3.5E-87 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 92 3.5E-87 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 174 197 3.5E-87 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 361 379 3.5E-87 T 12-10-2018 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 Pfam PF00344 SecY translocase 73 412 5.1E-105 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 419 5.4E-110 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 SUPERFAMILY SSF103491 6 418 1.31E-109 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TDE_0787 29d617943e578eae72fe6d2c36393e81 438 Hamap MF_01465 Protein translocase subunit SecY [secY]. 6 428 28.239 T 12-10-2018 IPR026593 Protein translocase subunit SecY TDE_0787 29d617943e578eae72fe6d2c36393e81 438 Gene3D G3DSA:1.10.3370.10 3 424 1.0E-144 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TDE_2250 88a4130eb5fee4711fbd904c5ebee672 253 Pfam PF04018 Domain of unknown function (DUF368) 19 251 7.1E-50 T 12-10-2018 IPR007163 Protein of unknown function DUF368 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 PIRSF PIRSF005499 1 698 3.9E-296 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 SUPERFAMILY SSF50249 613 691 3.8E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 SMART SM00316 620 690 1.9E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 SMART SM00322 551 617 4.0E-11 T 12-10-2018 IPR004087 K Homology domain GO:0003676 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Pfam PF01138 3' exoribonuclease family, domain 1 14 142 2.6E-16 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Pfam PF01138 3' exoribonuclease family, domain 1 323 454 1.5E-19 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 5.9E-302 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Gene3D G3DSA:3.30.230.70 1 228 3.6E-72 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 318 1.5E-16 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Pfam PF00575 S1 RNA binding domain 619 688 1.5E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Gene3D G3DSA:2.40.50.140 550 672 5.5E-46 T 12-10-2018 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 693 29.83 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 SUPERFAMILY SSF55666 143 234 8.77E-30 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Pfam PF00013 KH domain 556 601 1.3E-8 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 SUPERFAMILY SSF55666 449 547 1.7E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 SUPERFAMILY SSF54211 292 487 3.14E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 SUPERFAMILY SSF54791 554 640 1.25E-17 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 1.8E-14 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Pfam PF03725 3' exoribonuclease family, domain 2 458 528 1.7E-5 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 SUPERFAMILY SSF54211 5 142 9.62E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_1041 42768fe2e08b5ce29533b7d3750cec53 698 Gene3D G3DSA:3.30.230.70 234 549 3.2E-110 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TDE_0321 b0e236f71cf17bf65e90af9727ebe7de 439 SMART SM01091 358 436 2.0E-19 T 12-10-2018 IPR005170 Transporter-associated domain TDE_0321 b0e236f71cf17bf65e90af9727ebe7de 439 Pfam PF00571 CBS domain 284 330 0.0011 T 12-10-2018 IPR000644 CBS domain TDE_0321 b0e236f71cf17bf65e90af9727ebe7de 439 Pfam PF03471 Transporter associated domain 367 433 7.6E-18 T 12-10-2018 IPR005170 Transporter-associated domain TDE_0321 b0e236f71cf17bf65e90af9727ebe7de 439 SUPERFAMILY SSF56176 366 436 1.72E-17 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TDE_0321 b0e236f71cf17bf65e90af9727ebe7de 439 Pfam PF01595 Domain of unknown function DUF21 12 191 4.6E-48 T 12-10-2018 IPR002550 CNNM, transmembrane domain TDE_0321 b0e236f71cf17bf65e90af9727ebe7de 439 Gene3D G3DSA:3.30.465.10 346 434 1.3E-20 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TDE_0321 b0e236f71cf17bf65e90af9727ebe7de 439 Gene3D G3DSA:3.10.580.10 187 345 2.5E-46 T 12-10-2018 TDE_0321 b0e236f71cf17bf65e90af9727ebe7de 439 SUPERFAMILY SSF54631 201 344 7.96E-28 T 12-10-2018 TDE_1558 81d8f99092699780dd9b62d46cc96357 3320 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 1875 2033 4.7E-53 T 12-10-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal TDE_1558 81d8f99092699780dd9b62d46cc96357 3320 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 3008 3113 9.3E-17 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 TDE_1558 81d8f99092699780dd9b62d46cc96357 3320 SUPERFAMILY SSF69318 511 1663 1.74E-9 T 12-10-2018 TDE_1558 81d8f99092699780dd9b62d46cc96357 3320 Gene3D G3DSA:2.180.10.10 2789 3113 6.0E-50 T 12-10-2018 TDE_1558 81d8f99092699780dd9b62d46cc96357 3320 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 214 287 6.6E-11 T 12-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 69 640 1.2E-160 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 SUPERFAMILY SSF81653 127 219 1.31E-18 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 Gene3D G3DSA:3.40.50.1000 311 590 7.1E-72 T 12-10-2018 IPR023214 HAD superfamily TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 Gene3D G3DSA:3.40.1110.10 341 463 7.1E-72 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 332 338 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 622 4.7E-63 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 SUPERFAMILY SSF81665 59 636 3.01E-10 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 Gene3D G3DSA:2.70.150.20 112 224 1.6E-28 T 12-10-2018 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 SUPERFAMILY SSF56784 329 639 1.51E-51 T 12-10-2018 IPR036412 HAD-like superfamily TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 Pfam PF00122 E1-E2 ATPase 119 310 1.6E-41 T 12-10-2018 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 Pfam PF00702 haloacid dehalogenase-like hydrolase 327 552 2.6E-28 T 12-10-2018 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 557 1.8E-21 T 12-10-2018 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 330 344 1.8E-21 T 12-10-2018 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 479 489 1.8E-21 T 12-10-2018 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 169 183 1.8E-21 T 12-10-2018 TDE_1384 cd3f160bb54a7bb0e82e8d61aeb0e451 643 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 574 1.8E-21 T 12-10-2018 TDE_0387 25f6f2f1b276f4ce1efd31f86aa934aa 249 Gene3D G3DSA:3.30.420.40 94 232 9.1E-70 T 12-10-2018 TDE_0387 25f6f2f1b276f4ce1efd31f86aa934aa 249 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 4 248 3.6E-72 T 12-10-2018 IPR008275 CoA enzyme activase TDE_0387 25f6f2f1b276f4ce1efd31f86aa934aa 249 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 248 6.1E-52 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 TDE_0387 25f6f2f1b276f4ce1efd31f86aa934aa 249 SUPERFAMILY SSF53067 3 248 1.19E-41 T 12-10-2018 TDE_0387 25f6f2f1b276f4ce1efd31f86aa934aa 249 Gene3D G3DSA:3.30.420.40 4 248 9.1E-70 T 12-10-2018 TDE_1547 67d7349e3119cfe680f1fb865f8d138f 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 1 196 31.033 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 TDE_1547 67d7349e3119cfe680f1fb865f8d138f 198 Gene3D G3DSA:3.30.420.10 1 198 7.3E-65 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_1547 67d7349e3119cfe680f1fb865f8d138f 198 Pfam PF01351 Ribonuclease HII 3 193 2.0E-30 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain TDE_1547 67d7349e3119cfe680f1fb865f8d138f 198 SUPERFAMILY SSF53098 2 193 7.44E-56 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_1063 566cb14d3098208e924afa2df832fe39 793 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 523 4.5E-172 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TDE_1063 566cb14d3098208e924afa2df832fe39 793 Gene3D G3DSA:2.20.28.20 138 172 8.9E-167 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TDE_1063 566cb14d3098208e924afa2df832fe39 793 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 577 37.376 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TDE_1063 566cb14d3098208e924afa2df832fe39 793 SUPERFAMILY SSF57770 138 172 2.88E-11 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TDE_1063 566cb14d3098208e924afa2df832fe39 793 SUPERFAMILY SSF50249 625 733 2.69E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1063 566cb14d3098208e924afa2df832fe39 793 Gene3D G3DSA:1.10.730.10 382 578 6.7E-30 T 12-10-2018 TDE_1063 566cb14d3098208e924afa2df832fe39 793 SUPERFAMILY SSF52374 2 386 9.38E-91 T 12-10-2018 TDE_1063 566cb14d3098208e924afa2df832fe39 793 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1063 566cb14d3098208e924afa2df832fe39 793 Gene3D G3DSA:2.40.50.140 618 789 7.2E-34 T 12-10-2018 TDE_1063 566cb14d3098208e924afa2df832fe39 793 SUPERFAMILY SSF47323 387 522 8.22E-26 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1063 566cb14d3098208e924afa2df832fe39 793 Pfam PF09334 tRNA synthetases class I (M) 5 398 1.6E-158 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1063 566cb14d3098208e924afa2df832fe39 793 Pfam PF01588 Putative tRNA binding domain 628 716 1.8E-24 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 TDE_1063 566cb14d3098208e924afa2df832fe39 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 5.9E-29 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TDE_1063 566cb14d3098208e924afa2df832fe39 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 5.9E-29 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TDE_1063 566cb14d3098208e924afa2df832fe39 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 5.9E-29 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TDE_1063 566cb14d3098208e924afa2df832fe39 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 5.9E-29 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TDE_1063 566cb14d3098208e924afa2df832fe39 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 5.9E-29 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TDE_1063 566cb14d3098208e924afa2df832fe39 793 PRINTS PR01041 Methionyl-tRNA synthetase signature 386 397 5.9E-29 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TDE_1063 566cb14d3098208e924afa2df832fe39 793 Gene3D G3DSA:3.40.50.620 5 381 8.9E-167 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_0439 8b41da2083e803353fcba95b0e23dc64 239 Pfam PF10895 Domain of unknown function (DUF2715) 21 239 2.4E-18 T 12-10-2018 IPR024471 Protein of unknown function DUF2715 TDE_1062 20d7a0e8fbb62f029e0698849ea22a9d 625 Gene3D G3DSA:3.40.50.300 369 619 5.3E-70 T 12-10-2018 TDE_1062 20d7a0e8fbb62f029e0698849ea22a9d 625 SMART SM00382 405 598 1.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1062 20d7a0e8fbb62f029e0698849ea22a9d 625 Pfam PF00005 ABC transporter 396 546 2.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1062 20d7a0e8fbb62f029e0698849ea22a9d 625 SUPERFAMILY SSF52540 376 616 1.01E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1062 20d7a0e8fbb62f029e0698849ea22a9d 625 Gene3D G3DSA:1.20.1560.10 1 361 2.9E-8 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1062 20d7a0e8fbb62f029e0698849ea22a9d 625 SUPERFAMILY SSF90123 21 347 1.12E-9 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0938 d6586d114b372e3c883a4016e0fcb810 403 Pfam PF01170 Putative RNA methylase family UPF0020 173 384 5.6E-36 T 12-10-2018 IPR000241 Putative RNA methylase domain TDE_0938 d6586d114b372e3c883a4016e0fcb810 403 SUPERFAMILY SSF53335 157 373 1.28E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0938 d6586d114b372e3c883a4016e0fcb810 403 Gene3D G3DSA:3.30.2130.30 13 256 1.7E-102 T 12-10-2018 TDE_0938 d6586d114b372e3c883a4016e0fcb810 403 Gene3D G3DSA:3.40.50.150 171 397 1.7E-102 T 12-10-2018 TDE_0938 d6586d114b372e3c883a4016e0fcb810 403 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 328 334 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TDE_0938 d6586d114b372e3c883a4016e0fcb810 403 Pfam PF02926 THUMP domain 50 164 1.4E-4 T 12-10-2018 IPR004114 THUMP domain GO:0003723 TDE_2654 b30cae1838be4624e8ae176240f79f3b 414 SUPERFAMILY SSF103473 3 397 5.23E-34 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_2654 b30cae1838be4624e8ae176240f79f3b 414 Gene3D G3DSA:1.20.1250.20 1 399 5.1E-28 T 12-10-2018 TDE_2654 b30cae1838be4624e8ae176240f79f3b 414 Pfam PF07690 Major Facilitator Superfamily 7 341 1.2E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TDE_2501 3b4bde91ae014bdf5cb7663f39c705e8 324 Pfam PF00072 Response regulator receiver domain 207 315 9.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_2501 3b4bde91ae014bdf5cb7663f39c705e8 324 SMART SM00448 205 316 3.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_2501 3b4bde91ae014bdf5cb7663f39c705e8 324 Gene3D G3DSA:3.40.50.2300 195 323 4.4E-30 T 12-10-2018 TDE_2501 3b4bde91ae014bdf5cb7663f39c705e8 324 SUPERFAMILY SSF52172 204 321 2.56E-30 T 12-10-2018 IPR011006 CheY-like superfamily TDE_0045 741475976423821cb8f6688b6092df4b 614 SUPERFAMILY SSF52540 344 601 2.22E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0045 741475976423821cb8f6688b6092df4b 614 Gene3D G3DSA:1.20.1560.10 1 328 7.5E-10 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0045 741475976423821cb8f6688b6092df4b 614 SMART SM00382 386 585 1.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0045 741475976423821cb8f6688b6092df4b 614 Gene3D G3DSA:3.40.50.300 342 611 1.5E-61 T 12-10-2018 TDE_0045 741475976423821cb8f6688b6092df4b 614 Pfam PF00005 ABC transporter 378 531 2.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0045 741475976423821cb8f6688b6092df4b 614 SUPERFAMILY SSF90123 11 310 7.46E-19 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 SUPERFAMILY SSF144052 3 408 1.24E-138 T 12-10-2018 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 155 177 1.3E-57 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 300 320 1.3E-57 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 362 384 1.3E-57 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 323 344 1.3E-57 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 388 407 1.3E-57 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 244 263 1.3E-57 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 14 31 1.3E-57 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 Pfam PF02073 Thermophilic metalloprotease (M29) 4 407 5.4E-162 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 TDE_2337 e5488eff89a4da3b878c09c2dae1ea78 409 Gene3D G3DSA:3.40.1830.10 1 179 1.2E-59 T 12-10-2018 IPR035097 Peptidase M29, N-terminal TDE_0346 37ec2ab04b6b158be1845257fdcc904c 274 Gene3D G3DSA:3.30.450.20 105 195 8.9E-18 T 12-10-2018 TDE_0346 37ec2ab04b6b158be1845257fdcc904c 274 SUPERFAMILY SSF103190 83 207 3.14E-14 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_0346 37ec2ab04b6b158be1845257fdcc904c 274 Pfam PF02743 Cache domain 58 272 1.5E-22 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_0928 8efede7d75561f857a42112c166ed11d 256 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0928 8efede7d75561f857a42112c166ed11d 256 Pfam PF00005 ABC transporter 19 175 5.0E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0928 8efede7d75561f857a42112c166ed11d 256 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 2 241 8.9E-100 T 12-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 TDE_0928 8efede7d75561f857a42112c166ed11d 256 Gene3D G3DSA:3.40.50.300 1 250 7.7E-69 T 12-10-2018 TDE_0928 8efede7d75561f857a42112c166ed11d 256 SUPERFAMILY SSF52540 2 237 3.17E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0928 8efede7d75561f857a42112c166ed11d 256 SMART SM00382 28 248 2.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0898 5a97385164e6710c5c866e7840c78af1 199 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 8 191 3.4E-40 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_0898 5a97385164e6710c5c866e7840c78af1 199 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 6 192 9.4E-56 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_0576 731ffa474dbce53b9e0cdb8bf2db04f8 485 ProSitePatterns PS00571 Amidases signature. 155 186 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TDE_0576 731ffa474dbce53b9e0cdb8bf2db04f8 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 10 485 76.311 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TDE_0576 731ffa474dbce53b9e0cdb8bf2db04f8 485 SUPERFAMILY SSF75304 2 482 1.96E-138 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TDE_0576 731ffa474dbce53b9e0cdb8bf2db04f8 485 Pfam PF01425 Amidase 42 474 5.0E-139 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TDE_0576 731ffa474dbce53b9e0cdb8bf2db04f8 485 Gene3D G3DSA:3.90.1300.10 2 485 4.8E-164 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TDE_0576 731ffa474dbce53b9e0cdb8bf2db04f8 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 483 1.9E-158 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 SMART SM00448 1 114 4.2E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 SMART SM00421 154 211 1.1E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 211 4.5E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 SUPERFAMILY SSF46894 145 217 1.43E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 Gene3D G3DSA:3.40.50.12740 1 217 3.2E-64 T 12-10-2018 TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 Pfam PF00072 Response regulator receiver domain 3 112 6.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 SUPERFAMILY SSF52172 1 131 5.27E-33 T 12-10-2018 IPR011006 CheY-like superfamily TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.7E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.7E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_2324 21304afe4d8b42bf823be781a3633dc8 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.7E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_1710 38d359e9771c8ab21dfc524e4f0eb716 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 16 88 9.0E-6 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1710 38d359e9771c8ab21dfc524e4f0eb716 89 SUPERFAMILY SSF46992 3 85 1.7E-24 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1710 38d359e9771c8ab21dfc524e4f0eb716 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 84 14.578 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1710 38d359e9771c8ab21dfc524e4f0eb716 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 79 2.6E-19 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1710 38d359e9771c8ab21dfc524e4f0eb716 89 Gene3D G3DSA:1.20.58.110 1 89 1.8E-22 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1710 38d359e9771c8ab21dfc524e4f0eb716 89 Pfam PF01649 Ribosomal protein S20 3 80 2.6E-22 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0478 5b0ba3184e73aa23f90b5e9ec72e9e30 216 Pfam PF13545 Crp-like helix-turn-helix domain 149 214 1.2E-12 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TDE_0478 5b0ba3184e73aa23f90b5e9ec72e9e30 216 Pfam PF00027 Cyclic nucleotide-binding domain 26 105 8.0E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_0478 5b0ba3184e73aa23f90b5e9ec72e9e30 216 SUPERFAMILY SSF46785 145 208 1.82E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0478 5b0ba3184e73aa23f90b5e9ec72e9e30 216 Gene3D G3DSA:2.60.120.1460 1 212 2.6E-52 T 12-10-2018 TDE_0478 5b0ba3184e73aa23f90b5e9ec72e9e30 216 SUPERFAMILY SSF51206 2 139 1.57E-21 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_1495 4d1515c2d9ed9b784fafa1e0eefb29bc 206 SUPERFAMILY SSF46894 120 191 1.96E-8 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TDE_1495 4d1515c2d9ed9b784fafa1e0eefb29bc 206 Pfam PF00486 Transcriptional regulatory protein, C terminal 128 188 4.8E-6 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TDE_1495 4d1515c2d9ed9b784fafa1e0eefb29bc 206 Gene3D G3DSA:1.10.10.10 106 204 3.2E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1886 b99d2f28aa6c137b466e30186608e471 468 SMART SM00729 182 397 3.3E-45 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_1886 b99d2f28aa6c137b466e30186608e471 468 Gene3D G3DSA:3.80.30.20 181 407 2.8E-68 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TDE_1886 b99d2f28aa6c137b466e30186608e471 468 Pfam PF00919 Uncharacterized protein family UPF0004 7 102 1.2E-17 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TDE_1886 b99d2f28aa6c137b466e30186608e471 468 Gene3D G3DSA:3.40.50.12160 5 143 1.2E-16 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TDE_1886 b99d2f28aa6c137b466e30186608e471 468 Pfam PF04055 Radical SAM superfamily 188 353 1.7E-21 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_1886 b99d2f28aa6c137b466e30186608e471 468 SUPERFAMILY SSF102114 183 403 5.23E-50 T 12-10-2018 TDE_1886 b99d2f28aa6c137b466e30186608e471 468 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 9 446 2.5E-127 T 12-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 TDE_1886 b99d2f28aa6c137b466e30186608e471 468 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 186 206 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TDE_2434 4a8e0bf83609539922cb757a2f0e2c07 785 SUPERFAMILY SSF88713 573 782 6.67E-24 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TDE_2434 4a8e0bf83609539922cb757a2f0e2c07 785 SUPERFAMILY SSF69304 91 308 3.66E-11 T 12-10-2018 TDE_2434 4a8e0bf83609539922cb757a2f0e2c07 785 Pfam PF01522 Polysaccharide deacetylase 574 698 3.0E-10 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 TDE_2434 4a8e0bf83609539922cb757a2f0e2c07 785 Gene3D G3DSA:2.120.10.30 60 194 3.5E-5 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TDE_2434 4a8e0bf83609539922cb757a2f0e2c07 785 Gene3D G3DSA:3.20.20.370 544 784 1.2E-27 T 12-10-2018 TDE_2570 a7e5cf4d245846c08bb2877803944873 160 Hamap MF_00042 Ribonuclease H [rnhA]. 1 159 28.95 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 TDE_2570 a7e5cf4d245846c08bb2877803944873 160 Pfam PF00075 RNase H 3 156 7.0E-46 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 TDE_2570 a7e5cf4d245846c08bb2877803944873 160 SUPERFAMILY SSF53098 3 158 1.52E-50 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_2570 a7e5cf4d245846c08bb2877803944873 160 Gene3D G3DSA:3.30.420.10 1 160 2.4E-55 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_1587 3ab21824ba75c685366df230608f8759 590 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 5 589 33.174 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TDE_1587 3ab21824ba75c685366df230608f8759 590 Pfam PF02938 GAD domain 315 410 1.2E-26 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 TDE_1587 3ab21824ba75c685366df230608f8759 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 479 495 7.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1587 3ab21824ba75c685366df230608f8759 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 209 7.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1587 3ab21824ba75c685366df230608f8759 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 523 537 7.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1587 3ab21824ba75c685366df230608f8759 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 227 7.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1587 3ab21824ba75c685366df230608f8759 590 SUPERFAMILY SSF50249 6 110 1.31E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1587 3ab21824ba75c685366df230608f8759 590 SUPERFAMILY SSF55261 296 423 5.07E-32 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TDE_1587 3ab21824ba75c685366df230608f8759 590 Gene3D G3DSA:2.40.50.140 1 112 1.7E-33 T 12-10-2018 TDE_1587 3ab21824ba75c685366df230608f8759 590 Gene3D G3DSA:3.30.930.10 123 586 8.0E-190 T 12-10-2018 TDE_1587 3ab21824ba75c685366df230608f8759 590 Gene3D G3DSA:3.30.1360.30 279 424 8.0E-190 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TDE_1587 3ab21824ba75c685366df230608f8759 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 562 8.5E-104 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1587 3ab21824ba75c685366df230608f8759 590 SUPERFAMILY SSF55681 119 586 3.94E-102 T 12-10-2018 TDE_1587 3ab21824ba75c685366df230608f8759 590 Pfam PF01336 OB-fold nucleic acid binding domain 22 107 2.6E-14 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TDE_1587 3ab21824ba75c685366df230608f8759 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 586 1.2E-223 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TDE_1959 4c29606b4f13655e0bd8032e1c08dfff 130 SUPERFAMILY SSF143100 1 66 5.23E-18 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like TDE_1959 4c29606b4f13655e0bd8032e1c08dfff 130 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 5 104 1.3E-18 T 12-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system TDE_1959 4c29606b4f13655e0bd8032e1c08dfff 130 Gene3D G3DSA:3.30.160.250 1 94 1.1E-25 T 12-10-2018 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 SUPERFAMILY SSF58104 412 649 4.97E-44 T 12-10-2018 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 SMART SM00304 310 364 9.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 Gene3D G3DSA:3.30.450.20 147 292 4.4E-26 T 12-10-2018 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 Gene3D G3DSA:1.10.287.950 432 651 2.7E-40 T 12-10-2018 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 621 6.6E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 SMART SM00283 407 654 1.0E-64 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 SUPERFAMILY SSF58104 332 432 3.14E-7 T 12-10-2018 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 Pfam PF02743 Cache domain 46 272 1.4E-23 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 Gene3D G3DSA:1.10.287.950 310 430 9.1E-10 T 12-10-2018 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 582 611 2.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 505 532 2.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 2.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_1009 81bd7ad5e56f751878f4ab23458836e5 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 534 563 2.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_1092 8711cf93284a173fcc7e66282cf85b65 1119 Pfam PF13432 Tetratricopeptide repeat 913 968 5.5E-4 T 12-10-2018 TDE_1092 8711cf93284a173fcc7e66282cf85b65 1119 SMART SM00028 809 842 9.9 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1092 8711cf93284a173fcc7e66282cf85b65 1119 SMART SM00028 587 620 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1092 8711cf93284a173fcc7e66282cf85b65 1119 SMART SM00028 900 934 68.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1092 8711cf93284a173fcc7e66282cf85b65 1119 SMART SM00028 935 968 2.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1092 8711cf93284a173fcc7e66282cf85b65 1119 Gene3D G3DSA:1.25.40.10 770 1086 1.7E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1092 8711cf93284a173fcc7e66282cf85b65 1119 SUPERFAMILY SSF48452 586 841 2.19E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1092 8711cf93284a173fcc7e66282cf85b65 1119 Gene3D G3DSA:1.25.40.10 589 752 2.2E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1092 8711cf93284a173fcc7e66282cf85b65 1119 SUPERFAMILY SSF48452 796 998 1.83E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1721 0daa59a94898419a6f1d5a1f727c807d 302 TIGRFAM TIGR04470 rSAM_mob_pairB: radical SAM mobile pair protein B 10 294 4.7E-183 T 12-10-2018 IPR031012 Radical SAM mobile pair protein B TDE_1721 0daa59a94898419a6f1d5a1f727c807d 302 Gene3D G3DSA:3.80.30.30 76 262 2.3E-6 T 12-10-2018 TDE_1721 0daa59a94898419a6f1d5a1f727c807d 302 SUPERFAMILY SSF102114 29 194 2.75E-13 T 12-10-2018 TDE_1721 0daa59a94898419a6f1d5a1f727c807d 302 Pfam PF04055 Radical SAM superfamily 31 191 1.6E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_1887 1d356e8eb5457472025c1e06cc8586b2 213 SUPERFAMILY SSF48452 33 203 6.32E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1887 1d356e8eb5457472025c1e06cc8586b2 213 Pfam PF13432 Tetratricopeptide repeat 35 60 0.011 T 12-10-2018 TDE_1887 1d356e8eb5457472025c1e06cc8586b2 213 Pfam PF13181 Tetratricopeptide repeat 169 198 0.091 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1887 1d356e8eb5457472025c1e06cc8586b2 213 Gene3D G3DSA:1.25.40.10 133 212 1.2E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1887 1d356e8eb5457472025c1e06cc8586b2 213 SMART SM00028 132 165 28.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1887 1d356e8eb5457472025c1e06cc8586b2 213 SMART SM00028 27 60 150.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1887 1d356e8eb5457472025c1e06cc8586b2 213 SMART SM00028 166 199 0.11 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1887 1d356e8eb5457472025c1e06cc8586b2 213 SMART SM00028 95 128 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1887 1d356e8eb5457472025c1e06cc8586b2 213 Gene3D G3DSA:1.25.40.10 24 132 3.7E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 Pfam PF13541 Subunit ChlI of Mg-chelatase 340 431 8.1E-14 T 12-10-2018 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 SUPERFAMILY SSF54211 258 461 9.86E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 Gene3D G3DSA:3.40.50.300 68 286 2.3E-39 T 12-10-2018 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 SMART SM00382 93 248 1.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 455 2.2E-140 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 PRINTS PR01874 DNA repair protein radA signature 85 113 1.6E-76 T 12-10-2018 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 PRINTS PR01874 DNA repair protein radA signature 178 202 1.6E-76 T 12-10-2018 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 PRINTS PR01874 DNA repair protein radA signature 128 145 1.6E-76 T 12-10-2018 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 PRINTS PR01874 DNA repair protein radA signature 251 277 1.6E-76 T 12-10-2018 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 PRINTS PR01874 DNA repair protein radA signature 217 245 1.6E-76 T 12-10-2018 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 PRINTS PR01874 DNA repair protein radA signature 326 349 1.6E-76 T 12-10-2018 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 PRINTS PR01874 DNA repair protein radA signature 13 37 1.6E-76 T 12-10-2018 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 Hamap MF_01498 DNA repair protein RadA [radA]. 24 460 40.257 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 SUPERFAMILY SSF52540 71 291 4.79E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 Gene3D G3DSA:3.30.230.10 308 461 2.9E-17 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_2517 d4962553275472e6ddbe307ee2b313e4 462 Pfam PF13481 AAA domain 82 226 1.5E-10 T 12-10-2018 TDE_2009 15b2d67805f26b74b04aa0abde599ff0 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 74 256 3.5E-67 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TDE_2009 15b2d67805f26b74b04aa0abde599ff0 261 Gene3D G3DSA:2.50.20.10 23 257 1.1E-81 T 12-10-2018 TDE_1599 229d93095c5e3f2ef32f0ca63f1ea6e7 574 Gene3D G3DSA:1.20.1560.10 313 324 5.0E-96 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1599 229d93095c5e3f2ef32f0ca63f1ea6e7 574 Gene3D G3DSA:1.20.1560.10 3 308 7.0E-20 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1599 229d93095c5e3f2ef32f0ca63f1ea6e7 574 Pfam PF00664 ABC transporter transmembrane region 60 287 4.0E-14 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_1599 229d93095c5e3f2ef32f0ca63f1ea6e7 574 Pfam PF00005 ABC transporter 347 496 4.6E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1599 229d93095c5e3f2ef32f0ca63f1ea6e7 574 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1599 229d93095c5e3f2ef32f0ca63f1ea6e7 574 Gene3D G3DSA:3.40.50.300 325 566 5.0E-96 T 12-10-2018 TDE_1599 229d93095c5e3f2ef32f0ca63f1ea6e7 574 SMART SM00382 356 542 2.2E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1599 229d93095c5e3f2ef32f0ca63f1ea6e7 574 SUPERFAMILY SSF52540 323 564 1.52E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1599 229d93095c5e3f2ef32f0ca63f1ea6e7 574 SUPERFAMILY SSF90123 6 319 2.62E-36 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 60 71 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 SUPERFAMILY SSF54686 4 133 2.75E-52 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 Gene3D G3DSA:3.90.1170.10 1 139 3.3E-53 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 Pfam PF00252 Ribosomal protein L16p/L10e 5 132 1.4E-48 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 PRINTS PR00060 Ribosomal protein L16 signature 89 118 2.2E-36 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 PRINTS PR00060 Ribosomal protein L16 signature 59 88 2.2E-36 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 PRINTS PR00060 Ribosomal protein L16 signature 25 37 2.2E-36 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 PRINTS PR00060 Ribosomal protein L16 signature 43 54 2.2E-36 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 4 127 1.7E-58 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0774 e1d7e70f41a17c7a0a31ff3d2ab34571 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 37.282 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1314 954131e311ca3b63bba095adb06efd95 620 Gene3D G3DSA:3.90.1310.30 43 199 3.1E-33 T 12-10-2018 TDE_1314 954131e311ca3b63bba095adb06efd95 620 SUPERFAMILY SSF56519 46 190 2.88E-31 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TDE_1314 954131e311ca3b63bba095adb06efd95 620 Pfam PF03793 PASTA domain 567 619 1.2E-8 T 12-10-2018 IPR005543 PASTA domain TDE_1314 954131e311ca3b63bba095adb06efd95 620 SUPERFAMILY SSF56601 197 540 6.83E-77 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TDE_1314 954131e311ca3b63bba095adb06efd95 620 SMART SM00740 562 620 2.2E-4 T 12-10-2018 IPR005543 PASTA domain TDE_1314 954131e311ca3b63bba095adb06efd95 620 Pfam PF00905 Penicillin binding protein transpeptidase domain 224 529 7.1E-55 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TDE_1314 954131e311ca3b63bba095adb06efd95 620 SUPERFAMILY SSF54184 567 619 2.49E-9 T 12-10-2018 TDE_1314 954131e311ca3b63bba095adb06efd95 620 Pfam PF03717 Penicillin-binding Protein dimerisation domain 49 162 3.1E-12 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TDE_1314 954131e311ca3b63bba095adb06efd95 620 Gene3D G3DSA:3.30.450.330 200 536 6.3E-85 T 12-10-2018 TDE_1314 954131e311ca3b63bba095adb06efd95 620 Gene3D G3DSA:3.40.710.10 258 452 6.3E-85 T 12-10-2018 TDE_0353 554ef06b1baf4c43b3a9a1ef31ef5869 531 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 304 462 2.0E-10 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain TDE_0353 554ef06b1baf4c43b3a9a1ef31ef5869 531 SUPERFAMILY SSF51735 1 170 1.75E-10 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0353 554ef06b1baf4c43b3a9a1ef31ef5869 531 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 118 7.2E-18 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain TDE_0353 554ef06b1baf4c43b3a9a1ef31ef5869 531 SUPERFAMILY SSF52266 282 529 1.32E-24 T 12-10-2018 TDE_0353 554ef06b1baf4c43b3a9a1ef31ef5869 531 Gene3D G3DSA:3.40.50.720 1 174 4.9E-24 T 12-10-2018 TDE_2064 282c25754e3d5ae5356c4bcc8185c6ac 74 Gene3D G3DSA:2.30.30.90 1 74 3.3E-21 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain TDE_2064 282c25754e3d5ae5356c4bcc8185c6ac 74 SMART SM00899 1 73 5.8E-21 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 TDE_2064 282c25754e3d5ae5356c4bcc8185c6ac 74 Pfam PF04023 FeoA domain 1 72 3.5E-17 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 TDE_2064 282c25754e3d5ae5356c4bcc8185c6ac 74 SUPERFAMILY SSF50037 4 73 2.98E-17 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal TDE_0231 cbbe92573c07768c24502939902365fa 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.1E-26 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 TDE_0231 cbbe92573c07768c24502939902365fa 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.9E-104 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TDE_0231 cbbe92573c07768c24502939902365fa 367 SMART SM00480 17 362 3.9E-111 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TDE_0231 cbbe92573c07768c24502939902365fa 367 Gene3D G3DSA:3.10.150.10 1 242 6.3E-109 T 12-10-2018 TDE_0231 cbbe92573c07768c24502939902365fa 367 SUPERFAMILY SSF55979 245 365 3.82E-30 T 12-10-2018 TDE_0231 cbbe92573c07768c24502939902365fa 367 SUPERFAMILY SSF55979 1 119 1.13E-19 T 12-10-2018 TDE_0231 cbbe92573c07768c24502939902365fa 367 PIRSF PIRSF000804 1 367 1.4E-110 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TDE_0231 cbbe92573c07768c24502939902365fa 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 365 1.7E-26 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TDE_0231 cbbe92573c07768c24502939902365fa 367 SUPERFAMILY SSF55979 127 244 1.33E-24 T 12-10-2018 TDE_0231 cbbe92573c07768c24502939902365fa 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 3.8E-24 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TDE_0231 cbbe92573c07768c24502939902365fa 367 Gene3D G3DSA:3.70.10.10 138 364 6.3E-109 T 12-10-2018 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 Hamap MF_00974 DNA primase [dnaG]. 3 541 26.014 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 Pfam PF01807 CHC2 zinc finger 5 98 4.3E-38 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 TIGRFAM TIGR01391 dnaG: DNA primase 4 413 4.8E-136 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 Gene3D G3DSA:3.90.980.10 109 238 2.8E-36 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 Pfam PF10410 DnaB-helicase binding domain of primase 365 419 7.9E-9 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 SUPERFAMILY SSF56731 115 420 9.42E-93 T 12-10-2018 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 SMART SM00493 257 328 4.5E-20 T 12-10-2018 IPR006171 TOPRIM domain TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 PIRSF PIRSF002811 1 584 1.6E-169 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 SMART SM00400 35 89 3.0E-32 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 Pfam PF08275 DNA primase catalytic core, N-terminal domain 130 249 1.2E-35 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 Pfam PF13155 Toprim-like 260 344 9.7E-19 T 12-10-2018 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 SUPERFAMILY SSF57783 1 96 1.19E-33 T 12-10-2018 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 Gene3D G3DSA:3.90.580.10 2 99 4.2E-37 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 TDE_1345 e7f9f792e08f69a88bbb7377359032cc 595 Gene3D G3DSA:3.40.1360.10 239 361 2.6E-39 T 12-10-2018 TDE_0127 7387f52669ddc93f54faca98c1da73c1 104 SMART SM00530 12 67 1.7E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_0127 7387f52669ddc93f54faca98c1da73c1 104 SUPERFAMILY SSF47413 4 72 6.5E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_0127 7387f52669ddc93f54faca98c1da73c1 104 Gene3D G3DSA:1.10.260.40 2 73 1.1E-15 T 12-10-2018 TDE_0127 7387f52669ddc93f54faca98c1da73c1 104 Pfam PF12844 Helix-turn-helix domain 11 72 1.3E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 SUPERFAMILY SSF103190 56 185 3.66E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 Gene3D G3DSA:3.30.450.20 145 290 9.9E-25 T 12-10-2018 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 Pfam PF00672 HAMP domain 309 357 7.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 SUPERFAMILY SSF58104 331 433 2.62E-9 T 12-10-2018 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 621 7.7E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 Gene3D G3DSA:1.10.287.950 309 421 1.2E-11 T 12-10-2018 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 SMART SM00283 406 653 1.1E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 2.6E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 581 610 2.6E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 2.6E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 2.6E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 SMART SM00304 309 363 3.8E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 SUPERFAMILY SSF58104 419 650 1.11E-45 T 12-10-2018 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 Gene3D G3DSA:1.10.287.950 431 649 2.3E-42 T 12-10-2018 TDE_0619 b8d2e7fff31152d8be5404d527a6986f 696 Pfam PF02743 Cache domain 37 272 6.2E-27 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_0119 a555e6e684caa3e51598f01298aff6bc 146 Pfam PF02561 Flagellar protein FliS 9 126 1.3E-36 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TDE_0119 a555e6e684caa3e51598f01298aff6bc 146 SUPERFAMILY SSF101116 6 128 4.32E-33 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 TDE_0119 a555e6e684caa3e51598f01298aff6bc 146 Gene3D G3DSA:1.20.120.340 1 130 2.5E-40 T 12-10-2018 TDE_0119 a555e6e684caa3e51598f01298aff6bc 146 PIRSF PIRSF039090 2 137 6.3E-31 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TDE_0119 a555e6e684caa3e51598f01298aff6bc 146 TIGRFAM TIGR00208 fliS: flagellar protein FliS 5 129 1.3E-25 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 SUPERFAMILY SSF52096 26 303 1.58E-87 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 Gene3D G3DSA:3.90.226.10 4 305 3.6E-104 T 12-10-2018 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 10 135 1.3E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 303 42.938 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 10 304 2.7E-120 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 121 137 3.7E-40 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 75 86 3.7E-40 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 140 153 3.7E-40 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 100 118 3.7E-40 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 184 193 3.7E-40 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0589 7a0770438bfee8ac02bbe7455e2e7871 305 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.7E-40 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_1492 0976f54648628a17de2263087b793e7a 444 Gene3D G3DSA:2.40.50.180 48 166 1.3E-35 T 12-10-2018 TDE_1492 0976f54648628a17de2263087b793e7a 444 SMART SM00260 27 166 8.9E-47 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TDE_1492 0976f54648628a17de2263087b793e7a 444 SMART SM00138 200 442 2.1E-26 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_1492 0976f54648628a17de2263087b793e7a 444 PRINTS PR00996 Glutamate methyltransferase family signature 382 396 1.3E-10 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_1492 0976f54648628a17de2263087b793e7a 444 PRINTS PR00996 Glutamate methyltransferase family signature 287 307 1.3E-10 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_1492 0976f54648628a17de2263087b793e7a 444 PRINTS PR00996 Glutamate methyltransferase family signature 401 424 1.3E-10 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TDE_1492 0976f54648628a17de2263087b793e7a 444 Gene3D G3DSA:2.30.30.40 33 160 1.3E-35 T 12-10-2018 TDE_1492 0976f54648628a17de2263087b793e7a 444 SUPERFAMILY SSF53335 261 433 4.37E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1492 0976f54648628a17de2263087b793e7a 444 Pfam PF01739 CheR methyltransferase, SAM binding domain 262 437 1.7E-48 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TDE_1492 0976f54648628a17de2263087b793e7a 444 Gene3D G3DSA:3.40.50.150 262 443 1.1E-26 T 12-10-2018 TDE_1492 0976f54648628a17de2263087b793e7a 444 SUPERFAMILY SSF50341 31 169 3.01E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TDE_1492 0976f54648628a17de2263087b793e7a 444 Pfam PF01584 CheW-like domain 32 168 1.8E-32 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TDE_0910 51dd49186d1fe9140b261cbe093279d0 570 Pfam PF10592 AIPR protein 261 538 1.8E-53 T 12-10-2018 IPR018891 Abortive bacteriophage infection, resistance TDE_1367 2d8279ba94d85921235c050b42896d78 127 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 108 2.3E-12 T 12-10-2018 TDE_1367 2d8279ba94d85921235c050b42896d78 127 SUPERFAMILY SSF54593 1 125 1.19E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TDE_1367 2d8279ba94d85921235c050b42896d78 127 Gene3D G3DSA:3.10.180.10 1 127 2.1E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TDE_2096 91c50f16e2bd86c0dab83746d7e053c4 403 Gene3D G3DSA:3.40.50.12170 31 403 2.8E-141 T 12-10-2018 TDE_2096 91c50f16e2bd86c0dab83746d7e053c4 403 PIRSF PIRSF016719 1 403 2.9E-151 T 12-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TDE_2096 91c50f16e2bd86c0dab83746d7e053c4 403 Gene3D G3DSA:3.90.1150.140 240 388 2.8E-141 T 12-10-2018 TDE_2096 91c50f16e2bd86c0dab83746d7e053c4 403 Pfam PF07075 Protein of unknown function (DUF1343) 47 403 2.6E-138 T 12-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 TDE_0601 23881101118d99e73ee2608c590665c9 325 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 316 7.7E-28 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain TDE_0601 23881101118d99e73ee2608c590665c9 325 SUPERFAMILY SSF55048 139 206 1.83E-12 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding TDE_0601 23881101118d99e73ee2608c590665c9 325 Pfam PF00698 Acyl transferase domain 5 271 3.9E-28 T 12-10-2018 IPR014043 Acyl transferase TDE_0601 23881101118d99e73ee2608c590665c9 325 PIRSF PIRSF000446 1 325 1.4E-72 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 TDE_0601 23881101118d99e73ee2608c590665c9 325 Gene3D G3DSA:3.40.366.10 6 299 8.8E-79 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 TDE_0601 23881101118d99e73ee2608c590665c9 325 SUPERFAMILY SSF52151 5 302 1.15E-56 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TDE_0601 23881101118d99e73ee2608c590665c9 325 Gene3D G3DSA:3.30.70.250 123 207 8.8E-79 T 12-10-2018 TDE_0463 911ca7b227677f9e3c7e28e718be29d6 233 SUPERFAMILY SSF53167 2 232 2.75E-87 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TDE_0463 911ca7b227677f9e3c7e28e718be29d6 233 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 231 1.9E-90 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 TDE_0463 911ca7b227677f9e3c7e28e718be29d6 233 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 43.524 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 TDE_0463 911ca7b227677f9e3c7e28e718be29d6 233 Pfam PF01048 Phosphorylase superfamily 16 232 5.4E-36 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TDE_0463 911ca7b227677f9e3c7e28e718be29d6 233 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 TDE_0463 911ca7b227677f9e3c7e28e718be29d6 233 Gene3D G3DSA:3.40.50.1580 2 233 1.9E-70 T 12-10-2018 TDE_2637 31a96d261304f42372de5e5789973c8c 174 Pfam PF13563 2'-5' RNA ligase superfamily 2 160 9.6E-16 T 12-10-2018 TDE_2637 31a96d261304f42372de5e5789973c8c 174 Gene3D G3DSA:3.90.1140.10 1 171 3.8E-21 T 12-10-2018 TDE_2637 31a96d261304f42372de5e5789973c8c 174 SUPERFAMILY SSF55144 1 170 3.66E-19 T 12-10-2018 IPR009097 Cyclic phosphodiesterase TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 844 19.769 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Gene3D G3DSA:3.10.450.50 882 921 2.2E-8 T 12-10-2018 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 ProSitePatterns PS01312 SecA family signature. 507 522 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Gene3D G3DSA:3.90.1440.10 229 375 6.2E-165 T 12-10-2018 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Pfam PF07517 SecA DEAD-like domain 7 408 3.7E-127 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Gene3D G3DSA:3.40.50.300 23 422 6.2E-165 T 12-10-2018 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 PRINTS PR00906 SecA protein signature 117 127 2.5E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 PRINTS PR00906 SecA protein signature 63 87 2.5E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 PRINTS PR00906 SecA protein signature 101 115 2.5E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 PRINTS PR00906 SecA protein signature 420 433 2.5E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 PRINTS PR00906 SecA protein signature 170 190 2.5E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 PRINTS PR00906 SecA protein signature 346 368 2.5E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 PRINTS PR00906 SecA protein signature 383 400 2.5E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 SUPERFAMILY SSF81767 233 374 3.53E-37 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Pfam PF02810 SEC-C motif 902 920 5.2E-9 T 12-10-2018 IPR004027 SEC-C motif TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 SUPERFAMILY SSF52540 424 631 1.89E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Pfam PF01043 SecA preprotein cross-linking domain 239 365 4.5E-33 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Pfam PF07516 SecA Wing and Scaffold domain 630 842 1.1E-58 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 830 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 SMART SM00958 228 365 7.6E-65 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 SMART SM00957 6 409 1.8E-265 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Gene3D G3DSA:1.10.3060.10 634 845 2.0E-61 T 12-10-2018 TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 SUPERFAMILY SSF52540 9 422 1.52E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 SUPERFAMILY SSF81886 633 910 4.45E-71 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily TDE_1898 1d6cd128f42f46e50b1f900338b0c4a5 922 Gene3D G3DSA:3.40.50.300 424 633 6.0E-87 T 12-10-2018 TDE_2698 60700624167057b4ac127971b5a987e2 547 SUPERFAMILY SSF50998 35 278 9.16E-19 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TDE_2698 60700624167057b4ac127971b5a987e2 547 Pfam PF13360 PQQ-like domain 84 341 6.3E-6 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 590 619 1.8E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 513 540 1.8E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 542 571 1.8E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 436 465 1.8E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 Pfam PF02743 Cache domain 45 279 7.2E-28 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 Gene3D G3DSA:1.10.287.950 319 434 1.2E-10 T 12-10-2018 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 Gene3D G3DSA:1.10.287.950 440 656 7.4E-44 T 12-10-2018 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 SUPERFAMILY SSF103190 64 193 3.73E-6 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 Gene3D G3DSA:3.30.450.20 154 299 1.8E-23 T 12-10-2018 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 SMART SM00283 415 662 2.9E-62 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 Pfam PF00672 HAMP domain 320 364 2.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 SMART SM00304 318 372 7.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 SUPERFAMILY SSF58104 340 659 5.75E-50 T 12-10-2018 TDE_2783 b3a0e4230d4e5463bc0a42cae1497d5a 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 481 630 5.7E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2115 c1f10e21a5609e755a66fbdbc139e008 1526 SUPERFAMILY SSF50939 53 271 1.37E-13 T 12-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 TDE_2115 c1f10e21a5609e755a66fbdbc139e008 1526 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 1215 1363 1.8E-22 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_2115 c1f10e21a5609e755a66fbdbc139e008 1526 SMART SM00304 1097 1154 4.8E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_2115 c1f10e21a5609e755a66fbdbc139e008 1526 SMART SM00331 1188 1411 2.7E-42 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_2115 c1f10e21a5609e755a66fbdbc139e008 1526 Gene3D G3DSA:1.20.1480.50 1058 1154 2.6E-5 T 12-10-2018 TDE_2115 c1f10e21a5609e755a66fbdbc139e008 1526 Gene3D G3DSA:2.120.10.10 57 296 8.8E-8 T 12-10-2018 TDE_2115 c1f10e21a5609e755a66fbdbc139e008 1526 SUPERFAMILY SSF81606 1199 1362 6.02E-5 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_2115 c1f10e21a5609e755a66fbdbc139e008 1526 Gene3D G3DSA:3.60.40.10 1155 1398 6.9E-39 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_1108 0d1ed1ec63d0dfb2f2df619c5a2f98aa 148 SUPERFAMILY SSF75420 11 85 7.19E-14 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily TDE_1108 0d1ed1ec63d0dfb2f2df619c5a2f98aa 148 Gene3D G3DSA:3.30.300.70 11 82 4.8E-9 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily TDE_1108 0d1ed1ec63d0dfb2f2df619c5a2f98aa 148 Pfam PF02576 RimP N-terminal domain 15 84 8.3E-14 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal TDE_1108 0d1ed1ec63d0dfb2f2df619c5a2f98aa 148 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 9 148 13.331 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 TDE_1108 0d1ed1ec63d0dfb2f2df619c5a2f98aa 148 Pfam PF17384 RimP C-terminal SH3 domain 89 145 5.6E-6 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal TDE_1108 0d1ed1ec63d0dfb2f2df619c5a2f98aa 148 SUPERFAMILY SSF74942 87 146 3.01E-5 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily TDE_1744 86c6d756e8d23ce65c08a3233497f7a5 195 Pfam PF02417 Chromate transporter 12 176 2.3E-44 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TDE_0506 003a6d819f23df7b01832014c80634de 90 Pfam PF04221 RelB antitoxin 5 70 1.7E-14 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_0506 003a6d819f23df7b01832014c80634de 90 Gene3D G3DSA:1.10.1220.10 1 50 2.0E-8 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TDE_0506 003a6d819f23df7b01832014c80634de 90 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 88 3.4E-27 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_0506 003a6d819f23df7b01832014c80634de 90 PIRSF PIRSF003108 1 90 4.5E-17 T 12-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 TDE_0375 627383461a5975b760c42acba7098c8f 316 Gene3D G3DSA:3.40.50.300 1 237 7.2E-75 T 12-10-2018 TDE_0375 627383461a5975b760c42acba7098c8f 316 SMART SM00382 27 210 1.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0375 627383461a5975b760c42acba7098c8f 316 Pfam PF00005 ABC transporter 18 160 4.3E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0375 627383461a5975b760c42acba7098c8f 316 SUPERFAMILY SSF52540 3 239 9.35E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0375 627383461a5975b760c42acba7098c8f 316 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0375 627383461a5975b760c42acba7098c8f 316 SUPERFAMILY SSF50331 239 312 2.38E-7 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TDE_2109 8d526aa924b727c373913d7c876eda10 570 Pfam PF00270 DEAD/DEAH box helicase 27 191 4.9E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TDE_2109 8d526aa924b727c373913d7c876eda10 570 Gene3D G3DSA:3.40.50.300 2 208 7.0E-72 T 12-10-2018 TDE_2109 8d526aa924b727c373913d7c876eda10 570 Pfam PF00271 Helicase conserved C-terminal domain 228 337 1.7E-28 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_2109 8d526aa924b727c373913d7c876eda10 570 Gene3D G3DSA:3.30.70.330 459 522 7.5E-6 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TDE_2109 8d526aa924b727c373913d7c876eda10 570 Gene3D G3DSA:3.40.50.300 211 432 4.0E-50 T 12-10-2018 TDE_2109 8d526aa924b727c373913d7c876eda10 570 SMART SM00487 22 220 7.8E-58 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_2109 8d526aa924b727c373913d7c876eda10 570 Pfam PF03880 DbpA RNA binding domain 460 521 4.5E-12 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain TDE_2109 8d526aa924b727c373913d7c876eda10 570 SUPERFAMILY SSF52540 72 358 1.49E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2109 8d526aa924b727c373913d7c876eda10 570 SMART SM00490 256 337 1.3E-33 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_2109 8d526aa924b727c373913d7c876eda10 570 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TDE_2007 f47d30f6e426d4df4cdb67bba65fbfc4 580 SMART SM00382 363 549 1.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2007 f47d30f6e426d4df4cdb67bba65fbfc4 580 SUPERFAMILY SSF90123 3 311 9.03E-55 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2007 f47d30f6e426d4df4cdb67bba65fbfc4 580 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2007 f47d30f6e426d4df4cdb67bba65fbfc4 580 Gene3D G3DSA:1.20.1560.10 1 313 9.6E-46 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2007 f47d30f6e426d4df4cdb67bba65fbfc4 580 SUPERFAMILY SSF52540 319 572 6.5E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2007 f47d30f6e426d4df4cdb67bba65fbfc4 580 Pfam PF00664 ABC transporter transmembrane region 17 276 1.2E-27 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2007 f47d30f6e426d4df4cdb67bba65fbfc4 580 Gene3D G3DSA:3.40.50.300 322 579 4.9E-84 T 12-10-2018 TDE_2007 f47d30f6e426d4df4cdb67bba65fbfc4 580 Pfam PF00005 ABC transporter 355 503 9.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0465 b7026cd78979f43d4a893f75fd54e325 125 Pfam PF01850 PIN domain 2 120 4.4E-14 T 12-10-2018 IPR002716 PIN domain TDE_0465 b7026cd78979f43d4a893f75fd54e325 125 Gene3D G3DSA:3.40.50.1010 1 123 3.3E-11 T 12-10-2018 TDE_0465 b7026cd78979f43d4a893f75fd54e325 125 SUPERFAMILY SSF88723 1 125 8.41E-20 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 SUPERFAMILY SSF48452 138 188 1.67E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 758 789 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 Gene3D G3DSA:3.10.50.30 819 897 3.0E-20 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 SUPERFAMILY SSF54534 823 895 3.79E-17 T 12-10-2018 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 Gene3D G3DSA:1.10.287.180 743 816 1.8E-15 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 Pfam PF03449 Transcription elongation factor, N-terminal 746 815 3.1E-16 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 Hamap MF_00105 Transcription elongation factor GreA [greA]. 743 896 25.511 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 Gene3D G3DSA:1.25.40.10 88 281 5.8E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 SUPERFAMILY SSF46557 746 819 7.32E-16 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 747 896 1.3E-46 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 TDE_2695 0c43986a4e5cf4aac03e19ae2a71143f 901 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 822 896 6.8E-25 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TDE_0411 9e3720ca608fb3bc66bb113e8495a135 694 Gene3D G3DSA:3.30.70.1230 430 628 2.0E-61 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0411 9e3720ca608fb3bc66bb113e8495a135 694 SMART SM00044 397 603 1.1E-12 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0411 9e3720ca608fb3bc66bb113e8495a135 694 SUPERFAMILY SSF55073 431 624 1.05E-51 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0411 9e3720ca608fb3bc66bb113e8495a135 694 SMART SM01080 27 334 2.0E-61 T 12-10-2018 IPR007890 CHASE2 TDE_0411 9e3720ca608fb3bc66bb113e8495a135 694 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 436 614 5.2E-27 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0411 9e3720ca608fb3bc66bb113e8495a135 694 Pfam PF05226 CHASE2 domain 17 331 5.2E-45 T 12-10-2018 IPR007890 CHASE2 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Gene3D G3DSA:3.40.920.10 415 625 4.6E-93 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 SUPERFAMILY SSF52922 260 413 2.43E-46 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 358 2.0E-13 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 SUPERFAMILY SSF53323 415 658 2.35E-87 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 PIRSF PIRSF000159 1 1201 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 SUPERFAMILY SSF52518 3 258 4.06E-73 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Gene3D G3DSA:3.30.70.20 669 783 1.1E-44 T 12-10-2018 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Pfam PF10371 Domain of unknown function 627 678 5.4E-20 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 SUPERFAMILY SSF52518 787 1201 1.71E-127 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 987 1099 5.5E-10 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 SUPERFAMILY SSF54862 671 766 1.16E-16 T 12-10-2018 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 248 7.8E-75 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 SMART SM00890 622 679 1.4E-24 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 941 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 4.4E-32 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Gene3D G3DSA:3.40.50.970 2 258 3.2E-106 T 12-10-2018 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Pfam PF13484 4Fe-4S double cluster binding domain 688 757 6.4E-9 T 12-10-2018 TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_2198 f71eea640fbfa3b839f4a64bc275d1f5 1201 Gene3D G3DSA:3.40.50.920 259 413 5.2E-57 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TDE_2509 735ccc83fcbb6b7740bed380825266f7 294 SUPERFAMILY SSF46689 238 287 1.39E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_2509 735ccc83fcbb6b7740bed380825266f7 294 SMART SM00342 202 285 6.6E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TDE_2509 735ccc83fcbb6b7740bed380825266f7 294 Pfam PF12833 Helix-turn-helix domain 214 286 4.0E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TDE_2509 735ccc83fcbb6b7740bed380825266f7 294 SUPERFAMILY SSF46689 185 236 7.62E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_2509 735ccc83fcbb6b7740bed380825266f7 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TDE_2509 735ccc83fcbb6b7740bed380825266f7 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TDE_2509 735ccc83fcbb6b7740bed380825266f7 294 Gene3D G3DSA:1.10.10.60 184 289 5.6E-24 T 12-10-2018 TDE_2509 735ccc83fcbb6b7740bed380825266f7 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 281 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TDE_1417 8aaa29cb8cb64c621806e38d1ab95e4f 411 Gene3D G3DSA:3.40.50.300 50 258 7.8E-43 T 12-10-2018 TDE_1417 8aaa29cb8cb64c621806e38d1ab95e4f 411 SMART SM00382 70 245 7.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1417 8aaa29cb8cb64c621806e38d1ab95e4f 411 SUPERFAMILY SSF52540 56 249 1.41E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1417 8aaa29cb8cb64c621806e38d1ab95e4f 411 Pfam PF00005 ABC transporter 61 192 5.8E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1033 c6f20cdf1bd9d9e8cbcae0bd5c815485 448 Gene3D G3DSA:3.30.460.10 3 143 4.3E-49 T 12-10-2018 TDE_1033 c6f20cdf1bd9d9e8cbcae0bd5c815485 448 Gene3D G3DSA:1.10.3090.10 144 436 1.4E-59 T 12-10-2018 TDE_1033 c6f20cdf1bd9d9e8cbcae0bd5c815485 448 SUPERFAMILY SSF81301 6 141 8.07E-42 T 12-10-2018 TDE_1033 c6f20cdf1bd9d9e8cbcae0bd5c815485 448 Pfam PF01743 Poly A polymerase head domain 23 143 4.8E-39 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TDE_1033 c6f20cdf1bd9d9e8cbcae0bd5c815485 448 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 296 439 6.7E-16 T 12-10-2018 IPR032810 CCA-adding enzyme, C-terminal TDE_1033 c6f20cdf1bd9d9e8cbcae0bd5c815485 448 TIGRFAM TIGR00277 HDIG: HDIG domain 242 311 2.7E-8 T 12-10-2018 IPR006675 HDIG domain TDE_1033 c6f20cdf1bd9d9e8cbcae0bd5c815485 448 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 231 2.2E-19 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TDE_1033 c6f20cdf1bd9d9e8cbcae0bd5c815485 448 SUPERFAMILY SSF81891 142 441 6.8E-59 T 12-10-2018 TDE_0200 d26691bc95cf267135c9a669be85c7c9 223 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 202 4.1E-23 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TDE_0200 d26691bc95cf267135c9a669be85c7c9 223 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 3 221 5.8E-61 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TDE_0200 d26691bc95cf267135c9a669be85c7c9 223 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 81 92 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 TDE_0200 d26691bc95cf267135c9a669be85c7c9 223 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 222 34.242 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TDE_0200 d26691bc95cf267135c9a669be85c7c9 223 SUPERFAMILY SSF53790 2 220 1.31E-67 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TDE_0200 d26691bc95cf267135c9a669be85c7c9 223 Gene3D G3DSA:3.40.1010.10 1 110 2.8E-40 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TDE_0200 d26691bc95cf267135c9a669be85c7c9 223 PIRSF PIRSF005917 1 223 2.3E-86 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TDE_0200 d26691bc95cf267135c9a669be85c7c9 223 Gene3D G3DSA:3.30.950.10 111 223 8.7E-29 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TDE_0493 ef879d5da31633a3c6105f26800aaca9 253 Gene3D G3DSA:3.40.50.150 11 197 3.3E-13 T 12-10-2018 TDE_0493 ef879d5da31633a3c6105f26800aaca9 253 SUPERFAMILY SSF53335 10 194 3.58E-18 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0493 ef879d5da31633a3c6105f26800aaca9 253 Pfam PF08241 Methyltransferase domain 56 142 5.8E-6 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TDE_1299 de0c1bf77b43967c832c3aa63bf22c7e 398 SUPERFAMILY SSF109604 178 391 5.46E-30 T 12-10-2018 TDE_1299 de0c1bf77b43967c832c3aa63bf22c7e 398 SUPERFAMILY SSF109604 40 153 1.98E-5 T 12-10-2018 TDE_1299 de0c1bf77b43967c832c3aa63bf22c7e 398 Pfam PF13023 HD domain 196 375 2.9E-31 T 12-10-2018 IPR006674 HD domain TDE_1299 de0c1bf77b43967c832c3aa63bf22c7e 398 Gene3D G3DSA:1.10.3210.10 190 389 2.5E-30 T 12-10-2018 TDE_1299 de0c1bf77b43967c832c3aa63bf22c7e 398 Gene3D G3DSA:1.10.3210.10 9 189 7.9E-20 T 12-10-2018 TDE_1203 d0749fa50a8c41068e202034526c1259 414 Gene3D G3DSA:3.30.1490.110 83 170 9.9E-105 T 12-10-2018 TDE_1203 d0749fa50a8c41068e202034526c1259 414 PIRSF PIRSF003101 1 414 1.5E-127 T 12-10-2018 IPR020823 Cell division protein FtsA TDE_1203 d0749fa50a8c41068e202034526c1259 414 Pfam PF14450 Cell division protein FtsA 208 376 1.5E-19 T 12-10-2018 TDE_1203 d0749fa50a8c41068e202034526c1259 414 Hamap MF_02033 Cell division protein FtsA [ftsA]. 2 414 27.257 T 12-10-2018 IPR020823 Cell division protein FtsA TDE_1203 d0749fa50a8c41068e202034526c1259 414 SMART SM00842 6 197 2.1E-78 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TDE_1203 d0749fa50a8c41068e202034526c1259 414 Pfam PF14450 Cell division protein FtsA 7 181 8.1E-10 T 12-10-2018 TDE_1203 d0749fa50a8c41068e202034526c1259 414 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 379 7.8E-128 T 12-10-2018 IPR020823 Cell division protein FtsA TDE_1203 d0749fa50a8c41068e202034526c1259 414 Gene3D G3DSA:3.90.640.10 236 301 9.9E-105 T 12-10-2018 TDE_1203 d0749fa50a8c41068e202034526c1259 414 Gene3D G3DSA:3.30.420.40 198 354 9.9E-105 T 12-10-2018 TDE_1203 d0749fa50a8c41068e202034526c1259 414 SUPERFAMILY SSF53067 199 379 7.89E-38 T 12-10-2018 TDE_1203 d0749fa50a8c41068e202034526c1259 414 Gene3D G3DSA:3.30.420.40 9 374 9.9E-105 T 12-10-2018 TDE_1203 d0749fa50a8c41068e202034526c1259 414 SUPERFAMILY SSF53067 4 212 3.02E-50 T 12-10-2018 TDE_1203 d0749fa50a8c41068e202034526c1259 414 Pfam PF02491 SHS2 domain inserted in FTSA 81 163 6.5E-29 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TDE_0625 7799700008da40b7a66524de26e39ddd 256 Pfam PF00005 ABC transporter 18 165 3.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0625 7799700008da40b7a66524de26e39ddd 256 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0625 7799700008da40b7a66524de26e39ddd 256 SMART SM00382 26 215 7.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0625 7799700008da40b7a66524de26e39ddd 256 SUPERFAMILY SSF52540 2 234 1.31E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0625 7799700008da40b7a66524de26e39ddd 256 Gene3D G3DSA:3.40.50.300 1 247 4.9E-67 T 12-10-2018 TDE_1431 ea87c2a93fe11e2f474b9b7d8124ca85 498 Pfam PF13439 Glycosyltransferase Family 4 41 212 2.4E-9 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TDE_1431 ea87c2a93fe11e2f474b9b7d8124ca85 498 Pfam PF00534 Glycosyl transferases group 1 231 382 6.5E-32 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 TDE_1431 ea87c2a93fe11e2f474b9b7d8124ca85 498 Gene3D G3DSA:3.40.50.2000 41 398 2.6E-56 T 12-10-2018 TDE_1431 ea87c2a93fe11e2f474b9b7d8124ca85 498 SUPERFAMILY SSF53756 30 404 1.06E-63 T 12-10-2018 TDE_1431 ea87c2a93fe11e2f474b9b7d8124ca85 498 Gene3D G3DSA:3.40.50.2000 209 389 2.6E-56 T 12-10-2018 TDE_0544 44be1a30e4519329a3faa9268c6c036b 310 Gene3D G3DSA:3.90.1580.10 16 309 5.7E-92 T 12-10-2018 TDE_0544 44be1a30e4519329a3faa9268c6c036b 310 SUPERFAMILY SSF56436 40 308 4.24E-49 T 12-10-2018 IPR016187 C-type lectin fold TDE_0544 44be1a30e4519329a3faa9268c6c036b 310 Pfam PF03781 Sulfatase-modifying factor enzyme 1 45 307 5.1E-40 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 Gene3D G3DSA:2.40.50.100 64 99 5.3E-6 T 12-10-2018 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 Pfam PF13437 HlyD family secretion protein 240 342 6.8E-14 T 12-10-2018 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 Gene3D G3DSA:2.40.30.170 278 367 9.0E-15 T 12-10-2018 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 Gene3D G3DSA:1.10.287.470 100 140 5.3E-6 T 12-10-2018 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 Gene3D G3DSA:1.10.287.470 180 239 9.0E-15 T 12-10-2018 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 35 58 1.0E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 354 369 1.0E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 333 1.0E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 286 310 1.0E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 SUPERFAMILY SSF111369 58 139 4.58E-6 T 12-10-2018 TDE_0426 4552bddf7f2cebc9836c53d550325bee 383 Gene3D G3DSA:2.40.50.100 240 277 9.0E-15 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 5 25 5.4E-35 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 337 357 5.4E-35 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 521 546 5.4E-35 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 402 424 5.4E-35 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 235 257 5.4E-35 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 502 520 5.4E-35 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 439 454 5.4E-35 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 SMART SM00490 459 546 3.6E-10 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 Pfam PF04851 Type III restriction enzyme, res subunit 218 372 1.2E-11 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 Gene3D G3DSA:3.40.50.300 399 590 5.3E-50 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 SMART SM00487 217 401 5.0E-17 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 SUPERFAMILY SSF52540 267 565 1.87E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 398 586 6.6E-47 T 12-10-2018 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 Gene3D G3DSA:3.40.50.300 210 398 2.7E-32 T 12-10-2018 TDE_2721 b87ecba13c14e915755ed7a5e9a9d605 590 Pfam PF13625 Helicase conserved C-terminal domain 7 100 2.9E-32 T 12-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 TDE_1548 de399889eca29c3f2148c59483613e1b 95 PIRSF PIRSF004555 1 95 1.2E-28 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TDE_1548 de399889eca29c3f2148c59483613e1b 95 SUPERFAMILY SSF82607 1 88 6.93E-23 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily TDE_1548 de399889eca29c3f2148c59483613e1b 95 Gene3D G3DSA:3.30.1310.10 1 95 8.5E-25 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily TDE_1548 de399889eca29c3f2148c59483613e1b 95 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 83 1.5E-20 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TDE_1548 de399889eca29c3f2148c59483613e1b 95 Pfam PF02575 YbaB/EbfC DNA-binding family 1 88 6.6E-25 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TDE_1548 de399889eca29c3f2148c59483613e1b 95 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 89 15.943 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TDE_0182 636a7db324bcfc1e699400addadd62f7 549 Gene3D G3DSA:2.40.50.940 350 446 3.3E-9 T 12-10-2018 TDE_0182 636a7db324bcfc1e699400addadd62f7 549 SMART SM00382 28 343 1.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0182 636a7db324bcfc1e699400addadd62f7 549 SUPERFAMILY SSF50331 456 542 6.8E-10 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TDE_0182 636a7db324bcfc1e699400addadd62f7 549 ProSitePatterns PS00211 ABC transporters family signature. 266 280 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0182 636a7db324bcfc1e699400addadd62f7 549 Gene3D G3DSA:3.40.50.300 1 152 2.3E-25 T 12-10-2018 TDE_0182 636a7db324bcfc1e699400addadd62f7 549 Gene3D G3DSA:3.40.50.300 153 349 2.8E-25 T 12-10-2018 TDE_0182 636a7db324bcfc1e699400addadd62f7 549 SUPERFAMILY SSF52540 2 366 8.44E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0182 636a7db324bcfc1e699400addadd62f7 549 Pfam PF00005 ABC transporter 20 293 7.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2049 31f03d7e9c4b81fd69ff4c53a2ec61f1 530 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 439 1.9E-55 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain TDE_2049 31f03d7e9c4b81fd69ff4c53a2ec61f1 530 Gene3D G3DSA:3.10.105.10 285 488 2.6E-92 T 12-10-2018 TDE_2049 31f03d7e9c4b81fd69ff4c53a2ec61f1 530 Gene3D G3DSA:3.90.76.10 57 180 2.6E-92 T 12-10-2018 TDE_2049 31f03d7e9c4b81fd69ff4c53a2ec61f1 530 Gene3D G3DSA:3.40.190.10 27 493 2.6E-92 T 12-10-2018 TDE_2049 31f03d7e9c4b81fd69ff4c53a2ec61f1 530 SUPERFAMILY SSF53850 24 514 2.31E-84 T 12-10-2018 TDE_2049 31f03d7e9c4b81fd69ff4c53a2ec61f1 530 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 95 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site TDE_2049 31f03d7e9c4b81fd69ff4c53a2ec61f1 530 PIRSF PIRSF002741 19 511 8.9E-58 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TDE_2190 83854f1403ff67e25a3fc279f7be0281 710 SUPERFAMILY SSF64182 357 580 4.01E-43 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily TDE_2190 83854f1403ff67e25a3fc279f7be0281 710 Gene3D G3DSA:3.10.310.30 465 582 7.9E-22 T 12-10-2018 TDE_2190 83854f1403ff67e25a3fc279f7be0281 710 Pfam PF01368 DHH family 77 177 1.9E-10 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TDE_2190 83854f1403ff67e25a3fc279f7be0281 710 Gene3D G3DSA:3.90.1640.30 53 249 1.1E-51 T 12-10-2018 TDE_2190 83854f1403ff67e25a3fc279f7be0281 710 Gene3D G3DSA:3.90.1640.30 322 457 2.6E-26 T 12-10-2018 TDE_2190 83854f1403ff67e25a3fc279f7be0281 710 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 703 1.9E-176 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 TDE_2190 83854f1403ff67e25a3fc279f7be0281 710 Pfam PF02272 DHHA1 domain 455 577 2.0E-14 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TDE_2190 83854f1403ff67e25a3fc279f7be0281 710 SUPERFAMILY SSF64182 52 207 4.97E-47 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 SUPERFAMILY SSF54826 4 137 3.7E-57 T 12-10-2018 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 Hamap MF_00318 Enolase [eno]. 2 415 44.792 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 SMART SM01192 139 429 1.8E-213 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 427 1.3E-132 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 Gene3D G3DSA:3.20.20.120 128 433 2.7E-138 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 PIRSF PIRSF001400 1 429 1.0E-191 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 SUPERFAMILY SSF51604 139 430 3.26E-127 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 ProSitePatterns PS00164 Enolase signature. 338 351 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 Pfam PF03952 Enolase, N-terminal domain 4 134 2.4E-60 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 SMART SM01193 4 134 1.3E-93 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 Gene3D G3DSA:3.30.390.10 1 127 5.6E-55 T 12-10-2018 IPR029017 Enolase-like, N-terminal TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 5 429 4.6E-215 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 PRINTS PR00148 Enolase signature 161 174 2.4E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 PRINTS PR00148 Enolase signature 338 352 2.4E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 PRINTS PR00148 Enolase signature 37 51 2.4E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 PRINTS PR00148 Enolase signature 367 384 2.4E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 PRINTS PR00148 Enolase signature 315 326 2.4E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_0949 1721e614b28f75fb2fc34e37bd7508b4 433 PRINTS PR00148 Enolase signature 107 123 2.4E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 Gene3D G3DSA:3.40.50.300 1 221 1.7E-73 T 12-10-2018 TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 SMART SM00490 457 543 2.8E-19 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 SMART SM00487 8 422 7.4E-24 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 Gene3D G3DSA:3.40.50.300 412 593 2.4E-49 T 12-10-2018 TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 SUPERFAMILY SSF52540 36 583 7.87E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 Pfam PF12344 Ultra-violet resistance protein B 549 590 5.6E-23 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 660 42.625 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 Pfam PF02151 UvrB/uvrC motif 625 659 6.6E-6 T 12-10-2018 IPR001943 UVR domain GO:0005515 TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 Pfam PF00271 Helicase conserved C-terminal domain 429 542 2.3E-17 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 658 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 Gene3D G3DSA:3.40.50.300 253 411 1.0E-49 T 12-10-2018 TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 SUPERFAMILY SSF46600 614 659 1.96E-9 T 12-10-2018 IPR036876 UVR domain superfamily TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 Pfam PF04851 Type III restriction enzyme, res subunit 14 86 7.8E-10 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 SUPERFAMILY SSF52540 1 412 1.7E-132 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1369 0d73aac50a30a3bba6676608c346efe8 662 Gene3D G3DSA:4.10.860.10 613 661 1.3E-7 T 12-10-2018 TDE_0691 6785fda6d249755779e8f9a14a592027 528 Pfam PF00005 ABC transporter 343 482 1.5E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0691 6785fda6d249755779e8f9a14a592027 528 SUPERFAMILY SSF52540 324 528 8.38E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0691 6785fda6d249755779e8f9a14a592027 528 SMART SM00382 348 528 1.1E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0691 6785fda6d249755779e8f9a14a592027 528 Gene3D G3DSA:1.20.1560.10 1 298 1.4E-39 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0691 6785fda6d249755779e8f9a14a592027 528 SUPERFAMILY SSF90123 4 291 1.83E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0691 6785fda6d249755779e8f9a14a592027 528 Pfam PF00664 ABC transporter transmembrane region 14 281 6.5E-29 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0691 6785fda6d249755779e8f9a14a592027 528 Gene3D G3DSA:3.40.50.300 310 528 1.7E-36 T 12-10-2018 TDE_0691 6785fda6d249755779e8f9a14a592027 528 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0582 13a89de0ecad568605639a54d6b5f33e 322 PIRSF PIRSF002849 1 316 2.4E-116 T 12-10-2018 TDE_0582 13a89de0ecad568605639a54d6b5f33e 322 SUPERFAMILY SSF52540 7 286 5.16E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0582 13a89de0ecad568605639a54d6b5f33e 322 Gene3D G3DSA:3.40.50.300 1 199 7.4E-45 T 12-10-2018 TDE_0582 13a89de0ecad568605639a54d6b5f33e 322 SMART SM00382 34 261 0.0025 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0582 13a89de0ecad568605639a54d6b5f33e 322 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 173 2.1E-56 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 TDE_0582 13a89de0ecad568605639a54d6b5f33e 322 Gene3D G3DSA:1.10.8.300 204 312 1.4E-20 T 12-10-2018 TDE_0120 cc206336b4507742e4bed7f8f073b927 399 Pfam PF01996 F420-0:Gamma-glutamyl ligase 12 392 2.9E-77 T 12-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 TDE_0120 cc206336b4507742e4bed7f8f073b927 399 Gene3D G3DSA:3.30.1330.100 11 84 9.6E-8 T 12-10-2018 TDE_0120 cc206336b4507742e4bed7f8f073b927 399 SUPERFAMILY SSF144010 7 398 4.05E-45 T 12-10-2018 TDE_2355 2f486792669e9dc185e52eb33c4d334b 75 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 70 18.419 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TDE_2355 2f486792669e9dc185e52eb33c4d334b 75 SUPERFAMILY SSF117130 1 55 3.53E-20 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TDE_2355 2f486792669e9dc185e52eb33c4d334b 75 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 6.0E-9 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TDE_2355 2f486792669e9dc185e52eb33c4d334b 75 Pfam PF02599 Global regulator protein family 1 52 7.1E-26 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TDE_2355 2f486792669e9dc185e52eb33c4d334b 75 Gene3D G3DSA:3.30.70.1680 1 62 1.5E-27 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TDE_2355 2f486792669e9dc185e52eb33c4d334b 75 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 64 1.5E-28 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TDE_1731 ef2866621627cdb338837ffb677328b2 467 Pfam PF07690 Major Facilitator Superfamily 52 329 2.8E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TDE_1731 ef2866621627cdb338837ffb677328b2 467 SUPERFAMILY SSF103473 16 457 6.54E-39 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_1731 ef2866621627cdb338837ffb677328b2 467 Gene3D G3DSA:1.20.1250.20 14 222 6.8E-20 T 12-10-2018 TDE_1731 ef2866621627cdb338837ffb677328b2 467 Gene3D G3DSA:1.20.1250.20 236 458 7.8E-9 T 12-10-2018 TDE_1213 b842198e749bb0503bbd56bf643e2310 151 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 105 148 8.0E-14 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TDE_1213 b842198e749bb0503bbd56bf643e2310 151 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TDE_1213 b842198e749bb0503bbd56bf643e2310 151 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 151 4.3E-46 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 TDE_1213 b842198e749bb0503bbd56bf643e2310 151 Pfam PF00460 Flagella basal body rod protein 7 32 2.3E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TDE_2157 89df8e1556f9e64d11d8ee22f3998fa1 237 Pfam PF02361 Cobalt transport protein 1 191 6.9E-14 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_0227 a9aec0f5a7c61198453a5ca61cf7abb3 877 Gene3D G3DSA:3.40.50.150 10 191 8.5E-6 T 12-10-2018 TDE_0227 a9aec0f5a7c61198453a5ca61cf7abb3 877 SUPERFAMILY SSF53335 535 775 3.22E-6 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0227 a9aec0f5a7c61198453a5ca61cf7abb3 877 SUPERFAMILY SSF53335 316 602 6.16E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0227 a9aec0f5a7c61198453a5ca61cf7abb3 877 SUPERFAMILY SSF53335 54 169 4.76E-9 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0227 a9aec0f5a7c61198453a5ca61cf7abb3 877 Pfam PF01555 DNA methylase 324 593 2.8E-9 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 TDE_2367 f8629c36b58a7923184eac8a733ddb17 214 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 72 6.9E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TDE_2367 f8629c36b58a7923184eac8a733ddb17 214 SUPERFAMILY SSF46785 9 84 1.23E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_2367 f8629c36b58a7923184eac8a733ddb17 214 Gene3D G3DSA:1.20.120.530 79 214 2.5E-9 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TDE_2367 f8629c36b58a7923184eac8a733ddb17 214 SUPERFAMILY SSF48008 81 208 2.88E-10 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TDE_2367 f8629c36b58a7923184eac8a733ddb17 214 Gene3D G3DSA:1.10.10.10 4 75 2.9E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_2367 f8629c36b58a7923184eac8a733ddb17 214 Pfam PF07729 FCD domain 85 205 4.6E-7 T 12-10-2018 IPR011711 GntR, C-terminal TDE_1896 acd6164be24767e4b127fec56d42187e 533 SUPERFAMILY SSF52335 2 191 5.63E-63 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TDE_1896 acd6164be24767e4b127fec56d42187e 533 Pfam PF02142 MGS-like domain 14 126 2.1E-22 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain TDE_1896 acd6164be24767e4b127fec56d42187e 533 Gene3D G3DSA:3.40.140.20 389 533 1.7E-49 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_1896 acd6164be24767e4b127fec56d42187e 533 SMART SM00798 132 468 4.5E-157 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_1896 acd6164be24767e4b127fec56d42187e 533 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 533 1.3E-167 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_1896 acd6164be24767e4b127fec56d42187e 533 Pfam PF01808 AICARFT/IMPCHase bienzyme 132 467 3.8E-100 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_1896 acd6164be24767e4b127fec56d42187e 533 PIRSF PIRSF000414 1 533 4.4E-197 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_1896 acd6164be24767e4b127fec56d42187e 533 SUPERFAMILY SSF53927 211 533 7.32E-105 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TDE_1896 acd6164be24767e4b127fec56d42187e 533 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 533 37.372 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_1896 acd6164be24767e4b127fec56d42187e 533 SMART SM00851 13 127 1.8E-45 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain TDE_1896 acd6164be24767e4b127fec56d42187e 533 Gene3D G3DSA:3.40.140.20 207 373 3.9E-52 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_1896 acd6164be24767e4b127fec56d42187e 533 Gene3D G3DSA:3.40.50.1380 1 190 3.4E-79 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TDE_1400 e3ea4098691d139bd6dfa6b3482db186 650 Pfam PF02540 NAD synthase 337 480 5.3E-23 T 12-10-2018 IPR022310 NAD/GMP synthase TDE_1400 e3ea4098691d139bd6dfa6b3482db186 650 Gene3D G3DSA:3.60.110.10 8 301 1.2E-31 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_1400 e3ea4098691d139bd6dfa6b3482db186 650 TIGRFAM TIGR00552 nadE: NAD+ synthetase 341 479 1.2E-18 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 TDE_1400 e3ea4098691d139bd6dfa6b3482db186 650 SUPERFAMILY SSF56317 16 274 1.05E-21 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_1400 e3ea4098691d139bd6dfa6b3482db186 650 Gene3D G3DSA:3.40.50.620 304 530 5.9E-59 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1400 e3ea4098691d139bd6dfa6b3482db186 650 Gene3D G3DSA:1.10.10.1140 545 648 9.7E-41 T 12-10-2018 TDE_1400 e3ea4098691d139bd6dfa6b3482db186 650 SUPERFAMILY SSF52402 326 618 1.94E-59 T 12-10-2018 TDE_1400 e3ea4098691d139bd6dfa6b3482db186 650 PIRSF PIRSF006630 172 640 1.4E-70 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TDE_1400 e3ea4098691d139bd6dfa6b3482db186 650 PIRSF PIRSF006630 15 129 4.3E-15 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TDE_0345 ba4d35b35938422d89506b7bbce51e58 410 SUPERFAMILY SSF58104 45 147 1.52E-9 T 12-10-2018 TDE_0345 ba4d35b35938422d89506b7bbce51e58 410 Gene3D G3DSA:1.10.287.950 101 409 1.0E-49 T 12-10-2018 TDE_0345 ba4d35b35938422d89506b7bbce51e58 410 Pfam PF00672 HAMP domain 24 72 1.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0345 ba4d35b35938422d89506b7bbce51e58 410 Gene3D G3DSA:1.20.1480.50 1 82 2.9E-7 T 12-10-2018 TDE_0345 ba4d35b35938422d89506b7bbce51e58 410 SUPERFAMILY SSF58104 132 365 6.67E-47 T 12-10-2018 TDE_0345 ba4d35b35938422d89506b7bbce51e58 410 SMART SM00283 120 367 2.8E-71 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0345 ba4d35b35938422d89506b7bbce51e58 410 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 186 335 8.8E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0345 ba4d35b35938422d89506b7bbce51e58 410 SMART SM00304 23 77 1.8E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0453 06b20e3003a29d76c9b0d817c8e65a7e 73 Pfam PF08972 Domain of unknown function (DUF1902) 3 71 7.8E-33 T 12-10-2018 IPR015066 Domain of unknown function DUF1902 TDE_0453 06b20e3003a29d76c9b0d817c8e65a7e 73 SUPERFAMILY SSF143100 1 65 1.19E-14 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like TDE_0453 06b20e3003a29d76c9b0d817c8e65a7e 73 Gene3D G3DSA:3.30.2390.10 1 71 9.6E-21 T 12-10-2018 TDE_1603 14075e759f9ee2748cf563f374f93770 481 Gene3D G3DSA:3.40.50.300 260 477 5.3E-47 T 12-10-2018 TDE_1603 14075e759f9ee2748cf563f374f93770 481 SUPERFAMILY SSF52540 7 222 5.45E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1603 14075e759f9ee2748cf563f374f93770 481 ProSitePatterns PS00211 ABC transporters family signature. 384 398 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1603 14075e759f9ee2748cf563f374f93770 481 Gene3D G3DSA:3.40.50.300 4 244 4.6E-53 T 12-10-2018 TDE_1603 14075e759f9ee2748cf563f374f93770 481 SMART SM00382 30 220 1.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1603 14075e759f9ee2748cf563f374f93770 481 SMART SM00382 285 458 5.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1603 14075e759f9ee2748cf563f374f93770 481 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1603 14075e759f9ee2748cf563f374f93770 481 Pfam PF00005 ABC transporter 21 171 1.8E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1603 14075e759f9ee2748cf563f374f93770 481 SUPERFAMILY SSF52540 253 458 1.65E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1603 14075e759f9ee2748cf563f374f93770 481 Pfam PF00005 ABC transporter 277 412 1.2E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1526 8de0caf4e23ffec32ba66aeb11a1ef05 80 SUPERFAMILY SSF110296 18 75 7.32E-8 T 12-10-2018 TDE_2258 ca5423261cb4446833b26eeb94aa00fa 355 SUPERFAMILY SSF52058 116 305 2.52E-36 T 12-10-2018 TDE_2258 ca5423261cb4446833b26eeb94aa00fa 355 Gene3D G3DSA:3.80.10.10 164 212 5.3E-18 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2258 ca5423261cb4446833b26eeb94aa00fa 355 Gene3D G3DSA:3.80.10.10 59 163 2.3E-27 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2258 ca5423261cb4446833b26eeb94aa00fa 355 Pfam PF13306 Leucine rich repeats (6 copies) 96 211 2.0E-34 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_2258 ca5423261cb4446833b26eeb94aa00fa 355 Gene3D G3DSA:3.80.10.10 213 352 7.8E-39 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1499 92fcaf86539b294f00df58199452866c 480 Gene3D G3DSA:1.10.275.10 8 119 1.5E-6 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal TDE_1499 92fcaf86539b294f00df58199452866c 480 ProSitePatterns PS00163 Fumarate lyases signature. 296 305 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TDE_1499 92fcaf86539b294f00df58199452866c 480 SMART SM00998 387 473 3.2E-7 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_1499 92fcaf86539b294f00df58199452866c 480 Gene3D G3DSA:1.20.200.10 120 389 6.1E-74 T 12-10-2018 TDE_1499 92fcaf86539b294f00df58199452866c 480 PRINTS PR00145 Argininosuccinate lyase family signature 251 275 3.2E-9 T 12-10-2018 TDE_1499 92fcaf86539b294f00df58199452866c 480 PRINTS PR00145 Argininosuccinate lyase family signature 296 312 3.2E-9 T 12-10-2018 TDE_1499 92fcaf86539b294f00df58199452866c 480 PRINTS PR00145 Argininosuccinate lyase family signature 116 138 3.2E-9 T 12-10-2018 TDE_1499 92fcaf86539b294f00df58199452866c 480 PRINTS PR00145 Argininosuccinate lyase family signature 158 178 3.2E-9 T 12-10-2018 TDE_1499 92fcaf86539b294f00df58199452866c 480 SUPERFAMILY SSF48557 39 444 9.9E-75 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 TDE_1499 92fcaf86539b294f00df58199452866c 480 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 447 1.5E-12 T 12-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 TDE_1499 92fcaf86539b294f00df58199452866c 480 Pfam PF00206 Lyase 45 313 2.8E-37 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal TDE_1499 92fcaf86539b294f00df58199452866c 480 PRINTS PR00149 Fumarate lyase superfamily signature 296 312 1.1E-16 T 12-10-2018 IPR000362 Fumarate lyase family TDE_1499 92fcaf86539b294f00df58199452866c 480 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.1E-16 T 12-10-2018 IPR000362 Fumarate lyase family TDE_1499 92fcaf86539b294f00df58199452866c 480 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.1E-16 T 12-10-2018 IPR000362 Fumarate lyase family TDE_1288 91bdf4effa8f30f6afbf27ebe7350a22 292 Pfam PF02517 CAAX protease self-immunity 148 237 9.1E-22 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TDE_1095 953f174f800e97321403fdca49173aa8 379 TIGRFAM TIGR00492 alr: alanine racemase 3 375 2.8E-103 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 Gene3D G3DSA:3.20.20.10 10 232 3.6E-73 T 12-10-2018 IPR029066 PLP-binding barrel TDE_1095 953f174f800e97321403fdca49173aa8 379 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 SUPERFAMILY SSF51419 8 245 9.91E-65 T 12-10-2018 IPR029066 PLP-binding barrel TDE_1095 953f174f800e97321403fdca49173aa8 379 SMART SM01005 244 374 6.6E-61 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 PRINTS PR00992 Alanine racemase signature 158 169 2.2E-56 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 PRINTS PR00992 Alanine racemase signature 277 292 2.2E-56 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 PRINTS PR00992 Alanine racemase signature 297 314 2.2E-56 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 PRINTS PR00992 Alanine racemase signature 27 43 2.2E-56 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 PRINTS PR00992 Alanine racemase signature 124 136 2.2E-56 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 PRINTS PR00992 Alanine racemase signature 204 231 2.2E-56 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 PRINTS PR00992 Alanine racemase signature 356 369 2.2E-56 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 PRINTS PR00992 Alanine racemase signature 260 275 2.2E-56 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 PRINTS PR00992 Alanine racemase signature 63 81 2.2E-56 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 SUPERFAMILY SSF50621 239 376 2.3E-43 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TDE_1095 953f174f800e97321403fdca49173aa8 379 Pfam PF00842 Alanine racemase, C-terminal domain 244 372 5.2E-41 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 Gene3D G3DSA:2.40.37.10 233 379 8.2E-49 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TDE_1095 953f174f800e97321403fdca49173aa8 379 Hamap MF_01201 Alanine racemase. 1 374 32.766 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1095 953f174f800e97321403fdca49173aa8 379 Pfam PF01168 Alanine racemase, N-terminal domain 8 231 1.3E-67 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_1950 de6d3704913bd359577a8f9d66d1b6b9 357 Gene3D G3DSA:3.40.50.2300 33 313 1.1E-98 T 12-10-2018 TDE_1950 de6d3704913bd359577a8f9d66d1b6b9 357 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 32 351 1.4E-66 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TDE_1950 de6d3704913bd359577a8f9d66d1b6b9 357 SUPERFAMILY SSF53822 45 291 6.91E-17 T 12-10-2018 IPR028082 Periplasmic binding protein-like I TDE_1950 de6d3704913bd359577a8f9d66d1b6b9 357 Gene3D G3DSA:3.40.50.2300 143 346 1.1E-98 T 12-10-2018 TDE_2303 99112e642fa149603bfc0f110540ae3c 130 Gene3D G3DSA:3.40.1350.10 7 128 2.6E-27 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TDE_2303 99112e642fa149603bfc0f110540ae3c 130 SUPERFAMILY SSF52980 7 108 6.17E-18 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TDE_2303 99112e642fa149603bfc0f110540ae3c 130 Pfam PF02021 Uncharacterised protein family UPF0102 8 105 2.9E-23 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 TDE_2303 99112e642fa149603bfc0f110540ae3c 130 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 2 107 4.5E-20 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 TDE_2303 99112e642fa149603bfc0f110540ae3c 130 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 119 19.985 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 TDE_2249 587380e058fd3422bdc5dd97e9c2bb8f 352 ProSitePatterns PS01348 MraY family signature 2. 176 187 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_2249 587380e058fd3422bdc5dd97e9c2bb8f 352 Pfam PF00953 Glycosyl transferase family 4 94 272 2.3E-29 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 TDE_1032 6608ddc0985efcfc122000637565df62 287 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 226 2.3E-47 T 12-10-2018 TDE_1588 3086b082c09995534f368eed2870247f 357 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1588 3086b082c09995534f368eed2870247f 357 Gene3D G3DSA:3.40.50.620 5 346 4.6E-100 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1588 3086b082c09995534f368eed2870247f 357 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 349 7.6E-68 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TDE_1588 3086b082c09995534f368eed2870247f 357 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 155 176 1.2E-23 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TDE_1588 3086b082c09995534f368eed2870247f 357 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.2E-23 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TDE_1588 3086b082c09995534f368eed2870247f 357 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 1.2E-23 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TDE_1588 3086b082c09995534f368eed2870247f 357 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 209 219 1.2E-23 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TDE_1588 3086b082c09995534f368eed2870247f 357 SUPERFAMILY SSF52374 4 351 1.81E-75 T 12-10-2018 TDE_1588 3086b082c09995534f368eed2870247f 357 Pfam PF00579 tRNA synthetases class I (W and Y) 3 305 3.4E-53 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1588 3086b082c09995534f368eed2870247f 357 Gene3D G3DSA:1.10.240.10 195 319 4.6E-100 T 12-10-2018 TDE_0013 eef9911833e8a5a2997295008af64903 293 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 290 40.059 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 289 3.8E-70 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 4.3E-83 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 4.3E-83 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 4.3E-83 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 4.3E-83 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 4.3E-83 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 4.3E-83 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 4.3E-83 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 Gene3D G3DSA:3.40.50.10860 8 283 2.0E-114 T 12-10-2018 TDE_0013 eef9911833e8a5a2997295008af64903 293 SUPERFAMILY SSF53223 1 121 3.64E-39 T 12-10-2018 TDE_0013 eef9911833e8a5a2997295008af64903 293 Gene3D G3DSA:3.40.50.720 6 266 2.0E-114 T 12-10-2018 TDE_0013 eef9911833e8a5a2997295008af64903 293 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 SUPERFAMILY SSF51735 122 289 7.81E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0013 eef9911833e8a5a2997295008af64903 293 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 5.5E-40 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_0013 eef9911833e8a5a2997295008af64903 293 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TDE_1247 68b9d7aa7db2cd68381af1b697fb820f 240 Gene3D G3DSA:2.70.50.70 23 227 6.6E-48 T 12-10-2018 TDE_1247 68b9d7aa7db2cd68381af1b697fb820f 240 Gene3D G3DSA:4.10.520.10 25 114 6.6E-48 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TDE_1247 68b9d7aa7db2cd68381af1b697fb820f 240 Pfam PF14848 DNA-binding domain 1 122 1.1E-38 T 12-10-2018 TDE_1247 68b9d7aa7db2cd68381af1b697fb820f 240 Pfam PF14734 Domain of unknown function (DUF4469) with IG-like fold 130 230 1.8E-31 T 12-10-2018 IPR027824 Domain of unknown function DUF4469 with IG-like fold TDE_0319 6ae966c93687c9fd82bf4709cdddab4b 335 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 40 170 3.4E-63 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 TDE_0319 6ae966c93687c9fd82bf4709cdddab4b 335 Gene3D G3DSA:3.40.50.300 21 187 2.8E-46 T 12-10-2018 TDE_0319 6ae966c93687c9fd82bf4709cdddab4b 335 SUPERFAMILY SSF52540 4 310 8.14E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0319 6ae966c93687c9fd82bf4709cdddab4b 335 Gene3D G3DSA:1.10.8.300 210 332 7.9E-37 T 12-10-2018 TDE_0319 6ae966c93687c9fd82bf4709cdddab4b 335 PIRSF PIRSF002849 3 335 4.3E-129 T 12-10-2018 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 ProSitePatterns PS01071 grpE protein signature. 180 223 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 Gene3D G3DSA:3.90.20.20 43 166 3.5E-29 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 SUPERFAMILY SSF58014 71 165 4.45E-24 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 Gene3D G3DSA:2.30.22.10 169 224 1.4E-18 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 PRINTS PR00773 GrpE protein signature 119 134 4.7E-27 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 PRINTS PR00773 GrpE protein signature 177 192 4.7E-27 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 PRINTS PR00773 GrpE protein signature 204 223 4.7E-27 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 PRINTS PR00773 GrpE protein signature 91 107 4.7E-27 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 SUPERFAMILY SSF51064 171 224 2.22E-16 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 Hamap MF_01151 Protein GrpE [grpE]. 16 225 19.017 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TDE_0627 ea3ab7924fa2e46fee6620793f46bb4e 247 Pfam PF01025 GrpE 62 223 1.3E-46 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TDE_0748 9a2bc4638a125e8c80e861ca2c00a94b 385 SUPERFAMILY SSF53807 62 385 2.16E-51 T 12-10-2018 TDE_0748 9a2bc4638a125e8c80e861ca2c00a94b 385 Pfam PF01497 Periplasmic binding protein 96 341 1.7E-20 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain TDE_0748 9a2bc4638a125e8c80e861ca2c00a94b 385 Gene3D G3DSA:3.40.50.1980 80 375 2.5E-23 T 12-10-2018 TDE_2234 5b4a4ef2fc3298895494e2f84c6a5fc4 311 SUPERFAMILY SSF53807 39 311 1.88E-53 T 12-10-2018 TDE_2234 5b4a4ef2fc3298895494e2f84c6a5fc4 311 Pfam PF01497 Periplasmic binding protein 54 283 2.2E-33 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain TDE_2234 5b4a4ef2fc3298895494e2f84c6a5fc4 311 Gene3D G3DSA:3.40.50.1980 51 172 1.5E-23 T 12-10-2018 TDE_2234 5b4a4ef2fc3298895494e2f84c6a5fc4 311 Gene3D G3DSA:3.40.50.1980 173 308 1.4E-36 T 12-10-2018 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 SMART SM00028 165 198 0.16 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 SMART SM00028 131 164 2.2E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 SMART SM00028 271 304 29.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 SMART SM00028 58 91 49.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 SMART SM00028 97 130 310.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 SMART SM00028 233 266 170.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 Gene3D G3DSA:1.25.40.10 44 126 1.6E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 Pfam PF04471 Restriction endonuclease 363 441 7.0E-6 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 SUPERFAMILY SSF48452 216 320 1.38E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 Pfam PF00515 Tetratricopeptide repeat 135 163 2.6E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 Pfam PF13174 Tetratricopeptide repeat 59 87 0.019 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 SUPERFAMILY SSF48452 50 222 4.64E-27 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 Gene3D G3DSA:1.25.40.10 127 227 1.8E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2672 8dde3a66414b56ff0e5489cd1c62fb82 446 Gene3D G3DSA:1.25.40.10 228 323 6.5E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1715 5d269964e014879d95653c958cd7abce 419 Gene3D G3DSA:3.40.50.1260 6 416 1.6E-157 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PRINTS PR00477 Phosphoglycerate kinase family signature 190 212 1.7E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PRINTS PR00477 Phosphoglycerate kinase family signature 371 382 1.7E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PRINTS PR00477 Phosphoglycerate kinase family signature 335 360 1.7E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 1.7E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PRINTS PR00477 Phosphoglycerate kinase family signature 127 142 1.7E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PRINTS PR00477 Phosphoglycerate kinase family signature 159 181 1.7E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 1.7E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PRINTS PR00477 Phosphoglycerate kinase family signature 394 411 1.7E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PRINTS PR00477 Phosphoglycerate kinase family signature 213 232 1.7E-93 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 Pfam PF00162 Phosphoglycerate kinase 5 408 2.7E-154 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 SUPERFAMILY SSF53748 2 417 6.83E-156 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 4 418 40.891 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 PIRSF PIRSF000724 1 419 2.2E-157 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1715 5d269964e014879d95653c958cd7abce 419 Gene3D G3DSA:3.40.50.1260 192 408 1.6E-157 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1104 fd4db260a0f6a386d34e07eac3552a86 357 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 7 232 2.8E-66 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_1104 fd4db260a0f6a386d34e07eac3552a86 357 Gene3D G3DSA:3.30.2350.10 2 257 1.1E-70 T 12-10-2018 TDE_1104 fd4db260a0f6a386d34e07eac3552a86 357 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 5 355 15.262 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_1104 fd4db260a0f6a386d34e07eac3552a86 357 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 27 193 3.6E-40 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 TDE_1104 fd4db260a0f6a386d34e07eac3552a86 357 SUPERFAMILY SSF55120 5 243 1.38E-58 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_0775 d1c2344705cedbf4fc885c5e0f5b81d4 69 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 14.871 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0775 d1c2344705cedbf4fc885c5e0f5b81d4 69 TIGRFAM TIGR00012 L29: ribosomal protein uL29 8 61 8.8E-14 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0775 d1c2344705cedbf4fc885c5e0f5b81d4 69 Pfam PF00831 Ribosomal L29 protein 6 61 2.6E-17 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0775 d1c2344705cedbf4fc885c5e0f5b81d4 69 SUPERFAMILY SSF46561 5 64 3.53E-16 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0775 d1c2344705cedbf4fc885c5e0f5b81d4 69 Gene3D G3DSA:1.10.287.310 1 67 5.3E-20 T 12-10-2018 TDE_0784 c52ab6d5227d0c78b95fecc304ce7be8 173 ProSitePatterns PS00585 Ribosomal protein S5 signature. 35 67 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site TDE_0784 c52ab6d5227d0c78b95fecc304ce7be8 173 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 164 2.6E-24 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 TDE_0784 c52ab6d5227d0c78b95fecc304ce7be8 173 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 170 33.808 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TDE_0784 c52ab6d5227d0c78b95fecc304ce7be8 173 SUPERFAMILY SSF54768 14 83 2.2E-21 T 12-10-2018 TDE_0784 c52ab6d5227d0c78b95fecc304ce7be8 173 Gene3D G3DSA:3.30.230.10 81 173 8.8E-32 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_0784 c52ab6d5227d0c78b95fecc304ce7be8 173 Gene3D G3DSA:3.30.160.20 9 80 4.5E-29 T 12-10-2018 TDE_0784 c52ab6d5227d0c78b95fecc304ce7be8 173 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 168 3.2E-64 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TDE_0784 c52ab6d5227d0c78b95fecc304ce7be8 173 Pfam PF00333 Ribosomal protein S5, N-terminal domain 20 80 5.8E-27 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 TDE_0784 c52ab6d5227d0c78b95fecc304ce7be8 173 SUPERFAMILY SSF54211 86 166 1.82E-22 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_2372 d1cac47e06be27d9f9173008b38ccb60 202 Gene3D G3DSA:3.40.30.10 22 201 3.0E-27 T 12-10-2018 TDE_2372 d1cac47e06be27d9f9173008b38ccb60 202 ProSitePatterns PS00194 Thioredoxin family active site. 81 99 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TDE_2372 d1cac47e06be27d9f9173008b38ccb60 202 Pfam PF08534 Redoxin 59 174 4.5E-14 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 TDE_2372 d1cac47e06be27d9f9173008b38ccb60 202 SUPERFAMILY SSF52833 58 193 3.02E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily TDE_0069 f74eee7cefd3b5349e191cd4ece171a5 338 SMART SM00729 81 280 0.0059 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_0069 f74eee7cefd3b5349e191cd4ece171a5 338 PIRSF PIRSF004911 2 333 7.5E-99 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase TDE_0069 f74eee7cefd3b5349e191cd4ece171a5 338 TIGRFAM TIGR00238 TIGR00238: KamA family protein 20 297 2.0E-63 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase TDE_0069 f74eee7cefd3b5349e191cd4ece171a5 338 Gene3D G3DSA:3.20.20.70 19 305 3.6E-85 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0069 f74eee7cefd3b5349e191cd4ece171a5 338 SUPERFAMILY SSF102114 77 309 2.09E-27 T 12-10-2018 TDE_0479 22183f52848a4d8fa93d1976b5ceee4f 543 Gene3D G3DSA:1.20.1270.20 1 138 4.7E-34 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TDE_0479 22183f52848a4d8fa93d1976b5ceee4f 543 Gene3D G3DSA:1.20.1270.20 139 222 2.8E-32 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TDE_0479 22183f52848a4d8fa93d1976b5ceee4f 543 Hamap MF_00069 Hydroxylamine reductase [hcp]. 4 543 22.242 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TDE_0479 22183f52848a4d8fa93d1976b5ceee4f 543 Gene3D G3DSA:3.40.50.2030 224 372 1.5E-66 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TDE_0479 22183f52848a4d8fa93d1976b5ceee4f 543 PIRSF PIRSF000076 4 543 1.0E-244 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TDE_0479 22183f52848a4d8fa93d1976b5ceee4f 543 SUPERFAMILY SSF56821 3 541 8.9E-199 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 TDE_0479 22183f52848a4d8fa93d1976b5ceee4f 543 Gene3D G3DSA:3.40.50.2030 373 542 2.9E-60 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TDE_0479 22183f52848a4d8fa93d1976b5ceee4f 543 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 4 541 5.6E-217 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TDE_0479 22183f52848a4d8fa93d1976b5ceee4f 543 Pfam PF03063 Prismane/CO dehydrogenase family 4 539 1.1E-166 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 TDE_0881 198a3fee2c1202c27ab75d0c6e03a570 81 Pfam PF00886 Ribosomal protein S16 8 67 8.8E-23 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0881 198a3fee2c1202c27ab75d0c6e03a570 81 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 6.4E-32 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0881 198a3fee2c1202c27ab75d0c6e03a570 81 SUPERFAMILY SSF54565 2 78 7.59E-30 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0881 198a3fee2c1202c27ab75d0c6e03a570 81 Gene3D G3DSA:3.30.1320.10 1 81 2.2E-31 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0881 198a3fee2c1202c27ab75d0c6e03a570 81 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 77 24.732 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1236 1d750c7bcd03e9d3993d24ed06a6826d 250 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1236 1d750c7bcd03e9d3993d24ed06a6826d 250 Gene3D G3DSA:3.20.20.70 1 248 1.4E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_1236 1d750c7bcd03e9d3993d24ed06a6826d 250 SUPERFAMILY SSF51351 2 245 1.05E-87 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1236 1d750c7bcd03e9d3993d24ed06a6826d 250 Pfam PF00121 Triosephosphate isomerase 5 245 1.4E-92 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1236 1d750c7bcd03e9d3993d24ed06a6826d 250 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 240 4.7E-53 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1236 1d750c7bcd03e9d3993d24ed06a6826d 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 60.02 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 SUPERFAMILY SSF52540 27 526 3.09E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 SMART SM00487 29 213 1.9E-25 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 Gene3D G3DSA:3.40.50.300 6 205 1.6E-74 T 12-10-2018 TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 Gene3D G3DSA:3.40.50.300 207 384 1.4E-54 T 12-10-2018 TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 Gene3D G3DSA:1.20.120.1080 409 507 1.2E-10 T 12-10-2018 TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 Pfam PF00270 DEAD/DEAH box helicase 38 189 6.3E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 146 155 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 Pfam PF04408 Helicase associated domain (HA2) 427 502 5.9E-12 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 Pfam PF00271 Helicase conserved C-terminal domain 242 365 2.4E-15 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 577 649 8.4E-9 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 SMART SM00847 426 518 2.3E-17 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 TDE_1654 24fcc155bbb378605966bcd30e1b54fd 870 SMART SM00490 267 366 1.5E-15 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 Pfam PF04539 Sigma-70 region 3 464 538 4.5E-27 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 SUPERFAMILY SSF88659 458 531 7.03E-21 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 Pfam PF04545 Sigma-70, region 4 553 606 2.1E-18 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 618 35.965 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 Gene3D G3DSA:1.10.10.10 458 533 9.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 Gene3D G3DSA:1.10.601.10 129 457 3.3E-80 T 12-10-2018 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 Pfam PF00140 Sigma-70 factor, region 1.2 131 162 2.7E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 409 422 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 Pfam PF04542 Sigma-70 region 2 385 454 2.1E-20 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 381 617 1.9E-116 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 Gene3D G3DSA:1.10.10.10 534 619 1.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 PRINTS PR00046 Major sigma-70 factor signature 409 422 2.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 PRINTS PR00046 Major sigma-70 factor signature 578 593 2.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 PRINTS PR00046 Major sigma-70 factor signature 557 569 2.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 PRINTS PR00046 Major sigma-70 factor signature 593 604 2.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 PRINTS PR00046 Major sigma-70 factor signature 433 441 2.2E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 Pfam PF03979 Sigma-70 factor, region 1.1 7 79 5.2E-7 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 381 606 2.2E-37 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 SUPERFAMILY SSF88659 515 617 1.64E-26 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 578 604 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_1346 f86471c6ec3559fd9440e8e880c9654a 619 SUPERFAMILY SSF88946 216 452 1.88E-54 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TDE_1598 bdae099113fd63790642ea87bfb4c9ed 502 SUPERFAMILY SSF52540 265 476 3.07E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1598 bdae099113fd63790642ea87bfb4c9ed 502 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1598 bdae099113fd63790642ea87bfb4c9ed 502 Gene3D G3DSA:3.40.50.300 268 493 1.2E-53 T 12-10-2018 TDE_1598 bdae099113fd63790642ea87bfb4c9ed 502 SMART SM00382 296 498 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1598 bdae099113fd63790642ea87bfb4c9ed 502 SMART SM00382 32 211 2.5E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1598 bdae099113fd63790642ea87bfb4c9ed 502 Gene3D G3DSA:3.40.50.300 2 267 3.2E-55 T 12-10-2018 TDE_1598 bdae099113fd63790642ea87bfb4c9ed 502 Pfam PF00005 ABC transporter 23 174 6.0E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1598 bdae099113fd63790642ea87bfb4c9ed 502 SUPERFAMILY SSF52540 3 232 5.32E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1598 bdae099113fd63790642ea87bfb4c9ed 502 Pfam PF00005 ABC transporter 287 427 3.6E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2076 58ffed503e5c39136abb30bb8e68977d 492 SUPERFAMILY SSF53850 41 449 1.59E-27 T 12-10-2018 TDE_2076 58ffed503e5c39136abb30bb8e68977d 492 Pfam PF13416 Bacterial extracellular solute-binding protein 94 393 1.8E-19 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein TDE_2076 58ffed503e5c39136abb30bb8e68977d 492 Gene3D G3DSA:3.40.190.10 38 465 2.1E-32 T 12-10-2018 TDE_2493 4f590562e37f374dc6077749953eeb54 539 SUPERFAMILY SSF56436 314 537 2.35E-37 T 12-10-2018 IPR016187 C-type lectin fold TDE_2493 4f590562e37f374dc6077749953eeb54 539 Gene3D G3DSA:3.90.1580.10 284 539 2.9E-60 T 12-10-2018 TDE_2493 4f590562e37f374dc6077749953eeb54 539 Pfam PF03781 Sulfatase-modifying factor enzyme 1 318 536 4.2E-27 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_2574 a175545342ad5edd4f698ca6e2693baa 212 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 212 25.015 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 TDE_2574 a175545342ad5edd4f698ca6e2693baa 212 Pfam PF01926 50S ribosome-binding GTPase 26 146 8.5E-16 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_2574 a175545342ad5edd4f698ca6e2693baa 212 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 6 208 1.3E-48 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 TDE_2574 a175545342ad5edd4f698ca6e2693baa 212 Gene3D G3DSA:3.40.50.300 1 212 6.7E-42 T 12-10-2018 TDE_2574 a175545342ad5edd4f698ca6e2693baa 212 SUPERFAMILY SSF52540 19 210 3.56E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0438 f20d4cec504321f368a22754c0314501 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 135 370 7.3E-75 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TDE_0438 f20d4cec504321f368a22754c0314501 379 Gene3D G3DSA:3.20.20.105 1 378 4.2E-149 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TDE_0438 f20d4cec504321f368a22754c0314501 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 373 50.398 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TDE_0438 f20d4cec504321f368a22754c0314501 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 11 377 3.5E-142 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TDE_0438 f20d4cec504321f368a22754c0314501 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 16 376 6.2E-149 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TDE_0438 f20d4cec504321f368a22754c0314501 379 SUPERFAMILY SSF51713 7 374 9.68E-139 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TDE_2395 3e9262c60896d193e26c63bf47c51d77 236 Gene3D G3DSA:3.30.1370.50 170 235 5.2E-22 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 TDE_2395 3e9262c60896d193e26c63bf47c51d77 236 Pfam PF01424 R3H domain 174 232 6.8E-13 T 12-10-2018 IPR001374 R3H domain GO:0003676 TDE_2395 3e9262c60896d193e26c63bf47c51d77 236 SUPERFAMILY SSF82708 183 233 7.06E-6 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 TDE_2395 3e9262c60896d193e26c63bf47c51d77 236 Gene3D G3DSA:3.30.300.20 87 169 3.4E-17 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_2395 3e9262c60896d193e26c63bf47c51d77 236 Pfam PF13083 KH domain 95 161 2.6E-8 T 12-10-2018 TDE_2395 3e9262c60896d193e26c63bf47c51d77 236 Pfam PF14804 Jag N-terminus 5 52 1.8E-11 T 12-10-2018 IPR032782 Jag, N-terminal TDE_2395 3e9262c60896d193e26c63bf47c51d77 236 SMART SM00393 155 234 3.3E-24 T 12-10-2018 IPR001374 R3H domain GO:0003676 TDE_2395 3e9262c60896d193e26c63bf47c51d77 236 SMART SM01245 4 53 2.5E-12 T 12-10-2018 IPR032782 Jag, N-terminal TDE_1573 0947b741e639ec9505cdf8bdfe5e4546 85 Pfam PF04221 RelB antitoxin 3 52 4.1E-10 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_1573 0947b741e639ec9505cdf8bdfe5e4546 85 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 82 1.1E-20 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_1573 0947b741e639ec9505cdf8bdfe5e4546 85 Gene3D G3DSA:1.10.1220.10 1 51 1.3E-9 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TDE_2363 f3f8b15aca63254e7598e3afbd62811f 235 SUPERFAMILY SSF52540 2 232 1.08E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2363 f3f8b15aca63254e7598e3afbd62811f 235 SMART SM00382 27 213 2.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2363 f3f8b15aca63254e7598e3afbd62811f 235 Gene3D G3DSA:3.40.50.300 1 235 2.2E-64 T 12-10-2018 TDE_2363 f3f8b15aca63254e7598e3afbd62811f 235 PIRSF PIRSF039137 1 235 6.7E-110 T 12-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 TDE_2363 f3f8b15aca63254e7598e3afbd62811f 235 Pfam PF00005 ABC transporter 19 162 1.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2363 f3f8b15aca63254e7598e3afbd62811f 235 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1518 d9a7f60453f8128110ba9ce9e1ed0265 403 Pfam PF02687 FtsX-like permease family 301 397 1.0E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TDE_2778 4892e279d63ca46b708020bbbb3b6248 77 Pfam PF04024 PspC domain 3 59 5.4E-22 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal TDE_1157 73811b6204a785dd1fae91c6b706838b 417 Gene3D G3DSA:3.30.420.280 192 390 5.3E-33 T 12-10-2018 TDE_1157 73811b6204a785dd1fae91c6b706838b 417 Gene3D G3DSA:3.40.50.300 1 188 3.7E-17 T 12-10-2018 TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 2.9E-68 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 SUPERFAMILY SSF56059 115 324 3.03E-62 T 12-10-2018 TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 Gene3D G3DSA:3.30.470.130 1 437 1.0E-168 T 12-10-2018 TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 Pfam PF02785 Biotin carboxylase C-terminal domain 341 431 4.8E-25 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 SUPERFAMILY SSF52440 1 113 3.67E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 SUPERFAMILY SSF51246 330 435 2.04E-29 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 9.6E-44 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TDE_0591 98d5b41700798d973f46226e03b8cb2f 439 SMART SM00878 335 433 1.9E-35 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TDE_1505 59946357ccf5d805062feb50f93c4143 147 Gene3D G3DSA:2.40.50.140 91 145 5.0E-14 T 12-10-2018 TDE_1505 59946357ccf5d805062feb50f93c4143 147 SUPERFAMILY SSF141322 101 145 1.57E-5 T 12-10-2018 TDE_1505 59946357ccf5d805062feb50f93c4143 147 Pfam PF01957 NfeD-like C-terminal, partner-binding 6 145 2.6E-18 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain TDE_0816 58b7700df2a20bd5f50a43447560872f 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 382 1.0E-80 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 TDE_0816 58b7700df2a20bd5f50a43447560872f 397 PIRSF PIRSF005962 1 397 1.9E-118 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 TDE_0816 58b7700df2a20bd5f50a43447560872f 397 Gene3D G3DSA:3.40.630.10 17 380 4.9E-102 T 12-10-2018 TDE_0816 58b7700df2a20bd5f50a43447560872f 397 SUPERFAMILY SSF55031 189 296 1.08E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TDE_0816 58b7700df2a20bd5f50a43447560872f 397 Pfam PF07687 Peptidase dimerisation domain 188 284 1.1E-11 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain TDE_0816 58b7700df2a20bd5f50a43447560872f 397 Pfam PF01546 Peptidase family M20/M25/M40 74 391 3.8E-22 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 TDE_0816 58b7700df2a20bd5f50a43447560872f 397 Gene3D G3DSA:3.30.70.360 187 304 4.9E-102 T 12-10-2018 TDE_0816 58b7700df2a20bd5f50a43447560872f 397 SUPERFAMILY SSF53187 5 395 3.05E-60 T 12-10-2018 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 339 1.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 353 1.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 391 1.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 372 1.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 Gene3D G3DSA:1.10.287.130 163 243 1.2E-14 T 12-10-2018 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 SUPERFAMILY SSF47384 162 242 1.35E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 288 393 1.7E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 SMART SM00388 175 246 3.3E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 SUPERFAMILY SSF55874 241 392 8.91E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 Pfam PF08448 PAS fold 39 161 2.9E-6 T 12-10-2018 IPR013656 PAS fold-4 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 SMART SM00387 288 394 2.4E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 239 9.0E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 Gene3D G3DSA:3.30.565.10 247 399 4.5E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 SUPERFAMILY SSF55785 22 158 1.47E-9 T 12-10-2018 IPR035965 PAS domain superfamily TDE_1970 9edec77525aeb1e8d45f167459a9ba89 415 Gene3D G3DSA:3.30.450.20 24 162 3.9E-14 T 12-10-2018 TDE_2132 b62e66dde95078dead7a1e28a4340e0d 261 SMART SM00382 28 234 4.3E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2132 b62e66dde95078dead7a1e28a4340e0d 261 SUPERFAMILY SSF52540 4 229 1.33E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2132 b62e66dde95078dead7a1e28a4340e0d 261 Pfam PF00005 ABC transporter 20 164 2.4E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2132 b62e66dde95078dead7a1e28a4340e0d 261 Gene3D G3DSA:3.40.50.300 1 255 2.4E-63 T 12-10-2018 TDE_2536 c9b0b5c80240449e060025e1e0c54bca 313 Gene3D G3DSA:1.10.10.1880 163 229 2.0E-11 T 12-10-2018 TDE_2536 c9b0b5c80240449e060025e1e0c54bca 313 Gene3D G3DSA:3.40.50.1010 1 140 1.0E-9 T 12-10-2018 TDE_2536 c9b0b5c80240449e060025e1e0c54bca 313 Gene3D G3DSA:2.40.50.140 230 307 1.8E-5 T 12-10-2018 TDE_2536 c9b0b5c80240449e060025e1e0c54bca 313 Pfam PF01936 NYN domain 5 136 1.0E-23 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type TDE_2536 c9b0b5c80240449e060025e1e0c54bca 313 Pfam PF12872 OST-HTH/LOTUS domain 169 221 1.4E-11 T 12-10-2018 IPR025605 OST-HTH/LOTUS domain TDE_0450 cc0cc5eb25e491a91740fb1bf6ec6a28 477 Pfam PF01546 Peptidase family M20/M25/M40 112 475 3.2E-33 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 TDE_0450 cc0cc5eb25e491a91740fb1bf6ec6a28 477 Gene3D G3DSA:3.40.630.10 35 236 7.0E-39 T 12-10-2018 TDE_0450 cc0cc5eb25e491a91740fb1bf6ec6a28 477 SUPERFAMILY SSF55031 234 384 6.11E-11 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TDE_0450 cc0cc5eb25e491a91740fb1bf6ec6a28 477 SUPERFAMILY SSF53187 33 476 1.26E-47 T 12-10-2018 TDE_0450 cc0cc5eb25e491a91740fb1bf6ec6a28 477 Pfam PF07687 Peptidase dimerisation domain 230 378 6.5E-13 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Pfam PF03764 Elongation factor G, domain IV 475 593 1.5E-38 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 SMART SM00838 595 682 9.7E-40 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like TDE_1049 4b0266639de5f09081e66229c95fcff1 695 SMART SM00889 476 593 1.5E-59 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Gene3D G3DSA:3.30.70.870 402 479 1.5E-28 T 12-10-2018 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 SUPERFAMILY SSF54980 398 476 4.68E-23 T 12-10-2018 IPR035647 EF-G domain III/V-like TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Pfam PF00679 Elongation factor G C-terminus 596 681 3.1E-26 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like TDE_1049 4b0266639de5f09081e66229c95fcff1 695 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 4 685 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Pfam PF00009 Elongation factor Tu GTP binding domain 7 279 1.3E-59 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Gene3D G3DSA:2.40.30.10 291 401 1.0E-30 T 12-10-2018 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Pfam PF03144 Elongation factor Tu domain 2 321 387 3.0E-13 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Gene3D G3DSA:3.30.230.10 480 681 3.5E-78 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_1049 4b0266639de5f09081e66229c95fcff1 695 SUPERFAMILY SSF54211 478 594 2.35E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_1049 4b0266639de5f09081e66229c95fcff1 695 SUPERFAMILY SSF50447 248 398 1.88E-26 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_1049 4b0266639de5f09081e66229c95fcff1 695 SUPERFAMILY SSF52540 4 280 2.91E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Pfam PF14492 Elongation Factor G, domain II 400 473 2.5E-32 T 12-10-2018 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 SUPERFAMILY SSF54980 598 689 5.76E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Gene3D G3DSA:3.40.50.300 2 290 7.6E-100 T 12-10-2018 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Hamap MF_00054_B Elongation factor G [fusA]. 4 686 106.373 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 Gene3D G3DSA:3.30.70.240 599 669 3.5E-78 T 12-10-2018 TDE_1049 4b0266639de5f09081e66229c95fcff1 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site TDE_1049 4b0266639de5f09081e66229c95fcff1 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 180 9.6E-25 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 Pfam PF06723 MreB/Mbl protein 9 332 2.0E-140 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 331 1.0E-155 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 SUPERFAMILY SSF53067 7 144 5.29E-35 T 12-10-2018 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 Gene3D G3DSA:3.30.420.40 151 314 7.4E-120 T 12-10-2018 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 Gene3D G3DSA:3.90.640.10 183 256 7.4E-120 T 12-10-2018 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 7.2E-52 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 7.2E-52 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 7.2E-52 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 7.2E-52 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 7.2E-52 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 Gene3D G3DSA:3.30.420.40 11 324 7.4E-120 T 12-10-2018 TDE_1349 9cd46f5721e31aca0ed3daeceb72f232 344 SUPERFAMILY SSF53067 147 328 7.66E-47 T 12-10-2018 TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 44 60 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 SUPERFAMILY SSF51206 9 136 9.56E-32 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 SUPERFAMILY SSF55073 168 321 1.96E-37 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 PRINTS PR00103 cAMP-dependent protein kinase signature 38 52 1.3E-5 T 12-10-2018 TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 PRINTS PR00103 cAMP-dependent protein kinase signature 82 91 1.3E-5 T 12-10-2018 TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 PRINTS PR00103 cAMP-dependent protein kinase signature 53 67 1.3E-5 T 12-10-2018 TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 PRINTS PR00103 cAMP-dependent protein kinase signature 123 134 1.3E-5 T 12-10-2018 TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 4.8E-22 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 160 320 3.0E-36 T 12-10-2018 IPR000160 GGDEF domain TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 SMART SM00100 17 137 3.2E-19 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 Gene3D G3DSA:3.30.70.270 155 319 1.2E-41 T 12-10-2018 TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 SMART SM00267 152 320 1.2E-34 T 12-10-2018 IPR000160 GGDEF domain TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 Gene3D G3DSA:2.60.120.10 2 149 5.1E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_2725 b2a628079f9f9a5b0a1aa3ebaf66f6eb 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 316 1.3E-33 T 12-10-2018 IPR000160 GGDEF domain TDE_1644 47748da7a268922ee08b1d2ec6774fff 322 Gene3D G3DSA:3.10.25.10 212 321 3.3E-33 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TDE_1644 47748da7a268922ee08b1d2ec6774fff 322 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 315 27.487 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TDE_1644 47748da7a268922ee08b1d2ec6774fff 322 Pfam PF02911 Formyl transferase, C-terminal domain 210 312 4.7E-29 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TDE_1644 47748da7a268922ee08b1d2ec6774fff 322 Gene3D G3DSA:3.40.50.170 1 211 4.2E-58 T 12-10-2018 TDE_1644 47748da7a268922ee08b1d2ec6774fff 322 SUPERFAMILY SSF50486 210 318 2.83E-28 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 TDE_1644 47748da7a268922ee08b1d2ec6774fff 322 Pfam PF00551 Formyl transferase 7 176 1.6E-28 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TDE_1644 47748da7a268922ee08b1d2ec6774fff 322 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 312 1.5E-76 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TDE_1644 47748da7a268922ee08b1d2ec6774fff 322 SUPERFAMILY SSF53328 1 212 2.35E-44 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TDE_1194 b35b8260302513eb1a556d1e43415803 856 Pfam PF10101 Predicted membrane protein (DUF2339) 134 838 1.4E-95 T 12-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane TDE_1194 b35b8260302513eb1a556d1e43415803 856 SUPERFAMILY SSF103473 4 292 5.49E-6 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_2171 f6477da9a5c199399ade85f4cbe58991 254 SUPERFAMILY SSF53335 49 234 1.88E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2171 f6477da9a5c199399ade85f4cbe58991 254 Pfam PF08241 Methyltransferase domain 60 156 5.0E-15 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TDE_2171 f6477da9a5c199399ade85f4cbe58991 254 Gene3D G3DSA:3.40.50.150 46 243 1.2E-23 T 12-10-2018 TDE_2411 9eb30edb1f735124d43bb2d287f3be5a 817 PIRSF PIRSF000460 2 817 2.4E-253 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TDE_2411 9eb30edb1f735124d43bb2d287f3be5a 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 809 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TDE_2411 9eb30edb1f735124d43bb2d287f3be5a 817 SUPERFAMILY SSF53756 4 815 2.75E-300 T 12-10-2018 TDE_2411 9eb30edb1f735124d43bb2d287f3be5a 817 Pfam PF00343 Carbohydrate phosphorylase 100 809 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TDE_2411 9eb30edb1f735124d43bb2d287f3be5a 817 Gene3D G3DSA:3.40.50.2000 19 811 0.0 T 12-10-2018 TDE_2411 9eb30edb1f735124d43bb2d287f3be5a 817 Gene3D G3DSA:3.40.50.2000 462 795 0.0 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.1E-15 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 1.1E-15 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 1.1E-15 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 1.1E-15 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 Gene3D G3DSA:3.50.50.60 17 310 5.8E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 4.0E-20 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 4.0E-20 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 4.0E-20 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 4.0E-20 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 121 139 4.0E-20 T 12-10-2018 TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 SUPERFAMILY SSF51905 17 329 7.45E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 Gene3D G3DSA:3.50.50.60 133 267 5.8E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_2644 1e2a4a8f29efdc40ad01c197269ee90e 442 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 311 5.7E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_0305 40520626662edc41ba38cf5d95d67339 368 Gene3D G3DSA:3.10.20.30 48 366 5.0E-147 T 12-10-2018 IPR012675 Beta-grasp domain superfamily TDE_0305 40520626662edc41ba38cf5d95d67339 368 Pfam PF06071 Protein of unknown function (DUF933) 284 367 2.0E-40 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 TDE_0305 40520626662edc41ba38cf5d95d67339 368 SUPERFAMILY SSF81271 284 365 1.61E-35 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TDE_0305 40520626662edc41ba38cf5d95d67339 368 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 368 42.886 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TDE_0305 40520626662edc41ba38cf5d95d67339 368 SUPERFAMILY SSF52540 3 305 2.81E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0305 40520626662edc41ba38cf5d95d67339 368 Pfam PF01926 50S ribosome-binding GTPase 5 127 3.2E-22 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0305 40520626662edc41ba38cf5d95d67339 368 PIRSF PIRSF006641 1 368 2.3E-155 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TDE_0305 40520626662edc41ba38cf5d95d67339 368 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 368 9.9E-143 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TDE_0305 40520626662edc41ba38cf5d95d67339 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.6E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0305 40520626662edc41ba38cf5d95d67339 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.6E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0305 40520626662edc41ba38cf5d95d67339 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.6E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0305 40520626662edc41ba38cf5d95d67339 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.6E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0305 40520626662edc41ba38cf5d95d67339 368 Gene3D G3DSA:3.40.50.300 4 283 5.0E-147 T 12-10-2018 TDE_0305 40520626662edc41ba38cf5d95d67339 368 Gene3D G3DSA:1.10.150.300 113 203 5.0E-147 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 TDE_0274 1d0b3381ce17b2073deeeffe5f65e057 597 Pfam PF00005 ABC transporter 357 506 9.6E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0274 1d0b3381ce17b2073deeeffe5f65e057 597 SMART SM00382 366 552 2.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0274 1d0b3381ce17b2073deeeffe5f65e057 597 Gene3D G3DSA:1.20.1560.10 1 330 5.1E-48 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0274 1d0b3381ce17b2073deeeffe5f65e057 597 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0274 1d0b3381ce17b2073deeeffe5f65e057 597 SUPERFAMILY SSF90123 16 327 4.97E-55 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0274 1d0b3381ce17b2073deeeffe5f65e057 597 Gene3D G3DSA:3.40.50.300 333 591 1.1E-84 T 12-10-2018 TDE_0274 1d0b3381ce17b2073deeeffe5f65e057 597 SUPERFAMILY SSF52540 334 575 2.72E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0274 1d0b3381ce17b2073deeeffe5f65e057 597 Pfam PF00664 ABC transporter transmembrane region 30 298 1.8E-21 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 Gene3D G3DSA:2.60.40.10 2 147 8.1E-35 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 12 699 1.4E-222 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 Pfam PF00128 Alpha amylase, catalytic domain 193 314 2.4E-11 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 Gene3D G3DSA:2.60.40.1180 604 714 9.4E-22 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 SUPERFAMILY SSF81296 12 162 7.0E-32 T 12-10-2018 IPR014756 Immunoglobulin E-set TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 108 5.3E-14 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 SUPERFAMILY SSF51011 606 714 1.94E-18 T 12-10-2018 TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 SUPERFAMILY SSF51445 149 589 7.88E-127 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 Gene3D G3DSA:3.20.20.80 151 597 1.8E-171 T 12-10-2018 TDE_0101 899e112a4e6f23f00b7609c9b5ead78e 714 SMART SM00642 174 583 2.3E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TDE_1493 e6d5558ced095fc54fc0087fa92c32a1 154 SUPERFAMILY SSF103039 1 150 2.75E-35 T 12-10-2018 IPR028976 CheC-like superfamily TDE_1493 e6d5558ced095fc54fc0087fa92c32a1 154 Pfam PF13690 Chemotaxis phosphatase CheX 42 136 7.2E-19 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain TDE_1493 e6d5558ced095fc54fc0087fa92c32a1 154 Gene3D G3DSA:3.40.1550.10 1 153 2.2E-40 T 12-10-2018 IPR028976 CheC-like superfamily TDE_2561 a8f8c68ee897605231ec8e0c670c7278 227 SUPERFAMILY SSF52540 2 206 3.14E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2561 a8f8c68ee897605231ec8e0c670c7278 227 Gene3D G3DSA:3.40.50.300 1 221 9.9E-53 T 12-10-2018 TDE_2561 a8f8c68ee897605231ec8e0c670c7278 227 SMART SM00382 28 200 5.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2561 a8f8c68ee897605231ec8e0c670c7278 227 Pfam PF00005 ABC transporter 19 148 7.8E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1909 8ffe56cace3867373039a1e6cda4912e 274 SUPERFAMILY SSF143597 43 239 3.4E-57 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily TDE_1909 8ffe56cace3867373039a1e6cda4912e 274 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 12 249 2.2E-67 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 TDE_1909 8ffe56cace3867373039a1e6cda4912e 274 Hamap MF_01499 Diadenylate cyclase [dacA]. 2 253 29.858 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 TDE_1909 8ffe56cace3867373039a1e6cda4912e 274 Gene3D G3DSA:3.40.1700.10 102 253 7.0E-53 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily TDE_1909 8ffe56cace3867373039a1e6cda4912e 274 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 117 234 6.8E-40 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal TDE_1909 8ffe56cace3867373039a1e6cda4912e 274 PIRSF PIRSF004793 6 264 5.2E-85 T 12-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 TDE_0636 2656768d46937d477549ff56feb4334c 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 228 317 7.6E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0636 2656768d46937d477549ff56feb4334c 322 Pfam PF00005 ABC transporter 27 178 4.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0636 2656768d46937d477549ff56feb4334c 322 SMART SM00382 35 228 6.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0636 2656768d46937d477549ff56feb4334c 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 297 4.2E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0636 2656768d46937d477549ff56feb4334c 322 Gene3D G3DSA:3.40.50.300 3 320 1.5E-98 T 12-10-2018 TDE_0636 2656768d46937d477549ff56feb4334c 322 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0636 2656768d46937d477549ff56feb4334c 322 SUPERFAMILY SSF52540 5 249 8.91E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 Gene3D G3DSA:3.40.50.620 211 403 2.1E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 SUPERFAMILY SSF52317 18 211 1.76E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 19 205 3.5E-74 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 SUPERFAMILY SSF54810 403 523 1.7E-50 T 12-10-2018 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 90 101 1.7E-5 T 12-10-2018 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 178 191 1.7E-5 T 12-10-2018 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 63 72 1.7E-5 T 12-10-2018 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 214 523 1.2E-143 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 SUPERFAMILY SSF52402 194 444 1.21E-51 T 12-10-2018 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 Gene3D G3DSA:3.40.50.880 15 210 1.9E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 90 106 5.9E-5 T 12-10-2018 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 60 74 5.9E-5 T 12-10-2018 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 19 33 5.9E-5 T 12-10-2018 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 Gene3D G3DSA:3.30.300.10 404 523 1.1E-52 T 12-10-2018 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 16 523 52.36 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 Pfam PF00117 Glutamine amidotransferase class-I 21 201 7.1E-38 T 12-10-2018 IPR017926 Glutamine amidotransferase TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 Pfam PF01171 PP-loop family 230 272 5.8E-5 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TDE_1718 038574aba9884bb946e75aa9ed5cb993 523 Pfam PF00958 GMP synthase C terminal domain 432 522 9.6E-43 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TDE_0487 3896747166cee4b5d87518ffa936e63a 261 Gene3D G3DSA:3.40.50.300 1 260 3.2E-52 T 12-10-2018 TDE_0487 3896747166cee4b5d87518ffa936e63a 261 SMART SM00382 47 232 1.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0487 3896747166cee4b5d87518ffa936e63a 261 Pfam PF00005 ABC transporter 38 182 1.7E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0487 3896747166cee4b5d87518ffa936e63a 261 SUPERFAMILY SSF52540 32 245 1.62E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2460 d0b66f8c9c7eb7488b3d67af68c071b8 388 Pfam PF00266 Aminotransferase class-V 5 375 3.6E-72 T 12-10-2018 IPR000192 Aminotransferase class V domain TDE_2460 d0b66f8c9c7eb7488b3d67af68c071b8 388 SUPERFAMILY SSF53383 2 385 2.32E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_2460 d0b66f8c9c7eb7488b3d67af68c071b8 388 PIRSF PIRSF005572 2 388 4.2E-50 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TDE_2460 d0b66f8c9c7eb7488b3d67af68c071b8 388 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 5 384 6.0E-124 T 12-10-2018 IPR010969 Cysteine desulfurase-related, unknown function TDE_2460 d0b66f8c9c7eb7488b3d67af68c071b8 388 Gene3D G3DSA:3.40.640.10 19 274 6.4E-101 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_2460 d0b66f8c9c7eb7488b3d67af68c071b8 388 Gene3D G3DSA:3.90.1150.10 5 378 6.4E-101 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_0614 9cdab51ff7795b4f139a8cbf22fdb0ab 249 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 2 245 5.8E-101 T 12-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 TDE_0614 9cdab51ff7795b4f139a8cbf22fdb0ab 249 SUPERFAMILY SSF53790 1 245 2.75E-63 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TDE_0614 9cdab51ff7795b4f139a8cbf22fdb0ab 249 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 5 19 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TDE_0614 9cdab51ff7795b4f139a8cbf22fdb0ab 249 Gene3D G3DSA:3.40.1010.10 1 107 2.5E-27 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TDE_0614 9cdab51ff7795b4f139a8cbf22fdb0ab 249 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 205 1.6E-45 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TDE_0614 9cdab51ff7795b4f139a8cbf22fdb0ab 249 Gene3D G3DSA:3.30.950.10 108 227 3.8E-48 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TDE_1435 f139e60d03104810cdfd81d426527739 386 Gene3D G3DSA:3.40.50.12580 185 363 3.2E-10 T 12-10-2018 TDE_1435 f139e60d03104810cdfd81d426527739 386 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 170 308 3.1E-12 T 12-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 TDE_2020 bdaff79225c13555da7e56ed9401a601 1140 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 208 232 0.0013 T 12-10-2018 IPR006530 YD repeat TDE_2020 bdaff79225c13555da7e56ed9401a601 1140 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 836 941 4.0E-17 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 TDE_2020 bdaff79225c13555da7e56ed9401a601 1140 Gene3D G3DSA:2.180.10.10 629 941 6.8E-49 T 12-10-2018 TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 PIRSF PIRSF001217 10 608 7.6E-193 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 19 574 2.9E-158 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 Pfam PF01343 Peptidase family S49 391 542 2.1E-42 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 Pfam PF01343 Peptidase family S49 138 286 7.1E-26 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 Gene3D G3DSA:3.90.226.10 95 314 2.2E-132 T 12-10-2018 TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 Gene3D G3DSA:3.40.1750.10 186 498 2.2E-132 T 12-10-2018 TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 SUPERFAMILY SSF52096 32 285 4.72E-20 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 325 540 7.0E-53 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 Gene3D G3DSA:3.90.226.10 315 541 2.2E-132 T 12-10-2018 TDE_0306 80f77eb099f1d520842d60d6d5c686d0 609 SUPERFAMILY SSF52096 321 531 9.95E-41 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_0091 5c1a4b00d00fe47870821412b1e062c7 180 SUPERFAMILY SSF88946 11 91 3.14E-13 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TDE_0091 5c1a4b00d00fe47870821412b1e062c7 180 Gene3D G3DSA:1.10.10.10 112 172 8.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0091 5c1a4b00d00fe47870821412b1e062c7 180 Pfam PF04542 Sigma-70 region 2 19 84 7.4E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TDE_0091 5c1a4b00d00fe47870821412b1e062c7 180 Pfam PF08281 Sigma-70, region 4 117 168 9.3E-15 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TDE_0091 5c1a4b00d00fe47870821412b1e062c7 180 SUPERFAMILY SSF88659 109 173 5.23E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_0091 5c1a4b00d00fe47870821412b1e062c7 180 Gene3D G3DSA:1.10.1740.10 7 111 1.1E-11 T 12-10-2018 TDE_0091 5c1a4b00d00fe47870821412b1e062c7 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 171 3.4E-26 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 Gene3D G3DSA:3.90.960.10 240 410 2.7E-231 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 Gene3D G3DSA:3.40.50.800 3 570 2.7E-231 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 Pfam PF03129 Anticodon binding domain 496 584 3.1E-15 T 12-10-2018 IPR004154 Anticodon-binding TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 Gene3D G3DSA:3.30.930.10 11 486 2.7E-231 T 12-10-2018 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 Pfam PF04073 Aminoacyl-tRNA editing domain 262 392 2.1E-23 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 588 38.334 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 480 3.4E-42 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 585 6.0E-189 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 SUPERFAMILY SSF52954 485 589 4.83E-26 T 12-10-2018 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 SUPERFAMILY SSF55826 220 410 4.19E-26 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 SUPERFAMILY SSF55681 10 499 7.21E-94 T 12-10-2018 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 5.0E-15 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 5.0E-15 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 5.0E-15 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TDE_2220 3a2eb0abf3d66ef1f27cdef4960f4a99 595 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 5.0E-15 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TDE_2246 0566cac58d3c6f053eb1c701fe49016a 80 SUPERFAMILY SSF89447 1 71 9.94E-12 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily TDE_2246 0566cac58d3c6f053eb1c701fe49016a 80 SMART SM00966 6 49 2.6E-5 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_2246 0566cac58d3c6f053eb1c701fe49016a 80 Gene3D G3DSA:2.10.260.10 2 78 9.2E-9 T 12-10-2018 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 SUPERFAMILY SSF54211 2 198 7.29E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_2298 8383b77dc5963cc17e34b0395970f862 384 PRINTS PR00473 Galactokinase signature 87 98 4.1E-8 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 PRINTS PR00473 Galactokinase signature 24 42 4.1E-8 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 PRINTS PR00473 Galactokinase signature 262 276 4.1E-8 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 PRINTS PR00473 Galactokinase signature 107 125 4.1E-8 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 PIRSF PIRSF000530 1 384 1.6E-82 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 Gene3D G3DSA:3.30.70.890 197 359 1.3E-75 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TDE_2298 8383b77dc5963cc17e34b0395970f862 384 Pfam PF10509 Galactokinase galactose-binding signature 8 54 4.2E-12 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 Gene3D G3DSA:3.30.230.10 18 196 1.3E-75 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_2298 8383b77dc5963cc17e34b0395970f862 384 Pfam PF08544 GHMP kinases C terminal 278 358 1.1E-5 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain TDE_2298 8383b77dc5963cc17e34b0395970f862 384 PRINTS PR00959 Mevalonate kinase family signature 22 46 6.3E-18 T 12-10-2018 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 PRINTS PR00959 Mevalonate kinase family signature 114 136 6.3E-18 T 12-10-2018 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 PRINTS PR00959 Mevalonate kinase family signature 331 348 6.3E-18 T 12-10-2018 TDE_2298 8383b77dc5963cc17e34b0395970f862 384 SUPERFAMILY SSF55060 201 379 7.67E-31 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TDE_1826 1a4a1f596ba0a3aa521c80656781e644 406 Pfam PF01841 Transglutaminase-like superfamily 210 290 4.1E-6 T 12-10-2018 IPR002931 Transglutaminase-like TDE_1826 1a4a1f596ba0a3aa521c80656781e644 406 SUPERFAMILY SSF54001 183 292 5.07E-8 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TDE_1826 1a4a1f596ba0a3aa521c80656781e644 406 Gene3D G3DSA:3.10.620.30 142 305 4.6E-11 T 12-10-2018 TDE_2742 f04c822ed24b6c269a1e1383056b0c98 269 SUPERFAMILY SSF56349 7 263 8.54E-43 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TDE_2742 f04c822ed24b6c269a1e1383056b0c98 269 Gene3D G3DSA:1.10.443.10 87 268 1.3E-34 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TDE_2742 f04c822ed24b6c269a1e1383056b0c98 269 Gene3D G3DSA:1.10.150.130 3 83 5.4E-10 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal TDE_2742 f04c822ed24b6c269a1e1383056b0c98 269 Pfam PF00589 Phage integrase family 117 255 5.8E-24 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TDE_0906 2c4498476f88343a01189d8470f404c5 491 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0906 2c4498476f88343a01189d8470f404c5 491 Gene3D G3DSA:3.40.50.300 263 486 2.2E-55 T 12-10-2018 TDE_0906 2c4498476f88343a01189d8470f404c5 491 SUPERFAMILY SSF52540 2 224 2.2E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0906 2c4498476f88343a01189d8470f404c5 491 Pfam PF00005 ABC transporter 20 169 1.0E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0906 2c4498476f88343a01189d8470f404c5 491 SUPERFAMILY SSF52540 266 476 1.44E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0906 2c4498476f88343a01189d8470f404c5 491 Pfam PF00005 ABC transporter 283 422 2.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0906 2c4498476f88343a01189d8470f404c5 491 Gene3D G3DSA:3.40.50.300 1 243 2.5E-60 T 12-10-2018 TDE_0906 2c4498476f88343a01189d8470f404c5 491 SMART SM00382 28 207 5.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0906 2c4498476f88343a01189d8470f404c5 491 SMART SM00382 292 472 1.0E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1514 3b67eb4527c8c703fbc8078c09096ab2 425 Pfam PF02687 FtsX-like permease family 329 409 1.0E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TDE_1514 3b67eb4527c8c703fbc8078c09096ab2 425 Pfam PF12704 MacB-like periplasmic core domain 19 231 2.6E-7 T 12-10-2018 IPR025857 MacB-like periplasmic core domain TDE_0058 616e780c74abb5f32115b790a656e5b1 110 Pfam PF06445 GyrI-like small molecule binding domain 4 107 5.1E-19 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain TDE_0058 616e780c74abb5f32115b790a656e5b1 110 Gene3D G3DSA:3.20.80.10 2 109 5.0E-30 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TDE_0058 616e780c74abb5f32115b790a656e5b1 110 SUPERFAMILY SSF55136 3 109 5.76E-24 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TDE_0058 616e780c74abb5f32115b790a656e5b1 110 SMART SM00871 1 108 8.9E-6 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding TDE_1995 5d01962c14094141507bb720f0d3d85a 566 Gene3D G3DSA:3.30.230.10 4 186 4.5E-14 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_1995 5d01962c14094141507bb720f0d3d85a 566 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 4 554 2.2E-143 T 12-10-2018 IPR004482 Mg chelatase-related protein TDE_1995 5d01962c14094141507bb720f0d3d85a 566 Gene3D G3DSA:3.40.50.300 235 561 3.3E-44 T 12-10-2018 TDE_1995 5d01962c14094141507bb720f0d3d85a 566 Pfam PF13541 Subunit ChlI of Mg-chelatase 18 157 7.7E-39 T 12-10-2018 TDE_1995 5d01962c14094141507bb720f0d3d85a 566 SUPERFAMILY SSF52540 237 557 1.33E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1995 5d01962c14094141507bb720f0d3d85a 566 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 454 556 1.4E-19 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain TDE_1995 5d01962c14094141507bb720f0d3d85a 566 SUPERFAMILY SSF54211 4 183 4.55E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_1995 5d01962c14094141507bb720f0d3d85a 566 Pfam PF01078 Magnesium chelatase, subunit ChlI 238 443 1.3E-74 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 Gene3D G3DSA:1.10.220.30 217 355 1.4E-25 T 12-10-2018 TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 Gene3D G3DSA:1.10.220.30 25 101 2.6E-10 T 12-10-2018 TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 Pfam PF14841 FliG middle domain 137 208 2.4E-18 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 Pfam PF01706 FliG C-terminal domain 239 345 1.9E-22 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 SUPERFAMILY SSF48029 27 142 6.54E-14 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 Gene3D G3DSA:1.10.220.30 108 212 6.1E-22 T 12-10-2018 TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 SUPERFAMILY SSF48029 135 345 5.49E-40 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 Pfam PF14842 FliG N-terminal domain 28 127 2.1E-21 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 PRINTS PR00954 Flagellar motor switch protein FliG signature 134 157 1.1E-32 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 1.1E-32 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 PRINTS PR00954 Flagellar motor switch protein FliG signature 55 81 1.1E-32 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 PRINTS PR00954 Flagellar motor switch protein FliG signature 216 241 1.1E-32 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 PRINTS PR00954 Flagellar motor switch protein FliG signature 293 319 1.1E-32 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 PRINTS PR00954 Flagellar motor switch protein FliG signature 269 289 1.1E-32 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1285 a2148e049a572b4dbd5c91c1b2e2e646 355 PRINTS PR00954 Flagellar motor switch protein FliG signature 26 42 1.1E-32 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_2186 c11c44f7c40ec88ee272832f3b4bb84a 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 530 1.1E-6 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TDE_2186 c11c44f7c40ec88ee272832f3b4bb84a 551 Pfam PF00501 AMP-binding enzyme 19 432 1.8E-93 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TDE_2186 c11c44f7c40ec88ee272832f3b4bb84a 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 12-10-2018 IPR020845 AMP-binding, conserved site TDE_2186 c11c44f7c40ec88ee272832f3b4bb84a 551 SUPERFAMILY SSF56801 10 535 6.15E-114 T 12-10-2018 TDE_2186 c11c44f7c40ec88ee272832f3b4bb84a 551 Gene3D G3DSA:3.30.300.30 435 546 2.4E-12 T 12-10-2018 TDE_2614 0563fa5fb5f9dabb69e7cc1154da6fad 371 SUPERFAMILY SSF143631 28 325 1.86E-81 T 12-10-2018 IPR003374 ApbE-like superfamily TDE_2614 0563fa5fb5f9dabb69e7cc1154da6fad 371 Pfam PF02424 ApbE family 36 324 1.1E-79 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TDE_2614 0563fa5fb5f9dabb69e7cc1154da6fad 371 Gene3D G3DSA:3.10.520.20 21 369 1.3E-99 T 12-10-2018 TDE_2614 0563fa5fb5f9dabb69e7cc1154da6fad 371 PIRSF PIRSF006268 1 365 4.9E-128 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 SMART SM00382 286 462 2.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 SMART SM00382 28 224 0.25 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 Gene3D G3DSA:3.40.50.300 268 474 4.9E-50 T 12-10-2018 TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 Gene3D G3DSA:3.40.50.300 1 254 2.8E-54 T 12-10-2018 TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 SUPERFAMILY SSF52540 2 233 5.67E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 SUPERFAMILY SSF52540 266 466 9.94E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 Pfam PF00005 ABC transporter 277 414 1.2E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 Pfam PF00005 ABC transporter 19 170 5.2E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0900 ac2e6497e5a76d4f590944bbbb35c4c1 474 ProSitePatterns PS00211 ABC transporters family signature. 386 400 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1076 5e0b8db7a3a35cd0dfa171b4960b0aad 346 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 338 4.3E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1076 5e0b8db7a3a35cd0dfa171b4960b0aad 346 Gene3D G3DSA:3.40.50.300 13 346 3.7E-92 T 12-10-2018 TDE_1076 5e0b8db7a3a35cd0dfa171b4960b0aad 346 SUPERFAMILY SSF52540 16 271 2.49E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1076 5e0b8db7a3a35cd0dfa171b4960b0aad 346 Pfam PF00005 ABC transporter 46 199 5.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1076 5e0b8db7a3a35cd0dfa171b4960b0aad 346 SMART SM00382 54 257 2.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1076 5e0b8db7a3a35cd0dfa171b4960b0aad 346 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 251 318 7.5E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0735 70f8768443aa301a5ecde24dd7ead154 85 Gene3D G3DSA:3.30.2310.20 1 85 1.5E-29 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0735 70f8768443aa301a5ecde24dd7ead154 85 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 84 7.1E-20 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TDE_0735 70f8768443aa301a5ecde24dd7ead154 85 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 84 3.8E-16 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TDE_0735 70f8768443aa301a5ecde24dd7ead154 85 SUPERFAMILY SSF143011 1 82 5.23E-24 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_2776 375823927b58861f97ae159ef2a5d96e 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 10 308 6.1E-115 T 12-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 TDE_2776 375823927b58861f97ae159ef2a5d96e 313 Pfam PF00561 alpha/beta hydrolase fold 35 293 1.3E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TDE_2776 375823927b58861f97ae159ef2a5d96e 313 Gene3D G3DSA:3.40.50.1820 1 311 5.7E-86 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2776 375823927b58861f97ae159ef2a5d96e 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 2.5E-13 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TDE_2776 375823927b58861f97ae159ef2a5d96e 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 2.5E-13 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TDE_2776 375823927b58861f97ae159ef2a5d96e 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 2.5E-13 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TDE_2776 375823927b58861f97ae159ef2a5d96e 313 PIRSF PIRSF006431 1 313 2.5E-132 T 12-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 TDE_2776 375823927b58861f97ae159ef2a5d96e 313 SUPERFAMILY SSF53474 9 294 2.32E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0838 d502fc09b89d27c998642271cfadecbf 480 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 104 1.8E-30 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain TDE_0838 d502fc09b89d27c998642271cfadecbf 480 SUPERFAMILY SSF142019 94 301 7.59E-54 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TDE_0838 d502fc09b89d27c998642271cfadecbf 480 SUPERFAMILY SSF46548 332 444 3.01E-15 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_0838 d502fc09b89d27c998642271cfadecbf 480 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 413 424 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_0838 d502fc09b89d27c998642271cfadecbf 480 SUPERFAMILY SSF51230 21 109 6.41E-5 T 12-10-2018 IPR011053 Single hybrid motif TDE_0838 d502fc09b89d27c998642271cfadecbf 480 Gene3D G3DSA:3.40.50.11540 132 290 1.1E-17 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TDE_0838 d502fc09b89d27c998642271cfadecbf 480 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 5 443 6.5E-132 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 TDE_0838 d502fc09b89d27c998642271cfadecbf 480 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 480 127.449 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 TDE_0838 d502fc09b89d27c998642271cfadecbf 480 Gene3D G3DSA:3.30.70.20 346 455 1.5E-6 T 12-10-2018 TDE_0838 d502fc09b89d27c998642271cfadecbf 480 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 127 281 2.0E-49 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TDE_2371 dec2a9bd34885bbd4d3efab22c8923a1 277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 243 254 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_2371 dec2a9bd34885bbd4d3efab22c8923a1 277 SUPERFAMILY SSF54862 65 265 4.19E-23 T 12-10-2018 TDE_2371 dec2a9bd34885bbd4d3efab22c8923a1 277 Pfam PF12801 4Fe-4S binding domain 60 101 1.1E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_2371 dec2a9bd34885bbd4d3efab22c8923a1 277 Pfam PF12801 4Fe-4S binding domain 128 150 3.6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_2371 dec2a9bd34885bbd4d3efab22c8923a1 277 Pfam PF12801 4Fe-4S binding domain 41 52 75.0 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_2371 dec2a9bd34885bbd4d3efab22c8923a1 277 Pfam PF12801 4Fe-4S binding domain 176 207 2.0E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_2371 dec2a9bd34885bbd4d3efab22c8923a1 277 Pfam PF00037 4Fe-4S binding domain 242 259 9.7E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_2371 dec2a9bd34885bbd4d3efab22c8923a1 277 Gene3D G3DSA:3.30.70.20 189 237 2.7E-6 T 12-10-2018 TDE_2371 dec2a9bd34885bbd4d3efab22c8923a1 277 Gene3D G3DSA:3.30.70.20 238 277 3.8E-5 T 12-10-2018 TDE_1352 acbac8c771efb4cdf652193079d75abb 617 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 568 5.8E-64 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TDE_1352 acbac8c771efb4cdf652193079d75abb 617 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 11 592 5.0E-192 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TDE_1352 acbac8c771efb4cdf652193079d75abb 617 Gene3D G3DSA:3.40.710.10 239 599 1.2E-94 T 12-10-2018 TDE_1352 acbac8c771efb4cdf652193079d75abb 617 SUPERFAMILY SSF56519 51 243 2.09E-43 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TDE_1352 acbac8c771efb4cdf652193079d75abb 617 SUPERFAMILY SSF56601 244 585 1.54E-82 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TDE_1352 acbac8c771efb4cdf652193079d75abb 617 Gene3D G3DSA:3.90.1310.10 55 237 9.9E-41 T 12-10-2018 TDE_1352 acbac8c771efb4cdf652193079d75abb 617 Gene3D G3DSA:3.30.1390.30 77 153 9.9E-41 T 12-10-2018 TDE_1352 acbac8c771efb4cdf652193079d75abb 617 Pfam PF03717 Penicillin-binding Protein dimerisation domain 55 227 5.8E-45 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 Gene3D G3DSA:3.40.630.10 4 395 5.2E-170 T 12-10-2018 TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 400 1.3E-162 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 Gene3D G3DSA:3.30.70.360 205 314 5.2E-170 T 12-10-2018 TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 SUPERFAMILY SSF53187 2 400 1.94E-74 T 12-10-2018 TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 Hamap MF_00550 Peptidase T [pepT]. 1 399 52.437 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 SUPERFAMILY SSF55031 205 315 1.26E-35 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 Pfam PF01546 Peptidase family M20/M25/M40 135 397 4.5E-11 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 134 173 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 Pfam PF07687 Peptidase dimerisation domain 202 303 5.3E-9 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TDE_0925 0f7e0fed0b0043450a51acb845a536cb 401 PIRSF PIRSF037215 1 401 8.8E-183 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 TDE_1415 966419c7c9a7bc0e9322e5a7059542ce 616 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 251 616 113.186 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 TDE_1415 966419c7c9a7bc0e9322e5a7059542ce 616 Gene3D G3DSA:3.40.640.10 261 510 1.1E-97 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_1415 966419c7c9a7bc0e9322e5a7059542ce 616 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 251 608 6.5E-112 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 TDE_1415 966419c7c9a7bc0e9322e5a7059542ce 616 SUPERFAMILY SSF53383 251 612 6.48E-72 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_1415 966419c7c9a7bc0e9322e5a7059542ce 616 Pfam PF12804 MobA-like NTP transferase domain 5 108 3.7E-10 T 12-10-2018 IPR025877 MobA-like NTP transferase TDE_1415 966419c7c9a7bc0e9322e5a7059542ce 616 Gene3D G3DSA:3.90.1150.10 252 608 1.1E-97 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_1415 966419c7c9a7bc0e9322e5a7059542ce 616 Gene3D G3DSA:3.90.550.10 3 234 4.0E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1415 966419c7c9a7bc0e9322e5a7059542ce 616 SUPERFAMILY SSF53448 1 268 4.8E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1415 966419c7c9a7bc0e9322e5a7059542ce 616 Pfam PF00266 Aminotransferase class-V 307 547 2.8E-24 T 12-10-2018 IPR000192 Aminotransferase class V domain TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Gene3D G3DSA:3.90.1110.10 154 274 2.6E-20 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Pfam PF04563 RNA polymerase beta subunit 25 456 3.7E-27 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 11 1143 12.011 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Pfam PF10385 RNA polymerase beta subunit external 1 domain 549 614 5.1E-18 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 11 892 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Gene3D G3DSA:2.40.50.100 672 750 1.1E-27 T 12-10-2018 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Pfam PF04565 RNA polymerase Rpb2, domain 3 471 539 2.0E-29 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Pfam PF04561 RNA polymerase Rpb2, domain 2 313 412 1.3E-16 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Gene3D G3DSA:3.90.1100.10 600 671 1.0E-20 T 12-10-2018 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Pfam PF00562 RNA polymerase Rpb2, domain 6 676 1065 2.9E-155 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Gene3D G3DSA:3.90.1800.10 1053 1136 2.0E-9 T 12-10-2018 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Gene3D G3DSA:2.40.270.10 977 1043 1.6E-17 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Pfam PF04560 RNA polymerase Rpb2, domain 7 1067 1141 8.2E-24 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Gene3D G3DSA:3.90.1100.10 17 153 9.2E-48 T 12-10-2018 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Gene3D G3DSA:2.40.50.150 782 926 3.9E-57 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 SUPERFAMILY SSF64484 17 1148 0.0 T 12-10-2018 TDE_2421 d47a0508fc2ede976a181fd82dee8a9d 1167 Gene3D G3DSA:3.90.1100.10 374 583 4.2E-70 T 12-10-2018 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Pfam PF00515 Tetratricopeptide repeat 303 330 3.8E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Pfam PF14559 Tetratricopeptide repeat 106 159 1.2E-8 T 12-10-2018 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SUPERFAMILY SSF48452 263 390 3.34E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Gene3D G3DSA:1.25.40.10 51 162 5.9E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Gene3D G3DSA:1.25.40.10 163 228 4.8E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Pfam PF13432 Tetratricopeptide repeat 169 220 2.1E-5 T 12-10-2018 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Gene3D G3DSA:1.25.40.10 230 331 8.7E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Gene3D G3DSA:1.25.40.10 332 414 9.6E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Pfam PF13181 Tetratricopeptide repeat 269 299 0.16 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Pfam PF13181 Tetratricopeptide repeat 369 392 0.097 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 Pfam PF13181 Tetratricopeptide repeat 233 265 0.013 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SUPERFAMILY SSF81901 66 301 6.02E-39 T 12-10-2018 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SMART SM00028 300 333 0.2 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SMART SM00028 60 93 2.1 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SMART SM00028 232 265 2.2E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SMART SM00028 128 161 4.7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SMART SM00028 162 195 4.5E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SMART SM00028 266 299 0.031 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SMART SM00028 196 229 1.9 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SMART SM00028 94 127 6.5E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2073 97cfa134fce65c46ad4b1332626511fe 417 SMART SM00028 369 402 96.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1419 20f0cee771a985804b4e2a8b0b0f8747 345 Gene3D G3DSA:3.90.550.10 1 221 1.6E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1419 20f0cee771a985804b4e2a8b0b0f8747 345 Pfam PF00535 Glycosyl transferase family 2 6 125 2.9E-21 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TDE_1419 20f0cee771a985804b4e2a8b0b0f8747 345 SUPERFAMILY SSF53448 3 242 6.19E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_2609 e486f82f3202c86365685da86e83d7dc 467 SMART SM00729 143 376 6.7E-36 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_2609 e486f82f3202c86365685da86e83d7dc 467 Pfam PF00919 Uncharacterized protein family UPF0004 4 94 2.5E-23 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TDE_2609 e486f82f3202c86365685da86e83d7dc 467 Gene3D G3DSA:3.40.50.12160 1 124 8.6E-31 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TDE_2609 e486f82f3202c86365685da86e83d7dc 467 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 462 8.9E-109 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 TDE_2609 e486f82f3202c86365685da86e83d7dc 467 Pfam PF04055 Radical SAM superfamily 147 336 9.2E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_2609 e486f82f3202c86365685da86e83d7dc 467 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 9.9E-104 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TDE_2609 e486f82f3202c86365685da86e83d7dc 467 Gene3D G3DSA:2.40.50.140 393 467 6.0E-9 T 12-10-2018 TDE_2609 e486f82f3202c86365685da86e83d7dc 467 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 1 466 55.584 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 TDE_2609 e486f82f3202c86365685da86e83d7dc 467 Gene3D G3DSA:3.80.30.20 142 392 1.2E-72 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TDE_2609 e486f82f3202c86365685da86e83d7dc 467 SUPERFAMILY SSF102114 140 382 1.96E-46 T 12-10-2018 TDE_2609 e486f82f3202c86365685da86e83d7dc 467 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 ProSitePatterns PS00452 Guanylate cyclase signature. 947 970 - T 12-10-2018 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site GO:0009190|GO:0016849|GO:0035556 TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 839 1014 5.5E-44 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Pfam PF07495 Y_Y_Y domain 693 753 6.8E-17 T 12-10-2018 IPR011123 Two component regulator three Y TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Pfam PF07494 Two component regulator propeller 125 148 0.0045 T 12-10-2018 IPR011110 Two component regulator propeller TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Pfam PF07494 Two component regulator propeller 291 313 8.6E-5 T 12-10-2018 IPR011110 Two component regulator propeller TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Pfam PF07494 Two component regulator propeller 517 539 0.0013 T 12-10-2018 IPR011110 Two component regulator propeller TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Pfam PF07494 Two component regulator propeller 465 488 0.015 T 12-10-2018 IPR011110 Two component regulator propeller TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Pfam PF07494 Two component regulator propeller 41 64 0.0028 T 12-10-2018 IPR011110 Two component regulator propeller TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Gene3D G3DSA:2.60.40.10 648 768 3.9E-28 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 SMART SM00044 808 996 7.2E-48 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 SUPERFAMILY SSF63829 27 187 3.33E-10 T 12-10-2018 TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Gene3D G3DSA:3.30.70.1230 830 1017 9.5E-51 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 SUPERFAMILY SSF55073 842 1013 6.59E-47 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Gene3D G3DSA:2.130.10.10 33 321 8.4E-49 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Gene3D G3DSA:2.130.10.10 322 493 2.0E-19 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 SUPERFAMILY SSF63829 218 494 1.44E-15 T 12-10-2018 TDE_0156 881773f986a9a8daf920a6aa9a21a7d7 1075 Gene3D G3DSA:2.130.10.10 501 645 5.0E-17 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TDE_2524 267d4a50a269a8956495c48bead00985 423 SUPERFAMILY SSF52540 175 413 1.52E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2524 267d4a50a269a8956495c48bead00985 423 SMART SM00382 201 397 9.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2524 267d4a50a269a8956495c48bead00985 423 Pfam PF00005 ABC transporter 192 342 1.6E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2524 267d4a50a269a8956495c48bead00985 423 Gene3D G3DSA:3.40.50.300 165 416 1.7E-67 T 12-10-2018 TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 17 166 3.4E-37 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 Gene3D G3DSA:3.30.420.10 16 170 1.3E-48 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 121 140 5.1E-31 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 75 91 5.1E-31 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 97 113 5.1E-31 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 153 165 5.1E-31 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 18 31 5.1E-31 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 17 164 1.2E-49 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 SUPERFAMILY SSF53098 16 169 3.79E-42 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_1864 292687b3aa3334d71ea3748e0e260e31 178 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 15 168 40.961 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TDE_1068 0c0c55c44f7cc687bd7ebc5f3602029c 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 302 7.4E-15 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1068 0c0c55c44f7cc687bd7ebc5f3602029c 330 Pfam PF00005 ABC transporter 26 183 6.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1068 0c0c55c44f7cc687bd7ebc5f3602029c 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 321 6.7E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1068 0c0c55c44f7cc687bd7ebc5f3602029c 330 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1068 0c0c55c44f7cc687bd7ebc5f3602029c 330 SMART SM00382 34 233 2.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1068 0c0c55c44f7cc687bd7ebc5f3602029c 330 SUPERFAMILY SSF52540 5 247 3.67E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1068 0c0c55c44f7cc687bd7ebc5f3602029c 330 Gene3D G3DSA:3.40.50.300 3 328 1.5E-96 T 12-10-2018 TDE_1464 67d6ed3d9d7d71a02c7787d68453ba49 154 Pfam PF01668 SmpB protein 9 150 5.1E-60 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 TDE_1464 67d6ed3d9d7d71a02c7787d68453ba49 154 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site TDE_1464 67d6ed3d9d7d71a02c7787d68453ba49 154 SUPERFAMILY SSF74982 3 132 1.57E-50 T 12-10-2018 IPR023620 Small protein B TDE_1464 67d6ed3d9d7d71a02c7787d68453ba49 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 154 68.047 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 TDE_1464 67d6ed3d9d7d71a02c7787d68453ba49 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 8 150 9.4E-60 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 TDE_1464 67d6ed3d9d7d71a02c7787d68453ba49 154 Gene3D G3DSA:2.40.280.10 2 129 4.6E-50 T 12-10-2018 IPR023620 Small protein B TDE_1464 67d6ed3d9d7d71a02c7787d68453ba49 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 116 6.0E-57 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 TDE_2277 029892cb1b7834d99df580bbe3bcfa5c 251 Gene3D G3DSA:3.40.50.1220 17 235 4.2E-75 T 12-10-2018 TDE_2277 029892cb1b7834d99df580bbe3bcfa5c 251 Pfam PF02146 Sir2 family 26 201 1.0E-49 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 TDE_2277 029892cb1b7834d99df580bbe3bcfa5c 251 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 10 245 60.598 T 12-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 TDE_2277 029892cb1b7834d99df580bbe3bcfa5c 251 SUPERFAMILY SSF52467 5 248 3.04E-77 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TDE_2277 029892cb1b7834d99df580bbe3bcfa5c 251 Gene3D G3DSA:3.30.1600.10 35 171 4.2E-75 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily TDE_1652 d532b2d00a18428d03875c72ecdcc6ac 555 Pfam PF00005 ABC transporter 362 511 9.5E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1652 d532b2d00a18428d03875c72ecdcc6ac 555 SUPERFAMILY SSF52540 341 553 9.35E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1652 d532b2d00a18428d03875c72ecdcc6ac 555 Gene3D G3DSA:3.40.50.300 329 554 1.7E-38 T 12-10-2018 TDE_1652 d532b2d00a18428d03875c72ecdcc6ac 555 SUPERFAMILY SSF90123 14 320 2.49E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1652 d532b2d00a18428d03875c72ecdcc6ac 555 Pfam PF00664 ABC transporter transmembrane region 25 292 3.9E-15 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_1652 d532b2d00a18428d03875c72ecdcc6ac 555 Gene3D G3DSA:1.20.1560.10 2 328 1.8E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0737 599df8327b9c139313e250af2844808c 88 SUPERFAMILY SSF143011 1 85 8.24E-20 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0737 599df8327b9c139313e250af2844808c 88 Gene3D G3DSA:3.30.2310.20 1 86 8.9E-30 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0737 599df8327b9c139313e250af2844808c 88 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 86 5.7E-27 T 12-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TDE_0737 599df8327b9c139313e250af2844808c 88 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 86 5.1E-24 T 12-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TDE_0068 a6c1d6c67da8e69d1cc6ba0e1d6ba75f 411 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 25 400 3.1E-78 T 12-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase TDE_0068 a6c1d6c67da8e69d1cc6ba0e1d6ba75f 411 Gene3D G3DSA:3.30.70.360 205 327 1.8E-71 T 12-10-2018 TDE_0068 a6c1d6c67da8e69d1cc6ba0e1d6ba75f 411 Pfam PF07687 Peptidase dimerisation domain 202 312 2.1E-17 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain TDE_0068 a6c1d6c67da8e69d1cc6ba0e1d6ba75f 411 SUPERFAMILY SSF55031 207 320 9.12E-20 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TDE_0068 a6c1d6c67da8e69d1cc6ba0e1d6ba75f 411 Gene3D G3DSA:3.40.630.10 25 394 1.8E-71 T 12-10-2018 TDE_0068 a6c1d6c67da8e69d1cc6ba0e1d6ba75f 411 SUPERFAMILY SSF53187 4 406 2.25E-54 T 12-10-2018 TDE_0068 a6c1d6c67da8e69d1cc6ba0e1d6ba75f 411 Pfam PF01546 Peptidase family M20/M25/M40 92 405 9.5E-30 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 59 1.2E-15 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 31.41 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 Pfam PF01467 Cytidylyltransferase-like 5 133 6.4E-19 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 SUPERFAMILY SSF52374 1 156 9.07E-43 T 12-10-2018 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.6E-34 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.6E-34 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.6E-34 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.6E-34 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.6E-34 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 Gene3D G3DSA:3.40.50.620 2 159 9.9E-53 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1375 83acc1a92fc90cf9dbe896a1993426f0 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 4.8E-57 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TDE_1350 0261dbf1ebacfad8cfa161b3ff050d2a 287 Gene3D G3DSA:2.40.10.340 121 277 4.3E-36 T 12-10-2018 TDE_1350 0261dbf1ebacfad8cfa161b3ff050d2a 287 Pfam PF04085 rod shape-determining protein MreC 123 278 5.9E-36 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TDE_1350 0261dbf1ebacfad8cfa161b3ff050d2a 287 Gene3D G3DSA:2.40.10.350 184 266 4.3E-36 T 12-10-2018 TDE_1350 0261dbf1ebacfad8cfa161b3ff050d2a 287 PIRSF PIRSF038471 1 287 8.5E-44 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TDE_1350 0261dbf1ebacfad8cfa161b3ff050d2a 287 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 13 280 6.1E-42 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 SMART SM01383 42 118 3.7E-45 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 SMART SM01382 124 251 1.0E-84 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 SUPERFAMILY SSF50104 128 269 6.62E-58 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 Gene3D G3DSA:2.30.30.30 118 196 2.0E-29 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.107 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 9.5E-129 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 Gene3D G3DSA:4.10.950.10 197 274 1.6E-36 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.9E-32 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 Gene3D G3DSA:2.40.50.140 1 114 2.7E-45 T 12-10-2018 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 4.9E-54 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 SUPERFAMILY SSF50249 2 123 3.08E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_0770 ef7ab9c3c7d9d4741350b3707cfd588b 276 PIRSF PIRSF002158 5 274 1.5E-97 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1211 98bf7b863a812babb41add507ee745fd 485 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 5 485 40.881 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TDE_1211 98bf7b863a812babb41add507ee745fd 485 Gene3D G3DSA:1.10.8.10 263 288 1.0E-24 T 12-10-2018 TDE_1211 98bf7b863a812babb41add507ee745fd 485 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 8 485 1.1E-186 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TDE_1211 98bf7b863a812babb41add507ee745fd 485 Pfam PF07724 AAA domain (Cdc48 subfamily) 232 370 1.3E-39 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_1211 98bf7b863a812babb41add507ee745fd 485 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 57 105 1.6E-5 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_1211 98bf7b863a812babb41add507ee745fd 485 Gene3D G3DSA:1.10.8.60 377 482 9.1E-38 T 12-10-2018 TDE_1211 98bf7b863a812babb41add507ee745fd 485 SMART SM01086 377 473 3.0E-18 T 12-10-2018 IPR019489 Clp ATPase, C-terminal TDE_1211 98bf7b863a812babb41add507ee745fd 485 Gene3D G3DSA:3.40.50.300 255 352 1.0E-24 T 12-10-2018 TDE_1211 98bf7b863a812babb41add507ee745fd 485 Gene3D G3DSA:3.40.50.300 6 136 1.1E-32 T 12-10-2018 TDE_1211 98bf7b863a812babb41add507ee745fd 485 SUPERFAMILY SSF52540 8 483 2.48E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1211 98bf7b863a812babb41add507ee745fd 485 SMART SM00382 53 374 2.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2000 3904482e382f6fd52a73301e9295d114 566 Gene3D G3DSA:3.40.50.300 319 565 2.9E-74 T 12-10-2018 TDE_2000 3904482e382f6fd52a73301e9295d114 566 Gene3D G3DSA:1.20.1560.10 101 313 4.9E-9 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2000 3904482e382f6fd52a73301e9295d114 566 Pfam PF00005 ABC transporter 343 492 5.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2000 3904482e382f6fd52a73301e9295d114 566 SUPERFAMILY SSF52540 321 562 6.92E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2000 3904482e382f6fd52a73301e9295d114 566 SMART SM00382 352 538 1.8E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2000 3904482e382f6fd52a73301e9295d114 566 SUPERFAMILY SSF90123 3 292 1.06E-14 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2000 3904482e382f6fd52a73301e9295d114 566 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0102 5b6bb2ef640287dcd3987ddbc75ebb81 430 SUPERFAMILY SSF55874 175 295 1.19E-5 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0102 5b6bb2ef640287dcd3987ddbc75ebb81 430 Pfam PF00027 Cyclic nucleotide-binding domain 315 397 7.8E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_0102 5b6bb2ef640287dcd3987ddbc75ebb81 430 SMART SM00100 296 412 1.0E-5 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_0102 5b6bb2ef640287dcd3987ddbc75ebb81 430 SUPERFAMILY SSF51206 306 412 4.98E-21 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_0102 5b6bb2ef640287dcd3987ddbc75ebb81 430 Gene3D G3DSA:3.30.565.10 153 299 8.5E-7 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0102 5b6bb2ef640287dcd3987ddbc75ebb81 430 Gene3D G3DSA:2.60.120.10 300 424 2.8E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_0102 5b6bb2ef640287dcd3987ddbc75ebb81 430 Pfam PF13581 Histidine kinase-like ATPase domain 167 292 1.4E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 SUPERFAMILY SSF109998 258 449 3.73E-35 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 SUPERFAMILY SSF54534 139 256 2.36E-20 T 12-10-2018 TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 PIRSF PIRSF003095 3 451 1.5E-106 T 12-10-2018 IPR005215 Trigger factor GO:0015031 TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 TIGRFAM TIGR00115 tig: trigger factor 14 431 3.1E-111 T 12-10-2018 IPR005215 Trigger factor GO:0015031 TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 Gene3D G3DSA:3.10.50.40 157 256 3.2E-68 T 12-10-2018 TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 Gene3D G3DSA:3.30.70.1050 2 122 1.2E-28 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 Gene3D G3DSA:1.10.3120.10 123 436 3.2E-68 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 SUPERFAMILY SSF102735 6 136 2.75E-27 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 Hamap MF_00303 Trigger factor [tig]. 3 438 18.504 T 12-10-2018 IPR005215 Trigger factor GO:0015031 TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 166 236 1.3E-4 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 273 432 3.3E-28 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 TDE_1671 fdb2fdd95279de513144a00b0a2d14e7 451 Pfam PF05697 Bacterial trigger factor protein (TF) 7 151 2.6E-33 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 TDE_1273 c031e94ecf962cfa6356824af04e9fd0 531 Gene3D G3DSA:3.90.76.10 69 203 5.0E-105 T 12-10-2018 TDE_1273 c031e94ecf962cfa6356824af04e9fd0 531 Gene3D G3DSA:3.10.105.10 297 499 5.0E-105 T 12-10-2018 TDE_1273 c031e94ecf962cfa6356824af04e9fd0 531 Gene3D G3DSA:3.40.190.10 50 513 5.0E-105 T 12-10-2018 TDE_1273 c031e94ecf962cfa6356824af04e9fd0 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 447 5.2E-73 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain TDE_1273 c031e94ecf962cfa6356824af04e9fd0 531 SUPERFAMILY SSF53850 35 528 1.19E-104 T 12-10-2018 TDE_1273 c031e94ecf962cfa6356824af04e9fd0 531 PIRSF PIRSF002741 2 531 1.0E-80 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TDE_0593 1bab75fca1847a0c93137387df4854b6 631 Gene3D G3DSA:3.80.10.10 250 356 2.4E-17 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0593 1bab75fca1847a0c93137387df4854b6 631 Pfam PF12799 Leucine Rich repeats (2 copies) 358 397 1.1E-6 T 12-10-2018 IPR025875 Leucine rich repeat 4 TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SMART SM00369 147 170 16.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SMART SM00369 210 234 280.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SMART SM00369 357 378 150.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SMART SM00369 399 422 86.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SMART SM00369 483 506 250.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SMART SM00369 315 338 140.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SMART SM00369 252 272 350.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SMART SM00369 105 129 220.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SMART SM00369 273 296 68.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_0593 1bab75fca1847a0c93137387df4854b6 631 Gene3D G3DSA:3.80.10.10 83 249 3.1E-40 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0593 1bab75fca1847a0c93137387df4854b6 631 Gene3D G3DSA:3.80.10.10 357 613 2.1E-52 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SUPERFAMILY SSF52058 336 569 7.82E-32 T 12-10-2018 TDE_0593 1bab75fca1847a0c93137387df4854b6 631 SUPERFAMILY SSF52058 86 374 8.16E-42 T 12-10-2018 TDE_1370 1d27198cade1d348083bb97e312010cd 496 SUPERFAMILY SSF64153 8 240 3.4E-47 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 TDE_1370 1d27198cade1d348083bb97e312010cd 496 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 9 204 3.4E-44 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TDE_1370 1d27198cade1d348083bb97e312010cd 496 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 426 436 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site TDE_1370 1d27198cade1d348083bb97e312010cd 496 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 217 488 17.694 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TDE_1370 1d27198cade1d348083bb97e312010cd 496 SUPERFAMILY SSF53613 219 482 4.0E-45 T 12-10-2018 IPR029056 Ribokinase-like TDE_1370 1d27198cade1d348083bb97e312010cd 496 Gene3D G3DSA:3.40.1190.20 214 489 9.5E-70 T 12-10-2018 IPR029056 Ribokinase-like TDE_1370 1d27198cade1d348083bb97e312010cd 496 Pfam PF01256 Carbohydrate kinase 242 476 7.3E-45 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TDE_1370 1d27198cade1d348083bb97e312010cd 496 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 203 20.073 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TDE_1370 1d27198cade1d348083bb97e312010cd 496 Pfam PF03853 YjeF-related protein N-terminus 25 182 3.3E-35 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TDE_1370 1d27198cade1d348083bb97e312010cd 496 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 215 481 5.0E-53 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TDE_1370 1d27198cade1d348083bb97e312010cd 496 PIRSF PIRSF017184 4 491 4.2E-115 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 TDE_1370 1d27198cade1d348083bb97e312010cd 496 Gene3D G3DSA:3.40.50.10260 2 210 4.7E-48 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 TDE_1811 32b41038a3c1a2918916b3f311e312c0 236 Gene3D G3DSA:3.40.1350.10 9 128 2.5E-8 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TDE_1811 32b41038a3c1a2918916b3f311e312c0 236 SUPERFAMILY SSF52980 4 121 3.49E-13 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TDE_1811 32b41038a3c1a2918916b3f311e312c0 236 Pfam PF04471 Restriction endonuclease 32 120 1.5E-8 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 TDE_2707 0b897d9819d321b54cd342d911510e76 300 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 239 2.4E-73 T 12-10-2018 TDE_2707 0b897d9819d321b54cd342d911510e76 300 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 298 1.3E-43 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 SUPERFAMILY SSF47384 126 211 1.16E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 SMART SM00387 252 363 6.8E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 362 5.6E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 SUPERFAMILY SSF52172 2 105 1.85E-35 T 12-10-2018 IPR011006 CheY-like superfamily TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 Gene3D G3DSA:3.40.50.2300 1 105 3.6E-30 T 12-10-2018 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 SMART SM00388 143 210 1.3E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 SUPERFAMILY SSF55874 199 361 2.49E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 Gene3D G3DSA:1.10.287.130 106 210 1.8E-25 T 12-10-2018 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 Pfam PF00072 Response regulator receiver domain 4 105 1.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 2.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 316 2.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 2.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 2.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 Gene3D G3DSA:3.30.565.10 211 366 3.9E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 SMART SM00448 2 114 5.0E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0492 fb78cb7314c848b6d9df7530298f3691 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 210 5.0E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 SUPERFAMILY SSF53067 2 196 1.38E-34 T 12-10-2018 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 SUPERFAMILY SSF53067 206 434 6.48E-43 T 12-10-2018 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 Gene3D G3DSA:3.30.420.40 37 434 1.0E-65 T 12-10-2018 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 Pfam PF00349 Hexokinase 26 192 6.5E-15 T 12-10-2018 IPR022672 Hexokinase, N-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 Gene3D G3DSA:3.40.367.20 26 423 1.0E-65 T 12-10-2018 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 Pfam PF03727 Hexokinase 207 435 4.9E-37 T 12-10-2018 IPR022673 Hexokinase, C-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 PRINTS PR00475 Hexokinase family signature 346 368 2.2E-21 T 12-10-2018 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 PRINTS PR00475 Hexokinase family signature 207 221 2.2E-21 T 12-10-2018 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 PRINTS PR00475 Hexokinase family signature 64 80 2.2E-21 T 12-10-2018 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 PRINTS PR00475 Hexokinase family signature 179 195 2.2E-21 T 12-10-2018 TDE_2469 ad1945d296be924a5a6bf1eec381b65b 437 PRINTS PR00475 Hexokinase family signature 269 291 2.2E-21 T 12-10-2018 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SUPERFAMILY SSF52540 388 473 1.2E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 170 1089 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Pfam PF02559 CarD-like/TRCF domain 492 587 3.7E-28 T 12-10-2018 IPR003711 CarD-like/TRCF domain TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Gene3D G3DSA:3.90.1150.50 1012 1155 2.2E-31 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Gene3D G3DSA:3.40.50.11180 44 322 1.2E-49 T 12-10-2018 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Gene3D G3DSA:3.30.2060.10 151 240 1.2E-49 T 12-10-2018 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Gene3D G3DSA:3.40.50.300 491 1002 1.2E-236 T 12-10-2018 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Gene3D G3DSA:2.30.30.840 495 553 1.2E-236 T 12-10-2018 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Pfam PF00270 DEAD/DEAH box helicase 620 776 6.2E-17 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SUPERFAMILY SSF143517 1000 1154 1.02E-29 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SMART SM00487 612 802 6.1E-32 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Pfam PF03461 TRCF domain 1017 1109 1.8E-23 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SUPERFAMILY SSF52540 536 795 2.5E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SMART SM01058 491 588 8.7E-46 T 12-10-2018 IPR003711 CarD-like/TRCF domain TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1116 26.949 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SMART SM00490 838 922 1.8E-19 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SMART SM00982 1015 1115 2.1E-31 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Gene3D G3DSA:3.40.50.300 554 793 1.2E-236 T 12-10-2018 TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SUPERFAMILY SSF141259 484 559 7.06E-21 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 Pfam PF00271 Helicase conserved C-terminal domain 816 921 7.8E-19 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SUPERFAMILY SSF52540 20 371 3.84E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1287 e09cd792fa436e48091ba2394d78be76 1155 SUPERFAMILY SSF52540 794 1002 2.21E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0140 302cbbed347c25678f0fb4de798b7eb9 358 Gene3D G3DSA:3.30.420.10 196 358 6.7E-6 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_0140 302cbbed347c25678f0fb4de798b7eb9 358 SUPERFAMILY SSF53098 205 357 4.17E-19 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_0140 302cbbed347c25678f0fb4de798b7eb9 358 Pfam PF00665 Integrase core domain 204 317 4.8E-8 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TDE_0140 302cbbed347c25678f0fb4de798b7eb9 358 Pfam PF13936 Helix-turn-helix domain 12 55 1.6E-13 T 12-10-2018 IPR025246 Transposase IS30-like HTH domain TDE_0140 302cbbed347c25678f0fb4de798b7eb9 358 SUPERFAMILY SSF88659 11 56 3.4E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_1752 302cbbed347c25678f0fb4de798b7eb9 358 Gene3D G3DSA:3.30.420.10 196 358 6.7E-6 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_1752 302cbbed347c25678f0fb4de798b7eb9 358 SUPERFAMILY SSF53098 205 357 4.17E-19 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_1752 302cbbed347c25678f0fb4de798b7eb9 358 Pfam PF00665 Integrase core domain 204 317 4.8E-8 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TDE_1752 302cbbed347c25678f0fb4de798b7eb9 358 Pfam PF13936 Helix-turn-helix domain 12 55 1.6E-13 T 12-10-2018 IPR025246 Transposase IS30-like HTH domain TDE_1752 302cbbed347c25678f0fb4de798b7eb9 358 SUPERFAMILY SSF88659 11 56 3.4E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_1022 302cbbed347c25678f0fb4de798b7eb9 358 Gene3D G3DSA:3.30.420.10 196 358 6.7E-6 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_1022 302cbbed347c25678f0fb4de798b7eb9 358 SUPERFAMILY SSF53098 205 357 4.17E-19 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_1022 302cbbed347c25678f0fb4de798b7eb9 358 Pfam PF00665 Integrase core domain 204 317 4.8E-8 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TDE_1022 302cbbed347c25678f0fb4de798b7eb9 358 Pfam PF13936 Helix-turn-helix domain 12 55 1.6E-13 T 12-10-2018 IPR025246 Transposase IS30-like HTH domain TDE_1022 302cbbed347c25678f0fb4de798b7eb9 358 SUPERFAMILY SSF88659 11 56 3.4E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_1805 0562f552e33e05fb5be03f4cad2596ff 273 SUPERFAMILY SSF102114 7 182 5.49E-29 T 12-10-2018 TDE_1805 0562f552e33e05fb5be03f4cad2596ff 273 Pfam PF13353 4Fe-4S single cluster domain 13 104 1.5E-7 T 12-10-2018 TDE_1805 0562f552e33e05fb5be03f4cad2596ff 273 Pfam PF04055 Radical SAM superfamily 15 169 1.2E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_1805 0562f552e33e05fb5be03f4cad2596ff 273 Gene3D G3DSA:3.20.20.70 3 270 9.2E-33 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2296 1b2bb66bcabb45a9bc79df21eb4ba372 684 Gene3D G3DSA:1.25.40.10 31 105 2.0E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2296 1b2bb66bcabb45a9bc79df21eb4ba372 684 SUPERFAMILY SSF48452 32 101 1.18E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2296 1b2bb66bcabb45a9bc79df21eb4ba372 684 Gene3D G3DSA:2.120.10.30 232 448 8.3E-25 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TDE_2296 1b2bb66bcabb45a9bc79df21eb4ba372 684 Gene3D G3DSA:2.120.10.30 121 231 1.5E-9 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TDE_2296 1b2bb66bcabb45a9bc79df21eb4ba372 684 SUPERFAMILY SSF101898 150 394 3.92E-25 T 12-10-2018 TDE_2296 1b2bb66bcabb45a9bc79df21eb4ba372 684 Gene3D G3DSA:3.40.50.410 470 637 2.7E-6 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_2296 1b2bb66bcabb45a9bc79df21eb4ba372 684 SUPERFAMILY SSF53300 467 624 5.56E-8 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_0240 f6ad3b299f3fd3ac19278a48cf7c6d9c 512 PIRSF PIRSF037559 1 510 6.3E-276 T 12-10-2018 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta TDE_0240 f6ad3b299f3fd3ac19278a48cf7c6d9c 512 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 253 330 5.5E-7 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TDE_0240 f6ad3b299f3fd3ac19278a48cf7c6d9c 512 Gene3D G3DSA:3.40.47.10 169 389 1.7E-6 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 TDE_0240 f6ad3b299f3fd3ac19278a48cf7c6d9c 512 SUPERFAMILY SSF53901 182 289 1.19E-9 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 TDE_1481 23aefa527fa002f95a4d352753c4d9cd 378 SUPERFAMILY SSF55729 10 366 3.96E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_1481 23aefa527fa002f95a4d352753c4d9cd 378 Gene3D G3DSA:3.40.630.30 203 375 2.0E-6 T 12-10-2018 TDE_2714 fc5dd01a1ed07a3baaeccd0cbdec905b 663 SUPERFAMILY SSF56436 418 660 1.7E-46 T 12-10-2018 IPR016187 C-type lectin fold TDE_2714 fc5dd01a1ed07a3baaeccd0cbdec905b 663 Gene3D G3DSA:3.90.1580.10 395 661 3.6E-76 T 12-10-2018 TDE_2714 fc5dd01a1ed07a3baaeccd0cbdec905b 663 Pfam PF03781 Sulfatase-modifying factor enzyme 1 424 658 1.5E-34 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_2143 eabc45e1ef78ec93da2d346324bbc7ef 765 Pfam PF00905 Penicillin binding protein transpeptidase domain 304 427 1.0E-9 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TDE_2143 eabc45e1ef78ec93da2d346324bbc7ef 765 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 38 759 3.9E-188 T 12-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_2143 eabc45e1ef78ec93da2d346324bbc7ef 765 Gene3D G3DSA:3.40.710.10 249 459 2.3E-35 T 12-10-2018 TDE_2143 eabc45e1ef78ec93da2d346324bbc7ef 765 Gene3D G3DSA:3.40.710.10 460 614 3.1E-17 T 12-10-2018 TDE_2143 eabc45e1ef78ec93da2d346324bbc7ef 765 Pfam PF00912 Transglycosylase 67 226 1.8E-43 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_2143 eabc45e1ef78ec93da2d346324bbc7ef 765 Gene3D G3DSA:1.10.3810.10 58 248 5.2E-48 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_2143 eabc45e1ef78ec93da2d346324bbc7ef 765 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 668 756 2.5E-16 T 12-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_2143 eabc45e1ef78ec93da2d346324bbc7ef 765 SUPERFAMILY SSF56601 209 607 6.1E-66 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TDE_2143 eabc45e1ef78ec93da2d346324bbc7ef 765 SUPERFAMILY SSF53955 38 259 4.22E-57 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily TDE_0664 843a7d763ce08e3ca8f187600c568725 422 Gene3D G3DSA:3.30.1330.60 282 422 1.4E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_0664 843a7d763ce08e3ca8f187600c568725 422 SUPERFAMILY SSF103088 312 419 4.45E-27 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_0664 843a7d763ce08e3ca8f187600c568725 422 Pfam PF00691 OmpA family 318 413 3.2E-21 T 12-10-2018 IPR006665 OmpA-like domain TDE_0456 ae9c55564338973ab066abaf77818772 282 Gene3D G3DSA:3.20.20.70 1 281 9.3E-141 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0456 ae9c55564338973ab066abaf77818772 282 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 1 282 47.93 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 TDE_0456 ae9c55564338973ab066abaf77818772 282 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 7 276 6.3E-142 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 TDE_0456 ae9c55564338973ab066abaf77818772 282 SUPERFAMILY SSF51366 8 258 1.65E-64 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TDE_0456 ae9c55564338973ab066abaf77818772 282 ProSitePatterns PS01235 PdxS/SNZ family signature. 195 213 - T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 TDE_0456 ae9c55564338973ab066abaf77818772 282 Pfam PF01680 SOR/SNZ family 4 202 4.6E-104 T 12-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 TDE_0456 ae9c55564338973ab066abaf77818772 282 PIRSF PIRSF029271 2 282 2.0E-141 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 TDE_0729 0873c85c2e5a431c2b0e2b3395d860a0 338 SUPERFAMILY SSF52540 4 195 2.0E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0729 0873c85c2e5a431c2b0e2b3395d860a0 338 SUPERFAMILY SSF48019 200 327 6.12E-16 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TDE_0729 0873c85c2e5a431c2b0e2b3395d860a0 338 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 3 318 4.3E-38 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 TDE_0729 0873c85c2e5a431c2b0e2b3395d860a0 338 Gene3D G3DSA:1.20.272.10 198 329 8.1E-13 T 12-10-2018 TDE_0729 0873c85c2e5a431c2b0e2b3395d860a0 338 Gene3D G3DSA:3.40.50.300 2 124 1.1E-11 T 12-10-2018 TDE_0729 0873c85c2e5a431c2b0e2b3395d860a0 338 Gene3D G3DSA:1.10.8.60 131 197 6.8E-7 T 12-10-2018 TDE_0729 0873c85c2e5a431c2b0e2b3395d860a0 338 Pfam PF06144 DNA polymerase III, delta subunit 7 172 1.6E-13 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 TDE_0164 e4e6efabdb323bad943898eb45f83efb 193 Pfam PF12672 Protein of unknown function (DUF3793) 10 190 1.4E-49 T 12-10-2018 IPR024523 Protein of unknown function DUF3793 TDE_0296 b19404951facbff8e075d2a9f00ee15b 299 SMART SM01222 4 181 1.2E-113 T 12-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TDE_0296 b19404951facbff8e075d2a9f00ee15b 299 SMART SM01221 182 296 1.1E-76 T 12-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_0296 b19404951facbff8e075d2a9f00ee15b 299 Gene3D G3DSA:3.30.70.670 183 298 3.4E-38 T 12-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_0296 b19404951facbff8e075d2a9f00ee15b 299 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 5 180 2.5E-71 T 12-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TDE_0296 b19404951facbff8e075d2a9f00ee15b 299 SUPERFAMILY SSF55116 4 181 4.19E-70 T 12-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TDE_0296 b19404951facbff8e075d2a9f00ee15b 299 Pfam PF02971 Formiminotransferase domain 183 286 3.9E-26 T 12-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_0296 b19404951facbff8e075d2a9f00ee15b 299 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 2 299 2.1E-132 T 12-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_0296 b19404951facbff8e075d2a9f00ee15b 299 SUPERFAMILY SSF55116 182 298 1.78E-47 T 12-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TDE_0296 b19404951facbff8e075d2a9f00ee15b 299 Gene3D G3DSA:3.30.990.10 2 181 4.0E-67 T 12-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 TDE_1893 16891ac3028c954e19295a4175013241 601 Pfam PF06421 GTP-binding protein LepA C-terminus 491 597 3.2E-47 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal TDE_1893 16891ac3028c954e19295a4175013241 601 Pfam PF14492 Elongation Factor G, domain II 295 367 9.9E-7 T 12-10-2018 TDE_1893 16891ac3028c954e19295a4175013241 601 PRINTS PR00315 GTP-binding elongation factor signature 52 60 1.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 SUPERFAMILY SSF50447 168 291 1.75E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_1893 16891ac3028c954e19295a4175013241 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 278.381 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 Pfam PF00679 Elongation factor G C-terminus 403 488 1.2E-19 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like TDE_1893 16891ac3028c954e19295a4175013241 601 Gene3D G3DSA:3.30.70.3380 371 482 2.1E-42 T 12-10-2018 TDE_1893 16891ac3028c954e19295a4175013241 601 Gene3D G3DSA:3.30.70.870 289 370 2.9E-34 T 12-10-2018 TDE_1893 16891ac3028c954e19295a4175013241 601 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 1.6E-303 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 Pfam PF00009 Elongation factor Tu GTP binding domain 5 184 1.8E-53 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 Gene3D G3DSA:3.30.70.2570 483 557 6.2E-31 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily TDE_1893 16891ac3028c954e19295a4175013241 601 SUPERFAMILY SSF54980 295 373 4.68E-19 T 12-10-2018 IPR035647 EF-G domain III/V-like TDE_1893 16891ac3028c954e19295a4175013241 601 Gene3D G3DSA:3.40.50.300 2 188 2.2E-71 T 12-10-2018 TDE_1893 16891ac3028c954e19295a4175013241 601 SUPERFAMILY SSF52540 1 202 1.17E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1893 16891ac3028c954e19295a4175013241 601 Pfam PF03144 Elongation factor Tu domain 2 208 278 3.5E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 SUPERFAMILY SSF54980 404 497 1.39E-23 T 12-10-2018 IPR035647 EF-G domain III/V-like TDE_1893 16891ac3028c954e19295a4175013241 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 179 1.3E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_1893 16891ac3028c954e19295a4175013241 601 Gene3D G3DSA:2.40.30.10 189 288 6.9E-33 T 12-10-2018 TDE_2430 b1e1d34e9b472601569177593080af6f 379 Pfam PF13437 HlyD family secretion protein 237 342 1.2E-13 T 12-10-2018 TDE_2430 b1e1d34e9b472601569177593080af6f 379 Gene3D G3DSA:2.40.30.170 51 363 1.6E-20 T 12-10-2018 TDE_2430 b1e1d34e9b472601569177593080af6f 379 Pfam PF13533 Biotin-lipoyl like 67 106 3.8E-5 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TDE_2430 b1e1d34e9b472601569177593080af6f 379 Gene3D G3DSA:1.10.287.470 97 237 1.6E-20 T 12-10-2018 TDE_2430 b1e1d34e9b472601569177593080af6f 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 331 3.0E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_2430 b1e1d34e9b472601569177593080af6f 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 379 3.0E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_2430 b1e1d34e9b472601569177593080af6f 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 3.0E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_2430 b1e1d34e9b472601569177593080af6f 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 351 366 3.0E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_2430 b1e1d34e9b472601569177593080af6f 379 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 33 56 3.0E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_2430 b1e1d34e9b472601569177593080af6f 379 Gene3D G3DSA:2.40.50.100 62 275 1.6E-20 T 12-10-2018 TDE_2488 240b029ac9fa1f80451835eb642199ff 329 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 36 322 6.4E-85 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TDE_2488 240b029ac9fa1f80451835eb642199ff 329 Gene3D G3DSA:3.40.50.150 96 328 3.8E-46 T 12-10-2018 TDE_2488 240b029ac9fa1f80451835eb642199ff 329 Gene3D G3DSA:1.10.8.10 18 95 5.1E-15 T 12-10-2018 TDE_2488 240b029ac9fa1f80451835eb642199ff 329 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 35 322 1.4E-50 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 TDE_2488 240b029ac9fa1f80451835eb642199ff 329 SUPERFAMILY SSF53335 27 312 2.08E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0371 633f3b843b19e18e267e0baae0dbc6b2 615 SUPERFAMILY SSF53474 14 288 5.23E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0371 633f3b843b19e18e267e0baae0dbc6b2 615 Pfam PF12146 Serine aminopeptidase, S33 82 188 1.5E-13 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 TDE_0371 633f3b843b19e18e267e0baae0dbc6b2 615 Gene3D G3DSA:3.40.50.1820 54 333 1.9E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0552 8968bf332e98d7b8f2397d890303c473 354 SUPERFAMILY SSF48403 41 235 1.78E-31 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_0552 8968bf332e98d7b8f2397d890303c473 354 Pfam PF12796 Ankyrin repeats (3 copies) 148 232 1.8E-9 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_0552 8968bf332e98d7b8f2397d890303c473 354 SMART SM00248 212 242 1600.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0552 8968bf332e98d7b8f2397d890303c473 354 SMART SM00248 48 77 300.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0552 8968bf332e98d7b8f2397d890303c473 354 SMART SM00248 141 170 0.44 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0552 8968bf332e98d7b8f2397d890303c473 354 SMART SM00248 78 107 1.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0552 8968bf332e98d7b8f2397d890303c473 354 SMART SM00248 179 208 1.2E-4 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0552 8968bf332e98d7b8f2397d890303c473 354 Gene3D G3DSA:1.25.40.20 133 235 2.7E-20 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_0552 8968bf332e98d7b8f2397d890303c473 354 Gene3D G3DSA:1.25.40.20 18 132 5.9E-10 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_1838 43f8ded62bcd3bd9ec65ac11b2ae0894 65 SUPERFAMILY SSF54786 6 65 1.61E-17 T 12-10-2018 TDE_1838 43f8ded62bcd3bd9ec65ac11b2ae0894 65 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 9 64 1.8E-21 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TDE_1838 43f8ded62bcd3bd9ec65ac11b2ae0894 65 Gene3D G3DSA:3.30.920.30 3 64 2.9E-27 T 12-10-2018 IPR038570 HicA superfamily TDE_2008 cc3e14e53f26392c42b9d22050f1ef27 585 Gene3D G3DSA:3.40.50.300 331 584 8.6E-84 T 12-10-2018 TDE_2008 cc3e14e53f26392c42b9d22050f1ef27 585 SUPERFAMILY SSF90123 8 321 1.7E-29 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2008 cc3e14e53f26392c42b9d22050f1ef27 585 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2008 cc3e14e53f26392c42b9d22050f1ef27 585 Pfam PF00664 ABC transporter transmembrane region 30 294 1.1E-9 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2008 cc3e14e53f26392c42b9d22050f1ef27 585 SMART SM00382 367 553 5.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2008 cc3e14e53f26392c42b9d22050f1ef27 585 SUPERFAMILY SSF52540 331 575 2.66E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2008 cc3e14e53f26392c42b9d22050f1ef27 585 Gene3D G3DSA:1.20.1560.10 4 321 1.6E-19 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2008 cc3e14e53f26392c42b9d22050f1ef27 585 Pfam PF00005 ABC transporter 359 507 2.2E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 PRINTS PR00315 GTP-binding elongation factor signature 7 20 4.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 PRINTS PR00315 GTP-binding elongation factor signature 53 61 4.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 PRINTS PR00315 GTP-binding elongation factor signature 73 83 4.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 PRINTS PR00315 GTP-binding elongation factor signature 125 134 4.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 PRINTS PR00315 GTP-binding elongation factor signature 89 100 4.1E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Pfam PF14492 Elongation Factor G, domain II 398 471 6.6E-27 T 12-10-2018 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 SMART SM00889 474 601 1.4E-21 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 680 1.4E-257 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Gene3D G3DSA:3.40.50.300 1 286 1.0E-108 T 12-10-2018 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Pfam PF03764 Elongation factor G, domain IV 473 600 2.2E-21 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Pfam PF00009 Elongation factor Tu GTP binding domain 4 275 9.3E-70 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Gene3D G3DSA:3.30.230.10 478 680 2.5E-62 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 SUPERFAMILY SSF52540 3 275 4.24E-103 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Pfam PF03144 Elongation factor Tu domain 2 318 384 9.6E-13 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 174 2.6E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 SUPERFAMILY SSF50447 259 398 3.06E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Gene3D G3DSA:2.40.30.10 287 399 1.9E-36 T 12-10-2018 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Gene3D G3DSA:3.30.70.870 400 477 2.8E-26 T 12-10-2018 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Hamap MF_00054_B Elongation factor G [fusA]. 1 683 98.352 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Pfam PF00679 Elongation factor G C-terminus 603 680 4.1E-25 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 Gene3D G3DSA:3.30.70.240 607 677 2.5E-62 T 12-10-2018 TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 SUPERFAMILY SSF54980 606 681 2.01E-22 T 12-10-2018 IPR035647 EF-G domain III/V-like TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 SMART SM00838 603 681 1.4E-30 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 SUPERFAMILY SSF54980 398 475 2.88E-20 T 12-10-2018 IPR035647 EF-G domain III/V-like TDE_0285 5c3f832b5b527f80f66c340e8c41ef36 683 SUPERFAMILY SSF54211 473 602 4.17E-23 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 SUPERFAMILY SSF55781 8 188 9.38E-40 T 12-10-2018 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 Gene3D G3DSA:1.10.8.60 368 439 4.7E-24 T 12-10-2018 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 SMART SM00065 28 176 4.4E-21 T 12-10-2018 IPR003018 GAF domain GO:0005515 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 Gene3D G3DSA:3.30.450.40 5 180 1.1E-39 T 12-10-2018 IPR029016 GAF-like domain superfamily TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 408 417 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 219 232 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 SUPERFAMILY SSF46689 408 502 1.97E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 483 2.3E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 483 503 2.3E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 Gene3D G3DSA:3.40.50.300 183 366 5.6E-64 T 12-10-2018 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 SUPERFAMILY SSF52540 196 436 7.43E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 Pfam PF02954 Bacterial regulatory protein, Fis family 466 499 2.1E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 SMART SM00382 215 359 5.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 Gene3D G3DSA:1.10.10.60 449 504 2.2E-14 T 12-10-2018 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 Pfam PF01590 GAF domain 28 165 1.1E-14 T 12-10-2018 IPR003018 GAF domain GO:0005515 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 Pfam PF00158 Sigma-54 interaction domain 196 361 3.0E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TDE_2079 91d0f6d63d71fe6c7890f31f2fcc8443 505 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 281 296 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 12-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 3.8E-38 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 3.8E-38 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 3.8E-38 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 3.8E-38 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 12-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 Gene3D G3DSA:3.40.630.20 1 217 5.9E-75 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 2 216 4.0E-78 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 SUPERFAMILY SSF53182 1 216 3.53E-67 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 203 38.384 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 PIRSF PIRSF015592 1 215 1.9E-79 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TDE_0175 91574dc66391c4a72516ac93071f67b6 217 Pfam PF01470 Pyroglutamyl peptidase 1 205 5.3E-83 T 12-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 TDE_1549 a8c79dcff97167a8e6d34f76d852c7da 195 Gene3D G3DSA:3.40.1360.10 74 194 2.0E-43 T 12-10-2018 TDE_1549 a8c79dcff97167a8e6d34f76d852c7da 195 TIGRFAM TIGR00615 recR: recombination protein RecR 2 192 3.4E-77 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TDE_1549 a8c79dcff97167a8e6d34f76d852c7da 195 Gene3D G3DSA:1.10.8.420 1 49 3.1E-16 T 12-10-2018 TDE_1549 a8c79dcff97167a8e6d34f76d852c7da 195 Pfam PF02132 RecR protein 36 75 1.1E-14 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger TDE_1549 a8c79dcff97167a8e6d34f76d852c7da 195 SUPERFAMILY SSF111304 2 195 4.45E-71 T 12-10-2018 IPR023627 Recombination protein RecR TDE_1549 a8c79dcff97167a8e6d34f76d852c7da 195 SMART SM00493 77 162 1.8E-9 T 12-10-2018 IPR006171 TOPRIM domain TDE_1549 a8c79dcff97167a8e6d34f76d852c7da 195 ProSitePatterns PS01300 RecR protein signature. 54 75 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 TDE_1549 a8c79dcff97167a8e6d34f76d852c7da 195 Hamap MF_00017 Recombination protein RecR [recR]. 1 195 92.252 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TDE_1549 a8c79dcff97167a8e6d34f76d852c7da 195 Pfam PF13662 Toprim domain 78 168 9.3E-20 T 12-10-2018 IPR006171 TOPRIM domain TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 Gene3D G3DSA:1.25.40.10 31 91 3.5E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 SMART SM00028 277 310 0.57 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 SMART SM00028 136 169 9.5E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 SMART SM00028 204 237 46.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 SMART SM00028 238 271 16.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 SMART SM00028 170 203 1.5E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 SUPERFAMILY SSF48452 40 166 2.35E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 Pfam PF13174 Tetratricopeptide repeat 278 303 0.069 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 Gene3D G3DSA:1.25.40.10 236 332 3.9E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 SUPERFAMILY SSF48452 133 311 6.45E-31 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 Pfam PF04471 Restriction endonuclease 394 449 1.4E-4 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 Pfam PF13432 Tetratricopeptide repeat 146 204 8.6E-7 T 12-10-2018 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 Pfam PF13432 Tetratricopeptide repeat 211 265 0.0071 T 12-10-2018 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 Pfam PF13432 Tetratricopeptide repeat 40 86 5.9E-5 T 12-10-2018 TDE_1125 bbec3b28df46b36adca4904fd42bb8fe 457 Gene3D G3DSA:1.25.40.10 92 235 2.6E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1978 223181502d299243b85c6b42ddf705ea 85 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 84 1.6E-18 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TDE_1978 223181502d299243b85c6b42ddf705ea 85 Gene3D G3DSA:3.30.2310.20 1 85 3.2E-29 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_1978 223181502d299243b85c6b42ddf705ea 85 SUPERFAMILY SSF143011 1 82 9.94E-24 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_1978 223181502d299243b85c6b42ddf705ea 85 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 84 4.7E-16 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 Gene3D G3DSA:2.30.42.10 310 425 1.1E-21 T 12-10-2018 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 SUPERFAMILY SSF50156 292 421 1.13E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 Pfam PF13365 Trypsin-like peptidase domain 133 272 2.9E-36 T 12-10-2018 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 PRINTS PR00834 HtrA/DegQ protease family signature 163 183 3.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 3.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 PRINTS PR00834 HtrA/DegQ protease family signature 265 282 3.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 PRINTS PR00834 HtrA/DegQ protease family signature 370 382 3.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 PRINTS PR00834 HtrA/DegQ protease family signature 142 154 3.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 PRINTS PR00834 HtrA/DegQ protease family signature 206 230 3.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 SUPERFAMILY SSF50494 99 308 1.6E-62 T 12-10-2018 IPR009003 Peptidase S1, PA clan TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 Pfam PF13180 PDZ domain 333 421 1.7E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 SMART SM00228 321 412 1.0E-5 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_1966 a8d885d8bf5e80ab0523dec634b8f7f6 425 Gene3D G3DSA:2.40.10.120 89 308 2.7E-73 T 12-10-2018 TDE_1284 62c455cb444de007951d6443d686cae0 707 SMART SM00283 417 664 3.6E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_1284 62c455cb444de007951d6443d686cae0 707 SMART SM00304 320 374 2.5E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_1284 62c455cb444de007951d6443d686cae0 707 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 482 650 1.1E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_1284 62c455cb444de007951d6443d686cae0 707 SUPERFAMILY SSF58104 420 706 2.22E-46 T 12-10-2018 TDE_1284 62c455cb444de007951d6443d686cae0 707 Gene3D G3DSA:1.20.1480.50 285 379 7.1E-10 T 12-10-2018 TDE_1284 62c455cb444de007951d6443d686cae0 707 SUPERFAMILY SSF103190 78 198 1.33E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_1284 62c455cb444de007951d6443d686cae0 707 Gene3D G3DSA:3.30.450.20 157 284 1.5E-15 T 12-10-2018 TDE_1284 62c455cb444de007951d6443d686cae0 707 SUPERFAMILY SSF58104 342 440 8.37E-7 T 12-10-2018 TDE_1284 62c455cb444de007951d6443d686cae0 707 Gene3D G3DSA:1.10.287.950 388 706 1.6E-49 T 12-10-2018 TDE_1284 62c455cb444de007951d6443d686cae0 707 Pfam PF02743 Cache domain 60 281 1.6E-22 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_2270 8f9313dedf1774618873ae80e8915750 699 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 623 2.3E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2270 8f9313dedf1774618873ae80e8915750 699 Gene3D G3DSA:1.10.287.950 434 654 4.7E-42 T 12-10-2018 TDE_2270 8f9313dedf1774618873ae80e8915750 699 Gene3D G3DSA:1.10.287.950 312 430 2.9E-9 T 12-10-2018 TDE_2270 8f9313dedf1774618873ae80e8915750 699 SMART SM00283 409 656 8.3E-61 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2270 8f9313dedf1774618873ae80e8915750 699 Pfam PF02743 Cache domain 48 274 2.1E-31 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_2270 8f9313dedf1774618873ae80e8915750 699 SUPERFAMILY SSF103190 90 177 4.97E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_2270 8f9313dedf1774618873ae80e8915750 699 SUPERFAMILY SSF58104 423 654 7.85E-45 T 12-10-2018 TDE_2270 8f9313dedf1774618873ae80e8915750 699 Gene3D G3DSA:3.30.450.20 149 294 3.2E-24 T 12-10-2018 TDE_2270 8f9313dedf1774618873ae80e8915750 699 SUPERFAMILY SSF58104 334 432 1.57E-7 T 12-10-2018 TDE_2270 8f9313dedf1774618873ae80e8915750 699 SMART SM00304 312 366 9.3E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_1105 d2fd88b5e8ce7f947d1960e12480d580 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 113 9.6E-30 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TDE_1105 d2fd88b5e8ce7f947d1960e12480d580 132 Gene3D G3DSA:3.30.300.20 1 105 1.2E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_1105 d2fd88b5e8ce7f947d1960e12480d580 132 SUPERFAMILY SSF89919 1 112 2.62E-28 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily TDE_1105 d2fd88b5e8ce7f947d1960e12480d580 132 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 TDE_1105 d2fd88b5e8ce7f947d1960e12480d580 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 110 24.633 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TDE_1105 d2fd88b5e8ce7f947d1960e12480d580 132 Pfam PF02033 Ribosome-binding factor A 5 106 2.8E-27 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TDE_1105 d2fd88b5e8ce7f947d1960e12480d580 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 97 5.0E-47 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TDE_1356 483fa26ab9ca208c9125169d473ace02 331 Gene3D G3DSA:3.40.190.10 116 260 1.2E-29 T 12-10-2018 TDE_1356 483fa26ab9ca208c9125169d473ace02 331 Gene3D G3DSA:3.40.190.10 31 285 1.2E-29 T 12-10-2018 TDE_1356 483fa26ab9ca208c9125169d473ace02 331 SUPERFAMILY SSF53850 26 327 1.76E-41 T 12-10-2018 TDE_1356 483fa26ab9ca208c9125169d473ace02 331 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 323 7.6E-61 T 12-10-2018 TDE_1073 7b15168ac1bde9152b4c8c9e0adaa803 346 SUPERFAMILY SSF161098 115 317 5.1E-15 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1073 7b15168ac1bde9152b4c8c9e0adaa803 346 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 137 341 7.0E-33 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_1073 7b15168ac1bde9152b4c8c9e0adaa803 346 Gene3D G3DSA:1.10.3720.10 108 336 1.1E-16 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1010 44c2a96a567c730c116ef889efccda63 954 Gene3D G3DSA:3.40.50.300 627 945 2.3E-140 T 12-10-2018 TDE_1010 44c2a96a567c730c116ef889efccda63 954 SUPERFAMILY SSF52540 19 581 1.33E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1010 44c2a96a567c730c116ef889efccda63 954 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1010 44c2a96a567c730c116ef889efccda63 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 12 935 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TDE_1010 44c2a96a567c730c116ef889efccda63 954 SMART SM00382 643 918 6.7E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1010 44c2a96a567c730c116ef889efccda63 954 Gene3D G3DSA:1.10.8.280 298 415 7.2E-244 T 12-10-2018 TDE_1010 44c2a96a567c730c116ef889efccda63 954 Gene3D G3DSA:3.30.190.20 139 248 7.2E-244 T 12-10-2018 TDE_1010 44c2a96a567c730c116ef889efccda63 954 Gene3D G3DSA:3.40.50.300 14 606 7.2E-244 T 12-10-2018 TDE_1010 44c2a96a567c730c116ef889efccda63 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 10 950 22.736 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TDE_1010 44c2a96a567c730c116ef889efccda63 954 Gene3D G3DSA:1.20.1580.10 702 840 2.3E-140 T 12-10-2018 TDE_1010 44c2a96a567c730c116ef889efccda63 954 SUPERFAMILY SSF52540 631 923 8.57E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1010 44c2a96a567c730c116ef889efccda63 954 Gene3D G3DSA:1.20.1580.10 99 504 7.2E-244 T 12-10-2018 TDE_1010 44c2a96a567c730c116ef889efccda63 954 ProSitePatterns PS00211 ABC transporters family signature. 840 854 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1042 401a61bba3e5f6f8ddd2c57a9345488b 144 SUPERFAMILY SSF51283 4 143 2.22E-51 T 12-10-2018 IPR036157 dUTPase-like superfamily TDE_1042 401a61bba3e5f6f8ddd2c57a9345488b 144 Gene3D G3DSA:2.70.40.10 2 143 3.6E-54 T 12-10-2018 IPR036157 dUTPase-like superfamily TDE_1042 401a61bba3e5f6f8ddd2c57a9345488b 144 Pfam PF00692 dUTPase 13 142 1.0E-30 T 12-10-2018 IPR029054 dUTPase-like TDE_1042 401a61bba3e5f6f8ddd2c57a9345488b 144 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 143 33.519 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TDE_1042 401a61bba3e5f6f8ddd2c57a9345488b 144 TIGRFAM TIGR00576 dut: dUTP diphosphatase 4 142 1.2E-55 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TDE_1373 c8c555b6cd49dfe97a9dcc939749102e 220 Pfam PF01966 HD domain 37 143 5.3E-9 T 12-10-2018 IPR006674 HD domain TDE_1373 c8c555b6cd49dfe97a9dcc939749102e 220 Gene3D G3DSA:1.10.3210.10 3 215 1.3E-24 T 12-10-2018 TDE_1373 c8c555b6cd49dfe97a9dcc939749102e 220 SMART SM00471 33 154 7.3E-6 T 12-10-2018 IPR003607 HD/PDEase domain TDE_1373 c8c555b6cd49dfe97a9dcc939749102e 220 SUPERFAMILY SSF109604 7 212 1.39E-26 T 12-10-2018 TDE_0986 9f582d952f00b4da4111f4cca998ab82 326 Pfam PF00005 ABC transporter 25 185 7.5E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0986 9f582d952f00b4da4111f4cca998ab82 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 321 2.4E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0986 9f582d952f00b4da4111f4cca998ab82 326 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0986 9f582d952f00b4da4111f4cca998ab82 326 SMART SM00382 34 243 2.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0986 9f582d952f00b4da4111f4cca998ab82 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 302 2.8E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0986 9f582d952f00b4da4111f4cca998ab82 326 SUPERFAMILY SSF52540 35 307 3.2E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0986 9f582d952f00b4da4111f4cca998ab82 326 Gene3D G3DSA:3.40.50.300 3 326 7.1E-98 T 12-10-2018 TDE_2185 01310538e4210cdbeae3bc02715a43db 414 Gene3D G3DSA:3.40.190.10 28 144 1.5E-5 T 12-10-2018 TDE_2185 01310538e4210cdbeae3bc02715a43db 414 SUPERFAMILY SSF53850 23 321 8.15E-20 T 12-10-2018 TDE_2185 01310538e4210cdbeae3bc02715a43db 414 Gene3D G3DSA:3.40.190.10 147 324 4.5E-9 T 12-10-2018 TDE_2185 01310538e4210cdbeae3bc02715a43db 414 Pfam PF13416 Bacterial extracellular solute-binding protein 43 318 1.5E-7 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 SMART SM01086 767 856 3.0E-37 T 12-10-2018 IPR019489 Clp ATPase, C-terminal TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 3.5E-40 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 3.5E-40 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 3.5E-40 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 3.5E-40 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 334 1.6E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Gene3D G3DSA:3.40.50.300 343 548 6.4E-70 T 12-10-2018 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Gene3D G3DSA:1.10.8.60 767 859 3.8E-29 T 12-10-2018 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 846 7.3E-26 T 12-10-2018 IPR019489 Clp ATPase, C-terminal TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.7E-12 T 12-10-2018 IPR004176 Clp, N-terminal TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.8E-10 T 12-10-2018 IPR004176 Clp, N-terminal TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Gene3D G3DSA:3.40.50.300 149 342 3.5E-75 T 12-10-2018 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Gene3D G3DSA:3.40.50.300 554 766 3.1E-86 T 12-10-2018 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 SMART SM00382 198 342 1.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 SMART SM00382 601 768 1.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 SUPERFAMILY SSF52540 550 853 1.55E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Gene3D G3DSA:1.10.1780.10 1 148 1.6E-37 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 761 2.4E-55 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 856 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 SUPERFAMILY SSF81923 4 156 1.47E-41 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TDE_2327 dc6c0977eff39cee473b177c975be4c2 859 SUPERFAMILY SSF52540 160 549 1.17E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 Gene3D G3DSA:1.20.1560.10 186 503 1.5E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 SUPERFAMILY SSF90123 185 500 9.68E-66 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 Pfam PF00664 ABC transporter transmembrane region 204 471 2.8E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 Pfam PF00005 ABC transporter 533 682 1.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 SUPERFAMILY SSF52540 511 752 7.07E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 Pfam PF03412 Peptidase C39 family 44 172 5.0E-32 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 51 749 5.0E-169 T 12-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 Gene3D G3DSA:3.90.70.10 34 183 9.1E-39 T 12-10-2018 TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 ProSitePatterns PS00211 ABC transporters family signature. 654 668 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 Gene3D G3DSA:3.40.50.300 510 758 5.2E-86 T 12-10-2018 TDE_2431 b0151f4e42ea78aeaf436343a8ccc51a 759 SMART SM00382 542 734 2.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 SUPERFAMILY SSF53920 187 572 7.98E-122 T 12-10-2018 IPR009016 Iron hydrogenase TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Gene3D G3DSA:3.40.50.1780 204 516 1.9E-136 T 12-10-2018 TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 SUPERFAMILY SSF54862 135 204 2.09E-14 T 12-10-2018 TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 221 512 7.6E-90 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Pfam PF12838 4Fe-4S dicluster domain 144 202 3.2E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Gene3D G3DSA:3.10.20.740 1 122 1.4E-37 T 12-10-2018 TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 SMART SM00902 517 576 1.3E-22 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Gene3D G3DSA:3.40.950.10 270 506 1.9E-136 T 12-10-2018 TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Gene3D G3DSA:4.10.260.20 517 588 5.4E-16 T 12-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 SMART SM00929 83 123 3.3E-12 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 139 516 4.0E-134 T 12-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 120 4.7E-13 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Pfam PF02256 Iron hydrogenase small subunit 523 572 3.4E-19 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Gene3D G3DSA:3.30.70.20 141 203 1.9E-136 T 12-10-2018 TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 SUPERFAMILY SSF54292 1 120 1.6E-28 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TDE_1593 e5a265dd9de7844990b491bb54839ca3 596 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 7.7E-15 T 12-10-2018 TDE_1293 04d7e2711af11301149dc627635ae78c 460 Pfam PF01523 Putative modulator of DNA gyrase 16 315 4.4E-38 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TDE_1293 04d7e2711af11301149dc627635ae78c 460 Gene3D G3DSA:3.30.2290.10 15 181 2.6E-7 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal TDE_1293 04d7e2711af11301149dc627635ae78c 460 SUPERFAMILY SSF111283 5 452 2.49E-83 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TDE_0454 3d8701e9bfd41772effffa9a71fb996a 276 PIRSF PIRSF004976 33 276 1.5E-47 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 TDE_0454 3d8701e9bfd41772effffa9a71fb996a 276 Gene3D G3DSA:3.40.50.620 34 274 1.7E-35 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_0454 3d8701e9bfd41772effffa9a71fb996a 276 Pfam PF01171 PP-loop family 67 211 2.6E-12 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TDE_0454 3d8701e9bfd41772effffa9a71fb996a 276 SUPERFAMILY SSF52402 44 249 9.91E-38 T 12-10-2018 TDE_2535 1479d883e4c8747e17169da38641af9b 471 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 470 3.0E-175 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.8E-137 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 Gene3D G3DSA:3.20.20.60 2 332 1.3E-185 T 12-10-2018 TDE_2535 1479d883e4c8747e17169da38641af9b 471 PRINTS PR01050 Pyruvate kinase family signature 59 75 3.0E-73 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 PRINTS PR01050 Pyruvate kinase family signature 266 290 3.0E-73 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 PRINTS PR01050 Pyruvate kinase family signature 184 198 3.0E-73 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 PRINTS PR01050 Pyruvate kinase family signature 291 309 3.0E-73 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 PRINTS PR01050 Pyruvate kinase family signature 241 265 3.0E-73 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 PRINTS PR01050 Pyruvate kinase family signature 214 240 3.0E-73 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 PRINTS PR01050 Pyruvate kinase family signature 310 326 3.0E-73 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 Gene3D G3DSA:2.40.33.10 70 166 1.3E-185 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 SUPERFAMILY SSF51621 1 341 8.72E-97 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TDE_2535 1479d883e4c8747e17169da38641af9b 471 SUPERFAMILY SSF52935 320 470 3.01E-38 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 SUPERFAMILY SSF50800 70 165 5.23E-26 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TDE_2535 1479d883e4c8747e17169da38641af9b 471 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 5.2E-31 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_2535 1479d883e4c8747e17169da38641af9b 471 Gene3D G3DSA:3.40.1380.20 333 466 1.3E-185 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 Gene3D G3DSA:1.25.40.10 287 475 3.4E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SMART SM00028 152 185 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SMART SM00028 424 457 27.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SMART SM00028 254 287 0.53 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SMART SM00028 322 355 220.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SMART SM00028 220 253 0.65 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SMART SM00028 288 321 170.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SMART SM00028 186 219 0.0052 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 Gene3D G3DSA:1.25.40.10 237 286 1.1E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SUPERFAMILY SSF48452 149 286 1.68E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 Pfam PF13181 Tetratricopeptide repeat 257 286 2.7E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 Gene3D G3DSA:1.25.40.10 156 236 6.0E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 Gene3D G3DSA:1.25.40.10 25 155 2.2E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SUPERFAMILY SSF48452 253 470 4.93E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 SUPERFAMILY SSF48452 86 177 2.28E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0993 34a44ecf913e5887ebc531292e5260ac 477 Pfam PF13432 Tetratricopeptide repeat 157 219 2.8E-8 T 12-10-2018 TDE_1378 bbee7b5c5f935eca1aa341107dff8367 48 SUPERFAMILY SSF54786 1 35 1.8E-8 T 12-10-2018 TDE_1378 bbee7b5c5f935eca1aa341107dff8367 48 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 29 4.5E-7 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TDE_1378 bbee7b5c5f935eca1aa341107dff8367 48 Gene3D G3DSA:3.30.920.30 1 37 1.5E-9 T 12-10-2018 IPR038570 HicA superfamily TDE_0464 bda39851c84efa9e7a175ce2733371a8 75 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 75 2.0E-29 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TDE_0464 bda39851c84efa9e7a175ce2733371a8 75 Pfam PF01106 NifU-like domain 7 73 6.5E-26 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TDE_0464 bda39851c84efa9e7a175ce2733371a8 75 SUPERFAMILY SSF117916 5 75 5.89E-23 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TDE_0464 bda39851c84efa9e7a175ce2733371a8 75 Gene3D G3DSA:3.30.300.130 1 75 7.2E-27 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TDE_2490 4662e2110d9f9a6ffe8166e72e32fe43 660 Pfam PF00270 DEAD/DEAH box helicase 133 292 4.6E-12 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TDE_2490 4662e2110d9f9a6ffe8166e72e32fe43 660 SMART SM00487 126 322 3.4E-19 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_2490 4662e2110d9f9a6ffe8166e72e32fe43 660 Gene3D G3DSA:1.10.8.630 5 115 5.2E-22 T 12-10-2018 TDE_2490 4662e2110d9f9a6ffe8166e72e32fe43 660 SUPERFAMILY SSF52540 145 527 1.98E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2490 4662e2110d9f9a6ffe8166e72e32fe43 660 TIGRFAM TIGR00595 priA: primosomal protein N' 151 657 2.2E-193 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TDE_2490 4662e2110d9f9a6ffe8166e72e32fe43 660 Pfam PF00271 Helicase conserved C-terminal domain 444 516 1.4E-8 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_2490 4662e2110d9f9a6ffe8166e72e32fe43 660 Gene3D G3DSA:3.40.50.300 118 309 3.8E-64 T 12-10-2018 TDE_2490 4662e2110d9f9a6ffe8166e72e32fe43 660 SMART SM00490 420 517 6.6E-10 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_2490 4662e2110d9f9a6ffe8166e72e32fe43 660 Hamap MF_00983 Probable primosomal protein N' [priA]. 7 659 23.765 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TDE_1205 7777728303c78b53027fb5094752832a 274 Gene3D G3DSA:1.10.150.130 1 74 1.6E-9 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal TDE_1205 7777728303c78b53027fb5094752832a 274 Pfam PF00589 Phage integrase family 78 253 4.4E-42 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TDE_1205 7777728303c78b53027fb5094752832a 274 Gene3D G3DSA:1.10.443.10 77 261 1.2E-57 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TDE_1205 7777728303c78b53027fb5094752832a 274 SUPERFAMILY SSF56349 3 256 2.03E-52 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TDE_1205 7777728303c78b53027fb5094752832a 274 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 1 56 4.3E-8 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TDE_0076 45f1e543a94cb266e76673fe40772d0e 265 SMART SM01133 20 237 2.1E-17 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TDE_0076 45f1e543a94cb266e76673fe40772d0e 265 Pfam PF01791 DeoC/LacD family aldolase 28 236 2.6E-24 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TDE_0076 45f1e543a94cb266e76673fe40772d0e 265 Gene3D G3DSA:3.20.20.70 4 265 8.1E-66 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0076 45f1e543a94cb266e76673fe40772d0e 265 SUPERFAMILY SSF51569 6 253 3.66E-54 T 12-10-2018 TDE_0076 45f1e543a94cb266e76673fe40772d0e 265 PIRSF PIRSF038992 1 265 4.0E-78 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 Gene3D G3DSA:1.25.40.10 108 225 4.3E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 Pfam PF07720 Tetratricopeptide repeat 11 24 0.036 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 SMART SM00028 176 209 9.2 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 SMART SM00028 36 69 0.17 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 SMART SM00028 107 140 6.2E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 SMART SM00028 141 175 270.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 SUPERFAMILY SSF48452 6 211 3.0E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 Gene3D G3DSA:1.25.40.10 2 107 2.3E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 Pfam PF13176 Tetratricopeptide repeat 41 68 6.1E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2297 74ec3540d869a3a80c9af88a2daad787 226 Pfam PF00515 Tetratricopeptide repeat 109 140 8.4E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TDE_1331 89b938847d6a0af5dc4cfcf297775429 708 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 152 683 4.0E-147 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 TDE_1331 89b938847d6a0af5dc4cfcf297775429 708 Gene3D G3DSA:3.20.70.20 168 690 1.8E-115 T 12-10-2018 TDE_1331 89b938847d6a0af5dc4cfcf297775429 708 Pfam PF03477 ATP cone domain 31 124 3.1E-16 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TDE_1331 89b938847d6a0af5dc4cfcf297775429 708 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 153 684 2.7E-175 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 TDE_1331 89b938847d6a0af5dc4cfcf297775429 708 SUPERFAMILY SSF51998 154 688 1.65E-155 T 12-10-2018 TDE_0769 8dfdcae336baf1b5f691b3e39dfc4939 94 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0769 8dfdcae336baf1b5f691b3e39dfc4939 94 SUPERFAMILY SSF54189 3 93 1.47E-29 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0769 8dfdcae336baf1b5f691b3e39dfc4939 94 Gene3D G3DSA:3.30.70.330 1 94 2.8E-33 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TDE_0769 8dfdcae336baf1b5f691b3e39dfc4939 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 21.447 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TDE_0769 8dfdcae336baf1b5f691b3e39dfc4939 94 Pfam PF00276 Ribosomal protein L23 5 89 5.1E-32 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 SUPERFAMILY SSF51735 4 144 2.83E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0351 b2e523c7363a83d075aefa85996a0117 315 Gene3D G3DSA:3.90.110.10 147 315 2.4E-59 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 144 1.2E-39 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 312 3.4E-27 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 174 180 - T 12-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 SUPERFAMILY SSF56327 145 311 4.46E-53 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 315 41.18 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 Gene3D G3DSA:3.40.50.720 1 146 5.4E-51 T 12-10-2018 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 3.6E-40 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 3.6E-40 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 3.6E-40 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 3.6E-40 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 3.6E-40 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 309 4.7E-109 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 TDE_0351 b2e523c7363a83d075aefa85996a0117 315 PIRSF PIRSF000102 2 315 4.6E-105 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 68 77 4.6E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 192 204 4.6E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 128 140 4.6E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 182 4.6E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 140 154 4.6E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 260 270 4.6E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 199 214 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 247 259 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 244 269 2.0E-59 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 220 241 2.0E-59 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 89 109 2.0E-59 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 128 2.0E-59 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 199 219 2.0E-59 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 70 89 2.0E-59 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 Pfam PF00813 FliP family 73 266 1.3E-72 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TDE_2760 1740c9e45a66cf3c109b0c2b4ea2bbaa 271 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 72 270 6.6E-85 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TDE_1500 0426014669dbc9b1acd2a53a60bf993b 435 SUPERFAMILY SSF56300 70 363 7.11E-27 T 12-10-2018 TDE_1500 0426014669dbc9b1acd2a53a60bf993b 435 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 70 346 5.9E-66 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA TDE_1500 0426014669dbc9b1acd2a53a60bf993b 435 SMART SM00854 69 346 5.8E-52 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA TDE_0448 579204d6ef291901f4fa243e669a2989 216 PIRSF PIRSF001357 1 216 1.1E-80 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TDE_0448 579204d6ef291901f4fa243e669a2989 216 SUPERFAMILY SSF51569 1 214 1.0E-81 T 12-10-2018 TDE_0448 579204d6ef291901f4fa243e669a2989 216 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 2 213 3.8E-79 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TDE_0448 579204d6ef291901f4fa243e669a2989 216 Pfam PF01791 DeoC/LacD family aldolase 6 195 1.4E-21 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TDE_0448 579204d6ef291901f4fa243e669a2989 216 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 33.399 T 12-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 TDE_0448 579204d6ef291901f4fa243e669a2989 216 Gene3D G3DSA:3.20.20.70 1 216 9.3E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0448 579204d6ef291901f4fa243e669a2989 216 SMART SM01133 2 215 1.3E-98 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TDE_2193 9c78693385f7350ab047faf2a9b8799d 165 SUPERFAMILY SSF53927 14 156 2.69E-34 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TDE_2193 9c78693385f7350ab047faf2a9b8799d 165 Gene3D G3DSA:3.40.140.10 9 162 1.7E-44 T 12-10-2018 TDE_2193 9c78693385f7350ab047faf2a9b8799d 165 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 86 121 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TDE_2193 9c78693385f7350ab047faf2a9b8799d 165 PIRSF PIRSF006019 3 164 1.2E-45 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TDE_2193 9c78693385f7350ab047faf2a9b8799d 165 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 12 131 7.9E-28 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TDE_2058 fc4f4e61327a168da80a54470b1f9d17 272 Pfam PF10670 Domain of unknown function (DUF4198) 19 246 1.9E-36 T 12-10-2018 IPR019613 Protein of unknown function DUF4198 TDE_2058 fc4f4e61327a168da80a54470b1f9d17 272 SUPERFAMILY SSF49464 177 242 2.47E-6 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TDE_1218 8446a7bcccd4f428a2d1a0e7fe5f8085 474 SUPERFAMILY SSF52540 93 359 1.0E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1218 8446a7bcccd4f428a2d1a0e7fe5f8085 474 Gene3D G3DSA:3.40.50.12240 13 437 8.5E-149 T 12-10-2018 TDE_1218 8446a7bcccd4f428a2d1a0e7fe5f8085 474 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 5 435 1.6E-186 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1218 8446a7bcccd4f428a2d1a0e7fe5f8085 474 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 22 434 5.6E-186 T 12-10-2018 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1218 8446a7bcccd4f428a2d1a0e7fe5f8085 474 SMART SM00382 158 339 7.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1218 8446a7bcccd4f428a2d1a0e7fe5f8085 474 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 355 2.7E-75 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1218 8446a7bcccd4f428a2d1a0e7fe5f8085 474 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 346 355 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1218 8446a7bcccd4f428a2d1a0e7fe5f8085 474 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 30 89 3.7E-5 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_2687 5e88e8927a971cd0920696b903752b94 352 Gene3D G3DSA:3.40.640.10 28 249 5.3E-95 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_2687 5e88e8927a971cd0920696b903752b94 352 Pfam PF00155 Aminotransferase class I and II 16 344 1.2E-38 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TDE_2687 5e88e8927a971cd0920696b903752b94 352 SUPERFAMILY SSF53383 11 346 1.03E-63 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_2687 5e88e8927a971cd0920696b903752b94 352 Gene3D G3DSA:3.90.1150.10 18 346 5.3E-95 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_1201 df8c85315d8aa991d7ab5ed4a6de1cec 377 Pfam PF01098 Cell cycle protein 23 371 3.1E-92 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1201 df8c85315d8aa991d7ab5ed4a6de1cec 377 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 17 369 3.0E-114 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_0722 7257305779c98ce9d471151d31ae673f 421 SUPERFAMILY SSF52096 34 414 4.31E-43 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_0722 7257305779c98ce9d471151d31ae673f 421 Pfam PF03572 Peptidase family S41 182 397 5.2E-23 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TDE_0469 4aac3eb9d8c743136597cd17925fcba4 905 SUPERFAMILY SSF82866 677 879 4.58E-33 T 12-10-2018 TDE_0469 4aac3eb9d8c743136597cd17925fcba4 905 Gene3D G3DSA:1.20.1640.10 205 396 9.7E-18 T 12-10-2018 TDE_0469 4aac3eb9d8c743136597cd17925fcba4 905 Gene3D G3DSA:1.20.1640.10 704 880 1.3E-9 T 12-10-2018 TDE_0469 4aac3eb9d8c743136597cd17925fcba4 905 Pfam PF03176 MMPL family 146 394 1.3E-29 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TDE_0469 4aac3eb9d8c743136597cd17925fcba4 905 Pfam PF03176 MMPL family 665 873 3.4E-19 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TDE_0469 4aac3eb9d8c743136597cd17925fcba4 905 SUPERFAMILY SSF82866 170 387 7.85E-35 T 12-10-2018 TDE_2137 9297b921192f8e663bbc0194293bae82 1834 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1373 1396 7.5E-5 T 12-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming TDE_2137 9297b921192f8e663bbc0194293bae82 1834 Gene3D G3DSA:2.60.40.10 1226 1318 2.0E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_2137 9297b921192f8e663bbc0194293bae82 1834 SUPERFAMILY SSF48239 1371 1616 1.02E-39 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TDE_2137 9297b921192f8e663bbc0194293bae82 1834 SMART SM01360 1173 1262 2.4E-24 T 12-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 TDE_2137 9297b921192f8e663bbc0194293bae82 1834 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 504 598 2.8E-12 T 12-10-2018 TDE_2137 9297b921192f8e663bbc0194293bae82 1834 Gene3D G3DSA:1.50.10.20 1369 1620 4.1E-34 T 12-10-2018 TDE_2137 9297b921192f8e663bbc0194293bae82 1834 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 970 1109 4.2E-11 T 12-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 TDE_2137 9297b921192f8e663bbc0194293bae82 1834 Pfam PF00207 Alpha-2-macroglobulin family 1175 1261 1.0E-15 T 12-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 TDE_2137 9297b921192f8e663bbc0194293bae82 1834 Pfam PF01835 MG2 domain 604 696 6.4E-14 T 12-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 TDE_2137 9297b921192f8e663bbc0194293bae82 1834 SMART SM01359 968 1110 3.8E-30 T 12-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 TDE_0679 45bf743b02204be167fb684129e2a96c 382 SUPERFAMILY SSF53383 1 379 3.99E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_0679 45bf743b02204be167fb684129e2a96c 382 Pfam PF00266 Aminotransferase class-V 2 370 3.5E-74 T 12-10-2018 IPR000192 Aminotransferase class V domain TDE_0679 45bf743b02204be167fb684129e2a96c 382 PIRSF PIRSF005572 1 382 1.1E-48 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TDE_0679 45bf743b02204be167fb684129e2a96c 382 Gene3D G3DSA:3.40.640.10 16 268 6.2E-101 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_0679 45bf743b02204be167fb684129e2a96c 382 Gene3D G3DSA:3.90.1150.10 2 371 6.2E-101 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_0679 45bf743b02204be167fb684129e2a96c 382 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 2 378 5.0E-118 T 12-10-2018 IPR010969 Cysteine desulfurase-related, unknown function TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 293 875 3.5E-256 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 378 534 1.6E-29 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 Gene3D G3DSA:2.40.30.10 778 875 7.1E-31 T 12-10-2018 TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 Gene3D G3DSA:2.40.30.10 547 664 3.1E-38 T 12-10-2018 TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 SUPERFAMILY SSF52540 358 546 2.4E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 14 874 16.98 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 Gene3D G3DSA:3.40.50.300 372 546 1.4E-69 T 12-10-2018 TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 SUPERFAMILY SSF52156 653 783 4.05E-35 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 Pfam PF00009 Elongation factor Tu GTP binding domain 380 536 1.7E-31 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 ProSitePatterns PS01176 Initiation factor 2 signature. 827 849 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 SUPERFAMILY SSF50447 549 630 4.64E-24 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 SUPERFAMILY SSF50447 778 874 1.77E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 Pfam PF11987 Translation-initiation factor 2 661 766 1.4E-35 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 300 350 1.0E-16 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal TDE_1106 6f7dfc443be1a3ab5e741712374ae3f8 896 Gene3D G3DSA:3.40.50.10050 670 777 1.1E-36 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TDE_2251 7269064f6cabcd24e0672fa91bd9c184 420 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 408 1.0E-99 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 TDE_2251 7269064f6cabcd24e0672fa91bd9c184 420 Pfam PF00860 Permease family 20 382 1.2E-78 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 TDE_1624 b1be7fb72b373d0bae4514bfa8bf52b6 482 Pfam PF02347 Glycine cleavage system P-protein 37 292 2.1E-8 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 TDE_1624 b1be7fb72b373d0bae4514bfa8bf52b6 482 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 3 477 56.453 T 12-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 TDE_1624 b1be7fb72b373d0bae4514bfa8bf52b6 482 SUPERFAMILY SSF53383 31 475 6.52E-108 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_1624 b1be7fb72b373d0bae4514bfa8bf52b6 482 Gene3D G3DSA:3.90.1150.10 330 462 6.0E-41 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_1624 b1be7fb72b373d0bae4514bfa8bf52b6 482 Gene3D G3DSA:3.40.640.10 77 308 6.0E-60 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_2302 3e9ae8ecde6fd82128d45408e9093ac4 421 Pfam PF13487 HD domain 239 301 2.7E-15 T 12-10-2018 TDE_2302 3e9ae8ecde6fd82128d45408e9093ac4 421 Gene3D G3DSA:1.10.3210.10 2 350 1.3E-56 T 12-10-2018 TDE_2302 3e9ae8ecde6fd82128d45408e9093ac4 421 Pfam PF11871 Domain of unknown function (DUF3391) 2 155 1.5E-13 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 TDE_2302 3e9ae8ecde6fd82128d45408e9093ac4 421 SUPERFAMILY SSF109604 185 347 9.42E-27 T 12-10-2018 TDE_2302 3e9ae8ecde6fd82128d45408e9093ac4 421 SMART SM00471 183 319 7.1E-4 T 12-10-2018 IPR003607 HD/PDEase domain TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 Gene3D G3DSA:1.10.287.950 447 666 1.9E-42 T 12-10-2018 TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 488 637 1.3E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 SUPERFAMILY SSF58104 430 666 1.14E-45 T 12-10-2018 TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 Gene3D G3DSA:3.30.450.20 201 297 2.0E-31 T 12-10-2018 TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 Pfam PF02743 Cache domain 40 287 5.5E-31 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 Gene3D G3DSA:3.30.450.20 122 200 2.0E-31 T 12-10-2018 TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 SMART SM00283 422 669 9.5E-64 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 Gene3D G3DSA:1.10.287.950 325 439 3.1E-10 T 12-10-2018 TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 SMART SM00304 325 379 3.4E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_2142 f8c170a55cac091ae9c6620c7969939a 712 SUPERFAMILY SSF58104 347 444 7.32E-9 T 12-10-2018 TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 Hamap MF_00900 GTPase HflX [hflX]. 46 388 42.028 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 Gene3D G3DSA:3.40.50.300 225 388 3.0E-38 T 12-10-2018 TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 383 2.1E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 42 385 1.0E-111 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 Gene3D G3DSA:3.40.50.11060 35 157 1.3E-30 T 12-10-2018 TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 Pfam PF13167 GTP-binding GTPase N-terminal 47 131 4.2E-22 T 12-10-2018 IPR025121 GTPase HflX, N-terminal TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 PIRSF PIRSF006809 20 390 6.6E-127 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 SUPERFAMILY SSF52540 225 386 2.87E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 Pfam PF01926 50S ribosome-binding GTPase 225 345 2.9E-16 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_2750 35ab7693a35d1a01e3f40dd779f8013c 391 Pfam PF16360 GTP-binding GTPase Middle Region 133 216 7.4E-24 T 12-10-2018 IPR032305 GTP-binding protein, middle domain TDE_0207 470fa513c8454c4f59de97e70dbe6a1b 451 Pfam PF02447 GntP family permease 7 449 8.7E-88 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 Pfam PF02163 Peptidase family M50 8 432 8.3E-62 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 SUPERFAMILY SSF50156 222 303 2.86E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 SMART SM00228 207 278 3.3E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 SMART SM00228 114 194 0.0024 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 SUPERFAMILY SSF50156 102 202 1.71E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 Gene3D G3DSA:2.30.42.10 144 218 2.5E-16 T 12-10-2018 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 Pfam PF13180 PDZ domain 227 287 1.8E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 Pfam PF13180 PDZ domain 145 198 2.9E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 Gene3D G3DSA:2.30.42.10 220 305 3.4E-15 T 12-10-2018 TDE_2341 c96ba0d426e339713a2d54b9a2fc01e4 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 444 3.5E-87 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 Gene3D G3DSA:1.10.3710.10 356 441 1.2E-25 T 12-10-2018 TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 Pfam PF16193 AAA C-terminal domain 192 275 7.3E-27 T 12-10-2018 IPR032423 AAA C-terminal domain TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 Gene3D G3DSA:3.40.50.300 7 168 1.9E-44 T 12-10-2018 TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 SUPERFAMILY SSF48019 260 432 5.67E-66 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 Gene3D G3DSA:1.20.272.10 249 353 6.4E-45 T 12-10-2018 TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 Pfam PF12002 MgsA AAA+ ATPase C terminal 276 435 9.1E-64 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 SMART SM00382 52 169 6.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 Gene3D G3DSA:1.10.8.60 169 234 2.3E-16 T 12-10-2018 TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 SUPERFAMILY SSF52540 14 241 2.11E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0016 f0b08f73c062e43fb47efa80c3d06123 441 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 56 162 2.6E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_0111 cc50b0cad03ea21bb1fd231a771af1a2 139 Pfam PF04519 Polymer-forming cytoskeletal 12 108 3.4E-23 T 12-10-2018 IPR007607 Bactofilin A/B TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 Gene3D G3DSA:2.40.10.120 63 290 1.2E-64 T 12-10-2018 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 65 485 9.7E-135 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 PRINTS PR00834 HtrA/DegQ protease family signature 152 172 1.9E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 1.9E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 PRINTS PR00834 HtrA/DegQ protease family signature 131 143 1.9E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 PRINTS PR00834 HtrA/DegQ protease family signature 193 217 1.9E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 1.9E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 PRINTS PR00834 HtrA/DegQ protease family signature 337 349 1.9E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 Pfam PF13365 Trypsin-like peptidase domain 119 258 6.1E-30 T 12-10-2018 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 Gene3D G3DSA:2.30.42.10 292 400 1.3E-24 T 12-10-2018 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 SUPERFAMILY SSF50494 63 306 2.47E-51 T 12-10-2018 IPR009003 Peptidase S1, PA clan TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 SUPERFAMILY SSF50156 297 390 4.13E-19 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 SMART SM00228 297 379 2.7E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 SMART SM00228 417 483 3.2E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 SUPERFAMILY SSF50156 403 486 2.37E-13 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 Gene3D G3DSA:2.30.42.10 401 491 4.1E-14 T 12-10-2018 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 Pfam PF13180 PDZ domain 298 387 1.4E-13 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_2300 5a6152ee4e896748ed89f8e92dfd81f1 493 Pfam PF13180 PDZ domain 420 471 5.6E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 TDE_0926 3140aabf1f2923954340bbdb4314c609 271 SUPERFAMILY SSF161098 74 259 4.97E-29 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0926 3140aabf1f2923954340bbdb4314c609 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 257 4.8E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0926 3140aabf1f2923954340bbdb4314c609 271 Gene3D G3DSA:1.10.3720.10 72 271 4.8E-31 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1897 b3ae92389967465b331346763bbcc6cb 194 SUPERFAMILY SSF53328 3 191 1.83E-45 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TDE_1897 b3ae92389967465b331346763bbcc6cb 194 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 194 25.322 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 TDE_1897 b3ae92389967465b331346763bbcc6cb 194 Pfam PF00551 Formyl transferase 3 187 1.4E-45 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TDE_1897 b3ae92389967465b331346763bbcc6cb 194 Gene3D G3DSA:3.40.50.170 1 194 9.7E-67 T 12-10-2018 TDE_1897 b3ae92389967465b331346763bbcc6cb 194 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 191 3.9E-57 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 TDE_1749 3484480c895da222c14545378b16738d 83 Gene3D G3DSA:2.40.50.100 21 83 8.6E-27 T 12-10-2018 TDE_1749 3484480c895da222c14545378b16738d 83 Pfam PF01016 Ribosomal L27 protein 2 80 7.8E-35 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1749 3484480c895da222c14545378b16738d 83 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 70 5.0E-19 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1749 3484480c895da222c14545378b16738d 83 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 25.16 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1749 3484480c895da222c14545378b16738d 83 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.6E-34 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1749 3484480c895da222c14545378b16738d 83 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.6E-34 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1749 3484480c895da222c14545378b16738d 83 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.6E-34 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1749 3484480c895da222c14545378b16738d 83 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 77 1.1E-31 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1749 3484480c895da222c14545378b16738d 83 SUPERFAMILY SSF110324 2 77 2.96E-29 T 12-10-2018 TDE_1749 3484480c895da222c14545378b16738d 83 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0588 74b7fb0133ce0a4e8e24a2868563113f 507 Gene3D G3DSA:1.20.200.10 200 506 2.0E-126 T 12-10-2018 TDE_0588 74b7fb0133ce0a4e8e24a2868563113f 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 141 157 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 TDE_0588 74b7fb0133ce0a4e8e24a2868563113f 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 5 504 45.492 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_0588 74b7fb0133ce0a4e8e24a2868563113f 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 503 2.2E-208 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_0588 74b7fb0133ce0a4e8e24a2868563113f 507 Pfam PF00221 Aromatic amino acid lyase 13 471 9.8E-202 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 TDE_0588 74b7fb0133ce0a4e8e24a2868563113f 507 SUPERFAMILY SSF48557 4 497 4.0E-201 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 TDE_0588 74b7fb0133ce0a4e8e24a2868563113f 507 Gene3D G3DSA:1.10.275.10 1 199 2.4E-71 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 Pfam PF00664 ABC transporter transmembrane region 170 436 3.0E-37 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 Gene3D G3DSA:3.40.50.300 473 720 6.3E-85 T 12-10-2018 TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 Pfam PF03412 Peptidase C39 family 9 140 3.9E-36 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 ProSitePatterns PS00211 ABC transporters family signature. 619 633 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 Gene3D G3DSA:3.90.70.10 2 148 3.7E-46 T 12-10-2018 TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 SUPERFAMILY SSF52540 473 717 7.78E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 SMART SM00382 507 692 1.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 Gene3D G3DSA:1.20.1560.10 150 467 2.2E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 Pfam PF00005 ABC transporter 498 647 1.0E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 SUPERFAMILY SSF90123 154 465 1.27E-64 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0425 4c512a79a873c868ef5484a3ca8e926b 721 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 13 715 1.3E-177 T 12-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 TDE_1305 15edc4bc0f790f44275491f5b9ac89c7 72 Gene3D G3DSA:1.10.260.40 5 72 6.1E-15 T 12-10-2018 TDE_1305 15edc4bc0f790f44275491f5b9ac89c7 72 SMART SM00530 16 71 1.3E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1305 15edc4bc0f790f44275491f5b9ac89c7 72 SUPERFAMILY SSF47413 9 71 3.75E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_1305 15edc4bc0f790f44275491f5b9ac89c7 72 Pfam PF01381 Helix-turn-helix 17 68 7.2E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_0145 c38aae0d242b616a718de5fc7d3b5993 210 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0145 c38aae0d242b616a718de5fc7d3b5993 210 SMART SM00382 30 210 2.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0145 c38aae0d242b616a718de5fc7d3b5993 210 Pfam PF00005 ABC transporter 24 163 1.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0145 c38aae0d242b616a718de5fc7d3b5993 210 SUPERFAMILY SSF52540 8 209 6.92E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0145 c38aae0d242b616a718de5fc7d3b5993 210 Gene3D G3DSA:3.40.50.300 2 210 2.3E-61 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR01159 DNA gyrase subunit B signature 289 305 3.6E-7 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR01159 DNA gyrase subunit B signature 576 592 3.6E-7 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR01159 DNA gyrase subunit B signature 337 351 3.6E-7 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR01159 DNA gyrase subunit B signature 8 18 3.6E-7 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 539 595 1.1E-6 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 SUPERFAMILY SSF55874 8 207 1.83E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 SUPERFAMILY SSF54211 225 366 9.67E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 Gene3D G3DSA:3.30.230.10 218 368 1.2E-38 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 Gene3D G3DSA:3.40.50.670 377 605 3.5E-61 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 SUPERFAMILY SSF56719 377 597 2.14E-56 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 SMART SM00433 42 600 1.7E-169 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR00418 DNA topoisomerase II family signature 463 479 2.2E-48 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR00418 DNA topoisomerase II family signature 481 498 2.2E-48 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR00418 DNA topoisomerase II family signature 501 513 2.2E-48 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR00418 DNA topoisomerase II family signature 111 125 2.2E-48 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR00418 DNA topoisomerase II family signature 401 415 2.2E-48 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR00418 DNA topoisomerase II family signature 254 267 2.2E-48 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR00418 DNA topoisomerase II family signature 42 57 2.2E-48 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR00418 DNA topoisomerase II family signature 541 557 2.2E-48 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 PRINTS PR00418 DNA topoisomerase II family signature 76 89 2.2E-48 T 12-10-2018 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 ProSitePatterns PS00177 DNA topoisomerase II signature. 403 411 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 149 3.2E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 Pfam PF00204 DNA gyrase B 231 365 9.5E-33 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 Pfam PF01751 Toprim domain 401 506 6.4E-11 T 12-10-2018 IPR006171 TOPRIM domain TDE_2245 d8d53b55225c9c66f884ec3bad07b853 605 Gene3D G3DSA:3.30.565.10 11 212 1.1E-53 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0028 f04fb4130625c90166049ae56ad93ee1 624 ProSitePatterns PS00211 ABC transporters family signature. 511 525 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0028 f04fb4130625c90166049ae56ad93ee1 624 SUPERFAMILY SSF90123 251 523 1.57E-6 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0028 f04fb4130625c90166049ae56ad93ee1 624 SUPERFAMILY SSF90123 23 214 3.79E-5 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0028 f04fb4130625c90166049ae56ad93ee1 624 SMART SM00382 396 584 5.7E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0028 f04fb4130625c90166049ae56ad93ee1 624 Pfam PF00005 ABC transporter 387 539 4.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0028 f04fb4130625c90166049ae56ad93ee1 624 SUPERFAMILY SSF52540 366 610 3.39E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0028 f04fb4130625c90166049ae56ad93ee1 624 Gene3D G3DSA:3.40.50.300 362 622 4.8E-72 T 12-10-2018 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 Gene3D G3DSA:3.30.54.20 523 576 3.0E-52 T 12-10-2018 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 600 96.932 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 SUPERFAMILY SSF101353 252 449 3.27E-61 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 Gene3D G3DSA:3.30.930.10 4 246 8.0E-100 T 12-10-2018 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 SMART SM00863 552 595 1.5E-15 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 Gene3D G3DSA:3.30.980.10 462 596 3.0E-52 T 12-10-2018 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 9 446 1.1E-141 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 SUPERFAMILY SSF55186 459 598 4.58E-48 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 552 594 3.8E-14 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 204 215 5.4E-25 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 231 244 5.4E-25 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 5.4E-25 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 307 320 5.4E-25 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 5.4E-25 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 SUPERFAMILY SSF55681 6 250 2.49E-78 T 12-10-2018 TDE_1659 b723de7f0701ee77ddcd99aa3f5d1d07 600 Pfam PF01411 tRNA synthetases class II (A) 9 459 2.7E-142 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TDE_1338 47f253108cc9d892555808f034698645 284 Pfam PF00288 GHMP kinases N terminal domain 89 142 7.8E-8 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TDE_1338 47f253108cc9d892555808f034698645 284 PIRSF PIRSF010376 4 280 1.2E-76 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TDE_1338 47f253108cc9d892555808f034698645 284 SUPERFAMILY SSF54211 6 157 4.93E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_1338 47f253108cc9d892555808f034698645 284 Gene3D G3DSA:3.30.230.10 1 161 5.4E-52 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_1338 47f253108cc9d892555808f034698645 284 Gene3D G3DSA:3.30.70.890 165 279 2.8E-21 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TDE_1338 47f253108cc9d892555808f034698645 284 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 6 267 1.0E-53 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TDE_1338 47f253108cc9d892555808f034698645 284 Pfam PF08544 GHMP kinases C terminal 219 273 4.0E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain TDE_1338 47f253108cc9d892555808f034698645 284 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 284 31.339 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TDE_1338 47f253108cc9d892555808f034698645 284 SUPERFAMILY SSF55060 164 280 1.37E-20 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TDE_2602 b79dd95059f55f318af32c7c7f1bcb5e 175 Gene3D G3DSA:3.30.910.20 14 175 3.5E-19 T 12-10-2018 IPR024930 Skp domain superfamily TDE_2602 b79dd95059f55f318af32c7c7f1bcb5e 175 SUPERFAMILY SSF111384 23 170 2.35E-22 T 12-10-2018 TDE_2602 b79dd95059f55f318af32c7c7f1bcb5e 175 SMART SM00935 11 171 8.7E-23 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TDE_2602 b79dd95059f55f318af32c7c7f1bcb5e 175 Pfam PF03938 Outer membrane protein (OmpH-like) 12 170 2.3E-19 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TDE_0968 333e59aa23715664a2fc631d2becae89 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 121 3.9E-21 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TDE_0968 333e59aa23715664a2fc631d2becae89 187 PIRSF PIRSF005901 1 186 1.5E-67 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP TDE_0968 333e59aa23715664a2fc631d2becae89 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 60 1.9E-18 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like TDE_0968 333e59aa23715664a2fc631d2becae89 187 SUPERFAMILY SSF50249 65 127 2.48E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_0968 333e59aa23715664a2fc631d2becae89 187 SUPERFAMILY SSF50104 1 62 1.93E-15 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily TDE_0968 333e59aa23715664a2fc631d2becae89 187 Gene3D G3DSA:2.30.30.30 1 63 1.5E-18 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 TDE_0968 333e59aa23715664a2fc631d2becae89 187 Pfam PF09285 Elongation factor P, C-terminal 133 184 4.9E-21 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TDE_0968 333e59aa23715664a2fc631d2becae89 187 SUPERFAMILY SSF50249 131 185 1.01E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_0968 333e59aa23715664a2fc631d2becae89 187 Hamap MF_00141 Elongation factor P [efp]. 1 185 45.715 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TDE_0968 333e59aa23715664a2fc631d2becae89 187 SMART SM00841 129 184 2.5E-24 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TDE_0968 333e59aa23715664a2fc631d2becae89 187 SMART SM01185 67 121 6.3E-23 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TDE_0968 333e59aa23715664a2fc631d2becae89 187 Gene3D G3DSA:2.40.50.140 129 187 1.4E-21 T 12-10-2018 TDE_0968 333e59aa23715664a2fc631d2becae89 187 Gene3D G3DSA:2.40.50.140 64 127 4.9E-22 T 12-10-2018 TDE_0968 333e59aa23715664a2fc631d2becae89 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 3.9E-69 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TDE_2651 4a0252ac99127ec6713b0bae6f7ce05f 329 SMART SM00382 47 232 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2651 4a0252ac99127ec6713b0bae6f7ce05f 329 Gene3D G3DSA:3.40.50.300 1 303 1.2E-59 T 12-10-2018 TDE_2651 4a0252ac99127ec6713b0bae6f7ce05f 329 Pfam PF00005 ABC transporter 38 182 2.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2651 4a0252ac99127ec6713b0bae6f7ce05f 329 SUPERFAMILY SSF52540 30 249 1.11E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0795 41eaeb35c8d95c4319fe1ebc2697fb8b 128 PIRSF PIRSF032441 1 128 1.5E-54 T 12-10-2018 IPR016996 Uncharacterised conserved protein UCP032441 TDE_0795 41eaeb35c8d95c4319fe1ebc2697fb8b 128 Pfam PF08349 Protein of unknown function (DUF1722) 16 124 5.0E-26 T 12-10-2018 IPR013560 Domain of unknown function DUF1722 TDE_1589 74cd7558c15a3722baaea49643654e23 168 Pfam PF01584 CheW-like domain 21 158 7.7E-32 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TDE_1589 74cd7558c15a3722baaea49643654e23 168 Gene3D G3DSA:2.30.30.40 22 151 6.1E-37 T 12-10-2018 TDE_1589 74cd7558c15a3722baaea49643654e23 168 Gene3D G3DSA:2.40.50.180 39 152 6.1E-37 T 12-10-2018 TDE_1589 74cd7558c15a3722baaea49643654e23 168 SUPERFAMILY SSF50341 16 160 3.79E-34 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TDE_1589 74cd7558c15a3722baaea49643654e23 168 SMART SM00260 16 157 8.6E-37 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TDE_1348 906039139eaa468db7efd8759bdf51ba 311 SUPERFAMILY SSF48452 112 300 1.93E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1348 906039139eaa468db7efd8759bdf51ba 311 SMART SM00028 235 268 67.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1348 906039139eaa468db7efd8759bdf51ba 311 SMART SM00028 165 198 0.28 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1348 906039139eaa468db7efd8759bdf51ba 311 SMART SM00028 269 302 8.8E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1348 906039139eaa468db7efd8759bdf51ba 311 Pfam PF13414 TPR repeat 242 283 7.8E-7 T 12-10-2018 TDE_1348 906039139eaa468db7efd8759bdf51ba 311 Pfam PF13432 Tetratricopeptide repeat 148 198 0.017 T 12-10-2018 TDE_1348 906039139eaa468db7efd8759bdf51ba 311 Gene3D G3DSA:1.25.40.10 52 311 2.1E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2617 350153f854e13236ea2f02bc10d492a9 333 SUPERFAMILY SSF48452 207 312 9.66E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2617 350153f854e13236ea2f02bc10d492a9 333 Gene3D G3DSA:2.60.120.10 5 111 6.7E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_2617 350153f854e13236ea2f02bc10d492a9 333 SMART SM00028 207 240 95.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2617 350153f854e13236ea2f02bc10d492a9 333 SMART SM00028 281 314 0.0036 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2617 350153f854e13236ea2f02bc10d492a9 333 Gene3D G3DSA:1.25.40.10 208 323 4.9E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2617 350153f854e13236ea2f02bc10d492a9 333 Pfam PF00027 Cyclic nucleotide-binding domain 6 92 2.5E-14 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_2617 350153f854e13236ea2f02bc10d492a9 333 SUPERFAMILY SSF51206 5 116 3.67E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_2617 350153f854e13236ea2f02bc10d492a9 333 Pfam PF13432 Tetratricopeptide repeat 266 308 0.012 T 12-10-2018 TDE_0399 1a98aa9829a4a75775b773e476720eca 445 Gene3D G3DSA:3.40.630.10 1 268 1.2E-22 T 12-10-2018 TDE_0399 1a98aa9829a4a75775b773e476720eca 445 Pfam PF00246 Zinc carboxypeptidase 7 174 6.7E-11 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 TDE_0399 1a98aa9829a4a75775b773e476720eca 445 SUPERFAMILY SSF53187 2 266 1.72E-27 T 12-10-2018 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 Gene3D G3DSA:1.10.287.380 840 908 1.3E-16 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 23 570 9.8E-210 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 SUPERFAMILY SSF50677 200 361 2.09E-58 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 PRINTS PR00986 Valyl-tRNA synthetase signature 494 512 5.1E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 PRINTS PR00986 Valyl-tRNA synthetase signature 249 266 5.1E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 PRINTS PR00986 Valyl-tRNA synthetase signature 365 378 5.1E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 PRINTS PR00986 Valyl-tRNA synthetase signature 463 484 5.1E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 PRINTS PR00986 Valyl-tRNA synthetase signature 45 56 5.1E-36 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 SUPERFAMILY SSF52374 8 588 2.51E-144 T 12-10-2018 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 Gene3D G3DSA:1.10.730.10 10 771 0.0 T 12-10-2018 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 Pfam PF08264 Anticodon-binding domain of tRNA 629 783 2.1E-37 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 Gene3D G3DSA:3.40.50.620 30 543 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 Hamap MF_02004 Valine--tRNA ligase [valS]. 10 909 15.545 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 Gene3D G3DSA:3.90.740.10 184 361 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 TIGRFAM TIGR00422 valS: valine--tRNA ligase 11 891 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 SUPERFAMILY SSF46589 844 908 1.1E-14 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 52 63 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 844 908 6.7E-15 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 TDE_1364 7c5b83b957eb26cdcadee26ed0ce6b26 909 SUPERFAMILY SSF47323 595 858 1.14E-56 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 14 475 2.9E-131 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 SUPERFAMILY SSF53623 104 304 2.49E-38 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 Pfam PF01225 Mur ligase family, catalytic domain 14 116 5.0E-17 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 Pfam PF08245 Mur ligase middle domain 120 301 3.2E-16 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 SUPERFAMILY SSF51984 14 96 1.44E-17 T 12-10-2018 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 416 1.9E-19 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 SUPERFAMILY SSF53244 330 477 6.78E-37 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 Gene3D G3DSA:3.40.1190.10 105 328 7.8E-44 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 Gene3D G3DSA:3.40.50.720 8 103 1.1E-20 T 12-10-2018 TDE_1085 1a8af4ae4b06c01dcd8c161413d0a8a9 480 Gene3D G3DSA:3.90.190.20 329 480 7.9E-49 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_2777 2b25e5f1e81cbf5b806b87aa8f511b2e 319 Gene3D G3DSA:3.40.50.1820 32 297 9.6E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2777 2b25e5f1e81cbf5b806b87aa8f511b2e 319 Pfam PF07224 Chlorophyllase 44 170 4.2E-5 T 12-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 TDE_2777 2b25e5f1e81cbf5b806b87aa8f511b2e 319 SUPERFAMILY SSF53474 45 299 1.1E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2754 c83690741392b5dd62c6439eb3cbf741 339 PIRSF PIRSF001439 25 324 4.5E-47 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 TDE_2754 c83690741392b5dd62c6439eb3cbf741 339 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 14 316 8.8E-91 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 TDE_2754 c83690741392b5dd62c6439eb3cbf741 339 Gene3D G3DSA:3.30.1780.10 19 335 1.4E-117 T 12-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 TDE_2754 c83690741392b5dd62c6439eb3cbf741 339 Gene3D G3DSA:3.40.50.720 128 297 1.4E-117 T 12-10-2018 TDE_2754 c83690741392b5dd62c6439eb3cbf741 339 SUPERFAMILY SSF51735 3 338 3.73E-89 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_1683 3b3e48a74455177225287f41fdfd415c 589 Gene3D G3DSA:2.40.30.20 3 75 1.4E-11 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1683 3b3e48a74455177225287f41fdfd415c 589 Gene3D G3DSA:3.40.50.300 77 438 1.0E-155 T 12-10-2018 TDE_1683 3b3e48a74455177225287f41fdfd415c 589 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 220 440 9.8E-76 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1683 3b3e48a74455177225287f41fdfd415c 589 Gene3D G3DSA:2.40.50.100 119 191 1.0E-155 T 12-10-2018 TDE_1683 3b3e48a74455177225287f41fdfd415c 589 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 3 577 44.794 T 12-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TDE_1683 3b3e48a74455177225287f41fdfd415c 589 SUPERFAMILY SSF52540 172 444 3.71E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1683 3b3e48a74455177225287f41fdfd415c 589 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 431 440 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1683 3b3e48a74455177225287f41fdfd415c 589 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 88 209 1.2E-35 T 12-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TDE_1683 3b3e48a74455177225287f41fdfd415c 589 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 72 3.2E-8 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1683 3b3e48a74455177225287f41fdfd415c 589 Gene3D G3DSA:1.10.1140.10 439 578 1.4E-14 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 588 604 1.9E-5 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 619 644 1.9E-5 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 Pfam PF00702 haloacid dehalogenase-like hydrolase 382 602 2.4E-39 T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 243 257 2.0E-25 T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 588 607 2.0E-25 T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 611 623 2.0E-25 T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 385 399 2.0E-25 T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 545 2.0E-25 T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 523 2.0E-25 T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 144 689 1.4E-145 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 166 661 6.4E-70 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 Gene3D G3DSA:3.40.1110.10 396 519 2.6E-80 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 Pfam PF00122 E1-E2 ATPase 195 365 4.6E-37 T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 SUPERFAMILY SSF81653 197 293 1.44E-25 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 ProSitePatterns PS01229 Hypothetical cof family signature 2. 588 610 - T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 Gene3D G3DSA:3.40.50.1000 366 637 2.6E-80 T 12-10-2018 IPR023214 HAD superfamily TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 387 393 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 Gene3D G3DSA:2.70.150.20 190 298 1.6E-29 T 12-10-2018 TDE_0473 6ba15a4f6ed86f22c2036e9ee2e3769d 699 SUPERFAMILY SSF56784 383 686 8.25E-46 T 12-10-2018 IPR036412 HAD-like superfamily TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 765 783 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 SUPERFAMILY SSF56059 4 359 9.65E-42 T 12-10-2018 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 437 448 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 PIRSF PIRSF000853 3 881 1.1E-262 T 12-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 873 4.8E-81 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 Gene3D G3DSA:1.10.189.10 327 505 7.4E-29 T 12-10-2018 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 Gene3D G3DSA:3.20.20.60 521 873 9.5E-136 T 12-10-2018 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 Gene3D G3DSA:3.30.1490.20 18 208 2.3E-11 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 Gene3D G3DSA:3.30.470.20 231 320 3.9E-11 T 12-10-2018 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 Gene3D G3DSA:3.50.30.10 364 494 7.4E-29 T 12-10-2018 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 Gene3D G3DSA:1.20.80.30 109 193 2.3E-11 T 12-10-2018 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 Pfam PF00391 PEP-utilising enzyme, mobile domain 409 483 4.0E-8 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 SUPERFAMILY SSF51621 522 875 4.57E-107 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TDE_0844 7c2889dda08c925b62db40ac164fcbc9 935 SUPERFAMILY SSF52009 376 483 9.16E-13 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TDE_0495 635285fd664d6ce2fcfe027969bd5441 109 Pfam PF13657 HipA N-terminal domain 8 104 2.7E-25 T 12-10-2018 IPR017508 HipA, N-terminal subdomain 1 TDE_0495 635285fd664d6ce2fcfe027969bd5441 109 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 104 6.5E-28 T 12-10-2018 IPR017508 HipA, N-terminal subdomain 1 TDE_1246 cdd14dbca08cc2dc0229ed48fe1795d0 842 SUPERFAMILY SSF51126 394 740 6.07E-13 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_1246 cdd14dbca08cc2dc0229ed48fe1795d0 842 Gene3D G3DSA:2.160.20.20 404 797 9.0E-6 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TDE_1246 cdd14dbca08cc2dc0229ed48fe1795d0 842 Pfam PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat 530 545 0.077 T 12-10-2018 IPR003368 Polymorphic outer membrane protein repeat TDE_1246 cdd14dbca08cc2dc0229ed48fe1795d0 842 SMART SM00710 497 523 140.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1246 cdd14dbca08cc2dc0229ed48fe1795d0 842 SMART SM00710 553 585 3900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1246 cdd14dbca08cc2dc0229ed48fe1795d0 842 SMART SM00710 528 548 240.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1246 cdd14dbca08cc2dc0229ed48fe1795d0 842 SMART SM00710 599 619 7600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1246 cdd14dbca08cc2dc0229ed48fe1795d0 842 SMART SM00710 465 496 7400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1176 f1a31560e74340dd923b26b128dbfde9 422 SUPERFAMILY SSF102114 42 417 5.23E-74 T 12-10-2018 TDE_1176 f1a31560e74340dd923b26b128dbfde9 422 Pfam PF04055 Radical SAM superfamily 53 220 9.8E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_1176 f1a31560e74340dd923b26b128dbfde9 422 SMART SM00729 48 268 8.0E-42 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_1176 f1a31560e74340dd923b26b128dbfde9 422 Gene3D G3DSA:3.80.30.20 13 343 2.4E-75 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TDE_0896 14a6d46be9f3ae9442b3e2dab3b0161e 595 Pfam PF00005 ABC transporter 362 509 3.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0896 14a6d46be9f3ae9442b3e2dab3b0161e 595 Pfam PF00664 ABC transporter transmembrane region 23 289 1.1E-22 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0896 14a6d46be9f3ae9442b3e2dab3b0161e 595 Gene3D G3DSA:3.40.50.300 328 583 6.9E-83 T 12-10-2018 TDE_0896 14a6d46be9f3ae9442b3e2dab3b0161e 595 SUPERFAMILY SSF52540 338 581 7.39E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0896 14a6d46be9f3ae9442b3e2dab3b0161e 595 Gene3D G3DSA:1.20.1560.10 1 327 1.7E-42 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0896 14a6d46be9f3ae9442b3e2dab3b0161e 595 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0896 14a6d46be9f3ae9442b3e2dab3b0161e 595 SMART SM00382 371 556 5.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0896 14a6d46be9f3ae9442b3e2dab3b0161e 595 SUPERFAMILY SSF90123 13 325 2.75E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2209 cbe98307316280792a1ffd2291802d16 543 SUPERFAMILY SSF52440 6 52 4.89E-5 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TDE_2209 cbe98307316280792a1ffd2291802d16 543 Pfam PF02655 ATP-grasp domain 91 232 9.4E-9 T 12-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 TDE_2209 cbe98307316280792a1ffd2291802d16 543 Gene3D G3DSA:3.30.1490.20 109 178 1.9E-7 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TDE_2209 cbe98307316280792a1ffd2291802d16 543 Gene3D G3DSA:3.30.470.20 179 405 2.8E-29 T 12-10-2018 TDE_2209 cbe98307316280792a1ffd2291802d16 543 Gene3D G3DSA:3.40.50.20 1 107 8.3E-29 T 12-10-2018 TDE_2209 cbe98307316280792a1ffd2291802d16 543 SUPERFAMILY SSF56059 73 312 9.9E-32 T 12-10-2018 TDE_0785 a537c10c9cae768d6d2e7b3fdccc55e4 61 Gene3D G3DSA:3.30.1390.20 1 59 1.4E-22 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TDE_0785 a537c10c9cae768d6d2e7b3fdccc55e4 61 SUPERFAMILY SSF55129 3 60 1.14E-17 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TDE_0785 a537c10c9cae768d6d2e7b3fdccc55e4 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 5.7E-20 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0785 a537c10c9cae768d6d2e7b3fdccc55e4 61 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site TDE_0785 a537c10c9cae768d6d2e7b3fdccc55e4 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 16.69 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0785 a537c10c9cae768d6d2e7b3fdccc55e4 61 PIRSF PIRSF002211 1 61 1.0E-25 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0785 a537c10c9cae768d6d2e7b3fdccc55e4 61 Pfam PF00327 Ribosomal protein L30p/L7e 7 55 1.2E-16 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain TDE_2131 87cfbf3435dec48b484c19c121f2e5ec 197 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 192 3.0E-46 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 TDE_2131 87cfbf3435dec48b484c19c121f2e5ec 197 Gene3D G3DSA:1.10.1760.20 1 192 6.7E-36 T 12-10-2018 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1100 14.356 T 12-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 Gene3D G3DSA:1.10.730.10 668 864 3.5E-51 T 12-10-2018 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 SUPERFAMILY SSF50677 201 423 1.44E-48 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 6.0E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 545 558 6.0E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 421 436 6.0E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 585 594 6.0E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 41 52 6.0E-31 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 Gene3D G3DSA:3.90.740.10 198 427 8.6E-248 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 SUPERFAMILY SSF52374 6 674 2.82E-144 T 12-10-2018 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 Pfam PF08264 Anticodon-binding domain of tRNA 725 874 2.8E-29 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 662 6.6E-205 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 7 886 1.0E-301 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 SUPERFAMILY SSF47323 682 934 1.4E-49 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2663 3b565335ec4ea9298b01a238c11b5c44 1100 Gene3D G3DSA:3.40.50.620 15 652 8.6E-248 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 SUPERFAMILY SSF64518 1 286 3.53E-80 T 12-10-2018 TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 Gene3D G3DSA:1.20.58.1830 3 31 3.7E-58 T 12-10-2018 TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 Gene3D G3DSA:1.10.8.410 236 286 2.3E-24 T 12-10-2018 TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 Gene3D G3DSA:1.20.1330.10 188 235 4.6E-7 T 12-10-2018 TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 7.9E-37 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 PRINTS PR00207 Flagellin signature 74 93 5.2E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 PRINTS PR00207 Flagellin signature 35 52 5.2E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 PRINTS PR00207 Flagellin signature 109 132 5.2E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 Gene3D G3DSA:1.20.1330.10 43 182 3.7E-58 T 12-10-2018 TDE_1477 23e5ded584f27e37b748ef0f4a4f25a7 286 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 285 1.6E-23 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TDE_1633 a7d63b93b8027af4868b2d1193aa01d4 87 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 86 5.7E-28 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TDE_1633 a7d63b93b8027af4868b2d1193aa01d4 87 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 86 21.732 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TDE_1633 a7d63b93b8027af4868b2d1193aa01d4 87 PIRSF PIRSF002736 1 87 3.1E-36 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TDE_1633 a7d63b93b8027af4868b2d1193aa01d4 87 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 84 1.7E-29 T 12-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein TDE_1633 a7d63b93b8027af4868b2d1193aa01d4 87 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 80 3.0E-34 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TDE_2404 33640a6bee7c78a35dd49eda3620d1ed 463 Pfam PF04963 Sigma-54 factor, core binding domain 79 285 2.5E-30 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 TDE_2404 33640a6bee7c78a35dd49eda3620d1ed 463 Pfam PF04552 Sigma-54, DNA binding domain 299 462 1.7E-34 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding TDE_2404 33640a6bee7c78a35dd49eda3620d1ed 463 PRINTS PR00045 Sigma-54 factor signature 439 457 2.2E-6 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TDE_2404 33640a6bee7c78a35dd49eda3620d1ed 463 PRINTS PR00045 Sigma-54 factor signature 150 167 2.2E-6 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TDE_2404 33640a6bee7c78a35dd49eda3620d1ed 463 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 462 3.1E-86 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TDE_2404 33640a6bee7c78a35dd49eda3620d1ed 463 PIRSF PIRSF000774 1 463 4.6E-142 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TDE_2404 33640a6bee7c78a35dd49eda3620d1ed 463 Gene3D G3DSA:1.10.10.1330 80 237 3.2E-9 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily TDE_2404 33640a6bee7c78a35dd49eda3620d1ed 463 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 49 3.6E-10 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TDE_2404 33640a6bee7c78a35dd49eda3620d1ed 463 Gene3D G3DSA:1.10.10.60 408 463 4.0E-14 T 12-10-2018 TDE_0644 3a013ca07da945ad347e6160a9bd3ae8 245 Pfam PF00005 ABC transporter 24 170 5.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0644 3a013ca07da945ad347e6160a9bd3ae8 245 SMART SM00382 32 243 1.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0644 3a013ca07da945ad347e6160a9bd3ae8 245 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 8 245 2.1E-110 T 12-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 TDE_0644 3a013ca07da945ad347e6160a9bd3ae8 245 SUPERFAMILY SSF52540 7 237 9.58E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0644 3a013ca07da945ad347e6160a9bd3ae8 245 Gene3D G3DSA:3.40.50.300 6 245 6.9E-67 T 12-10-2018 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 Gene3D G3DSA:1.25.40.10 21 118 2.8E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 Pfam PF00515 Tetratricopeptide repeat 75 106 3.3E-8 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SMART SM00028 245 278 0.0053 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SMART SM00028 74 107 3.8E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SMART SM00028 40 73 1.4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SMART SM00028 142 175 0.064 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SMART SM00028 210 243 460.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SMART SM00028 279 312 2.1E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SMART SM00028 108 141 0.0076 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SMART SM00028 176 209 6.5E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 Pfam PF13181 Tetratricopeptide repeat 279 309 0.0022 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 Pfam PF13181 Tetratricopeptide repeat 109 140 4.7E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 Pfam PF13181 Tetratricopeptide repeat 42 72 0.14 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SUPERFAMILY SSF48452 112 309 9.1E-40 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 Pfam PF13432 Tetratricopeptide repeat 148 208 9.8E-5 T 12-10-2018 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 SUPERFAMILY SSF48452 34 153 5.87E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 Gene3D G3DSA:1.25.40.10 119 213 1.6E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0430 1ab433cb4ad1941a0985b83b06137363 338 Gene3D G3DSA:1.25.40.10 214 338 2.5E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0897 c6d6ad8998d4281fc4c44159e1b71fcd 581 SUPERFAMILY SSF90123 12 319 5.62E-44 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0897 c6d6ad8998d4281fc4c44159e1b71fcd 581 Gene3D G3DSA:1.20.1560.10 7 322 1.7E-38 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0897 c6d6ad8998d4281fc4c44159e1b71fcd 581 SMART SM00382 361 547 2.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0897 c6d6ad8998d4281fc4c44159e1b71fcd 581 Pfam PF00664 ABC transporter transmembrane region 35 283 1.3E-22 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0897 c6d6ad8998d4281fc4c44159e1b71fcd 581 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0897 c6d6ad8998d4281fc4c44159e1b71fcd 581 Pfam PF00005 ABC transporter 353 501 4.9E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0897 c6d6ad8998d4281fc4c44159e1b71fcd 581 Gene3D G3DSA:3.40.50.300 327 579 1.1E-90 T 12-10-2018 TDE_0897 c6d6ad8998d4281fc4c44159e1b71fcd 581 SUPERFAMILY SSF52540 333 571 2.89E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 Pfam PF00318 Ribosomal protein S2 9 224 5.6E-99 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 SUPERFAMILY SSF52313 6 228 3.4E-95 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 PRINTS PR00395 Ribosomal protein S2 signature 158 175 6.5E-40 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 PRINTS PR00395 Ribosomal protein S2 signature 175 186 6.5E-40 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 PRINTS PR00395 Ribosomal protein S2 signature 196 210 6.5E-40 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 PRINTS PR00395 Ribosomal protein S2 signature 6 24 6.5E-40 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 PRINTS PR00395 Ribosomal protein S2 signature 87 104 6.5E-40 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 PRINTS PR00395 Ribosomal protein S2 signature 37 46 6.5E-40 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 Gene3D G3DSA:3.40.50.10490 9 219 5.5E-92 T 12-10-2018 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 230 43.104 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 Gene3D G3DSA:1.10.287.610 103 150 5.5E-92 T 12-10-2018 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.4E-113 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2347 ea2955e9af2320dac2bf5ffed700a368 291 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TDE_1339 ad8d2b586e9648a57dd292c96c0d43a4 93 Pfam PF04026 SpoVG 1 82 2.0E-34 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 TDE_1339 ad8d2b586e9648a57dd292c96c0d43a4 93 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 91 27.147 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 TDE_1339 ad8d2b586e9648a57dd292c96c0d43a4 93 SUPERFAMILY SSF160537 1 87 9.94E-33 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 TDE_1339 ad8d2b586e9648a57dd292c96c0d43a4 93 Gene3D G3DSA:3.30.1120.40 1 92 2.1E-34 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 TDE_1696 41c0ea9c4e3737e0c882718e3d499a7f 493 Pfam PF07171 MlrC C-terminus 306 475 3.6E-41 T 12-10-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal TDE_1696 41c0ea9c4e3737e0c882718e3d499a7f 493 PIRSF PIRSF012702 1 493 1.6E-149 T 12-10-2018 IPR009197 Microcystin LR degradation protein MlrC TDE_1696 41c0ea9c4e3737e0c882718e3d499a7f 493 Pfam PF07364 Metallopeptidase family M81 3 284 1.1E-88 T 12-10-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal TDE_1676 4223986882bc964a5ee6e0389256b1af 89 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 36 86 7.0E-23 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 18 88 22.208 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 SUPERFAMILY SSF46911 16 88 8.76E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 Pfam PF01084 Ribosomal protein S18 33 83 2.2E-27 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 PRINTS PR00974 Ribosomal protein S18 family signature 43 53 7.4E-20 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 PRINTS PR00974 Ribosomal protein S18 family signature 53 60 7.4E-20 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 PRINTS PR00974 Ribosomal protein S18 family signature 61 75 7.4E-20 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 PRINTS PR00974 Ribosomal protein S18 family signature 75 85 7.4E-20 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 ProSitePatterns PS00057 Ribosomal protein S18 signature. 36 59 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 Gene3D G3DSA:4.10.640.10 5 89 4.8E-31 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1676 4223986882bc964a5ee6e0389256b1af 89 TIGRFAM TIGR00165 S18: ribosomal protein bS18 21 87 1.1E-33 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0813 518346c86508a7d935992c2acb06325b 528 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0813 518346c86508a7d935992c2acb06325b 528 SUPERFAMILY SSF52540 318 514 9.67E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0813 518346c86508a7d935992c2acb06325b 528 SMART SM00382 348 528 1.8E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0813 518346c86508a7d935992c2acb06325b 528 Gene3D G3DSA:3.40.50.300 312 525 3.4E-44 T 12-10-2018 TDE_0813 518346c86508a7d935992c2acb06325b 528 SUPERFAMILY SSF90123 8 308 2.88E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0813 518346c86508a7d935992c2acb06325b 528 Pfam PF00005 ABC transporter 339 483 3.1E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0813 518346c86508a7d935992c2acb06325b 528 Pfam PF00664 ABC transporter transmembrane region 12 279 4.7E-29 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0813 518346c86508a7d935992c2acb06325b 528 Gene3D G3DSA:1.20.1560.10 3 311 4.9E-32 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1000 5f2775fefbf96196c19f4246ad1c8621 292 Gene3D G3DSA:1.10.1040.10 167 292 1.2E-37 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TDE_1000 5f2775fefbf96196c19f4246ad1c8621 292 Gene3D G3DSA:3.40.50.720 2 166 9.7E-48 T 12-10-2018 TDE_1000 5f2775fefbf96196c19f4246ad1c8621 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 289 3.4E-33 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TDE_1000 5f2775fefbf96196c19f4246ad1c8621 292 PIRSF PIRSF000103 1 292 1.6E-64 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 TDE_1000 5f2775fefbf96196c19f4246ad1c8621 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 TDE_1000 5f2775fefbf96196c19f4246ad1c8621 292 SUPERFAMILY SSF51735 6 166 8.59E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_1000 5f2775fefbf96196c19f4246ad1c8621 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 163 8.6E-48 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TDE_1000 5f2775fefbf96196c19f4246ad1c8621 292 SUPERFAMILY SSF48179 168 290 2.38E-36 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TDE_1442 cfe577555f7067022e83b87b3963a5e8 448 Gene3D G3DSA:3.40.50.800 345 446 3.8E-16 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily TDE_1442 cfe577555f7067022e83b87b3963a5e8 448 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 9 435 9.5E-124 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TDE_1442 cfe577555f7067022e83b87b3963a5e8 448 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 5 445 26.757 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TDE_1442 cfe577555f7067022e83b87b3963a5e8 448 Pfam PF13393 Histidyl-tRNA synthetase 12 330 1.7E-52 T 12-10-2018 TDE_1442 cfe577555f7067022e83b87b3963a5e8 448 Gene3D G3DSA:3.30.930.10 2 343 8.3E-106 T 12-10-2018 TDE_1442 cfe577555f7067022e83b87b3963a5e8 448 PIRSF PIRSF001549 3 447 8.6E-129 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 TDE_1442 cfe577555f7067022e83b87b3963a5e8 448 SUPERFAMILY SSF55681 8 335 8.96E-81 T 12-10-2018 TDE_1442 cfe577555f7067022e83b87b3963a5e8 448 SUPERFAMILY SSF52954 347 444 2.16E-6 T 12-10-2018 TDE_2192 3dc03bd54af99c4e4985e7d13727c70f 472 Gene3D G3DSA:3.40.50.1100 86 439 2.2E-72 T 12-10-2018 TDE_2192 3dc03bd54af99c4e4985e7d13727c70f 472 SUPERFAMILY SSF53686 1 471 2.11E-85 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TDE_2192 3dc03bd54af99c4e4985e7d13727c70f 472 Gene3D G3DSA:3.40.50.1100 104 446 2.2E-72 T 12-10-2018 TDE_2192 3dc03bd54af99c4e4985e7d13727c70f 472 Gene3D G3DSA:3.90.1380.10 1 82 2.6E-13 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily TDE_2192 3dc03bd54af99c4e4985e7d13727c70f 472 Pfam PF14821 Threonine synthase N terminus 11 81 1.9E-12 T 12-10-2018 IPR029144 Threonine synthase, N-terminal TDE_0768 ab32c0d828698b2a850523f29c450fdd 211 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 2.4E-59 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 TDE_0768 ab32c0d828698b2a850523f29c450fdd 211 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 3.5E-67 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0768 ab32c0d828698b2a850523f29c450fdd 211 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.589 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0768 ab32c0d828698b2a850523f29c450fdd 211 SUPERFAMILY SSF52166 1 206 7.85E-68 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TDE_0768 ab32c0d828698b2a850523f29c450fdd 211 Gene3D G3DSA:3.40.1370.10 1 209 1.5E-68 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TDE_1447 b422124f45155bb2fa43f33030ae2238 298 Gene3D G3DSA:3.40.50.300 15 203 3.1E-77 T 12-10-2018 TDE_1447 b422124f45155bb2fa43f33030ae2238 298 Pfam PF01715 IPP transferase 47 287 2.6E-58 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TDE_1447 b422124f45155bb2fa43f33030ae2238 298 SUPERFAMILY SSF52540 16 129 2.04E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1447 b422124f45155bb2fa43f33030ae2238 298 Gene3D G3DSA:1.10.20.140 124 192 3.1E-77 T 12-10-2018 TDE_1447 b422124f45155bb2fa43f33030ae2238 298 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 15 295 1.4E-54 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TDE_1447 b422124f45155bb2fa43f33030ae2238 298 Gene3D G3DSA:1.10.287.890 204 286 3.1E-77 T 12-10-2018 TDE_1447 b422124f45155bb2fa43f33030ae2238 298 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 14 298 23.037 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TDE_1447 b422124f45155bb2fa43f33030ae2238 298 SUPERFAMILY SSF52540 15 233 2.35E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0602 be2b64ff84d81865bef66e7e9b7e5bbf 311 Gene3D G3DSA:3.40.47.10 2 311 2.1E-115 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 TDE_0602 be2b64ff84d81865bef66e7e9b7e5bbf 311 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 311 2.4E-100 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TDE_0602 be2b64ff84d81865bef66e7e9b7e5bbf 311 SUPERFAMILY SSF53901 5 311 2.6E-63 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 TDE_0602 be2b64ff84d81865bef66e7e9b7e5bbf 311 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 222 310 2.1E-33 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TDE_0602 be2b64ff84d81865bef66e7e9b7e5bbf 311 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 311 60.873 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TDE_0602 be2b64ff84d81865bef66e7e9b7e5bbf 311 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 187 1.1E-28 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TDE_1498 86673f775fd5aab250dc58c4a3b93c19 501 Gene3D G3DSA:1.25.40.10 400 499 1.7E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1498 86673f775fd5aab250dc58c4a3b93c19 501 Pfam PF13525 Outer membrane lipoprotein 413 495 4.1E-8 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like TDE_1516 b862715fadd0ea1f6942a3f2b757af27 230 SMART SM00382 28 214 4.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1516 b862715fadd0ea1f6942a3f2b757af27 230 SUPERFAMILY SSF52540 3 222 1.33E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1516 b862715fadd0ea1f6942a3f2b757af27 230 Gene3D G3DSA:3.40.50.300 1 216 6.1E-67 T 12-10-2018 TDE_1516 b862715fadd0ea1f6942a3f2b757af27 230 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1516 b862715fadd0ea1f6942a3f2b757af27 230 Pfam PF00005 ABC transporter 19 164 8.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2291 7f1f3e91d3dc8f0254d03e8b3928e6a7 243 Gene3D G3DSA:3.90.550.10 8 243 7.7E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_2291 7f1f3e91d3dc8f0254d03e8b3928e6a7 243 SUPERFAMILY SSF53448 9 242 8.85E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_2291 7f1f3e91d3dc8f0254d03e8b3928e6a7 243 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 126 133 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TDE_2291 7f1f3e91d3dc8f0254d03e8b3928e6a7 243 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 242 4.4E-42 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TDE_0965 f697011c3d31669fb0c12f36551ad667 265 Gene3D G3DSA:3.60.21.10 1 265 7.6E-91 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like TDE_0965 f697011c3d31669fb0c12f36551ad667 265 SUPERFAMILY SSF56300 5 263 1.05E-61 T 12-10-2018 TDE_0965 f697011c3d31669fb0c12f36551ad667 265 Pfam PF13277 YmdB-like protein 10 261 2.8E-88 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TDE_0965 f697011c3d31669fb0c12f36551ad667 265 PIRSF PIRSF004789 4 265 3.2E-97 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TDE_1640 500797213da3477dc096b76048d6c41b 493 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 241 321 2.1E-20 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 TDE_1640 500797213da3477dc096b76048d6c41b 493 Pfam PF01487 Type I 3-dehydroquinase 6 203 1.8E-31 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TDE_1640 500797213da3477dc096b76048d6c41b 493 SUPERFAMILY SSF51735 334 490 5.17E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_1640 500797213da3477dc096b76048d6c41b 493 SUPERFAMILY SSF51569 3 205 2.6E-33 T 12-10-2018 TDE_1640 500797213da3477dc096b76048d6c41b 493 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 350 424 1.8E-7 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase TDE_1640 500797213da3477dc096b76048d6c41b 493 Gene3D G3DSA:3.40.50.720 333 471 4.1E-70 T 12-10-2018 TDE_1640 500797213da3477dc096b76048d6c41b 493 Gene3D G3DSA:3.40.50.10860 239 491 4.1E-70 T 12-10-2018 TDE_1640 500797213da3477dc096b76048d6c41b 493 Gene3D G3DSA:3.20.20.70 1 235 3.3E-36 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_1640 500797213da3477dc096b76048d6c41b 493 SUPERFAMILY SSF53223 230 333 1.38E-25 T 12-10-2018 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 Pfam PF00488 MutS domain V 348 528 1.3E-36 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 Pfam PF01713 Smr domain 745 817 1.2E-14 T 12-10-2018 IPR002625 Smr domain TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 SMART SM00534 345 530 3.1E-72 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 SUPERFAMILY SSF48334 99 290 1.83E-13 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 SUPERFAMILY SSF160443 743 817 1.7E-5 T 12-10-2018 IPR036063 Smr domain superfamily TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 SMART SM00533 9 333 6.2E-4 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 817 18.366 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 PIRSF PIRSF005814 1 818 6.6E-201 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 Gene3D G3DSA:1.10.1420.10 143 259 1.7E-6 T 12-10-2018 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 817 6.1E-173 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 Gene3D G3DSA:1.10.1420.10 260 280 1.7E-6 T 12-10-2018 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 427 443 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 SUPERFAMILY SSF52540 319 531 8.17E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 Gene3D G3DSA:3.30.1370.110 733 818 5.7E-19 T 12-10-2018 TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 SMART SM00463 740 818 9.0E-8 T 12-10-2018 IPR002625 Smr domain TDE_1450 a7412623d4d82640a78b8afc9885a94a 818 Gene3D G3DSA:3.40.50.300 313 615 4.3E-74 T 12-10-2018 TDE_2043 8f03f0aadd7078f7905a916a169809c9 292 SUPERFAMILY SSF47364 4 76 5.1E-9 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 TDE_2043 8f03f0aadd7078f7905a916a169809c9 292 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 21 287 1.9E-86 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TDE_2043 8f03f0aadd7078f7905a916a169809c9 292 SMART SM00382 87 235 1.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2043 8f03f0aadd7078f7905a916a169809c9 292 SMART SM00962 88 290 2.9E-86 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_2043 8f03f0aadd7078f7905a916a169809c9 292 Pfam PF00448 SRP54-type protein, GTPase domain 89 289 4.3E-64 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_2043 8f03f0aadd7078f7905a916a169809c9 292 SUPERFAMILY SSF52540 85 289 1.69E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2043 8f03f0aadd7078f7905a916a169809c9 292 Gene3D G3DSA:3.40.50.300 88 278 6.3E-82 T 12-10-2018 TDE_2043 8f03f0aadd7078f7905a916a169809c9 292 Gene3D G3DSA:1.20.120.140 19 287 6.3E-82 T 12-10-2018 TDE_2043 8f03f0aadd7078f7905a916a169809c9 292 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 263 276 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_1974 21591caed9ec95401d957b239a05049f 391 SUPERFAMILY SSF53756 3 383 9.99E-87 T 12-10-2018 TDE_1974 21591caed9ec95401d957b239a05049f 391 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 379 3.2E-79 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1974 21591caed9ec95401d957b239a05049f 391 Gene3D G3DSA:3.40.50.2000 2 186 1.8E-55 T 12-10-2018 TDE_1974 21591caed9ec95401d957b239a05049f 391 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 150 1.5E-34 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1974 21591caed9ec95401d957b239a05049f 391 Gene3D G3DSA:3.40.50.2000 187 367 9.5E-40 T 12-10-2018 TDE_1974 21591caed9ec95401d957b239a05049f 391 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 199 351 1.6E-30 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 TDE_1974 21591caed9ec95401d957b239a05049f 391 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 384 28.777 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_0893 943a0fa5e3a32bbb77d2cab2fdb26d5c 343 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0893 943a0fa5e3a32bbb77d2cab2fdb26d5c 343 Pfam PF00005 ABC transporter 48 192 2.6E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0893 943a0fa5e3a32bbb77d2cab2fdb26d5c 343 SMART SM00382 57 256 4.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0893 943a0fa5e3a32bbb77d2cab2fdb26d5c 343 Gene3D G3DSA:3.40.50.300 12 313 5.4E-47 T 12-10-2018 TDE_0893 943a0fa5e3a32bbb77d2cab2fdb26d5c 343 SUPERFAMILY SSF52540 34 256 3.29E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1441 94a8a03e75b9e2807ab5699f686ad5b4 362 SUPERFAMILY SSF51735 6 342 7.5E-88 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_1441 94a8a03e75b9e2807ab5699f686ad5b4 362 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 331 1.1E-96 T 12-10-2018 IPR016040 NAD(P)-binding domain TDE_1441 94a8a03e75b9e2807ab5699f686ad5b4 362 Gene3D G3DSA:3.40.50.720 6 331 2.6E-124 T 12-10-2018 TDE_1441 94a8a03e75b9e2807ab5699f686ad5b4 362 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 6 346 2.7E-141 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 TDE_1441 94a8a03e75b9e2807ab5699f686ad5b4 362 Gene3D G3DSA:3.90.25.10 210 339 2.6E-124 T 12-10-2018 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 Gene3D G3DSA:1.25.40.10 226 369 1.2E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 Pfam PF13181 Tetratricopeptide repeat 296 325 0.037 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 Pfam PF13181 Tetratricopeptide repeat 56 88 0.0018 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 Pfam PF13181 Tetratricopeptide repeat 124 156 0.0012 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 Gene3D G3DSA:1.25.40.10 37 108 2.3E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 Gene3D G3DSA:1.25.40.10 156 225 4.9E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 SMART SM00028 55 88 0.018 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 SMART SM00028 89 122 0.0016 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 SMART SM00028 123 156 0.0029 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 SMART SM00028 259 292 0.054 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 SMART SM00028 293 326 9.7E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 SMART SM00028 157 190 6.7E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 SMART SM00028 225 258 0.033 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 SMART SM00028 191 224 0.0046 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 SUPERFAMILY SSF48452 43 338 2.4E-45 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 Gene3D G3DSA:1.25.40.10 109 155 5.9E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 Pfam PF13414 TPR repeat 164 202 5.8E-9 T 12-10-2018 TDE_2023 ecf5849fb9c457d3c1de8667766f8bcd 369 Pfam PF13414 TPR repeat 232 270 1.4E-6 T 12-10-2018 TDE_1863 4979e0a433482b3585c26f491bd9af13 201 SUPERFAMILY SSF47781 66 135 1.33E-19 T 12-10-2018 IPR010994 RuvA domain 2-like TDE_1863 4979e0a433482b3585c26f491bd9af13 201 SUPERFAMILY SSF50249 1 63 3.43E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1863 4979e0a433482b3585c26f491bd9af13 201 Pfam PF01330 RuvA N terminal domain 1 62 5.1E-15 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 TDE_1863 4979e0a433482b3585c26f491bd9af13 201 Gene3D G3DSA:1.10.150.20 67 139 4.9E-24 T 12-10-2018 TDE_1863 4979e0a433482b3585c26f491bd9af13 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 181 7.1E-42 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TDE_1863 4979e0a433482b3585c26f491bd9af13 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 26.536 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TDE_1863 4979e0a433482b3585c26f491bd9af13 201 Pfam PF14520 Helix-hairpin-helix domain 72 129 1.3E-16 T 12-10-2018 TDE_1863 4979e0a433482b3585c26f491bd9af13 201 SMART SM00278 73 92 5.7 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TDE_1863 4979e0a433482b3585c26f491bd9af13 201 SMART SM00278 108 127 0.31 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TDE_1863 4979e0a433482b3585c26f491bd9af13 201 Gene3D G3DSA:2.40.50.140 1 66 4.0E-16 T 12-10-2018 TDE_2686 9b6bf30d83160ff536662a3a525a00da 446 Gene3D G3DSA:3.40.50.300 222 415 1.3E-66 T 12-10-2018 TDE_2686 9b6bf30d83160ff536662a3a525a00da 446 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 321 1.7E-61 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 TDE_2686 9b6bf30d83160ff536662a3a525a00da 446 Gene3D G3DSA:1.20.120.1380 178 417 1.3E-66 T 12-10-2018 TDE_2686 9b6bf30d83160ff536662a3a525a00da 446 SUPERFAMILY SSF52540 224 413 1.23E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2686 9b6bf30d83160ff536662a3a525a00da 446 SMART SM00382 226 346 3.0E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2686 9b6bf30d83160ff536662a3a525a00da 446 SMART SM00962 227 427 3.1E-50 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_2686 9b6bf30d83160ff536662a3a525a00da 446 Pfam PF00448 SRP54-type protein, GTPase domain 228 425 4.7E-37 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_2232 2844d9239607ce20b45f568771bcefa3 259 SUPERFAMILY SSF52540 4 234 9.52E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2232 2844d9239607ce20b45f568771bcefa3 259 Gene3D G3DSA:3.40.50.300 1 254 1.4E-67 T 12-10-2018 TDE_2232 2844d9239607ce20b45f568771bcefa3 259 SMART SM00382 30 219 6.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2232 2844d9239607ce20b45f568771bcefa3 259 Pfam PF00005 ABC transporter 21 171 1.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1881 e8dc1d0b96a7d7612bfa3de3dc7e2eec 183 Gene3D G3DSA:3.40.50.150 1 182 6.5E-46 T 12-10-2018 TDE_1881 e8dc1d0b96a7d7612bfa3de3dc7e2eec 183 Pfam PF03602 Conserved hypothetical protein 95 1 174 8.8E-43 T 12-10-2018 TDE_1881 e8dc1d0b96a7d7612bfa3de3dc7e2eec 183 PIRSF PIRSF004553 1 176 2.5E-57 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 TDE_1881 e8dc1d0b96a7d7612bfa3de3dc7e2eec 183 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 110 116 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TDE_1881 e8dc1d0b96a7d7612bfa3de3dc7e2eec 183 SUPERFAMILY SSF53335 1 174 2.52E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1881 e8dc1d0b96a7d7612bfa3de3dc7e2eec 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 175 1.2E-38 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 TDE_2727 b5d1362b1ab01a4c33950bb1a762b0cb 364 SUPERFAMILY SSF52540 100 317 1.8E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2727 b5d1362b1ab01a4c33950bb1a762b0cb 364 Gene3D G3DSA:1.10.40.50 258 329 1.6E-17 T 12-10-2018 TDE_2727 b5d1362b1ab01a4c33950bb1a762b0cb 364 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 21 320 26.652 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TDE_2727 b5d1362b1ab01a4c33950bb1a762b0cb 364 Gene3D G3DSA:3.40.50.300 87 257 1.8E-36 T 12-10-2018 TDE_2727 b5d1362b1ab01a4c33950bb1a762b0cb 364 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 63 313 7.2E-47 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TDE_2727 b5d1362b1ab01a4c33950bb1a762b0cb 364 Pfam PF03193 RsgA GTPase 84 257 1.1E-40 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 TDE_1468 4654a32993469938a80f9d9cdd734bd2 218 Pfam PF00814 Glycoprotease family 31 147 2.6E-15 T 12-10-2018 IPR000905 Gcp-like domain TDE_1468 4654a32993469938a80f9d9cdd734bd2 218 Gene3D G3DSA:3.30.420.40 95 177 1.1E-28 T 12-10-2018 TDE_1468 4654a32993469938a80f9d9cdd734bd2 218 Gene3D G3DSA:3.30.420.40 3 213 1.1E-28 T 12-10-2018 TDE_1468 4654a32993469938a80f9d9cdd734bd2 218 SUPERFAMILY SSF53067 1 99 1.62E-17 T 12-10-2018 TDE_1468 4654a32993469938a80f9d9cdd734bd2 218 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 212 1.0E-35 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 TDE_2622 12c5425fc6cd7d5b828abc7887bf1ddd 470 SUPERFAMILY SSF52540 2 231 5.32E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2622 12c5425fc6cd7d5b828abc7887bf1ddd 470 Pfam PF00005 ABC transporter 291 426 3.0E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2622 12c5425fc6cd7d5b828abc7887bf1ddd 470 Pfam PF00005 ABC transporter 24 175 1.1E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2622 12c5425fc6cd7d5b828abc7887bf1ddd 470 SUPERFAMILY SSF52540 263 468 9.87E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2622 12c5425fc6cd7d5b828abc7887bf1ddd 470 Gene3D G3DSA:3.40.50.300 1 263 2.9E-55 T 12-10-2018 TDE_2622 12c5425fc6cd7d5b828abc7887bf1ddd 470 Gene3D G3DSA:3.40.50.300 265 470 9.4E-52 T 12-10-2018 TDE_2622 12c5425fc6cd7d5b828abc7887bf1ddd 470 SMART SM00382 33 231 5.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2622 12c5425fc6cd7d5b828abc7887bf1ddd 470 SMART SM00382 295 469 1.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2622 12c5425fc6cd7d5b828abc7887bf1ddd 470 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1461 0e18c0539d607612242e241af466f314 149 Pfam PF04977 Septum formation initiator 16 92 2.1E-15 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC TDE_1747 e47999641adce2f17475ba2233b7b463 407 Pfam PF01966 HD domain 234 350 2.4E-11 T 12-10-2018 IPR006674 HD domain TDE_1747 e47999641adce2f17475ba2233b7b463 407 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 227 394 5.0E-33 T 12-10-2018 IPR005249 Conserved hypothetical protein CHP00488 TDE_1747 e47999641adce2f17475ba2233b7b463 407 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 196 5.6E-47 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TDE_1747 e47999641adce2f17475ba2233b7b463 407 SMART SM00471 230 361 2.1E-8 T 12-10-2018 IPR003607 HD/PDEase domain TDE_1747 e47999641adce2f17475ba2233b7b463 407 Pfam PF01467 Cytidylyltransferase-like 5 170 1.1E-20 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TDE_1747 e47999641adce2f17475ba2233b7b463 407 SUPERFAMILY SSF52374 3 199 1.47E-42 T 12-10-2018 TDE_1747 e47999641adce2f17475ba2233b7b463 407 Gene3D G3DSA:1.10.3210.10 216 405 8.6E-49 T 12-10-2018 TDE_1747 e47999641adce2f17475ba2233b7b463 407 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 67 1.6E-7 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TDE_1747 e47999641adce2f17475ba2233b7b463 407 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 197 26.911 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TDE_1747 e47999641adce2f17475ba2233b7b463 407 Gene3D G3DSA:3.40.50.620 1 204 3.1E-52 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1747 e47999641adce2f17475ba2233b7b463 407 SUPERFAMILY SSF109604 214 396 4.97E-25 T 12-10-2018 TDE_1055 f281157b298b71fabcbfb10e8e36d36a 449 Pfam PF01554 MatE 23 183 9.4E-30 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_1055 f281157b298b71fabcbfb10e8e36d36a 449 Pfam PF01554 MatE 245 404 7.9E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_1055 f281157b298b71fabcbfb10e8e36d36a 449 PIRSF PIRSF006603 1 449 6.7E-98 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_1055 f281157b298b71fabcbfb10e8e36d36a 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 410 1.3E-55 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_1992 044068ea7bc231f5c81c33cb36fb0913 452 Pfam PF00691 OmpA family 350 444 5.5E-19 T 12-10-2018 IPR006665 OmpA-like domain TDE_1992 044068ea7bc231f5c81c33cb36fb0913 452 Gene3D G3DSA:3.30.1330.60 315 451 2.6E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_1992 044068ea7bc231f5c81c33cb36fb0913 452 SUPERFAMILY SSF103088 338 450 1.19E-27 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 Gene3D G3DSA:3.90.70.10 504 632 1.6E-10 T 12-10-2018 TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 Gene3D G3DSA:2.60.40.1080 36 121 1.8E-15 T 12-10-2018 TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 Gene3D G3DSA:2.60.40.1080 124 212 2.0E-8 T 12-10-2018 TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 SMART SM00635 126 206 0.35 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 SMART SM00635 39 118 1.0E-6 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 SUPERFAMILY SSF54001 328 642 1.67E-70 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 SUPERFAMILY SSF49373 39 121 7.46E-13 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 SUPERFAMILY SSF49373 123 208 9.81E-6 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 Pfam PF02368 Bacterial Ig-like domain (group 2) 39 116 1.3E-11 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 TDE_0362 b7559a74ba92e910a6d3155fc3a7c9b0 647 Pfam PF09028 Mac 1 404 639 5.1E-20 T 12-10-2018 IPR015117 Ig protease IdeS GO:0008233 TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 SMART SM00116 49 98 0.066 T 12-10-2018 IPR000644 CBS domain TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 SMART SM00116 111 159 41.0 T 12-10-2018 IPR000644 CBS domain TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 SUPERFAMILY SSF54631 35 175 4.04E-32 T 12-10-2018 TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 Gene3D G3DSA:3.10.580.10 20 168 4.7E-55 T 12-10-2018 TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 Pfam PF00571 CBS domain 113 159 2.0E-4 T 12-10-2018 IPR000644 CBS domain TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 Pfam PF00571 CBS domain 40 97 1.3E-5 T 12-10-2018 IPR000644 CBS domain TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 SMART SM01091 174 253 1.2E-22 T 12-10-2018 IPR005170 Transporter-associated domain TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 SUPERFAMILY SSF56176 171 254 4.91E-20 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 Pfam PF03471 Transporter associated domain 175 251 1.2E-20 T 12-10-2018 IPR005170 Transporter-associated domain TDE_1243 b0cae04cb9bbb519c2cae2aa0dc10d58 258 Gene3D G3DSA:3.30.465.10 169 258 2.2E-20 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TDE_1669 1c8121414ee90baa5ac99df77c63c8de 397 Gene3D G3DSA:3.40.640.10 70 294 7.0E-147 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_1669 1c8121414ee90baa5ac99df77c63c8de 397 Pfam PF00155 Aminotransferase class I and II 32 374 9.8E-25 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TDE_1669 1c8121414ee90baa5ac99df77c63c8de 397 SUPERFAMILY SSF53383 1 392 2.06E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_1669 1c8121414ee90baa5ac99df77c63c8de 397 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 391 2.1E-121 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 TDE_1669 1c8121414ee90baa5ac99df77c63c8de 397 Gene3D G3DSA:3.90.1150.10 13 386 7.0E-147 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_1736 b6458fbc3bf6df34ead1f716cde7c041 56 SUPERFAMILY SSF54862 1 55 3.97E-18 T 12-10-2018 TDE_1736 b6458fbc3bf6df34ead1f716cde7c041 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_1736 b6458fbc3bf6df34ead1f716cde7c041 56 Gene3D G3DSA:3.30.70.20 2 55 1.9E-19 T 12-10-2018 TDE_1736 b6458fbc3bf6df34ead1f716cde7c041 56 Pfam PF00037 4Fe-4S binding domain 32 54 1.8E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_1736 b6458fbc3bf6df34ead1f716cde7c041 56 Pfam PF00037 4Fe-4S binding domain 4 25 1.2E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_2074 47253dc14e6302e1511a16b2ed430d7c 347 SUPERFAMILY SSF102114 102 302 2.09E-15 T 12-10-2018 TDE_2074 47253dc14e6302e1511a16b2ed430d7c 347 Gene3D G3DSA:3.20.20.70 67 328 1.0E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2074 47253dc14e6302e1511a16b2ed430d7c 347 PIRSF PIRSF006004 3 346 7.7E-116 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 TDE_2074 47253dc14e6302e1511a16b2ed430d7c 347 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 7 343 61.895 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TDE_2074 47253dc14e6302e1511a16b2ed430d7c 347 Pfam PF13394 4Fe-4S single cluster domain 112 213 6.5E-6 T 12-10-2018 TDE_2074 47253dc14e6302e1511a16b2ed430d7c 347 Pfam PF04055 Radical SAM superfamily 109 267 1.4E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_2074 47253dc14e6302e1511a16b2ed430d7c 347 SMART SM00729 104 318 0.005 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_2074 47253dc14e6302e1511a16b2ed430d7c 347 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 17 339 2.2E-101 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TDE_2074 47253dc14e6302e1511a16b2ed430d7c 347 Gene3D G3DSA:1.10.150.530 7 64 2.5E-11 T 12-10-2018 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 SUPERFAMILY SSF55681 96 468 2.87E-98 T 12-10-2018 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 Gene3D G3DSA:3.30.930.10 107 471 1.7E-115 T 12-10-2018 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 Gene3D G3DSA:2.40.50.140 2 106 1.9E-16 T 12-10-2018 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 PRINTS PR01042 Aspartyl-tRNA synthetase signature 215 227 4.6E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 PRINTS PR01042 Aspartyl-tRNA synthetase signature 231 244 4.6E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 PRINTS PR01042 Aspartyl-tRNA synthetase signature 388 404 4.6E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 PRINTS PR01042 Aspartyl-tRNA synthetase signature 428 442 4.6E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 5 473 46.323 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 466 3.8E-85 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.4E-9 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 SUPERFAMILY SSF50249 7 103 2.79E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_0980 e44b74ac38a8e968487ae1b3f2e10ef1 473 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 473 4.7E-190 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 TDE_1341 33fff9d2a6fc81a60ceb1085d1856933 460 Gene3D G3DSA:3.40.50.620 24 222 1.1E-58 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1341 33fff9d2a6fc81a60ceb1085d1856933 460 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 323 22.512 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TDE_1341 33fff9d2a6fc81a60ceb1085d1856933 460 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 391 434 2.1E-12 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TDE_1341 33fff9d2a6fc81a60ceb1085d1856933 460 SUPERFAMILY SSF56037 370 446 1.46E-6 T 12-10-2018 TDE_1341 33fff9d2a6fc81a60ceb1085d1856933 460 SUPERFAMILY SSF52402 31 241 3.49E-44 T 12-10-2018 TDE_1341 33fff9d2a6fc81a60ceb1085d1856933 460 Pfam PF01171 PP-loop family 32 215 2.5E-51 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TDE_1341 33fff9d2a6fc81a60ceb1085d1856933 460 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 31 218 5.8E-57 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TDE_1728 a53c24a163b8355c4ec443141af9945e 672 Gene3D G3DSA:2.40.10.120 56 241 8.4E-17 T 12-10-2018 TDE_1728 a53c24a163b8355c4ec443141af9945e 672 SUPERFAMILY SSF50494 68 237 9.69E-19 T 12-10-2018 IPR009003 Peptidase S1, PA clan TDE_1684 b1c44d61533998c5906e8ad472de38e4 190 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 19 185 6.3E-60 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 TDE_1684 b1c44d61533998c5906e8ad472de38e4 190 Pfam PF00156 Phosphoribosyl transferase domain 53 163 1.4E-18 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TDE_1684 b1c44d61533998c5906e8ad472de38e4 190 Gene3D G3DSA:3.40.50.2020 13 188 7.9E-60 T 12-10-2018 TDE_1684 b1c44d61533998c5906e8ad472de38e4 190 SUPERFAMILY SSF53271 22 187 6.69E-51 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like TDE_1684 b1c44d61533998c5906e8ad472de38e4 190 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 18 185 35.939 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 TDE_1048 377f0ed6872cd3eb8b64cfc2ea4db268 156 SUPERFAMILY SSF47973 7 149 1.44E-60 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TDE_1048 377f0ed6872cd3eb8b64cfc2ea4db268 156 PIRSF PIRSF002122 5 156 7.3E-61 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 TDE_1048 377f0ed6872cd3eb8b64cfc2ea4db268 156 Gene3D G3DSA:1.10.455.10 3 156 2.2E-62 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TDE_1048 377f0ed6872cd3eb8b64cfc2ea4db268 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 4 156 2.1E-68 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TDE_1048 377f0ed6872cd3eb8b64cfc2ea4db268 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_1048 377f0ed6872cd3eb8b64cfc2ea4db268 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.1E-63 T 12-10-2018 IPR023798 Ribosomal protein S7 domain TDE_1048 377f0ed6872cd3eb8b64cfc2ea4db268 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.81 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 Gene3D G3DSA:3.90.600.10 338 434 1.5E-26 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 106 4.8E-28 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 Gene3D G3DSA:3.40.50.20 2 99 2.5E-26 T 12-10-2018 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 430 38.136 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 SUPERFAMILY SSF56059 108 332 2.65E-54 T 12-10-2018 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 430 1.2E-143 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 SMART SM01210 337 430 8.1E-35 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 338 428 1.9E-22 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 SUPERFAMILY SSF52440 1 106 1.4E-27 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 297 304 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 Gene3D G3DSA:3.30.470.20 195 337 2.7E-53 T 12-10-2018 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 SUPERFAMILY SSF51246 336 429 6.04E-24 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 SMART SM01209 107 303 1.3E-117 T 12-10-2018 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 Gene3D G3DSA:3.30.1490.20 125 194 1.3E-25 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TDE_1267 4f2fafb912d02e4fdf10c3d66258bcb5 437 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 107 303 9.9E-77 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_2665 078855469a2e4c75db74e921437fc35d 504 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 309 321 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 TDE_2665 078855469a2e4c75db74e921437fc35d 504 Gene3D G3DSA:3.20.20.70 5 502 1.3E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2665 078855469a2e4c75db74e921437fc35d 504 PIRSF PIRSF000130 2 504 3.4E-139 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TDE_2665 078855469a2e4c75db74e921437fc35d 504 SUPERFAMILY SSF54631 110 214 3.79E-17 T 12-10-2018 TDE_2665 078855469a2e4c75db74e921437fc35d 504 SUPERFAMILY SSF51412 6 493 1.14E-101 T 12-10-2018 TDE_2665 078855469a2e4c75db74e921437fc35d 504 SMART SM01240 8 489 4.2E-181 T 12-10-2018 TDE_2665 078855469a2e4c75db74e921437fc35d 504 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 489 2.3E-114 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 TDE_1751 782b80af8215efbc1ff0d26af9fb084f 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.9E-35 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1751 782b80af8215efbc1ff0d26af9fb084f 103 SUPERFAMILY SSF141091 1 101 2.88E-34 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1751 782b80af8215efbc1ff0d26af9fb084f 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 4.7E-33 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1751 782b80af8215efbc1ff0d26af9fb084f 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1751 782b80af8215efbc1ff0d26af9fb084f 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 23.914 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1818 02967ddad6a369045322596b07f604e6 319 Pfam PF08239 Bacterial SH3 domain 45 113 3.4E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type TDE_1818 02967ddad6a369045322596b07f604e6 319 Gene3D G3DSA:2.30.30.40 39 117 1.4E-9 T 12-10-2018 TDE_2706 d8b96d55c2401a2aa1547594e1dd2169 625 SUPERFAMILY SSF103473 3 391 1.96E-34 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_2706 d8b96d55c2401a2aa1547594e1dd2169 625 Gene3D G3DSA:1.20.1250.20 3 398 2.1E-24 T 12-10-2018 TDE_2706 d8b96d55c2401a2aa1547594e1dd2169 625 Pfam PF13347 MFS/sugar transport protein 13 393 1.8E-65 T 12-10-2018 TDE_0035 f64781011db98e6c5f4ed659e2773eb3 146 SUPERFAMILY SSF55729 2 130 2.7E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_0035 f64781011db98e6c5f4ed659e2773eb3 146 Pfam PF00583 Acetyltransferase (GNAT) family 36 125 2.2E-17 T 12-10-2018 IPR000182 GNAT domain TDE_0035 f64781011db98e6c5f4ed659e2773eb3 146 PIRSF PIRSF037663 1 139 3.0E-14 T 12-10-2018 IPR017255 Acetyltransferase, GNAT, predicted TDE_0035 f64781011db98e6c5f4ed659e2773eb3 146 Gene3D G3DSA:3.40.630.30 1 136 2.4E-36 T 12-10-2018 TDE_0041 848134b4574f0abc77ea62e997ed7301 352 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 92 348 3.2E-41 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TDE_0041 848134b4574f0abc77ea62e997ed7301 352 Pfam PF03099 Biotin/lipoate A/B protein ligase family 96 232 5.0E-14 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TDE_0041 848134b4574f0abc77ea62e997ed7301 352 SUPERFAMILY SSF50037 305 348 3.94E-5 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal TDE_0041 848134b4574f0abc77ea62e997ed7301 352 Pfam PF02237 Biotin protein ligase C terminal domain 303 348 3.1E-6 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TDE_0041 848134b4574f0abc77ea62e997ed7301 352 Gene3D G3DSA:3.30.930.10 77 299 6.0E-49 T 12-10-2018 TDE_0041 848134b4574f0abc77ea62e997ed7301 352 Pfam PF08279 HTH domain 14 64 2.9E-10 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 TDE_0041 848134b4574f0abc77ea62e997ed7301 352 Gene3D G3DSA:2.30.30.100 303 349 1.0E-10 T 12-10-2018 TDE_0041 848134b4574f0abc77ea62e997ed7301 352 SUPERFAMILY SSF55681 89 283 7.81E-44 T 12-10-2018 TDE_0041 848134b4574f0abc77ea62e997ed7301 352 Gene3D G3DSA:1.10.10.10 5 68 1.5E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0041 848134b4574f0abc77ea62e997ed7301 352 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 12 349 29.444 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 TDE_0041 848134b4574f0abc77ea62e997ed7301 352 SUPERFAMILY SSF46785 17 65 1.11E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_1268 66a0f7c1d8e7aad500a2716e538b33af 256 Pfam PF06044 Dam-replacing family 1 255 9.6E-120 T 12-10-2018 IPR010324 Dam-replacing TDE_1268 66a0f7c1d8e7aad500a2716e538b33af 256 Gene3D G3DSA:1.10.10.10 167 256 2.2E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1268 66a0f7c1d8e7aad500a2716e538b33af 256 Gene3D G3DSA:3.40.210.30 1 166 1.9E-66 T 12-10-2018 TDE_1332 66ecee75ccec13de32e9f725d600009e 318 TIGRFAM TIGR01933 hflK: HflK protein 32 313 8.6E-102 T 12-10-2018 IPR010201 HflK GO:0016021 TDE_1332 66ecee75ccec13de32e9f725d600009e 318 Pfam PF01145 SPFH domain / Band 7 family 34 224 1.9E-27 T 12-10-2018 IPR001107 Band 7 domain TDE_1332 66ecee75ccec13de32e9f725d600009e 318 Gene3D G3DSA:3.30.479.30 92 213 2.8E-15 T 12-10-2018 TDE_1332 66ecee75ccec13de32e9f725d600009e 318 SUPERFAMILY SSF117892 61 213 1.96E-17 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily TDE_1332 66ecee75ccec13de32e9f725d600009e 318 SMART SM00244 30 211 1.1E-36 T 12-10-2018 IPR001107 Band 7 domain TDE_2165 db169ae345910397a6772549e3226dab 220 SUPERFAMILY SSF52540 5 216 2.76E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2165 db169ae345910397a6772549e3226dab 220 PIRSF PIRSF005624 2 220 3.3E-84 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 TDE_2165 db169ae345910397a6772549e3226dab 220 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 36 196 9.8E-28 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TDE_2165 db169ae345910397a6772549e3226dab 220 Gene3D G3DSA:3.40.50.300 15 219 2.5E-60 T 12-10-2018 TDE_2165 db169ae345910397a6772549e3226dab 220 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 8 217 8.8E-75 T 12-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 TDE_0542 7df68d34db0c0b387858894968bea76b 160 Pfam PF00583 Acetyltransferase (GNAT) family 30 143 1.0E-10 T 12-10-2018 IPR000182 GNAT domain TDE_0542 7df68d34db0c0b387858894968bea76b 160 SUPERFAMILY SSF55729 2 149 2.34E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_0542 7df68d34db0c0b387858894968bea76b 160 Gene3D G3DSA:3.40.630.30 48 157 2.3E-20 T 12-10-2018 TDE_0155 1ed86b5efef4531018ea324e884c7d70 623 SUPERFAMILY SSF55073 436 620 1.57E-32 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0155 1ed86b5efef4531018ea324e884c7d70 623 Gene3D G3DSA:3.30.70.1230 436 623 3.7E-30 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0155 1ed86b5efef4531018ea324e884c7d70 623 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 442 616 1.8E-15 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0155 1ed86b5efef4531018ea324e884c7d70 623 Pfam PF07695 7TM diverse intracellular signalling 194 389 5.5E-21 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 TDE_2348 06cb722eebc4d3918bd7fd4f7cbcee55 203 SUPERFAMILY SSF52972 2 197 9.16E-53 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TDE_2348 06cb722eebc4d3918bd7fd4f7cbcee55 203 PIRSF PIRSF006305 1 203 2.2E-64 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 TDE_2348 06cb722eebc4d3918bd7fd4f7cbcee55 203 Hamap MF_00528 Septum formation protein Maf [maf]. 3 202 27.268 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 TDE_2348 06cb722eebc4d3918bd7fd4f7cbcee55 203 Gene3D G3DSA:3.90.950.10 2 202 1.1E-58 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TDE_2348 06cb722eebc4d3918bd7fd4f7cbcee55 203 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 195 1.7E-49 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 TDE_2348 06cb722eebc4d3918bd7fd4f7cbcee55 203 Pfam PF02545 Maf-like protein 4 197 8.2E-51 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 Gene3D G3DSA:1.10.220.30 15 117 1.3E-18 T 12-10-2018 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 21 37 6.3E-85 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 6.3E-85 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 288 314 6.3E-85 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 50 76 6.3E-85 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 211 236 6.3E-85 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 242 262 6.3E-85 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 264 284 6.3E-85 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 Pfam PF01706 FliG C-terminal domain 233 340 2.4E-43 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal TDE_1216 03e5581319008527632e75f6e9e99f4e 349 Gene3D G3DSA:1.10.220.30 119 210 7.3E-35 T 12-10-2018 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 Gene3D G3DSA:1.10.220.30 211 349 2.7E-50 T 12-10-2018 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 PIRSF PIRSF003161 15 349 3.1E-119 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 16 347 2.3E-140 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TDE_1216 03e5581319008527632e75f6e9e99f4e 349 SUPERFAMILY SSF48029 21 130 3.14E-21 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TDE_1216 03e5581319008527632e75f6e9e99f4e 349 SUPERFAMILY SSF48029 130 341 4.45E-70 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TDE_1216 03e5581319008527632e75f6e9e99f4e 349 Pfam PF14842 FliG N-terminal domain 21 123 8.8E-34 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain TDE_1216 03e5581319008527632e75f6e9e99f4e 349 Pfam PF14841 FliG middle domain 131 205 1.4E-31 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain TDE_0352 e41943e160418b82ad6c432adbd684bb 150 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 1.2E-43 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TDE_0352 e41943e160418b82ad6c432adbd684bb 150 Gene3D G3DSA:3.40.1400.10 1 148 4.2E-48 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TDE_0352 e41943e160418b82ad6c432adbd684bb 150 Pfam PF02502 Ribose/Galactose Isomerase 3 140 9.3E-44 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TDE_0352 e41943e160418b82ad6c432adbd684bb 150 PIRSF PIRSF005384 1 148 2.9E-53 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TDE_0352 e41943e160418b82ad6c432adbd684bb 150 SUPERFAMILY SSF89623 1 145 2.22E-47 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 Gene3D G3DSA:3.90.45.10 1 167 1.2E-60 T 12-10-2018 IPR036821 Peptide deformylase superfamily TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 SUPERFAMILY SSF56420 2 154 1.28E-55 T 12-10-2018 IPR036821 Peptide deformylase superfamily TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 PIRSF PIRSF004749 1 166 1.3E-52 T 12-10-2018 IPR023635 Peptide deformylase TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 Hamap MF_00163 Peptide deformylase [def]. 2 157 28.317 T 12-10-2018 IPR023635 Peptide deformylase TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 PRINTS PR01576 Peptide deformylase signature 30 59 1.4E-34 T 12-10-2018 IPR023635 Peptide deformylase TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 PRINTS PR01576 Peptide deformylase signature 96 114 1.4E-34 T 12-10-2018 IPR023635 Peptide deformylase TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 PRINTS PR01576 Peptide deformylase signature 115 144 1.4E-34 T 12-10-2018 IPR023635 Peptide deformylase TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 PRINTS PR01576 Peptide deformylase signature 84 95 1.4E-34 T 12-10-2018 IPR023635 Peptide deformylase TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 Pfam PF01327 Polypeptide deformylase 2 147 5.5E-51 T 12-10-2018 IPR023635 Peptide deformylase TDE_1645 0cffab11a31f8432adb66e9366b8da24 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 2 152 5.7E-54 T 12-10-2018 IPR023635 Peptide deformylase TDE_1584 98bead4f261f2a5b5a9e5037e8eba668 249 Pfam PF04402 Protein of unknown function (DUF541) 35 246 9.2E-40 T 12-10-2018 IPR007497 Protein of unknown function DUF541 TDE_1584 98bead4f261f2a5b5a9e5037e8eba668 249 Gene3D G3DSA:3.30.70.2970 47 154 5.8E-39 T 12-10-2018 TDE_1584 98bead4f261f2a5b5a9e5037e8eba668 249 Gene3D G3DSA:3.30.110.170 37 247 5.8E-39 T 12-10-2018 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 Gene3D G3DSA:3.40.50.1820 11 677 4.0E-243 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 SUPERFAMILY SSF50993 4 407 1.96E-88 T 12-10-2018 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 513 543 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 Gene3D G3DSA:2.130.10.120 67 412 4.0E-243 T 12-10-2018 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 SUPERFAMILY SSF53474 420 678 2.95E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 452 470 2.8E-56 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 506 525 2.8E-56 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 478 502 2.8E-56 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 611 633 2.8E-56 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 536 556 2.8E-56 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 592 607 2.8E-56 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 4 406 8.8E-110 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 TDE_1195 b40c4c856511e97ac75922f2f3fbe0f3 685 Pfam PF00326 Prolyl oligopeptidase family 468 682 2.0E-67 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TDE_1177 cd15347f241b3459fd1a87f6f23fc438 167 SUPERFAMILY SSF52218 1 165 3.61E-21 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_1177 cd15347f241b3459fd1a87f6f23fc438 167 Pfam PF12641 Flavodoxin domain 5 162 8.3E-59 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 TDE_1177 cd15347f241b3459fd1a87f6f23fc438 167 Gene3D G3DSA:3.40.50.360 2 167 1.4E-13 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0284 79ea9c99dab1ca7a785fbc7654dfde91 200 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 9 196 1.0E-61 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_0284 79ea9c99dab1ca7a785fbc7654dfde91 200 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 11 196 3.1E-57 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_2514 fe57b1088f31511775c71e037ab9ee93 225 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 205 4.8E-20 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 TDE_2514 fe57b1088f31511775c71e037ab9ee93 225 SUPERFAMILY SSF56300 1 212 1.09E-57 T 12-10-2018 TDE_2514 fe57b1088f31511775c71e037ab9ee93 225 Gene3D G3DSA:3.60.21.10 1 218 8.1E-38 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like TDE_0907 37af32bafc1bc33f1c4cd834e065340e 198 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 12 195 3.0E-37 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_0907 37af32bafc1bc33f1c4cd834e065340e 198 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 8 196 4.7E-57 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_1315 d9b63620e9eb76af342a604ccb4cc8e4 578 Pfam PF01973 Protein of unknown function DUF115 229 398 3.6E-40 T 12-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TDE_0075 0863a31ff4dd8fce1df549a69d9c83e1 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 140 7.3E-24 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TDE_0075 0863a31ff4dd8fce1df549a69d9c83e1 348 SUPERFAMILY SSF51735 145 317 2.96E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0075 0863a31ff4dd8fce1df549a69d9c83e1 348 Gene3D G3DSA:3.90.180.10 12 335 6.1E-86 T 12-10-2018 TDE_0075 0863a31ff4dd8fce1df549a69d9c83e1 348 Pfam PF00107 Zinc-binding dehydrogenase 183 309 4.1E-21 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TDE_0075 0863a31ff4dd8fce1df549a69d9c83e1 348 SMART SM00829 12 346 0.0017 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TDE_0075 0863a31ff4dd8fce1df549a69d9c83e1 348 SUPERFAMILY SSF50129 5 180 1.1E-43 T 12-10-2018 IPR011032 GroES-like superfamily TDE_0075 0863a31ff4dd8fce1df549a69d9c83e1 348 Gene3D G3DSA:3.40.50.720 158 295 6.1E-86 T 12-10-2018 TDE_0075 0863a31ff4dd8fce1df549a69d9c83e1 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TDE_0502 4f2d1436a553843ada4c8fbab3a59556 354 SMART SM00248 104 133 0.0013 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0502 4f2d1436a553843ada4c8fbab3a59556 354 SMART SM00248 137 174 160.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0502 4f2d1436a553843ada4c8fbab3a59556 354 SMART SM00248 37 68 1600.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0502 4f2d1436a553843ada4c8fbab3a59556 354 SMART SM00248 72 100 1200.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0502 4f2d1436a553843ada4c8fbab3a59556 354 Pfam PF12796 Ankyrin repeats (3 copies) 50 135 3.4E-12 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_0502 4f2d1436a553843ada4c8fbab3a59556 354 SUPERFAMILY SSF48403 31 171 2.64E-25 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_0502 4f2d1436a553843ada4c8fbab3a59556 354 Gene3D G3DSA:1.25.40.20 3 181 2.9E-27 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2450 f4cc3ec92b771ed8ad07d3c8b034b3c7 300 SUPERFAMILY SSF48403 148 295 9.64E-36 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2450 f4cc3ec92b771ed8ad07d3c8b034b3c7 300 SMART SM00248 142 171 3900.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2450 f4cc3ec92b771ed8ad07d3c8b034b3c7 300 SMART SM00248 175 204 1.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2450 f4cc3ec92b771ed8ad07d3c8b034b3c7 300 SMART SM00248 209 238 0.032 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2450 f4cc3ec92b771ed8ad07d3c8b034b3c7 300 SMART SM00248 242 271 0.046 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2450 f4cc3ec92b771ed8ad07d3c8b034b3c7 300 Pfam PF12796 Ankyrin repeats (3 copies) 150 239 9.2E-13 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_2450 f4cc3ec92b771ed8ad07d3c8b034b3c7 300 Gene3D G3DSA:1.25.40.20 125 300 4.9E-37 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2450 f4cc3ec92b771ed8ad07d3c8b034b3c7 300 Pfam PF00023 Ankyrin repeat 242 273 0.0035 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_0575 696ae0da26379db893076a5af57c7b57 493 Pfam PF02934 GatB/GatE catalytic domain 12 304 2.6E-103 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 TDE_0575 696ae0da26379db893076a5af57c7b57 493 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 153 167 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 TDE_0575 696ae0da26379db893076a5af57c7b57 493 Gene3D G3DSA:1.10.10.410 431 493 8.7E-23 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal TDE_0575 696ae0da26379db893076a5af57c7b57 493 SUPERFAMILY SSF89095 313 419 6.02E-32 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 TDE_0575 696ae0da26379db893076a5af57c7b57 493 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 8 491 1.8E-170 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TDE_0575 696ae0da26379db893076a5af57c7b57 493 Gene3D G3DSA:1.10.150.380 313 430 1.7E-37 T 12-10-2018 TDE_0575 696ae0da26379db893076a5af57c7b57 493 SMART SM00845 344 491 5.9E-69 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TDE_0575 696ae0da26379db893076a5af57c7b57 493 Pfam PF02637 GatB domain 345 491 1.4E-52 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TDE_0575 696ae0da26379db893076a5af57c7b57 493 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 8 492 35.404 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TDE_0575 696ae0da26379db893076a5af57c7b57 493 SUPERFAMILY SSF55931 10 310 4.12E-101 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TDE_0330 9a8873a74c9d4b1d78dd66f78ded15df 224 Pfam PF09711 CRISPR-associated protein (Cas_Csn2) 40 220 1.0E-57 T 12-10-2018 IPR010146 CRISPR-associated protein, Csn2-type TDE_0330 9a8873a74c9d4b1d78dd66f78ded15df 224 Gene3D G3DSA:3.40.50.11940 121 224 8.5E-10 T 12-10-2018 IPR038600 CRISPR-associated protein Csn2 superfamily TDE_0330 9a8873a74c9d4b1d78dd66f78ded15df 224 TIGRFAM TIGR01866 cas_Csn2: CRISPR type II-A/NMEMI-associated protein Csn2 2 223 1.2E-71 T 12-10-2018 IPR010146 CRISPR-associated protein, Csn2-type TDE_0786 13536ed0db88092ca17601d863bdb61e 150 SUPERFAMILY SSF52080 5 146 7.72E-42 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily TDE_0786 13536ed0db88092ca17601d863bdb61e 150 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 146 7.4E-38 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P TDE_0786 13536ed0db88092ca17601d863bdb61e 150 Gene3D G3DSA:3.100.10.10 70 148 1.9E-22 T 12-10-2018 TDE_0786 13536ed0db88092ca17601d863bdb61e 150 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 6 145 4.4E-51 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0786 13536ed0db88092ca17601d863bdb61e 150 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0786 13536ed0db88092ca17601d863bdb61e 150 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 4 148 20.02 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 TDE_0685 95aecc216f1cd855f2bbccb7ee6cf25b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0685 95aecc216f1cd855f2bbccb7ee6cf25b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 2.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0685 95aecc216f1cd855f2bbccb7ee6cf25b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 2.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0685 95aecc216f1cd855f2bbccb7ee6cf25b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 2.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0685 95aecc216f1cd855f2bbccb7ee6cf25b 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 2.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0685 95aecc216f1cd855f2bbccb7ee6cf25b 265 Pfam PF00106 short chain dehydrogenase 3 186 2.4E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0685 95aecc216f1cd855f2bbccb7ee6cf25b 265 SUPERFAMILY SSF51735 3 262 3.58E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0685 95aecc216f1cd855f2bbccb7ee6cf25b 265 Gene3D G3DSA:3.40.50.720 1 233 2.8E-47 T 12-10-2018 TDE_0788 daf155fb41dcf16c6d6da4765721fea0 37 SUPERFAMILY SSF57840 1 37 2.09E-16 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0788 daf155fb41dcf16c6d6da4765721fea0 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 8.4E-24 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0788 daf155fb41dcf16c6d6da4765721fea0 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.585 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0788 daf155fb41dcf16c6d6da4765721fea0 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0788 daf155fb41dcf16c6d6da4765721fea0 37 Pfam PF00444 Ribosomal protein L36 1 37 2.7E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0788 daf155fb41dcf16c6d6da4765721fea0 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 7.0E-9 T 12-10-2018 TDE_1368 c1afc6de20e0091e3e7c1d950c88a3b4 122 SUPERFAMILY SSF54427 5 117 2.39E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily TDE_1368 c1afc6de20e0091e3e7c1d950c88a3b4 122 Gene3D G3DSA:3.10.450.50 5 118 1.0E-23 T 12-10-2018 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 Pfam PF02743 Cache domain 62 316 8.8E-18 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 SMART SM00304 357 411 1.5E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 Pfam PF00672 HAMP domain 359 405 3.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 Gene3D G3DSA:1.10.287.950 479 698 8.2E-40 T 12-10-2018 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 Gene3D G3DSA:3.30.450.20 79 225 9.3E-59 T 12-10-2018 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 SUPERFAMILY SSF58104 465 700 4.05E-44 T 12-10-2018 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 SUPERFAMILY SSF58104 379 475 2.22E-6 T 12-10-2018 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 Gene3D G3DSA:3.30.450.20 73 327 9.3E-59 T 12-10-2018 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 SMART SM00283 454 701 2.9E-49 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 534 668 4.0E-25 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0640 d446ac507ef5c2e70e5cc982a8d13789 744 Gene3D G3DSA:1.10.287.950 357 477 6.9E-11 T 12-10-2018 TDE_0638 8a17c6075b71210b09d847e4559199b3 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 318 4.5E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0638 8a17c6075b71210b09d847e4559199b3 320 Gene3D G3DSA:1.10.3720.10 106 318 5.2E-21 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0638 8a17c6075b71210b09d847e4559199b3 320 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 42 77 1.5E-9 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TDE_0638 8a17c6075b71210b09d847e4559199b3 320 SUPERFAMILY SSF161098 114 300 3.79E-27 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0789 37c30e97920896bba770b380f86323ee 121 Gene3D G3DSA:1.10.8.50 1 71 1.7E-26 T 12-10-2018 TDE_0789 37c30e97920896bba770b380f86323ee 121 Gene3D G3DSA:4.10.910.10 72 121 2.0E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0789 37c30e97920896bba770b380f86323ee 121 SUPERFAMILY SSF46946 2 120 1.12E-41 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TDE_0789 37c30e97920896bba770b380f86323ee 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0789 37c30e97920896bba770b380f86323ee 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.3E-26 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0789 37c30e97920896bba770b380f86323ee 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 24.602 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0789 37c30e97920896bba770b380f86323ee 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.4E-52 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0789 37c30e97920896bba770b380f86323ee 121 PIRSF PIRSF002134 1 121 3.3E-41 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_2145 3bb099fadb5969e2e05a78f9d89fe533 366 SUPERFAMILY SSF56436 80 360 7.53E-40 T 12-10-2018 IPR016187 C-type lectin fold TDE_2145 3bb099fadb5969e2e05a78f9d89fe533 366 Gene3D G3DSA:3.90.1580.10 48 360 3.4E-58 T 12-10-2018 TDE_2145 3bb099fadb5969e2e05a78f9d89fe533 366 Pfam PF03781 Sulfatase-modifying factor enzyme 1 80 358 6.7E-35 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 Pfam PF00672 HAMP domain 311 355 1.6E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 Gene3D G3DSA:3.30.450.20 144 290 2.1E-23 T 12-10-2018 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 SUPERFAMILY SSF58104 418 651 5.49E-46 T 12-10-2018 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 SUPERFAMILY SSF103190 42 185 1.23E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 SUPERFAMILY SSF58104 331 432 2.62E-9 T 12-10-2018 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 SMART SM00304 309 363 1.5E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 Gene3D G3DSA:1.10.287.950 431 652 9.3E-44 T 12-10-2018 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 SMART SM00283 406 653 6.7E-66 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 Gene3D G3DSA:1.10.287.950 310 429 1.3E-11 T 12-10-2018 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 Pfam PF02743 Cache domain 37 271 2.8E-30 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_0178 c6629b2aa747b581e2cc453322a3b013 696 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 621 4.8E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0713 4cd29941b150068f78a45b7d2ce1e085 175 Pfam PF02357 Transcription termination factor nusG 2 101 6.9E-11 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TDE_0713 4cd29941b150068f78a45b7d2ce1e085 175 SUPERFAMILY SSF82679 1 106 1.96E-13 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TDE_0713 4cd29941b150068f78a45b7d2ce1e085 175 Gene3D G3DSA:3.30.70.940 1 106 1.5E-9 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TDE_0713 4cd29941b150068f78a45b7d2ce1e085 175 SUPERFAMILY SSF50104 117 170 4.96E-10 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily TDE_0713 4cd29941b150068f78a45b7d2ce1e085 175 Gene3D G3DSA:2.30.30.30 114 171 1.1E-11 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 TDE_0248 2b8aed7e75d86c4ce68b68149ff65a3d 122 Pfam PF04343 Protein of unknown function, DUF488 6 115 2.3E-25 T 12-10-2018 IPR007438 Protein of unknown function DUF488 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 Gene3D G3DSA:1.10.8.60 374 451 4.0E-25 T 12-10-2018 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 33 657 35.324 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 SUPERFAMILY SSF52540 202 468 2.55E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 149 644 1.3E-222 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 SUPERFAMILY SSF140990 454 648 7.32E-62 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 Pfam PF06480 FtsH Extracellular 39 144 1.1E-6 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 SMART SM00382 237 375 2.4E-25 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 Pfam PF01434 Peptidase family M41 434 643 2.6E-74 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 241 372 2.0E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 Gene3D G3DSA:1.20.58.760 454 657 1.3E-66 T 12-10-2018 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 Gene3D G3DSA:3.40.50.300 193 373 2.1E-68 T 12-10-2018 TDE_0470 c7f8c14040414fec65577c2e16a6c5c2 658 ProSitePatterns PS00674 AAA-protein family signature. 343 361 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TDE_1496 04f7bdd5081659fc6655eb2983d45f44 980 Gene3D G3DSA:3.40.50.300 1 252 6.4E-57 T 12-10-2018 TDE_1496 04f7bdd5081659fc6655eb2983d45f44 980 SUPERFAMILY SSF52540 1 909 3.54E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1496 04f7bdd5081659fc6655eb2983d45f44 980 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 917 2.9E-61 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TDE_1496 04f7bdd5081659fc6655eb2983d45f44 980 PIRSF PIRSF005719 1 501 1.7E-100 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein TDE_1496 04f7bdd5081659fc6655eb2983d45f44 980 PIRSF PIRSF005719 508 933 4.4E-101 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein TDE_1496 04f7bdd5081659fc6655eb2983d45f44 980 SUPERFAMILY SSF52540 523 919 5.71E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1496 04f7bdd5081659fc6655eb2983d45f44 980 Gene3D G3DSA:3.40.50.300 773 936 1.4E-47 T 12-10-2018 TDE_1496 04f7bdd5081659fc6655eb2983d45f44 980 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 926 18.122 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 TDE_0173 104fb3657f30017ffb804577f674d85c 846 SUPERFAMILY SSF52540 463 753 2.74E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0173 104fb3657f30017ffb804577f674d85c 846 Gene3D G3DSA:3.30.980.40 383 486 2.2E-30 T 12-10-2018 TDE_0173 104fb3657f30017ffb804577f674d85c 846 Pfam PF09397 Ftsk gamma domain 783 844 2.1E-30 T 12-10-2018 IPR018541 FtsK gamma domain TDE_0173 104fb3657f30017ffb804577f674d85c 846 Gene3D G3DSA:1.10.10.10 779 843 4.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0173 104fb3657f30017ffb804577f674d85c 846 Gene3D G3DSA:3.40.50.300 487 768 1.3E-100 T 12-10-2018 TDE_0173 104fb3657f30017ffb804577f674d85c 846 SMART SM00382 525 715 2.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0173 104fb3657f30017ffb804577f674d85c 846 SUPERFAMILY SSF46785 783 844 1.52E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0173 104fb3657f30017ffb804577f674d85c 846 Pfam PF01580 FtsK/SpoIIIE family 631 681 1.3E-10 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TDE_0173 104fb3657f30017ffb804577f674d85c 846 Pfam PF01580 FtsK/SpoIIIE family 495 628 2.1E-40 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TDE_0173 104fb3657f30017ffb804577f674d85c 846 SMART SM00843 782 846 5.4E-37 T 12-10-2018 IPR018541 FtsK gamma domain TDE_0606 df1c5576e098f7a55cd41f6a6b04ebc3 297 Pfam PF02195 ParB-like nuclease domain 37 125 1.8E-27 T 12-10-2018 IPR003115 ParB/Sulfiredoxin TDE_0606 df1c5576e098f7a55cd41f6a6b04ebc3 297 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 33 207 4.4E-56 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TDE_0606 df1c5576e098f7a55cd41f6a6b04ebc3 297 Gene3D G3DSA:1.10.10.2830 112 225 7.9E-36 T 12-10-2018 TDE_0606 df1c5576e098f7a55cd41f6a6b04ebc3 297 SUPERFAMILY SSF110849 37 170 2.98E-34 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TDE_0606 df1c5576e098f7a55cd41f6a6b04ebc3 297 SMART SM00470 35 125 2.4E-35 T 12-10-2018 IPR003115 ParB/Sulfiredoxin TDE_0606 df1c5576e098f7a55cd41f6a6b04ebc3 297 Gene3D G3DSA:3.90.1530.30 48 111 9.8E-26 T 12-10-2018 TDE_0089 c5e2c8e73123d35a7061d11f3825cf9b 559 Gene3D G3DSA:2.60.40.10 139 242 2.6E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_0089 c5e2c8e73123d35a7061d11f3825cf9b 559 SMART SM00460 418 480 1.6E-11 T 12-10-2018 IPR002931 Transglutaminase-like TDE_0089 c5e2c8e73123d35a7061d11f3825cf9b 559 Pfam PF01833 IPT/TIG domain 42 115 2.4E-7 T 12-10-2018 IPR002909 IPT domain TDE_0089 c5e2c8e73123d35a7061d11f3825cf9b 559 Pfam PF01841 Transglutaminase-like superfamily 374 477 7.7E-23 T 12-10-2018 IPR002931 Transglutaminase-like TDE_0089 c5e2c8e73123d35a7061d11f3825cf9b 559 SUPERFAMILY SSF54001 288 479 7.15E-27 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TDE_0089 c5e2c8e73123d35a7061d11f3825cf9b 559 Gene3D G3DSA:2.60.40.10 40 120 6.5E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_0089 c5e2c8e73123d35a7061d11f3825cf9b 559 SUPERFAMILY SSF81296 41 116 1.71E-11 T 12-10-2018 IPR014756 Immunoglobulin E-set TDE_0089 c5e2c8e73123d35a7061d11f3825cf9b 559 Gene3D G3DSA:3.10.620.30 322 489 4.2E-23 T 12-10-2018 TDE_1118 00d82eeb821b1361ca23838808553c83 459 PIRSF PIRSF001386 2 459 5.1E-217 T 12-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 TDE_1118 00d82eeb821b1361ca23838808553c83 459 Pfam PF01212 Beta-eliminating lyase 49 425 4.6E-100 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 TDE_1118 00d82eeb821b1361ca23838808553c83 459 Hamap MF_00543 Tyrosine phenol-lyase [tpl]. 4 459 80.546 T 12-10-2018 IPR013441 Tyrosine phenol-lyase GO:0006570|GO:0050371 KEGG: 00350+4.1.99.2 TDE_1118 00d82eeb821b1361ca23838808553c83 459 Gene3D G3DSA:3.40.640.10 61 313 2.6E-217 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_1118 00d82eeb821b1361ca23838808553c83 459 Gene3D G3DSA:3.90.1150.10 9 454 2.6E-217 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_1118 00d82eeb821b1361ca23838808553c83 459 SUPERFAMILY SSF53383 5 459 7.19E-141 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_1118 00d82eeb821b1361ca23838808553c83 459 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 250 268 - T 12-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 TDE_1118 00d82eeb821b1361ca23838808553c83 459 TIGRFAM TIGR02618 tyr_phenol_ly: tyrosine phenol-lyase 8 457 4.3E-271 T 12-10-2018 IPR013441 Tyrosine phenol-lyase GO:0006570|GO:0050371 KEGG: 00350+4.1.99.2 TDE_2730 15fb4157d13921bf57a9be4a5401920f 257 Gene3D G3DSA:3.20.20.140 1 255 5.5E-72 T 12-10-2018 TDE_2730 15fb4157d13921bf57a9be4a5401920f 257 SUPERFAMILY SSF51556 1 255 2.24E-70 T 12-10-2018 IPR032466 Metal-dependent hydrolase TDE_2730 15fb4157d13921bf57a9be4a5401920f 257 Pfam PF01026 TatD related DNase 4 253 8.2E-65 T 12-10-2018 IPR001130 TatD family GO:0016788 TDE_2730 15fb4157d13921bf57a9be4a5401920f 257 PIRSF PIRSF005902 1 257 7.2E-67 T 12-10-2018 IPR001130 TatD family GO:0016788 TDE_2730 15fb4157d13921bf57a9be4a5401920f 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 7.4E-78 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 TDE_1180 b5ba4af4d37ca0704a6b74c1a18cb3b0 304 SUPERFAMILY SSF53807 46 301 9.42E-52 T 12-10-2018 TDE_1180 b5ba4af4d37ca0704a6b74c1a18cb3b0 304 Gene3D G3DSA:3.40.50.1980 46 130 7.4E-22 T 12-10-2018 TDE_1180 b5ba4af4d37ca0704a6b74c1a18cb3b0 304 Gene3D G3DSA:3.40.50.1980 131 302 1.6E-43 T 12-10-2018 TDE_1180 b5ba4af4d37ca0704a6b74c1a18cb3b0 304 Pfam PF01497 Periplasmic binding protein 59 277 3.7E-28 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 Gene3D G3DSA:3.40.190.10 90 290 1.5E-33 T 12-10-2018 TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 Gene3D G3DSA:1.10.10.10 1 89 3.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 SUPERFAMILY SSF53850 86 290 2.37E-28 T 12-10-2018 TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 SUPERFAMILY SSF46785 1 82 9.33E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 Gene3D G3DSA:3.40.190.10 161 268 1.5E-33 T 12-10-2018 TDE_0400 356a0a5ae9b474c4ffc7d7ac2e25481a 306 Pfam PF03466 LysR substrate binding domain 86 289 3.3E-33 T 12-10-2018 IPR005119 LysR, substrate-binding TDE_1395 3fc50768ef8ccf118477b6999fc4b976 627 Pfam PF09095 Domain of unknown function (DUF1926) 421 581 1.6E-10 T 12-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 TDE_1395 3fc50768ef8ccf118477b6999fc4b976 627 Gene3D G3DSA:3.20.110.20 5 355 6.3E-53 T 12-10-2018 TDE_1395 3fc50768ef8ccf118477b6999fc4b976 627 Pfam PF03065 Glycosyl hydrolase family 57 30 255 3.3E-21 T 12-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 TDE_1395 3fc50768ef8ccf118477b6999fc4b976 627 SUPERFAMILY SSF88713 9 271 7.05E-51 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TDE_1395 3fc50768ef8ccf118477b6999fc4b976 627 SUPERFAMILY SSF74650 367 579 1.82E-46 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TDE_1395 3fc50768ef8ccf118477b6999fc4b976 627 Gene3D G3DSA:2.70.98.10 418 591 1.9E-7 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TDE_1198 534901ca6e08bb1ec2670debf9957fdc 315 Pfam PF01795 MraW methylase family 4 310 1.6E-117 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TDE_1198 534901ca6e08bb1ec2670debf9957fdc 315 Gene3D G3DSA:3.40.50.150 5 306 8.1E-91 T 12-10-2018 TDE_1198 534901ca6e08bb1ec2670debf9957fdc 315 Gene3D G3DSA:1.10.150.170 111 216 8.1E-91 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TDE_1198 534901ca6e08bb1ec2670debf9957fdc 315 SUPERFAMILY SSF53335 5 310 2.06E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1198 534901ca6e08bb1ec2670debf9957fdc 315 PIRSF PIRSF004486 1 311 3.4E-113 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TDE_1198 534901ca6e08bb1ec2670debf9957fdc 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 310 34.404 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TDE_1198 534901ca6e08bb1ec2670debf9957fdc 315 SUPERFAMILY SSF81799 113 214 4.97E-33 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TDE_1198 534901ca6e08bb1ec2670debf9957fdc 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 309 3.3E-100 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TDE_0667 b00a3d604fbe8ca95a4c8a6385d24f18 488 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 459 5.8E-69 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TDE_0667 b00a3d604fbe8ca95a4c8a6385d24f18 488 SUPERFAMILY SSF101960 54 485 9.55E-130 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily TDE_0667 b00a3d604fbe8ca95a4c8a6385d24f18 488 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 34 479 1.0E-206 T 12-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1376 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 SMART SM00663 224 503 3.6E-170 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Gene3D G3DSA:1.10.132.30 618 759 2.6E-59 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1386 18.737 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Gene3D G3DSA:1.10.274.100 479 552 1.8E-17 T 12-10-2018 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 SUPERFAMILY SSF64484 6 1376 0.0 T 12-10-2018 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Gene3D G3DSA:1.10.1790.20 1144 1323 2.2E-62 T 12-10-2018 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Gene3D G3DSA:2.40.50.100 1160 1224 2.2E-62 T 12-10-2018 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Gene3D G3DSA:1.10.150.390 1325 1387 2.4E-28 T 12-10-2018 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Gene3D G3DSA:2.40.50.100 1042 1135 1.7E-23 T 12-10-2018 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Pfam PF00623 RNA polymerase Rpb1, domain 2 383 474 2.0E-26 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 383 2.4E-8 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Pfam PF05000 RNA polymerase Rpb1, domain 4 653 723 1.3E-13 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Gene3D G3DSA:1.10.40.90 363 405 9.0E-17 T 12-10-2018 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 624 1.9E-20 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Pfam PF04998 RNA polymerase Rpb1, domain 5 735 1324 3.4E-75 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_2420 b0800022304b9ff7ccef787558e503b5 1424 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 4.7E-89 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 Gene3D G3DSA:3.40.50.300 256 474 8.3E-49 T 12-10-2018 TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 SUPERFAMILY SSF52540 2 229 2.66E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 SUPERFAMILY SSF52540 264 469 3.78E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 Gene3D G3DSA:3.40.50.300 1 242 2.5E-58 T 12-10-2018 TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 Pfam PF00005 ABC transporter 19 169 1.8E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 Pfam PF00005 ABC transporter 284 423 1.6E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 SMART SM00382 293 473 8.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0255 8aa4314f275a9ea8607c6e67e1a1859f 474 SMART SM00382 27 217 4.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 SUPERFAMILY SSF51445 321 647 5.33E-97 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 26 282 4.1E-73 T 12-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 PIRSF PIRSF005536 1 706 2.8E-235 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 Gene3D G3DSA:3.20.20.70 307 627 5.6E-123 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 ProSitePatterns PS00512 Alpha-galactosidase signature. 356 371 - T 12-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 355 370 1.0E-55 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 515 531 1.0E-55 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 463 478 1.0E-55 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 289 309 1.0E-55 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 327 341 1.0E-55 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 405 427 1.0E-55 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 540 556 1.0E-55 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 PRINTS PR00743 Glycosyl hydrolase family 36 signature 238 253 1.0E-55 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 Gene3D G3DSA:2.70.98.60 1 305 8.1E-96 T 12-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_1453 a7d655f77f43cf7caa500363694ab8cd 774 Pfam PF02065 Melibiase 286 630 7.6E-141 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TDE_2055 86c8d22b6744e918709f8c5c595f3742 403 Gene3D G3DSA:2.40.128.20 32 210 9.8E-23 T 12-10-2018 IPR012674 Calycin TDE_2055 86c8d22b6744e918709f8c5c595f3742 403 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 40 207 1.4E-18 T 12-10-2018 IPR015304 ZinT domain GO:0008270 TDE_2055 86c8d22b6744e918709f8c5c595f3742 403 SUPERFAMILY SSF50814 27 210 2.35E-44 T 12-10-2018 IPR012674 Calycin TDE_0818 366dccab0731876420e16c858d1882ef 573 SMART SM00382 355 541 4.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0818 366dccab0731876420e16c858d1882ef 573 SUPERFAMILY SSF90123 7 316 4.84E-41 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0818 366dccab0731876420e16c858d1882ef 573 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0818 366dccab0731876420e16c858d1882ef 573 Pfam PF00664 ABC transporter transmembrane region 24 271 2.7E-17 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0818 366dccab0731876420e16c858d1882ef 573 Gene3D G3DSA:3.40.50.300 322 572 3.0E-87 T 12-10-2018 TDE_0818 366dccab0731876420e16c858d1882ef 573 Pfam PF00005 ABC transporter 347 493 5.9E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0818 366dccab0731876420e16c858d1882ef 573 SUPERFAMILY SSF52540 325 563 4.07E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0818 366dccab0731876420e16c858d1882ef 573 Gene3D G3DSA:1.20.1560.10 1 321 5.7E-31 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1001 49ed51f501f48b4d0758e62ded2a703f 234 Gene3D G3DSA:3.40.50.2020 1 232 7.9E-46 T 12-10-2018 TDE_1001 49ed51f501f48b4d0758e62ded2a703f 234 Pfam PF00156 Phosphoribosyl transferase domain 53 161 1.5E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TDE_1001 49ed51f501f48b4d0758e62ded2a703f 234 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 234 24.424 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_1001 49ed51f501f48b4d0758e62ded2a703f 234 SUPERFAMILY SSF53271 25 230 3.93E-40 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like TDE_0359 ff15bfd72755ea19f19c7250e905ddb1 635 Gene3D G3DSA:3.40.50.300 392 633 3.7E-83 T 12-10-2018 TDE_0359 ff15bfd72755ea19f19c7250e905ddb1 635 ProSitePatterns PS00211 ABC transporters family signature. 533 547 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0359 ff15bfd72755ea19f19c7250e905ddb1 635 SMART SM00382 421 607 2.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0359 ff15bfd72755ea19f19c7250e905ddb1 635 SUPERFAMILY SSF90123 19 348 1.15E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0359 ff15bfd72755ea19f19c7250e905ddb1 635 Pfam PF00005 ABC transporter 412 561 3.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0359 ff15bfd72755ea19f19c7250e905ddb1 635 Pfam PF00664 ABC transporter transmembrane region 33 294 2.0E-51 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0359 ff15bfd72755ea19f19c7250e905ddb1 635 Gene3D G3DSA:1.20.1560.10 2 351 1.7E-92 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0359 ff15bfd72755ea19f19c7250e905ddb1 635 SUPERFAMILY SSF52540 385 629 7.46E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 Pfam PF00574 Clp protease 14 193 3.6E-82 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 3.7E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 3.7E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 3.7E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 3.7E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 PRINTS PR00127 Clp protease catalytic subunit P signature 20 35 3.7E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 3 193 1.5E-97 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 Gene3D G3DSA:3.90.226.10 1 196 1.8E-83 T 12-10-2018 TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 194 41.923 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 SUPERFAMILY SSF52096 12 194 2.07E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_1672 85f69099d2fcd7c29287902127d74ff8 197 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 12-10-2018 IPR033135 ClpP, histidine active site TDE_0977 1105d355de2599826179adeffdd0a592 381 Gene3D G3DSA:3.90.1580.10 83 381 1.9E-66 T 12-10-2018 TDE_0977 1105d355de2599826179adeffdd0a592 381 Pfam PF03781 Sulfatase-modifying factor enzyme 1 98 379 4.8E-38 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_0977 1105d355de2599826179adeffdd0a592 381 SUPERFAMILY SSF56436 95 379 1.37E-46 T 12-10-2018 IPR016187 C-type lectin fold TDE_1228 bc0b065a26bc4f94ea50db5b7c5a8c27 175 SUPERFAMILY SSF141571 23 170 1.96E-23 T 12-10-2018 TDE_1228 bc0b065a26bc4f94ea50db5b7c5a8c27 175 Gene3D G3DSA:2.160.20.100 3 172 1.3E-21 T 12-10-2018 TDE_1228 bc0b065a26bc4f94ea50db5b7c5a8c27 175 Pfam PF13599 Pentapeptide repeats (9 copies) 42 110 8.3E-9 T 12-10-2018 IPR001646 Pentapeptide repeat TDE_1647 077c0090bbfb5742788d7e85666f12f0 115 Gene3D G3DSA:1.10.260.40 57 113 1.9E-13 T 12-10-2018 TDE_1647 077c0090bbfb5742788d7e85666f12f0 115 Pfam PF01381 Helix-turn-helix 60 109 2.8E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1647 077c0090bbfb5742788d7e85666f12f0 115 SMART SM00530 59 113 6.4E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1647 077c0090bbfb5742788d7e85666f12f0 115 SUPERFAMILY SSF47413 60 113 3.75E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_2495 da8bbaaab840bf25fb24959d7b2a2703 772 Pfam PF03781 Sulfatase-modifying factor enzyme 1 528 769 8.4E-34 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_2495 da8bbaaab840bf25fb24959d7b2a2703 772 SUPERFAMILY SSF56436 519 770 8.48E-40 T 12-10-2018 IPR016187 C-type lectin fold TDE_2495 da8bbaaab840bf25fb24959d7b2a2703 772 Gene3D G3DSA:3.90.1580.10 507 772 2.8E-75 T 12-10-2018 TDE_1324 e824aa9d6f7b1a12151cf04d9f1045fa 231 Pfam PF04773 FecR protein 55 134 1.3E-10 T 12-10-2018 IPR006860 FecR protein TDE_0110 e50d1adf012c714e04044d39c8b6e8d7 343 Gene3D G3DSA:2.70.70.10 178 338 1.2E-47 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_0110 e50d1adf012c714e04044d39c8b6e8d7 343 Pfam PF01551 Peptidase family M23 235 330 6.1E-32 T 12-10-2018 IPR016047 Peptidase M23 TDE_0110 e50d1adf012c714e04044d39c8b6e8d7 343 SUPERFAMILY SSF51261 180 334 4.87E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_1274 f7b078fa341e2c9386f19745c01ddbea 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 301 1.7E-35 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_1274 f7b078fa341e2c9386f19745c01ddbea 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 75 2.1E-8 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TDE_1274 f7b078fa341e2c9386f19745c01ddbea 305 Gene3D G3DSA:1.10.3720.10 90 297 5.5E-28 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1274 f7b078fa341e2c9386f19745c01ddbea 305 SUPERFAMILY SSF161098 93 285 2.35E-33 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1007 bfba781fb56fb35f2f9bd3c1eefd7060 264 SUPERFAMILY SSF117143 94 224 1.44E-31 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TDE_1007 bfba781fb56fb35f2f9bd3c1eefd7060 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 150 245 3.0E-28 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TDE_1007 bfba781fb56fb35f2f9bd3c1eefd7060 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 6.6E-47 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TDE_1007 bfba781fb56fb35f2f9bd3c1eefd7060 264 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.7E-115 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 TDE_1007 bfba781fb56fb35f2f9bd3c1eefd7060 264 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TDE_1007 bfba781fb56fb35f2f9bd3c1eefd7060 264 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TDE_1007 bfba781fb56fb35f2f9bd3c1eefd7060 264 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 262 1.2E-23 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 684 703 1.7E-50 T 12-10-2018 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 363 382 1.7E-50 T 12-10-2018 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 714 733 1.7E-50 T 12-10-2018 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 605 621 1.7E-50 T 12-10-2018 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 737 755 1.7E-50 T 12-10-2018 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 PIRSF PIRSF001174 4 785 1.8E-299 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 SUPERFAMILY SSF52540 320 595 1.5E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 Gene3D G3DSA:1.10.8.60 499 594 7.0E-28 T 12-10-2018 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 580 782 7.9E-79 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 18 207 3.9E-37 T 12-10-2018 IPR003111 Lon, substrate-binding domain TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 SUPERFAMILY SSF88697 18 207 3.48E-34 T 12-10-2018 IPR015947 PUA-like superfamily TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 Gene3D G3DSA:3.30.230.10 597 790 5.9E-75 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 SUPERFAMILY SSF54211 605 782 4.55E-50 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 TIGRFAM TIGR00763 lon: endopeptidase La 20 782 2.3E-290 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 Gene3D G3DSA:1.20.58.1480 127 250 4.0E-33 T 12-10-2018 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 359 496 7.3E-21 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 Gene3D G3DSA:2.30.130.40 9 124 1.3E-22 T 12-10-2018 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 687 695 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 SMART SM00382 355 500 3.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 Gene3D G3DSA:3.40.50.300 320 498 1.6E-63 T 12-10-2018 TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 SMART SM00464 17 208 1.5E-55 T 12-10-2018 IPR003111 Lon, substrate-binding domain TDE_0670 f0f81914a886b6805dcdc8a66d465cea 791 Hamap MF_01973 Lon protease [lon]. 18 783 64.184 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 TDE_0061 8423ebcb26a83fa82ddf58f7395c1f08 348 SUPERFAMILY SSF140931 84 279 3.27E-39 T 12-10-2018 IPR036597 Fido-like domain superfamily TDE_0061 8423ebcb26a83fa82ddf58f7395c1f08 348 Pfam PF02661 Fic/DOC family 107 215 2.3E-19 T 12-10-2018 IPR003812 Fido domain TDE_0061 8423ebcb26a83fa82ddf58f7395c1f08 348 Gene3D G3DSA:1.10.3290.10 21 285 2.0E-55 T 12-10-2018 IPR036597 Fido-like domain superfamily TDE_1519 ec5c5c035044f2315b679196d1fe0b0d 223 Pfam PF10016 Predicted secreted protein (DUF2259) 38 222 8.1E-20 T 12-10-2018 IPR018725 Protein of unknown function DUF2259, secreted TDE_1634 00c6574eddd3a1c2780478173cf35b48 92 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 16 90 8.8E-16 T 12-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system TDE_1858 9baf040c75c1c68d43fe38f63231a23d 104 Gene3D G3DSA:1.10.10.10 3 103 8.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1858 9baf040c75c1c68d43fe38f63231a23d 104 Pfam PF03551 Transcriptional regulator PadR-like family 14 80 7.5E-19 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal TDE_1858 9baf040c75c1c68d43fe38f63231a23d 104 SUPERFAMILY SSF46785 1 101 3.13E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_2564 4ae46fb86db928919ed3badf575ccb59 112 PIRSF PIRSF033490 1 112 2.4E-31 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TDE_2564 4ae46fb86db928919ed3badf575ccb59 112 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 109 6.7E-24 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TDE_2564 4ae46fb86db928919ed3badf575ccb59 112 Gene3D G3DSA:2.30.30.110 1 111 1.4E-34 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TDE_2564 4ae46fb86db928919ed3badf575ccb59 112 SUPERFAMILY SSF50118 1 110 1.37E-27 T 12-10-2018 TDE_1487 c9f2f5b55477acd2738e4e558e326f7d 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.637 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TDE_1487 c9f2f5b55477acd2738e4e558e326f7d 247 Gene3D G3DSA:3.30.70.980 130 205 4.9E-55 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TDE_1487 c9f2f5b55477acd2738e4e558e326f7d 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.0E-106 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TDE_1487 c9f2f5b55477acd2738e4e558e326f7d 247 Gene3D G3DSA:3.30.70.980 86 236 4.9E-55 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TDE_1487 c9f2f5b55477acd2738e4e558e326f7d 247 Pfam PF01709 Transcriptional regulator 5 237 1.5E-99 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TDE_1487 c9f2f5b55477acd2738e4e558e326f7d 247 Gene3D G3DSA:1.10.10.200 1 79 8.9E-37 T 12-10-2018 IPR017856 Integrase-like, N-terminal TDE_1487 c9f2f5b55477acd2738e4e558e326f7d 247 SUPERFAMILY SSF75625 3 241 2.49E-97 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TDE_2035 f2dc7e8ba960fceac57e1788fcd2d936 424 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TDE_2035 f2dc7e8ba960fceac57e1788fcd2d936 424 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TDE_2035 f2dc7e8ba960fceac57e1788fcd2d936 424 SUPERFAMILY SSF53448 3 387 1.2E-76 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_2035 f2dc7e8ba960fceac57e1788fcd2d936 424 Pfam PF00483 Nucleotidyl transferase 6 271 1.1E-63 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TDE_2035 f2dc7e8ba960fceac57e1788fcd2d936 424 SUPERFAMILY SSF51161 292 423 5.98E-22 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily TDE_2035 f2dc7e8ba960fceac57e1788fcd2d936 424 Gene3D G3DSA:2.160.10.10 292 424 1.2E-39 T 12-10-2018 TDE_2035 f2dc7e8ba960fceac57e1788fcd2d936 424 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TDE_2035 f2dc7e8ba960fceac57e1788fcd2d936 424 Gene3D G3DSA:3.90.550.10 1 291 4.9E-92 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_2035 f2dc7e8ba960fceac57e1788fcd2d936 424 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 390 1.9E-136 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TDE_2407 5cc42fa13af884debbc810a107479d9a 487 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 14 473 44.196 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TDE_2407 5cc42fa13af884debbc810a107479d9a 487 Gene3D G3DSA:3.60.20.10 39 475 7.3E-151 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TDE_2407 5cc42fa13af884debbc810a107479d9a 487 Gene3D G3DSA:3.40.50.2020 290 454 7.3E-151 T 12-10-2018 TDE_2407 5cc42fa13af884debbc810a107479d9a 487 Pfam PF13537 Glutamine amidotransferase domain 107 228 2.5E-19 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TDE_2407 5cc42fa13af884debbc810a107479d9a 487 Pfam PF00156 Phosphoribosyl transferase domain 303 401 5.2E-8 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TDE_2407 5cc42fa13af884debbc810a107479d9a 487 SUPERFAMILY SSF56235 15 272 1.12E-60 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TDE_2407 5cc42fa13af884debbc810a107479d9a 487 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 41 474 7.5E-146 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TDE_2407 5cc42fa13af884debbc810a107479d9a 487 SUPERFAMILY SSF53271 265 480 4.2E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like TDE_2407 5cc42fa13af884debbc810a107479d9a 487 PIRSF PIRSF000485 11 487 8.0E-194 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TDE_2271 494d11ff6a8630f3aae3c960aeabf350 194 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 190 1.5E-55 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TDE_2271 494d11ff6a8630f3aae3c960aeabf350 194 Pfam PF01725 Ham1 family 3 186 7.8E-56 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TDE_2271 494d11ff6a8630f3aae3c960aeabf350 194 SUPERFAMILY SSF52972 1 191 4.97E-61 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TDE_2271 494d11ff6a8630f3aae3c960aeabf350 194 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 193 48.389 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 TDE_2271 494d11ff6a8630f3aae3c960aeabf350 194 Gene3D G3DSA:3.90.950.10 1 194 1.8E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TDE_2051 585f30c8e8dc4d6f108b89b6c8acb9fe 102 Gene3D G3DSA:3.10.450.530 2 92 9.3E-18 T 12-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily TDE_2051 585f30c8e8dc4d6f108b89b6c8acb9fe 102 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 13 89 2.7E-26 T 12-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system TDE_2484 8d3d968e4029be1c74f1e5c0a6a97afe 355 Gene3D G3DSA:2.20.28.30 67 108 2.4E-6 T 12-10-2018 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 1 404 3.4E-129 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 Gene3D G3DSA:3.10.290.10 324 404 2.8E-19 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 SUPERFAMILY SSF55174 297 404 2.35E-16 T 12-10-2018 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 SUPERFAMILY SSF52374 2 315 9.38E-97 T 12-10-2018 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 8.2E-26 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 8.2E-26 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 8.2E-26 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 8.2E-26 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 405 41.467 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 Pfam PF00579 tRNA synthetases class I (W and Y) 29 316 2.9E-83 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 Gene3D G3DSA:3.40.50.620 1 220 7.8E-83 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_0861 ded85ab95824b7e3422fd8b90ea33cfd 406 Gene3D G3DSA:1.10.240.10 221 323 4.2E-31 T 12-10-2018 TDE_0641 1f03c7178255ccf7e978e7526a287f52 426 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 36.904 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_0641 1f03c7178255ccf7e978e7526a287f52 426 Gene3D G3DSA:3.65.10.10 6 421 7.4E-152 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TDE_0641 1f03c7178255ccf7e978e7526a287f52 426 Gene3D G3DSA:3.65.10.10 21 228 7.4E-152 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TDE_0641 1f03c7178255ccf7e978e7526a287f52 426 SUPERFAMILY SSF55205 1 423 6.21E-110 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TDE_0641 1f03c7178255ccf7e978e7526a287f52 426 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 2.4E-155 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_0641 1f03c7178255ccf7e978e7526a287f52 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 3.0E-68 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 319 343 5.7E-13 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 182 204 5.7E-13 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 464 482 5.7E-13 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 58 168 1.5E-40 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 Gene3D G3DSA:3.50.50.60 281 434 2.4E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 Gene3D G3DSA:1.10.1060.10 36 182 1.7E-41 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 SUPERFAMILY SSF46548 38 191 1.94E-36 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 51 500 3.2E-199 T 12-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 181 489 1.4E-37 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 SUPERFAMILY SSF51971 179 434 9.42E-64 T 12-10-2018 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 Gene3D G3DSA:3.50.50.60 184 496 2.4E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 454 476 2.4E-19 T 12-10-2018 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 426 442 2.4E-19 T 12-10-2018 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 323 341 2.4E-19 T 12-10-2018 TDE_0407 a90a25f63cd668ab7477285a89d1ac0b 503 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 202 2.4E-19 T 12-10-2018 TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 Gene3D G3DSA:3.30.565.10 3 218 9.1E-76 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 Gene3D G3DSA:3.30.70.2140 219 244 9.1E-76 T 12-10-2018 TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 SUPERFAMILY SSF54211 242 497 6.14E-92 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 162 2.3E-12 T 12-10-2018 TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 PIRSF PIRSF002583 1 640 1.6E-208 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 SUPERFAMILY SSF110942 523 637 2.09E-36 T 12-10-2018 IPR037196 HSP90, C-terminal domain TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 Gene3D G3DSA:3.40.50.11260 409 498 4.1E-28 T 12-10-2018 TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 637 30.777 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 Pfam PF00183 Hsp90 protein 223 637 3.8E-121 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 SUPERFAMILY SSF55874 2 219 6.55E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 Gene3D G3DSA:3.30.230.80 258 408 7.1E-63 T 12-10-2018 TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 PRINTS PR00775 90kDa heat shock protein signature 178 195 1.5E-60 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 PRINTS PR00775 90kDa heat shock protein signature 72 89 1.5E-60 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 PRINTS PR00775 90kDa heat shock protein signature 90 107 1.5E-60 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 PRINTS PR00775 90kDa heat shock protein signature 2 22 1.5E-60 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 PRINTS PR00775 90kDa heat shock protein signature 196 214 1.5E-60 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 PRINTS PR00775 90kDa heat shock protein signature 117 139 1.5E-60 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 PRINTS PR00775 90kDa heat shock protein signature 23 45 1.5E-60 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TDE_2480 371041ccc37e395d06621ec4d8b67f80 640 Gene3D G3DSA:1.20.120.790 504 638 2.5E-45 T 12-10-2018 IPR037196 HSP90, C-terminal domain TDE_2088 16976718ea075a75bf09cd895ed23bc4 119 Gene3D G3DSA:1.20.120.910 1 118 3.4E-30 T 12-10-2018 TDE_2088 16976718ea075a75bf09cd895ed23bc4 119 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 80 115 2.4E-12 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TDE_2088 16976718ea075a75bf09cd895ed23bc4 119 SUPERFAMILY SSF57716 82 116 3.14E-8 T 12-10-2018 TDE_2088 16976718ea075a75bf09cd895ed23bc4 119 SUPERFAMILY SSF109635 1 80 1.57E-12 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily TDE_1225 70ef6974a7301cd220aed3f349f4a4d8 255 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1225 70ef6974a7301cd220aed3f349f4a4d8 255 SMART SM00382 40 225 3.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1225 70ef6974a7301cd220aed3f349f4a4d8 255 SUPERFAMILY SSF52540 16 241 1.11E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1225 70ef6974a7301cd220aed3f349f4a4d8 255 Pfam PF00005 ABC transporter 33 176 1.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1225 70ef6974a7301cd220aed3f349f4a4d8 255 Gene3D G3DSA:3.40.50.300 3 255 6.5E-67 T 12-10-2018 TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 164 184 6.9E-29 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 185 203 6.9E-29 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 6.9E-29 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 213 228 6.9E-29 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 ProSitePatterns PS00905 GTP1/OBG family signature. 215 228 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 SUPERFAMILY SSF52540 153 337 1.6E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 326 1.4E-123 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 Hamap MF_01454 GTPase Obg [obg]. 3 328 43.213 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 PIRSF PIRSF002401 1 375 1.6E-129 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 Pfam PF01018 GTP1/OBG 6 159 2.9E-52 T 12-10-2018 IPR006169 GTP1/OBG domain TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 SUPERFAMILY SSF82051 3 159 9.42E-48 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 Gene3D G3DSA:3.40.50.300 161 340 4.3E-45 T 12-10-2018 TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 Gene3D G3DSA:2.70.210.12 1 160 2.1E-49 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily TDE_1748 d608b206625d63bcc913e122fb42cd6b 382 Pfam PF01926 50S ribosome-binding GTPase 163 283 1.0E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 Gene3D G3DSA:3.30.420.40 5 373 4.6E-156 T 12-10-2018 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 Gene3D G3DSA:1.20.1270.10 518 601 3.2E-27 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 598 0.0 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 Gene3D G3DSA:3.30.420.40 177 360 4.6E-156 T 12-10-2018 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 640 37.863 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 PRINTS PR00301 70kDa heat shock protein signature 135 155 8.6E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.6E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 PRINTS PR00301 70kDa heat shock protein signature 359 379 8.6E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 PRINTS PR00301 70kDa heat shock protein signature 196 206 8.6E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 PRINTS PR00301 70kDa heat shock protein signature 328 344 8.6E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 PRINTS PR00301 70kDa heat shock protein signature 382 401 8.6E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 PRINTS PR00301 70kDa heat shock protein signature 463 479 8.6E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.6E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.6E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 Gene3D G3DSA:2.60.34.10 378 517 2.1E-65 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 Pfam PF00012 Hsp70 protein 4 598 5.4E-268 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 SUPERFAMILY SSF53067 1 180 2.45E-61 T 12-10-2018 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 Gene3D G3DSA:3.90.640.10 223 310 4.6E-156 T 12-10-2018 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 SUPERFAMILY SSF100934 501 603 1.28E-17 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 SUPERFAMILY SSF53067 184 376 1.75E-69 T 12-10-2018 TDE_0628 0bdeb67aa331bdb75f51d4a1553be35c 646 SUPERFAMILY SSF100920 378 534 4.32E-63 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 PIRSF PIRSF006485 29 474 8.6E-139 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 31 466 8.1E-143 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 SUPERFAMILY SSF52540 33 193 4.43E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 Gene3D G3DSA:3.40.50.300 25 199 6.9E-34 T 12-10-2018 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 375 1.3E-32 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 32 190 6.4E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 Gene3D G3DSA:3.30.300.20 386 469 7.4E-22 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 Hamap MF_00195 GTPase Der [der]. 30 469 32.251 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 Pfam PF01926 50S ribosome-binding GTPase 210 328 7.6E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 Pfam PF01926 50S ribosome-binding GTPase 33 152 1.1E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 386 466 5.4E-22 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 33 53 4.0E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 106 124 4.0E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 Gene3D G3DSA:3.40.50.300 203 384 3.3E-49 T 12-10-2018 TDE_0083 ddd030f1fc635779cc5a8b7d90563438 476 SUPERFAMILY SSF52540 173 468 7.02E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0655 2a3a8de99713be8614b72ddec1173c10 232 SMART SM00448 5 115 1.5E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0655 2a3a8de99713be8614b72ddec1173c10 232 SMART SM00862 149 225 2.9E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TDE_0655 2a3a8de99713be8614b72ddec1173c10 232 SUPERFAMILY SSF52172 5 130 8.68E-35 T 12-10-2018 IPR011006 CheY-like superfamily TDE_0655 2a3a8de99713be8614b72ddec1173c10 232 Gene3D G3DSA:1.10.10.10 126 232 2.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0655 2a3a8de99713be8614b72ddec1173c10 232 Gene3D G3DSA:3.40.50.2300 4 125 5.5E-33 T 12-10-2018 TDE_0655 2a3a8de99713be8614b72ddec1173c10 232 Pfam PF00072 Response regulator receiver domain 7 115 8.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0655 2a3a8de99713be8614b72ddec1173c10 232 SUPERFAMILY SSF46894 131 226 4.54E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TDE_0655 2a3a8de99713be8614b72ddec1173c10 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 5.5E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TDE_0194 379147dee2b37265a7f21748e15a5bd3 380 SUPERFAMILY SSF53300 225 375 4.77E-24 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_0194 379147dee2b37265a7f21748e15a5bd3 380 Gene3D G3DSA:3.40.50.410 212 378 1.1E-9 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_1545 ff63c25e4c20062d13ea5022c46999be 200 Gene3D G3DSA:3.40.50.2020 1 194 4.4E-24 T 12-10-2018 TDE_1545 ff63c25e4c20062d13ea5022c46999be 200 SUPERFAMILY SSF53271 3 182 5.4E-21 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like TDE_1545 ff63c25e4c20062d13ea5022c46999be 200 Pfam PF00156 Phosphoribosyl transferase domain 17 140 2.7E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TDE_0825 44f126133132191e3714f269376d5155 532 Gene3D G3DSA:3.40.1190.10 116 369 7.8E-63 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_0825 44f126133132191e3714f269376d5155 532 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 11 524 29.616 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TDE_0825 44f126133132191e3714f269376d5155 532 Pfam PF08245 Mur ligase middle domain 125 344 2.0E-40 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TDE_0825 44f126133132191e3714f269376d5155 532 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 47 524 8.2E-148 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TDE_0825 44f126133132191e3714f269376d5155 532 Gene3D G3DSA:3.90.190.20 370 527 5.2E-47 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_0825 44f126133132191e3714f269376d5155 532 Pfam PF01225 Mur ligase family, catalytic domain 46 86 1.9E-6 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TDE_0825 44f126133132191e3714f269376d5155 532 SUPERFAMILY SSF53623 116 364 7.72E-50 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_0825 44f126133132191e3714f269376d5155 532 SUPERFAMILY SSF63418 20 114 4.84E-16 T 12-10-2018 IPR035911 MurE/MurF, N-terminal TDE_0825 44f126133132191e3714f269376d5155 532 SUPERFAMILY SSF53244 366 525 1.05E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_0825 44f126133132191e3714f269376d5155 532 Gene3D G3DSA:3.40.1390.10 6 115 1.2E-15 T 12-10-2018 TDE_0825 44f126133132191e3714f269376d5155 532 Pfam PF02875 Mur ligase family, glutamate ligase domain 366 452 1.2E-15 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Gene3D G3DSA:3.30.1360.40 240 337 6.1E-205 T 12-10-2018 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 812 23.887 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 474 5.8E-156 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 616 659 5.6E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 510 553 1.5E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 810 2.7E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 663 709 3.1E-14 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 559 608 3.3E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 715 760 9.7E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 SUPERFAMILY SSF101904 504 813 6.15E-98 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Gene3D G3DSA:3.90.199.10 36 491 6.1E-205 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 810 0.0 T 12-10-2018 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Gene3D G3DSA:1.10.268.10 374 462 6.1E-205 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 Gene3D G3DSA:2.120.10.90 501 809 6.2E-112 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 SUPERFAMILY SSF56719 34 492 1.96E-168 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TDE_0295 a2af8bb87e1fe0ab6e657b86259405b2 815 SMART SM00434 15 469 1.4E-278 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 SUPERFAMILY SSF81340 15 432 1.15E-90 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 Pfam PF02080 TrkA-C domain 454 510 9.5E-12 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 Gene3D G3DSA:3.30.70.1450 451 517 2.8E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 PRINTS PR00762 Chloride channel signature 171 190 9.2E-15 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 PRINTS PR00762 Chloride channel signature 91 108 9.2E-15 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 PRINTS PR00762 Chloride channel signature 334 354 9.2E-15 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 PRINTS PR00762 Chloride channel signature 387 406 9.2E-15 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 SUPERFAMILY SSF116726 449 514 1.57E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 Pfam PF00654 Voltage gated chloride channel 79 419 1.5E-76 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TDE_2179 e7c7198b2b55886501bdc01e65a30bd8 528 Gene3D G3DSA:1.10.3080.10 20 450 1.7E-86 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 TDE_0572 f5647790aa54b92c84fb5f8f3b8f9db7 386 Gene3D G3DSA:3.90.1580.10 83 386 2.4E-70 T 12-10-2018 TDE_0572 f5647790aa54b92c84fb5f8f3b8f9db7 386 SUPERFAMILY SSF56436 98 384 1.15E-48 T 12-10-2018 IPR016187 C-type lectin fold TDE_0572 f5647790aa54b92c84fb5f8f3b8f9db7 386 Pfam PF03781 Sulfatase-modifying factor enzyme 1 99 384 7.5E-39 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_2114 5a89ca68b9fbe7628a5bdb5a8e7cab81 261 Gene3D G3DSA:3.40.50.300 1 234 2.1E-54 T 12-10-2018 TDE_2114 5a89ca68b9fbe7628a5bdb5a8e7cab81 261 SUPERFAMILY SSF52540 2 225 8.65E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2114 5a89ca68b9fbe7628a5bdb5a8e7cab81 261 SMART SM00382 30 220 1.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2114 5a89ca68b9fbe7628a5bdb5a8e7cab81 261 Pfam PF00005 ABC transporter 22 164 4.3E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0017 3ae605f47c8492f3c394c89b05870d4e 342 Gene3D G3DSA:3.40.630.10 12 339 5.8E-119 T 12-10-2018 TDE_0017 3ae605f47c8492f3c394c89b05870d4e 342 Gene3D G3DSA:2.40.30.40 75 169 5.8E-119 T 12-10-2018 IPR023367 Peptidase M42, domain 2 TDE_0017 3ae605f47c8492f3c394c89b05870d4e 342 SUPERFAMILY SSF101821 72 184 2.14E-29 T 12-10-2018 TDE_0017 3ae605f47c8492f3c394c89b05870d4e 342 Pfam PF05343 M42 glutamyl aminopeptidase 47 334 1.1E-70 T 12-10-2018 IPR008007 Peptidase M42 TDE_0017 3ae605f47c8492f3c394c89b05870d4e 342 PIRSF PIRSF001123 4 341 6.2E-35 T 12-10-2018 IPR008007 Peptidase M42 TDE_0017 3ae605f47c8492f3c394c89b05870d4e 342 SUPERFAMILY SSF53187 6 340 7.98E-47 T 12-10-2018 TDE_0648 32b9bd929d417ad80dc3a55306a7e5af 372 Pfam PF01339 CheB methylesterase 185 364 3.7E-58 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TDE_0648 32b9bd929d417ad80dc3a55306a7e5af 372 Pfam PF00072 Response regulator receiver domain 6 112 2.9E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0648 32b9bd929d417ad80dc3a55306a7e5af 372 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 369 37.305 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TDE_0648 32b9bd929d417ad80dc3a55306a7e5af 372 Gene3D G3DSA:3.40.50.180 175 370 7.5E-66 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal TDE_0648 32b9bd929d417ad80dc3a55306a7e5af 372 Gene3D G3DSA:3.40.50.2300 1 147 1.2E-30 T 12-10-2018 TDE_0648 32b9bd929d417ad80dc3a55306a7e5af 372 SUPERFAMILY SSF52738 180 368 6.8E-63 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal TDE_0648 32b9bd929d417ad80dc3a55306a7e5af 372 SUPERFAMILY SSF52172 1 111 1.57E-28 T 12-10-2018 IPR011006 CheY-like superfamily TDE_0648 32b9bd929d417ad80dc3a55306a7e5af 372 PIRSF PIRSF000876 1 372 4.5E-138 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TDE_0648 32b9bd929d417ad80dc3a55306a7e5af 372 SMART SM00448 4 121 2.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_1139 4b8136a7f22d2608e248c9aa626376b7 352 SUPERFAMILY SSF49899 7 135 6.11E-9 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily TDE_1139 4b8136a7f22d2608e248c9aa626376b7 352 Gene3D G3DSA:2.60.120.200 2 135 1.2E-8 T 12-10-2018 TDE_0819 f585a7436ab5081cde6754a46e1a5905 578 SUPERFAMILY SSF90123 5 315 1.44E-44 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0819 f585a7436ab5081cde6754a46e1a5905 578 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0819 f585a7436ab5081cde6754a46e1a5905 578 Gene3D G3DSA:1.20.1560.10 1 320 1.3E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0819 f585a7436ab5081cde6754a46e1a5905 578 SMART SM00382 360 562 3.7E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0819 f585a7436ab5081cde6754a46e1a5905 578 Gene3D G3DSA:3.40.50.300 322 574 1.3E-79 T 12-10-2018 TDE_0819 f585a7436ab5081cde6754a46e1a5905 578 Pfam PF00664 ABC transporter transmembrane region 19 290 4.8E-21 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0819 f585a7436ab5081cde6754a46e1a5905 578 SUPERFAMILY SSF52540 333 568 7.62E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0819 f585a7436ab5081cde6754a46e1a5905 578 Pfam PF00005 ABC transporter 351 499 2.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1494 083377d715d7ba92dc433398d6cf1a9f 146 SUPERFAMILY SSF52172 23 144 4.7E-34 T 12-10-2018 IPR011006 CheY-like superfamily TDE_1494 083377d715d7ba92dc433398d6cf1a9f 146 Gene3D G3DSA:3.40.50.2300 16 143 1.4E-36 T 12-10-2018 TDE_1494 083377d715d7ba92dc433398d6cf1a9f 146 SMART SM00448 25 139 6.6E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_1494 083377d715d7ba92dc433398d6cf1a9f 146 Pfam PF00072 Response regulator receiver domain 27 139 1.3E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_1820 aa28abbb47da61d04d9c8de8059d4fec 131 TIGRFAM TIGR04076 TIGR04076: TIGR04076 family protein 2 128 2.3E-30 T 12-10-2018 IPR023811 Conserved hypothetical protein CHP04076 TDE_0922 330dd284789cf922c171a47ca55fb051 597 Pfam PF00005 ABC transporter 354 501 1.5E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0922 330dd284789cf922c171a47ca55fb051 597 SMART SM00382 363 548 1.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0922 330dd284789cf922c171a47ca55fb051 597 Gene3D G3DSA:1.20.1560.10 4 319 6.4E-51 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0922 330dd284789cf922c171a47ca55fb051 597 Pfam PF00664 ABC transporter transmembrane region 21 288 3.7E-32 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0922 330dd284789cf922c171a47ca55fb051 597 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0922 330dd284789cf922c171a47ca55fb051 597 SUPERFAMILY SSF90123 13 316 4.05E-53 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0922 330dd284789cf922c171a47ca55fb051 597 Gene3D G3DSA:3.40.50.300 324 577 2.0E-75 T 12-10-2018 TDE_0922 330dd284789cf922c171a47ca55fb051 597 SUPERFAMILY SSF52540 335 572 4.22E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0428 593e09db6e67819179a072a1ea04a295 246 Gene3D G3DSA:1.25.40.10 1 48 5.5E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 SMART SM00028 26 59 0.067 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 SMART SM00028 1 25 170.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 SMART SM00028 161 194 1.9 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 SMART SM00028 94 127 0.0018 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 SMART SM00028 195 228 1.8E-8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 SMART SM00028 60 93 13.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 Pfam PF13181 Tetratricopeptide repeat 134 158 0.2 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 Pfam PF13181 Tetratricopeptide repeat 97 125 0.11 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 SUPERFAMILY SSF81901 2 229 1.96E-31 T 12-10-2018 TDE_0428 593e09db6e67819179a072a1ea04a295 246 Pfam PF07719 Tetratricopeptide repeat 28 59 2.7E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 TDE_0428 593e09db6e67819179a072a1ea04a295 246 Gene3D G3DSA:1.25.40.10 138 246 1.6E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 Gene3D G3DSA:1.25.40.10 49 127 4.7E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0428 593e09db6e67819179a072a1ea04a295 246 Pfam PF00515 Tetratricopeptide repeat 195 228 8.9E-10 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TDE_1152 e66e61c408ef91bd0de72ed786745c11 560 Pfam PF12236 Bacteriophage head to tail connecting protein 21 497 2.3E-147 T 12-10-2018 IPR020991 Head-to-tail connector protein, podovirus-type TDE_1591 e1c22219aaf5d12bdec22dee1ef2eeaf 284 Hamap MF_00361 NAD kinase [nadK]. 2 275 31.324 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TDE_1591 e1c22219aaf5d12bdec22dee1ef2eeaf 284 Gene3D G3DSA:2.60.200.30 115 252 5.9E-77 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TDE_1591 e1c22219aaf5d12bdec22dee1ef2eeaf 284 Gene3D G3DSA:3.40.50.10330 26 276 5.9E-77 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TDE_1591 e1c22219aaf5d12bdec22dee1ef2eeaf 284 Pfam PF01513 ATP-NAD kinase 46 257 1.8E-54 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TDE_1591 e1c22219aaf5d12bdec22dee1ef2eeaf 284 SUPERFAMILY SSF111331 3 276 5.63E-79 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TDE_2150 262cf5efd66f1531200b4d0e3935f4ff 340 SMART SM00028 84 117 14.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2150 262cf5efd66f1531200b4d0e3935f4ff 340 SMART SM00028 160 193 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2150 262cf5efd66f1531200b4d0e3935f4ff 340 Gene3D G3DSA:1.25.40.10 12 250 1.6E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2150 262cf5efd66f1531200b4d0e3935f4ff 340 SUPERFAMILY SSF48452 70 189 8.35E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0122 3fc968033efe1a8096d083d6f9f499bc 337 PIRSF PIRSF006621 1 335 4.8E-55 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TDE_0122 3fc968033efe1a8096d083d6f9f499bc 337 SUPERFAMILY SSF51395 1 329 2.2E-49 T 12-10-2018 TDE_0122 3fc968033efe1a8096d083d6f9f499bc 337 Gene3D G3DSA:3.20.20.70 1 254 2.3E-58 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0122 3fc968033efe1a8096d083d6f9f499bc 337 Pfam PF01207 Dihydrouridine synthase (Dus) 6 316 9.8E-45 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TDE_0776 34b98900919487514817065f6c362b89 90 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 82 7.0E-24 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0776 34b98900919487514817065f6c362b89 90 PRINTS PR00973 Ribosomal protein S17 family signature 73 80 2.2E-9 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0776 34b98900919487514817065f6c362b89 90 PRINTS PR00973 Ribosomal protein S17 family signature 31 54 2.2E-9 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0776 34b98900919487514817065f6c362b89 90 PRINTS PR00973 Ribosomal protein S17 family signature 63 73 2.2E-9 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0776 34b98900919487514817065f6c362b89 90 ProSitePatterns PS00056 Ribosomal protein S17 signature. 63 75 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0776 34b98900919487514817065f6c362b89 90 SUPERFAMILY SSF50249 12 89 6.85E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_0776 34b98900919487514817065f6c362b89 90 Pfam PF00366 Ribosomal protein S17 17 84 1.5E-28 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0776 34b98900919487514817065f6c362b89 90 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 12 82 1.4E-31 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0776 34b98900919487514817065f6c362b89 90 Gene3D G3DSA:2.40.50.140 11 90 4.7E-32 T 12-10-2018 TDE_0776 34b98900919487514817065f6c362b89 90 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 12 87 22.777 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2388 ab9a6960f416540395241c4b7642c547 200 Gene3D G3DSA:3.90.226.10 2 196 1.5E-63 T 12-10-2018 TDE_2388 ab9a6960f416540395241c4b7642c547 200 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 194 34.196 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_2388 ab9a6960f416540395241c4b7642c547 200 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 8.5E-28 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_2388 ab9a6960f416540395241c4b7642c547 200 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 8.5E-28 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_2388 ab9a6960f416540395241c4b7642c547 200 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 8.5E-28 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_2388 ab9a6960f416540395241c4b7642c547 200 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 8.5E-28 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TDE_2388 ab9a6960f416540395241c4b7642c547 200 Pfam PF00574 Clp protease 19 193 5.4E-66 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TDE_2388 ab9a6960f416540395241c4b7642c547 200 SUPERFAMILY SSF52096 22 196 1.9E-54 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_2388 ab9a6960f416540395241c4b7642c547 200 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 12-10-2018 IPR033135 ClpP, histidine active site TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 Gene3D G3DSA:3.40.50.720 1 200 8.2E-49 T 12-10-2018 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 SUPERFAMILY SSF51735 4 191 1.48E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 PIRSF PIRSF000114 1 357 1.2E-104 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 201 222 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 193 348 3.8E-41 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 Gene3D G3DSA:1.10.1040.10 202 357 3.6E-39 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 350 28.608 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 186 210 8.1E-31 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 216 240 8.1E-31 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 146 166 8.1E-31 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 8.1E-31 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 257 274 8.1E-31 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 8.1E-31 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 172 2.0E-42 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TDE_2090 0068a735b8d0b593e4f77c7aa1d474d3 357 SUPERFAMILY SSF48179 193 355 1.12E-36 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TDE_1686 23734aef16dd415102b65ebbf7a6eec4 449 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 16 440 1.4E-89 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TDE_1686 23734aef16dd415102b65ebbf7a6eec4 449 PIRSF PIRSF000505 1 449 1.6E-142 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TDE_1686 23734aef16dd415102b65ebbf7a6eec4 449 ProSitePatterns PS00885 EPSP synthase signature 2. 351 369 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TDE_1686 23734aef16dd415102b65ebbf7a6eec4 449 SUPERFAMILY SSF55205 16 447 2.62E-95 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TDE_1686 23734aef16dd415102b65ebbf7a6eec4 449 Gene3D G3DSA:3.65.10.10 22 250 2.6E-111 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TDE_1686 23734aef16dd415102b65ebbf7a6eec4 449 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 16 444 1.0E-103 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TDE_1686 23734aef16dd415102b65ebbf7a6eec4 449 Gene3D G3DSA:3.65.10.10 16 437 2.6E-111 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TDE_1686 23734aef16dd415102b65ebbf7a6eec4 449 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 446 28.525 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TDE_2369 ced989d66da38de838deba8dc559d6f1 365 SUPERFAMILY SSF52833 219 361 1.24E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily TDE_2369 ced989d66da38de838deba8dc559d6f1 365 ProSitePatterns PS00194 Thioredoxin family active site. 242 260 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TDE_2369 ced989d66da38de838deba8dc559d6f1 365 Pfam PF00578 AhpC/TSA family 220 336 2.8E-18 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TDE_2369 ced989d66da38de838deba8dc559d6f1 365 Gene3D G3DSA:3.40.30.10 203 363 8.1E-30 T 12-10-2018 TDE_2222 27f9b876eb40353836430c59bc42d297 294 SUPERFAMILY SSF69593 2 269 1.7E-41 T 12-10-2018 TDE_2222 27f9b876eb40353836430c59bc42d297 294 Gene3D G3DSA:3.40.1130.10 41 221 4.8E-11 T 12-10-2018 TDE_2222 27f9b876eb40353836430c59bc42d297 294 SMART SM00563 76 220 5.7E-6 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TDE_2222 27f9b876eb40353836430c59bc42d297 294 Pfam PF01553 Acyltransferase 66 197 3.2E-6 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TDE_2156 c30a02ab5054ee8ad34f77d56dcb9b90 175 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 174 5.8E-64 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TDE_2156 c30a02ab5054ee8ad34f77d56dcb9b90 175 SUPERFAMILY SSF54364 6 80 4.58E-29 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TDE_2156 c30a02ab5054ee8ad34f77d56dcb9b90 175 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 77 3.8E-30 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TDE_2156 c30a02ab5054ee8ad34f77d56dcb9b90 175 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 TDE_2156 c30a02ab5054ee8ad34f77d56dcb9b90 175 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 174 29.618 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TDE_2156 c30a02ab5054ee8ad34f77d56dcb9b90 175 SUPERFAMILY SSF55200 87 175 1.29E-28 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TDE_2156 c30a02ab5054ee8ad34f77d56dcb9b90 175 Gene3D G3DSA:3.30.110.10 78 175 4.8E-33 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TDE_2156 c30a02ab5054ee8ad34f77d56dcb9b90 175 Gene3D G3DSA:3.10.20.80 4 77 1.1E-31 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TDE_2156 c30a02ab5054ee8ad34f77d56dcb9b90 175 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 172 1.6E-33 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 TDE_2029 2cedf5caefbdd9a6bc362a95c725f87d 284 PIRSF PIRSF005902 32 284 6.7E-53 T 12-10-2018 IPR001130 TatD family GO:0016788 TDE_2029 2cedf5caefbdd9a6bc362a95c725f87d 284 Gene3D G3DSA:3.20.20.140 8 284 4.8E-53 T 12-10-2018 TDE_2029 2cedf5caefbdd9a6bc362a95c725f87d 284 SUPERFAMILY SSF51556 37 281 4.95E-48 T 12-10-2018 IPR032466 Metal-dependent hydrolase TDE_2029 2cedf5caefbdd9a6bc362a95c725f87d 284 Pfam PF01026 TatD related DNase 37 281 7.7E-42 T 12-10-2018 IPR001130 TatD family GO:0016788 TDE_2429 f875f4d6d48b4c8122bb6db7896df815 469 SUPERFAMILY SSF56954 41 467 6.93E-12 T 12-10-2018 TDE_2429 f875f4d6d48b4c8122bb6db7896df815 469 Pfam PF02321 Outer membrane efflux protein 341 466 1.9E-5 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TDE_0654 85a4411c106a2edb32192b7710c5725b 390 SUPERFAMILY SSF53187 3 387 3.29E-76 T 12-10-2018 TDE_0654 85a4411c106a2edb32192b7710c5725b 390 PIRSF PIRSF005962 1 390 1.0E-114 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 TDE_0654 85a4411c106a2edb32192b7710c5725b 390 SUPERFAMILY SSF55031 185 291 6.93E-30 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TDE_0654 85a4411c106a2edb32192b7710c5725b 390 Pfam PF01546 Peptidase family M20/M25/M40 72 385 2.6E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 TDE_0654 85a4411c106a2edb32192b7710c5725b 390 Gene3D G3DSA:3.40.630.10 14 371 1.5E-130 T 12-10-2018 TDE_0654 85a4411c106a2edb32192b7710c5725b 390 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 373 3.0E-102 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 TDE_0654 85a4411c106a2edb32192b7710c5725b 390 Gene3D G3DSA:3.30.70.360 182 296 1.5E-130 T 12-10-2018 TDE_0654 85a4411c106a2edb32192b7710c5725b 390 Pfam PF07687 Peptidase dimerisation domain 187 283 7.3E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain TDE_2735 0b3a51c16d4db51c3458d8a1c138f83f 460 Gene3D G3DSA:3.80.10.10 190 292 5.2E-12 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2735 0b3a51c16d4db51c3458d8a1c138f83f 460 Gene3D G3DSA:3.80.10.10 293 361 1.6E-8 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2735 0b3a51c16d4db51c3458d8a1c138f83f 460 Pfam PF13306 Leucine rich repeats (6 copies) 206 333 5.3E-13 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_2735 0b3a51c16d4db51c3458d8a1c138f83f 460 Gene3D G3DSA:3.80.10.10 362 447 2.2E-6 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1917 024430e868e40afbfb10bf1c4f4b2e5b 876 SUPERFAMILY SSF53448 9 217 3.92E-20 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1917 024430e868e40afbfb10bf1c4f4b2e5b 876 Gene3D G3DSA:3.90.550.10 8 221 1.2E-18 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1917 024430e868e40afbfb10bf1c4f4b2e5b 876 Gene3D G3DSA:3.40.50.2000 384 506 1.7E-6 T 12-10-2018 TDE_1917 024430e868e40afbfb10bf1c4f4b2e5b 876 Pfam PF02348 Cytidylyltransferase 9 214 1.0E-30 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 TDE_1917 024430e868e40afbfb10bf1c4f4b2e5b 876 Pfam PF13489 Methyltransferase domain 655 817 2.1E-15 T 12-10-2018 TDE_1917 024430e868e40afbfb10bf1c4f4b2e5b 876 Gene3D G3DSA:3.40.50.150 606 871 2.9E-26 T 12-10-2018 TDE_1917 024430e868e40afbfb10bf1c4f4b2e5b 876 SUPERFAMILY SSF53335 652 858 3.22E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0669 b653e2cfa84a00516deba362a4ac5562 292 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 291 3.5E-50 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_0669 b653e2cfa84a00516deba362a4ac5562 292 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 239 6.1E-73 T 12-10-2018 TDE_1901 97aa34bb3610ba249268219f6f1573db 282 SMART SM00382 28 207 3.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1901 97aa34bb3610ba249268219f6f1573db 282 Gene3D G3DSA:3.40.50.300 3 251 3.2E-46 T 12-10-2018 TDE_1901 97aa34bb3610ba249268219f6f1573db 282 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1901 97aa34bb3610ba249268219f6f1573db 282 SUPERFAMILY SSF52540 3 221 5.98E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1901 97aa34bb3610ba249268219f6f1573db 282 Pfam PF00005 ABC transporter 19 157 2.1E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1965 b0a3d923c7dc1c464e330e5845f937e5 418 Pfam PF00999 Sodium/hydrogen exchanger family 21 400 1.2E-54 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TDE_1965 b0a3d923c7dc1c464e330e5845f937e5 418 Gene3D G3DSA:1.20.1530.20 12 409 1.6E-84 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily TDE_0908 748f18ba20b808c252349d9aa23e8d58 583 SUPERFAMILY SSF90123 2 315 9.29E-44 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0908 748f18ba20b808c252349d9aa23e8d58 583 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0908 748f18ba20b808c252349d9aa23e8d58 583 SMART SM00382 371 557 1.6E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0908 748f18ba20b808c252349d9aa23e8d58 583 Pfam PF00664 ABC transporter transmembrane region 39 271 1.4E-20 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0908 748f18ba20b808c252349d9aa23e8d58 583 Gene3D G3DSA:3.40.50.300 322 583 2.6E-84 T 12-10-2018 TDE_0908 748f18ba20b808c252349d9aa23e8d58 583 Pfam PF00005 ABC transporter 362 510 4.8E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0908 748f18ba20b808c252349d9aa23e8d58 583 SUPERFAMILY SSF52540 325 579 2.88E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0908 748f18ba20b808c252349d9aa23e8d58 583 Gene3D G3DSA:1.20.1560.10 1 318 8.2E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1626 6181ff95af6168447a458e3204203271 122 Pfam PF01597 Glycine cleavage H-protein 8 121 2.7E-37 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate TDE_1626 6181ff95af6168447a458e3204203271 122 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 122 36.217 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TDE_1626 6181ff95af6168447a458e3204203271 122 Gene3D G3DSA:2.40.50.100 1 122 4.3E-43 T 12-10-2018 TDE_1626 6181ff95af6168447a458e3204203271 122 SUPERFAMILY SSF51230 4 121 6.96E-37 T 12-10-2018 IPR011053 Single hybrid motif TDE_1626 6181ff95af6168447a458e3204203271 122 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 120 7.7E-39 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TDE_1626 6181ff95af6168447a458e3204203271 122 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TDE_0682 ce8ab43b899207434b5878f88e20afee 137 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 18 98 1.1E-30 T 12-10-2018 IPR003849 Preprotein translocase YajC TDE_0682 ce8ab43b899207434b5878f88e20afee 137 PRINTS PR01853 Bacterial YajC preprotein translocase signature 18 38 6.0E-15 T 12-10-2018 IPR003849 Preprotein translocase YajC TDE_0682 ce8ab43b899207434b5878f88e20afee 137 PRINTS PR01853 Bacterial YajC preprotein translocase signature 56 74 6.0E-15 T 12-10-2018 IPR003849 Preprotein translocase YajC TDE_0682 ce8ab43b899207434b5878f88e20afee 137 Pfam PF02699 Preprotein translocase subunit 21 95 1.4E-29 T 12-10-2018 IPR003849 Preprotein translocase YajC TDE_0682 ce8ab43b899207434b5878f88e20afee 137 SMART SM01323 16 98 1.7E-41 T 12-10-2018 IPR003849 Preprotein translocase YajC TDE_0792 aaa30ccbb141281c6f8a5750c071f7c0 179 SUPERFAMILY SSF64263 1 119 7.98E-45 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0792 aaa30ccbb141281c6f8a5750c071f7c0 179 Gene3D G3DSA:3.90.1030.10 1 116 3.9E-44 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0792 aaa30ccbb141281c6f8a5750c071f7c0 179 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.193 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0792 aaa30ccbb141281c6f8a5750c071f7c0 179 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-33 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0792 aaa30ccbb141281c6f8a5750c071f7c0 179 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.2E-45 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2176 8ceebb5c79f9abb8f1874073953ec2fa 612 Gene3D G3DSA:3.40.50.1390 3 121 9.1E-27 T 12-10-2018 TDE_2176 8ceebb5c79f9abb8f1874073953ec2fa 612 SUPERFAMILY SSF53041 9 159 1.96E-25 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 TDE_2176 8ceebb5c79f9abb8f1874073953ec2fa 612 Pfam PF07508 Recombinase 184 306 1.7E-22 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 TDE_2176 8ceebb5c79f9abb8f1874073953ec2fa 612 Gene3D G3DSA:1.10.10.2600 144 309 2.7E-13 T 12-10-2018 IPR038109 DNA-binding recombinase domain superfamily TDE_2176 8ceebb5c79f9abb8f1874073953ec2fa 612 SMART SM00857 9 160 5.4E-32 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 TDE_2176 8ceebb5c79f9abb8f1874073953ec2fa 612 Pfam PF14287 Domain of unknown function (DUF4368) 477 543 3.3E-21 T 12-10-2018 IPR025378 Domain of unknown function DUF4368 TDE_2176 8ceebb5c79f9abb8f1874073953ec2fa 612 Pfam PF00239 Resolvase, N terminal domain 10 159 4.8E-21 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 TDE_2176 8ceebb5c79f9abb8f1874073953ec2fa 612 Pfam PF13408 Recombinase zinc beta ribbon domain 322 384 7.4E-11 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain TDE_0104 8f439e6c7a95e4364feada6659cf3653 343 PIRSF PIRSF001455 1 343 4.7E-112 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TDE_0104 8f439e6c7a95e4364feada6659cf3653 343 Gene3D G3DSA:1.20.1090.10 162 343 3.0E-46 T 12-10-2018 TDE_0104 8f439e6c7a95e4364feada6659cf3653 343 SUPERFAMILY SSF56796 20 337 1.2E-72 T 12-10-2018 TDE_0104 8f439e6c7a95e4364feada6659cf3653 343 Gene3D G3DSA:3.40.50.1970 27 161 8.0E-41 T 12-10-2018 TDE_0104 8f439e6c7a95e4364feada6659cf3653 343 Pfam PF01761 3-dehydroquinate synthase 56 313 4.7E-78 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TDE_1126 1d0de215498309c70c7fa7892eb471ee 246 Pfam PF13181 Tetratricopeptide repeat 99 127 0.001 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1126 1d0de215498309c70c7fa7892eb471ee 246 Gene3D G3DSA:1.25.40.10 28 92 1.2E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1126 1d0de215498309c70c7fa7892eb471ee 246 SMART SM00028 97 130 0.05 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1126 1d0de215498309c70c7fa7892eb471ee 246 SMART SM00028 62 95 14.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1126 1d0de215498309c70c7fa7892eb471ee 246 SMART SM00028 28 61 170.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1126 1d0de215498309c70c7fa7892eb471ee 246 SMART SM00028 131 164 0.32 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1126 1d0de215498309c70c7fa7892eb471ee 246 Gene3D G3DSA:1.25.40.10 93 231 2.1E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1126 1d0de215498309c70c7fa7892eb471ee 246 SUPERFAMILY SSF48452 28 168 7.05E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0209 b87c960b6d33c7c5df8809c6f2bb494d 428 PRINTS PR00758 Arsenical pump membrane protein signature 279 303 5.5E-10 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 TDE_0209 b87c960b6d33c7c5df8809c6f2bb494d 428 PRINTS PR00758 Arsenical pump membrane protein signature 365 390 5.5E-10 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 TDE_0209 b87c960b6d33c7c5df8809c6f2bb494d 428 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 5.5E-10 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 TDE_0209 b87c960b6d33c7c5df8809c6f2bb494d 428 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 5.5E-10 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 TDE_0209 b87c960b6d33c7c5df8809c6f2bb494d 428 Pfam PF03600 Citrate transporter 17 354 3.7E-33 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 TDE_1365 68104f604a575029fc14c85812c1b0c4 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 7.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1365 68104f604a575029fc14c85812c1b0c4 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 7.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1365 68104f604a575029fc14c85812c1b0c4 192 SUPERFAMILY SSF46689 3 74 7.18E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_1365 68104f604a575029fc14c85812c1b0c4 192 Gene3D G3DSA:1.10.357.10 1 177 1.0E-21 T 12-10-2018 TDE_1365 68104f604a575029fc14c85812c1b0c4 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.0E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 Gene3D G3DSA:1.10.150.570 578 628 2.6E-22 T 12-10-2018 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 SMART SM01228 555 626 1.6E-37 T 12-10-2018 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 376 399 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.9E-6 T 12-10-2018 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 1.9E-6 T 12-10-2018 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 SUPERFAMILY SSF51905 6 269 5.68E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 Gene3D G3DSA:3.50.50.60 328 473 1.3E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 Gene3D G3DSA:3.50.50.60 1 236 2.5E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 9.9E-5 T 12-10-2018 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.9E-5 T 12-10-2018 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 626 4.5E-236 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 281 295 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 628 38.353 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 Pfam PF13932 GidA associated domain 416 624 1.2E-70 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 TDE_0828 ff240c7016addaadc7541fbdf5ee3f0a 628 Pfam PF01134 Glucose inhibited division protein A 8 404 4.2E-149 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 TDE_0250 d585f0aed0ee63ee1e4c837889e639bb 441 Pfam PF00209 Sodium:neurotransmitter symporter family 8 129 6.8E-19 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TDE_0250 d585f0aed0ee63ee1e4c837889e639bb 441 Pfam PF00209 Sodium:neurotransmitter symporter family 150 422 2.3E-24 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TDE_0250 d585f0aed0ee63ee1e4c837889e639bb 441 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 4.2E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TDE_0250 d585f0aed0ee63ee1e4c837889e639bb 441 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 302 321 4.2E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TDE_0250 d585f0aed0ee63ee1e4c837889e639bb 441 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 4.2E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TDE_0250 d585f0aed0ee63ee1e4c837889e639bb 441 SUPERFAMILY SSF161070 8 437 2.88E-122 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 TDE_1601 5330944d426f274ab113e953fbe32376 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1601 5330944d426f274ab113e953fbe32376 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1601 5330944d426f274ab113e953fbe32376 215 SUPERFAMILY SSF46689 6 72 4.61E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_1601 5330944d426f274ab113e953fbe32376 215 Gene3D G3DSA:1.10.357.10 5 201 8.7E-24 T 12-10-2018 TDE_1601 5330944d426f274ab113e953fbe32376 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 6.1E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1094 47da1560cea57487f7c508484b63d173 525 Gene3D G3DSA:3.20.110.10 4 402 1.6E-104 T 12-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily TDE_1094 47da1560cea57487f7c508484b63d173 525 Pfam PF09210 Domain of unknown function (DUF1957) 422 521 1.2E-28 T 12-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TDE_1094 47da1560cea57487f7c508484b63d173 525 Pfam PF03065 Glycosyl hydrolase family 57 7 239 1.5E-22 T 12-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 TDE_1094 47da1560cea57487f7c508484b63d173 525 Gene3D G3DSA:1.20.1430.10 414 525 1.2E-30 T 12-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TDE_1094 47da1560cea57487f7c508484b63d173 525 SUPERFAMILY SSF88688 414 523 1.96E-32 T 12-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily TDE_1094 47da1560cea57487f7c508484b63d173 525 SUPERFAMILY SSF88713 5 402 1.05E-90 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TDE_1045 90e3d0bf767a12168e824f2943f8bf2e 139 PIRSF PIRSF016789 4 126 1.9E-31 T 12-10-2018 IPR007401 Protein of unknown function DUF454 TDE_1045 90e3d0bf767a12168e824f2943f8bf2e 139 Pfam PF04304 Protein of unknown function (DUF454) 6 120 3.2E-37 T 12-10-2018 IPR007401 Protein of unknown function DUF454 TDE_1730 13aa86b078505a4255fc33464dd2e8d8 600 SUPERFAMILY SSF49303 193 285 3.45E-10 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TDE_1730 13aa86b078505a4255fc33464dd2e8d8 600 SUPERFAMILY SSF51445 281 572 7.09E-53 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_1730 13aa86b078505a4255fc33464dd2e8d8 600 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 297 481 2.8E-5 T 12-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TDE_1730 13aa86b078505a4255fc33464dd2e8d8 600 Gene3D G3DSA:3.20.20.80 294 579 7.2E-49 T 12-10-2018 TDE_1730 13aa86b078505a4255fc33464dd2e8d8 600 Gene3D G3DSA:2.60.120.260 30 190 2.0E-35 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily TDE_1730 13aa86b078505a4255fc33464dd2e8d8 600 SUPERFAMILY SSF49785 23 190 1.26E-43 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily TDE_1730 13aa86b078505a4255fc33464dd2e8d8 600 Gene3D G3DSA:2.60.40.10 191 285 2.5E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_1730 13aa86b078505a4255fc33464dd2e8d8 600 Pfam PF00703 Glycosyl hydrolases family 2 192 284 1.2E-8 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TDE_1730 13aa86b078505a4255fc33464dd2e8d8 600 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 79 185 2.0E-14 T 12-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TDE_0574 19315f718d90dadf43adb940634dd354 285 Gene3D G3DSA:3.80.10.10 119 258 1.0E-27 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0574 19315f718d90dadf43adb940634dd354 285 Gene3D G3DSA:3.80.10.10 6 118 4.9E-31 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0574 19315f718d90dadf43adb940634dd354 285 Pfam PF13306 Leucine rich repeats (6 copies) 128 248 5.6E-22 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_0574 19315f718d90dadf43adb940634dd354 285 Pfam PF13306 Leucine rich repeats (6 copies) 13 114 8.7E-27 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_0574 19315f718d90dadf43adb940634dd354 285 SUPERFAMILY SSF52058 19 227 1.04E-23 T 12-10-2018 TDE_1454 eb751ec99614ce86041abbe3f0daa293 454 Pfam PF13347 MFS/sugar transport protein 8 434 6.5E-85 T 12-10-2018 TDE_1454 eb751ec99614ce86041abbe3f0daa293 454 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 7 447 2.3E-117 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 TDE_1454 eb751ec99614ce86041abbe3f0daa293 454 Gene3D G3DSA:1.20.1250.20 2 432 3.0E-16 T 12-10-2018 TDE_1454 eb751ec99614ce86041abbe3f0daa293 454 SUPERFAMILY SSF103473 5 435 2.62E-26 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_0686 9ac249e7eca99c544b93dc85a387c661 316 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 15 292 22.342 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_0686 9ac249e7eca99c544b93dc85a387c661 316 ProSitePatterns PS01058 SAICAR synthetase signature 2. 200 208 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_0686 9ac249e7eca99c544b93dc85a387c661 316 Gene3D G3DSA:3.30.470.20 97 243 2.8E-50 T 12-10-2018 TDE_0686 9ac249e7eca99c544b93dc85a387c661 316 Gene3D G3DSA:3.30.200.20 7 96 9.4E-27 T 12-10-2018 TDE_0686 9ac249e7eca99c544b93dc85a387c661 316 Pfam PF01259 SAICAR synthetase 19 259 8.1E-77 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TDE_0686 9ac249e7eca99c544b93dc85a387c661 316 SUPERFAMILY SSF56104 14 295 7.52E-84 T 12-10-2018 TDE_1933 391637afab4c79db013abc64589e2d84 1003 SUPERFAMILY SSF51126 482 689 1.14E-6 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_1933 391637afab4c79db013abc64589e2d84 1003 Gene3D G3DSA:2.160.20.20 437 722 2.0E-6 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TDE_1933 391637afab4c79db013abc64589e2d84 1003 Gene3D G3DSA:2.160.20.20 779 1000 1.2E-7 T 12-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TDE_1933 391637afab4c79db013abc64589e2d84 1003 SMART SM00710 856 881 510.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1933 391637afab4c79db013abc64589e2d84 1003 SMART SM00710 919 951 2400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1933 391637afab4c79db013abc64589e2d84 1003 SMART SM00710 583 604 1100.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1933 391637afab4c79db013abc64589e2d84 1003 SMART SM00710 610 630 2300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1933 391637afab4c79db013abc64589e2d84 1003 SMART SM00710 547 576 8800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1933 391637afab4c79db013abc64589e2d84 1003 SUPERFAMILY SSF51126 765 963 2.98E-7 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_1895 ee310496bb0b1e3450726bea715c143c 294 SUPERFAMILY SSF54814 178 294 3.14E-30 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TDE_1895 ee310496bb0b1e3450726bea715c143c 294 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.5E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_1895 ee310496bb0b1e3450726bea715c143c 294 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 277 1.1E-67 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1895 ee310496bb0b1e3450726bea715c143c 294 Pfam PF07650 KH domain 205 283 1.4E-11 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_1895 ee310496bb0b1e3450726bea715c143c 294 Gene3D G3DSA:3.30.300.20 183 294 1.1E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_1895 ee310496bb0b1e3450726bea715c143c 294 Hamap MF_00367 GTPase Era [era]. 1 294 30.889 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1895 ee310496bb0b1e3450726bea715c143c 294 Gene3D G3DSA:3.40.50.300 1 182 2.3E-41 T 12-10-2018 TDE_1895 ee310496bb0b1e3450726bea715c143c 294 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 162 3.5E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_1895 ee310496bb0b1e3450726bea715c143c 294 SUPERFAMILY SSF52540 6 209 3.92E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1242 d8edbcad4e7a8f680dbb2df8e607ba8c 155 Gene3D G3DSA:3.40.390.30 5 150 3.6E-39 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 TDE_1242 d8edbcad4e7a8f680dbb2df8e607ba8c 155 SUPERFAMILY SSF55486 5 148 3.17E-37 T 12-10-2018 TDE_1242 d8edbcad4e7a8f680dbb2df8e607ba8c 155 Pfam PF02130 Uncharacterized protein family UPF0054 23 146 9.4E-32 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TDE_1242 d8edbcad4e7a8f680dbb2df8e607ba8c 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 152 20.716 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TDE_1242 d8edbcad4e7a8f680dbb2df8e607ba8c 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 147 4.0E-38 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TDE_1242 d8edbcad4e7a8f680dbb2df8e607ba8c 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 117 127 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site TDE_0434 23b670bbb2ef2b4d6a0fc6c8b8cc4812 191 Gene3D G3DSA:2.20.28.10 147 191 6.0E-16 T 12-10-2018 TDE_0434 23b670bbb2ef2b4d6a0fc6c8b8cc4812 191 SUPERFAMILY SSF57802 151 189 1.46E-10 T 12-10-2018 TDE_0434 23b670bbb2ef2b4d6a0fc6c8b8cc4812 191 Pfam PF02915 Rubrerythrin 12 138 6.9E-28 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 TDE_0434 23b670bbb2ef2b4d6a0fc6c8b8cc4812 191 SUPERFAMILY SSF47240 4 146 6.21E-40 T 12-10-2018 IPR009078 Ferritin-like superfamily TDE_0434 23b670bbb2ef2b4d6a0fc6c8b8cc4812 191 Gene3D G3DSA:1.20.1260.10 1 146 3.5E-57 T 12-10-2018 IPR012347 Ferritin-like TDE_2661 73aa2612db7b26caffa1f36f57bd551d 82 SMART SM00834 1 41 1.5E-21 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TDE_2661 73aa2612db7b26caffa1f36f57bd551d 82 Pfam PF09723 Zinc ribbon domain 1 40 1.8E-19 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TDE_2661 73aa2612db7b26caffa1f36f57bd551d 82 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 7.0E-22 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TDE_0738 f5765639b08324a86003dbc8f53aeb7e 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 82 6.0E-24 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_0738 f5765639b08324a86003dbc8f53aeb7e 86 Pfam PF04221 RelB antitoxin 1 55 1.3E-9 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_1116 74b9798fcbdbb937b88756aa60e08139 102 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 41 95 3.8E-9 T 12-10-2018 IPR009387 Toxin HigB-2 TDE_1116 74b9798fcbdbb937b88756aa60e08139 102 PIRSF PIRSF039032 1 102 1.4E-39 T 12-10-2018 IPR009387 Toxin HigB-2 TDE_0082 81ddb41d3891c985cae76033f51b139e 105 Gene3D G3DSA:1.10.1660.10 2 75 1.1E-17 T 12-10-2018 TDE_0082 81ddb41d3891c985cae76033f51b139e 105 Pfam PF13411 MerR HTH family regulatory protein 4 68 4.5E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TDE_0082 81ddb41d3891c985cae76033f51b139e 105 SUPERFAMILY SSF46955 4 95 5.04E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily TDE_0990 2201fef56b0a812e742b159c0138acf3 116 SUPERFAMILY SSF47598 66 110 1.5E-8 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TDE_0990 2201fef56b0a812e742b159c0138acf3 116 Pfam PF05534 HicB family 56 102 2.2E-11 T 12-10-2018 IPR008651 Uncharacterised protein family HicB TDE_0990 2201fef56b0a812e742b159c0138acf3 116 SUPERFAMILY SSF143100 3 67 6.67E-18 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like TDE_0990 2201fef56b0a812e742b159c0138acf3 116 Gene3D G3DSA:3.30.160.250 3 91 2.5E-14 T 12-10-2018 TDE_0012 331a24fc6139b900701f758148278f08 484 Pfam PF02554 Carbon starvation protein CstA 157 282 2.8E-19 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 TDE_0012 331a24fc6139b900701f758148278f08 484 Pfam PF02554 Carbon starvation protein CstA 4 143 2.7E-26 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 TDE_0012 331a24fc6139b900701f758148278f08 484 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 323 431 1.5E-23 T 12-10-2018 IPR025299 CstA, C-terminal domain TDE_2496 b011e033f27b0e2224ebda9832876171 242 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 65 214 2.4E-23 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2496 b011e033f27b0e2224ebda9832876171 242 SUPERFAMILY SSF58104 3 240 8.89E-40 T 12-10-2018 TDE_2496 b011e033f27b0e2224ebda9832876171 242 SMART SM00283 3 236 3.0E-4 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2496 b011e033f27b0e2224ebda9832876171 242 Gene3D G3DSA:1.10.287.950 1 242 5.2E-33 T 12-10-2018 TDE_2101 e3d894dcb583a766ff0782c0a5470025 356 Gene3D G3DSA:3.90.1580.10 80 356 2.9E-74 T 12-10-2018 TDE_2101 e3d894dcb583a766ff0782c0a5470025 356 SUPERFAMILY SSF56436 87 354 3.06E-48 T 12-10-2018 IPR016187 C-type lectin fold TDE_2101 e3d894dcb583a766ff0782c0a5470025 356 Pfam PF03781 Sulfatase-modifying factor enzyme 1 90 353 3.3E-41 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 176 5.9E-18 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 SUPERFAMILY SSF54980 594 684 6.71E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Gene3D G3DSA:3.40.50.300 3 280 7.5E-74 T 12-10-2018 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Pfam PF14492 Elongation Factor G, domain II 396 467 6.3E-21 T 12-10-2018 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 SUPERFAMILY SSF50447 258 389 1.49E-24 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 SUPERFAMILY SSF54980 396 472 8.63E-14 T 12-10-2018 IPR035647 EF-G domain III/V-like TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 SUPERFAMILY SSF52540 5 275 2.16E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Pfam PF00009 Elongation factor Tu GTP binding domain 7 275 2.3E-41 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 SMART SM00838 591 679 7.3E-27 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Pfam PF00679 Elongation factor G C-terminus 591 678 4.5E-27 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 SMART SM00889 471 589 2.3E-65 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Gene3D G3DSA:3.30.70.240 595 666 2.0E-84 T 12-10-2018 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Gene3D G3DSA:3.30.230.10 475 679 2.0E-84 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Gene3D G3DSA:2.40.30.10 281 401 4.0E-34 T 12-10-2018 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Gene3D G3DSA:3.30.70.870 402 474 1.6E-16 T 12-10-2018 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Pfam PF03144 Elongation factor Tu domain 2 315 381 1.7E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 SUPERFAMILY SSF54211 470 590 3.03E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_0947 691e83fe90f03238293c08ecfd2cfd42 692 Pfam PF03764 Elongation factor G, domain IV 470 588 5.6E-43 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 Gene3D G3DSA:3.30.420.40 197 397 4.9E-89 T 12-10-2018 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 Gene3D G3DSA:3.30.420.40 1 196 6.5E-80 T 12-10-2018 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 TIGRFAM TIGR00016 ackA: acetate kinase 1 396 1.7E-168 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 198.113 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 SUPERFAMILY SSF53067 1 195 2.98E-72 T 12-10-2018 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 PRINTS PR00471 Acetate kinase family signature 204 225 1.2E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 PRINTS PR00471 Acetate kinase family signature 3 14 1.2E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 PRINTS PR00471 Acetate kinase family signature 323 339 1.2E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 PRINTS PR00471 Acetate kinase family signature 174 187 1.2E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 PRINTS PR00471 Acetate kinase family signature 377 389 1.2E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 PRINTS PR00471 Acetate kinase family signature 301 314 1.2E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 Pfam PF00871 Acetokinase family 2 390 5.3E-167 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 SUPERFAMILY SSF53067 159 396 2.7E-94 T 12-10-2018 TDE_0933 ac589c6f8b3233a10b9b2d5af34ed373 397 PIRSF PIRSF000722 1 397 4.2E-164 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TDE_0183 d4c9c3a8165525b72f21179121f683ba 602 Gene3D G3DSA:1.10.3720.10 24 304 1.3E-41 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0183 d4c9c3a8165525b72f21179121f683ba 602 SUPERFAMILY SSF161098 323 595 4.36E-34 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0183 d4c9c3a8165525b72f21179121f683ba 602 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 290 7.5E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0183 d4c9c3a8165525b72f21179121f683ba 602 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 417 585 1.6E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0183 d4c9c3a8165525b72f21179121f683ba 602 SUPERFAMILY SSF161098 22 299 1.03E-40 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0183 d4c9c3a8165525b72f21179121f683ba 602 Gene3D G3DSA:1.10.3720.10 314 589 3.2E-28 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0773 16d4affacc5209a56077176ac3d4b177 239 Pfam PF07650 KH domain 40 112 1.6E-15 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0773 16d4affacc5209a56077176ac3d4b177 239 SUPERFAMILY SSF54821 110 206 1.22E-33 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0773 16d4affacc5209a56077176ac3d4b177 239 SUPERFAMILY SSF54814 2 108 9.94E-34 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TDE_0773 16d4affacc5209a56077176ac3d4b177 239 Pfam PF00189 Ribosomal protein S3, C-terminal domain 122 204 4.1E-36 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0773 16d4affacc5209a56077176ac3d4b177 239 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 213 36.466 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TDE_0773 16d4affacc5209a56077176ac3d4b177 239 Gene3D G3DSA:3.30.1140.32 110 210 4.5E-37 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0773 16d4affacc5209a56077176ac3d4b177 239 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 211 1.9E-90 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TDE_0773 16d4affacc5209a56077176ac3d4b177 239 Gene3D G3DSA:3.30.300.20 17 109 1.4E-28 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_0773 16d4affacc5209a56077176ac3d4b177 239 SMART SM00322 62 127 0.0018 T 12-10-2018 IPR004087 K Homology domain GO:0003676 TDE_0773 16d4affacc5209a56077176ac3d4b177 239 ProSitePatterns PS00548 Ribosomal protein S3 signature. 165 199 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_1170 b9e6c04f1ac9e271ca054fce462a0588 120 Pfam PF01381 Helix-turn-helix 7 62 5.9E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1170 b9e6c04f1ac9e271ca054fce462a0588 120 SMART SM00530 6 62 2.6E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1170 b9e6c04f1ac9e271ca054fce462a0588 120 SUPERFAMILY SSF47413 3 65 1.38E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_1170 b9e6c04f1ac9e271ca054fce462a0588 120 Gene3D G3DSA:1.10.260.40 3 114 4.3E-10 T 12-10-2018 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 SMART SM00994 9 49 2.5E-11 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 SUPERFAMILY SSF57716 10 46 9.27E-6 T 12-10-2018 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 312 384 2.3E-15 T 12-10-2018 IPR019489 Clp ATPase, C-terminal TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 410 48.777 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 403 7.2E-184 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 Gene3D G3DSA:3.30.50.30 2 48 2.0E-10 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 SMART SM01086 312 407 4.8E-29 T 12-10-2018 IPR019489 Clp ATPase, C-terminal TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 Gene3D G3DSA:3.40.50.300 56 310 2.6E-106 T 12-10-2018 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 Pfam PF06689 ClpX C4-type zinc finger 11 47 1.4E-12 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 SUPERFAMILY SSF52540 59 392 1.14E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 Gene3D G3DSA:1.10.8.60 311 414 4.1E-35 T 12-10-2018 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 305 5.8E-48 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 SMART SM00382 108 270 6.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 179 197 9.2E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_1673 e3beaf1783bac7cabfdf6049b5266902 415 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 112 130 9.2E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_1292 dd896a22715c4963d7da9b8053e8e3f6 435 SUPERFAMILY SSF111283 8 435 1.57E-74 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TDE_1292 dd896a22715c4963d7da9b8053e8e3f6 435 Gene3D G3DSA:3.30.2290.10 5 207 9.6E-17 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal TDE_1292 dd896a22715c4963d7da9b8053e8e3f6 435 Pfam PF01523 Putative modulator of DNA gyrase 27 314 2.1E-31 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TDE_1311 f2df38cea50a709f411d6ec58163dfa5 534 SUPERFAMILY SSF52540 322 514 2.78E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1311 f2df38cea50a709f411d6ec58163dfa5 534 SUPERFAMILY SSF90123 4 291 5.49E-32 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1311 f2df38cea50a709f411d6ec58163dfa5 534 Gene3D G3DSA:3.40.50.300 316 522 2.0E-44 T 12-10-2018 TDE_1311 f2df38cea50a709f411d6ec58163dfa5 534 Pfam PF00664 ABC transporter transmembrane region 14 276 2.8E-12 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_1311 f2df38cea50a709f411d6ec58163dfa5 534 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1311 f2df38cea50a709f411d6ec58163dfa5 534 Pfam PF00005 ABC transporter 344 483 8.6E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1311 f2df38cea50a709f411d6ec58163dfa5 534 SMART SM00382 350 532 6.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1311 f2df38cea50a709f411d6ec58163dfa5 534 Gene3D G3DSA:1.20.1560.10 2 303 3.2E-21 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0329 010ff37baa120d9a013308f553de5524 101 Pfam PF09827 CRISPR associated protein Cas2 1 80 2.3E-16 T 12-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 TDE_0329 010ff37baa120d9a013308f553de5524 101 SUPERFAMILY SSF143430 1 83 4.71E-13 T 12-10-2018 TDE_0329 010ff37baa120d9a013308f553de5524 101 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 99 12.109 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TDE_0329 010ff37baa120d9a013308f553de5524 101 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 94 1.7E-21 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 TDE_0302 38645e1d04d0c98a3ef6e55572b321cc 92 Pfam PF04221 RelB antitoxin 3 73 1.3E-14 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_0302 38645e1d04d0c98a3ef6e55572b321cc 92 Gene3D G3DSA:1.10.1220.10 1 51 3.7E-10 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TDE_0302 38645e1d04d0c98a3ef6e55572b321cc 92 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 90 1.3E-28 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_0302 38645e1d04d0c98a3ef6e55572b321cc 92 PIRSF PIRSF003108 1 92 6.9E-14 T 12-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 TDE_0966 b10d3f905215bcc4eee9d8ec4b664cca 273 Gene3D G3DSA:3.20.20.140 1 269 3.6E-39 T 12-10-2018 TDE_0966 b10d3f905215bcc4eee9d8ec4b664cca 273 SUPERFAMILY SSF51556 1 268 3.06E-37 T 12-10-2018 IPR032466 Metal-dependent hydrolase TDE_0966 b10d3f905215bcc4eee9d8ec4b664cca 273 PIRSF PIRSF005902 1 270 3.1E-39 T 12-10-2018 IPR001130 TatD family GO:0016788 TDE_0966 b10d3f905215bcc4eee9d8ec4b664cca 273 Pfam PF01026 TatD related DNase 3 266 1.1E-39 T 12-10-2018 IPR001130 TatD family GO:0016788 TDE_0767 1198a2ba681677e4df895f53692e368c 208 SUPERFAMILY SSF50447 1 206 6.8E-70 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_0767 1198a2ba681677e4df895f53692e368c 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 204 34.718 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0767 1198a2ba681677e4df895f53692e368c 208 Pfam PF00297 Ribosomal protein L3 96 178 1.6E-14 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0767 1198a2ba681677e4df895f53692e368c 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 201 2.3E-77 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0767 1198a2ba681677e4df895f53692e368c 208 Gene3D G3DSA:2.40.50.620 32 93 2.2E-8 T 12-10-2018 TDE_0767 1198a2ba681677e4df895f53692e368c 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 99 122 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site TDE_0767 1198a2ba681677e4df895f53692e368c 208 Gene3D G3DSA:2.40.30.10 129 207 2.7E-15 T 12-10-2018 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 Gene3D G3DSA:2.30.30.30 127 184 1.0E-19 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 185 20.109 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 Gene3D G3DSA:3.30.70.940 1 124 7.5E-33 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 Pfam PF00467 KOW motif 135 162 8.1E-6 T 12-10-2018 IPR005824 KOW TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 Pfam PF02357 Transcription termination factor nusG 3 114 2.5E-20 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 SUPERFAMILY SSF50104 131 183 9.03E-15 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 SMART SM00739 131 158 0.0011 T 12-10-2018 IPR005824 KOW TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 183 1.3E-53 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 SMART SM00738 2 117 3.8E-30 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 SUPERFAMILY SSF82679 3 118 1.26E-24 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 8.2E-17 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 8.2E-17 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TDE_2426 e608fb89318b92031cad73fccb5cc7aa 185 PRINTS PR00338 Transcription termination factor NUSG signature 58 70 8.2E-17 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TDE_2166 4ab7c663dd47625b8e47f0cdd032994b 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 18.684 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 TDE_2166 4ab7c663dd47625b8e47f0cdd032994b 113 Gene3D G3DSA:3.30.2320.80 1 112 1.0E-27 T 12-10-2018 TDE_2166 4ab7c663dd47625b8e47f0cdd032994b 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 110 2.0E-27 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 TDE_2166 4ab7c663dd47625b8e47f0cdd032994b 113 PIRSF PIRSF004761 1 113 1.7E-25 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 SUPERFAMILY SSF117892 49 182 4.05E-40 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 Gene3D G3DSA:3.30.479.30 45 177 5.3E-41 T 12-10-2018 TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 Pfam PF01145 SPFH domain / Band 7 family 21 190 2.0E-29 T 12-10-2018 IPR001107 Band 7 domain TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 SMART SM00244 17 175 7.6E-58 T 12-10-2018 IPR001107 Band 7 domain TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 Pfam PF16200 C-terminal region of band_7 240 289 4.5E-11 T 12-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 PRINTS PR00721 Stomatin signature 151 169 2.9E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 PRINTS PR00721 Stomatin signature 170 191 2.9E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 PRINTS PR00721 Stomatin signature 127 150 2.9E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 PRINTS PR00721 Stomatin signature 24 46 2.9E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 PRINTS PR00721 Stomatin signature 72 93 2.9E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0705 bfd3e5b768bfa5c1d9944a7b6a1106c8 309 PRINTS PR00721 Stomatin signature 107 124 2.9E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0245 9fb47c57b98ceef038e9530770a9839b 572 Pfam PF00005 ABC transporter 344 492 7.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0245 9fb47c57b98ceef038e9530770a9839b 572 Gene3D G3DSA:1.20.1560.10 5 297 1.3E-42 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0245 9fb47c57b98ceef038e9530770a9839b 572 Pfam PF00664 ABC transporter transmembrane region 16 285 1.1E-23 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0245 9fb47c57b98ceef038e9530770a9839b 572 SUPERFAMILY SSF52540 323 563 2.78E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0245 9fb47c57b98ceef038e9530770a9839b 572 SMART SM00382 353 539 7.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0245 9fb47c57b98ceef038e9530770a9839b 572 Gene3D G3DSA:3.40.50.300 319 570 1.1E-83 T 12-10-2018 TDE_0245 9fb47c57b98ceef038e9530770a9839b 572 SUPERFAMILY SSF90123 12 474 6.28E-49 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0245 9fb47c57b98ceef038e9530770a9839b 572 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0920 b4e3d18c06f1fa399320a491176cb69b 313 Gene3D G3DSA:1.10.10.60 262 313 4.4E-16 T 12-10-2018 TDE_0920 b4e3d18c06f1fa399320a491176cb69b 313 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 265 307 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TDE_0920 b4e3d18c06f1fa399320a491176cb69b 313 Gene3D G3DSA:1.10.10.60 204 261 2.7E-12 T 12-10-2018 TDE_0920 b4e3d18c06f1fa399320a491176cb69b 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 295 5.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TDE_0920 b4e3d18c06f1fa399320a491176cb69b 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 311 5.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TDE_0920 b4e3d18c06f1fa399320a491176cb69b 313 SUPERFAMILY SSF46689 265 313 3.05E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_0920 b4e3d18c06f1fa399320a491176cb69b 313 Pfam PF12833 Helix-turn-helix domain 234 313 1.9E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TDE_0920 b4e3d18c06f1fa399320a491176cb69b 313 SMART SM00342 228 311 3.4E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TDE_0920 b4e3d18c06f1fa399320a491176cb69b 313 SUPERFAMILY SSF46689 212 262 1.7E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_0687 0b14426ba0b01ffaea98435cc2486729 159 Pfam PF00731 AIR carboxylase 5 148 1.9E-36 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TDE_0687 0b14426ba0b01ffaea98435cc2486729 159 SMART SM01001 3 150 7.6E-42 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TDE_0687 0b14426ba0b01ffaea98435cc2486729 159 Hamap MF_02045 Phosphoribosylaminoimidazole carboxylase [purE]. 3 158 37.192 T 12-10-2018 IPR033626 Class II PurE GO:0006189 KEGG: 00230+4.1.1.21|MetaCyc: PWY-6124|Reactome: R-HSA-73817 TDE_0687 0b14426ba0b01ffaea98435cc2486729 159 Gene3D G3DSA:3.40.50.7700 1 159 8.3E-55 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TDE_0687 0b14426ba0b01ffaea98435cc2486729 159 SUPERFAMILY SSF52255 2 153 9.42E-36 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TDE_0750 cc8bb141cb22616f95ecb082c4b4bcf8 643 SUPERFAMILY SSF53300 445 616 1.63E-22 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_0750 cc8bb141cb22616f95ecb082c4b4bcf8 643 SMART SM00327 445 629 2.4E-20 T 12-10-2018 IPR002035 von Willebrand factor, type A TDE_0750 cc8bb141cb22616f95ecb082c4b4bcf8 643 Pfam PF13519 von Willebrand factor type A domain 448 554 4.6E-11 T 12-10-2018 IPR002035 von Willebrand factor, type A TDE_0750 cc8bb141cb22616f95ecb082c4b4bcf8 643 Gene3D G3DSA:1.10.8.80 213 298 2.1E-12 T 12-10-2018 TDE_0750 cc8bb141cb22616f95ecb082c4b4bcf8 643 Gene3D G3DSA:3.40.50.410 438 630 5.4E-21 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_0750 cc8bb141cb22616f95ecb082c4b4bcf8 643 Gene3D G3DSA:3.40.50.300 5 167 1.9E-30 T 12-10-2018 TDE_0750 cc8bb141cb22616f95ecb082c4b4bcf8 643 Pfam PF07728 AAA domain (dynein-related subfamily) 33 156 2.7E-10 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TDE_0750 cc8bb141cb22616f95ecb082c4b4bcf8 643 SUPERFAMILY SSF52540 5 283 1.36E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2618 19ea8c9e8dd70bfc3980fd6708770bc2 291 SMART SM00481 2 67 3.6E-20 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TDE_2618 19ea8c9e8dd70bfc3980fd6708770bc2 291 Gene3D G3DSA:1.10.150.650 95 167 4.0E-81 T 12-10-2018 TDE_2618 19ea8c9e8dd70bfc3980fd6708770bc2 291 Gene3D G3DSA:3.20.20.140 2 248 4.0E-81 T 12-10-2018 TDE_2618 19ea8c9e8dd70bfc3980fd6708770bc2 291 SUPERFAMILY SSF89550 1 255 8.5E-44 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TDE_2618 19ea8c9e8dd70bfc3980fd6708770bc2 291 Pfam PF02811 PHP domain 3 90 7.7E-10 T 12-10-2018 IPR004013 PHP domain GO:0003824 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 SUPERFAMILY SSF58104 356 674 4.84E-51 T 12-10-2018 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 606 635 3.7E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 556 3.7E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 3.7E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 558 587 3.7E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 Pfam PF00672 HAMP domain 334 382 6.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 Pfam PF02743 Cache domain 62 296 4.5E-27 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 SMART SM00283 431 678 1.2E-64 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 Gene3D G3DSA:3.30.450.20 176 315 2.6E-24 T 12-10-2018 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 499 656 3.0E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 Gene3D G3DSA:1.10.287.950 334 454 7.3E-10 T 12-10-2018 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 SMART SM00304 334 388 1.9E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 SUPERFAMILY SSF103190 66 210 7.06E-15 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_0850 a88493299ea8b50c1187cab68fbc216b 721 Gene3D G3DSA:1.10.287.950 456 674 7.2E-44 T 12-10-2018 TDE_2682 c3253616ebec7040f53717d4f7844439 656 Pfam PF14804 Jag N-terminus 26 74 5.4E-14 T 12-10-2018 IPR032782 Jag, N-terminal TDE_2682 c3253616ebec7040f53717d4f7844439 656 Pfam PF03961 Flagellar Assembly Protein A 181 631 4.9E-127 T 12-10-2018 IPR005646 Flagellar assembly protein A TDE_2682 c3253616ebec7040f53717d4f7844439 656 Gene3D G3DSA:3.30.30.80 21 75 2.3E-14 T 12-10-2018 IPR038247 Jag, N-terminal domain superfamily TDE_2682 c3253616ebec7040f53717d4f7844439 656 SMART SM01245 25 76 1.2E-14 T 12-10-2018 IPR032782 Jag, N-terminal TDE_1857 6ae1c377b0800191376d4976f7decf4d 173 Gene3D G3DSA:2.40.128.520 24 173 1.3E-13 T 12-10-2018 TDE_1857 6ae1c377b0800191376d4976f7decf4d 173 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 26 156 9.6E-28 T 12-10-2018 IPR019223 Domain of unknown function DUF2147 TDE_0079 559547101faaa4423baf9fa0179726d1 191 SMART SM00530 8 63 1.0E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_0079 559547101faaa4423baf9fa0179726d1 191 SUPERFAMILY SSF47413 4 63 1.19E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_0079 559547101faaa4423baf9fa0179726d1 191 Gene3D G3DSA:2.60.120.10 78 190 3.7E-13 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_0079 559547101faaa4423baf9fa0179726d1 191 SUPERFAMILY SSF51182 44 181 1.14E-17 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily TDE_0079 559547101faaa4423baf9fa0179726d1 191 Pfam PF01381 Helix-turn-helix 9 60 9.9E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_0079 559547101faaa4423baf9fa0179726d1 191 Gene3D G3DSA:1.10.260.40 3 77 1.9E-15 T 12-10-2018 TDE_0079 559547101faaa4423baf9fa0179726d1 191 Pfam PF07883 Cupin domain 108 174 5.6E-9 T 12-10-2018 IPR013096 Cupin 2, conserved barrel TDE_2283 ee2f1d7fd3d56af26da1546994013191 412 Pfam PF02687 FtsX-like permease family 315 406 4.3E-13 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TDE_2283 ee2f1d7fd3d56af26da1546994013191 412 Pfam PF12704 MacB-like periplasmic core domain 19 222 4.7E-18 T 12-10-2018 IPR025857 MacB-like periplasmic core domain TDE_2447 024044b4f4f3b64c8a103d2221588a41 202 SUPERFAMILY SSF52540 1 200 1.85E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2447 024044b4f4f3b64c8a103d2221588a41 202 PRINTS PR01100 Shikimate kinase family signature 55 63 4.0E-8 T 12-10-2018 TDE_2447 024044b4f4f3b64c8a103d2221588a41 202 PRINTS PR01100 Shikimate kinase family signature 27 40 4.0E-8 T 12-10-2018 TDE_2447 024044b4f4f3b64c8a103d2221588a41 202 PRINTS PR01100 Shikimate kinase family signature 3 18 4.0E-8 T 12-10-2018 TDE_2447 024044b4f4f3b64c8a103d2221588a41 202 Gene3D G3DSA:3.40.50.300 2 202 9.7E-42 T 12-10-2018 TDE_2447 024044b4f4f3b64c8a103d2221588a41 202 Hamap MF_00109 Shikimate kinase [aroK]. 1 199 16.445 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TDE_2447 024044b4f4f3b64c8a103d2221588a41 202 Pfam PF01202 Shikimate kinase 96 201 1.5E-5 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TDE_2447 024044b4f4f3b64c8a103d2221588a41 202 Pfam PF01202 Shikimate kinase 11 69 1.6E-16 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TDE_1054 3502a372be3e8d96bbd2327dace4ab2a 692 SUPERFAMILY SSF58104 409 641 3.14E-43 T 12-10-2018 TDE_1054 3502a372be3e8d96bbd2327dace4ab2a 692 Gene3D G3DSA:1.10.287.950 427 644 5.1E-40 T 12-10-2018 TDE_1054 3502a372be3e8d96bbd2327dace4ab2a 692 SMART SM00304 308 359 1.7E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_1054 3502a372be3e8d96bbd2327dace4ab2a 692 SMART SM00283 402 649 1.3E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_1054 3502a372be3e8d96bbd2327dace4ab2a 692 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 618 7.9E-29 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_1054 3502a372be3e8d96bbd2327dace4ab2a 692 Gene3D G3DSA:1.10.287.950 311 419 9.5E-7 T 12-10-2018 TDE_1621 57c547b17624a1fb69fc0211985c94ef 596 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 34 335 3.2E-14 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_1621 57c547b17624a1fb69fc0211985c94ef 596 Gene3D G3DSA:3.40.50.300 1 350 1.1E-27 T 12-10-2018 TDE_1621 57c547b17624a1fb69fc0211985c94ef 596 SUPERFAMILY SSF52540 1 346 6.64E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2744 aac9985c1bbc728d82340db5efbec702 532 SUPERFAMILY SSF116734 75 301 9.16E-45 T 12-10-2018 TDE_2744 aac9985c1bbc728d82340db5efbec702 532 Pfam PF01420 Type I restriction modification DNA specificity domain 87 272 1.4E-17 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TDE_2744 aac9985c1bbc728d82340db5efbec702 532 Pfam PF01420 Type I restriction modification DNA specificity domain 361 525 8.6E-7 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TDE_2744 aac9985c1bbc728d82340db5efbec702 532 Gene3D G3DSA:3.90.220.20 340 532 4.8E-33 T 12-10-2018 TDE_2744 aac9985c1bbc728d82340db5efbec702 532 Gene3D G3DSA:3.90.220.20 66 292 3.1E-46 T 12-10-2018 TDE_2744 aac9985c1bbc728d82340db5efbec702 532 SUPERFAMILY SSF116734 352 526 1.32E-31 T 12-10-2018 TDE_0979 9461938bbbd1d5adae58e4763076d974 478 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 363 463 4.4E-21 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TDE_0979 9461938bbbd1d5adae58e4763076d974 478 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 96 336 4.7E-43 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 TDE_0979 9461938bbbd1d5adae58e4763076d974 478 SUPERFAMILY SSF56601 11 363 4.55E-50 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TDE_0979 9461938bbbd1d5adae58e4763076d974 478 Gene3D G3DSA:2.60.410.10 388 462 4.5E-5 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TDE_0979 9461938bbbd1d5adae58e4763076d974 478 Gene3D G3DSA:3.40.710.10 77 387 9.0E-66 T 12-10-2018 TDE_0979 9461938bbbd1d5adae58e4763076d974 478 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 181 198 1.3E-12 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TDE_0979 9461938bbbd1d5adae58e4763076d974 478 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 126 137 1.3E-12 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TDE_0979 9461938bbbd1d5adae58e4763076d974 478 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 208 221 1.3E-12 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TDE_0979 9461938bbbd1d5adae58e4763076d974 478 SUPERFAMILY SSF69189 369 465 1.14E-7 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TDE_0373 2de9c15f1f20aff56f34b5e59007d69a 523 SUPERFAMILY SSF90123 2 293 9.94E-31 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0373 2de9c15f1f20aff56f34b5e59007d69a 523 SMART SM00382 342 514 2.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0373 2de9c15f1f20aff56f34b5e59007d69a 523 SUPERFAMILY SSF52540 311 515 1.08E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0373 2de9c15f1f20aff56f34b5e59007d69a 523 Gene3D G3DSA:3.40.50.300 310 522 2.1E-43 T 12-10-2018 TDE_0373 2de9c15f1f20aff56f34b5e59007d69a 523 Gene3D G3DSA:1.20.1560.10 1 303 8.3E-23 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0373 2de9c15f1f20aff56f34b5e59007d69a 523 Pfam PF00664 ABC transporter transmembrane region 3 271 6.4E-7 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0373 2de9c15f1f20aff56f34b5e59007d69a 523 Pfam PF00005 ABC transporter 333 468 1.0E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0385 04eba1123213a360486a25ba50bbe966 522 Gene3D G3DSA:3.40.50.300 317 517 2.2E-25 T 12-10-2018 TDE_0385 04eba1123213a360486a25ba50bbe966 522 Pfam PF00664 ABC transporter transmembrane region 18 283 7.7E-8 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0385 04eba1123213a360486a25ba50bbe966 522 SUPERFAMILY SSF52540 326 503 3.73E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0385 04eba1123213a360486a25ba50bbe966 522 Gene3D G3DSA:1.20.1560.10 6 310 4.2E-22 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0385 04eba1123213a360486a25ba50bbe966 522 SUPERFAMILY SSF90123 8 309 1.26E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0385 04eba1123213a360486a25ba50bbe966 522 SMART SM00382 333 517 4.0E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0385 04eba1123213a360486a25ba50bbe966 522 Pfam PF00005 ABC transporter 329 465 4.8E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0040 01a5d7a2ed2d29a23197c6bf429866cc 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 461 539 1.9E-22 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TDE_0040 01a5d7a2ed2d29a23197c6bf429866cc 550 Gene3D G3DSA:3.40.50.12780 2 445 1.9E-143 T 12-10-2018 TDE_0040 01a5d7a2ed2d29a23197c6bf429866cc 550 SUPERFAMILY SSF56801 5 548 9.55E-140 T 12-10-2018 TDE_0040 01a5d7a2ed2d29a23197c6bf429866cc 550 Gene3D G3DSA:3.30.300.310 448 550 2.1E-30 T 12-10-2018 TDE_0040 01a5d7a2ed2d29a23197c6bf429866cc 550 Pfam PF00501 AMP-binding enzyme 39 452 8.5E-78 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TDE_0040 01a5d7a2ed2d29a23197c6bf429866cc 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 202 213 - T 12-10-2018 IPR020845 AMP-binding, conserved site TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 SUPERFAMILY SSF55052 188 263 3.4E-13 T 12-10-2018 IPR035891 CheY-binding domain of CheA TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 SMART SM00260 642 782 4.0E-49 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 SMART SM01231 339 464 1.4E-16 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 SUPERFAMILY SSF47226 10 129 1.23E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Pfam PF07194 P2 response regulator binding domain 192 263 5.8E-12 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Gene3D G3DSA:2.30.30.40 650 778 2.1E-40 T 12-10-2018 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Gene3D G3DSA:1.20.120.160 5 148 1.6E-36 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Gene3D G3DSA:3.30.565.10 463 649 3.6E-58 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Pfam PF01627 Hpt domain 11 99 3.8E-18 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 SMART SM00073 9 106 1.2E-27 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 604 2.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 568 2.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 628 2.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 647 2.7E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 649 7.9E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 340 464 7.2E-31 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 SUPERFAMILY SSF55874 466 648 3.54E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Gene3D G3DSA:1.10.287.560 340 407 1.8E-5 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Gene3D G3DSA:2.40.50.180 673 737 2.1E-40 T 12-10-2018 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 SUPERFAMILY SSF50341 649 782 1.18E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 Pfam PF01584 CheW-like domain 654 783 9.7E-29 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TDE_1491 2553e2e0c742213ac7d42bd2b88c37bd 801 SMART SM00387 509 650 4.3E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0852 47879158bcab1747b27d65b6e9436ba8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 1.0E-60 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0852 47879158bcab1747b27d65b6e9436ba8 142 Pfam PF00572 Ribosomal protein L13 15 137 1.2E-51 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TDE_0852 47879158bcab1747b27d65b6e9436ba8 142 PIRSF PIRSF002181 1 142 1.1E-45 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TDE_0852 47879158bcab1747b27d65b6e9436ba8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 25.686 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TDE_0852 47879158bcab1747b27d65b6e9436ba8 142 Gene3D G3DSA:3.90.1180.10 1 142 2.4E-56 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TDE_0852 47879158bcab1747b27d65b6e9436ba8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 TDE_0852 47879158bcab1747b27d65b6e9436ba8 142 SUPERFAMILY SSF52161 1 139 1.31E-52 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TDE_2086 8d80aa105a12358c02016e219caa2ada 172 SMART SM00271 2 60 7.4E-30 T 12-10-2018 IPR001623 DnaJ domain TDE_2086 8d80aa105a12358c02016e219caa2ada 172 Gene3D G3DSA:1.10.287.110 1 107 1.1E-30 T 12-10-2018 IPR036869 Chaperone J-domain superfamily TDE_2086 8d80aa105a12358c02016e219caa2ada 172 Pfam PF00226 DnaJ domain 3 65 6.2E-29 T 12-10-2018 IPR001623 DnaJ domain TDE_2086 8d80aa105a12358c02016e219caa2ada 172 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 12-10-2018 IPR018253 DnaJ domain, conserved site TDE_2086 8d80aa105a12358c02016e219caa2ada 172 SUPERFAMILY SSF46565 2 93 2.22E-30 T 12-10-2018 IPR036869 Chaperone J-domain superfamily TDE_2086 8d80aa105a12358c02016e219caa2ada 172 PRINTS PR00625 DnaJ domain signature 5 23 1.8E-23 T 12-10-2018 IPR001623 DnaJ domain TDE_2086 8d80aa105a12358c02016e219caa2ada 172 PRINTS PR00625 DnaJ domain signature 60 79 1.8E-23 T 12-10-2018 IPR001623 DnaJ domain TDE_2086 8d80aa105a12358c02016e219caa2ada 172 PRINTS PR00625 DnaJ domain signature 23 38 1.8E-23 T 12-10-2018 IPR001623 DnaJ domain TDE_2086 8d80aa105a12358c02016e219caa2ada 172 PRINTS PR00625 DnaJ domain signature 40 60 1.8E-23 T 12-10-2018 IPR001623 DnaJ domain TDE_2030 c13388df3c70c7647de449e2fa1ba52e 261 Pfam PF03330 Lytic transglycolase 29 115 1.2E-24 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain TDE_2030 c13388df3c70c7647de449e2fa1ba52e 261 Gene3D G3DSA:3.30.70.1070 188 233 7.0E-6 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TDE_2030 c13388df3c70c7647de449e2fa1ba52e 261 SUPERFAMILY SSF50685 32 120 6.28E-14 T 12-10-2018 IPR036908 RlpA-like domain superfamily TDE_2030 c13388df3c70c7647de449e2fa1ba52e 261 Gene3D G3DSA:2.40.40.10 26 120 1.8E-37 T 12-10-2018 IPR036908 RlpA-like domain superfamily TDE_2030 c13388df3c70c7647de449e2fa1ba52e 261 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 19 119 22.825 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 TDE_2030 c13388df3c70c7647de449e2fa1ba52e 261 Pfam PF05036 Sporulation related domain 190 231 4.2E-8 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 TDE_2030 c13388df3c70c7647de449e2fa1ba52e 261 SUPERFAMILY SSF110997 188 257 1.57E-9 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TDE_2030 c13388df3c70c7647de449e2fa1ba52e 261 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 31 217 3.5E-47 T 12-10-2018 IPR012997 Rare lipoprotein A TDE_1931 5d1a95853b8a563471439a88896101a5 136 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 9 127 1.4E-40 T 12-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 TDE_1931 5d1a95853b8a563471439a88896101a5 136 Gene3D G3DSA:3.40.140.10 2 133 1.0E-47 T 12-10-2018 TDE_1931 5d1a95853b8a563471439a88896101a5 136 SUPERFAMILY SSF53927 6 118 6.86E-42 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TDE_1931 5d1a95853b8a563471439a88896101a5 136 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 101 1.9E-19 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TDE_1931 5d1a95853b8a563471439a88896101a5 136 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 98 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TDE_0817 ace2e3314d75082ef8ac47a48a89c78a 359 Gene3D G3DSA:3.30.565.10 83 193 3.5E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0817 ace2e3314d75082ef8ac47a48a89c78a 359 Pfam PF14213 STAS-like domain of unknown function (DUF4325) 282 332 1.8E-12 T 12-10-2018 IPR025474 Domain of unknown function DUF4325 TDE_0817 ace2e3314d75082ef8ac47a48a89c78a 359 SUPERFAMILY SSF55874 106 270 1.83E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0817 ace2e3314d75082ef8ac47a48a89c78a 359 SUPERFAMILY SSF46785 23 85 1.15E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0817 ace2e3314d75082ef8ac47a48a89c78a 359 Pfam PF13581 Histidine kinase-like ATPase domain 97 200 6.8E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_1004 43368b87e4fd0239c2da0cf2aef68b59 286 PRINTS PR00207 Flagellin signature 109 132 1.7E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TDE_1004 43368b87e4fd0239c2da0cf2aef68b59 286 PRINTS PR00207 Flagellin signature 35 52 1.7E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TDE_1004 43368b87e4fd0239c2da0cf2aef68b59 286 PRINTS PR00207 Flagellin signature 74 93 1.7E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TDE_1004 43368b87e4fd0239c2da0cf2aef68b59 286 Gene3D G3DSA:1.20.1330.10 48 236 5.4E-53 T 12-10-2018 TDE_1004 43368b87e4fd0239c2da0cf2aef68b59 286 SUPERFAMILY SSF64518 1 286 9.02E-82 T 12-10-2018 TDE_1004 43368b87e4fd0239c2da0cf2aef68b59 286 Gene3D G3DSA:1.10.8.410 237 286 5.1E-27 T 12-10-2018 TDE_1004 43368b87e4fd0239c2da0cf2aef68b59 286 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 2.3E-36 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TDE_1004 43368b87e4fd0239c2da0cf2aef68b59 286 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 285 7.9E-28 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TDE_0294 44a84a40b8a9e093f13d1459b7d2b24a 245 Pfam PF02080 TrkA-C domain 149 211 3.8E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TDE_0294 44a84a40b8a9e093f13d1459b7d2b24a 245 SUPERFAMILY SSF51735 2 128 7.4E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0294 44a84a40b8a9e093f13d1459b7d2b24a 245 Gene3D G3DSA:3.40.50.720 1 135 2.1E-21 T 12-10-2018 TDE_0294 44a84a40b8a9e093f13d1459b7d2b24a 245 Gene3D G3DSA:3.30.70.1450 141 217 2.4E-18 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_0294 44a84a40b8a9e093f13d1459b7d2b24a 245 Pfam PF02254 TrkA-N domain 4 119 2.5E-16 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TDE_0294 44a84a40b8a9e093f13d1459b7d2b24a 245 SUPERFAMILY SSF116726 136 214 3.01E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TDE_2737 86ee8d0df6189381fd7f77abd5e503a5 246 Pfam PF13306 Leucine rich repeats (6 copies) 121 208 1.2E-6 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_2737 86ee8d0df6189381fd7f77abd5e503a5 246 Gene3D G3DSA:3.80.10.10 61 243 1.5E-11 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 ProSitePatterns PS00211 ABC transporters family signature. 461 475 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 Pfam PF12848 ABC transporter 232 314 3.8E-22 T 12-10-2018 IPR032781 ABC-transporter extension domain TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 Pfam PF00005 ABC transporter 19 192 5.6E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 Pfam PF16326 ABC transporter C-terminal domain 584 658 2.2E-8 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 SUPERFAMILY SSF52540 3 272 7.87E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 Gene3D G3DSA:3.40.50.300 290 577 1.3E-50 T 12-10-2018 TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 SMART SM00382 28 239 5.7E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 SMART SM00382 367 534 5.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 Gene3D G3DSA:3.40.50.300 4 286 9.5E-58 T 12-10-2018 TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 SUPERFAMILY SSF52540 305 533 4.09E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1403 c55d4136d0e748c4d579012a2f69c185 667 Pfam PF00005 ABC transporter 359 489 5.2E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2625 f5c8cea243eab2c7b1daa89ed6c93611 579 Pfam PF00005 ABC transporter 351 499 2.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2625 f5c8cea243eab2c7b1daa89ed6c93611 579 Pfam PF00664 ABC transporter transmembrane region 41 286 2.0E-12 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2625 f5c8cea243eab2c7b1daa89ed6c93611 579 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2625 f5c8cea243eab2c7b1daa89ed6c93611 579 Gene3D G3DSA:1.20.1560.10 5 319 1.1E-30 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2625 f5c8cea243eab2c7b1daa89ed6c93611 579 SUPERFAMILY SSF52540 330 566 1.49E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2625 f5c8cea243eab2c7b1daa89ed6c93611 579 SMART SM00382 359 545 7.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2625 f5c8cea243eab2c7b1daa89ed6c93611 579 SUPERFAMILY SSF90123 6 322 6.54E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2625 f5c8cea243eab2c7b1daa89ed6c93611 579 Gene3D G3DSA:3.40.50.300 329 577 1.9E-83 T 12-10-2018 TDE_1762 968d7006150b0c111570a3d77c6c88e7 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 209 7.8E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TDE_1762 968d7006150b0c111570a3d77c6c88e7 239 Gene3D G3DSA:1.10.150.520 18 113 1.7E-30 T 12-10-2018 TDE_1762 968d7006150b0c111570a3d77c6c88e7 239 SUPERFAMILY SSF56784 1 237 1.17E-30 T 12-10-2018 IPR036412 HAD-like superfamily TDE_1762 968d7006150b0c111570a3d77c6c88e7 239 Gene3D G3DSA:3.40.50.1000 8 236 1.7E-30 T 12-10-2018 IPR023214 HAD superfamily TDE_1762 968d7006150b0c111570a3d77c6c88e7 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 89 213 1.3E-15 T 12-10-2018 TDE_0941 7aaf76f7c1e14d3ead06bd13b6ed5ef3 159 Gene3D G3DSA:3.90.1720.10 28 157 5.0E-40 T 12-10-2018 TDE_0941 7aaf76f7c1e14d3ead06bd13b6ed5ef3 159 Pfam PF00877 NlpC/P60 family 42 146 3.9E-26 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain TDE_0941 7aaf76f7c1e14d3ead06bd13b6ed5ef3 159 SUPERFAMILY SSF54001 25 152 3.92E-37 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TDE_0455 67fa68d082fabdd58816ef22498b4b22 401 Gene3D G3DSA:3.30.70.890 216 375 4.0E-66 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TDE_0455 67fa68d082fabdd58816ef22498b4b22 401 PIRSF PIRSF000530 1 401 1.2E-96 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_0455 67fa68d082fabdd58816ef22498b4b22 401 Pfam PF10509 Galactokinase galactose-binding signature 13 62 6.6E-8 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_0455 67fa68d082fabdd58816ef22498b4b22 401 PRINTS PR00959 Mevalonate kinase family signature 30 54 9.6E-7 T 12-10-2018 TDE_0455 67fa68d082fabdd58816ef22498b4b22 401 PRINTS PR00959 Mevalonate kinase family signature 176 195 9.6E-7 T 12-10-2018 TDE_0455 67fa68d082fabdd58816ef22498b4b22 401 PRINTS PR00959 Mevalonate kinase family signature 347 364 9.6E-7 T 12-10-2018 TDE_0455 67fa68d082fabdd58816ef22498b4b22 401 SUPERFAMILY SSF55060 220 400 1.64E-36 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TDE_0455 67fa68d082fabdd58816ef22498b4b22 401 Gene3D G3DSA:3.30.230.10 27 215 4.0E-66 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_0455 67fa68d082fabdd58816ef22498b4b22 401 SUPERFAMILY SSF54211 5 216 2.45E-23 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 Pfam PF04434 SWIM zinc finger 122 142 2.7E-6 T 12-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 Pfam PF00271 Helicase conserved C-terminal domain 1026 1138 5.5E-18 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 Pfam PF12419 SNF2 Helicase protein 572 699 2.0E-23 T 12-10-2018 IPR022138 Helicase SWF/SNF-related TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 Gene3D G3DSA:1.20.120.850 964 1188 1.4E-85 T 12-10-2018 TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 Gene3D G3DSA:3.40.50.300 949 1152 1.4E-85 T 12-10-2018 TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 Pfam PF00176 SNF2 family N-terminal domain 749 1011 1.7E-58 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 SUPERFAMILY SSF52540 943 1193 5.32E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 SMART SM00487 729 914 1.0E-32 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 SUPERFAMILY SSF52540 710 940 3.82E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 Gene3D G3DSA:3.40.50.10810 704 939 4.8E-67 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily TDE_0006 709eac76b917d63a3bb84d1b3be9b28e 1194 SMART SM00490 1054 1138 4.1E-20 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 PIRSF PIRSF037677 2 866 4.8E-161 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 SUPERFAMILY SSF55271 4 107 3.4E-36 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 713 729 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 SUPERFAMILY SSF53150 106 278 2.75E-33 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Gene3D G3DSA:1.10.1420.10 413 548 5.6E-81 T 12-10-2018 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 SUPERFAMILY SSF48334 279 577 2.75E-74 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Pfam PF05188 MutS domain II 120 264 1.3E-18 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Pfam PF05190 MutS family domain IV 441 532 2.7E-22 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 5 880 22.974 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Pfam PF05192 MutS domain III 281 572 1.0E-35 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 SUPERFAMILY SSF52540 580 817 3.85E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Pfam PF01624 MutS domain I 6 111 1.4E-37 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Gene3D G3DSA:3.40.1170.10 1 113 2.7E-41 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 SMART SM00534 632 817 3.8E-110 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Gene3D G3DSA:3.40.50.300 581 873 2.7E-93 T 12-10-2018 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Pfam PF00488 MutS domain V 636 815 6.2E-80 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 6 885 1.3E-253 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Gene3D G3DSA:1.10.1420.10 278 573 5.6E-81 T 12-10-2018 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 Gene3D G3DSA:3.30.420.110 119 274 7.6E-34 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TDE_2603 fc215c23ca88c4ff9a54083d415a6ea6 891 SMART SM00533 296 605 3.2E-86 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TDE_0744 b60697a35665062bbe2dca8245eabbb1 105 SUPERFAMILY SSF52833 2 104 2.47E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily TDE_0744 b60697a35665062bbe2dca8245eabbb1 105 Gene3D G3DSA:3.40.30.10 1 105 2.3E-24 T 12-10-2018 TDE_0744 b60697a35665062bbe2dca8245eabbb1 105 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TDE_0744 b60697a35665062bbe2dca8245eabbb1 105 PIRSF PIRSF000077 1 105 3.4E-23 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TDE_0744 b60697a35665062bbe2dca8245eabbb1 105 Pfam PF00085 Thioredoxin 2 103 3.5E-20 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 TDE_0322 053a8fddc4054e23346e6181dc2bbef5 99 Gene3D G3DSA:3.30.70.120 1 97 1.7E-20 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TDE_0322 053a8fddc4054e23346e6181dc2bbef5 99 SMART SM00938 5 99 2.0E-5 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TDE_0322 053a8fddc4054e23346e6181dc2bbef5 99 SUPERFAMILY SSF54913 5 98 1.11E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TDE_0322 053a8fddc4054e23346e6181dc2bbef5 99 PRINTS PR00340 P-II protein signature 48 71 4.8E-7 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TDE_0322 053a8fddc4054e23346e6181dc2bbef5 99 PRINTS PR00340 P-II protein signature 24 42 4.8E-7 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TDE_0322 053a8fddc4054e23346e6181dc2bbef5 99 PRINTS PR00340 P-II protein signature 3 18 4.8E-7 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TDE_0322 053a8fddc4054e23346e6181dc2bbef5 99 PRINTS PR00340 P-II protein signature 79 99 4.8E-7 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TDE_0322 053a8fddc4054e23346e6181dc2bbef5 99 Pfam PF00543 Nitrogen regulatory protein P-II 6 99 6.0E-11 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TDE_1426 51249996e6312cc90fd182e232241ed7 368 SUPERFAMILY SSF53383 17 366 1.95E-107 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_1426 51249996e6312cc90fd182e232241ed7 368 Gene3D G3DSA:3.40.640.10 1 248 6.8E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_1426 51249996e6312cc90fd182e232241ed7 368 Gene3D G3DSA:3.90.1150.10 250 368 3.2E-38 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_1426 51249996e6312cc90fd182e232241ed7 368 PIRSF PIRSF000390 4 368 2.1E-102 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TDE_1426 51249996e6312cc90fd182e232241ed7 368 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 363 3.5E-118 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TDE_0332 b1de024a024d49806d9dfaaff866d3f3 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 8.7E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0332 b1de024a024d49806d9dfaaff866d3f3 208 SUPERFAMILY SSF46689 3 73 3.28E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_0332 b1de024a024d49806d9dfaaff866d3f3 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TDE_0332 b1de024a024d49806d9dfaaff866d3f3 208 Gene3D G3DSA:1.10.357.10 8 203 1.5E-23 T 12-10-2018 TDE_0332 b1de024a024d49806d9dfaaff866d3f3 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0332 b1de024a024d49806d9dfaaff866d3f3 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_2589 3f7c2745088439732adaf39cfd858347 468 Gene3D G3DSA:2.30.250.10 106 251 7.8E-148 T 12-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 TDE_2589 3f7c2745088439732adaf39cfd858347 468 SUPERFAMILY SSF53187 9 468 1.29E-97 T 12-10-2018 TDE_2589 3f7c2745088439732adaf39cfd858347 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 434 449 3.5E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_2589 3f7c2745088439732adaf39cfd858347 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 128 148 3.5E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_2589 3f7c2745088439732adaf39cfd858347 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 164 181 3.5E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_2589 3f7c2745088439732adaf39cfd858347 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 296 314 3.5E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_2589 3f7c2745088439732adaf39cfd858347 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 95 111 3.5E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_2589 3f7c2745088439732adaf39cfd858347 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 340 356 3.5E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_2589 3f7c2745088439732adaf39cfd858347 468 Gene3D G3DSA:3.40.630.10 45 458 7.8E-148 T 12-10-2018 TDE_2589 3f7c2745088439732adaf39cfd858347 468 SUPERFAMILY SSF101821 107 246 4.76E-31 T 12-10-2018 TDE_2589 3f7c2745088439732adaf39cfd858347 468 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 32 467 4.6E-90 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 Gene3D G3DSA:1.10.274.10 24 155 3.0E-57 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 133 4.0E-21 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 581 3.6E-152 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 461 476 8.1E-17 T 12-10-2018 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 478 493 8.1E-17 T 12-10-2018 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 307 326 8.1E-17 T 12-10-2018 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 461 479 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 SUPERFAMILY SSF51621 271 566 4.45E-91 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 266 559 2.1E-97 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 Gene3D G3DSA:3.50.30.10 6 242 3.0E-57 T 12-10-2018 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 Pfam PF00391 PEP-utilising enzyme, mobile domain 160 234 6.3E-15 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 SUPERFAMILY SSF47831 27 149 5.49E-20 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 SUPERFAMILY SSF52009 133 254 3.27E-25 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 PIRSF PIRSF000732 1 592 7.1E-204 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 TDE_0084 982e12e0a0f58d06ad21e1285aa3e217 594 Gene3D G3DSA:3.20.20.60 243 590 4.8E-106 T 12-10-2018 TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 88 451 7.8E-77 T 12-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 Pfam PF12161 HsdM N-terminal domain 11 122 2.5E-14 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 Gene3D G3DSA:3.40.50.150 137 430 7.0E-87 T 12-10-2018 TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 Gene3D G3DSA:1.20.1260.30 2 70 9.9E-16 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 SUPERFAMILY SSF53335 6 486 2.81E-119 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 176 2.5E-21 T 12-10-2018 TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 262 274 2.5E-21 T 12-10-2018 TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 188 202 2.5E-21 T 12-10-2018 TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 321 2.5E-21 T 12-10-2018 TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 Pfam PF02384 N-6 DNA Methylase 137 445 3.0E-102 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TDE_0369 80e166b2b55c2d61bc8909eb6d6d2de3 871 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TDE_0577 25d23e165ddc05716649173ec57f590a 103 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 26 95 3.9E-5 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 TDE_0577 25d23e165ddc05716649173ec57f590a 103 Gene3D G3DSA:1.10.20.60 4 98 8.7E-12 T 12-10-2018 TDE_0577 25d23e165ddc05716649173ec57f590a 103 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 8 99 1.0E-13 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 TDE_0577 25d23e165ddc05716649173ec57f590a 103 SUPERFAMILY SSF141000 7 98 2.75E-15 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 TDE_2040 c38c1e1abeb7ff2a7aef84f123e24870 226 Pfam PF00005 ABC transporter 26 173 2.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2040 c38c1e1abeb7ff2a7aef84f123e24870 226 Gene3D G3DSA:3.40.50.300 4 226 2.3E-58 T 12-10-2018 TDE_2040 c38c1e1abeb7ff2a7aef84f123e24870 226 SUPERFAMILY SSF52540 6 225 1.23E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2040 c38c1e1abeb7ff2a7aef84f123e24870 226 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2040 c38c1e1abeb7ff2a7aef84f123e24870 226 SMART SM00382 34 224 1.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1413 a8d7482297873be0531d2d24c74d1c81 433 Pfam PF13714 Phosphoenolpyruvate phosphomutase 149 407 3.3E-64 T 12-10-2018 TDE_1413 a8d7482297873be0531d2d24c74d1c81 433 SUPERFAMILY SSF52374 3 130 4.13E-14 T 12-10-2018 TDE_1413 a8d7482297873be0531d2d24c74d1c81 433 TIGRFAM TIGR02320 PEP_mutase: phosphoenolpyruvate mutase 149 432 2.2E-125 T 12-10-2018 IPR012698 Phosphoenolpyruvate phosphomutase, core GO:0050188 KEGG: 00440+5.4.2.9|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7419|MetaCyc: PWY-7510|MetaCyc: PWY-7769 TDE_1413 a8d7482297873be0531d2d24c74d1c81 433 Gene3D G3DSA:3.40.50.620 2 135 1.2E-23 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1413 a8d7482297873be0531d2d24c74d1c81 433 Gene3D G3DSA:3.20.20.60 136 432 9.7E-71 T 12-10-2018 TDE_1413 a8d7482297873be0531d2d24c74d1c81 433 SUPERFAMILY SSF51621 95 432 7.33E-67 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TDE_1413 a8d7482297873be0531d2d24c74d1c81 433 Pfam PF01467 Cytidylyltransferase-like 10 97 2.3E-10 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TDE_1413 a8d7482297873be0531d2d24c74d1c81 433 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 65 2.3E-7 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TDE_1254 497e25559ab9457ffc7efce8887c5ba9 170 SMART SM00463 87 170 1.1E-19 T 12-10-2018 IPR002625 Smr domain TDE_1254 497e25559ab9457ffc7efce8887c5ba9 170 Gene3D G3DSA:3.30.1370.110 78 170 7.7E-22 T 12-10-2018 TDE_1254 497e25559ab9457ffc7efce8887c5ba9 170 Pfam PF01713 Smr domain 90 170 1.0E-19 T 12-10-2018 IPR002625 Smr domain TDE_1254 497e25559ab9457ffc7efce8887c5ba9 170 SUPERFAMILY SSF160443 87 170 9.81E-17 T 12-10-2018 IPR036063 Smr domain superfamily TDE_2696 047aa7445bd88567133719edcf823e16 312 SUPERFAMILY SSF48452 105 194 2.14E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2696 047aa7445bd88567133719edcf823e16 312 Gene3D G3DSA:1.25.40.10 7 219 4.4E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2696 047aa7445bd88567133719edcf823e16 312 SMART SM00028 156 189 31.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2696 047aa7445bd88567133719edcf823e16 312 SMART SM00028 122 155 0.0015 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2657 5ba95009239612af476b3bd6c6de9a5b 222 SUPERFAMILY SSF53790 5 218 1.44E-35 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TDE_2657 5ba95009239612af476b3bd6c6de9a5b 222 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 196 8.5E-35 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TDE_2657 5ba95009239612af476b3bd6c6de9a5b 222 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TDE_2657 5ba95009239612af476b3bd6c6de9a5b 222 PIRSF PIRSF036427 1 222 1.1E-47 T 12-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 TDE_2657 5ba95009239612af476b3bd6c6de9a5b 222 Gene3D G3DSA:3.30.950.10 123 221 1.2E-8 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TDE_2657 5ba95009239612af476b3bd6c6de9a5b 222 Gene3D G3DSA:3.40.1010.10 2 121 6.4E-26 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TDE_0287 21351a4f3bcca44d30c0697a4e5b3541 561 Gene3D G3DSA:3.40.50.300 311 553 2.1E-41 T 12-10-2018 TDE_0287 21351a4f3bcca44d30c0697a4e5b3541 561 Gene3D G3DSA:1.20.1560.10 6 310 7.4E-13 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0287 21351a4f3bcca44d30c0697a4e5b3541 561 Pfam PF00005 ABC transporter 337 483 7.4E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0287 21351a4f3bcca44d30c0697a4e5b3541 561 SUPERFAMILY SSF52540 322 542 1.15E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0287 21351a4f3bcca44d30c0697a4e5b3541 561 SMART SM00382 346 528 2.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0287 21351a4f3bcca44d30c0697a4e5b3541 561 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 350 363 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TDE_0287 21351a4f3bcca44d30c0697a4e5b3541 561 SUPERFAMILY SSF90123 13 307 5.76E-15 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0162 a652882fd54882ab7526a2220777ce53 1634 Pfam PF13860 FlgD Ig-like domain 1566 1620 5.7E-9 T 12-10-2018 IPR025965 FlgD Ig-like domain TDE_0162 a652882fd54882ab7526a2220777ce53 1634 Gene3D G3DSA:2.60.40.4070 1550 1629 1.7E-10 T 12-10-2018 TDE_2038 2d1c53f7d72f5e8b5e7ba036a5db1e82 165 Gene3D G3DSA:4.10.860.10 126 164 1.7E-5 T 12-10-2018 TDE_2038 2d1c53f7d72f5e8b5e7ba036a5db1e82 165 PIRSF PIRSF015034 1 164 4.2E-30 T 12-10-2018 IPR025542 YacH protein TDE_2038 2d1c53f7d72f5e8b5e7ba036a5db1e82 165 SUPERFAMILY SSF46600 128 159 3.92E-7 T 12-10-2018 IPR036876 UVR domain superfamily TDE_2038 2d1c53f7d72f5e8b5e7ba036a5db1e82 165 Pfam PF02151 UvrB/uvrC motif 129 159 8.3E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 TDE_1386 bb3d51a86ddef364b0d154506ff14ac5 611 SUPERFAMILY SSF58104 316 569 4.58E-49 T 12-10-2018 TDE_1386 bb3d51a86ddef364b0d154506ff14ac5 611 SMART SM00283 321 568 5.0E-57 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_1386 bb3d51a86ddef364b0d154506ff14ac5 611 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 384 536 4.1E-30 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_1386 bb3d51a86ddef364b0d154506ff14ac5 611 Gene3D G3DSA:1.10.287.950 295 565 7.0E-50 T 12-10-2018 TDE_1386 bb3d51a86ddef364b0d154506ff14ac5 611 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 300 604 0.003 T 12-10-2018 TDE_0230 392d5878820cfc0f743100de4d7907f6 360 SUPERFAMILY SSF52540 7 324 7.68E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0230 392d5878820cfc0f743100de4d7907f6 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 9 352 9.1E-67 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TDE_0230 392d5878820cfc0f743100de4d7907f6 360 Gene3D G3DSA:1.20.1050.90 120 298 2.6E-77 T 12-10-2018 TDE_0230 392d5878820cfc0f743100de4d7907f6 360 Gene3D G3DSA:3.40.50.300 9 330 2.6E-77 T 12-10-2018 TDE_0230 392d5878820cfc0f743100de4d7907f6 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 59.933 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TDE_0230 392d5878820cfc0f743100de4d7907f6 360 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TDE_0230 392d5878820cfc0f743100de4d7907f6 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 9 353 5.4E-15 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TDE_0856 ddec1f82cf47a98c33a18d8a9c91854e 395 SUPERFAMILY SSF53639 191 382 1.16E-18 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TDE_0856 ddec1f82cf47a98c33a18d8a9c91854e 395 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 182 4.1E-41 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal TDE_0856 ddec1f82cf47a98c33a18d8a9c91854e 395 SUPERFAMILY SSF53639 2 187 7.26E-44 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TDE_0856 ddec1f82cf47a98c33a18d8a9c91854e 395 Gene3D G3DSA:3.40.225.10 212 382 6.4E-9 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TDE_0856 ddec1f82cf47a98c33a18d8a9c91854e 395 Gene3D G3DSA:3.40.225.10 2 203 3.2E-50 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TDE_0856 ddec1f82cf47a98c33a18d8a9c91854e 395 SMART SM01007 8 185 3.3E-48 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal TDE_2437 96f1e631010eb94b47ff24f61cfb182a 179 Pfam PF00027 Cyclic nucleotide-binding domain 50 138 1.9E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_2437 96f1e631010eb94b47ff24f61cfb182a 179 SUPERFAMILY SSF51206 31 159 1.02E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_2437 96f1e631010eb94b47ff24f61cfb182a 179 SMART SM00100 31 154 9.0E-4 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_2437 96f1e631010eb94b47ff24f61cfb182a 179 Gene3D G3DSA:2.60.120.10 1 168 6.1E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_2210 43fd2c43d479c1fbbf2fc36a50f77a44 435 SUPERFAMILY SSF51126 9 324 4.71E-26 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_2210 43fd2c43d479c1fbbf2fc36a50f77a44 435 Pfam PF07602 Protein of unknown function (DUF1565) 29 88 6.8E-8 T 12-10-2018 IPR011459 Domain of unknown function DUF1565 TDE_0782 35f57d867173ab640e84277ce11dbada 179 SUPERFAMILY SSF56053 1 83 2.88E-25 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0782 35f57d867173ab640e84277ce11dbada 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0782 35f57d867173ab640e84277ce11dbada 179 PIRSF PIRSF002162 1 177 3.8E-48 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0782 35f57d867173ab640e84277ce11dbada 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 8.8E-68 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TDE_0782 35f57d867173ab640e84277ce11dbada 179 SUPERFAMILY SSF56053 84 176 1.32E-30 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0782 35f57d867173ab640e84277ce11dbada 179 Gene3D G3DSA:3.90.930.12 84 179 1.2E-33 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0782 35f57d867173ab640e84277ce11dbada 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 34.839 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TDE_0782 35f57d867173ab640e84277ce11dbada 179 Pfam PF00347 Ribosomal protein L6 92 164 5.4E-15 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0782 35f57d867173ab640e84277ce11dbada 179 Pfam PF00347 Ribosomal protein L6 11 83 9.5E-15 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0782 35f57d867173ab640e84277ce11dbada 179 Gene3D G3DSA:3.90.930.12 1 83 2.9E-28 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0782 35f57d867173ab640e84277ce11dbada 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 3.1E-29 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TDE_0782 35f57d867173ab640e84277ce11dbada 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 3.1E-29 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TDE_0782 35f57d867173ab640e84277ce11dbada 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.1E-29 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TDE_2592 64c7405c4ee5b969ab66aa4449a3fe82 208 SUPERFAMILY SSF54928 133 182 4.18E-5 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 TDE_2592 64c7405c4ee5b969ab66aa4449a3fe82 208 Pfam PF03880 DbpA RNA binding domain 103 172 2.3E-20 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain TDE_2592 64c7405c4ee5b969ab66aa4449a3fe82 208 Gene3D G3DSA:3.30.70.330 102 176 2.4E-18 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TDE_0525 e860bcc111c8d67b9c869a38dc0c6a08 177 Gene3D G3DSA:2.60.40.4070 85 145 1.4E-6 T 12-10-2018 TDE_0525 e860bcc111c8d67b9c869a38dc0c6a08 177 Pfam PF10029 Predicted periplasmic protein (DUF2271) 29 155 2.0E-27 T 12-10-2018 IPR014469 Protein of unknown function DUF2271 TDE_2749 786aa67ae09900355d4763c8c03804f0 116 Pfam PF05534 HicB family 55 104 6.8E-23 T 12-10-2018 IPR008651 Uncharacterised protein family HicB TDE_2749 786aa67ae09900355d4763c8c03804f0 116 SUPERFAMILY SSF47598 69 111 6.67E-9 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TDE_2749 786aa67ae09900355d4763c8c03804f0 116 SUPERFAMILY SSF143100 1 76 1.29E-11 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like TDE_0278 9e24765f03b32e575968bcefbf4e2f23 93 SUPERFAMILY SSF143120 15 63 1.44E-6 T 12-10-2018 IPR036165 YefM-like superfamily TDE_0278 9e24765f03b32e575968bcefbf4e2f23 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 15 68 3.7E-7 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 SUPERFAMILY SSF47323 365 491 9.42E-26 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 Gene3D G3DSA:1.20.120.1910 320 491 1.1E-37 T 12-10-2018 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 SMART SM00840 379 432 0.0038 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 204 222 1.4E-23 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.4E-23 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.4E-23 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 235 256 1.4E-23 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 SUPERFAMILY SSF52374 3 328 6.44E-87 T 12-10-2018 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 491 3.1E-145 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 Pfam PF09190 DALR domain 379 428 9.3E-5 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 491 34.637 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 327 1.9E-99 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 TDE_0092 39fda10130d76c11190e96ef442e4b3c 492 Gene3D G3DSA:3.40.50.620 1 319 1.7E-131 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1422 14ca9f0f322ad10f95c533b175106b40 341 Gene3D G3DSA:3.90.550.10 1 246 1.5E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1422 14ca9f0f322ad10f95c533b175106b40 341 Pfam PF00535 Glycosyl transferase family 2 6 145 2.9E-32 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TDE_1422 14ca9f0f322ad10f95c533b175106b40 341 SUPERFAMILY SSF53448 5 222 2.61E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_0266 4fb754d2367d72b714d1659a5aefcba4 263 SUPERFAMILY SSF52467 9 218 3.32E-16 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TDE_0266 4fb754d2367d72b714d1659a5aefcba4 263 Pfam PF13289 SIR2-like domain 102 243 1.6E-25 T 12-10-2018 IPR039444 SIR2-like domain TDE_0266 4fb754d2367d72b714d1659a5aefcba4 263 PIRSF PIRSF033541 1 262 7.2E-144 T 12-10-2018 IPR014583 Uncharacterised protein family, Sir2-like TDE_2446 663119d31aaf1557f21bbd297a4d3c1b 491 SMART SM00919 198 429 4.9E-94 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TDE_2446 663119d31aaf1557f21bbd297a4d3c1b 491 Gene3D G3DSA:3.40.50.10380 1 195 3.8E-61 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 TDE_2446 663119d31aaf1557f21bbd297a4d3c1b 491 Pfam PF00390 Malic enzyme, N-terminal domain 56 186 1.9E-16 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TDE_2446 663119d31aaf1557f21bbd297a4d3c1b 491 Gene3D G3DSA:3.40.50.720 196 489 6.2E-103 T 12-10-2018 TDE_2446 663119d31aaf1557f21bbd297a4d3c1b 491 SUPERFAMILY SSF51735 199 476 7.77E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_2446 663119d31aaf1557f21bbd297a4d3c1b 491 Pfam PF03949 Malic enzyme, NAD binding domain 199 412 2.6E-22 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TDE_2446 663119d31aaf1557f21bbd297a4d3c1b 491 PIRSF PIRSF000106 1 478 3.6E-105 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 TDE_2446 663119d31aaf1557f21bbd297a4d3c1b 491 SUPERFAMILY SSF53223 6 197 9.35E-42 T 12-10-2018 TDE_2446 663119d31aaf1557f21bbd297a4d3c1b 491 SMART SM01274 37 186 1.8E-46 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TDE_1122 885aa8c2f5b4558593df5a7ef3ad1479 112 Gene3D G3DSA:3.30.750.24 1 112 8.5E-26 T 12-10-2018 IPR036513 STAS domain superfamily TDE_1122 885aa8c2f5b4558593df5a7ef3ad1479 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 1.9E-28 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TDE_1122 885aa8c2f5b4558593df5a7ef3ad1479 112 Pfam PF01740 STAS domain 4 106 1.7E-18 T 12-10-2018 IPR002645 STAS domain TDE_1122 885aa8c2f5b4558593df5a7ef3ad1479 112 SUPERFAMILY SSF52091 1 110 4.91E-27 T 12-10-2018 IPR036513 STAS domain superfamily TDE_1067 ffaeca93ad2d512e4777d69b36310112 385 ProSitePatterns PS00211 ABC transporters family signature. 214 228 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1067 ffaeca93ad2d512e4777d69b36310112 385 Gene3D G3DSA:3.40.50.300 78 384 9.2E-93 T 12-10-2018 TDE_1067 ffaeca93ad2d512e4777d69b36310112 385 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 292 380 1.3E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1067 ffaeca93ad2d512e4777d69b36310112 385 Pfam PF00005 ABC transporter 90 241 8.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1067 ffaeca93ad2d512e4777d69b36310112 385 SUPERFAMILY SSF52540 97 379 1.89E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1067 ffaeca93ad2d512e4777d69b36310112 385 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 293 360 1.6E-14 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1067 ffaeca93ad2d512e4777d69b36310112 385 SMART SM00382 97 291 8.7E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0216 2e7ee677ff03f26031aee79e84822b84 411 Gene3D G3DSA:3.40.50.150 153 336 2.4E-14 T 12-10-2018 TDE_0216 2e7ee677ff03f26031aee79e84822b84 411 Pfam PF13679 Methyltransferase domain 163 304 3.4E-35 T 12-10-2018 IPR025714 Methyltransferase domain TDE_0216 2e7ee677ff03f26031aee79e84822b84 411 SUPERFAMILY SSF53335 161 300 6.63E-16 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1714 00e9dc9b663b11b8a570c175c171864d 337 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 115 328 3.7E-49 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TDE_1714 00e9dc9b663b11b8a570c175c171864d 337 Gene3D G3DSA:3.40.630.40 102 336 1.3E-58 T 12-10-2018 TDE_1714 00e9dc9b663b11b8a570c175c171864d 337 Pfam PF07833 Copper amine oxidase N-terminal domain 27 95 8.8E-8 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal TDE_1714 00e9dc9b663b11b8a570c175c171864d 337 SUPERFAMILY SSF55383 27 93 1.27E-12 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily TDE_1714 00e9dc9b663b11b8a570c175c171864d 337 SUPERFAMILY SSF53187 114 331 4.39E-43 T 12-10-2018 TDE_1714 00e9dc9b663b11b8a570c175c171864d 337 SMART SM00646 183 328 7.4E-30 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TDE_2352 2bd8e2f4c2a75a5e9f5aba630d07e3e5 623 SUPERFAMILY SSF64518 144 620 1.1E-19 T 12-10-2018 TDE_2352 2bd8e2f4c2a75a5e9f5aba630d07e3e5 623 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 573 619 1.8E-9 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TDE_2352 2bd8e2f4c2a75a5e9f5aba630d07e3e5 623 PRINTS PR01005 Flagellar hook-associated protein signature 133 153 9.7E-6 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TDE_2352 2bd8e2f4c2a75a5e9f5aba630d07e3e5 623 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 9.7E-6 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TDE_2352 2bd8e2f4c2a75a5e9f5aba630d07e3e5 623 PRINTS PR01005 Flagellar hook-associated protein signature 166 190 9.7E-6 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TDE_2352 2bd8e2f4c2a75a5e9f5aba630d07e3e5 623 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 342 5.2E-79 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TDE_2202 f1b177c2fb4cb54b63a6d115fd7341a9 296 SUPERFAMILY SSF103481 40 142 5.89E-14 T 12-10-2018 TDE_2202 f1b177c2fb4cb54b63a6d115fd7341a9 296 SUPERFAMILY SSF103481 187 289 1.44E-10 T 12-10-2018 TDE_2202 f1b177c2fb4cb54b63a6d115fd7341a9 296 Pfam PF00892 EamA-like transporter family 149 284 1.8E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_2202 f1b177c2fb4cb54b63a6d115fd7341a9 296 Pfam PF00892 EamA-like transporter family 7 139 1.7E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 SUPERFAMILY SSF52058 1155 1459 2.27E-15 T 12-10-2018 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Pfam PF13306 Leucine rich repeats (6 copies) 1157 1290 4.0E-20 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Pfam PF13306 Leucine rich repeats (6 copies) 663 783 4.0E-25 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Pfam PF13306 Leucine rich repeats (6 copies) 1305 1411 3.0E-20 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Pfam PF13306 Leucine rich repeats (6 copies) 795 923 1.1E-40 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Pfam PF13306 Leucine rich repeats (6 copies) 487 619 2.9E-28 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Pfam PF13306 Leucine rich repeats (6 copies) 933 1046 4.8E-17 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Pfam PF13306 Leucine rich repeats (6 copies) 1056 1146 2.7E-20 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Gene3D G3DSA:3.80.10.10 1344 1491 6.0E-30 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Gene3D G3DSA:3.80.10.10 926 1009 1.3E-13 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Gene3D G3DSA:3.80.10.10 1010 1224 3.0E-50 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Gene3D G3DSA:3.80.10.10 657 847 1.0E-56 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Gene3D G3DSA:3.80.10.10 848 925 1.4E-25 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Gene3D G3DSA:3.80.10.10 1228 1343 3.9E-15 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 SUPERFAMILY SSF52058 483 648 3.2E-11 T 12-10-2018 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 SUPERFAMILY SSF52047 927 1095 2.12E-6 T 12-10-2018 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 SUPERFAMILY SSF52058 1049 1221 3.06E-22 T 12-10-2018 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 SUPERFAMILY SSF52058 631 909 3.16E-33 T 12-10-2018 TDE_1660 fb5927a8306db182ab43a80701af8fc6 1518 Gene3D G3DSA:3.80.10.10 464 656 1.8E-34 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 SMART SM00460 434 505 2.5E-19 T 12-10-2018 IPR002931 Transglutaminase-like TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 Gene3D G3DSA:1.25.40.10 848 980 2.4E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 SUPERFAMILY SSF48452 804 939 3.41E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 Pfam PF13181 Tetratricopeptide repeat 809 836 0.001 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 SUPERFAMILY SSF48452 670 837 1.79E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 Gene3D G3DSA:3.10.620.30 372 522 1.9E-18 T 12-10-2018 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 Pfam PF01841 Transglutaminase-like superfamily 387 503 1.5E-22 T 12-10-2018 IPR002931 Transglutaminase-like TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 Gene3D G3DSA:1.25.40.10 669 845 2.3E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 SUPERFAMILY SSF54001 309 613 5.33E-42 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 SMART SM00028 848 881 57.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 SMART SM00028 740 773 160.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 SMART SM00028 672 705 430.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 SMART SM00028 706 739 2.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0581 ae566c4e70b4914fb2ed6bd64ab27a18 1238 SMART SM00028 808 841 8.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0339 17522130fe07cc2cafc9fd5cc5131290 205 SUPERFAMILY SSF46689 3 76 5.13E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_0339 17522130fe07cc2cafc9fd5cc5131290 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.0E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0339 17522130fe07cc2cafc9fd5cc5131290 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.0E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0339 17522130fe07cc2cafc9fd5cc5131290 205 Gene3D G3DSA:1.10.357.10 2 195 9.6E-26 T 12-10-2018 TDE_0339 17522130fe07cc2cafc9fd5cc5131290 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.6E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_2326 c6ef1f392642c9b13169db1601e07098 286 Pfam PF13500 AAA domain 8 231 6.2E-22 T 12-10-2018 TDE_2326 c6ef1f392642c9b13169db1601e07098 286 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 9 251 1.2E-94 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TDE_2326 c6ef1f392642c9b13169db1601e07098 286 SUPERFAMILY SSF52540 6 233 2.79E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2326 c6ef1f392642c9b13169db1601e07098 286 Gene3D G3DSA:3.40.50.300 6 247 1.1E-54 T 12-10-2018 TDE_2326 c6ef1f392642c9b13169db1601e07098 286 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 286 91.032 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TDE_0098 3fa6a4f2a87e1e113fca3121d707b5b2 239 Pfam PF11738 Protein of unknown function (DUF3298) 153 235 5.5E-10 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 TDE_0098 3fa6a4f2a87e1e113fca3121d707b5b2 239 Pfam PF13739 Domain of unknown function (DUF4163) 51 135 1.8E-13 T 12-10-2018 IPR025303 Deacetylase PdaC TDE_0098 3fa6a4f2a87e1e113fca3121d707b5b2 239 Gene3D G3DSA:3.30.565.40 36 149 1.9E-15 T 12-10-2018 TDE_0098 3fa6a4f2a87e1e113fca3121d707b5b2 239 Gene3D G3DSA:3.90.640.20 152 239 4.4E-12 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily TDE_0475 86ae3032b50f11c3da28c850ad87004f 351 SUPERFAMILY SSF52540 116 314 2.62E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0475 86ae3032b50f11c3da28c850ad87004f 351 Gene3D G3DSA:3.40.50.300 87 346 1.8E-26 T 12-10-2018 TDE_0475 86ae3032b50f11c3da28c850ad87004f 351 ProSitePatterns PS00211 ABC transporters family signature. 238 252 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0475 86ae3032b50f11c3da28c850ad87004f 351 Pfam PF00005 ABC transporter 120 265 8.8E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0475 86ae3032b50f11c3da28c850ad87004f 351 SMART SM00382 124 309 5.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 SMART SM00962 101 295 3.6E-109 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 Pfam PF02881 SRP54-type protein, helical bundle domain 6 82 9.3E-19 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 Gene3D G3DSA:3.40.50.300 90 284 1.8E-121 T 12-10-2018 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 437 32.815 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 Pfam PF02978 Signal peptide binding domain 327 423 2.6E-29 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 Pfam PF00448 SRP54-type protein, GTPase domain 102 295 1.9E-74 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 SMART SM00382 100 246 3.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 SUPERFAMILY SSF47446 297 426 3.01E-42 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 SMART SM00963 1 86 1.8E-29 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 425 3.2E-175 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 Gene3D G3DSA:1.20.120.140 5 305 1.8E-121 T 12-10-2018 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 SUPERFAMILY SSF47364 1 93 2.09E-24 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 Gene3D G3DSA:1.10.260.30 310 439 2.4E-36 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TDE_2089 1faf4f4d38fa752399bb7e60e6111079 443 SUPERFAMILY SSF52540 101 297 1.26E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0952 7cd08536e9fac0eb528802e0777d7c03 514 SUPERFAMILY SSF52540 298 500 3.37E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0952 7cd08536e9fac0eb528802e0777d7c03 514 Gene3D G3DSA:3.40.50.300 6 250 1.4E-43 T 12-10-2018 TDE_0952 7cd08536e9fac0eb528802e0777d7c03 514 SMART SM00382 40 230 1.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0952 7cd08536e9fac0eb528802e0777d7c03 514 Gene3D G3DSA:3.40.50.300 288 514 7.4E-22 T 12-10-2018 TDE_0952 7cd08536e9fac0eb528802e0777d7c03 514 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0952 7cd08536e9fac0eb528802e0777d7c03 514 Pfam PF00005 ABC transporter 299 462 9.1E-9 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0952 7cd08536e9fac0eb528802e0777d7c03 514 Pfam PF00005 ABC transporter 31 180 1.9E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0952 7cd08536e9fac0eb528802e0777d7c03 514 SUPERFAMILY SSF52540 28 240 1.7E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0808 518fadc6f98c5e0238077422b31455e5 156 Gene3D G3DSA:3.40.630.30 54 155 1.1E-17 T 12-10-2018 TDE_0808 518fadc6f98c5e0238077422b31455e5 156 Pfam PF00583 Acetyltransferase (GNAT) family 48 140 6.1E-9 T 12-10-2018 IPR000182 GNAT domain TDE_0808 518fadc6f98c5e0238077422b31455e5 156 SUPERFAMILY SSF55729 10 146 2.06E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_0023 4eba1bfefd7e2e5984773d4f4f404cf6 298 Pfam PF00583 Acetyltransferase (GNAT) family 202 287 4.5E-8 T 12-10-2018 IPR000182 GNAT domain TDE_0023 4eba1bfefd7e2e5984773d4f4f404cf6 298 Gene3D G3DSA:3.40.630.30 164 292 5.6E-14 T 12-10-2018 TDE_0023 4eba1bfefd7e2e5984773d4f4f404cf6 298 SUPERFAMILY SSF55729 159 296 4.08E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_0011 e53426bddeb81ca192f98a367064c58a 215 Pfam PF00578 AhpC/TSA family 12 139 2.4E-26 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TDE_0011 e53426bddeb81ca192f98a367064c58a 215 Gene3D G3DSA:3.30.1020.10 150 215 7.1E-27 T 12-10-2018 TDE_0011 e53426bddeb81ca192f98a367064c58a 215 Gene3D G3DSA:3.40.30.10 10 149 1.5E-40 T 12-10-2018 TDE_0011 e53426bddeb81ca192f98a367064c58a 215 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 202 3.4E-12 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TDE_0011 e53426bddeb81ca192f98a367064c58a 215 PIRSF PIRSF000239 4 214 1.2E-71 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TDE_0011 e53426bddeb81ca192f98a367064c58a 215 SUPERFAMILY SSF52833 6 211 3.42E-61 T 12-10-2018 IPR036249 Thioredoxin-like superfamily TDE_0011 e53426bddeb81ca192f98a367064c58a 215 Hamap MF_00401 Peroxiredoxin. 9 215 47.378 T 12-10-2018 IPR022915 Peroxiredoxin, TDXH subfamily GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TDE_1675 f9eedc535dec3d407981d6aee9cf1eeb 199 Gene3D G3DSA:3.40.5.10 1 61 4.9E-22 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1675 f9eedc535dec3d407981d6aee9cf1eeb 199 SUPERFAMILY SSF55653 61 147 1.29E-19 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TDE_1675 f9eedc535dec3d407981d6aee9cf1eeb 199 SUPERFAMILY SSF55658 1 57 9.07E-17 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal TDE_1675 f9eedc535dec3d407981d6aee9cf1eeb 199 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 22.852 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1675 f9eedc535dec3d407981d6aee9cf1eeb 199 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1675 f9eedc535dec3d407981d6aee9cf1eeb 199 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.6E-41 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1675 f9eedc535dec3d407981d6aee9cf1eeb 199 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 1.4E-19 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal TDE_1675 f9eedc535dec3d407981d6aee9cf1eeb 199 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.3E-20 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1675 f9eedc535dec3d407981d6aee9cf1eeb 199 Gene3D G3DSA:3.10.430.100 62 148 3.7E-19 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 Hamap MF_00235 Adenylate kinase [adk]. 1 208 44.942 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 Gene3D G3DSA:3.40.50.300 1 208 1.4E-76 T 12-10-2018 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 PRINTS PR00094 Adenylate kinase signature 32 46 6.6E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 PRINTS PR00094 Adenylate kinase signature 81 97 6.6E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 PRINTS PR00094 Adenylate kinase signature 155 170 6.6E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 PRINTS PR00094 Adenylate kinase signature 4 17 6.6E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 PRINTS PR00094 Adenylate kinase signature 172 186 6.6E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 Pfam PF00406 Adenylate kinase 6 185 8.2E-55 T 12-10-2018 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 SUPERFAMILY SSF52540 2 192 4.9E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 TIGRFAM TIGR01351 adk: adenylate kinase 3 203 2.2E-76 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TDE_1112 89f74f5f1e9319ceed2eb6caf711cc44 209 Pfam PF05191 Adenylate kinase, active site lid 122 157 4.5E-15 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TDE_1084 b1dea06331cd0dacfe58a6882d873c99 450 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 146 161 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 TDE_1084 b1dea06331cd0dacfe58a6882d873c99 450 PIRSF PIRSF001563 1 447 6.0E-102 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TDE_1084 b1dea06331cd0dacfe58a6882d873c99 450 Gene3D G3DSA:3.40.1190.10 1 306 1.0E-84 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_1084 b1dea06331cd0dacfe58a6882d873c99 450 SUPERFAMILY SSF53244 307 441 3.43E-18 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_1084 b1dea06331cd0dacfe58a6882d873c99 450 Pfam PF08245 Mur ligase middle domain 49 285 1.7E-11 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TDE_1084 b1dea06331cd0dacfe58a6882d873c99 450 Gene3D G3DSA:3.90.190.20 310 444 1.0E-21 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_1084 b1dea06331cd0dacfe58a6882d873c99 450 SUPERFAMILY SSF53623 7 306 9.46E-77 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_1084 b1dea06331cd0dacfe58a6882d873c99 450 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 442 2.7E-102 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TDE_1882 61d89f194c916492c658c7c963662f18 427 SUPERFAMILY SSF51445 3 415 4.9E-112 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_1882 61d89f194c916492c658c7c963662f18 427 Gene3D G3DSA:3.20.20.80 1 424 4.8E-113 T 12-10-2018 TDE_1882 61d89f194c916492c658c7c963662f18 427 Pfam PF00232 Glycosyl hydrolase family 1 4 409 1.1E-79 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TDE_1882 61d89f194c916492c658c7c963662f18 427 PRINTS PR00131 Glycosyl hydrolase family 1 signature 355 372 1.8E-10 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TDE_1882 61d89f194c916492c658c7c963662f18 427 PRINTS PR00131 Glycosyl hydrolase family 1 signature 379 391 1.8E-10 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TDE_1882 61d89f194c916492c658c7c963662f18 427 PRINTS PR00131 Glycosyl hydrolase family 1 signature 271 285 1.8E-10 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TDE_1882 61d89f194c916492c658c7c963662f18 427 PRINTS PR00131 Glycosyl hydrolase family 1 signature 325 333 1.8E-10 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TDE_1682 6f7f8998f24f230fd0eff3f2154f23f7 431 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 71 9.4E-9 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1682 6f7f8998f24f230fd0eff3f2154f23f7 431 SUPERFAMILY SSF52540 75 334 5.69E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1682 6f7f8998f24f230fd0eff3f2154f23f7 431 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 319 8.7E-44 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1682 6f7f8998f24f230fd0eff3f2154f23f7 431 Gene3D G3DSA:3.40.50.12240 1 431 7.5E-108 T 12-10-2018 TDE_1682 6f7f8998f24f230fd0eff3f2154f23f7 431 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 431 45.077 T 12-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TDE_2520 0c98cd48c2f4ed039f51d54c866e5569 426 Gene3D G3DSA:2.40.70.10 293 424 3.3E-12 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily TDE_2520 0c98cd48c2f4ed039f51d54c866e5569 426 Gene3D G3DSA:2.40.70.10 139 286 3.5E-15 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily TDE_2520 0c98cd48c2f4ed039f51d54c866e5569 426 SUPERFAMILY SSF50630 303 411 1.97E-12 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily TDE_2520 0c98cd48c2f4ed039f51d54c866e5569 426 SUPERFAMILY SSF50630 156 272 5.35E-12 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily TDE_2520 0c98cd48c2f4ed039f51d54c866e5569 426 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 177 188 - T 12-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 TDE_2520 0c98cd48c2f4ed039f51d54c866e5569 426 Pfam PF13650 Aspartyl protease 166 262 1.0E-8 T 12-10-2018 TDE_2520 0c98cd48c2f4ed039f51d54c866e5569 426 Pfam PF13650 Aspartyl protease 312 407 4.1E-10 T 12-10-2018 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 SUPERFAMILY SSF52540 164 467 2.61E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Pfam PF07724 AAA domain (Cdc48 subfamily) 539 711 1.5E-49 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 SMART SM00382 203 348 2.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 SMART SM00382 540 690 8.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Gene3D G3DSA:3.40.50.300 153 346 1.5E-67 T 12-10-2018 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Gene3D G3DSA:3.40.50.300 492 716 5.2E-80 T 12-10-2018 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 SUPERFAMILY SSF52540 489 797 5.16E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 208 320 2.2E-14 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 718 796 3.5E-23 T 12-10-2018 IPR019489 Clp ATPase, C-terminal TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 SMART SM01086 718 809 1.9E-29 T 12-10-2018 IPR019489 Clp ATPase, C-terminal TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 66 4.3E-5 T 12-10-2018 IPR004176 Clp, N-terminal TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 144 3.6E-7 T 12-10-2018 IPR004176 Clp, N-terminal TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Gene3D G3DSA:1.10.8.60 349 484 1.7E-36 T 12-10-2018 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Gene3D G3DSA:4.10.860.10 412 470 1.7E-36 T 12-10-2018 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Pfam PF02151 UvrB/uvrC motif 421 454 8.2E-5 T 12-10-2018 IPR001943 UVR domain GO:0005515 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 SUPERFAMILY SSF81923 17 139 1.7E-15 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 589 607 1.2E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 665 1.2E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 544 562 1.2E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 618 636 1.2E-38 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 298 310 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Gene3D G3DSA:1.10.8.60 718 820 5.7E-25 T 12-10-2018 TDE_2036 73af89d6fcb4f03a5a25a29423cc91ac 832 Gene3D G3DSA:1.10.1780.10 5 150 1.4E-21 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TDE_2478 eb844885d4158197060323316e3d29a5 652 Gene3D G3DSA:3.30.420.340 422 586 4.5E-52 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily TDE_2478 eb844885d4158197060323316e3d29a5 652 Hamap MF_00203 UvrABC system protein C [uvrC]. 7 644 27.164 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TDE_2478 eb844885d4158197060323316e3d29a5 652 SMART SM00465 20 100 6.7E-23 T 12-10-2018 IPR000305 GIY-YIG endonuclease TDE_2478 eb844885d4158197060323316e3d29a5 652 Pfam PF02151 UvrB/uvrC motif 208 235 3.3E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 TDE_2478 eb844885d4158197060323316e3d29a5 652 SUPERFAMILY SSF47781 556 647 1.59E-13 T 12-10-2018 IPR010994 RuvA domain 2-like TDE_2478 eb844885d4158197060323316e3d29a5 652 Pfam PF01541 GIY-YIG catalytic domain 21 95 3.5E-11 T 12-10-2018 IPR000305 GIY-YIG endonuclease TDE_2478 eb844885d4158197060323316e3d29a5 652 SUPERFAMILY SSF46600 190 235 1.12E-10 T 12-10-2018 IPR036876 UVR domain superfamily TDE_2478 eb844885d4158197060323316e3d29a5 652 Gene3D G3DSA:3.40.1440.10 6 104 3.0E-33 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TDE_2478 eb844885d4158197060323316e3d29a5 652 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 343 1.3E-111 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TDE_2478 eb844885d4158197060323316e3d29a5 652 Gene3D G3DSA:1.10.150.20 587 652 1.2E-8 T 12-10-2018 TDE_2478 eb844885d4158197060323316e3d29a5 652 SUPERFAMILY SSF82771 20 102 5.1E-22 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TDE_2478 eb844885d4158197060323316e3d29a5 652 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 429 578 9.5E-49 T 12-10-2018 IPR001162 UvrC family homology region TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 SUPERFAMILY SSF55681 116 421 3.51E-84 T 12-10-2018 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 6.3E-153 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 38.552 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 PIRSF PIRSF001529 1 421 1.3E-151 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 6.1E-24 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 399 3.5E-31 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 2.0E-26 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 2.0E-26 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 2.0E-26 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 2.0E-26 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 2.0E-26 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 SUPERFAMILY SSF46589 1 111 2.46E-24 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 Gene3D G3DSA:1.10.287.40 1 103 5.8E-24 T 12-10-2018 TDE_2307 62b20882e60b9aa5ab39295f3020fc30 422 Gene3D G3DSA:3.30.930.10 104 422 3.4E-129 T 12-10-2018 TDE_1964 80914419e0c4d0a770dacbbb60ec15bd 549 Gene3D G3DSA:1.20.58.220 336 547 1.0E-6 T 12-10-2018 IPR038078 PhoU-like domain superfamily TDE_1964 80914419e0c4d0a770dacbbb60ec15bd 549 Pfam PF01895 PhoU domain 351 436 8.3E-7 T 12-10-2018 IPR026022 PhoU domain TDE_1964 80914419e0c4d0a770dacbbb60ec15bd 549 Pfam PF01895 PhoU domain 488 544 8.9E-5 T 12-10-2018 IPR026022 PhoU domain TDE_1964 80914419e0c4d0a770dacbbb60ec15bd 549 SUPERFAMILY SSF109755 349 544 8.69E-21 T 12-10-2018 TDE_1964 80914419e0c4d0a770dacbbb60ec15bd 549 Pfam PF02690 Na+/Pi-cotransporter 179 259 1.9E-10 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TDE_1964 80914419e0c4d0a770dacbbb60ec15bd 549 Pfam PF02690 Na+/Pi-cotransporter 16 155 4.7E-47 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TDE_1964 80914419e0c4d0a770dacbbb60ec15bd 549 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 319 2.4E-101 T 12-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 PIRSF PIRSF006356 1 409 4.5E-180 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 Pfam PF02274 Amidinotransferase 18 406 2.1E-94 T 12-10-2018 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 Gene3D G3DSA:3.75.10.10 5 404 1.5E-153 T 12-10-2018 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 Gene3D G3DSA:1.10.3930.10 68 153 1.5E-153 T 12-10-2018 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.7E-56 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 PRINTS PR01466 Bacterial arginine deiminase signature 365 379 2.7E-56 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 PRINTS PR01466 Bacterial arginine deiminase signature 153 171 2.7E-56 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 PRINTS PR01466 Bacterial arginine deiminase signature 181 196 2.7E-56 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 PRINTS PR01466 Bacterial arginine deiminase signature 388 406 2.7E-56 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 PRINTS PR01466 Bacterial arginine deiminase signature 345 362 2.7E-56 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 TIGRFAM TIGR01078 arcA: arginine deiminase 4 409 1.3E-157 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 SUPERFAMILY SSF55909 2 409 1.94E-133 T 12-10-2018 TDE_0451 0e4f5d4c8bf17fe4f395ba8de92ffc25 410 Hamap MF_00242 Arginine deiminase [arcA]. 1 409 43.901 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 TDE_0482 1131812343f82433c23257b4cb34dacd 72 SUPERFAMILY SSF54786 18 71 2.2E-9 T 12-10-2018 TDE_0482 1131812343f82433c23257b4cb34dacd 72 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 21 71 6.1E-9 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TDE_0482 1131812343f82433c23257b4cb34dacd 72 Gene3D G3DSA:3.30.920.30 15 72 2.4E-7 T 12-10-2018 IPR038570 HicA superfamily TDE_2374 4f13d085d275efcb8c077becb3e110c0 187 Pfam PF03602 Conserved hypothetical protein 95 33 132 1.9E-8 T 12-10-2018 TDE_2374 4f13d085d275efcb8c077becb3e110c0 187 Gene3D G3DSA:3.40.50.150 1 187 1.1E-51 T 12-10-2018 TDE_2374 4f13d085d275efcb8c077becb3e110c0 187 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 15 137 1.0E-29 T 12-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 TDE_2374 4f13d085d275efcb8c077becb3e110c0 187 SUPERFAMILY SSF53335 15 159 2.09E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2374 4f13d085d275efcb8c077becb3e110c0 187 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 37 64 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 TDE_2734 8388b05f357974034cbe088b5edac81b 236 Gene3D G3DSA:2.70.50.70 22 225 1.1E-45 T 12-10-2018 TDE_2734 8388b05f357974034cbe088b5edac81b 236 Pfam PF14848 DNA-binding domain 1 122 9.5E-42 T 12-10-2018 TDE_2734 8388b05f357974034cbe088b5edac81b 236 Gene3D G3DSA:4.10.520.10 25 114 1.1E-45 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TDE_2734 8388b05f357974034cbe088b5edac81b 236 Pfam PF14734 Domain of unknown function (DUF4469) with IG-like fold 130 226 3.0E-30 T 12-10-2018 IPR027824 Domain of unknown function DUF4469 with IG-like fold TDE_2391 42e8f365d8491862bea3796b30005c74 322 Gene3D G3DSA:2.40.100.10 14 164 7.2E-61 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily TDE_2391 42e8f365d8491862bea3796b30005c74 322 SUPERFAMILY SSF50891 17 158 5.7E-55 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily TDE_2391 42e8f365d8491862bea3796b30005c74 322 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 TDE_2391 42e8f365d8491862bea3796b30005c74 322 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 1.9E-32 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TDE_2391 42e8f365d8491862bea3796b30005c74 322 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 1.9E-32 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TDE_2391 42e8f365d8491862bea3796b30005c74 322 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 1.9E-32 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TDE_2391 42e8f365d8491862bea3796b30005c74 322 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 1.9E-32 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TDE_2391 42e8f365d8491862bea3796b30005c74 322 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 30 45 1.9E-32 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TDE_2391 42e8f365d8491862bea3796b30005c74 322 SUPERFAMILY SSF54534 118 322 2.04E-39 T 12-10-2018 TDE_2391 42e8f365d8491862bea3796b30005c74 322 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 164 1.5E-46 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TDE_2391 42e8f365d8491862bea3796b30005c74 322 Gene3D G3DSA:3.10.50.40 172 322 2.0E-38 T 12-10-2018 TDE_2391 42e8f365d8491862bea3796b30005c74 322 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 230 319 7.3E-28 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TDE_1333 c35bb1d77dd8f011f5b2ecab69cdbe49 354 Pfam PF01145 SPFH domain / Band 7 family 59 259 8.4E-22 T 12-10-2018 IPR001107 Band 7 domain TDE_1333 c35bb1d77dd8f011f5b2ecab69cdbe49 354 TIGRFAM TIGR01932 hflC: HflC protein 43 352 1.7E-105 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TDE_1333 c35bb1d77dd8f011f5b2ecab69cdbe49 354 SMART SM00244 55 258 9.7E-25 T 12-10-2018 IPR001107 Band 7 domain TDE_1333 c35bb1d77dd8f011f5b2ecab69cdbe49 354 SUPERFAMILY SSF117892 87 258 1.12E-16 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily TDE_1333 c35bb1d77dd8f011f5b2ecab69cdbe49 354 PIRSF PIRSF005651 27 354 1.9E-95 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TDE_0481 29ac1b32a8d3660a0e3770ef7ad550e4 113 SUPERFAMILY SSF47598 76 112 4.17E-9 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TDE_0481 29ac1b32a8d3660a0e3770ef7ad550e4 113 Pfam PF05534 HicB family 64 112 2.4E-19 T 12-10-2018 IPR008651 Uncharacterised protein family HicB TDE_0481 29ac1b32a8d3660a0e3770ef7ad550e4 113 Gene3D G3DSA:1.10.1220.10 82 113 8.9E-6 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TDE_0481 29ac1b32a8d3660a0e3770ef7ad550e4 113 SUPERFAMILY SSF143100 3 77 3.14E-18 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like TDE_0481 29ac1b32a8d3660a0e3770ef7ad550e4 113 Gene3D G3DSA:3.30.160.250 10 81 2.7E-14 T 12-10-2018 TDE_0471 f5e36d9292a3d67d274dedb26669949e 543 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 47 114 7.1E-10 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat TDE_0471 f5e36d9292a3d67d274dedb26669949e 543 Gene3D G3DSA:3.10.20.660 43 119 2.9E-13 T 12-10-2018 TDE_0471 f5e36d9292a3d67d274dedb26669949e 543 Pfam PF13088 BNR repeat-like domain 173 386 1.3E-7 T 12-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 TDE_0471 f5e36d9292a3d67d274dedb26669949e 543 SUPERFAMILY SSF50939 123 499 4.49E-53 T 12-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 TDE_0471 f5e36d9292a3d67d274dedb26669949e 543 Gene3D G3DSA:2.120.10.10 122 502 7.2E-70 T 12-10-2018 TDE_0707 50cc23367e23fd81052867d0125ad482 771 Pfam PF07690 Major Facilitator Superfamily 25 374 2.2E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TDE_0707 50cc23367e23fd81052867d0125ad482 771 SUPERFAMILY SSF103473 31 448 2.22E-27 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_0707 50cc23367e23fd81052867d0125ad482 771 Gene3D G3DSA:1.20.1250.20 18 450 9.5E-14 T 12-10-2018 TDE_0707 50cc23367e23fd81052867d0125ad482 771 Gene3D G3DSA:1.25.10.10 465 660 5.1E-11 T 12-10-2018 IPR011989 Armadillo-like helical TDE_0707 50cc23367e23fd81052867d0125ad482 771 SUPERFAMILY SSF48371 463 640 2.35E-10 T 12-10-2018 IPR016024 Armadillo-type fold TDE_2466 ff940c6023c5e4f1acb8f23cbf1b063c 69 Pfam PF01206 Sulfurtransferase TusA 5 69 5.4E-16 T 12-10-2018 IPR001455 TusA-like domain TDE_2466 ff940c6023c5e4f1acb8f23cbf1b063c 69 SUPERFAMILY SSF64307 3 69 1.26E-14 T 12-10-2018 IPR036868 TusA-like domain superfamily TDE_2466 ff940c6023c5e4f1acb8f23cbf1b063c 69 Gene3D G3DSA:3.30.110.40 3 69 5.0E-19 T 12-10-2018 IPR036868 TusA-like domain superfamily TDE_1158 68d2cca5e9a7a9c33218aad7ad991920 203 Pfam PF03592 Terminase small subunit 26 175 5.7E-12 T 12-10-2018 IPR005335 Terminase small subunit GO:0006323 TDE_0187 c5ef51a713d806a4fbd4319f52e2c41c 255 SUPERFAMILY SSF53474 17 254 1.14E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0187 c5ef51a713d806a4fbd4319f52e2c41c 255 Gene3D G3DSA:3.40.50.1820 11 255 1.6E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0187 c5ef51a713d806a4fbd4319f52e2c41c 255 PIRSF PIRSF017388 9 255 5.8E-64 T 12-10-2018 IPR012354 Esterase/lipase GO:0052689 TDE_0187 c5ef51a713d806a4fbd4319f52e2c41c 255 Pfam PF12146 Serine aminopeptidase, S33 26 168 4.9E-11 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 TDE_1101 b51e8d332c5ec4e8650901e023e46f0f 159 SUPERFAMILY SSF55729 5 136 2.84E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_1101 b51e8d332c5ec4e8650901e023e46f0f 159 Pfam PF00583 Acetyltransferase (GNAT) family 17 122 3.3E-12 T 12-10-2018 IPR000182 GNAT domain TDE_1101 b51e8d332c5ec4e8650901e023e46f0f 159 Gene3D G3DSA:3.40.630.30 2 141 1.4E-19 T 12-10-2018 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 SUPERFAMILY SSF103190 96 187 1.23E-9 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 Gene3D G3DSA:1.10.287.950 312 426 1.5E-10 T 12-10-2018 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 SUPERFAMILY SSF58104 334 435 1.28E-8 T 12-10-2018 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 SMART SM00304 312 366 7.5E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 SUPERFAMILY SSF58104 415 653 1.05E-45 T 12-10-2018 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 Pfam PF00672 HAMP domain 313 360 1.6E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 SMART SM00283 409 656 2.5E-66 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 Gene3D G3DSA:1.10.287.950 434 653 2.2E-42 T 12-10-2018 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 1.5E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 507 534 1.5E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 536 565 1.5E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 584 613 1.5E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 Pfam PF02743 Cache domain 40 274 3.2E-27 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 476 624 9.9E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2549 4cd955fd39a73253234eeb8b590f844a 699 Gene3D G3DSA:3.30.450.20 147 293 3.4E-24 T 12-10-2018 TDE_1976 ec2a67e0376d2b65f185151ba7d21d55 287 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 236 8.9E-74 T 12-10-2018 TDE_1976 ec2a67e0376d2b65f185151ba7d21d55 287 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 287 2.8E-46 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_1579 789c1819edf093213f566741c31b5de7 471 Pfam PF05670 Domain of unknown function (DUF814) 347 434 1.7E-19 T 12-10-2018 IPR008532 Domain of unknown function DUF814 TDE_1579 789c1819edf093213f566741c31b5de7 471 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 165 327 6.4E-24 T 12-10-2018 TDE_1579 789c1819edf093213f566741c31b5de7 471 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 14 140 3.1E-21 T 12-10-2018 TDE_1579 789c1819edf093213f566741c31b5de7 471 Gene3D G3DSA:2.30.310.10 1 144 2.4E-22 T 12-10-2018 TDE_2683 67f172aa70195fd76d31d6169f570704 262 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 31 255 1.0E-88 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TDE_2683 67f172aa70195fd76d31d6169f570704 262 Gene3D G3DSA:1.20.140.160 101 257 6.5E-48 T 12-10-2018 TDE_2683 67f172aa70195fd76d31d6169f570704 262 SUPERFAMILY SSF88659 166 256 6.54E-23 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_2683 67f172aa70195fd76d31d6169f570704 262 SUPERFAMILY SSF88659 103 180 6.1E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_2683 67f172aa70195fd76d31d6169f570704 262 Pfam PF04542 Sigma-70 region 2 31 102 2.9E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TDE_2683 67f172aa70195fd76d31d6169f570704 262 Gene3D G3DSA:1.10.1740.10 15 100 5.2E-30 T 12-10-2018 TDE_2683 67f172aa70195fd76d31d6169f570704 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 254 5.2E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TDE_2683 67f172aa70195fd76d31d6169f570704 262 Pfam PF04545 Sigma-70, region 4 203 251 1.5E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TDE_2683 67f172aa70195fd76d31d6169f570704 262 PRINTS PR00046 Major sigma-70 factor signature 239 250 4.5E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_2683 67f172aa70195fd76d31d6169f570704 262 PRINTS PR00046 Major sigma-70 factor signature 57 70 4.5E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_2683 67f172aa70195fd76d31d6169f570704 262 PRINTS PR00046 Major sigma-70 factor signature 224 239 4.5E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_2683 67f172aa70195fd76d31d6169f570704 262 PRINTS PR00046 Major sigma-70 factor signature 207 219 4.5E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_2683 67f172aa70195fd76d31d6169f570704 262 SUPERFAMILY SSF88946 8 102 1.0E-25 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TDE_2683 67f172aa70195fd76d31d6169f570704 262 Pfam PF04539 Sigma-70 region 3 110 182 1.4E-8 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TDE_2683 67f172aa70195fd76d31d6169f570704 262 PIRSF PIRSF000770 11 261 1.2E-54 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0903 4afe0e7d96dfbd7958deb357b357d60b 662 SUPERFAMILY SSF52540 2 636 3.76E-164 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0903 4afe0e7d96dfbd7958deb357b357d60b 662 Gene3D G3DSA:3.40.50.300 268 627 2.2E-117 T 12-10-2018 TDE_0903 4afe0e7d96dfbd7958deb357b357d60b 662 Gene3D G3DSA:1.10.486.10 371 540 2.2E-117 T 12-10-2018 TDE_0903 4afe0e7d96dfbd7958deb357b357d60b 662 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 123 3.4E-36 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TDE_0903 4afe0e7d96dfbd7958deb357b357d60b 662 Pfam PF00580 UvrD/REP helicase N-terminal domain 154 260 3.4E-38 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TDE_0903 4afe0e7d96dfbd7958deb357b357d60b 662 Gene3D G3DSA:3.40.50.300 8 261 1.4E-89 T 12-10-2018 TDE_0903 4afe0e7d96dfbd7958deb357b357d60b 662 Pfam PF13361 UvrD-like helicase C-terminal domain 265 610 2.4E-71 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TDE_0903 4afe0e7d96dfbd7958deb357b357d60b 662 Gene3D G3DSA:1.10.10.160 108 179 1.4E-89 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily TDE_1742 49a25016610cdf0e006b8a8a4f59c968 641 Pfam PF00501 AMP-binding enzyme 14 510 3.2E-102 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TDE_1742 49a25016610cdf0e006b8a8a4f59c968 641 Gene3D G3DSA:3.40.50.12780 2 316 9.7E-46 T 12-10-2018 TDE_1742 49a25016610cdf0e006b8a8a4f59c968 641 Gene3D G3DSA:3.40.50.12780 351 505 6.9E-36 T 12-10-2018 TDE_1742 49a25016610cdf0e006b8a8a4f59c968 641 SUPERFAMILY SSF56801 8 639 1.31E-105 T 12-10-2018 TDE_1742 49a25016610cdf0e006b8a8a4f59c968 641 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 12-10-2018 IPR020845 AMP-binding, conserved site TDE_1968 e99278ef24202b256c1067ec5d65f42b 199 PIRSF PIRSF005461 1 199 1.3E-66 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TDE_1968 e99278ef24202b256c1067ec5d65f42b 199 Gene3D G3DSA:3.40.50.150 20 199 5.2E-50 T 12-10-2018 TDE_1968 e99278ef24202b256c1067ec5d65f42b 199 Pfam PF01728 FtsJ-like methyltransferase 21 197 1.6E-47 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TDE_1968 e99278ef24202b256c1067ec5d65f42b 199 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 5 198 25.008 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TDE_1968 e99278ef24202b256c1067ec5d65f42b 199 SUPERFAMILY SSF53335 20 199 7.57E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1390 f7d37d35a0fe5842bf80e6b8f7900c5b 428 Pfam PF10531 SLBB domain 277 324 1.4E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TDE_1390 f7d37d35a0fe5842bf80e6b8f7900c5b 428 Pfam PF13375 RnfC Barrel sandwich hybrid domain 27 99 2.2E-6 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain TDE_1390 f7d37d35a0fe5842bf80e6b8f7900c5b 428 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 356 367 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_1390 f7d37d35a0fe5842bf80e6b8f7900c5b 428 SUPERFAMILY SSF46548 323 423 1.96E-12 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_1390 f7d37d35a0fe5842bf80e6b8f7900c5b 428 SUPERFAMILY SSF142984 277 333 6.54E-6 T 12-10-2018 TDE_1390 f7d37d35a0fe5842bf80e6b8f7900c5b 428 Gene3D G3DSA:1.10.1060.10 343 423 7.5E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 325 1.9E-131 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 SUPERFAMILY SSF103039 45 230 3.66E-26 T 12-10-2018 IPR028976 CheC-like superfamily TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 1.6E-34 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.6E-34 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 1.6E-34 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.6E-34 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 Gene3D G3DSA:2.30.330.10 243 329 1.1E-7 T 12-10-2018 IPR036429 SpoA-like superfamily TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 SUPERFAMILY SSF101801 250 326 5.23E-15 T 12-10-2018 IPR036429 SpoA-like superfamily TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 Pfam PF02154 Flagellar motor switch protein FliM 39 229 4.8E-83 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 Gene3D G3DSA:3.40.1550.10 45 232 4.9E-65 T 12-10-2018 IPR028976 CheC-like superfamily TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 PIRSF PIRSF002888 1 333 6.9E-115 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TDE_2763 bcd1e2ff89619970f10022074d1a4d6c 344 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 324 2.2E-20 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) TDE_1986 e0fd1829e415788c58b90bb5954d4b4b 636 SUPERFAMILY SSF158472 318 366 1.83E-7 T 12-10-2018 TDE_1986 e0fd1829e415788c58b90bb5954d4b4b 636 Gene3D G3DSA:1.10.8.500 316 367 6.3E-9 T 12-10-2018 TDE_1986 e0fd1829e415788c58b90bb5954d4b4b 636 SMART SM00044 365 566 2.3E-36 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_1986 e0fd1829e415788c58b90bb5954d4b4b 636 Gene3D G3DSA:3.30.70.1230 387 593 2.7E-70 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_1986 e0fd1829e415788c58b90bb5954d4b4b 636 Gene3D G3DSA:3.30.450.20 189 293 5.0E-7 T 12-10-2018 TDE_1986 e0fd1829e415788c58b90bb5954d4b4b 636 Pfam PF00672 HAMP domain 317 362 2.4E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_1986 e0fd1829e415788c58b90bb5954d4b4b 636 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 396 577 2.8E-38 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_1986 e0fd1829e415788c58b90bb5954d4b4b 636 SMART SM00304 317 369 2.6E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_1986 e0fd1829e415788c58b90bb5954d4b4b 636 SUPERFAMILY SSF55073 393 583 1.07E-60 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_1197 50458b68f0be0dddd0b59bc5e66a7f27 144 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 144 41.714 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TDE_1197 50458b68f0be0dddd0b59bc5e66a7f27 144 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 129 5.0E-71 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TDE_1197 50458b68f0be0dddd0b59bc5e66a7f27 144 SUPERFAMILY SSF89447 2 137 6.06E-40 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily TDE_1197 50458b68f0be0dddd0b59bc5e66a7f27 144 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 141 1.0E-35 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TDE_1197 50458b68f0be0dddd0b59bc5e66a7f27 144 Pfam PF02381 MraZ protein, putative antitoxin-like 2 66 1.3E-15 T 12-10-2018 IPR020603 MraZ domain TDE_1197 50458b68f0be0dddd0b59bc5e66a7f27 144 Pfam PF02381 MraZ protein, putative antitoxin-like 74 138 3.4E-21 T 12-10-2018 IPR020603 MraZ domain TDE_1197 50458b68f0be0dddd0b59bc5e66a7f27 144 Gene3D G3DSA:2.40.330.20 1 143 1.1E-41 T 12-10-2018 IPR038619 MraZ superfamily TDE_0632 1e69341d95e8539a2531e502e9bdc3d6 107 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 8 106 5.3E-16 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TDE_0632 1e69341d95e8539a2531e502e9bdc3d6 107 Gene3D G3DSA:3.30.750.24 1 106 1.9E-20 T 12-10-2018 IPR036513 STAS domain superfamily TDE_0632 1e69341d95e8539a2531e502e9bdc3d6 107 Pfam PF01740 STAS domain 10 105 4.5E-16 T 12-10-2018 IPR002645 STAS domain TDE_0632 1e69341d95e8539a2531e502e9bdc3d6 107 SUPERFAMILY SSF52091 6 106 4.32E-20 T 12-10-2018 IPR036513 STAS domain superfamily TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 SUPERFAMILY SSF48452 669 887 6.26E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 SUPERFAMILY SSF55073 1445 1599 9.42E-44 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 Gene3D G3DSA:3.30.450.40 1622 1774 2.1E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 SUPERFAMILY SSF52540 285 544 3.28E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 SUPERFAMILY SSF48452 858 1075 9.1E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 Gene3D G3DSA:1.25.40.10 660 1097 2.6E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1440 1595 6.6E-44 T 12-10-2018 IPR000160 GGDEF domain TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1437 1598 6.4E-47 T 12-10-2018 IPR000160 GGDEF domain TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 Gene3D G3DSA:3.30.70.270 1434 1600 1.7E-49 T 12-10-2018 TDE_2580 6e8d31008c09f5b6574e695c9cac3d55 1774 SMART SM00267 1429 1599 7.4E-58 T 12-10-2018 IPR000160 GGDEF domain TDE_0395 0528eec29e9ecd695a81e471d0529a64 284 SUPERFAMILY SSF161098 74 260 7.19E-27 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0395 0528eec29e9ecd695a81e471d0529a64 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 277 5.7E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0395 0528eec29e9ecd695a81e471d0529a64 284 Gene3D G3DSA:1.10.3720.10 68 274 7.3E-21 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0694 480a2f31e26611d3535a533a50016baf 310 Gene3D G3DSA:3.40.50.300 1 241 1.0E-66 T 12-10-2018 TDE_0694 480a2f31e26611d3535a533a50016baf 310 Pfam PF13732 Domain of unknown function (DUF4162) 215 304 3.6E-10 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 TDE_0694 480a2f31e26611d3535a533a50016baf 310 SUPERFAMILY SSF52540 2 222 2.13E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0694 480a2f31e26611d3535a533a50016baf 310 Pfam PF00005 ABC transporter 18 161 1.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0694 480a2f31e26611d3535a533a50016baf 310 SMART SM00382 27 218 5.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1741 6581b59686a1f457e15e0f8fc65d3299 846 Gene3D G3DSA:1.10.3810.10 51 249 1.0E-62 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1741 6581b59686a1f457e15e0f8fc65d3299 846 Pfam PF00905 Penicillin binding protein transpeptidase domain 415 677 2.8E-19 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TDE_1741 6581b59686a1f457e15e0f8fc65d3299 846 SUPERFAMILY SSF53955 46 249 7.31E-62 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily TDE_1741 6581b59686a1f457e15e0f8fc65d3299 846 Gene3D G3DSA:3.40.710.10 383 782 1.3E-78 T 12-10-2018 TDE_1741 6581b59686a1f457e15e0f8fc65d3299 846 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 725 5.7E-168 T 12-10-2018 TDE_1741 6581b59686a1f457e15e0f8fc65d3299 846 Pfam PF00912 Transglycosylase 58 233 5.7E-55 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1741 6581b59686a1f457e15e0f8fc65d3299 846 SUPERFAMILY SSF56601 215 782 1.06E-95 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TDE_2236 5c20bf8674630d39aea86e7086f89207 485 SUPERFAMILY SSF51703 1 482 8.63E-206 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TDE_2236 5c20bf8674630d39aea86e7086f89207 485 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 4 482 1.1E-234 T 12-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TDE_2236 5c20bf8674630d39aea86e7086f89207 485 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 482 53.628 T 12-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TDE_2236 5c20bf8674630d39aea86e7086f89207 485 PIRSF PIRSF001495 1 483 4.5E-221 T 12-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TDE_2236 5c20bf8674630d39aea86e7086f89207 485 Gene3D G3DSA:3.90.970.10 418 483 4.3E-28 T 12-10-2018 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TDE_2236 5c20bf8674630d39aea86e7086f89207 485 Pfam PF06368 Methylaspartate mutase E chain (MutE) 42 482 3.6E-221 T 12-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TDE_2236 5c20bf8674630d39aea86e7086f89207 485 Gene3D G3DSA:3.20.20.240 1 417 1.9E-174 T 12-10-2018 TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 29 47 4.1E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 4.1E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 SUPERFAMILY SSF52540 6 179 1.23E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 Pfam PF02421 Ferrous iron transport protein B 7 160 9.8E-61 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 Gene3D G3DSA:3.40.50.300 6 199 2.3E-42 T 12-10-2018 TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 Pfam PF07670 Nucleoside recognition 439 536 5.8E-12 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 Pfam PF07670 Nucleoside recognition 804 912 1.3E-15 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 Pfam PF07664 Ferrous iron transport protein B C terminus 549 598 1.2E-12 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 12 642 8.8E-129 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 TDE_2063 b8de7f60ba52f0ec1f4ad073360c73bc 944 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 161 8.0E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 7.0E-48 T 12-10-2018 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 7.0E-48 T 12-10-2018 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 7.0E-48 T 12-10-2018 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 PRINTS PR00173 Glutamate-aspartate symporter signature 236 255 7.0E-48 T 12-10-2018 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 7.0E-48 T 12-10-2018 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 7.0E-48 T 12-10-2018 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 7.0E-48 T 12-10-2018 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 7.0E-48 T 12-10-2018 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 Gene3D G3DSA:1.10.3860.10 1 423 2.3E-123 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 SUPERFAMILY SSF118215 5 414 1.7E-103 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TDE_2336 cae91251cf2d3d058e4e91671235da79 423 Pfam PF00375 Sodium:dicarboxylate symporter family 5 414 7.2E-115 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 Gene3D G3DSA:3.40.50.1820 28 677 6.8E-237 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 Gene3D G3DSA:2.130.10.120 77 409 6.8E-237 T 12-10-2018 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 SUPERFAMILY SSF50993 8 415 3.66E-73 T 12-10-2018 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 Pfam PF00326 Prolyl oligopeptidase family 468 682 1.2E-67 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 9 408 2.9E-78 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 451 469 2.4E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 505 524 2.4E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 535 555 2.4E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 477 501 2.4E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 593 608 2.4E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 611 633 2.4E-50 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 TDE_2140 655e6cf8cd09f6c78ed3a51d3cd95ad3 685 SUPERFAMILY SSF53474 419 660 1.05E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_1424 af4869625a5dc48a06d3aeb6066c5ea6 138 Gene3D G3DSA:2.60.120.10 8 136 1.3E-42 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_1424 af4869625a5dc48a06d3aeb6066c5ea6 138 SUPERFAMILY SSF51182 18 133 4.6E-32 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily TDE_1424 af4869625a5dc48a06d3aeb6066c5ea6 138 Pfam PF05523 WxcM-like, C-terminal 16 131 3.7E-48 T 12-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 TDE_0823 eea59e2e8e1e3399e2f9f226c5ee96a3 143 Gene3D G3DSA:3.10.129.10 2 143 2.5E-45 T 12-10-2018 TDE_0823 eea59e2e8e1e3399e2f9f226c5ee96a3 143 SUPERFAMILY SSF54637 5 141 1.55E-39 T 12-10-2018 IPR029069 HotDog domain superfamily TDE_0823 eea59e2e8e1e3399e2f9f226c5ee96a3 143 Pfam PF07977 FabA-like domain 11 133 6.5E-25 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TDE_1919 11f6d35da24f2c16887047d2e28b2d13 523 TIGRFAM TIGR04321 spiroSPASM: spiro-SPASM protein 4 523 9.1E-192 T 12-10-2018 IPR027608 Spirochetes SPASM protein TDE_1919 11f6d35da24f2c16887047d2e28b2d13 523 SUPERFAMILY SSF102114 262 516 1.22E-12 T 12-10-2018 TDE_1919 11f6d35da24f2c16887047d2e28b2d13 523 Pfam PF13186 Iron-sulfur cluster-binding domain 453 516 7.7E-7 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain TDE_2118 ff4d4bc9b66bf667ea9351eac5126cef 703 Gene3D G3DSA:3.30.1360.40 205 295 4.0E-105 T 12-10-2018 TDE_2118 ff4d4bc9b66bf667ea9351eac5126cef 703 Gene3D G3DSA:1.10.268.10 332 428 4.0E-105 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TDE_2118 ff4d4bc9b66bf667ea9351eac5126cef 703 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 23 437 3.1E-115 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_2118 ff4d4bc9b66bf667ea9351eac5126cef 703 SMART SM00434 4 434 2.2E-104 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TDE_2118 ff4d4bc9b66bf667ea9351eac5126cef 703 Gene3D G3DSA:3.90.199.10 23 431 4.0E-105 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TDE_2118 ff4d4bc9b66bf667ea9351eac5126cef 703 SUPERFAMILY SSF56719 4 456 1.44E-109 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TDE_0239 76dbddab5b9ea996425029bea0214f01 384 SUPERFAMILY SSF53659 29 291 5.28E-22 T 12-10-2018 TDE_0239 76dbddab5b9ea996425029bea0214f01 384 Gene3D G3DSA:3.40.718.10 110 234 5.9E-10 T 12-10-2018 TDE_0239 76dbddab5b9ea996425029bea0214f01 384 PIRSF PIRSF036593 1 384 1.9E-151 T 12-10-2018 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit TDE_0239 76dbddab5b9ea996425029bea0214f01 384 Pfam PF02504 Fatty acid synthesis protein 29 363 3.6E-43 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 TDE_1625 e0b6a2aef0c6b34f8b5668327604fa1d 434 SUPERFAMILY SSF53383 4 434 3.72E-91 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_1625 e0b6a2aef0c6b34f8b5668327604fa1d 434 Gene3D G3DSA:3.90.1150.10 68 428 6.0E-136 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_1625 e0b6a2aef0c6b34f8b5668327604fa1d 434 Pfam PF02347 Glycine cleavage system P-protein 3 427 3.2E-119 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 TDE_1625 e0b6a2aef0c6b34f8b5668327604fa1d 434 PIRSF PIRSF006815 2 434 2.4E-151 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 TDE_1625 e0b6a2aef0c6b34f8b5668327604fa1d 434 Gene3D G3DSA:3.40.640.10 78 342 6.0E-136 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_0174 6cc0374c4577be84db2e5897bfb85ad1 478 PIRSF PIRSF000484 1 475 5.3E-157 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 TDE_0174 6cc0374c4577be84db2e5897bfb85ad1 478 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 461 2.6E-187 T 12-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 TDE_0174 6cc0374c4577be84db2e5897bfb85ad1 478 Gene3D G3DSA:3.20.20.70 146 314 2.4E-184 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0174 6cc0374c4577be84db2e5897bfb85ad1 478 SUPERFAMILY SSF54675 2 133 4.27E-46 T 12-10-2018 TDE_0174 6cc0374c4577be84db2e5897bfb85ad1 478 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 150 363 6.1E-10 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 TDE_0174 6cc0374c4577be84db2e5897bfb85ad1 478 SUPERFAMILY SSF51690 134 472 2.8E-115 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 TDE_0174 6cc0374c4577be84db2e5897bfb85ad1 478 Gene3D G3DSA:3.20.140.10 6 466 2.4E-184 T 12-10-2018 TDE_2483 3b0f5b106a82b68c31f580e60c4ade6f 259 Pfam PF04536 TPM domain 30 158 5.4E-27 T 12-10-2018 IPR007621 TPM domain TDE_2483 3b0f5b106a82b68c31f580e60c4ade6f 259 Gene3D G3DSA:3.10.310.50 21 164 5.3E-22 T 12-10-2018 TDE_1444 2b400120b19ddad80093888c2ec79ad6 470 Pfam PF10996 Beta-Casp domain 257 383 3.1E-24 T 12-10-2018 IPR022712 Beta-Casp domain TDE_1444 2b400120b19ddad80093888c2ec79ad6 470 SUPERFAMILY SSF56281 3 467 1.02E-118 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_1444 2b400120b19ddad80093888c2ec79ad6 470 SMART SM00849 15 244 4.7E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_1444 2b400120b19ddad80093888c2ec79ad6 470 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 398 458 2.2E-14 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain TDE_1444 2b400120b19ddad80093888c2ec79ad6 470 SMART SM01027 257 383 1.8E-54 T 12-10-2018 IPR022712 Beta-Casp domain TDE_1444 2b400120b19ddad80093888c2ec79ad6 470 Pfam PF00753 Metallo-beta-lactamase superfamily 20 135 4.3E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_1444 2b400120b19ddad80093888c2ec79ad6 470 Gene3D G3DSA:3.40.50.10890 225 409 2.4E-141 T 12-10-2018 TDE_1444 2b400120b19ddad80093888c2ec79ad6 470 Gene3D G3DSA:3.60.15.10 8 444 2.4E-141 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_1264 79ba1fefd600958111384168956d1747 374 SUPERFAMILY SSF48452 133 357 4.01E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1264 79ba1fefd600958111384168956d1747 374 SMART SM00028 33 66 80.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1264 79ba1fefd600958111384168956d1747 374 SMART SM00028 139 172 62.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1264 79ba1fefd600958111384168956d1747 374 SMART SM00028 323 356 18.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2309 97194c0292fbcef75825141a02d96832 513 Gene3D G3DSA:3.40.50.300 175 357 1.1E-63 T 12-10-2018 TDE_2309 97194c0292fbcef75825141a02d96832 513 SMART SM00065 15 162 0.0057 T 12-10-2018 IPR003018 GAF domain GO:0005515 TDE_2309 97194c0292fbcef75825141a02d96832 513 SUPERFAMILY SSF52540 185 427 2.08E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2309 97194c0292fbcef75825141a02d96832 513 SMART SM00382 206 349 6.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2309 97194c0292fbcef75825141a02d96832 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 272 287 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TDE_2309 97194c0292fbcef75825141a02d96832 513 Gene3D G3DSA:3.30.450.40 1 158 4.4E-13 T 12-10-2018 IPR029016 GAF-like domain superfamily TDE_2309 97194c0292fbcef75825141a02d96832 513 Gene3D G3DSA:1.10.8.60 358 434 3.3E-22 T 12-10-2018 TDE_2309 97194c0292fbcef75825141a02d96832 513 Pfam PF13185 GAF domain 15 152 8.4E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 TDE_2309 97194c0292fbcef75825141a02d96832 513 SUPERFAMILY SSF55781 14 152 2.07E-14 T 12-10-2018 TDE_2309 97194c0292fbcef75825141a02d96832 513 Gene3D G3DSA:1.10.10.60 443 513 2.4E-8 T 12-10-2018 TDE_2309 97194c0292fbcef75825141a02d96832 513 Pfam PF00158 Sigma-54 interaction domain 186 352 4.7E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TDE_0476 efb0f23544d582baeba4863db06f8364 238 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 163 1.1E-9 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TDE_0476 efb0f23544d582baeba4863db06f8364 238 SUPERFAMILY SSF52540 3 188 2.06E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0476 efb0f23544d582baeba4863db06f8364 238 Gene3D G3DSA:3.40.50.300 1 192 4.2E-23 T 12-10-2018 TDE_0476 efb0f23544d582baeba4863db06f8364 238 PIRSF PIRSF005624 1 198 2.0E-50 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 TDE_2585 8e4722d993ece8008ac4a017d7908047 775 Pfam PF07695 7TM diverse intracellular signalling 219 417 3.2E-26 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 TDE_2585 8e4722d993ece8008ac4a017d7908047 775 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 586 613 2.5E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2585 8e4722d993ece8008ac4a017d7908047 775 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 509 538 2.5E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2585 8e4722d993ece8008ac4a017d7908047 775 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 663 692 2.5E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2585 8e4722d993ece8008ac4a017d7908047 775 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 615 644 2.5E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_2585 8e4722d993ece8008ac4a017d7908047 775 SUPERFAMILY SSF58104 508 751 1.13E-43 T 12-10-2018 TDE_2585 8e4722d993ece8008ac4a017d7908047 775 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 556 713 5.4E-25 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2585 8e4722d993ece8008ac4a017d7908047 775 Gene3D G3DSA:1.10.287.950 445 762 3.4E-45 T 12-10-2018 TDE_2585 8e4722d993ece8008ac4a017d7908047 775 SMART SM00283 488 749 8.0E-23 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_2659 d86cc694d6015c8e5b89cf902bd3ca96 417 Pfam PF01966 HD domain 216 364 1.0E-15 T 12-10-2018 IPR006674 HD domain TDE_2659 d86cc694d6015c8e5b89cf902bd3ca96 417 SUPERFAMILY SSF55781 19 202 3.71E-26 T 12-10-2018 TDE_2659 d86cc694d6015c8e5b89cf902bd3ca96 417 SMART SM00471 209 374 1.9E-7 T 12-10-2018 IPR003607 HD/PDEase domain TDE_2659 d86cc694d6015c8e5b89cf902bd3ca96 417 SMART SM00065 31 198 4.3E-16 T 12-10-2018 IPR003018 GAF domain GO:0005515 TDE_2659 d86cc694d6015c8e5b89cf902bd3ca96 417 Pfam PF01590 GAF domain 31 188 7.0E-12 T 12-10-2018 IPR003018 GAF domain GO:0005515 TDE_2659 d86cc694d6015c8e5b89cf902bd3ca96 417 Gene3D G3DSA:3.30.450.40 8 193 5.6E-33 T 12-10-2018 IPR029016 GAF-like domain superfamily TDE_2659 d86cc694d6015c8e5b89cf902bd3ca96 417 SUPERFAMILY SSF109604 211 405 3.45E-30 T 12-10-2018 TDE_2659 d86cc694d6015c8e5b89cf902bd3ca96 417 Gene3D G3DSA:1.10.3210.10 194 417 5.5E-69 T 12-10-2018 TDE_2084 b898488e54e979a9163863ceb13f9842 251 SUPERFAMILY SSF75217 4 171 1.44E-26 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases TDE_2084 b898488e54e979a9163863ceb13f9842 251 PIRSF PIRSF004808 1 248 3.0E-45 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 TDE_2084 b898488e54e979a9163863ceb13f9842 251 Gene3D G3DSA:3.40.1280.10 3 168 1.9E-43 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TDE_2084 b898488e54e979a9163863ceb13f9842 251 Pfam PF00588 SpoU rRNA Methylase family 6 159 6.4E-26 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 TIGRFAM TIGR01228 hutU: urocanate hydratase 98 640 2.3E-135 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 Gene3D G3DSA:3.40.50.10730 218 440 1.9E-213 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 PIRSF PIRSF001423 75 661 1.3E-181 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 Pfam PF01175 Urocanase Rossmann-like domain 217 439 1.4E-82 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 Hamap MF_00577 Urocanate hydratase [hutU]. 59 659 43.375 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 Pfam PF17391 Urocanase N-terminal domain 89 214 2.2E-51 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 SUPERFAMILY SSF111326 80 648 4.05E-225 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 ProSitePatterns PS01233 Urocanase signature. 538 553 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 Pfam PF17392 Urocanase C-terminal domain 444 640 4.7E-82 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_2606 db9df217bafd8a7e240662bddf8d308b 674 Gene3D G3DSA:3.40.1770.10 95 637 1.9E-213 T 12-10-2018 TDE_0350 6abbeef4592ec93a79ba2701f25bdd9f 455 PIRSF PIRSF006603 2 449 3.1E-74 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0350 6abbeef4592ec93a79ba2701f25bdd9f 455 Pfam PF01554 MatE 255 410 6.9E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0350 6abbeef4592ec93a79ba2701f25bdd9f 455 Pfam PF01554 MatE 26 189 9.3E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0350 6abbeef4592ec93a79ba2701f25bdd9f 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 414 1.7E-53 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0195 0bb8e908f911591d8c5329209268df91 189 Gene3D G3DSA:3.40.630.30 5 185 5.5E-40 T 12-10-2018 TDE_0195 0bb8e908f911591d8c5329209268df91 189 Pfam PF13302 Acetyltransferase (GNAT) domain 22 161 2.8E-23 T 12-10-2018 IPR000182 GNAT domain TDE_0195 0bb8e908f911591d8c5329209268df91 189 SUPERFAMILY SSF55729 14 186 4.88E-42 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_0524 713215af0de8fbbc7c16bd6d8bdd171d 151 Pfam PF09406 Protein of unknown function (DUF2004) 62 151 1.1E-23 T 12-10-2018 IPR018546 Protein of unknown function DUF2004 TDE_0358 754230d6059f953f4d2e8259ce87aff7 281 SUPERFAMILY SSF53474 22 273 4.25E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0358 754230d6059f953f4d2e8259ce87aff7 281 Gene3D G3DSA:3.40.50.1820 18 274 3.9E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0358 754230d6059f953f4d2e8259ce87aff7 281 Pfam PF12146 Serine aminopeptidase, S33 55 199 5.7E-18 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 SMART SM00729 152 376 1.8E-55 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 2 450 1.9E-172 T 12-10-2018 TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 156 176 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 Gene3D G3DSA:3.80.30.20 150 390 7.6E-87 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 Pfam PF01938 TRAM domain 388 448 3.1E-6 T 12-10-2018 IPR002792 TRAM domain TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 Gene3D G3DSA:3.40.50.12160 1 135 6.6E-29 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 446 7.5E-142 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 SUPERFAMILY SSF102114 141 380 4.05E-59 T 12-10-2018 TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 451 63.982 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 Pfam PF00919 Uncharacterized protein family UPF0004 3 100 4.5E-26 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TDE_1576 93d53fd8e3a778dba266625d4314efa3 451 Pfam PF04055 Radical SAM superfamily 156 333 1.1E-31 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_0847 ca32d6191e57f6df81bc7637b84e6003 122 Pfam PF03692 Putative zinc- or iron-chelating domain 7 94 2.7E-7 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein TDE_1536 88be2eaa0dfeba5149ddb4ca5d8a11de 174 Gene3D G3DSA:1.25.40.10 106 173 1.0E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1536 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SMART SM00028 73 106 1.0E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1536 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SMART SM00028 5 38 29.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1536 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SMART SM00028 107 140 0.04 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1536 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SMART SM00028 39 72 17.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1536 88be2eaa0dfeba5149ddb4ca5d8a11de 174 SUPERFAMILY SSF48452 4 171 1.57E-32 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1536 88be2eaa0dfeba5149ddb4ca5d8a11de 174 Pfam PF13414 TPR repeat 18 51 2.6E-6 T 12-10-2018 TDE_1536 88be2eaa0dfeba5149ddb4ca5d8a11de 174 Gene3D G3DSA:1.25.40.10 1 105 1.4E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1536 88be2eaa0dfeba5149ddb4ca5d8a11de 174 Pfam PF13432 Tetratricopeptide repeat 79 138 3.8E-10 T 12-10-2018 TDE_1753 0500f080b4ee4e179785faa262fa1069 339 Gene3D G3DSA:3.40.50.720 5 276 1.8E-139 T 12-10-2018 TDE_1753 0500f080b4ee4e179785faa262fa1069 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 326 1.1E-61 T 12-10-2018 IPR016040 NAD(P)-binding domain TDE_1753 0500f080b4ee4e179785faa262fa1069 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 336 7.2E-134 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 TDE_1753 0500f080b4ee4e179785faa262fa1069 339 SUPERFAMILY SSF51735 3 336 7.54E-97 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_1753 0500f080b4ee4e179785faa262fa1069 339 Gene3D G3DSA:3.90.25.10 195 331 1.8E-139 T 12-10-2018 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 Gene3D G3DSA:2.30.30.300 176 219 1.7E-93 T 12-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 Gene3D G3DSA:3.40.50.620 10 277 1.7E-93 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 Pfam PF01921 tRNA synthetases class I (K) 9 369 2.0E-129 T 12-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 Gene3D G3DSA:1.10.10.860 278 325 2.0E-21 T 12-10-2018 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 Gene3D G3DSA:1.10.10.350 436 527 1.5E-19 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 45 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 Gene3D G3DSA:1.10.10.770 326 435 7.2E-26 T 12-10-2018 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 SUPERFAMILY SSF52374 9 326 9.01E-59 T 12-10-2018 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 8 528 32.961 T 12-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 8 527 2.7E-166 T 12-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TDE_2553 20f97e614d8c8c8fb157f9712a418a15 528 SUPERFAMILY SSF48163 330 527 7.06E-37 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TDE_2384 0b77c89043875f103a41da38a665865e 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 176 5.0E-33 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TDE_2384 0b77c89043875f103a41da38a665865e 196 PIRSF PIRSF000709 2 159 4.2E-10 T 12-10-2018 TDE_2384 0b77c89043875f103a41da38a665865e 196 SMART SM00855 2 150 7.3E-7 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TDE_2384 0b77c89043875f103a41da38a665865e 196 SUPERFAMILY SSF53254 2 185 3.33E-39 T 12-10-2018 IPR029033 Histidine phosphatase superfamily TDE_2384 0b77c89043875f103a41da38a665865e 196 Gene3D G3DSA:3.40.50.1240 1 192 8.9E-36 T 12-10-2018 IPR029033 Histidine phosphatase superfamily TDE_1507 cd537f44f52dd97136d8c76b89481fdc 220 SUPERFAMILY SSF143548 16 135 2.35E-32 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TDE_1507 cd537f44f52dd97136d8c76b89481fdc 220 Gene3D G3DSA:3.30.70.260 145 218 3.1E-11 T 12-10-2018 TDE_1507 cd537f44f52dd97136d8c76b89481fdc 220 Gene3D G3DSA:3.30.1330.90 10 134 4.4E-21 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TDE_1507 cd537f44f52dd97136d8c76b89481fdc 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 3 193 2.1E-60 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 TDE_1507 cd537f44f52dd97136d8c76b89481fdc 220 PIRSF PIRSF036692 1 219 1.4E-76 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 TDE_1507 cd537f44f52dd97136d8c76b89481fdc 220 Pfam PF03315 Serine dehydratase beta chain 9 77 2.5E-14 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 TDE_1507 cd537f44f52dd97136d8c76b89481fdc 220 SUPERFAMILY SSF55021 135 217 3.41E-11 T 12-10-2018 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 SUPERFAMILY SSF50249 176 251 1.37E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 Gene3D G3DSA:1.10.720.10 125 173 8.7E-10 T 12-10-2018 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 SMART SM00959 130 174 1.2E-11 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 SUPERFAMILY SSF68912 128 174 4.32E-6 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 284 487 2.4E-19 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 Pfam PF07497 Rho termination factor, RNA-binding domain 179 251 4.7E-29 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 TIGRFAM TIGR00767 rho: transcription termination factor Rho 128 541 1.8E-215 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 Gene3D G3DSA:2.40.50.140 174 250 3.8E-32 T 12-10-2018 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 Hamap MF_01884 Transcription termination factor Rho [rho]. 128 543 220.734 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 SUPERFAMILY SSF52540 217 495 8.31E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 SMART SM00357 179 245 3.5E-18 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 Gene3D G3DSA:3.40.50.300 257 541 2.3E-125 T 12-10-2018 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 Pfam PF07498 Rho termination factor, N-terminal domain 130 174 1.7E-14 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TDE_1503 eb9b668a58b77ca708f34ccf160e8830 548 SMART SM00382 294 488 1.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2402 ca0fd1e03bc03af05e39bca39e0e8e07 297 Pfam PF04055 Radical SAM superfamily 85 241 2.3E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_2402 ca0fd1e03bc03af05e39bca39e0e8e07 297 Gene3D G3DSA:3.20.20.70 75 292 1.6E-35 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2402 ca0fd1e03bc03af05e39bca39e0e8e07 297 SUPERFAMILY SSF102114 56 287 2.88E-32 T 12-10-2018 TDE_2402 ca0fd1e03bc03af05e39bca39e0e8e07 297 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 15 297 1.1E-82 T 12-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme TDE_2402 ca0fd1e03bc03af05e39bca39e0e8e07 297 SMART SM00729 78 287 3.4E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_2402 ca0fd1e03bc03af05e39bca39e0e8e07 297 PIRSF PIRSF004869 1 297 9.0E-80 T 12-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted TDE_1078 e461129dc97ba2f3633b8864a0e03a11 408 PIRSF PIRSF005243 1 408 3.9E-121 T 12-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 TDE_1078 e461129dc97ba2f3633b8864a0e03a11 408 SUPERFAMILY SSF52218 262 404 2.79E-29 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_1078 e461129dc97ba2f3633b8864a0e03a11 408 Gene3D G3DSA:3.60.15.10 1 252 2.2E-81 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_1078 e461129dc97ba2f3633b8864a0e03a11 408 SUPERFAMILY SSF56281 3 252 6.72E-43 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_1078 e461129dc97ba2f3633b8864a0e03a11 408 Gene3D G3DSA:3.40.50.360 261 398 3.2E-29 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_1078 e461129dc97ba2f3633b8864a0e03a11 408 Pfam PF00753 Metallo-beta-lactamase superfamily 34 174 3.7E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_1078 e461129dc97ba2f3633b8864a0e03a11 408 SMART SM00849 35 232 2.5E-25 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_1763 62b19bdcaed5719a330f14ab42c03cae 109 SUPERFAMILY SSF53335 8 101 1.21E-16 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1763 62b19bdcaed5719a330f14ab42c03cae 109 Pfam PF13649 Methyltransferase domain 48 99 2.4E-6 T 12-10-2018 TDE_1763 62b19bdcaed5719a330f14ab42c03cae 109 Gene3D G3DSA:3.40.50.150 3 109 9.4E-19 T 12-10-2018 TDE_1391 5e6eee1c1ffe219596b72311c549db7b 344 Pfam PF03116 NQR2, RnfD, RnfE family 10 332 3.7E-49 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 TDE_2006 815d233d1b27792a1d07fff477508a9c 789 Gene3D G3DSA:1.20.1640.10 609 789 3.7E-13 T 12-10-2018 TDE_2006 815d233d1b27792a1d07fff477508a9c 789 Gene3D G3DSA:1.20.1640.10 215 401 1.3E-8 T 12-10-2018 TDE_2006 815d233d1b27792a1d07fff477508a9c 789 Pfam PF03176 MMPL family 591 780 8.8E-7 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TDE_2006 815d233d1b27792a1d07fff477508a9c 789 Pfam PF03176 MMPL family 137 391 6.3E-16 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TDE_2006 815d233d1b27792a1d07fff477508a9c 789 SUPERFAMILY SSF82866 570 783 1.57E-29 T 12-10-2018 TDE_2006 815d233d1b27792a1d07fff477508a9c 789 SUPERFAMILY SSF82866 210 388 1.44E-25 T 12-10-2018 TDE_0133 8e963cdb3d01d10e9469ff8b83211bf0 249 Gene3D G3DSA:1.20.120.530 81 240 2.3E-7 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TDE_0133 8e963cdb3d01d10e9469ff8b83211bf0 249 SUPERFAMILY SSF46785 10 76 3.72E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0133 8e963cdb3d01d10e9469ff8b83211bf0 249 SMART SM00345 13 72 5.6E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TDE_0133 8e963cdb3d01d10e9469ff8b83211bf0 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.2E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TDE_0133 8e963cdb3d01d10e9469ff8b83211bf0 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.3E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TDE_0133 8e963cdb3d01d10e9469ff8b83211bf0 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.3E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TDE_0133 8e963cdb3d01d10e9469ff8b83211bf0 249 Gene3D G3DSA:1.10.10.10 1 74 4.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 SMART SM00382 28 218 6.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 SMART SM00382 293 468 1.8E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 ProSitePatterns PS00211 ABC transporters family signature. 393 407 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 SUPERFAMILY SSF52540 2 235 1.45E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 Pfam PF00005 ABC transporter 284 421 4.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 Pfam PF00005 ABC transporter 21 169 1.0E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 Gene3D G3DSA:3.40.50.300 1 264 5.1E-61 T 12-10-2018 TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 Gene3D G3DSA:3.40.50.300 265 488 6.6E-56 T 12-10-2018 TDE_0282 d225a0daeb2effe89a53f882ae6844c5 489 SUPERFAMILY SSF52540 250 472 1.71E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1337 f2b1b69bf2bd21c040d653be905be601 346 Pfam PF10974 Protein of unknown function (DUF2804) 15 343 2.4E-111 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 TDE_0246 b84ea066d14e3a90acc69cee5855405e 189 Gene3D G3DSA:1.10.357.10 2 187 3.7E-23 T 12-10-2018 TDE_0246 b84ea066d14e3a90acc69cee5855405e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0246 b84ea066d14e3a90acc69cee5855405e 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0246 b84ea066d14e3a90acc69cee5855405e 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 4.1E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0246 b84ea066d14e3a90acc69cee5855405e 189 SUPERFAMILY SSF46689 2 72 3.59E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_1900 fdadf326166749f54b28ae659ce1b149 84 Gene3D G3DSA:1.10.10.10 1 83 4.0E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1900 fdadf326166749f54b28ae659ce1b149 84 SUPERFAMILY SSF46785 1 44 7.44E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_1266 832cb4c02dbe4a7f9507dc4a5a569863 366 Gene3D G3DSA:3.30.1330.10 24 190 4.9E-61 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TDE_1266 832cb4c02dbe4a7f9507dc4a5a569863 366 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 27 353 1.5E-105 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_1266 832cb4c02dbe4a7f9507dc4a5a569863 366 Pfam PF02769 AIR synthase related protein, C-terminal domain 196 356 1.8E-22 T 12-10-2018 IPR010918 PurM-like, C-terminal domain TDE_1266 832cb4c02dbe4a7f9507dc4a5a569863 366 Gene3D G3DSA:3.90.650.10 191 359 1.5E-53 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TDE_1266 832cb4c02dbe4a7f9507dc4a5a569863 366 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 25 362 39.089 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TDE_1266 832cb4c02dbe4a7f9507dc4a5a569863 366 SUPERFAMILY SSF56042 192 357 6.28E-46 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TDE_1266 832cb4c02dbe4a7f9507dc4a5a569863 366 Pfam PF00586 AIR synthase related protein, N-terminal domain 81 184 3.0E-15 T 12-10-2018 IPR016188 PurM-like, N-terminal domain TDE_1266 832cb4c02dbe4a7f9507dc4a5a569863 366 SUPERFAMILY SSF55326 26 190 7.78E-44 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TDE_2226 ecc01ab654638809aa8185306e8e043a 323 PRINTS PR00691 Adhesin B signature 76 95 1.7E-12 T 12-10-2018 IPR006129 Adhesin B GO:0007155 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 PRINTS PR00691 Adhesin B signature 32 53 1.7E-12 T 12-10-2018 IPR006129 Adhesin B GO:0007155 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 PRINTS PR00691 Adhesin B signature 301 319 1.7E-12 T 12-10-2018 IPR006129 Adhesin B GO:0007155 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 PRINTS PR00691 Adhesin B signature 57 75 1.7E-12 T 12-10-2018 IPR006129 Adhesin B GO:0007155 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 320 2.9E-75 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 Gene3D G3DSA:3.40.50.1980 22 215 1.3E-53 T 12-10-2018 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 SUPERFAMILY SSF53807 32 322 1.32E-83 T 12-10-2018 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 Gene3D G3DSA:3.40.50.1980 216 323 5.4E-30 T 12-10-2018 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 PRINTS PR00690 Adhesin family signature 76 93 6.3E-10 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 PRINTS PR00690 Adhesin family signature 63 76 6.3E-10 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 PRINTS PR00690 Adhesin family signature 240 258 6.3E-10 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_2226 ecc01ab654638809aa8185306e8e043a 323 PRINTS PR00690 Adhesin family signature 32 50 6.3E-10 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_0951 cb98b6f591166866bca52833cf6ba780 348 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 36 338 1.6E-70 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TDE_0951 cb98b6f591166866bca52833cf6ba780 348 Gene3D G3DSA:3.40.50.2300 146 342 5.3E-116 T 12-10-2018 TDE_0951 cb98b6f591166866bca52833cf6ba780 348 Gene3D G3DSA:3.40.50.2300 38 305 5.3E-116 T 12-10-2018 TDE_0951 cb98b6f591166866bca52833cf6ba780 348 SUPERFAMILY SSF53822 37 275 4.42E-9 T 12-10-2018 IPR028082 Periplasmic binding protein-like I TDE_0604 4e76c123c70d6bc0572be6db90e8bfbd 266 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 24 253 6.1E-88 T 12-10-2018 IPR014127 Conserved hypothetical protein CHP02757 TDE_0604 4e76c123c70d6bc0572be6db90e8bfbd 266 Pfam PF09674 Protein of unknown function (DUF2400) 28 251 4.5E-78 T 12-10-2018 IPR014127 Conserved hypothetical protein CHP02757 TDE_1706 7f147b7cd57799af997d70753440539c 192 Gene3D G3DSA:3.90.950.20 3 177 8.4E-43 T 12-10-2018 IPR036653 CinA-like, C-terminal TDE_1706 7f147b7cd57799af997d70753440539c 192 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 173 7.1E-31 T 12-10-2018 IPR008136 CinA, C-terminal TDE_1706 7f147b7cd57799af997d70753440539c 192 SUPERFAMILY SSF142433 5 177 3.4E-38 T 12-10-2018 IPR036653 CinA-like, C-terminal TDE_1706 7f147b7cd57799af997d70753440539c 192 Pfam PF02464 Competence-damaged protein 6 174 9.6E-36 T 12-10-2018 IPR008136 CinA, C-terminal TDE_0804 47bcb1596e333ebbbd414873e9d0c455 375 Pfam PF01139 tRNA-splicing ligase RtcB 39 129 4.3E-15 T 12-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 TDE_0804 47bcb1596e333ebbbd414873e9d0c455 375 Gene3D G3DSA:3.90.1860.10 1 373 8.1E-80 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 TDE_0804 47bcb1596e333ebbbd414873e9d0c455 375 SUPERFAMILY SSF103365 1 373 1.31E-102 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 TDE_0804 47bcb1596e333ebbbd414873e9d0c455 375 Pfam PF01139 tRNA-splicing ligase RtcB 124 372 3.9E-55 T 12-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 TDE_2552 551b51ccd9565a742ad5e72962d8cf74 524 Gene3D G3DSA:3.40.50.300 281 522 7.7E-70 T 12-10-2018 TDE_2552 551b51ccd9565a742ad5e72962d8cf74 524 SUPERFAMILY SSF52540 290 521 1.42E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2552 551b51ccd9565a742ad5e72962d8cf74 524 SUPERFAMILY SSF90123 2 278 1.44E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2552 551b51ccd9565a742ad5e72962d8cf74 524 SMART SM00382 334 521 1.3E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2552 551b51ccd9565a742ad5e72962d8cf74 524 Pfam PF00005 ABC transporter 325 474 2.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2552 551b51ccd9565a742ad5e72962d8cf74 524 Pfam PF00664 ABC transporter transmembrane region 9 249 1.7E-29 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2552 551b51ccd9565a742ad5e72962d8cf74 524 ProSitePatterns PS00211 ABC transporters family signature. 446 460 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2552 551b51ccd9565a742ad5e72962d8cf74 524 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 338 351 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TDE_2552 551b51ccd9565a742ad5e72962d8cf74 524 Gene3D G3DSA:1.20.1560.10 1 280 1.5E-38 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 4 59 4.5E-20 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 Pfam PF01165 Ribosomal protein S21 4 56 1.4E-18 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 18.446 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 Gene3D G3DSA:1.20.5.1150 16 63 2.1E-12 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2473 b019eaae9cb2f9c0ea3da48b63ff3bee 69 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 55 4.0E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0327 4eafc77f9b5fd93653e9783bf36034b2 1395 Pfam PF13395 HNH endonuclease 857 910 1.3E-22 T 12-10-2018 IPR003615 HNH nuclease TDE_0327 4eafc77f9b5fd93653e9783bf36034b2 1395 Pfam PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 1095 1388 8.4E-86 T 12-10-2018 IPR032237 CRISPR-associated endonuclease Cas9, PAM-interacting domain TDE_0327 4eafc77f9b5fd93653e9783bf36034b2 1395 Pfam PF16592 REC lobe of CRISPR-associated endonuclease Cas9 175 736 3.8E-136 T 12-10-2018 IPR032240 CRISPR-associated endonuclease Cas9, REC lobe TDE_0327 4eafc77f9b5fd93653e9783bf36034b2 1395 SMART SM00507 846 903 2.6E-4 T 12-10-2018 IPR003615 HNH nuclease TDE_0327 4eafc77f9b5fd93653e9783bf36034b2 1395 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 6 1388 18.974 T 12-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 TDE_0327 4eafc77f9b5fd93653e9783bf36034b2 1395 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 7 1071 0.0 T 12-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 TDE_0327 4eafc77f9b5fd93653e9783bf36034b2 1395 Pfam PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 53 85 2.4E-12 T 12-10-2018 IPR032239 CRISPR-associated endonuclease Cas9, bridge helix TDE_0327 4eafc77f9b5fd93653e9783bf36034b2 1395 Gene3D G3DSA:3.30.40.60 821 929 1.2E-12 T 12-10-2018 TDE_0633 70d4bb6f50f8093283a8459f4c3717d6 266 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 111 233 7.4E-38 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 TDE_0633 70d4bb6f50f8093283a8459f4c3717d6 266 Gene3D G3DSA:3.30.1380.10 47 255 1.6E-54 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TDE_0633 70d4bb6f50f8093283a8459f4c3717d6 266 SUPERFAMILY SSF55166 104 241 4.19E-32 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TDE_1618 6ffd729ad7e81b09c4c174d382fc8691 278 SUPERFAMILY SSF52200 65 111 3.14E-5 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 Gene3D G3DSA:3.40.50.920 540 675 4.2E-26 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 Gene3D G3DSA:3.40.50.970 2 331 2.6E-114 T 12-10-2018 TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 327 4.1E-135 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 Pfam PF02779 Transketolase, pyrimidine binding domain 353 524 3.1E-45 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 Gene3D G3DSA:3.40.50.970 337 532 8.6E-75 T 12-10-2018 TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 SUPERFAMILY SSF52518 344 527 3.85E-66 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 SMART SM00861 354 525 6.6E-69 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 SUPERFAMILY SSF52922 538 674 1.57E-24 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 673 1.9E-238 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 SUPERFAMILY SSF52518 4 321 2.22E-102 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_1308 39126d292b2abbb4ff4d2547a044fb80 675 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TDE_1414 07a442765db935e28da7e51b5d750be9 378 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 229 345 5.2E-17 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TDE_1414 07a442765db935e28da7e51b5d750be9 378 Gene3D G3DSA:3.40.50.970 177 377 4.2E-28 T 12-10-2018 TDE_1414 07a442765db935e28da7e51b5d750be9 378 Gene3D G3DSA:3.40.50.970 4 173 3.0E-14 T 12-10-2018 TDE_1414 07a442765db935e28da7e51b5d750be9 378 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 170 5.2E-19 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TDE_1414 07a442765db935e28da7e51b5d750be9 378 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 243 262 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TDE_1414 07a442765db935e28da7e51b5d750be9 378 SUPERFAMILY SSF52518 4 170 1.51E-21 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_1414 07a442765db935e28da7e51b5d750be9 378 TIGRFAM TIGR03297 Ppyr-DeCO2ase: phosphonopyruvate decarboxylase 15 373 3.1E-173 T 12-10-2018 IPR017684 Phosphonopyruvate decarboxylase GO:0032923|GO:0033980 KEGG: 00440+4.1.1.82|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7510|MetaCyc: PWY-7769 TDE_1414 07a442765db935e28da7e51b5d750be9 378 SUPERFAMILY SSF52518 184 371 3.22E-32 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_1852 0680fd6d04a4fcd662d861020de714bb 250 SUPERFAMILY SSF52540 3 245 4.69E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1852 0680fd6d04a4fcd662d861020de714bb 250 Pfam PF00005 ABC transporter 24 193 5.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1852 0680fd6d04a4fcd662d861020de714bb 250 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1852 0680fd6d04a4fcd662d861020de714bb 250 SMART SM00382 32 241 2.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1852 0680fd6d04a4fcd662d861020de714bb 250 Gene3D G3DSA:3.40.50.300 1 250 1.5E-58 T 12-10-2018 TDE_2699 68683ef38a68fb8e7857ca8d7e40f245 555 Pfam PF05262 Borrelia P83/100 protein 25 520 4.7E-237 T 12-10-2018 IPR007926 Borrelia P83100 TDE_2472 d0d7d76e2e220180fb94cb1f8df1e304 394 Pfam PF00665 Integrase core domain 141 266 4.1E-8 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TDE_2472 d0d7d76e2e220180fb94cb1f8df1e304 394 Pfam PF13384 Homeodomain-like domain 10 58 4.4E-6 T 12-10-2018 TDE_2472 d0d7d76e2e220180fb94cb1f8df1e304 394 Gene3D G3DSA:3.30.420.10 135 299 1.6E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_2472 d0d7d76e2e220180fb94cb1f8df1e304 394 SUPERFAMILY SSF53098 134 275 1.82E-12 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_2472 d0d7d76e2e220180fb94cb1f8df1e304 394 SUPERFAMILY SSF46689 11 119 4.66E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_0039 d0d7d76e2e220180fb94cb1f8df1e304 394 Pfam PF00665 Integrase core domain 141 266 4.1E-8 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TDE_0039 d0d7d76e2e220180fb94cb1f8df1e304 394 Pfam PF13384 Homeodomain-like domain 10 58 4.4E-6 T 12-10-2018 TDE_0039 d0d7d76e2e220180fb94cb1f8df1e304 394 Gene3D G3DSA:3.30.420.10 135 299 1.6E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_0039 d0d7d76e2e220180fb94cb1f8df1e304 394 SUPERFAMILY SSF53098 134 275 1.82E-12 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_0039 d0d7d76e2e220180fb94cb1f8df1e304 394 SUPERFAMILY SSF46689 11 119 4.66E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_2033 d0d7d76e2e220180fb94cb1f8df1e304 394 Pfam PF00665 Integrase core domain 141 266 4.1E-8 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TDE_2033 d0d7d76e2e220180fb94cb1f8df1e304 394 Pfam PF13384 Homeodomain-like domain 10 58 4.4E-6 T 12-10-2018 TDE_2033 d0d7d76e2e220180fb94cb1f8df1e304 394 Gene3D G3DSA:3.30.420.10 135 299 1.6E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_2033 d0d7d76e2e220180fb94cb1f8df1e304 394 SUPERFAMILY SSF53098 134 275 1.82E-12 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_2033 d0d7d76e2e220180fb94cb1f8df1e304 394 SUPERFAMILY SSF46689 11 119 4.66E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_0826 c8345e648a258eba09d11da12d223440 58 Gene3D G3DSA:3.30.160.160 2 49 1.5E-24 T 12-10-2018 TDE_0826 c8345e648a258eba09d11da12d223440 58 Pfam PF07411 Domain of unknown function (DUF1508) 10 57 9.2E-25 T 12-10-2018 IPR010879 Domain of unknown function DUF1508 TDE_0826 c8345e648a258eba09d11da12d223440 58 SUPERFAMILY SSF160113 1 57 3.53E-22 T 12-10-2018 IPR036913 YegP-like superfamily TDE_1958 a695c23e5e622ef25891d1faa3b5b1e7 458 Pfam PF13306 Leucine rich repeats (6 copies) 331 422 1.3E-24 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1958 a695c23e5e622ef25891d1faa3b5b1e7 458 Pfam PF13306 Leucine rich repeats (6 copies) 275 304 0.2 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1958 a695c23e5e622ef25891d1faa3b5b1e7 458 Pfam PF13306 Leucine rich repeats (6 copies) 194 246 7.6E-13 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1958 a695c23e5e622ef25891d1faa3b5b1e7 458 Pfam PF13306 Leucine rich repeats (6 copies) 138 168 0.25 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1958 a695c23e5e622ef25891d1faa3b5b1e7 458 Pfam PF13306 Leucine rich repeats (6 copies) 38 112 9.2E-19 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1958 a695c23e5e622ef25891d1faa3b5b1e7 458 SUPERFAMILY SSF52058 41 416 1.6E-18 T 12-10-2018 TDE_1958 a695c23e5e622ef25891d1faa3b5b1e7 458 Gene3D G3DSA:3.80.10.10 270 455 1.7E-49 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1958 a695c23e5e622ef25891d1faa3b5b1e7 458 Gene3D G3DSA:3.80.10.10 138 246 1.0E-32 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1958 a695c23e5e622ef25891d1faa3b5b1e7 458 Gene3D G3DSA:3.80.10.10 10 137 1.1E-25 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0676 7b8fe312f7fbcb8271d346df58da3e25 139 Gene3D G3DSA:1.10.10.10 1 139 3.9E-50 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0676 7b8fe312f7fbcb8271d346df58da3e25 139 SUPERFAMILY SSF46785 7 135 7.41E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0676 7b8fe312f7fbcb8271d346df58da3e25 139 Pfam PF02082 Transcriptional regulator 1 82 9.9E-21 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type TDE_0592 8625d7514d24d2ac8fc507891318937e 191 Gene3D G3DSA:2.40.50.100 112 188 1.5E-29 T 12-10-2018 TDE_0592 8625d7514d24d2ac8fc507891318937e 191 SUPERFAMILY SSF51230 112 188 1.57E-23 T 12-10-2018 IPR011053 Single hybrid motif TDE_0592 8625d7514d24d2ac8fc507891318937e 191 Pfam PF00364 Biotin-requiring enzyme 115 188 2.2E-22 T 12-10-2018 IPR000089 Biotin/lipoyl attachment TDE_0592 8625d7514d24d2ac8fc507891318937e 191 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 150 163 2.2E-15 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TDE_0592 8625d7514d24d2ac8fc507891318937e 191 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 118 131 2.2E-15 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TDE_0592 8625d7514d24d2ac8fc507891318937e 191 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 135 149 2.2E-15 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TDE_0592 8625d7514d24d2ac8fc507891318937e 191 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 84 189 3.7E-38 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TDE_1387 c454476fb99c5b9ba9b1bf34b0c6fc07 305 SUPERFAMILY SSF55120 87 293 1.07E-37 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_1387 c454476fb99c5b9ba9b1bf34b0c6fc07 305 Gene3D G3DSA:3.30.2350.10 89 297 5.5E-38 T 12-10-2018 TDE_1387 c454476fb99c5b9ba9b1bf34b0c6fc07 305 Pfam PF00849 RNA pseudouridylate synthase 96 230 2.2E-21 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_1387 c454476fb99c5b9ba9b1bf34b0c6fc07 305 SUPERFAMILY SSF55174 17 67 6.12E-5 T 12-10-2018 TDE_1387 c454476fb99c5b9ba9b1bf34b0c6fc07 305 Gene3D G3DSA:3.10.290.10 5 69 1.1E-9 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TDE_1856 0b45ebe12c20f71f6ff4b4bd83d90ee2 247 Pfam PF13353 4Fe-4S single cluster domain 17 138 9.6E-13 T 12-10-2018 TDE_1856 0b45ebe12c20f71f6ff4b4bd83d90ee2 247 Pfam PF04055 Radical SAM superfamily 21 194 8.9E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_1856 0b45ebe12c20f71f6ff4b4bd83d90ee2 247 SUPERFAMILY SSF102114 21 201 3.4E-19 T 12-10-2018 TDE_1856 0b45ebe12c20f71f6ff4b4bd83d90ee2 247 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 2 209 4.4E-43 T 12-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein TDE_1856 0b45ebe12c20f71f6ff4b4bd83d90ee2 247 Gene3D G3DSA:3.20.20.70 1 239 1.4E-29 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0212 dadc4349406e8fd0860133dbf5824b27 325 PIRSF PIRSF027386 1 324 9.3E-119 T 12-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type TDE_0212 dadc4349406e8fd0860133dbf5824b27 325 Pfam PF09084 NMT1/THI5 like 77 259 2.7E-13 T 12-10-2018 IPR015168 SsuA/THI5-like TDE_0212 dadc4349406e8fd0860133dbf5824b27 325 Gene3D G3DSA:3.40.190.10 111 219 7.2E-83 T 12-10-2018 TDE_0212 dadc4349406e8fd0860133dbf5824b27 325 SUPERFAMILY SSF53850 55 320 1.15E-30 T 12-10-2018 TDE_0212 dadc4349406e8fd0860133dbf5824b27 325 Gene3D G3DSA:3.40.190.10 37 320 7.2E-83 T 12-10-2018 TDE_2075 af2f425d930685f487cd1265e4baef4f 1004 Pfam PF00563 EAL domain 751 982 3.2E-41 T 12-10-2018 IPR001633 EAL domain TDE_2075 af2f425d930685f487cd1265e4baef4f 1004 SMART SM00052 745 987 6.5E-22 T 12-10-2018 IPR001633 EAL domain TDE_2075 af2f425d930685f487cd1265e4baef4f 1004 SMART SM00267 563 735 3.2E-25 T 12-10-2018 IPR000160 GGDEF domain TDE_2075 af2f425d930685f487cd1265e4baef4f 1004 SUPERFAMILY SSF141868 751 982 3.66E-48 T 12-10-2018 IPR035919 EAL domain superfamily TDE_2075 af2f425d930685f487cd1265e4baef4f 1004 Gene3D G3DSA:3.20.20.450 738 993 8.0E-47 T 12-10-2018 IPR035919 EAL domain superfamily TDE_2075 af2f425d930685f487cd1265e4baef4f 1004 SUPERFAMILY SSF55073 579 733 2.35E-30 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_2075 af2f425d930685f487cd1265e4baef4f 1004 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 570 729 6.9E-27 T 12-10-2018 IPR000160 GGDEF domain TDE_2075 af2f425d930685f487cd1265e4baef4f 1004 Gene3D G3DSA:3.30.70.270 562 735 2.2E-33 T 12-10-2018 TDE_2075 af2f425d930685f487cd1265e4baef4f 1004 Pfam PF00990 Diguanylate cyclase, GGDEF domain 575 727 2.3E-27 T 12-10-2018 IPR000160 GGDEF domain TDE_1037 9c4bfe9b6b203c96e5270a7ccfda4ede 303 Pfam PF13349 Putative adhesin 71 302 2.3E-24 T 12-10-2018 IPR025164 Putative adhesin TDE_1448 d55afd747c11f0f7eecbf58105fc15b4 271 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_1448 d55afd747c11f0f7eecbf58105fc15b4 271 SUPERFAMILY SSF53681 112 255 6.02E-24 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_1448 d55afd747c11f0f7eecbf58105fc15b4 271 Pfam PF01177 Asp/Glu/Hydantoin racemase 14 220 6.0E-24 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_1448 d55afd747c11f0f7eecbf58105fc15b4 271 Gene3D G3DSA:3.40.50.1860 12 246 4.7E-65 T 12-10-2018 TDE_1448 d55afd747c11f0f7eecbf58105fc15b4 271 Gene3D G3DSA:3.40.50.1860 99 212 4.7E-65 T 12-10-2018 TDE_1448 d55afd747c11f0f7eecbf58105fc15b4 271 SUPERFAMILY SSF53681 10 110 4.25E-27 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_1448 d55afd747c11f0f7eecbf58105fc15b4 271 TIGRFAM TIGR00067 glut_race: glutamate racemase 11 252 9.3E-54 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_1448 d55afd747c11f0f7eecbf58105fc15b4 271 Hamap MF_00258 Glutamate racemase [murI]. 7 264 27.84 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_1850 cc95b3c345f2c92c1884a9a98422b014 444 Pfam PF12704 MacB-like periplasmic core domain 18 243 9.4E-7 T 12-10-2018 IPR025857 MacB-like periplasmic core domain TDE_1850 cc95b3c345f2c92c1884a9a98422b014 444 Pfam PF02687 FtsX-like permease family 335 434 1.6E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 Pfam PF17191 RecG wedge domain 13 167 6.9E-22 T 12-10-2018 IPR033454 RecG, wedge domain TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 Gene3D G3DSA:2.40.50.140 46 142 1.3E-6 T 12-10-2018 TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 Gene3D G3DSA:3.40.50.300 227 454 6.9E-79 T 12-10-2018 TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 SMART SM00490 508 592 2.8E-21 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 SUPERFAMILY SSF50249 6 171 6.17E-35 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 Gene3D G3DSA:3.40.50.300 461 633 4.4E-55 T 12-10-2018 TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 669 7.4E-232 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 SMART SM00487 266 463 1.3E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 Pfam PF00271 Helicase conserved C-terminal domain 470 591 5.0E-18 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 Pfam PF00270 DEAD/DEAH box helicase 294 437 1.4E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TDE_2579 789f8914b6826ec76e06232b6be3dae6 678 SUPERFAMILY SSF52540 317 603 3.36E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0168 4528650dea0a0f6577ada3a9da61e946 133 SMART SM00345 15 74 1.3E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TDE_0168 4528650dea0a0f6577ada3a9da61e946 133 SUPERFAMILY SSF46785 7 92 2.85E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0168 4528650dea0a0f6577ada3a9da61e946 133 Gene3D G3DSA:1.10.10.10 8 128 6.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0168 4528650dea0a0f6577ada3a9da61e946 133 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.6E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 Gene3D G3DSA:3.50.50.60 9 308 1.4E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 120 128 9.7E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 9.7E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 215 231 9.7E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 68 78 9.7E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 162 186 9.7E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 259 280 9.7E-14 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 166 184 2.0E-16 T 12-10-2018 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 2.0E-16 T 12-10-2018 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.0E-16 T 12-10-2018 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 2.0E-16 T 12-10-2018 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 Gene3D G3DSA:3.50.50.60 134 265 1.4E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 307 3.8E-30 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_0135 3996c7bbed232e220f595be5d39f34b6 456 SUPERFAMILY SSF51905 9 327 4.17E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0783 f1e0bf9ee90a3347c357a65ec69db5f6 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 120 2.8E-38 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0783 f1e0bf9ee90a3347c357a65ec69db5f6 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 7 120 7.1E-42 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0783 f1e0bf9ee90a3347c357a65ec69db5f6 120 SUPERFAMILY SSF53137 8 118 5.23E-43 T 12-10-2018 TDE_0783 f1e0bf9ee90a3347c357a65ec69db5f6 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 7 120 26.16 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0783 f1e0bf9ee90a3347c357a65ec69db5f6 120 Gene3D G3DSA:3.30.420.100 6 120 5.7E-39 T 12-10-2018 TDE_2282 ef3809b26a8bc61649bf10d36a24dec3 345 SUPERFAMILY SSF55681 5 340 2.49E-54 T 12-10-2018 TDE_2282 ef3809b26a8bc61649bf10d36a24dec3 345 Pfam PF00152 tRNA synthetases class II (D, K and N) 5 336 7.4E-36 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_2282 ef3809b26a8bc61649bf10d36a24dec3 345 Gene3D G3DSA:3.30.930.10 1 341 1.5E-67 T 12-10-2018 TDE_1079 87e37bae115d28d41981c08e9aed0d24 201 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 1 37 2.7E-10 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 TDE_1079 87e37bae115d28d41981c08e9aed0d24 201 Gene3D G3DSA:3.40.930.10 48 201 3.6E-37 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TDE_1079 87e37bae115d28d41981c08e9aed0d24 201 SUPERFAMILY SSF55804 57 200 7.06E-33 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TDE_1079 87e37bae115d28d41981c08e9aed0d24 201 SUPERFAMILY SSF46955 2 42 4.39E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily TDE_1079 87e37bae115d28d41981c08e9aed0d24 201 Pfam PF12728 Helix-turn-helix domain 1 40 4.7E-12 T 12-10-2018 TDE_1079 87e37bae115d28d41981c08e9aed0d24 201 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 59 199 9.3E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain TDE_0790 16e4c65d75a3e727f87cd02d16172919 126 SUPERFAMILY SSF53137 12 126 4.58E-47 T 12-10-2018 TDE_0790 16e4c65d75a3e727f87cd02d16172919 126 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 126 31.362 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TDE_0790 16e4c65d75a3e727f87cd02d16172919 126 Gene3D G3DSA:3.30.420.80 1 126 6.1E-52 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 TDE_0790 16e4c65d75a3e727f87cd02d16172919 126 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 7 122 8.2E-54 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0790 16e4c65d75a3e727f87cd02d16172919 126 ProSitePatterns PS00054 Ribosomal protein S11 signature. 94 116 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site TDE_0790 16e4c65d75a3e727f87cd02d16172919 126 Pfam PF00411 Ribosomal protein S11 16 125 7.5E-44 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TDE_0790 16e4c65d75a3e727f87cd02d16172919 126 PIRSF PIRSF002131 1 126 5.6E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TDE_1381 2c43ed00bf4d50ed579f93b00a55a262 205 Gene3D G3DSA:3.30.2320.30 80 198 2.8E-7 T 12-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TDE_1381 2c43ed00bf4d50ed579f93b00a55a262 205 Hamap MF_00311 V-type proton ATPase subunit E [atpE]. 3 200 11.709 T 12-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TDE_1381 2c43ed00bf4d50ed579f93b00a55a262 205 Pfam PF01991 ATP synthase (E/31 kDa) subunit 20 193 4.9E-7 T 12-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TDE_1381 2c43ed00bf4d50ed579f93b00a55a262 205 SUPERFAMILY SSF160527 98 198 5.23E-11 T 12-10-2018 TDE_2148 1fb354d6429996a845a4f64e16d6eb39 449 Gene3D G3DSA:3.30.1330.60 312 449 4.1E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_2148 1fb354d6429996a845a4f64e16d6eb39 449 SUPERFAMILY SSF103088 332 446 7.19E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_2148 1fb354d6429996a845a4f64e16d6eb39 449 Pfam PF00691 OmpA family 351 440 4.4E-14 T 12-10-2018 IPR006665 OmpA-like domain TDE_0112 fc05b201546a9f95be99d1aa35fa9c22 186 Gene3D G3DSA:1.20.120.490 66 185 1.9E-26 T 12-10-2018 IPR024042 TM1646-like domain superfamily TDE_0112 fc05b201546a9f95be99d1aa35fa9c22 186 Pfam PF03885 Protein of unknown function (DUF327) 25 185 2.2E-38 T 12-10-2018 IPR005585 Protein of unknown function DUF327 TDE_0112 fc05b201546a9f95be99d1aa35fa9c22 186 SUPERFAMILY SSF158397 72 185 6.41E-26 T 12-10-2018 IPR024042 TM1646-like domain superfamily TDE_2359 3b803d8a2cfd281bb378411ee24d095c 209 Pfam PF02734 DAK2 domain 33 202 1.3E-38 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 TDE_2359 3b803d8a2cfd281bb378411ee24d095c 209 SMART SM01120 31 204 1.0E-48 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 TDE_2359 3b803d8a2cfd281bb378411ee24d095c 209 SUPERFAMILY SSF101473 1 206 1.7E-43 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 TDE_2359 3b803d8a2cfd281bb378411ee24d095c 209 Gene3D G3DSA:1.25.40.340 1 208 1.0E-46 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 TDE_0397 b64b8edacd4e2811f7b08edca00aaec3 325 SMART SM00382 42 237 1.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0397 b64b8edacd4e2811f7b08edca00aaec3 325 Pfam PF00005 ABC transporter 33 187 7.1E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0397 b64b8edacd4e2811f7b08edca00aaec3 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 304 3.1E-14 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0397 b64b8edacd4e2811f7b08edca00aaec3 325 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0397 b64b8edacd4e2811f7b08edca00aaec3 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 324 4.0E-23 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0397 b64b8edacd4e2811f7b08edca00aaec3 325 Gene3D G3DSA:3.40.50.300 2 325 1.2E-87 T 12-10-2018 TDE_0397 b64b8edacd4e2811f7b08edca00aaec3 325 SUPERFAMILY SSF52540 5 258 9.0E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 SUPERFAMILY SSF55073 1102 1258 2.12E-41 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1097 1252 1.2E-37 T 12-10-2018 IPR000160 GGDEF domain TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 SUPERFAMILY SSF52540 15 203 1.21E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 Gene3D G3DSA:3.30.70.270 1091 1261 1.1E-48 T 12-10-2018 TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 Gene3D G3DSA:1.25.40.10 497 717 3.6E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 SUPERFAMILY SSF48452 487 658 2.28E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 SUPERFAMILY SSF55781 1288 1428 3.63E-6 T 12-10-2018 TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1094 1255 3.3E-42 T 12-10-2018 IPR000160 GGDEF domain TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 SMART SM00028 518 551 10.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 SMART SM00028 599 632 12.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 SMART SM00028 839 872 76.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 Gene3D G3DSA:3.30.450.40 1281 1429 7.6E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily TDE_2582 146f4978a9a3766bf28de4a776c64701 1431 SMART SM00267 1087 1256 1.8E-47 T 12-10-2018 IPR000160 GGDEF domain TDE_0690 b5922bdcea3e2963d04b72dd2fe32527 366 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 358 40.929 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TDE_0690 b5922bdcea3e2963d04b72dd2fe32527 366 SUPERFAMILY SSF52402 1 243 4.19E-54 T 12-10-2018 TDE_0690 b5922bdcea3e2963d04b72dd2fe32527 366 Gene3D G3DSA:2.30.30.280 214 273 1.2E-19 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TDE_0690 b5922bdcea3e2963d04b72dd2fe32527 366 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 357 3.2E-109 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TDE_0690 b5922bdcea3e2963d04b72dd2fe32527 366 Gene3D G3DSA:3.40.50.620 1 208 2.2E-78 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_0690 b5922bdcea3e2963d04b72dd2fe32527 366 Gene3D G3DSA:2.40.30.10 274 364 3.4E-21 T 12-10-2018 TDE_0690 b5922bdcea3e2963d04b72dd2fe32527 366 Pfam PF03054 tRNA methyl transferase 1 357 1.1E-117 T 12-10-2018 TDE_1849 936bc02a276deaadf9b11866582c7ab3 255 Gene3D G3DSA:2.50.20.10 29 255 2.5E-37 T 12-10-2018 TDE_1849 936bc02a276deaadf9b11866582c7ab3 255 Pfam PF17131 Outer membrane lipoprotein-sorting protein 77 253 4.6E-34 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TDE_0477 32a24521e794fa32caf6fe907e593f85 435 SUPERFAMILY SSF53850 128 417 6.73E-20 T 12-10-2018 TDE_0477 32a24521e794fa32caf6fe907e593f85 435 Gene3D G3DSA:1.10.3910.10 1 73 4.7E-15 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily TDE_0477 32a24521e794fa32caf6fe907e593f85 435 SUPERFAMILY SSF140683 1 74 4.32E-16 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily TDE_0477 32a24521e794fa32caf6fe907e593f85 435 Pfam PF08984 Domain of unknown function (DUF1858) 6 59 7.1E-13 T 12-10-2018 IPR015077 Domain of unknown function DUF1858 TDE_0477 32a24521e794fa32caf6fe907e593f85 435 Gene3D G3DSA:3.40.190.10 199 396 2.2E-13 T 12-10-2018 TDE_0477 32a24521e794fa32caf6fe907e593f85 435 Gene3D G3DSA:3.40.190.10 226 349 2.2E-13 T 12-10-2018 TDE_0477 32a24521e794fa32caf6fe907e593f85 435 Pfam PF13343 Bacterial extracellular solute-binding protein 167 415 9.7E-77 T 12-10-2018 TDE_2413 ce77b21b2f33152b639960d9604522ca 221 SUPERFAMILY SSF143100 3 43 1.23E-5 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like TDE_1270 103c996b69db94b8515121143c429967 144 SUPERFAMILY SSF82784 2 139 1.06E-31 T 12-10-2018 IPR036102 OsmC/Ohr superfamily TDE_1270 103c996b69db94b8515121143c429967 144 Pfam PF02566 OsmC-like protein 35 137 5.4E-20 T 12-10-2018 IPR003718 OsmC/Ohr family TDE_1270 103c996b69db94b8515121143c429967 144 Gene3D G3DSA:3.30.300.20 1 143 7.6E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_0057 5ac1ab7af9716cd093393545d0f4a00b 328 SUPERFAMILY SSF52540 6 165 2.6E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0057 5ac1ab7af9716cd093393545d0f4a00b 328 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 317 26.993 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TDE_0057 5ac1ab7af9716cd093393545d0f4a00b 328 Gene3D G3DSA:3.40.50.300 8 302 1.2E-85 T 12-10-2018 TDE_0057 5ac1ab7af9716cd093393545d0f4a00b 328 Pfam PF01715 IPP transferase 53 300 2.9E-71 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TDE_0057 5ac1ab7af9716cd093393545d0f4a00b 328 Gene3D G3DSA:1.10.20.140 127 198 1.2E-85 T 12-10-2018 TDE_0057 5ac1ab7af9716cd093393545d0f4a00b 328 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 302 1.9E-77 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TDE_0921 89c8055a43c6e0c0f0ee2aa42989dda1 579 Pfam PF00005 ABC transporter 359 508 2.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0921 89c8055a43c6e0c0f0ee2aa42989dda1 579 Pfam PF00664 ABC transporter transmembrane region 27 293 1.9E-34 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0921 89c8055a43c6e0c0f0ee2aa42989dda1 579 Gene3D G3DSA:1.20.1560.10 1 333 4.9E-57 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0921 89c8055a43c6e0c0f0ee2aa42989dda1 579 SUPERFAMILY SSF52540 337 578 1.28E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0921 89c8055a43c6e0c0f0ee2aa42989dda1 579 Gene3D G3DSA:3.40.50.300 340 579 5.8E-79 T 12-10-2018 TDE_0921 89c8055a43c6e0c0f0ee2aa42989dda1 579 SMART SM00382 368 570 2.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0921 89c8055a43c6e0c0f0ee2aa42989dda1 579 SUPERFAMILY SSF90123 7 328 7.85E-53 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2034 5b04f9d3e8411d4ffd599c5ab1b0c858 385 Gene3D G3DSA:3.40.50.2000 1 202 2.4E-42 T 12-10-2018 TDE_2034 5b04f9d3e8411d4ffd599c5ab1b0c858 385 Pfam PF00534 Glycosyl transferases group 1 200 359 1.7E-38 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 TDE_2034 5b04f9d3e8411d4ffd599c5ab1b0c858 385 SUPERFAMILY SSF53756 2 384 3.46E-91 T 12-10-2018 TDE_2034 5b04f9d3e8411d4ffd599c5ab1b0c858 385 Pfam PF13439 Glycosyltransferase Family 4 14 184 2.0E-34 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TDE_2034 5b04f9d3e8411d4ffd599c5ab1b0c858 385 Gene3D G3DSA:3.40.50.2000 203 370 6.2E-44 T 12-10-2018 TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Pfam PF00990 Diguanylate cyclase, GGDEF domain 822 980 2.8E-44 T 12-10-2018 IPR000160 GGDEF domain TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 818 984 8.6E-49 T 12-10-2018 IPR000160 GGDEF domain TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 SUPERFAMILY SSF55073 826 986 1.57E-41 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 SMART SM00267 810 985 1.6E-58 T 12-10-2018 IPR000160 GGDEF domain TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 SUPERFAMILY SSF50998 110 570 3.3E-20 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Gene3D G3DSA:2.60.40.10 653 773 1.0E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Pfam PF07494 Two component regulator propeller 301 323 6.1E-4 T 12-10-2018 IPR011110 Two component regulator propeller TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Pfam PF07494 Two component regulator propeller 534 557 0.0033 T 12-10-2018 IPR011110 Two component regulator propeller TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Pfam PF07494 Two component regulator propeller 125 144 0.0022 T 12-10-2018 IPR011110 Two component regulator propeller TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Pfam PF07494 Two component regulator propeller 34 54 6.9E-4 T 12-10-2018 IPR011110 Two component regulator propeller TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Gene3D G3DSA:2.130.10.10 340 648 3.4E-53 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Pfam PF07495 Y_Y_Y domain 707 762 2.2E-14 T 12-10-2018 IPR011123 Two component regulator three Y TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Gene3D G3DSA:2.130.10.10 25 331 8.1E-57 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TDE_1685 7d1f2d3d8f7140fc4acb44d557d41216 987 Gene3D G3DSA:3.30.70.270 806 986 1.9E-49 T 12-10-2018 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Hamap MF_00952 DNA topoisomerase 1 [topA]. 21 657 52.689 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Gene3D G3DSA:3.40.50.140 15 153 8.8E-50 T 12-10-2018 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Gene3D G3DSA:2.70.20.10 203 472 1.3E-151 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 674 706 4.1E-6 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 593 628 4.2E-14 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 631 670 2.1E-9 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 SMART SM00493 21 121 4.1E-27 T 12-10-2018 IPR006171 TOPRIM domain TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 5.2E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 311 320 5.2E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 5.2E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 181 199 5.2E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 95 108 5.2E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Gene3D G3DSA:1.10.460.10 154 565 1.3E-151 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 298 320 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Gene3D G3DSA:3.30.65.10 579 634 2.7E-15 T 12-10-2018 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Pfam PF01751 Toprim domain 23 132 1.3E-27 T 12-10-2018 IPR006171 TOPRIM domain TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Gene3D G3DSA:1.10.290.10 269 402 1.3E-151 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 SMART SM00436 123 211 8.2E-53 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 SUPERFAMILY SSF57783 586 629 8.33E-14 T 12-10-2018 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 SMART SM00437 261 525 4.4E-111 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 SUPERFAMILY SSF56712 22 604 1.05E-186 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 Pfam PF01131 DNA topoisomerase 147 562 4.9E-127 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TDE_1208 f43de52510af6109e7ea8f1c94c6f094 721 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 23 627 3.9E-246 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 TDE_1551 6dce68c268954b7a06e4cc68609df907 331 Gene3D G3DSA:3.30.930.10 1 243 1.8E-75 T 12-10-2018 TDE_1551 6dce68c268954b7a06e4cc68609df907 331 SUPERFAMILY SSF55681 1 243 2.49E-73 T 12-10-2018 TDE_1551 6dce68c268954b7a06e4cc68609df907 331 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 323 1.7E-93 T 12-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 TDE_1551 6dce68c268954b7a06e4cc68609df907 331 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 245 328 2.7E-23 T 12-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 TDE_1551 6dce68c268954b7a06e4cc68609df907 331 Gene3D G3DSA:3.30.390.50 244 330 2.6E-24 T 12-10-2018 TDE_1551 6dce68c268954b7a06e4cc68609df907 331 Pfam PF03099 Biotin/lipoate A/B protein ligase family 47 154 2.3E-6 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TDE_1551 6dce68c268954b7a06e4cc68609df907 331 SUPERFAMILY SSF82649 245 330 9.94E-22 T 12-10-2018 TDE_0752 8e8674db145f0a92121b7d39f2743560 609 Pfam PF13365 Trypsin-like peptidase domain 70 210 4.3E-10 T 12-10-2018 TDE_0752 8e8674db145f0a92121b7d39f2743560 609 SUPERFAMILY SSF50494 46 248 7.11E-23 T 12-10-2018 IPR009003 Peptidase S1, PA clan TDE_0752 8e8674db145f0a92121b7d39f2743560 609 Gene3D G3DSA:2.40.10.10 143 250 2.8E-14 T 12-10-2018 TDE_0752 8e8674db145f0a92121b7d39f2743560 609 Gene3D G3DSA:2.40.10.10 26 136 1.1E-10 T 12-10-2018 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 Pfam PF01479 S4 domain 6 50 3.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 SMART SM00363 5 73 4.2E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 Gene3D G3DSA:3.10.290.10 3 66 3.4E-18 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 SUPERFAMILY SSF55120 64 230 1.04E-33 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 Pfam PF00849 RNA pseudouridylate synthase 66 193 3.1E-15 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 Gene3D G3DSA:3.30.70.1560 133 212 1.2E-43 T 12-10-2018 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 225 1.8E-38 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 SUPERFAMILY SSF55174 4 89 1.68E-16 T 12-10-2018 TDE_0875 2949c0882015f256ef1ae6a44b590225 234 Gene3D G3DSA:3.30.70.580 67 229 1.2E-43 T 12-10-2018 TDE_0172 0f09c1c623968a7a1bb6e5d307836085 269 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 256 8.4E-67 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TDE_0172 0f09c1c623968a7a1bb6e5d307836085 269 Pfam PF02673 Bacitracin resistance protein BacA 6 258 7.7E-72 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TDE_0172 0f09c1c623968a7a1bb6e5d307836085 269 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 16.564 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TDE_1111 d6e3952d5c2b9a11867153d9bb47ea94 409 SUPERFAMILY SSF118215 4 395 5.62E-42 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TDE_1111 d6e3952d5c2b9a11867153d9bb47ea94 409 Pfam PF00375 Sodium:dicarboxylate symporter family 4 395 4.4E-34 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 TDE_1111 d6e3952d5c2b9a11867153d9bb47ea94 409 Gene3D G3DSA:1.10.3860.10 1 406 2.8E-36 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TDE_0225 86ee67b94c82d716b40484a9d9eb5bee 90 SUPERFAMILY SSF143120 4 81 3.53E-15 T 12-10-2018 IPR036165 YefM-like superfamily TDE_0225 86ee67b94c82d716b40484a9d9eb5bee 90 Gene3D G3DSA:3.40.1620.40 3 68 3.0E-6 T 12-10-2018 TDE_0225 86ee67b94c82d716b40484a9d9eb5bee 90 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 72 1.1E-8 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 SUPERFAMILY SSF55326 429 616 1.14E-46 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 Pfam PF00586 AIR synthase related protein, N-terminal domain 108 229 1.8E-16 T 12-10-2018 IPR016188 PurM-like, N-terminal domain TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 Pfam PF00586 AIR synthase related protein, N-terminal domain 484 610 3.4E-9 T 12-10-2018 IPR016188 PurM-like, N-terminal domain TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 SUPERFAMILY SSF56042 620 763 3.29E-24 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 Gene3D G3DSA:3.90.650.10 618 766 1.6E-26 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 95 760 1.0E-165 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 SUPERFAMILY SSF56042 239 461 3.14E-45 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 Gene3D G3DSA:3.30.1330.10 46 232 1.2E-54 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 Gene3D G3DSA:3.30.1330.10 429 612 2.0E-45 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 Pfam PF02769 AIR synthase related protein, C-terminal domain 623 765 3.8E-13 T 12-10-2018 IPR010918 PurM-like, C-terminal domain TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 Pfam PF02769 AIR synthase related protein, C-terminal domain 241 392 2.9E-21 T 12-10-2018 IPR010918 PurM-like, C-terminal domain TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 766 191.132 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 SUPERFAMILY SSF55326 20 237 1.13E-42 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TDE_1279 1c6b2b0fe74d8388d488606b2792d9b0 766 Gene3D G3DSA:3.90.650.10 233 409 1.8E-46 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TDE_1251 41ab19e624891bf4ae5411eef3891708 322 SUPERFAMILY SSF53300 78 265 2.82E-21 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_1251 41ab19e624891bf4ae5411eef3891708 322 Gene3D G3DSA:3.40.50.410 75 281 1.6E-36 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_1251 41ab19e624891bf4ae5411eef3891708 322 Pfam PF00092 von Willebrand factor type A domain 84 237 4.7E-15 T 12-10-2018 IPR002035 von Willebrand factor, type A TDE_1251 41ab19e624891bf4ae5411eef3891708 322 SMART SM00327 81 255 1.1E-11 T 12-10-2018 IPR002035 von Willebrand factor, type A TDE_1927 05c3feca9272e18633a39f063165d5e6 584 Gene3D G3DSA:3.30.930.10 391 580 1.4E-41 T 12-10-2018 TDE_1927 05c3feca9272e18633a39f063165d5e6 584 Hamap MF_00284 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 577 30.484 T 12-10-2018 IPR022918 Phenylalanine-tRNA ligase beta chain 2, bacterial/archaeal GO:0004826 KEGG: 00970+6.1.1.20 TDE_1927 05c3feca9272e18633a39f063165d5e6 584 Gene3D G3DSA:3.30.56.10 1 89 9.8E-20 T 12-10-2018 TDE_1927 05c3feca9272e18633a39f063165d5e6 584 Pfam PF03484 tRNA synthetase B5 domain 311 370 3.9E-12 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TDE_1927 05c3feca9272e18633a39f063165d5e6 584 SMART SM00874 306 374 8.1E-12 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TDE_1927 05c3feca9272e18633a39f063165d5e6 584 Gene3D G3DSA:3.50.40.10 101 299 4.7E-52 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 TDE_1927 05c3feca9272e18633a39f063165d5e6 584 SUPERFAMILY SSF46955 310 370 1.56E-10 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily TDE_1927 05c3feca9272e18633a39f063165d5e6 584 Gene3D G3DSA:3.30.56.10 307 372 2.5E-15 T 12-10-2018 TDE_1927 05c3feca9272e18633a39f063165d5e6 584 TIGRFAM TIGR00471 pheT_arch: phenylalanine--tRNA ligase, beta subunit 1 580 5.0E-157 T 12-10-2018 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TDE_1927 05c3feca9272e18633a39f063165d5e6 584 SUPERFAMILY SSF55681 390 580 6.46E-39 T 12-10-2018 TDE_1927 05c3feca9272e18633a39f063165d5e6 584 SMART SM00873 120 280 6.7E-5 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TDE_0222 89437ae88c60ec2f36e97d59631fba12 174 SUPERFAMILY SSF55729 7 146 6.98E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_0222 89437ae88c60ec2f36e97d59631fba12 174 Gene3D G3DSA:3.40.630.30 2 145 6.5E-20 T 12-10-2018 TDE_0222 89437ae88c60ec2f36e97d59631fba12 174 Pfam PF13508 Acetyltransferase (GNAT) domain 50 139 5.1E-10 T 12-10-2018 IPR000182 GNAT domain TDE_0435 1a5bb507f74745d1eecb49cfc03d912e 567 Gene3D G3DSA:3.40.50.300 97 293 1.8E-45 T 12-10-2018 TDE_0435 1a5bb507f74745d1eecb49cfc03d912e 567 Pfam PF00271 Helicase conserved C-terminal domain 317 421 3.5E-16 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_0435 1a5bb507f74745d1eecb49cfc03d912e 567 SMART SM00487 53 306 2.2E-16 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_0435 1a5bb507f74745d1eecb49cfc03d912e 567 Gene3D G3DSA:3.40.50.300 300 507 1.8E-43 T 12-10-2018 TDE_0435 1a5bb507f74745d1eecb49cfc03d912e 567 SMART SM00490 339 422 6.0E-21 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_0435 1a5bb507f74745d1eecb49cfc03d912e 567 SUPERFAMILY SSF52540 152 439 1.43E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0435 1a5bb507f74745d1eecb49cfc03d912e 567 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 125 509 7.1E-79 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 TDE_0435 1a5bb507f74745d1eecb49cfc03d912e 567 Pfam PF00270 DEAD/DEAH box helicase 128 277 1.0E-10 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TDE_1469 ecf8bb34fcfc79ccae52edb88bd03adb 143 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 6 131 4.9E-35 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TDE_1469 ecf8bb34fcfc79ccae52edb88bd03adb 143 Gene3D G3DSA:3.40.50.300 1 141 1.1E-41 T 12-10-2018 TDE_1469 ecf8bb34fcfc79ccae52edb88bd03adb 143 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 6 131 1.4E-36 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TDE_1469 ecf8bb34fcfc79ccae52edb88bd03adb 143 SUPERFAMILY SSF52540 16 124 1.96E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0018 b72fd340147e33a90caf4741189f498f 166 Pfam PF01476 LysM domain 70 121 1.6E-7 T 12-10-2018 IPR018392 LysM domain TDE_0018 b72fd340147e33a90caf4741189f498f 166 SMART SM00257 69 121 7.2E-5 T 12-10-2018 IPR018392 LysM domain TDE_0018 b72fd340147e33a90caf4741189f498f 166 Gene3D G3DSA:3.10.350.10 59 124 8.3E-9 T 12-10-2018 IPR036779 LysM domain superfamily TDE_2181 6aa92a6ace8d366d0acd1731ce1b08a4 346 SUPERFAMILY SSF48317 14 197 2.35E-31 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TDE_2181 6aa92a6ace8d366d0acd1731ce1b08a4 346 Gene3D G3DSA:1.20.144.10 96 228 6.1E-21 T 12-10-2018 TDE_2181 6aa92a6ace8d366d0acd1731ce1b08a4 346 Pfam PF01569 PAP2 superfamily 66 197 1.4E-20 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TDE_2181 6aa92a6ace8d366d0acd1731ce1b08a4 346 SMART SM00014 64 194 8.3E-43 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TDE_1595 fcbf92536e1a78667769ce3df14dcdca 363 PIRSF PIRSF026782 10 363 6.9E-122 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TDE_1595 fcbf92536e1a78667769ce3df14dcdca 363 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 21 358 1.7E-67 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TDE_1595 fcbf92536e1a78667769ce3df14dcdca 363 Gene3D G3DSA:3.30.2110.10 16 187 2.3E-47 T 12-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TDE_1595 fcbf92536e1a78667769ce3df14dcdca 363 Pfam PF01888 CbiD 14 273 3.8E-87 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TDE_1595 fcbf92536e1a78667769ce3df14dcdca 363 SUPERFAMILY SSF111342 4 291 9.55E-79 T 12-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TDE_1595 fcbf92536e1a78667769ce3df14dcdca 363 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 14 354 27.489 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TDE_1894 a6600b0763bbba860abf3478522b87cb 282 SUPERFAMILY SSF54862 209 279 3.11E-14 T 12-10-2018 TDE_1894 a6600b0763bbba860abf3478522b87cb 282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_1894 a6600b0763bbba860abf3478522b87cb 282 SUPERFAMILY SSF54862 40 191 5.03E-15 T 12-10-2018 TDE_1894 a6600b0763bbba860abf3478522b87cb 282 Gene3D G3DSA:3.30.70.20 122 193 2.4E-14 T 12-10-2018 TDE_1894 a6600b0763bbba860abf3478522b87cb 282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 217 228 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_1894 a6600b0763bbba860abf3478522b87cb 282 Pfam PF04060 Putative Fe-S cluster 44 76 2.2E-14 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 TDE_1894 a6600b0763bbba860abf3478522b87cb 282 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 193 1.4E-25 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 TDE_1894 a6600b0763bbba860abf3478522b87cb 282 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 192 28.07 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 TDE_1894 a6600b0763bbba860abf3478522b87cb 282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_1894 a6600b0763bbba860abf3478522b87cb 282 Gene3D G3DSA:3.30.70.20 213 264 5.0E-11 T 12-10-2018 TDE_1894 a6600b0763bbba860abf3478522b87cb 282 Pfam PF12838 4Fe-4S dicluster domain 140 182 3.1E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_1894 a6600b0763bbba860abf3478522b87cb 282 Gene3D G3DSA:3.20.20.20 34 99 2.5E-13 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TDE_0945 b6b3e0d15b924b0f7501a0f00ef76912 370 Gene3D G3DSA:3.90.1580.10 101 370 7.2E-77 T 12-10-2018 TDE_0945 b6b3e0d15b924b0f7501a0f00ef76912 370 Pfam PF03781 Sulfatase-modifying factor enzyme 1 108 367 1.8E-39 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_0945 b6b3e0d15b924b0f7501a0f00ef76912 370 SUPERFAMILY SSF56436 106 368 2.59E-52 T 12-10-2018 IPR016187 C-type lectin fold TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 304 327 9.2E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 453 466 9.2E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 271 299 9.2E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 408 436 9.2E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 PRINTS PR01047 Threonyl-tRNA synthetase signature 480 492 9.2E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 SMART SM00863 110 161 6.3E-20 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 SUPERFAMILY SSF55186 11 183 2.88E-55 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 Gene3D G3DSA:3.30.980.10 13 164 2.1E-62 T 12-10-2018 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 264 474 9.0E-43 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 Pfam PF03129 Anticodon binding domain 487 575 3.7E-19 T 12-10-2018 IPR004154 Anticodon-binding TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 SUPERFAMILY SSF52954 476 579 8.91E-28 T 12-10-2018 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 Gene3D G3DSA:3.30.930.10 165 477 3.5E-123 T 12-10-2018 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 9 579 33.277 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 SUPERFAMILY SSF55681 185 472 2.79E-91 T 12-10-2018 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 110 161 2.9E-10 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 Gene3D G3DSA:3.30.54.20 73 127 2.1E-62 T 12-10-2018 TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 Gene3D G3DSA:3.40.50.800 478 583 4.3E-27 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily TDE_1090 5b3f3927fb789541d67b8aaa8c8c0bfc 585 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 15 576 1.8E-207 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TDE_1248 51f73047b048594d2e464c742b5fca80 314 Pfam PF01882 Protein of unknown function DUF58 37 111 1.2E-19 T 12-10-2018 IPR002881 Domain of unknown function DUF58 TDE_1248 51f73047b048594d2e464c742b5fca80 314 SUPERFAMILY SSF53300 73 192 4.08E-9 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_1123 7b26b5df98bed138011f57a383e2356b 561 Gene3D G3DSA:3.60.40.10 317 560 2.5E-47 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_1123 7b26b5df98bed138011f57a383e2356b 561 SUPERFAMILY SSF55781 213 317 9.81E-12 T 12-10-2018 TDE_1123 7b26b5df98bed138011f57a383e2356b 561 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 370 560 1.0E-37 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_1123 7b26b5df98bed138011f57a383e2356b 561 SMART SM00331 344 560 4.2E-28 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_1123 7b26b5df98bed138011f57a383e2356b 561 Gene3D G3DSA:3.30.450.40 130 316 1.0E-13 T 12-10-2018 IPR029016 GAF-like domain superfamily TDE_1620 7214bfde788c28c34524f6029ba8c347 667 Gene3D G3DSA:3.40.50.300 24 155 3.8E-9 T 12-10-2018 TDE_1620 7214bfde788c28c34524f6029ba8c347 667 Gene3D G3DSA:3.40.50.300 188 329 1.7E-12 T 12-10-2018 TDE_1620 7214bfde788c28c34524f6029ba8c347 667 SUPERFAMILY SSF52540 38 649 3.17E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1620 7214bfde788c28c34524f6029ba8c347 667 Pfam PF13245 AAA domain 38 281 1.6E-11 T 12-10-2018 TDE_1087 6026650c7674ab114d1496060606a2e5 187 TIGRFAM TIGR02173 cyt_kin_arch: putative cytidylate kinase 15 177 1.7E-37 T 12-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TDE_1087 6026650c7674ab114d1496060606a2e5 187 Gene3D G3DSA:3.40.50.300 3 184 8.3E-36 T 12-10-2018 TDE_1087 6026650c7674ab114d1496060606a2e5 187 Hamap MF_00239 Cytidylate kinase [cmk]. 14 184 38.729 T 12-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TDE_1087 6026650c7674ab114d1496060606a2e5 187 Pfam PF13189 Cytidylate kinase-like family 79 165 2.7E-11 T 12-10-2018 TDE_1087 6026650c7674ab114d1496060606a2e5 187 SUPERFAMILY SSF52540 15 177 1.15E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 Gene3D G3DSA:3.40.50.1980 181 311 3.1E-50 T 12-10-2018 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00691 Adhesin B signature 192 209 5.1E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00691 Adhesin B signature 81 100 5.1E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00691 Adhesin B signature 62 80 5.1E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00691 Adhesin B signature 241 258 5.1E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00691 Adhesin B signature 37 58 5.1E-26 T 12-10-2018 IPR006129 Adhesin B GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 SUPERFAMILY SSF53807 36 311 4.61E-80 T 12-10-2018 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00690 Adhesin family signature 245 263 1.2E-44 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00690 Adhesin family signature 81 98 1.2E-44 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00690 Adhesin family signature 37 55 1.2E-44 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00690 Adhesin family signature 68 81 1.2E-44 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00690 Adhesin family signature 276 295 1.2E-44 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 PRINTS PR00690 Adhesin family signature 192 213 1.2E-44 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 307 9.4E-71 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TDE_1226 a9b076f52b912d44b846e5e1801e8302 312 Gene3D G3DSA:3.40.50.1980 36 178 6.3E-45 T 12-10-2018 TDE_2584 a3603076b3c52cac2e0c62579591d153 483 Pfam PF03577 Peptidase family C69 13 412 1.6E-155 T 12-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 TDE_2584 a3603076b3c52cac2e0c62579591d153 483 Gene3D G3DSA:3.60.60.10 13 229 8.1E-8 T 12-10-2018 TDE_0671 7ddb16577e30a3e2daddcd10b15df0e7 125 Gene3D G3DSA:3.40.50.1010 1 120 4.1E-8 T 12-10-2018 TDE_0671 7ddb16577e30a3e2daddcd10b15df0e7 125 Pfam PF01850 PIN domain 3 119 1.1E-15 T 12-10-2018 IPR002716 PIN domain TDE_0671 7ddb16577e30a3e2daddcd10b15df0e7 125 SUPERFAMILY SSF88723 2 125 8.69E-18 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_0348 4c0b510d76dc7c73ce4291fd9859e556 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 9.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0348 4c0b510d76dc7c73ce4291fd9859e556 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 9.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0348 4c0b510d76dc7c73ce4291fd9859e556 198 SUPERFAMILY SSF46689 7 78 3.85E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_0348 4c0b510d76dc7c73ce4291fd9859e556 198 Gene3D G3DSA:1.10.357.10 3 193 8.8E-24 T 12-10-2018 TDE_0348 4c0b510d76dc7c73ce4291fd9859e556 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 3.1E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0706 de8ce39d24c90a154342d6071b6afbcf 370 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 246 252 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TDE_0706 de8ce39d24c90a154342d6071b6afbcf 370 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 19 331 3.9E-22 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TDE_0706 de8ce39d24c90a154342d6071b6afbcf 370 SUPERFAMILY SSF53335 14 331 1.62E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0706 de8ce39d24c90a154342d6071b6afbcf 370 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 243 255 4.1E-8 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TDE_0706 de8ce39d24c90a154342d6071b6afbcf 370 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 69 82 4.1E-8 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TDE_0706 de8ce39d24c90a154342d6071b6afbcf 370 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 19 35 4.1E-8 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TDE_2593 4493d41c86f5b663d4d77c1fb4e7a9ae 378 Gene3D G3DSA:1.10.8.60 312 372 3.3E-14 T 12-10-2018 TDE_2593 4493d41c86f5b663d4d77c1fb4e7a9ae 378 Gene3D G3DSA:3.40.50.300 127 311 8.8E-56 T 12-10-2018 TDE_2593 4493d41c86f5b663d4d77c1fb4e7a9ae 378 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TDE_2593 4493d41c86f5b663d4d77c1fb4e7a9ae 378 SMART SM00382 162 305 4.8E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2593 4493d41c86f5b663d4d77c1fb4e7a9ae 378 SUPERFAMILY SSF52540 141 369 5.33E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2593 4493d41c86f5b663d4d77c1fb4e7a9ae 378 Pfam PF00158 Sigma-54 interaction domain 142 305 3.4E-55 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TDE_2593 4493d41c86f5b663d4d77c1fb4e7a9ae 378 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 347 356 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TDE_2593 4493d41c86f5b663d4d77c1fb4e7a9ae 378 SUPERFAMILY SSF52172 26 187 1.59E-6 T 12-10-2018 IPR011006 CheY-like superfamily TDE_0317 21c4a031b9662c31df6d6840503e85ff 126 SUPERFAMILY SSF144020 3 51 1.03E-5 T 12-10-2018 IPR024064 FdhE-like superfamily TDE_0317 21c4a031b9662c31df6d6840503e85ff 126 Pfam PF09862 Protein of unknown function (DUF2089) 8 117 6.3E-40 T 12-10-2018 IPR018658 Protein of unknown function DUF2089 TDE_1371 c2365e4eee190ca4dad58756bd587fc9 623 SUPERFAMILY SSF50249 564 621 3.08E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1371 c2365e4eee190ca4dad58756bd587fc9 623 Gene3D G3DSA:1.10.10.10 167 235 5.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1371 c2365e4eee190ca4dad58756bd587fc9 623 SUPERFAMILY SSF50249 190 562 2.7E-76 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1371 c2365e4eee190ca4dad58756bd587fc9 623 Pfam PF00773 RNB domain 473 518 1.6E-8 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TDE_1371 c2365e4eee190ca4dad58756bd587fc9 623 SMART SM00955 243 520 5.4E-64 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TDE_1371 c2365e4eee190ca4dad58756bd587fc9 623 Pfam PF00773 RNB domain 244 457 1.8E-37 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TDE_0756 3f1d9d12bf8400aa466ebf9cb06b53a5 253 Pfam PF00005 ABC transporter 18 167 6.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0756 3f1d9d12bf8400aa466ebf9cb06b53a5 253 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0756 3f1d9d12bf8400aa466ebf9cb06b53a5 253 SUPERFAMILY SSF52540 4 221 1.39E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0756 3f1d9d12bf8400aa466ebf9cb06b53a5 253 Gene3D G3DSA:3.40.50.300 2 252 5.0E-70 T 12-10-2018 TDE_0756 3f1d9d12bf8400aa466ebf9cb06b53a5 253 SMART SM00382 27 211 9.6E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2323 65a746407bf238f93e280cfddbb76b1a 406 Pfam PF00924 Mechanosensitive ion channel 142 394 8.0E-40 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TDE_2323 65a746407bf238f93e280cfddbb76b1a 406 SUPERFAMILY SSF50182 184 250 3.6E-9 T 12-10-2018 IPR010920 LSM domain superfamily TDE_0185 9f3afac5b57c9e1da105e7974bca86bc 585 SUPERFAMILY SSF52540 337 580 7.92E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0185 9f3afac5b57c9e1da105e7974bca86bc 585 SMART SM00382 367 556 3.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0185 9f3afac5b57c9e1da105e7974bca86bc 585 Gene3D G3DSA:3.40.50.300 339 584 1.1E-62 T 12-10-2018 TDE_0185 9f3afac5b57c9e1da105e7974bca86bc 585 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0185 9f3afac5b57c9e1da105e7974bca86bc 585 Pfam PF00005 ABC transporter 358 508 1.6E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0185 9f3afac5b57c9e1da105e7974bca86bc 585 SUPERFAMILY SSF90123 17 308 4.58E-7 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2085 b35073416a0dc18263e39e1ebe0c915a 231 Pfam PF00696 Amino acid kinase family 1 207 3.5E-22 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TDE_2085 b35073416a0dc18263e39e1ebe0c915a 231 PIRSF PIRSF005650 1 231 1.4E-50 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 TDE_2085 b35073416a0dc18263e39e1ebe0c915a 231 SUPERFAMILY SSF53633 2 230 3.53E-31 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TDE_2085 b35073416a0dc18263e39e1ebe0c915a 231 TIGRFAM TIGR02076 pyrH_arch: putative uridylate kinase 4 230 5.2E-56 T 12-10-2018 IPR011818 Uridylate kinase, archaeal/spirochete, putative GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 TDE_2085 b35073416a0dc18263e39e1ebe0c915a 231 Gene3D G3DSA:3.40.1160.10 3 230 8.9E-46 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TDE_0114 376372a3bb1f1b267d57444d181bf831 139 Gene3D G3DSA:1.10.60.10 77 133 3.7E-18 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 TDE_0114 376372a3bb1f1b267d57444d181bf831 139 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 11 67 8.5E-14 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 TDE_0114 376372a3bb1f1b267d57444d181bf831 139 Gene3D G3DSA:1.10.10.10 11 76 7.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0114 376372a3bb1f1b267d57444d181bf831 139 SUPERFAMILY SSF46785 11 71 2.73E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0114 376372a3bb1f1b267d57444d181bf831 139 SMART SM00529 33 133 1.2E-27 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 TDE_0114 376372a3bb1f1b267d57444d181bf831 139 SUPERFAMILY SSF47979 72 129 1.83E-16 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 TDE_0114 376372a3bb1f1b267d57444d181bf831 139 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 72 130 1.0E-17 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 381 2.1E-75 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 PRINTS PR01755 Bacterial translocase SecF protein signature 297 315 3.3E-25 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 3.3E-25 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 PRINTS PR01755 Bacterial translocase SecF protein signature 249 263 3.3E-25 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 PRINTS PR01755 Bacterial translocase SecF protein signature 329 344 3.3E-25 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 200 378 5.3E-56 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 SUPERFAMILY SSF82866 193 390 1.44E-39 T 12-10-2018 TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 Gene3D G3DSA:1.20.1640.10 200 400 2.4E-15 T 12-10-2018 TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 Pfam PF02355 Protein export membrane protein 214 387 2.7E-62 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TDE_0680 c68f7d7230c41db3bbcfc14392b7056a 413 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 392 30.274 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TDE_1667 d25bb3015d7e8daa08db0c0ea4df5457 352 Gene3D G3DSA:3.40.50.10470 149 350 2.9E-70 T 12-10-2018 TDE_1667 d25bb3015d7e8daa08db0c0ea4df5457 352 Pfam PF01008 Initiation factor 2 subunit family 84 350 4.8E-38 T 12-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 TDE_1667 d25bb3015d7e8daa08db0c0ea4df5457 352 Gene3D G3DSA:1.20.120.420 48 148 2.9E-70 T 12-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TDE_1667 d25bb3015d7e8daa08db0c0ea4df5457 352 SUPERFAMILY SSF100950 9 352 3.85E-74 T 12-10-2018 IPR037171 NagB/RpiA transferase-like TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 3.8E-26 T 12-10-2018 IPR000362 Fumarate lyase family TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 3.8E-26 T 12-10-2018 IPR000362 Fumarate lyase family TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 3.8E-26 T 12-10-2018 IPR000362 Fumarate lyase family TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.8E-26 T 12-10-2018 IPR000362 Fumarate lyase family TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 SUPERFAMILY SSF48557 1 458 4.56E-141 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 Pfam PF10415 Fumarase C C-terminus 406 459 1.1E-22 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 Gene3D G3DSA:1.10.40.30 406 457 2.2E-21 T 12-10-2018 TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 Gene3D G3DSA:1.20.200.10 138 405 4.6E-103 T 12-10-2018 TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 Pfam PF00206 Lyase 9 340 1.3E-89 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TDE_1993 1fbe99f6055588ed956be600f3cf12b2 463 Gene3D G3DSA:1.10.275.10 1 137 8.3E-58 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 SUPERFAMILY SSF52172 1 117 4.7E-28 T 12-10-2018 IPR011006 CheY-like superfamily TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 SUPERFAMILY SSF46894 135 199 3.74E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 197 4.2E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 2.5E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 2.5E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 2.5E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 Gene3D G3DSA:3.40.50.12740 1 201 1.6E-60 T 12-10-2018 TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 SMART SM00448 1 112 8.0E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 Pfam PF00072 Response regulator receiver domain 3 111 2.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 SMART SM00421 141 198 4.2E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_0149 81b8f81d6bdcdc45b8fe5e61f3edaceb 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TDE_2569 eb6cf23f752830235a5c21bd7ed7e897 356 PIRSF PIRSF001361 1 356 9.1E-136 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 TDE_2569 eb6cf23f752830235a5c21bd7ed7e897 356 SUPERFAMILY SSF51569 7 353 1.47E-111 T 12-10-2018 TDE_2569 eb6cf23f752830235a5c21bd7ed7e897 356 Gene3D G3DSA:3.20.20.70 2 355 1.8E-135 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2569 eb6cf23f752830235a5c21bd7ed7e897 356 Pfam PF00793 DAHP synthetase I family 44 340 8.5E-79 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TDE_2569 eb6cf23f752830235a5c21bd7ed7e897 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 352 1.3E-124 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 TDE_0758 25d700c80f0202f459d9d7c0a75440a5 331 Gene3D G3DSA:3.40.50.1980 196 331 1.0E-40 T 12-10-2018 TDE_0758 25d700c80f0202f459d9d7c0a75440a5 331 Pfam PF01497 Periplasmic binding protein 68 302 3.0E-17 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain TDE_0758 25d700c80f0202f459d9d7c0a75440a5 331 Gene3D G3DSA:3.40.50.1980 23 193 3.8E-42 T 12-10-2018 TDE_0758 25d700c80f0202f459d9d7c0a75440a5 331 SUPERFAMILY SSF53807 59 329 5.1E-41 T 12-10-2018 TDE_0043 a536927574330a81ec22e5043387fad8 627 SUPERFAMILY SSF48452 49 360 9.48E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 Gene3D G3DSA:1.25.40.10 391 486 3.0E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 Gene3D G3DSA:1.25.40.10 271 378 4.2E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 Pfam PF07719 Tetratricopeptide repeat 96 125 1.8E-6 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 TDE_0043 a536927574330a81ec22e5043387fad8 627 Gene3D G3DSA:1.25.40.10 164 270 3.0E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 Pfam PF13181 Tetratricopeptide repeat 129 160 0.0014 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 Pfam PF13181 Tetratricopeptide repeat 415 445 0.0019 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 Gene3D G3DSA:1.25.40.10 2 163 2.8E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 SUPERFAMILY SSF48452 392 615 2.81E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 SMART SM00028 412 445 2.7E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 SMART SM00028 202 235 71.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 SMART SM00028 308 341 0.048 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 SMART SM00028 581 614 1.5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 SMART SM00028 127 160 0.13 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 SMART SM00028 93 126 1.8E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0043 a536927574330a81ec22e5043387fad8 627 Gene3D G3DSA:1.25.40.10 494 627 1.8E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0894 9ac28469f64a74bc7db4e3cd078a3540 263 Pfam PF06182 ABC-2 family transporter protein 52 262 2.4E-15 T 12-10-2018 IPR010390 Protein of unknown function DUF990 TDE_2510 cef017bfec40bbaa9f97441a81b09238 577 SUPERFAMILY SSF90123 5 317 1.7E-48 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2510 cef017bfec40bbaa9f97441a81b09238 577 Gene3D G3DSA:3.40.50.300 330 577 2.7E-89 T 12-10-2018 TDE_2510 cef017bfec40bbaa9f97441a81b09238 577 Pfam PF00664 ABC transporter transmembrane region 23 281 4.3E-26 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2510 cef017bfec40bbaa9f97441a81b09238 577 SUPERFAMILY SSF52540 334 573 4.66E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2510 cef017bfec40bbaa9f97441a81b09238 577 Gene3D G3DSA:1.20.1560.10 2 321 1.4E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2510 cef017bfec40bbaa9f97441a81b09238 577 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2510 cef017bfec40bbaa9f97441a81b09238 577 Pfam PF00005 ABC transporter 355 503 1.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2510 cef017bfec40bbaa9f97441a81b09238 577 SMART SM00382 363 549 1.0E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2772 1b4d947979c94e098484172fd8009d1e 52 Gene3D G3DSA:3.40.50.300 1 47 5.1E-15 T 12-10-2018 TDE_2772 1b4d947979c94e098484172fd8009d1e 52 SUPERFAMILY SSF52540 1 46 1.31E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0924 28062dfc7f13efecb0d31e714fe7cb90 627 Pfam PF00664 ABC transporter transmembrane region 51 308 2.9E-18 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0924 28062dfc7f13efecb0d31e714fe7cb90 627 SUPERFAMILY SSF90123 28 359 2.09E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0924 28062dfc7f13efecb0d31e714fe7cb90 627 Pfam PF00005 ABC transporter 401 549 1.8E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0924 28062dfc7f13efecb0d31e714fe7cb90 627 Gene3D G3DSA:3.40.50.300 359 621 6.5E-78 T 12-10-2018 TDE_0924 28062dfc7f13efecb0d31e714fe7cb90 627 SUPERFAMILY SSF52540 363 617 9.02E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0924 28062dfc7f13efecb0d31e714fe7cb90 627 SMART SM00382 409 597 4.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0924 28062dfc7f13efecb0d31e714fe7cb90 627 ProSitePatterns PS00211 ABC transporters family signature. 521 535 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0924 28062dfc7f13efecb0d31e714fe7cb90 627 Gene3D G3DSA:1.20.1560.10 8 358 4.2E-37 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1178 a934ded0131f967849333a54ca0067d6 262 Gene3D G3DSA:3.40.50.300 1 257 8.7E-64 T 12-10-2018 TDE_1178 a934ded0131f967849333a54ca0067d6 262 SUPERFAMILY SSF52540 4 230 6.88E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1178 a934ded0131f967849333a54ca0067d6 262 SMART SM00382 28 217 4.9E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1178 a934ded0131f967849333a54ca0067d6 262 Pfam PF00005 ABC transporter 20 167 2.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1178 a934ded0131f967849333a54ca0067d6 262 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1999 46eaed368b5b32bfce6eb49c3276cb6b 217 Pfam PF00929 Exonuclease 18 172 7.3E-36 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TDE_1999 46eaed368b5b32bfce6eb49c3276cb6b 217 SUPERFAMILY SSF53098 13 182 2.31E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_1999 46eaed368b5b32bfce6eb49c3276cb6b 217 SMART SM00479 15 181 3.3E-47 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TDE_1999 46eaed368b5b32bfce6eb49c3276cb6b 217 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 11 183 1.9E-47 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_1999 46eaed368b5b32bfce6eb49c3276cb6b 217 Gene3D G3DSA:3.30.420.10 11 178 4.1E-51 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_1636 3853d40d654aaade8cb9b98995f808ec 812 SUPERFAMILY SSF89372 416 586 2.48E-6 T 12-10-2018 TDE_2122 0bf4cc880aedacd38bc1f2ce775c3d2a 394 SUPERFAMILY SSF64182 36 354 1.31E-28 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily TDE_2122 0bf4cc880aedacd38bc1f2ce775c3d2a 394 Gene3D G3DSA:3.90.1640.10 16 228 3.2E-25 T 12-10-2018 TDE_2122 0bf4cc880aedacd38bc1f2ce775c3d2a 394 Pfam PF01368 DHH family 36 175 1.2E-6 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TDE_1099 97053a3da7d8b5fc0b412aa5fc3bcdb3 171 Pfam PF00583 Acetyltransferase (GNAT) family 61 146 2.7E-12 T 12-10-2018 IPR000182 GNAT domain TDE_1099 97053a3da7d8b5fc0b412aa5fc3bcdb3 171 Gene3D G3DSA:3.40.630.30 6 152 3.1E-27 T 12-10-2018 TDE_1099 97053a3da7d8b5fc0b412aa5fc3bcdb3 171 SUPERFAMILY SSF55729 61 155 2.44E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2756 acb9c281d9d328273a2ef1c19f36d582 539 PIRSF PIRSF002741 10 539 3.6E-77 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TDE_2756 acb9c281d9d328273a2ef1c19f36d582 539 SUPERFAMILY SSF53850 26 532 6.33E-95 T 12-10-2018 TDE_2756 acb9c281d9d328273a2ef1c19f36d582 539 Gene3D G3DSA:3.10.105.10 288 511 4.4E-120 T 12-10-2018 TDE_2756 acb9c281d9d328273a2ef1c19f36d582 539 Gene3D G3DSA:3.40.190.10 41 523 4.4E-120 T 12-10-2018 TDE_2756 acb9c281d9d328273a2ef1c19f36d582 539 Gene3D G3DSA:3.90.76.10 61 184 4.4E-120 T 12-10-2018 TDE_2756 acb9c281d9d328273a2ef1c19f36d582 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 457 9.1E-69 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain TDE_0033 27d285181857564b268bad5fc70b9cc2 239 SMART SM00448 2 118 1.6E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0033 27d285181857564b268bad5fc70b9cc2 239 SUPERFAMILY SSF52172 1 131 1.37E-23 T 12-10-2018 IPR011006 CheY-like superfamily TDE_0033 27d285181857564b268bad5fc70b9cc2 239 Pfam PF00072 Response regulator receiver domain 4 116 5.8E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0033 27d285181857564b268bad5fc70b9cc2 239 Pfam PF04397 LytTr DNA-binding domain 140 229 1.9E-17 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TDE_0033 27d285181857564b268bad5fc70b9cc2 239 Gene3D G3DSA:2.40.50.1020 130 231 1.5E-13 T 12-10-2018 TDE_0033 27d285181857564b268bad5fc70b9cc2 239 SMART SM00850 139 231 1.3E-22 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TDE_0033 27d285181857564b268bad5fc70b9cc2 239 Gene3D G3DSA:3.40.50.2300 1 129 1.5E-26 T 12-10-2018 TDE_0088 addece2fc94c6330fff1f57ff0032b6d 480 Pfam PF02386 Cation transport protein 297 474 8.6E-25 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 TDE_0088 addece2fc94c6330fff1f57ff0032b6d 480 Pfam PF02386 Cation transport protein 41 259 3.9E-35 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 TDE_0088 addece2fc94c6330fff1f57ff0032b6d 480 PIRSF PIRSF006247 1 480 1.0E-179 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 TDE_2518 c4b5ed0f9df6dbf2f65662226bb79a91 276 Hamap MF_02040 Iron-sulfur cluster carrier protein. 31 274 33.281 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein TDE_2518 c4b5ed0f9df6dbf2f65662226bb79a91 276 Gene3D G3DSA:3.40.50.300 28 269 1.3E-70 T 12-10-2018 TDE_2518 c4b5ed0f9df6dbf2f65662226bb79a91 276 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 36 258 6.0E-85 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 TDE_2518 c4b5ed0f9df6dbf2f65662226bb79a91 276 SUPERFAMILY SSF52540 31 258 1.47E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1608 1c3803acd72862df76d54d26c9a64657 239 SUPERFAMILY SSF53335 2 239 3.73E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1608 1c3803acd72862df76d54d26c9a64657 239 Gene3D G3DSA:2.20.25.110 140 198 2.7E-34 T 12-10-2018 TDE_1608 1c3803acd72862df76d54d26c9a64657 239 Gene3D G3DSA:3.40.50.150 19 235 2.7E-34 T 12-10-2018 TDE_1608 1c3803acd72862df76d54d26c9a64657 239 Pfam PF13649 Methyltransferase domain 37 132 3.6E-11 T 12-10-2018 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 PIRSF PIRSF002133 1 124 1.0E-54 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.5E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.5E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.5E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.5E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.5E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.5E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 SUPERFAMILY SSF50249 2 123 8.57E-53 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.3E-69 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 Gene3D G3DSA:2.40.50.140 1 124 1.0E-63 T 12-10-2018 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.3E-42 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1047 3d8f83fab7429170ce64aa2b47f13729 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.443 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1083 c3862a8d57541b45813b0474e4bbcf9c 261 SUPERFAMILY SSF55120 11 254 1.22E-38 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_1083 c3862a8d57541b45813b0474e4bbcf9c 261 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 67 81 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_1083 c3862a8d57541b45813b0474e4bbcf9c 261 Gene3D G3DSA:3.30.2350.10 5 246 1.6E-36 T 12-10-2018 TDE_1083 c3862a8d57541b45813b0474e4bbcf9c 261 Pfam PF00849 RNA pseudouridylate synthase 20 194 2.5E-24 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 Pfam PF00072 Response regulator receiver domain 561 670 3.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 Pfam PF00072 Response regulator receiver domain 397 469 2.0E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 Gene3D G3DSA:3.30.565.10 207 380 3.3E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_2502 a77597cfba8049b98166e73c6842f77b 676 SUPERFAMILY SSF55874 197 379 1.14E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_2502 a77597cfba8049b98166e73c6842f77b 676 SMART SM00388 143 208 1.9E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 376 2.0E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_2502 a77597cfba8049b98166e73c6842f77b 676 Gene3D G3DSA:3.40.50.2300 559 676 8.7E-37 T 12-10-2018 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 Gene3D G3DSA:1.10.287.130 118 206 8.0E-25 T 12-10-2018 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 SUPERFAMILY SSF52172 394 519 6.69E-18 T 12-10-2018 IPR011006 CheY-like superfamily TDE_2502 a77597cfba8049b98166e73c6842f77b 676 SUPERFAMILY SSF47384 129 210 2.35E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 375 8.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 8.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 356 8.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 331 8.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 SUPERFAMILY SSF52172 558 674 2.85E-35 T 12-10-2018 IPR011006 CheY-like superfamily TDE_2502 a77597cfba8049b98166e73c6842f77b 676 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 208 2.8E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 SMART SM00448 394 514 1.8E-6 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 SMART SM00448 559 670 1.1E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 Gene3D G3DSA:3.40.50.2300 381 522 4.7E-21 T 12-10-2018 TDE_2502 a77597cfba8049b98166e73c6842f77b 676 SMART SM00387 255 378 1.1E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0206 d4371f547bac6920380c610b1718f8a3 618 SUPERFAMILY SSF52058 127 431 3.51E-34 T 12-10-2018 TDE_0206 d4371f547bac6920380c610b1718f8a3 618 SUPERFAMILY SSF52058 371 557 3.23E-15 T 12-10-2018 TDE_0206 d4371f547bac6920380c610b1718f8a3 618 Gene3D G3DSA:3.80.10.10 142 292 6.0E-33 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0206 d4371f547bac6920380c610b1718f8a3 618 Gene3D G3DSA:3.80.10.10 293 477 4.6E-42 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2138 e36f3aff4732671ce0e3271a007e1b47 127 SMART SM00248 34 63 0.028 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2138 e36f3aff4732671ce0e3271a007e1b47 127 SMART SM00248 67 96 490.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2138 e36f3aff4732671ce0e3271a007e1b47 127 SMART SM00248 1 30 1900.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 TDE_2138 e36f3aff4732671ce0e3271a007e1b47 127 Gene3D G3DSA:1.25.40.20 5 126 1.3E-20 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2138 e36f3aff4732671ce0e3271a007e1b47 127 SUPERFAMILY SSF48403 6 124 1.82E-20 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TDE_2138 e36f3aff4732671ce0e3271a007e1b47 127 Pfam PF12796 Ankyrin repeats (3 copies) 8 64 2.4E-8 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain TDE_1443 15d3f792d12c2a60fecc56c2a75171a4 258 SMART SM00967 4 92 7.5E-7 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TDE_1443 15d3f792d12c2a60fecc56c2a75171a4 258 SUPERFAMILY SSF75217 102 255 1.7E-46 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases TDE_1443 15d3f792d12c2a60fecc56c2a75171a4 258 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 256 1.2E-68 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 TDE_1443 15d3f792d12c2a60fecc56c2a75171a4 258 SUPERFAMILY SSF55315 3 87 1.41E-6 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like TDE_1443 15d3f792d12c2a60fecc56c2a75171a4 258 Gene3D G3DSA:3.40.1280.10 88 258 4.8E-54 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TDE_1443 15d3f792d12c2a60fecc56c2a75171a4 258 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 75 2.8E-7 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TDE_1443 15d3f792d12c2a60fecc56c2a75171a4 258 Pfam PF00588 SpoU rRNA Methylase family 111 250 5.8E-41 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TDE_1443 15d3f792d12c2a60fecc56c2a75171a4 258 Gene3D G3DSA:3.30.1330.30 1 87 1.9E-5 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 SUPERFAMILY SSF82866 181 371 4.97E-30 T 12-10-2018 TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 Gene3D G3DSA:1.20.1640.10 702 888 4.1E-16 T 12-10-2018 TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 Gene3D G3DSA:1.20.1640.10 210 387 6.8E-15 T 12-10-2018 TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 PRINTS PR00702 Acriflavin resistance protein family signature 774 798 7.4E-10 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 PRINTS PR00702 Acriflavin resistance protein family signature 746 767 7.4E-10 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 PRINTS PR00702 Acriflavin resistance protein family signature 849 872 7.4E-10 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 PRINTS PR00702 Acriflavin resistance protein family signature 719 742 7.4E-10 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 Pfam PF03176 MMPL family 39 383 7.4E-17 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 Pfam PF03176 MMPL family 683 883 7.8E-19 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TDE_2704 30d86cde25e5d33e3fd1d5f6e2511204 898 SUPERFAMILY SSF82866 685 876 1.44E-32 T 12-10-2018 TDE_2445 834df47b118ea51934cf05577b79f6f0 101 SUPERFAMILY SSF47413 3 69 7.6E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_2445 834df47b118ea51934cf05577b79f6f0 101 Pfam PF01381 Helix-turn-helix 11 65 2.6E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_2445 834df47b118ea51934cf05577b79f6f0 101 Gene3D G3DSA:1.10.260.40 1 74 1.1E-19 T 12-10-2018 TDE_2445 834df47b118ea51934cf05577b79f6f0 101 SMART SM00530 10 65 6.8E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 Gene3D G3DSA:1.20.58.410 4 100 3.5E-7 T 12-10-2018 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 Gene3D G3DSA:3.30.160.20 209 295 1.6E-99 T 12-10-2018 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 Pfam PF03462 PCRF domain 9 202 1.7E-70 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 353 2.8E-158 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 SUPERFAMILY SSF75620 8 351 2.75E-135 T 12-10-2018 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 Pfam PF00472 RF-1 domain 210 319 2.3E-41 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 Gene3D G3DSA:3.30.70.1660 110 340 1.6E-99 T 12-10-2018 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 39.658 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TDE_2489 2c8fc28c21458394bcac0d2cefc52552 361 SMART SM00937 62 177 4.1E-59 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 TDE_1506 b082530f591ca73b381420178be5ce84 296 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 7 294 3.6E-108 T 12-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 TDE_1506 b082530f591ca73b381420178be5ce84 296 Pfam PF03313 Serine dehydratase alpha chain 19 279 2.1E-73 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit TDE_1613 99a735aa2237c9288c54e737d9dcb0ab 204 SUPERFAMILY SSF48452 30 157 2.99E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1613 99a735aa2237c9288c54e737d9dcb0ab 204 Gene3D G3DSA:1.25.40.10 105 182 9.3E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1613 99a735aa2237c9288c54e737d9dcb0ab 204 Gene3D G3DSA:1.25.40.10 15 104 1.4E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 3.7E-72 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 SUPERFAMILY SSF46934 1 55 1.7E-17 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 Pfam PF00889 Elongation factor TS 70 277 8.2E-51 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 SUPERFAMILY SSF54713 55 134 5.4E-15 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 Gene3D G3DSA:1.10.286.20 192 236 1.3E-37 T 12-10-2018 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 Gene3D G3DSA:3.30.479.20 56 136 1.2E-17 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 Gene3D G3DSA:3.30.479.20 143 277 1.3E-37 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 Gene3D G3DSA:1.10.8.10 1 55 4.3E-22 T 12-10-2018 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 49.669 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TDE_2346 810d8aa675eaee6b682e9478aad12d5c 280 SUPERFAMILY SSF54713 141 277 8.76E-30 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 350 2.9E-17 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 Pfam PF00817 impB/mucB/samB family 10 155 1.6E-49 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 SUPERFAMILY SSF56672 4 231 3.56E-79 T 12-10-2018 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 Gene3D G3DSA:1.10.150.20 174 236 1.3E-11 T 12-10-2018 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 Gene3D G3DSA:3.30.1490.100 241 354 1.8E-22 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 Gene3D G3DSA:2.30.40.20 15 72 6.3E-30 T 12-10-2018 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 Gene3D G3DSA:3.30.70.270 73 173 4.3E-30 T 12-10-2018 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 SUPERFAMILY SSF100879 245 345 8.24E-22 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 Pfam PF11798 IMS family HHH motif 170 198 3.2E-7 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 TDE_0963 c544ed447e84a3ce6ad7ae852ea2e3c7 395 Hamap MF_01113 DNA polymerase IV [dinB]. 4 353 32.389 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 TDE_1915 e2f94279d00307421ce9e480d101fbc9 391 SUPERFAMILY SSF56796 2 390 2.22E-111 T 12-10-2018 TDE_1915 e2f94279d00307421ce9e480d101fbc9 391 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 365 3.7E-98 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 TDE_1915 e2f94279d00307421ce9e480d101fbc9 391 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 TDE_1915 e2f94279d00307421ce9e480d101fbc9 391 Gene3D G3DSA:1.20.1090.10 185 391 9.2E-50 T 12-10-2018 TDE_1915 e2f94279d00307421ce9e480d101fbc9 391 Gene3D G3DSA:3.40.50.1970 1 184 2.3E-52 T 12-10-2018 TDE_1915 e2f94279d00307421ce9e480d101fbc9 391 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 TDE_1631 4fb19332f563d492c8d8cc1aa70dc1d7 498 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 39 498 4.4E-159 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 TDE_1631 4fb19332f563d492c8d8cc1aa70dc1d7 498 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 20 498 1.2E-173 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 TDE_1631 4fb19332f563d492c8d8cc1aa70dc1d7 498 SUPERFAMILY SSF100950 232 496 1.26E-54 T 12-10-2018 IPR037171 NagB/RpiA transferase-like TDE_1631 4fb19332f563d492c8d8cc1aa70dc1d7 498 Gene3D G3DSA:3.40.1080.10 230 498 5.7E-116 T 12-10-2018 TDE_1631 4fb19332f563d492c8d8cc1aa70dc1d7 498 Gene3D G3DSA:3.40.1080.10 3 228 8.9E-79 T 12-10-2018 TDE_1631 4fb19332f563d492c8d8cc1aa70dc1d7 498 PIRSF PIRSF009451 8 498 1.2E-188 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 TDE_1631 4fb19332f563d492c8d8cc1aa70dc1d7 498 SUPERFAMILY SSF100950 12 229 1.12E-61 T 12-10-2018 IPR037171 NagB/RpiA transferase-like TDE_1535 e8d274318348996fc645a9cd1bb9e484 267 SUPERFAMILY SSF56300 1 256 1.39E-50 T 12-10-2018 TDE_1535 e8d274318348996fc645a9cd1bb9e484 267 Gene3D G3DSA:3.60.21.10 1 263 1.2E-83 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like TDE_1535 e8d274318348996fc645a9cd1bb9e484 267 PIRSF PIRSF004789 1 264 1.8E-91 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TDE_1535 e8d274318348996fc645a9cd1bb9e484 267 Pfam PF13277 YmdB-like protein 4 256 1.7E-78 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 Pfam PF09382 RQC domain 419 527 1.2E-30 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 19 620 5.3E-210 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 SUPERFAMILY SSF52540 70 357 3.56E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 SMART SM00490 254 335 3.2E-29 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 SMART SM00487 26 222 8.5E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 Pfam PF00570 HRDC domain 553 619 7.9E-17 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 Pfam PF00270 DEAD/DEAH box helicase 32 192 6.9E-21 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 Gene3D G3DSA:1.10.10.10 417 535 1.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 Gene3D G3DSA:3.40.50.300 214 416 9.3E-61 T 12-10-2018 TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 SUPERFAMILY SSF47819 545 623 2.62E-18 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 Pfam PF16124 RecQ zinc-binding 347 414 6.8E-11 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 Gene3D G3DSA:1.10.150.80 547 626 3.6E-17 T 12-10-2018 TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 Pfam PF00271 Helicase conserved C-terminal domain 232 334 1.6E-19 T 12-10-2018 IPR001650 Helicase, C-terminal TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 SMART SM00956 423 525 3.0E-38 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 SUPERFAMILY SSF46785 418 542 5.17E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 Gene3D G3DSA:3.40.50.300 3 213 6.6E-77 T 12-10-2018 TDE_0326 2e28bc915a5a34d3f8bb8c91f9f54f57 626 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 474 1.2E-160 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 TDE_1080 00909c918d8c16d103951e111a2ad200 293 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 27 291 48.772 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TDE_1080 00909c918d8c16d103951e111a2ad200 293 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 59 86 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 TDE_1080 00909c918d8c16d103951e111a2ad200 293 SMART SM00650 43 217 4.8E-59 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 TDE_1080 00909c918d8c16d103951e111a2ad200 293 Pfam PF00398 Ribosomal RNA adenine dimethylase 28 289 1.0E-47 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TDE_1080 00909c918d8c16d103951e111a2ad200 293 Gene3D G3DSA:3.40.50.150 9 219 1.8E-57 T 12-10-2018 TDE_1080 00909c918d8c16d103951e111a2ad200 293 SUPERFAMILY SSF53335 28 290 6.5E-64 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1080 00909c918d8c16d103951e111a2ad200 293 Gene3D G3DSA:1.10.8.100 221 290 7.9E-13 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 TDE_1080 00909c918d8c16d103951e111a2ad200 293 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 27 288 2.5E-74 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TDE_0217 1e39ad1a2e295122166a8f097bb6f75d 172 Gene3D G3DSA:3.30.160.70 1 73 4.4E-13 T 12-10-2018 TDE_0217 1e39ad1a2e295122166a8f097bb6f75d 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 128 134 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TDE_0217 1e39ad1a2e295122166a8f097bb6f75d 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 158 8.0E-32 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TDE_0217 1e39ad1a2e295122166a8f097bb6f75d 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 158 40.236 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 TDE_0217 1e39ad1a2e295122166a8f097bb6f75d 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 71 7.5E-7 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TDE_0217 1e39ad1a2e295122166a8f097bb6f75d 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 3.0E-35 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TDE_0217 1e39ad1a2e295122166a8f097bb6f75d 172 SUPERFAMILY SSF53155 1 82 5.49E-17 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TDE_0217 1e39ad1a2e295122166a8f097bb6f75d 172 Gene3D G3DSA:1.10.10.10 77 162 2.1E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0217 1e39ad1a2e295122166a8f097bb6f75d 172 SUPERFAMILY SSF46767 77 158 8.24E-31 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 TDE_0942 c883805199bfdf4ccdbaa249bc43851e 575 Gene3D G3DSA:3.30.300.30 462 575 2.8E-6 T 12-10-2018 TDE_0942 c883805199bfdf4ccdbaa249bc43851e 575 Pfam PF00501 AMP-binding enzyme 31 466 2.0E-92 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TDE_0942 c883805199bfdf4ccdbaa249bc43851e 575 Gene3D G3DSA:3.40.50.12780 17 297 2.6E-52 T 12-10-2018 TDE_0942 c883805199bfdf4ccdbaa249bc43851e 575 Gene3D G3DSA:3.40.50.12780 303 457 5.4E-41 T 12-10-2018 TDE_0942 c883805199bfdf4ccdbaa249bc43851e 575 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 12-10-2018 IPR020845 AMP-binding, conserved site TDE_0942 c883805199bfdf4ccdbaa249bc43851e 575 SUPERFAMILY SSF56801 11 573 1.3E-109 T 12-10-2018 TDE_2353 8ec2738136b0c663ad8f68e1620e5ea2 415 Pfam PF00700 Bacterial flagellin C-terminal helical region 333 414 9.2E-9 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TDE_2353 8ec2738136b0c663ad8f68e1620e5ea2 415 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 7.1E-12 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TDE_2353 8ec2738136b0c663ad8f68e1620e5ea2 415 Gene3D G3DSA:1.20.1330.10 42 265 6.3E-30 T 12-10-2018 TDE_2353 8ec2738136b0c663ad8f68e1620e5ea2 415 Pfam PF07196 Flagellin hook IN motif 219 265 5.6E-6 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TDE_2353 8ec2738136b0c663ad8f68e1620e5ea2 415 SUPERFAMILY SSF64518 2 415 5.1E-55 T 12-10-2018 TDE_2353 8ec2738136b0c663ad8f68e1620e5ea2 415 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 414 3.5E-107 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 TDE_0097 6323e5c5738684a17e4713e2083e7b10 174 SUPERFAMILY SSF160379 1 173 2.22E-43 T 12-10-2018 TDE_0097 6323e5c5738684a17e4713e2083e7b10 174 PIRSF PIRSF008502 1 174 5.0E-45 T 12-10-2018 IPR012545 Protein of unknown function DUF1697 TDE_0097 6323e5c5738684a17e4713e2083e7b10 174 Pfam PF08002 Protein of unknown function (DUF1697) 2 136 6.3E-36 T 12-10-2018 IPR012545 Protein of unknown function DUF1697 TDE_0097 6323e5c5738684a17e4713e2083e7b10 174 Gene3D G3DSA:3.30.70.1260 88 174 1.1E-8 T 12-10-2018 TDE_0097 6323e5c5738684a17e4713e2083e7b10 174 Gene3D G3DSA:3.30.70.1280 1 86 8.6E-28 T 12-10-2018 TDE_2781 88f76ab058897afe7f4ebcc0e9af5855 609 Pfam PF00005 ABC transporter 378 526 1.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2781 88f76ab058897afe7f4ebcc0e9af5855 609 SUPERFAMILY SSF52540 354 597 8.16E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2781 88f76ab058897afe7f4ebcc0e9af5855 609 Gene3D G3DSA:3.40.50.300 357 608 2.5E-89 T 12-10-2018 TDE_2781 88f76ab058897afe7f4ebcc0e9af5855 609 Gene3D G3DSA:1.20.1560.10 3 335 3.6E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2781 88f76ab058897afe7f4ebcc0e9af5855 609 SUPERFAMILY SSF90123 14 332 5.76E-70 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2781 88f76ab058897afe7f4ebcc0e9af5855 609 SMART SM00382 386 572 6.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2781 88f76ab058897afe7f4ebcc0e9af5855 609 Pfam PF00664 ABC transporter transmembrane region 36 303 2.8E-45 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 SUPERFAMILY SSF55307 214 330 1.08E-37 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 SUPERFAMILY SSF52490 23 217 2.49E-68 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 Gene3D G3DSA:3.40.50.1440 15 229 1.2E-77 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 18 360 35.48 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 ProSitePatterns PS01134 FtsZ protein signature 1. 53 87 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 23 182 1.8E-39 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 Pfam PF12327 FtsZ family, C-terminal domain 231 325 3.8E-26 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 ProSitePatterns PS01135 FtsZ protein signature 2. 106 127 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 SMART SM00865 216 334 1.9E-43 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 PRINTS PR00423 Cell division protein FtsZ signature 221 242 9.6E-46 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 PRINTS PR00423 Cell division protein FtsZ signature 198 220 9.6E-46 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 PRINTS PR00423 Cell division protein FtsZ signature 135 156 9.6E-46 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 PRINTS PR00423 Cell division protein FtsZ signature 107 127 9.6E-46 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 Gene3D G3DSA:3.30.1330.20 230 340 3.7E-35 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 340 3.5E-124 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TDE_1204 460b8199c01a91d321df5d6fccd4136f 427 SMART SM00864 22 214 7.6E-111 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TDE_2295 dab8d3f8ed2f7f239cc7d1c0c9b2dee4 289 Gene3D G3DSA:3.30.70.100 173 265 3.8E-23 T 12-10-2018 TDE_2295 dab8d3f8ed2f7f239cc7d1c0c9b2dee4 289 SUPERFAMILY SSF82689 173 270 1.83E-27 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TDE_2295 dab8d3f8ed2f7f239cc7d1c0c9b2dee4 289 SUPERFAMILY SSF82861 22 104 2.62E-13 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TDE_2295 dab8d3f8ed2f7f239cc7d1c0c9b2dee4 289 Pfam PF00924 Mechanosensitive ion channel 63 260 2.8E-54 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TDE_2295 dab8d3f8ed2f7f239cc7d1c0c9b2dee4 289 SUPERFAMILY SSF50182 106 171 4.25E-16 T 12-10-2018 IPR010920 LSM domain superfamily TDE_2295 dab8d3f8ed2f7f239cc7d1c0c9b2dee4 289 Gene3D G3DSA:2.30.30.60 122 170 6.9E-13 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TDE_1455 7ebca84be5296568ca63126a5965ee81 88 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 66 4.2E-10 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TDE_1455 7ebca84be5296568ca63126a5965ee81 88 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 49 4.7E-8 T 12-10-2018 TDE_1455 7ebca84be5296568ca63126a5965ee81 88 SUPERFAMILY SSF143120 4 64 1.57E-14 T 12-10-2018 IPR036165 YefM-like superfamily TDE_1455 7ebca84be5296568ca63126a5965ee81 88 Gene3D G3DSA:3.40.1620.40 1 50 2.6E-6 T 12-10-2018 TDE_0072 e982d6bcc62bc68d7f3e5dc32105c377 712 SMART SM00283 422 669 2.3E-52 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0072 e982d6bcc62bc68d7f3e5dc32105c377 712 SUPERFAMILY SSF103190 81 200 2.2E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_0072 e982d6bcc62bc68d7f3e5dc32105c377 712 SMART SM00304 327 379 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0072 e982d6bcc62bc68d7f3e5dc32105c377 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 491 637 4.6E-25 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0072 e982d6bcc62bc68d7f3e5dc32105c377 712 Pfam PF14827 Double sensory domain of two-component sensor kinase 68 210 2.8E-24 T 12-10-2018 IPR029150 Double Cache domain 3 TDE_0072 e982d6bcc62bc68d7f3e5dc32105c377 712 SUPERFAMILY SSF58104 347 661 4.45E-44 T 12-10-2018 TDE_0072 e982d6bcc62bc68d7f3e5dc32105c377 712 Gene3D G3DSA:1.10.287.950 393 711 6.4E-48 T 12-10-2018 TDE_0072 e982d6bcc62bc68d7f3e5dc32105c377 712 Gene3D G3DSA:1.20.1480.50 292 383 4.4E-8 T 12-10-2018 TDE_0343 10ab94132637acda8525348d14d5bd08 372 SUPERFAMILY SSF53474 43 369 5.67E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0343 10ab94132637acda8525348d14d5bd08 372 Pfam PF00561 alpha/beta hydrolase fold 68 169 2.8E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TDE_0343 10ab94132637acda8525348d14d5bd08 372 Gene3D G3DSA:3.40.50.1820 40 370 2.1E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 Gene3D G3DSA:3.40.50.800 348 450 2.1E-32 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 SUPERFAMILY SSF52954 340 446 9.82E-34 T 12-10-2018 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 Pfam PF03129 Anticodon binding domain 354 442 1.2E-21 T 12-10-2018 IPR004154 Anticodon-binding TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 PRINTS PR01043 Glycyl-tRNA synthetase signature 390 409 4.0E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 PRINTS PR01043 Glycyl-tRNA synthetase signature 147 164 4.0E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 PRINTS PR01043 Glycyl-tRNA synthetase signature 27 41 4.0E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 PRINTS PR01043 Glycyl-tRNA synthetase signature 196 206 4.0E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 PRINTS PR01043 Glycyl-tRNA synthetase signature 304 316 4.0E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 PRINTS PR01043 Glycyl-tRNA synthetase signature 179 196 4.0E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 PRINTS PR01043 Glycyl-tRNA synthetase signature 126 138 4.0E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 Gene3D G3DSA:3.30.930.10 8 347 6.2E-132 T 12-10-2018 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 7 228 1.3E-87 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 140 319 7.4E-12 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 5 445 51.806 T 12-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 TDE_0020 fbab0d655626c7e745fe595fecbe8ab9 451 SUPERFAMILY SSF55681 7 356 2.16E-119 T 12-10-2018 TDE_1071 07c17f86c8d178d0061ce862b9da7908 591 Gene3D G3DSA:3.10.105.10 287 559 3.9E-24 T 12-10-2018 TDE_1071 07c17f86c8d178d0061ce862b9da7908 591 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 479 2.1E-53 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain TDE_1071 07c17f86c8d178d0061ce862b9da7908 591 PIRSF PIRSF002741 1 580 3.6E-55 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TDE_1071 07c17f86c8d178d0061ce862b9da7908 591 SUPERFAMILY SSF53850 66 580 1.45E-65 T 12-10-2018 TDE_1071 07c17f86c8d178d0061ce862b9da7908 591 Gene3D G3DSA:3.40.190.10 24 286 6.4E-42 T 12-10-2018 TDE_0549 044a4289aa3236174c36d12c1da25c23 106 Pfam PF04993 TfoX N-terminal domain 14 73 1.8E-9 T 12-10-2018 IPR007076 TfoX, N-terminal TDE_0549 044a4289aa3236174c36d12c1da25c23 106 Gene3D G3DSA:3.30.1460.30 4 74 2.2E-5 T 12-10-2018 TDE_0549 044a4289aa3236174c36d12c1da25c23 106 SUPERFAMILY SSF159894 5 96 9.42E-17 T 12-10-2018 TDE_0211 b0bd029c7c585e1407b553a09ec6926e 243 Gene3D G3DSA:1.10.3720.10 58 242 7.4E-17 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0211 b0bd029c7c585e1407b553a09ec6926e 243 SUPERFAMILY SSF161098 57 236 4.97E-19 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0211 b0bd029c7c585e1407b553a09ec6926e 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 234 1.3E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0029 9d21c617c03075f61d2a10923cae92ee 592 Pfam PF00005 ABC transporter 362 515 5.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0029 9d21c617c03075f61d2a10923cae92ee 592 Gene3D G3DSA:3.40.50.300 331 588 6.5E-70 T 12-10-2018 TDE_0029 9d21c617c03075f61d2a10923cae92ee 592 SUPERFAMILY SSF52540 338 585 2.15E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0029 9d21c617c03075f61d2a10923cae92ee 592 SMART SM00382 371 561 6.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0029 9d21c617c03075f61d2a10923cae92ee 592 Gene3D G3DSA:1.20.1560.10 2 330 1.1E-9 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0029 9d21c617c03075f61d2a10923cae92ee 592 SUPERFAMILY SSF90123 16 504 5.36E-19 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 Pfam PF00005 ABC transporter 31 195 2.7E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 Pfam PF00005 ABC transporter 351 498 2.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 SUPERFAMILY SSF52540 6 266 2.54E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 305 7.4E-14 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 SMART SM00382 359 558 1.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 SMART SM00382 39 244 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 SUPERFAMILY SSF52540 330 562 6.02E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 Gene3D G3DSA:3.40.50.300 4 324 5.4E-78 T 12-10-2018 TDE_2632 84d11d9be7a3c816b3fa0b0448b01268 564 Gene3D G3DSA:3.40.50.300 327 564 2.3E-63 T 12-10-2018 TDE_0401 7c44cfedba7e15203c2b901c868f0456 797 SUPERFAMILY SSF55073 541 720 3.77E-52 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0401 7c44cfedba7e15203c2b901c868f0456 797 Gene3D G3DSA:3.30.70.1230 537 726 8.1E-59 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0401 7c44cfedba7e15203c2b901c868f0456 797 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 539 715 4.6E-32 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0401 7c44cfedba7e15203c2b901c868f0456 797 SMART SM00044 507 701 4.3E-15 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_1130 bf5e876b6c9899108f62598fec76b9fd 235 SUPERFAMILY SSF53335 13 234 3.98E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1130 bf5e876b6c9899108f62598fec76b9fd 235 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 235 28.898 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TDE_1130 bf5e876b6c9899108f62598fec76b9fd 235 Pfam PF02390 Putative methyltransferase 62 228 4.6E-54 T 12-10-2018 TDE_1130 bf5e876b6c9899108f62598fec76b9fd 235 Gene3D G3DSA:3.40.50.150 29 235 4.1E-62 T 12-10-2018 TDE_1130 bf5e876b6c9899108f62598fec76b9fd 235 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 48 234 4.5E-52 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TDE_0049 93f3bf1dc11ffcece163ecb458b25bbe 296 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 296 1.1E-48 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_0049 93f3bf1dc11ffcece163ecb458b25bbe 296 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 237 1.1E-72 T 12-10-2018 TDE_2373 e873beb692c0484b126024602d99526b 199 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 5 194 4.4E-58 T 12-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 TDE_2373 e873beb692c0484b126024602d99526b 199 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 181 1.9E-20 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TDE_2373 e873beb692c0484b126024602d99526b 199 SUPERFAMILY SSF53790 3 183 3.14E-28 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TDE_2373 e873beb692c0484b126024602d99526b 199 Gene3D G3DSA:3.40.1010.10 2 98 3.2E-15 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TDE_1907 452475b9b912f07f9a2da410fd03e440 123 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 122 1.0E-59 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TDE_1907 452475b9b912f07f9a2da410fd03e440 123 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 123 24.374 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TDE_1907 452475b9b912f07f9a2da410fd03e440 123 SUPERFAMILY SSF56214 1 122 3.14E-29 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TDE_1907 452475b9b912f07f9a2da410fd03e440 123 Gene3D G3DSA:3.90.470.20 1 122 1.7E-33 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TDE_1907 452475b9b912f07f9a2da410fd03e440 123 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 122 1.6E-28 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TDE_1907 452475b9b912f07f9a2da410fd03e440 123 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 122 2.0E-26 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TDE_1907 452475b9b912f07f9a2da410fd03e440 123 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 112 3.6E-19 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TDE_0693 0e8d19edbe181caecee01e360ce62b1b 269 SUPERFAMILY SSF53613 4 266 2.34E-64 T 12-10-2018 IPR029056 Ribokinase-like TDE_0693 0e8d19edbe181caecee01e360ce62b1b 269 Pfam PF08543 Phosphomethylpyrimidine kinase 11 259 1.6E-78 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 TDE_0693 0e8d19edbe181caecee01e360ce62b1b 269 Gene3D G3DSA:3.40.1190.20 2 266 2.0E-74 T 12-10-2018 IPR029056 Ribokinase-like TDE_0693 0e8d19edbe181caecee01e360ce62b1b 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 259 8.2E-68 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TDE_1222 ecced63d65864b12c9ff958ef1c259d1 222 Gene3D G3DSA:1.10.10.10 6 142 9.6E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1222 ecced63d65864b12c9ff958ef1c259d1 222 SUPERFAMILY SSF47979 67 142 9.55E-25 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 TDE_1222 ecced63d65864b12c9ff958ef1c259d1 222 SUPERFAMILY SSF46785 15 91 1.03E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_1222 ecced63d65864b12c9ff958ef1c259d1 222 SMART SM00529 28 127 3.8E-39 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 TDE_1222 ecced63d65864b12c9ff958ef1c259d1 222 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 7 61 4.3E-11 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 TDE_1222 ecced63d65864b12c9ff958ef1c259d1 222 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 67 135 4.0E-27 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 TDE_0261 a800117c83ffa5f2a4ffda54e86c4e48 152 SUPERFAMILY SSF52218 1 147 3.46E-14 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0261 a800117c83ffa5f2a4ffda54e86c4e48 152 Pfam PF12724 Flavodoxin domain 6 103 5.7E-9 T 12-10-2018 IPR026816 Flavodoxin domain TDE_0261 a800117c83ffa5f2a4ffda54e86c4e48 152 Gene3D G3DSA:3.40.50.360 1 150 2.4E-10 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_1963 c602ae7aafea32df8a225102254ae34c 590 SUPERFAMILY SSF52540 4 167 4.14E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1963 c602ae7aafea32df8a225102254ae34c 590 Pfam PF09107 Elongation factor SelB, winged helix 549 588 3.9E-10 T 12-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 TDE_1963 c602ae7aafea32df8a225102254ae34c 590 SUPERFAMILY SSF46785 540 589 3.43E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_1963 c602ae7aafea32df8a225102254ae34c 590 Pfam PF00009 Elongation factor Tu GTP binding domain 5 167 1.7E-27 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1963 c602ae7aafea32df8a225102254ae34c 590 Gene3D G3DSA:1.10.10.10 533 590 1.8E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1963 c602ae7aafea32df8a225102254ae34c 590 SUPERFAMILY SSF50447 178 261 1.53E-14 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TDE_1963 c602ae7aafea32df8a225102254ae34c 590 PRINTS PR00315 GTP-binding elongation factor signature 56 66 4.4E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1963 c602ae7aafea32df8a225102254ae34c 590 PRINTS PR00315 GTP-binding elongation factor signature 72 83 4.4E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1963 c602ae7aafea32df8a225102254ae34c 590 PRINTS PR00315 GTP-binding elongation factor signature 109 118 4.4E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1963 c602ae7aafea32df8a225102254ae34c 590 PRINTS PR00315 GTP-binding elongation factor signature 4 17 4.4E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TDE_1963 c602ae7aafea32df8a225102254ae34c 590 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 588 1.3E-94 T 12-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 TDE_1963 c602ae7aafea32df8a225102254ae34c 590 Gene3D G3DSA:2.40.30.10 178 265 1.2E-20 T 12-10-2018 TDE_1963 c602ae7aafea32df8a225102254ae34c 590 Gene3D G3DSA:3.40.50.300 3 172 1.5E-39 T 12-10-2018 TDE_0991 e524a39c39297844ab46e9cbf17a419d 63 SUPERFAMILY SSF143800 1 61 9.22E-22 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0991 e524a39c39297844ab46e9cbf17a419d 63 Gene3D G3DSA:2.30.170.40 2 63 1.9E-17 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0991 e524a39c39297844ab46e9cbf17a419d 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 63 16.142 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0991 e524a39c39297844ab46e9cbf17a419d 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 1.8E-21 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0991 e524a39c39297844ab46e9cbf17a419d 63 Pfam PF00830 Ribosomal L28 family 3 56 5.2E-21 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0460 47714e8097d9ee0dcdd89498a9d22d76 222 Pfam PF03471 Transporter associated domain 143 216 1.1E-9 T 12-10-2018 IPR005170 Transporter-associated domain TDE_0460 47714e8097d9ee0dcdd89498a9d22d76 222 SUPERFAMILY SSF56176 143 220 5.18E-12 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TDE_0460 47714e8097d9ee0dcdd89498a9d22d76 222 Gene3D G3DSA:3.30.465.10 132 218 5.0E-10 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TDE_0460 47714e8097d9ee0dcdd89498a9d22d76 222 SMART SM01091 137 218 7.1E-11 T 12-10-2018 IPR005170 Transporter-associated domain TDE_2716 477e2bd0c7b2bd9d10c623b66df50192 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 187 2.1E-33 T 12-10-2018 TDE_2716 477e2bd0c7b2bd9d10c623b66df50192 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 181 7.0E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TDE_2716 477e2bd0c7b2bd9d10c623b66df50192 218 Gene3D G3DSA:1.10.150.240 17 86 8.4E-52 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TDE_2716 477e2bd0c7b2bd9d10c623b66df50192 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 6.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TDE_2716 477e2bd0c7b2bd9d10c623b66df50192 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 6.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TDE_2716 477e2bd0c7b2bd9d10c623b66df50192 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 6.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TDE_2716 477e2bd0c7b2bd9d10c623b66df50192 218 SUPERFAMILY SSF56784 1 215 4.07E-54 T 12-10-2018 IPR036412 HAD-like superfamily TDE_2716 477e2bd0c7b2bd9d10c623b66df50192 218 Gene3D G3DSA:3.40.50.1000 5 208 8.4E-52 T 12-10-2018 IPR023214 HAD superfamily TDE_0837 575de3ad026f45d5957dc6b3b6e87e6c 338 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 14 325 1.3E-85 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 TDE_0837 575de3ad026f45d5957dc6b3b6e87e6c 338 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 9 327 23.637 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 TDE_0837 575de3ad026f45d5957dc6b3b6e87e6c 338 Pfam PF03116 NQR2, RnfD, RnfE family 11 320 9.0E-107 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 TDE_0865 fcefb4a042d85b8d478bac833a1a8ab4 130 SMART SM00712 6 73 8.9E-29 T 12-10-2018 IPR006628 Purine-rich element binding protein family TDE_0865 fcefb4a042d85b8d478bac833a1a8ab4 130 Pfam PF11680 Protein of unknown function (DUF3276) 6 113 2.9E-15 T 12-10-2018 IPR021694 Protein of unknown function DUF3276 TDE_0865 fcefb4a042d85b8d478bac833a1a8ab4 130 Gene3D G3DSA:3.10.450.700 1 78 1.2E-23 T 12-10-2018 TDE_1738 d7800a3a68942a9fdfd0f79c9821bdd4 303 Pfam PF01551 Peptidase family M23 201 295 1.7E-30 T 12-10-2018 IPR016047 Peptidase M23 TDE_1738 d7800a3a68942a9fdfd0f79c9821bdd4 303 SUPERFAMILY SSF51261 66 298 1.57E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_1738 d7800a3a68942a9fdfd0f79c9821bdd4 303 Gene3D G3DSA:2.70.70.10 170 303 9.6E-44 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_2299 9618d541ef44cd368e8be6131104d39a 525 Pfam PF00795 Carbon-nitrogen hydrolase 232 485 1.1E-21 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TDE_2299 9618d541ef44cd368e8be6131104d39a 525 SUPERFAMILY SSF56317 222 486 5.23E-42 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_2299 9618d541ef44cd368e8be6131104d39a 525 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 56 468 3.0E-99 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TDE_2299 9618d541ef44cd368e8be6131104d39a 525 Gene3D G3DSA:3.60.110.10 221 496 1.5E-22 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_2299 9618d541ef44cd368e8be6131104d39a 525 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 7 506 18.293 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 SUPERFAMILY SSF54862 273 331 1.26E-7 T 12-10-2018 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 Gene3D G3DSA:3.30.70.20 276 332 1.1E-5 T 12-10-2018 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 SUPERFAMILY SSF51971 466 709 3.18E-58 T 12-10-2018 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 SUPERFAMILY SSF46548 339 477 1.57E-15 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 Gene3D G3DSA:3.50.50.60 466 593 4.6E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 Gene3D G3DSA:3.50.50.60 594 794 3.9E-24 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 Pfam PF00037 4Fe-4S binding domain 305 326 9.8E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 Pfam PF00037 4Fe-4S binding domain 848 871 1.3E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 373 451 2.2E-17 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 311 322 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 Gene3D G3DSA:1.10.1060.10 359 465 9.4E-25 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 PRINTS PR00419 Adrenodoxin reductase family signature 634 647 5.7E-21 T 12-10-2018 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 PRINTS PR00419 Adrenodoxin reductase family signature 468 490 5.7E-21 T 12-10-2018 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 PRINTS PR00419 Adrenodoxin reductase family signature 533 543 5.7E-21 T 12-10-2018 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 PRINTS PR00419 Adrenodoxin reductase family signature 600 614 5.7E-21 T 12-10-2018 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 PRINTS PR00419 Adrenodoxin reductase family signature 491 504 5.7E-21 T 12-10-2018 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 467 764 5.1E-27 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_2167 b6b1a240a6dcb7f8748b0cab81c3df7d 914 SUPERFAMILY SSF46548 793 873 3.3E-12 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_2645 a24aeb60b453dc5c06d22e2f70776d91 130 SUPERFAMILY SSF160148 51 123 5.49E-25 T 12-10-2018 IPR036593 CPE0013-like superfamily TDE_2645 a24aeb60b453dc5c06d22e2f70776d91 130 Pfam PF07892 Protein of unknown function (DUF1667) 40 120 1.3E-31 T 12-10-2018 IPR012460 Protein of unknown function DUF1667 TDE_2645 a24aeb60b453dc5c06d22e2f70776d91 130 Gene3D G3DSA:3.10.530.10 52 120 2.0E-22 T 12-10-2018 IPR036593 CPE0013-like superfamily TDE_0184 12d2bc91c3b2212da33405f4b68b1888 586 SUPERFAMILY SSF52540 332 571 3.43E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0184 12d2bc91c3b2212da33405f4b68b1888 586 Pfam PF00005 ABC transporter 355 502 2.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0184 12d2bc91c3b2212da33405f4b68b1888 586 Gene3D G3DSA:3.40.50.300 334 580 1.0E-59 T 12-10-2018 TDE_0184 12d2bc91c3b2212da33405f4b68b1888 586 SMART SM00382 364 554 3.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0184 12d2bc91c3b2212da33405f4b68b1888 586 Gene3D G3DSA:1.20.1560.10 3 312 1.1E-7 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0184 12d2bc91c3b2212da33405f4b68b1888 586 SUPERFAMILY SSF90123 13 309 7.85E-17 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1922 6ebdf0900d42d5a65e0601ad8a37294a 190 Pfam PF12784 PD-(D/E)XK nuclease family transposase 2 161 2.4E-11 T 12-10-2018 TDE_1922 6ebdf0900d42d5a65e0601ad8a37294a 190 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 2 190 1.9E-31 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_2333 675bdee81bb54adc7a44dc8c04a4679f 226 Pfam PF02698 DUF218 domain 51 190 3.7E-17 T 12-10-2018 IPR003848 Domain of unknown function DUF218 TDE_1977 750a1ea89276fcff505427cc5c825818 396 Gene3D G3DSA:3.40.50.1000 20 372 7.4E-89 T 12-10-2018 IPR023214 HAD superfamily TDE_1977 750a1ea89276fcff505427cc5c825818 396 Gene3D G3DSA:1.20.1440.320 66 219 7.4E-89 T 12-10-2018 TDE_1977 750a1ea89276fcff505427cc5c825818 396 Pfam PF12710 haloacid dehalogenase-like hydrolase 185 327 5.2E-8 T 12-10-2018 TDE_1977 750a1ea89276fcff505427cc5c825818 396 SUPERFAMILY SSF56784 181 331 1.25E-16 T 12-10-2018 IPR036412 HAD-like superfamily TDE_1712 ef41e1310131d05832b416a8ddfd7640 349 PIRSF PIRSF002892 1 349 8.4E-169 T 12-10-2018 IPR016369 Flagellar filament outer layer protein FlaA, Spirochaetes TDE_1712 ef41e1310131d05832b416a8ddfd7640 349 Pfam PF04620 Flagellar filament outer layer protein Flaa 43 291 5.7E-97 T 12-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 TDE_2720 d23098e08e13f9b6a05bcbf8c05a08a4 278 SUPERFAMILY SSF75217 107 277 1.1E-30 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases TDE_2720 d23098e08e13f9b6a05bcbf8c05a08a4 278 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 26 270 1.9E-31 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TDE_2720 d23098e08e13f9b6a05bcbf8c05a08a4 278 Gene3D G3DSA:3.40.1280.10 23 276 8.7E-29 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TDE_2720 d23098e08e13f9b6a05bcbf8c05a08a4 278 Pfam PF04452 RNA methyltransferase 39 271 5.3E-55 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TDE_2720 d23098e08e13f9b6a05bcbf8c05a08a4 278 PIRSF PIRSF015601 21 277 1.5E-43 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TDE_2204 557f890b96c0424bae69ec4cea19ab81 433 Pfam PF03553 Na+/H+ antiporter family 142 426 2.4E-63 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 TDE_2204 557f890b96c0424bae69ec4cea19ab81 433 Pfam PF13726 Na+-H+ antiporter family 3 89 7.1E-29 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal TDE_1429 936f2c7c5742f6421c3387a911505652 327 Pfam PF00535 Glycosyl transferase family 2 4 111 9.1E-29 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TDE_1429 936f2c7c5742f6421c3387a911505652 327 SUPERFAMILY SSF53448 2 205 8.44E-45 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1429 936f2c7c5742f6421c3387a911505652 327 Gene3D G3DSA:3.90.550.10 2 196 1.1E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_2380 38bfb29f10bb1ace820cfce7124d8633 387 Pfam PF12698 ABC-2 family transporter protein 24 372 5.5E-24 T 12-10-2018 TDE_0256 a98033610f41cc8e6410f197ae04624e 232 Pfam PF02361 Cobalt transport protein 5 195 1.1E-14 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_0882 035f332e8825066575120b4d887c6b0d 77 Hamap MF_00088 UPF0109 protein . 2 76 22.589 T 12-10-2018 IPR020627 Uncharacterised protein family UPF0109 TDE_0882 035f332e8825066575120b4d887c6b0d 77 SUPERFAMILY SSF54814 5 63 4.9E-8 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TDE_0882 035f332e8825066575120b4d887c6b0d 77 Pfam PF13083 KH domain 3 75 7.9E-25 T 12-10-2018 TDE_0882 035f332e8825066575120b4d887c6b0d 77 Gene3D G3DSA:3.30.300.20 5 70 2.8E-6 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Gene3D G3DSA:3.30.70.20 677 800 3.2E-38 T 12-10-2018 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 SMART SM00890 630 687 3.1E-28 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Gene3D G3DSA:3.40.50.920 261 423 3.3E-62 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 249 3.9E-79 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 271 355 1.2E-13 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 SUPERFAMILY SSF52518 807 1184 5.05E-127 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 971 1083 1.2E-10 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 SUPERFAMILY SSF52922 261 422 2.14E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 PIRSF PIRSF000159 2 1186 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 697 708 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Gene3D G3DSA:3.40.920.10 425 632 2.9E-85 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Gene3D G3DSA:3.40.50.970 805 1184 8.0E-160 T 12-10-2018 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 SUPERFAMILY SSF54862 673 846 8.04E-23 T 12-10-2018 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Pfam PF12838 4Fe-4S dicluster domain 697 765 1.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 SUPERFAMILY SSF53323 424 676 3.53E-83 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 434 617 6.6E-29 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 7 1183 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 753 764 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Pfam PF10371 Domain of unknown function 634 686 2.8E-21 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 Gene3D G3DSA:3.40.50.970 4 260 1.5E-105 T 12-10-2018 TDE_0665 a41319b0bc5bac20ff246ec26cb4a4ed 1186 SUPERFAMILY SSF52518 5 260 4.32E-74 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 SUPERFAMILY SSF53335 37 379 6.52E-57 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 68 74 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 315 337 2.9E-14 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 99 118 2.9E-14 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 339 353 2.9E-14 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 65 77 2.9E-14 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 Gene3D G3DSA:3.40.50.150 235 379 7.1E-15 T 12-10-2018 TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 Gene3D G3DSA:3.40.50.150 41 231 1.1E-31 T 12-10-2018 TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 Pfam PF01555 DNA methylase 65 359 2.4E-38 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 TDE_0099 a86ffaba3ed1a95b40c8485292ba0c68 428 PIRSF PIRSF015855 3 424 1.3E-103 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 TDE_1590 faab72a051f051013d5f82965bcd1509 341 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 336 6.3E-28 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TDE_1590 faab72a051f051013d5f82965bcd1509 341 Gene3D G3DSA:3.90.1150.10 226 340 1.7E-6 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_1590 faab72a051f051013d5f82965bcd1509 341 Gene3D G3DSA:3.40.640.10 1 225 8.2E-29 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_1590 faab72a051f051013d5f82965bcd1509 341 SUPERFAMILY SSF53383 2 337 7.03E-34 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_0711 07d95fc9e2b112bebcadef55a702a077 163 Pfam PF12821 Threonine/Serine exporter, ThrE 7 133 1.9E-36 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE TDE_2555 38c58ec86912b3b810d930a4d29682bb 207 SUPERFAMILY SSF63965 7 206 3.27E-68 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TDE_2555 38c58ec86912b3b810d930a4d29682bb 207 Pfam PF02570 Precorrin-8X methylmutase 8 202 6.8E-74 T 12-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 TDE_2555 38c58ec86912b3b810d930a4d29682bb 207 Gene3D G3DSA:3.40.50.10230 2 207 4.0E-78 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TDE_1940 977a300269b676281b0165608efa748a 354 Gene3D G3DSA:1.25.40.10 28 213 3.7E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1940 977a300269b676281b0165608efa748a 354 SUPERFAMILY SSF48452 81 200 1.14E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0167 78c6466be71c5c8b4a267f7bec6ddcf6 233 Pfam PF00005 ABC transporter 22 156 7.7E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0167 78c6466be71c5c8b4a267f7bec6ddcf6 233 Gene3D G3DSA:3.40.50.300 1 230 5.4E-45 T 12-10-2018 TDE_0167 78c6466be71c5c8b4a267f7bec6ddcf6 233 SMART SM00382 30 205 2.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0167 78c6466be71c5c8b4a267f7bec6ddcf6 233 SUPERFAMILY SSF52540 3 218 2.83E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2532 02dcf2a36e69dcc74b425114f06b0237 143 SUPERFAMILY SSF88723 7 126 4.49E-22 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_2532 02dcf2a36e69dcc74b425114f06b0237 143 Gene3D G3DSA:3.40.50.1010 7 134 1.5E-17 T 12-10-2018 TDE_2532 02dcf2a36e69dcc74b425114f06b0237 143 Pfam PF01850 PIN domain 8 123 8.9E-14 T 12-10-2018 IPR002716 PIN domain TDE_0958 fc09fd4c41e5829b6b75d5a324b32629 303 Gene3D G3DSA:3.40.1090.10 1 116 1.3E-25 T 12-10-2018 TDE_0958 fc09fd4c41e5829b6b75d5a324b32629 303 SUPERFAMILY SSF52151 1 278 6.02E-48 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TDE_0958 fc09fd4c41e5829b6b75d5a324b32629 303 Pfam PF01734 Patatin-like phospholipase 5 186 1.0E-23 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TDE_0958 fc09fd4c41e5829b6b75d5a324b32629 303 Gene3D G3DSA:3.40.1090.20 117 201 3.8E-6 T 12-10-2018 TDE_2477 b7ad5e6a2dd6ab4830d444c9f45f7cad 448 Pfam PF03841 L-seryl-tRNA selenium transferase 82 428 2.5E-109 T 12-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 TDE_2477 b7ad5e6a2dd6ab4830d444c9f45f7cad 448 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 445 3.0E-158 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 TDE_2477 b7ad5e6a2dd6ab4830d444c9f45f7cad 448 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 448 157.157 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 TDE_2477 b7ad5e6a2dd6ab4830d444c9f45f7cad 448 Gene3D G3DSA:3.40.640.10 94 349 5.5E-137 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_2477 b7ad5e6a2dd6ab4830d444c9f45f7cad 448 Gene3D G3DSA:3.90.1150.110 12 434 5.5E-137 T 12-10-2018 TDE_2477 b7ad5e6a2dd6ab4830d444c9f45f7cad 448 SUPERFAMILY SSF53383 77 448 1.46E-42 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_2106 47d71df1da2ed3f28ff208ef5abe2ee4 95 Gene3D G3DSA:3.10.450.530 1 86 4.1E-18 T 12-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily TDE_2106 47d71df1da2ed3f28ff208ef5abe2ee4 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 84 4.3E-23 T 12-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system TDE_1272 77adf144b7323edd279a9d618354f418 328 SUPERFAMILY SSF52540 4 253 7.59E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1272 77adf144b7323edd279a9d618354f418 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 316 1.8E-25 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1272 77adf144b7323edd279a9d618354f418 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 1.2E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1272 77adf144b7323edd279a9d618354f418 328 Gene3D G3DSA:3.40.50.300 1 328 2.2E-100 T 12-10-2018 TDE_1272 77adf144b7323edd279a9d618354f418 328 Pfam PF00005 ABC transporter 25 182 1.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1272 77adf144b7323edd279a9d618354f418 328 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1272 77adf144b7323edd279a9d618354f418 328 SMART SM00382 33 232 2.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0660 43bb717f48b14cbf0f0a09cc79ada992 301 Gene3D G3DSA:1.10.10.10 1 61 2.4E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0660 43bb717f48b14cbf0f0a09cc79ada992 301 Pfam PF08279 HTH domain 5 56 9.8E-14 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 TDE_0660 43bb717f48b14cbf0f0a09cc79ada992 301 Pfam PF13280 WYL domain 128 294 2.9E-32 T 12-10-2018 IPR026881 WYL domain TDE_0660 43bb717f48b14cbf0f0a09cc79ada992 301 SUPERFAMILY SSF46785 1 59 1.23E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0660 43bb717f48b14cbf0f0a09cc79ada992 301 PIRSF PIRSF016838 1 300 4.9E-32 T 12-10-2018 IPR028349 Protein PafC TDE_2286 35135aa37c53fab47f9e5dec716e2c19 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 184 243 7.7E-11 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TDE_2286 35135aa37c53fab47f9e5dec716e2c19 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 32 110 4.0E-20 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TDE_2286 35135aa37c53fab47f9e5dec716e2c19 281 Gene3D G3DSA:1.10.287.1080 5 144 1.5E-35 T 12-10-2018 TDE_2286 35135aa37c53fab47f9e5dec716e2c19 281 SUPERFAMILY SSF101386 9 114 1.64E-21 T 12-10-2018 TDE_2286 35135aa37c53fab47f9e5dec716e2c19 281 TIGRFAM TIGR00444 mazG: MazG family protein 16 274 2.5E-76 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG TDE_2286 35135aa37c53fab47f9e5dec716e2c19 281 Gene3D G3DSA:1.10.287.1080 148 279 1.3E-41 T 12-10-2018 TDE_2286 35135aa37c53fab47f9e5dec716e2c19 281 SUPERFAMILY SSF101386 154 254 1.1E-23 T 12-10-2018 TDE_0999 a07aca61f5600fd0827b6ff61ce8e033 278 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site TDE_0999 a07aca61f5600fd0827b6ff61ce8e033 278 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 24 276 6.6E-74 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 TDE_0999 a07aca61f5600fd0827b6ff61ce8e033 278 Gene3D G3DSA:1.20.1080.10 2 265 4.1E-90 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 TDE_0999 a07aca61f5600fd0827b6ff61ce8e033 278 Pfam PF01226 Formate/nitrite transporter 11 273 3.7E-79 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 TDE_0999 a07aca61f5600fd0827b6ff61ce8e033 278 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site TDE_2349 096775c26a7449714ad432f300b0cfeb 234 SUPERFAMILY SSF48371 100 229 4.37E-8 T 12-10-2018 IPR016024 Armadillo-type fold TDE_2349 096775c26a7449714ad432f300b0cfeb 234 Gene3D G3DSA:1.25.10.110 98 169 7.3E-8 T 12-10-2018 TDE_2349 096775c26a7449714ad432f300b0cfeb 234 Pfam PF13646 HEAT repeats 102 154 2.7E-8 T 12-10-2018 TDE_1825 12129a512beecd46f86868d21aafacdc 364 Gene3D G3DSA:3.30.40.60 1 72 1.4E-7 T 12-10-2018 TDE_1825 12129a512beecd46f86868d21aafacdc 364 Pfam PF14279 HNH endonuclease 4 57 4.0E-20 T 12-10-2018 IPR029471 HNH endonuclease 5 TDE_0746 b8c81fb0633bbb903300c34b80d8dfed 392 Pfam PF00005 ABC transporter 21 168 1.4E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0746 b8c81fb0633bbb903300c34b80d8dfed 392 Gene3D G3DSA:3.40.50.300 2 249 3.8E-51 T 12-10-2018 TDE_0746 b8c81fb0633bbb903300c34b80d8dfed 392 ProDom PD064925 ATP-BINDING ABC NUCLEOTIDE-BINDING MEMBRANE TRANSPORTER IRON TRANSPORTER COMPOUND ATPASE III 289 364 5.0E-36 T 12-10-2018 IPR020322 Uncharacterised domain MJ0874 TDE_0746 b8c81fb0633bbb903300c34b80d8dfed 392 SUPERFAMILY SSF52540 4 232 4.55E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0746 b8c81fb0633bbb903300c34b80d8dfed 392 SMART SM00382 28 217 2.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1210 86bc6fb849fe8b1fdfce6b5f8c04b4f0 178 Gene3D G3DSA:3.60.20.10 3 178 1.5E-64 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TDE_1210 86bc6fb849fe8b1fdfce6b5f8c04b4f0 178 PIRSF PIRSF039093 1 178 5.9E-89 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TDE_1210 86bc6fb849fe8b1fdfce6b5f8c04b4f0 178 SUPERFAMILY SSF56235 5 178 1.16E-56 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TDE_1210 86bc6fb849fe8b1fdfce6b5f8c04b4f0 178 Pfam PF00227 Proteasome subunit 7 174 2.7E-21 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 TDE_1210 86bc6fb849fe8b1fdfce6b5f8c04b4f0 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 7 178 41.08 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TDE_1210 86bc6fb849fe8b1fdfce6b5f8c04b4f0 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 8 178 2.3E-84 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TDE_0134 d8477360b59fe7426139ae5e80d853f2 508 Pfam PF04324 BFD-like [2Fe-2S] binding domain 421 475 7.0E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TDE_0134 d8477360b59fe7426139ae5e80d853f2 508 Pfam PF01266 FAD dependent oxidoreductase 17 371 2.7E-54 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TDE_0134 d8477360b59fe7426139ae5e80d853f2 508 Gene3D G3DSA:3.50.50.60 17 368 1.6E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0134 d8477360b59fe7426139ae5e80d853f2 508 Gene3D G3DSA:1.10.10.1100 407 484 5.9E-20 T 12-10-2018 TDE_0134 d8477360b59fe7426139ae5e80d853f2 508 SUPERFAMILY SSF51905 16 372 6.8E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0134 d8477360b59fe7426139ae5e80d853f2 508 Gene3D G3DSA:3.30.9.10 100 334 1.6E-95 T 12-10-2018 TDE_0396 5a5489214acdeb777131bf3aaa1382e2 322 SUPERFAMILY SSF52540 4 253 6.07E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0396 5a5489214acdeb777131bf3aaa1382e2 322 Pfam PF00005 ABC transporter 24 181 5.7E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0396 5a5489214acdeb777131bf3aaa1382e2 322 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0396 5a5489214acdeb777131bf3aaa1382e2 322 SMART SM00382 33 248 2.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0396 5a5489214acdeb777131bf3aaa1382e2 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 1.4E-23 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0396 5a5489214acdeb777131bf3aaa1382e2 322 Gene3D G3DSA:3.40.50.300 1 322 8.9E-83 T 12-10-2018 TDE_0396 5a5489214acdeb777131bf3aaa1382e2 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.0E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0408 a4263f4a6d8604354f6962f63c072354 278 SUPERFAMILY SSF63380 2 92 1.48E-18 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TDE_0408 a4263f4a6d8604354f6962f63c072354 278 Gene3D G3DSA:2.40.30.10 1 92 3.2E-20 T 12-10-2018 TDE_0408 a4263f4a6d8604354f6962f63c072354 278 Pfam PF00175 Oxidoreductase NAD-binding domain 105 198 2.3E-7 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TDE_0408 a4263f4a6d8604354f6962f63c072354 278 SUPERFAMILY SSF52343 89 249 3.54E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TDE_0408 a4263f4a6d8604354f6962f63c072354 278 PIRSF PIRSF006816 1 256 1.2E-69 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 TDE_0408 a4263f4a6d8604354f6962f63c072354 278 Gene3D G3DSA:3.40.50.80 100 204 5.2E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TDE_0408 a4263f4a6d8604354f6962f63c072354 278 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 213 250 2.4E-14 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain TDE_2428 f3e2efa50f31c7b4cd328baf20ecfff6 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 2.2E-26 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2428 f3e2efa50f31c7b4cd328baf20ecfff6 56 Gene3D G3DSA:2.20.28.120 1 55 1.3E-22 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2428 f3e2efa50f31c7b4cd328baf20ecfff6 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 17.553 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2428 f3e2efa50f31c7b4cd328baf20ecfff6 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_2428 f3e2efa50f31c7b4cd328baf20ecfff6 56 Pfam PF00471 Ribosomal protein L33 9 54 5.0E-22 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2428 f3e2efa50f31c7b4cd328baf20ecfff6 56 SUPERFAMILY SSF57829 3 54 1.4E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 SUPERFAMILY SSF58104 415 650 1.7E-45 T 12-10-2018 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 5.4E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 5.4E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 581 610 5.4E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 5.4E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 SMART SM00283 406 653 5.0E-61 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 Gene3D G3DSA:1.10.287.950 377 695 3.2E-48 T 12-10-2018 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 Pfam PF02743 Cache domain 37 271 2.8E-27 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 SMART SM00304 309 363 1.7E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 621 1.8E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 SUPERFAMILY SSF103190 65 182 6.02E-9 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_0181 60c130637c7279081a2ea7420e3e606b 696 SUPERFAMILY SSF58104 331 432 3.14E-9 T 12-10-2018 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 Pfam PF00672 HAMP domain 310 356 4.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 Gene3D G3DSA:1.20.1480.50 276 366 2.0E-7 T 12-10-2018 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 Gene3D G3DSA:3.30.450.20 175 275 9.9E-19 T 12-10-2018 TDE_0181 60c130637c7279081a2ea7420e3e606b 696 Gene3D G3DSA:3.30.450.20 121 174 9.9E-19 T 12-10-2018 TDE_2710 29557cfa646d335053f536c487dfa895 454 PIRSF PIRSF006603 7 454 2.4E-69 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_2710 29557cfa646d335053f536c487dfa895 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 412 2.0E-53 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_2710 29557cfa646d335053f536c487dfa895 454 Pfam PF01554 MatE 252 411 3.9E-18 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_2710 29557cfa646d335053f536c487dfa895 454 Pfam PF01554 MatE 32 191 4.3E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_1623 28ddd6b6ada692581754ee846d4d8f11 320 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 6 82 1.2E-16 T 12-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 TDE_2418 bf89adb943201db7d84fcc33a906c4d1 167 Pfam PF04191 Phospholipid methyltransferase 52 149 1.8E-12 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 TDE_2418 bf89adb943201db7d84fcc33a906c4d1 167 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 115 160 2.0E-20 T 12-10-2018 TDE_2418 bf89adb943201db7d84fcc33a906c4d1 167 Gene3D G3DSA:1.20.120.1630 1 162 8.3E-29 T 12-10-2018 TDE_1760 1844d5167886e9a90b968fcce1d6dd9d 221 Pfam PF01966 HD domain 34 131 3.2E-7 T 12-10-2018 IPR006674 HD domain TDE_1760 1844d5167886e9a90b968fcce1d6dd9d 221 Gene3D G3DSA:1.20.58.1910 107 221 1.1E-45 T 12-10-2018 TDE_1760 1844d5167886e9a90b968fcce1d6dd9d 221 Gene3D G3DSA:1.10.472.50 7 105 1.4E-28 T 12-10-2018 TDE_1760 1844d5167886e9a90b968fcce1d6dd9d 221 SUPERFAMILY SSF109604 10 218 1.82E-67 T 12-10-2018 TDE_1760 1844d5167886e9a90b968fcce1d6dd9d 221 SMART SM00471 27 141 1.9E-9 T 12-10-2018 IPR003607 HD/PDEase domain TDE_0989 3bdce0cfb27d5a552e136028b6668387 78 Gene3D G3DSA:3.30.920.30 12 69 6.9E-5 T 12-10-2018 IPR038570 HicA superfamily TDE_0989 3bdce0cfb27d5a552e136028b6668387 78 SUPERFAMILY SSF54786 12 69 4.32E-5 T 12-10-2018 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 SUPERFAMILY SSF51735 1 177 1.29E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 SUPERFAMILY SSF55347 162 330 2.68E-72 T 12-10-2018 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 SMART SM00846 1 163 3.3E-76 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 161 168 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 Gene3D G3DSA:3.30.360.10 164 334 2.3E-148 T 12-10-2018 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 Gene3D G3DSA:3.40.50.720 2 346 2.3E-148 T 12-10-2018 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 242 259 9.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 297 9.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 185 201 9.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 115 128 9.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 157 175 9.3E-45 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 PIRSF PIRSF000149 1 349 2.9E-128 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 109 2.7E-33 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 2 342 2.4E-130 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1488 569f29d6b306ec3bd3a0a2a5fa60cef4 349 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 168 330 1.9E-65 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 PIRSF PIRSF005677 1 560 2.2E-247 T 12-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 SUPERFAMILY SSF53784 5 548 4.58E-168 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 301 313 1.2E-12 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 76 95 1.2E-12 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 255 1.2E-12 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 198 215 1.2E-12 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 165 181 1.2E-12 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 Pfam PF00365 Phosphofructokinase 74 335 3.7E-40 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 TIGRFAM TIGR02477 PFKA_PPi: diphosphate--fructose-6-phosphate 1-phosphotransferase 6 550 2.5E-272 T 12-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 Gene3D G3DSA:3.40.50.460 219 534 5.5E-235 T 12-10-2018 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 Gene3D G3DSA:3.40.50.450 10 500 5.5E-235 T 12-10-2018 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 Hamap MF_01980 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 552 44.622 T 12-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TDE_1550 5b1d82971fad6c6b28e804158aeca3d5 560 Gene3D G3DSA:1.10.10.480 317 391 5.5E-235 T 12-10-2018 TDE_0117 078eafb53b93b481671240f89aa89bab 304 Gene3D G3DSA:3.40.30.10 28 152 4.2E-7 T 12-10-2018 TDE_0117 078eafb53b93b481671240f89aa89bab 304 SUPERFAMILY SSF52833 42 151 6.71E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily TDE_2233 f7427838df367ddaf9621db6e0d5ee13 339 Pfam PF01032 FecCD transport family 14 333 6.0E-94 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TDE_2233 f7427838df367ddaf9621db6e0d5ee13 339 Gene3D G3DSA:1.10.3470.10 2 339 2.2E-95 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_2233 f7427838df367ddaf9621db6e0d5ee13 339 SUPERFAMILY SSF81345 4 334 3.4E-74 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_0047 49f87efdaf6665190816aea315002002 413 Pfam PF01979 Amidohydrolase family 61 403 2.2E-22 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TDE_0047 49f87efdaf6665190816aea315002002 413 TIGRFAM TIGR01224 hutI: imidazolonepropionase 27 401 3.5E-139 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_0047 49f87efdaf6665190816aea315002002 413 SUPERFAMILY SSF51556 65 364 1.82E-79 T 12-10-2018 IPR032466 Metal-dependent hydrolase TDE_0047 49f87efdaf6665190816aea315002002 413 Gene3D G3DSA:2.30.40.10 21 401 1.7E-160 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TDE_0047 49f87efdaf6665190816aea315002002 413 Hamap MF_00372 Imidazolonepropionase [hutI]. 1 403 40.405 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 TDE_0047 49f87efdaf6665190816aea315002002 413 SUPERFAMILY SSF51338 18 410 1.52E-21 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TDE_0047 49f87efdaf6665190816aea315002002 413 Gene3D G3DSA:3.20.20.140 65 363 1.7E-160 T 12-10-2018 TDE_2123 575e5518819f4992933d6855bf80d130 101 Gene3D G3DSA:3.30.1390.10 2 101 8.4E-36 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TDE_2123 575e5518819f4992933d6855bf80d130 101 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 19 97 4.6E-31 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 TDE_2123 575e5518819f4992933d6855bf80d130 101 SUPERFAMILY SSF54736 18 100 8.37E-28 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TDE_2123 575e5518819f4992933d6855bf80d130 101 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 3 96 23.743 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 Gene3D G3DSA:3.40.1390.10 14 91 1.4E-15 T 12-10-2018 TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 SUPERFAMILY SSF63418 14 124 1.57E-19 T 12-10-2018 IPR035911 MurE/MurF, N-terminal TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 Gene3D G3DSA:3.40.1190.10 109 330 6.1E-49 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 15 472 27.271 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 Pfam PF08245 Mur ligase middle domain 133 313 1.6E-36 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 Pfam PF01225 Mur ligase family, catalytic domain 39 116 6.7E-7 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 Pfam PF02875 Mur ligase family, glutamate ligase domain 335 413 4.4E-8 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 Gene3D G3DSA:3.90.190.20 336 475 1.5E-32 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 SUPERFAMILY SSF53244 336 470 8.24E-27 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 43 470 1.4E-111 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_1200 bb8a29351c63329e58f82b6dd903710d 476 SUPERFAMILY SSF53623 128 331 3.66E-37 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_0437 45c14291e68353a77c59469a60e8e1b9 489 SUPERFAMILY SSF48371 130 320 2.26E-23 T 12-10-2018 IPR016024 Armadillo-type fold TDE_0437 45c14291e68353a77c59469a60e8e1b9 489 Gene3D G3DSA:1.25.10.10 108 377 9.5E-26 T 12-10-2018 IPR011989 Armadillo-like helical TDE_0437 45c14291e68353a77c59469a60e8e1b9 489 Pfam PF13646 HEAT repeats 289 373 4.8E-7 T 12-10-2018 TDE_0437 45c14291e68353a77c59469a60e8e1b9 489 Pfam PF13646 HEAT repeats 206 278 1.3E-10 T 12-10-2018 TDE_0437 45c14291e68353a77c59469a60e8e1b9 489 SMART SM00567 E-Z type HEAT repeats 204 233 910.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TDE_0437 45c14291e68353a77c59469a60e8e1b9 489 SMART SM00567 E-Z type HEAT repeats 237 266 0.0031 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TDE_0437 45c14291e68353a77c59469a60e8e1b9 489 SMART SM00567 E-Z type HEAT repeats 331 360 100.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TDE_2451 8808e608c58690fcce0d0bd9faef412f 347 Pfam PF02547 Queuosine biosynthesis protein 4 346 6.8E-129 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TDE_2451 8808e608c58690fcce0d0bd9faef412f 347 Gene3D G3DSA:2.40.10.240 64 167 3.6E-118 T 12-10-2018 TDE_2451 8808e608c58690fcce0d0bd9faef412f 347 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 347 43.799 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TDE_2451 8808e608c58690fcce0d0bd9faef412f 347 SUPERFAMILY SSF111337 1 347 2.88E-123 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TDE_2451 8808e608c58690fcce0d0bd9faef412f 347 Gene3D G3DSA:3.40.1780.10 14 346 3.6E-118 T 12-10-2018 TDE_2451 8808e608c58690fcce0d0bd9faef412f 347 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 347 8.5E-129 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TDE_1983 09d310e084b586dac7471c991fcb4c55 987 SMART SM00710 597 617 3200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1983 09d310e084b586dac7471c991fcb4c55 987 SMART SM00710 565 591 980.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1983 09d310e084b586dac7471c991fcb4c55 987 SMART SM00710 543 564 0.49 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1983 09d310e084b586dac7471c991fcb4c55 987 Pfam PF13306 Leucine rich repeats (6 copies) 805 930 1.2E-12 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_1983 09d310e084b586dac7471c991fcb4c55 987 SUPERFAMILY SSF51126 474 643 5.16E-11 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_1983 09d310e084b586dac7471c991fcb4c55 987 Gene3D G3DSA:3.80.10.10 715 863 7.1E-10 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1983 09d310e084b586dac7471c991fcb4c55 987 Gene3D G3DSA:3.80.10.10 864 939 2.7E-10 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_1217 18331744cf210892b9058fd0f9061811 308 Pfam PF02108 Flagellar assembly protein FliH 162 289 3.9E-28 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE TDE_2103 387ed472bf941bcc98f33d14946dfb63 288 Pfam PF00535 Glycosyl transferase family 2 2 126 1.8E-19 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TDE_2103 387ed472bf941bcc98f33d14946dfb63 288 Gene3D G3DSA:3.90.550.10 1 191 2.1E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_2103 387ed472bf941bcc98f33d14946dfb63 288 SUPERFAMILY SSF53448 3 212 1.27E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1650 307d9b654884b77c74eb4653e42cd77b 246 Pfam PF00005 ABC transporter 29 161 5.1E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1650 307d9b654884b77c74eb4653e42cd77b 246 SMART SM00382 38 218 6.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1650 307d9b654884b77c74eb4653e42cd77b 246 SUPERFAMILY SSF52540 5 222 3.29E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1650 307d9b654884b77c74eb4653e42cd77b 246 Gene3D G3DSA:3.40.50.300 2 241 3.9E-52 T 12-10-2018 TDE_1650 307d9b654884b77c74eb4653e42cd77b 246 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0996 f33aa03148fd1b0924d0bfe025248435 477 SUPERFAMILY SSF48208 7 406 9.35E-61 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TDE_0996 f33aa03148fd1b0924d0bfe025248435 477 Gene3D G3DSA:1.50.10.10 21 375 5.7E-49 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TDE_0996 f33aa03148fd1b0924d0bfe025248435 477 Pfam PF01204 Trehalase 152 340 1.1E-12 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 TDE_0802 e270f8c40b9277878db753e6144c04f9 211 Gene3D G3DSA:3.40.50.720 3 211 6.6E-47 T 12-10-2018 TDE_0802 e270f8c40b9277878db753e6144c04f9 211 SUPERFAMILY SSF51735 1 209 9.17E-24 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0802 e270f8c40b9277878db753e6144c04f9 211 Pfam PF13460 NAD(P)H-binding 8 195 1.5E-15 T 12-10-2018 IPR016040 NAD(P)-binding domain TDE_1013 39de613082de782221f077ca2b5bbe5f 137 SUPERFAMILY SSF47188 3 131 1.31E-34 T 12-10-2018 IPR035938 Hemerythrin-like superfamily TDE_1013 39de613082de782221f077ca2b5bbe5f 137 ProSitePatterns PS00550 Hemerythrin family signature. 61 84 - T 12-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 TDE_1013 39de613082de782221f077ca2b5bbe5f 137 Pfam PF01814 Hemerythrin HHE cation binding domain 14 127 5.4E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TDE_1013 39de613082de782221f077ca2b5bbe5f 137 Gene3D G3DSA:1.20.120.50 1 136 2.4E-38 T 12-10-2018 IPR035938 Hemerythrin-like superfamily TDE_1013 39de613082de782221f077ca2b5bbe5f 137 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 7 131 1.9E-40 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 TDE_1592 4dc6e73f5b826dba3c87603ddb548034 550 Gene3D G3DSA:3.40.50.300 283 549 3.0E-40 T 12-10-2018 TDE_1592 4dc6e73f5b826dba3c87603ddb548034 550 SUPERFAMILY SSF52540 296 522 1.59E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1592 4dc6e73f5b826dba3c87603ddb548034 550 Pfam PF12848 ABC transporter 224 309 9.1E-18 T 12-10-2018 IPR032781 ABC-transporter extension domain TDE_1592 4dc6e73f5b826dba3c87603ddb548034 550 SUPERFAMILY SSF52540 7 238 3.11E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1592 4dc6e73f5b826dba3c87603ddb548034 550 Pfam PF00005 ABC transporter 18 184 6.0E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1592 4dc6e73f5b826dba3c87603ddb548034 550 SMART SM00382 26 231 5.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1592 4dc6e73f5b826dba3c87603ddb548034 550 SMART SM00382 350 517 1.4 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1592 4dc6e73f5b826dba3c87603ddb548034 550 Gene3D G3DSA:3.40.50.300 2 279 6.5E-62 T 12-10-2018 TDE_1592 4dc6e73f5b826dba3c87603ddb548034 550 Pfam PF00005 ABC transporter 341 472 4.9E-13 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1017 037f5f8bb1a4ce565e17dbc2bb8b5613 398 Pfam PF02601 Exonuclease VII, large subunit 313 391 1.1E-9 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 TDE_1017 037f5f8bb1a4ce565e17dbc2bb8b5613 398 Pfam PF02601 Exonuclease VII, large subunit 122 336 3.7E-69 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 TDE_1017 037f5f8bb1a4ce565e17dbc2bb8b5613 398 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 394 2.7E-136 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TDE_1017 037f5f8bb1a4ce565e17dbc2bb8b5613 398 Pfam PF13742 OB-fold nucleic acid binding domain 5 97 2.9E-28 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 TDE_1017 037f5f8bb1a4ce565e17dbc2bb8b5613 398 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 394 26.439 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TDE_0719 a990db95a96422104d1a7ec808a219f5 717 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 6 713 7.9E-185 T 12-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 TDE_0719 a990db95a96422104d1a7ec808a219f5 717 SUPERFAMILY SSF90123 151 462 1.19E-68 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0719 a990db95a96422104d1a7ec808a219f5 717 Pfam PF00005 ABC transporter 495 644 1.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0719 a990db95a96422104d1a7ec808a219f5 717 SUPERFAMILY SSF52540 471 713 1.96E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0719 a990db95a96422104d1a7ec808a219f5 717 SMART SM00382 504 685 3.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0719 a990db95a96422104d1a7ec808a219f5 717 Pfam PF03412 Peptidase C39 family 3 137 3.2E-38 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TDE_0719 a990db95a96422104d1a7ec808a219f5 717 Gene3D G3DSA:3.40.50.300 469 716 4.0E-87 T 12-10-2018 TDE_0719 a990db95a96422104d1a7ec808a219f5 717 ProSitePatterns PS00211 ABC transporters family signature. 616 630 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0719 a990db95a96422104d1a7ec808a219f5 717 Gene3D G3DSA:1.20.1560.10 148 463 5.9E-80 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0719 a990db95a96422104d1a7ec808a219f5 717 Pfam PF00664 ABC transporter transmembrane region 165 433 5.6E-46 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0719 a990db95a96422104d1a7ec808a219f5 717 Gene3D G3DSA:3.90.70.10 1 146 1.2E-45 T 12-10-2018 TDE_1162 eb7a43625f48e1628b2c9cd8b8d8f80b 542 SMART SM00470 5 97 6.2E-13 T 12-10-2018 IPR003115 ParB/Sulfiredoxin TDE_1162 eb7a43625f48e1628b2c9cd8b8d8f80b 542 Gene3D G3DSA:1.10.10.2830 88 190 6.2E-18 T 12-10-2018 TDE_1162 eb7a43625f48e1628b2c9cd8b8d8f80b 542 Gene3D G3DSA:3.90.1530.30 18 81 1.3E-13 T 12-10-2018 TDE_1162 eb7a43625f48e1628b2c9cd8b8d8f80b 542 SUPERFAMILY SSF110849 6 84 8.89E-15 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TDE_1162 eb7a43625f48e1628b2c9cd8b8d8f80b 542 SUPERFAMILY SSF109709 90 184 3.4E-19 T 12-10-2018 TDE_1162 eb7a43625f48e1628b2c9cd8b8d8f80b 542 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 15 166 1.6E-27 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TDE_1162 eb7a43625f48e1628b2c9cd8b8d8f80b 542 Pfam PF02195 ParB-like nuclease domain 23 96 2.2E-12 T 12-10-2018 IPR003115 ParB/Sulfiredoxin TDE_2722 90e11e72ee67f5b2af47d1cc29869f3b 402 SUPERFAMILY SSF53067 225 400 4.75E-15 T 12-10-2018 TDE_2722 90e11e72ee67f5b2af47d1cc29869f3b 402 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 202 4.2E-10 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TDE_2722 90e11e72ee67f5b2af47d1cc29869f3b 402 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 301 383 5.9E-11 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TDE_2722 90e11e72ee67f5b2af47d1cc29869f3b 402 SUPERFAMILY SSF53067 7 222 2.92E-19 T 12-10-2018 TDE_2722 90e11e72ee67f5b2af47d1cc29869f3b 402 Gene3D G3DSA:3.30.420.40 268 401 1.9E-15 T 12-10-2018 TDE_2722 90e11e72ee67f5b2af47d1cc29869f3b 402 Gene3D G3DSA:3.30.420.40 3 221 8.8E-18 T 12-10-2018 TDE_2453 9db17cc16c505480dc076367ce798f76 194 Gene3D G3DSA:3.40.1580.10 27 193 1.5E-11 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily TDE_2453 9db17cc16c505480dc076367ce798f76 194 SMART SM00860 40 189 8.9E-7 T 12-10-2018 IPR018958 Knr4/Smi1-like domain TDE_2453 9db17cc16c505480dc076367ce798f76 194 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 40 188 7.7E-19 T 12-10-2018 IPR018958 Knr4/Smi1-like domain TDE_2453 9db17cc16c505480dc076367ce798f76 194 SUPERFAMILY SSF160631 32 191 3.4E-17 T 12-10-2018 TDE_0333 11ea6a0afb6ebb7db3e2c38f7c88a388 451 Pfam PF01554 MatE 245 401 2.7E-12 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0333 11ea6a0afb6ebb7db3e2c38f7c88a388 451 Pfam PF01554 MatE 23 183 2.2E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0333 11ea6a0afb6ebb7db3e2c38f7c88a388 451 PIRSF PIRSF006603 1 447 2.4E-72 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0333 11ea6a0afb6ebb7db3e2c38f7c88a388 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 5.4E-52 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_1541 550b7c963275f29d50a5569c87a62124 320 Gene3D G3DSA:3.60.15.10 54 318 1.1E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_1541 550b7c963275f29d50a5569c87a62124 320 SMART SM00849 61 254 1.8E-5 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_1541 550b7c963275f29d50a5569c87a62124 320 Pfam PF12706 Beta-lactamase superfamily domain 75 279 4.1E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_1541 550b7c963275f29d50a5569c87a62124 320 SUPERFAMILY SSF56281 1 316 3.8E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_2439 0d5babe5aa5fb572909ab7649c586672 363 SUPERFAMILY SSF101821 93 205 1.98E-23 T 12-10-2018 TDE_2439 0d5babe5aa5fb572909ab7649c586672 363 SUPERFAMILY SSF53187 18 361 1.96E-46 T 12-10-2018 TDE_2439 0d5babe5aa5fb572909ab7649c586672 363 Pfam PF05343 M42 glutamyl aminopeptidase 75 354 4.1E-67 T 12-10-2018 IPR008007 Peptidase M42 TDE_2439 0d5babe5aa5fb572909ab7649c586672 363 PIRSF PIRSF001123 17 363 3.3E-30 T 12-10-2018 IPR008007 Peptidase M42 TDE_2439 0d5babe5aa5fb572909ab7649c586672 363 Gene3D G3DSA:2.40.30.40 96 190 3.5E-119 T 12-10-2018 IPR023367 Peptidase M42, domain 2 TDE_2439 0d5babe5aa5fb572909ab7649c586672 363 Gene3D G3DSA:3.40.630.10 27 361 3.5E-119 T 12-10-2018 TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 Gene3D G3DSA:1.10.8.60 295 364 1.3E-19 T 12-10-2018 TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 Pfam PF00308 Bacterial dnaA protein 130 346 1.3E-87 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 SMART SM00760 373 442 7.7E-40 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 7 464 31.391 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 226 240 6.2E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 260 287 6.2E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 423 442 6.2E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 194 208 6.2E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 163 183 6.2E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 Gene3D G3DSA:3.40.50.300 114 293 2.1E-49 T 12-10-2018 TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 374 442 1.3E-29 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 Gene3D G3DSA:3.30.300.180 4 83 8.2E-14 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 10 463 8.3E-164 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 SUPERFAMILY SSF48295 360 465 3.92E-36 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 Pfam PF11638 DnaA N-terminal domain 9 66 5.1E-8 T 12-10-2018 IPR024633 DnaA N-terminal domain TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 SMART SM00382 162 293 9.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 SUPERFAMILY SSF52540 129 340 2.05E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 ProSitePatterns PS01008 DnaA protein signature. 423 442 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TDE_0001 dd75bd697abb6e22f957b9480a0255aa 469 Gene3D G3DSA:1.10.1750.10 365 467 2.4E-35 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 9.5E-38 T 12-10-2018 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 9.5E-38 T 12-10-2018 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.5E-38 T 12-10-2018 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 9.5E-38 T 12-10-2018 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 9.5E-38 T 12-10-2018 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 Gene3D G3DSA:3.50.50.60 8 300 1.1E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 306 8.2E-111 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 295 1.3E-56 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 SUPERFAMILY SSF51905 1 304 2.78E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 Gene3D G3DSA:3.50.50.60 122 244 1.1E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 8.6E-68 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 8.6E-68 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 8.6E-68 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 8.6E-68 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 8.6E-68 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 8.6E-68 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 8.6E-68 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 8.6E-68 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_0743 e458a328d382c4b47c2464fe4316f78b 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 8.6E-68 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 SUPERFAMILY SSF55031 237 388 3.29E-5 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 Pfam PF01546 Peptidase family M20/M25/M40 73 477 1.2E-22 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 Gene3D G3DSA:3.40.630.10 2 281 5.4E-58 T 12-10-2018 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 Gene3D G3DSA:3.40.630.10 349 481 1.0E-25 T 12-10-2018 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 479 2.5E-177 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 SUPERFAMILY SSF53187 10 479 9.02E-60 T 12-10-2018 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.4E-53 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PRINTS PR00934 X-His dipeptidase (M25) signature 360 378 1.4E-53 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.4E-53 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.4E-53 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.4E-53 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PRINTS PR00934 X-His dipeptidase (M25) signature 204 221 1.4E-53 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PRINTS PR00934 X-His dipeptidase (M25) signature 249 268 1.4E-53 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PRINTS PR00934 X-His dipeptidase (M25) signature 425 441 1.4E-53 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PRINTS PR00934 X-His dipeptidase (M25) signature 447 469 1.4E-53 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 PIRSF PIRSF016599 1 481 1.0E-190 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 TDE_2228 d98bde40fedba4281d5dad85f2ec800e 481 Pfam PF07687 Peptidase dimerisation domain 208 282 5.2E-6 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain TDE_0257 d3bffd4f5ad34b7577d8e8252ee9734b 200 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 9 196 4.4E-54 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_0257 d3bffd4f5ad34b7577d8e8252ee9734b 200 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 7 196 2.0E-66 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_0298 4a283487734fb3c930ecc8ba1611677b 652 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 234 623 6.7E-91 T 12-10-2018 IPR018647 Domain of unknown function DUF2075 TDE_0298 4a283487734fb3c930ecc8ba1611677b 652 Gene3D G3DSA:3.40.50.300 230 441 1.3E-6 T 12-10-2018 TDE_0298 4a283487734fb3c930ecc8ba1611677b 652 SUPERFAMILY SSF52540 143 372 5.01E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2214 fbca3aab8d60db1c9a00706ba6afceff 111 SUPERFAMILY SSF143100 1 73 7.85E-12 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like TDE_2214 fbca3aab8d60db1c9a00706ba6afceff 111 Pfam PF05534 HicB family 52 102 1.1E-25 T 12-10-2018 IPR008651 Uncharacterised protein family HicB TDE_2214 fbca3aab8d60db1c9a00706ba6afceff 111 SUPERFAMILY SSF47598 66 109 7.23E-9 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TDE_2214 fbca3aab8d60db1c9a00706ba6afceff 111 Gene3D G3DSA:1.10.1220.10 68 110 4.7E-5 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TDE_1745 be001c6f3fdd3d87f51656c38b4cee19 119 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 111 18.729 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TDE_1745 be001c6f3fdd3d87f51656c38b4cee19 119 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 15 110 5.8E-28 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TDE_1745 be001c6f3fdd3d87f51656c38b4cee19 119 Gene3D G3DSA:3.30.460.10 11 119 4.8E-26 T 12-10-2018 TDE_1745 be001c6f3fdd3d87f51656c38b4cee19 119 Pfam PF02410 Ribosomal silencing factor during starvation 15 110 1.3E-21 T 12-10-2018 TDE_1745 be001c6f3fdd3d87f51656c38b4cee19 119 SUPERFAMILY SSF81301 9 115 9.32E-28 T 12-10-2018 TDE_0689 2c0003cbda80555e3e21b659c6139d7d 400 Pfam PF01636 Phosphotransferase enzyme family 189 278 9.3E-12 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase TDE_0689 2c0003cbda80555e3e21b659c6139d7d 400 Gene3D G3DSA:3.90.1200.10 118 399 2.3E-73 T 12-10-2018 TDE_0689 2c0003cbda80555e3e21b659c6139d7d 400 SUPERFAMILY SSF56112 9 395 8.84E-67 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily TDE_0689 2c0003cbda80555e3e21b659c6139d7d 400 Gene3D G3DSA:3.30.200.20 2 115 4.7E-34 T 12-10-2018 TDE_0689 2c0003cbda80555e3e21b659c6139d7d 400 PIRSF PIRSF031134 1 400 9.0E-143 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 TDE_0689 2c0003cbda80555e3e21b659c6139d7d 400 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 400 131.413 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 TDE_2554 5747d29861da426fc87b18eb72377323 292 SUPERFAMILY SSF64397 4 239 9.68E-51 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 TDE_2554 5747d29861da426fc87b18eb72377323 292 Pfam PF01430 Hsp33 protein 4 280 3.0E-65 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 TDE_2554 5747d29861da426fc87b18eb72377323 292 Gene3D G3DSA:3.90.1280.10 235 290 5.6E-11 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 TDE_2554 5747d29861da426fc87b18eb72377323 292 Gene3D G3DSA:3.55.30.10 4 234 4.5E-53 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 TDE_2554 5747d29861da426fc87b18eb72377323 292 PIRSF PIRSF005261 1 292 7.6E-80 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 TDE_2554 5747d29861da426fc87b18eb72377323 292 SUPERFAMILY SSF118352 233 288 2.22E-12 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 TDE_1914 d023f480e6b40ae300400f1741464f8e 343 SMART SM00382 53 187 1.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1914 d023f480e6b40ae300400f1741464f8e 343 Gene3D G3DSA:3.40.50.300 22 183 1.1E-35 T 12-10-2018 TDE_1914 d023f480e6b40ae300400f1741464f8e 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 10 237 1.5E-103 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 TDE_1914 d023f480e6b40ae300400f1741464f8e 343 SUPERFAMILY SSF52540 22 250 3.12E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1914 d023f480e6b40ae300400f1741464f8e 343 SUPERFAMILY SSF46785 258 332 1.5E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_1914 d023f480e6b40ae300400f1741464f8e 343 Gene3D G3DSA:1.10.8.60 184 258 2.0E-29 T 12-10-2018 TDE_1914 d023f480e6b40ae300400f1741464f8e 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 328 5.5E-141 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TDE_1914 d023f480e6b40ae300400f1741464f8e 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 151.35 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TDE_1914 d023f480e6b40ae300400f1741464f8e 343 Gene3D G3DSA:1.10.10.10 259 336 9.0E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1914 d023f480e6b40ae300400f1741464f8e 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 1.4E-31 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TDE_1914 d023f480e6b40ae300400f1741464f8e 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 333 2.0E-40 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TDE_2128 4390dbd134fd44c211a81c7141dfce3e 429 Pfam PF07690 Major Facilitator Superfamily 16 390 4.1E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TDE_2128 4390dbd134fd44c211a81c7141dfce3e 429 Gene3D G3DSA:1.20.1250.20 3 426 1.4E-34 T 12-10-2018 TDE_2128 4390dbd134fd44c211a81c7141dfce3e 429 SUPERFAMILY SSF103473 4 426 4.84E-36 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_0702 8309fdd5564ff78ee1dcf531c6dd4592 241 Pfam PF00005 ABC transporter 19 162 3.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0702 8309fdd5564ff78ee1dcf531c6dd4592 241 Gene3D G3DSA:3.40.50.300 1 237 3.4E-66 T 12-10-2018 TDE_0702 8309fdd5564ff78ee1dcf531c6dd4592 241 SUPERFAMILY SSF52540 7 222 9.89E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0702 8309fdd5564ff78ee1dcf531c6dd4592 241 SMART SM00382 28 210 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0702 8309fdd5564ff78ee1dcf531c6dd4592 241 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0118 60754c45c1482cc6df9a33995619dad9 157 SUPERFAMILY SSF140566 17 126 3.79E-5 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 TDE_0080 e9a57deaa4dff79f00373a445adaf23b 494 Gene3D G3DSA:3.40.605.10 16 473 4.6E-160 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TDE_0080 e9a57deaa4dff79f00373a445adaf23b 494 Gene3D G3DSA:3.40.309.10 262 456 4.6E-160 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TDE_0080 e9a57deaa4dff79f00373a445adaf23b 494 Pfam PF00171 Aldehyde dehydrogenase family 22 479 1.9E-161 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TDE_0080 e9a57deaa4dff79f00373a445adaf23b 494 SUPERFAMILY SSF53720 6 485 1.7E-149 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TDE_0080 e9a57deaa4dff79f00373a445adaf23b 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TDE_1670 412afa895ff17b660ce1115bff26c3be 182 Gene3D G3DSA:1.10.10.10 23 176 2.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1670 412afa895ff17b660ce1115bff26c3be 182 SMART SM00347 54 158 1.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_1670 412afa895ff17b660ce1115bff26c3be 182 ProSitePatterns PS01117 MarR-type HTH domain signature. 92 127 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TDE_1670 412afa895ff17b660ce1115bff26c3be 182 Pfam PF01047 MarR family 62 117 3.5E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_1670 412afa895ff17b660ce1115bff26c3be 182 SUPERFAMILY SSF46785 42 177 8.98E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0085 75873fe89a95decf614b9291356575a5 1139 Gene3D G3DSA:3.90.320.10 925 1112 1.6E-8 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal TDE_0085 75873fe89a95decf614b9291356575a5 1139 Gene3D G3DSA:3.40.50.300 297 448 1.8E-31 T 12-10-2018 TDE_0085 75873fe89a95decf614b9291356575a5 1139 SUPERFAMILY SSF52540 1 841 8.99E-105 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0085 75873fe89a95decf614b9291356575a5 1139 Pfam PF13361 UvrD-like helicase C-terminal domain 427 836 4.8E-31 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TDE_0085 75873fe89a95decf614b9291356575a5 1139 Gene3D G3DSA:3.40.50.300 510 616 4.2E-19 T 12-10-2018 TDE_0085 75873fe89a95decf614b9291356575a5 1139 SUPERFAMILY SSF52980 944 1107 1.93E-14 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TDE_0085 75873fe89a95decf614b9291356575a5 1139 Gene3D G3DSA:3.40.50.300 2 154 4.1E-35 T 12-10-2018 TDE_0085 75873fe89a95decf614b9291356575a5 1139 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 416 2.5E-57 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TDE_1746 ea8e60dc0a7bc2f836f6b960f8e6e3fa 413 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 300 390 3.6E-9 T 12-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain TDE_1746 ea8e60dc0a7bc2f836f6b960f8e6e3fa 413 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 92 199 9.4E-8 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain TDE_1746 ea8e60dc0a7bc2f836f6b960f8e6e3fa 413 Gene3D G3DSA:1.10.260.150 32 306 2.2E-18 T 12-10-2018 TDE_0365 8c6280678505edb44c824348ff6847f7 232 Gene3D G3DSA:3.30.2010.10 133 226 2.3E-15 T 12-10-2018 TDE_0365 8c6280678505edb44c824348ff6847f7 232 Pfam PF01863 Protein of unknown function DUF45 21 225 5.5E-65 T 12-10-2018 IPR002725 Protein of unknown function DUF45 TDE_0093 500093fe24a2230d66880e40f6957677 323 Gene3D G3DSA:3.90.78.10 236 322 3.6E-28 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_0093 500093fe24a2230d66880e40f6957677 323 SUPERFAMILY SSF56194 221 320 1.7E-31 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_0093 500093fe24a2230d66880e40f6957677 323 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 222 317 1.7E-24 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_0093 500093fe24a2230d66880e40f6957677 323 Gene3D G3DSA:3.30.465.10 97 234 1.5E-31 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TDE_0093 500093fe24a2230d66880e40f6957677 323 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 323 74.299 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_0093 500093fe24a2230d66880e40f6957677 323 Gene3D G3DSA:3.30.43.10 10 90 2.2E-23 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TDE_0093 500093fe24a2230d66880e40f6957677 323 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 25 318 4.7E-71 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TDE_0093 500093fe24a2230d66880e40f6957677 323 Pfam PF01565 FAD binding domain 38 167 7.7E-20 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TDE_0093 500093fe24a2230d66880e40f6957677 323 SUPERFAMILY SSF56176 14 195 6.27E-38 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SUPERFAMILY SSF48452 458 712 1.14E-37 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Gene3D G3DSA:1.25.40.10 239 377 6.2E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Gene3D G3DSA:1.25.40.10 378 502 5.1E-29 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Pfam PF13181 Tetratricopeptide repeat 612 643 0.086 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Pfam PF13181 Tetratricopeptide repeat 543 574 0.15 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Pfam PF13181 Tetratricopeptide repeat 581 610 0.059 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Gene3D G3DSA:1.25.40.10 503 722 1.5E-42 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 475 508 1.1 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 611 644 0.025 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 255 288 78.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 577 610 0.0063 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 339 372 400.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 509 542 0.0057 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 373 406 0.13 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 441 474 4.2E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 645 678 15.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 407 440 1.2 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 679 712 1.7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SMART SM00028 543 576 0.84 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Pfam PF14559 Tetratricopeptide repeat 663 716 1.8E-6 T 12-10-2018 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 SUPERFAMILY SSF48452 263 545 1.62E-34 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Pfam PF13176 Tetratricopeptide repeat 443 473 0.0054 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Pfam PF13432 Tetratricopeptide repeat 377 439 2.3E-5 T 12-10-2018 TDE_1127 0bcf486bab86df5bae74ff05b268f298 725 Pfam PF13424 Tetratricopeptide repeat 477 540 4.1E-7 T 12-10-2018 TDE_0570 092c426bc689af6a57c06a703149f090 235 Pfam PF14848 DNA-binding domain 1 122 9.6E-44 T 12-10-2018 TDE_0570 092c426bc689af6a57c06a703149f090 235 Gene3D G3DSA:4.10.520.10 26 114 6.8E-34 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TDE_0570 092c426bc689af6a57c06a703149f090 235 Gene3D G3DSA:2.70.50.70 115 220 6.8E-34 T 12-10-2018 TDE_0570 092c426bc689af6a57c06a703149f090 235 Pfam PF14734 Domain of unknown function (DUF4469) with IG-like fold 130 224 2.0E-21 T 12-10-2018 IPR027824 Domain of unknown function DUF4469 with IG-like fold TDE_0969 9cd58f61297b327510983ed33b2a6ab3 411 Pfam PF03572 Peptidase family S41 173 387 1.4E-22 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TDE_0969 9cd58f61297b327510983ed33b2a6ab3 411 SUPERFAMILY SSF52096 40 404 3.98E-37 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_2195 28f83cb6800db31ae2e45cd9f3ceb45e 236 Pfam PF00849 RNA pseudouridylate synthase 30 168 1.2E-31 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2195 28f83cb6800db31ae2e45cd9f3ceb45e 236 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 42 56 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2195 28f83cb6800db31ae2e45cd9f3ceb45e 236 Gene3D G3DSA:3.30.2350.10 5 224 2.0E-41 T 12-10-2018 TDE_2195 28f83cb6800db31ae2e45cd9f3ceb45e 236 SUPERFAMILY SSF55120 3 215 4.32E-39 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 Gene3D G3DSA:1.10.1900.20 56 119 3.2E-28 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 Pfam PF00453 Ribosomal protein L20 6 108 9.2E-40 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 24.832 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.2E-44 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 Gene3D G3DSA:1.10.720.90 3 55 2.2E-13 T 12-10-2018 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 2.0E-22 T 12-10-2018 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 SUPERFAMILY SSF74731 5 117 2.62E-40 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.1E-32 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.1E-32 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2154 dc8935434b5a9745ef5c3f18c82eacaf 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.1E-32 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0125 416e956ef6920966af406b408b3ce5b9 371 SMART SM00267 189 364 1.4E-51 T 12-10-2018 IPR000160 GGDEF domain TDE_0125 416e956ef6920966af406b408b3ce5b9 371 Gene3D G3DSA:3.30.450.40 20 202 3.3E-15 T 12-10-2018 IPR029016 GAF-like domain superfamily TDE_0125 416e956ef6920966af406b408b3ce5b9 371 SUPERFAMILY SSF55781 36 199 9.6E-13 T 12-10-2018 TDE_0125 416e956ef6920966af406b408b3ce5b9 371 SUPERFAMILY SSF55073 214 363 1.49E-45 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0125 416e956ef6920966af406b408b3ce5b9 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 364 1.4E-51 T 12-10-2018 IPR000160 GGDEF domain TDE_0125 416e956ef6920966af406b408b3ce5b9 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 360 3.2E-45 T 12-10-2018 IPR000160 GGDEF domain TDE_0125 416e956ef6920966af406b408b3ce5b9 371 Gene3D G3DSA:3.30.70.270 203 369 2.7E-52 T 12-10-2018 TDE_2587 6fcc42dc9fe901d55a66be2f2bfd2d9c 339 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 99 289 2.2E-9 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TDE_2587 6fcc42dc9fe901d55a66be2f2bfd2d9c 339 Gene3D G3DSA:3.60.10.10 35 336 2.9E-29 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TDE_2587 6fcc42dc9fe901d55a66be2f2bfd2d9c 339 SUPERFAMILY SSF56219 38 333 3.93E-31 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TDE_2550 ab9f720b9cba43816079e59843176979 231 Pfam PF01863 Protein of unknown function DUF45 18 228 4.9E-56 T 12-10-2018 IPR002725 Protein of unknown function DUF45 TDE_2550 ab9f720b9cba43816079e59843176979 231 Gene3D G3DSA:3.30.2010.10 136 228 1.0E-14 T 12-10-2018 TDE_2616 89d18865f7184f83572d24babf149ab6 219 SUPERFAMILY SSF46785 129 205 8.16E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_2616 89d18865f7184f83572d24babf149ab6 219 Pfam PF13545 Crp-like helix-turn-helix domain 131 204 2.9E-6 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TDE_2616 89d18865f7184f83572d24babf149ab6 219 Gene3D G3DSA:1.10.10.10 130 212 3.3E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_2616 89d18865f7184f83572d24babf149ab6 219 Pfam PF00027 Cyclic nucleotide-binding domain 13 97 5.2E-21 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_2616 89d18865f7184f83572d24babf149ab6 219 Gene3D G3DSA:2.60.120.10 2 125 2.7E-31 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_2616 89d18865f7184f83572d24babf149ab6 219 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 61 78 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TDE_2616 89d18865f7184f83572d24babf149ab6 219 SUPERFAMILY SSF51206 12 120 2.23E-29 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_2616 89d18865f7184f83572d24babf149ab6 219 SMART SM00100 1 111 2.3E-14 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_0854 48fe8ef9a0efbadc32591e9917f22091 222 Pfam PF02631 RecX family 99 213 1.0E-23 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TDE_0854 48fe8ef9a0efbadc32591e9917f22091 222 Gene3D G3DSA:1.10.10.10 123 167 4.9E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0854 48fe8ef9a0efbadc32591e9917f22091 222 Hamap MF_01114 Regulatory protein RecX [recX]. 57 219 12.644 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TDE_0496 e3336009e6c5a8afba6170666b5c1fee 72 Pfam PF13560 Helix-turn-helix domain 4 56 4.2E-8 T 12-10-2018 TDE_0496 e3336009e6c5a8afba6170666b5c1fee 72 Gene3D G3DSA:1.10.260.40 1 70 3.1E-10 T 12-10-2018 TDE_0496 e3336009e6c5a8afba6170666b5c1fee 72 SUPERFAMILY SSF47413 2 58 1.1E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_2196 00635be99f61e3eebb5501bc7f4dda9c 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 225 1.2E-19 T 12-10-2018 TDE_2196 00635be99f61e3eebb5501bc7f4dda9c 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 5.8E-42 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_0019 7788dfabcbfb53b731cce69d117891a7 554 Gene3D G3DSA:3.10.410.10 442 531 3.7E-31 T 12-10-2018 TDE_0019 7788dfabcbfb53b731cce69d117891a7 554 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 554 43.909 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TDE_0019 7788dfabcbfb53b731cce69d117891a7 554 SUPERFAMILY SSF52540 4 547 6.49E-215 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0019 7788dfabcbfb53b731cce69d117891a7 554 Pfam PF01268 Formate--tetrahydrofolate ligase 2 553 7.3E-242 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TDE_0019 7788dfabcbfb53b731cce69d117891a7 554 Gene3D G3DSA:3.30.1510.10 128 245 3.4E-185 T 12-10-2018 TDE_0019 7788dfabcbfb53b731cce69d117891a7 554 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 102 112 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TDE_0019 7788dfabcbfb53b731cce69d117891a7 554 Gene3D G3DSA:3.40.50.300 6 429 3.4E-185 T 12-10-2018 TDE_1479 35c49445170947fa6882c5b77f8313fd 333 SUPERFAMILY SSF64182 25 328 5.89E-59 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily TDE_1479 35c49445170947fa6882c5b77f8313fd 333 Pfam PF01368 DHH family 28 169 4.4E-13 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TDE_1479 35c49445170947fa6882c5b77f8313fd 333 Gene3D G3DSA:3.90.1640.10 9 210 6.9E-48 T 12-10-2018 TDE_1479 35c49445170947fa6882c5b77f8313fd 333 Pfam PF02272 DHHA1 domain 196 328 1.8E-11 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TDE_1479 35c49445170947fa6882c5b77f8313fd 333 Gene3D G3DSA:3.10.310.30 215 333 1.9E-24 T 12-10-2018 TDE_0681 f6bddfc96d946af0309b7a505f6c1e4f 587 Gene3D G3DSA:3.30.1360.200 282 393 5.8E-27 T 12-10-2018 TDE_0681 f6bddfc96d946af0309b7a505f6c1e4f 587 Gene3D G3DSA:3.30.70.3400 145 242 8.6E-17 T 12-10-2018 TDE_0681 f6bddfc96d946af0309b7a505f6c1e4f 587 Pfam PF02355 Protein export membrane protein 403 567 1.0E-20 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TDE_0681 f6bddfc96d946af0309b7a505f6c1e4f 587 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 332 561 2.7E-78 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TDE_0681 f6bddfc96d946af0309b7a505f6c1e4f 587 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 145 567 1.4E-138 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TDE_0681 f6bddfc96d946af0309b7a505f6c1e4f 587 Gene3D G3DSA:1.20.1640.10 394 569 3.3E-16 T 12-10-2018 TDE_0681 f6bddfc96d946af0309b7a505f6c1e4f 587 SUPERFAMILY SSF82866 384 568 1.01E-38 T 12-10-2018 TDE_0681 f6bddfc96d946af0309b7a505f6c1e4f 587 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 582 36.807 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TDE_1252 4e20f4f576c56b7184902a91c300cf5e 204 SUPERFAMILY SSF48452 24 156 4.17E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1252 4e20f4f576c56b7184902a91c300cf5e 204 Gene3D G3DSA:1.25.40.10 21 203 5.1E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1252 4e20f4f576c56b7184902a91c300cf5e 204 Pfam PF00515 Tetratricopeptide repeat 103 134 2.2E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TDE_1252 4e20f4f576c56b7184902a91c300cf5e 204 SMART SM00028 102 135 6.5E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1252 4e20f4f576c56b7184902a91c300cf5e 204 SMART SM00028 26 59 41.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0037 48a85237fe66d58da5febfdb73f931cf 82 SMART SM00966 4 49 1.1E-9 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_0037 48a85237fe66d58da5febfdb73f931cf 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 39 3.3E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_0037 48a85237fe66d58da5febfdb73f931cf 82 SUPERFAMILY SSF89447 1 46 1.38E-11 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily TDE_0037 48a85237fe66d58da5febfdb73f931cf 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 41 3.8E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_0037 48a85237fe66d58da5febfdb73f931cf 82 Gene3D G3DSA:2.10.260.10 1 42 5.4E-13 T 12-10-2018 TDE_1575 c2bc732a026e640e3845d80935cfba33 290 Pfam PF04055 Radical SAM superfamily 66 225 1.8E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_1575 c2bc732a026e640e3845d80935cfba33 290 PIRSF PIRSF005963 2 290 3.7E-131 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TDE_1575 c2bc732a026e640e3845d80935cfba33 290 Gene3D G3DSA:3.20.20.70 55 265 6.9E-21 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_1575 c2bc732a026e640e3845d80935cfba33 290 SUPERFAMILY SSF102114 26 285 1.12E-59 T 12-10-2018 TDE_1575 c2bc732a026e640e3845d80935cfba33 290 TIGRFAM TIGR00510 lipA: lipoyl synthase 12 286 9.7E-110 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TDE_1575 c2bc732a026e640e3845d80935cfba33 290 SMART SM00729 60 262 4.9E-8 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_1575 c2bc732a026e640e3845d80935cfba33 290 Hamap MF_00206 Lipoyl synthase [lipA]. 1 290 125.694 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TDE_0137 f6bf5087fdc437433d01fd019bee757b 519 SUPERFAMILY SSF53067 253 502 5.83E-51 T 12-10-2018 TDE_0137 f6bf5087fdc437433d01fd019bee757b 519 Gene3D G3DSA:3.30.420.40 249 513 3.7E-62 T 12-10-2018 TDE_0137 f6bf5087fdc437433d01fd019bee757b 519 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 451 4.0E-25 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TDE_0137 f6bf5087fdc437433d01fd019bee757b 519 Gene3D G3DSA:3.30.420.40 1 248 4.2E-58 T 12-10-2018 TDE_0137 f6bf5087fdc437433d01fd019bee757b 519 SUPERFAMILY SSF53067 3 254 1.89E-52 T 12-10-2018 TDE_0137 f6bf5087fdc437433d01fd019bee757b 519 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 1.7E-41 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TDE_0137 f6bf5087fdc437433d01fd019bee757b 519 PIRSF PIRSF000538 1 507 6.5E-111 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TDE_0444 afb4607a0839d378333c179fe49e6f89 241 Gene3D G3DSA:3.40.50.880 1 241 2.1E-78 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_0444 afb4607a0839d378333c179fe49e6f89 241 SUPERFAMILY SSF52317 27 241 3.7E-41 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_0444 afb4607a0839d378333c179fe49e6f89 241 Pfam PF07722 Peptidase C26 4 221 7.7E-69 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 Pfam PF02743 Cache domain 47 282 4.1E-27 T 12-10-2018 IPR033479 Double Cache domain 1 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 SMART SM00304 319 373 2.4E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 SUPERFAMILY SSF58104 341 442 2.88E-9 T 12-10-2018 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 Gene3D G3DSA:1.10.287.950 403 705 7.0E-47 T 12-10-2018 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 Gene3D G3DSA:3.30.450.20 152 283 5.4E-20 T 12-10-2018 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 SUPERFAMILY SSF103190 66 195 1.44E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 SMART SM00283 416 663 5.1E-57 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 Pfam PF00672 HAMP domain 320 367 1.3E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 541 1.4E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 543 572 1.4E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 1.4E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 Gene3D G3DSA:1.20.1480.50 284 379 6.1E-9 T 12-10-2018 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 483 629 4.5E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0484 be9f4c53c32ad7e7eb1465d4e66f98fb 706 SUPERFAMILY SSF58104 428 657 2.49E-45 T 12-10-2018 TDE_2078 9d9085fb065e343ba71f9d61376d875a 242 SUPERFAMILY SSF48452 121 239 7.59E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2078 9d9085fb065e343ba71f9d61376d875a 242 Gene3D G3DSA:1.25.40.10 61 242 9.0E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2078 9d9085fb065e343ba71f9d61376d875a 242 Pfam PF13174 Tetratricopeptide repeat 192 222 5.8E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2078 9d9085fb065e343ba71f9d61376d875a 242 Pfam PF13424 Tetratricopeptide repeat 120 181 9.2E-9 T 12-10-2018 TDE_2078 9d9085fb065e343ba71f9d61376d875a 242 SMART SM00028 154 187 0.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2078 9d9085fb065e343ba71f9d61376d875a 242 SMART SM00028 190 223 0.0056 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2078 9d9085fb065e343ba71f9d61376d875a 242 SMART SM00028 117 150 0.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 PIRSF PIRSF000497 1 389 4.0E-173 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 266 274 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 240 377 1.3E-69 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 SUPERFAMILY SSF55973 117 239 1.08E-46 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 388 57.609 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 120 238 1.0E-42 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 122 132 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 8 388 4.7E-183 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 103 4.5E-40 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 SUPERFAMILY SSF55973 7 110 4.71E-43 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 SUPERFAMILY SSF55973 240 388 2.62E-70 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 Gene3D G3DSA:3.30.300.10 105 381 5.7E-172 T 12-10-2018 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 Gene3D G3DSA:3.30.300.10 8 241 5.7E-172 T 12-10-2018 TDE_2470 760e48c886705e1f1d661c8d09525e37 389 Gene3D G3DSA:3.30.300.10 13 278 5.7E-172 T 12-10-2018 TDE_1816 9e4dd2e267ceff767d8251816d35f039 398 Gene3D G3DSA:3.40.50.10140 1 145 3.7E-10 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TDE_1816 9e4dd2e267ceff767d8251816d35f039 398 SUPERFAMILY SSF52200 2 137 3.79E-6 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TDE_1816 9e4dd2e267ceff767d8251816d35f039 398 Pfam PF08357 SEFIR domain 1 121 7.5E-25 T 12-10-2018 IPR013568 SEFIR domain TDE_2189 3581ee2470cdf467ecf1b9b19c9770e0 316 Gene3D G3DSA:2.70.70.10 151 314 4.9E-39 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_2189 3581ee2470cdf467ecf1b9b19c9770e0 316 Pfam PF01551 Peptidase family M23 213 307 8.9E-28 T 12-10-2018 IPR016047 Peptidase M23 TDE_2189 3581ee2470cdf467ecf1b9b19c9770e0 316 SUPERFAMILY SSF51261 154 311 4.97E-43 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_0781 45923654e3835df018e7994bb420951f 132 Gene3D G3DSA:3.30.1370.30 4 78 4.3E-29 T 12-10-2018 TDE_0781 45923654e3835df018e7994bb420951f 132 SUPERFAMILY SSF56047 3 132 1.44E-44 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0781 45923654e3835df018e7994bb420951f 132 Gene3D G3DSA:3.30.1490.10 79 132 7.5E-24 T 12-10-2018 TDE_0781 45923654e3835df018e7994bb420951f 132 Pfam PF00410 Ribosomal protein S8 5 132 8.7E-50 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0781 45923654e3835df018e7994bb420951f 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.32 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0766 3976cd410d03cdbca0965091aebbac82 102 Gene3D G3DSA:3.30.70.600 3 102 3.0E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TDE_0766 3976cd410d03cdbca0965091aebbac82 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.5E-34 T 12-10-2018 IPR027486 Ribosomal protein S10 domain TDE_0766 3976cd410d03cdbca0965091aebbac82 102 SMART SM01403 7 101 1.5E-52 T 12-10-2018 IPR027486 Ribosomal protein S10 domain TDE_0766 3976cd410d03cdbca0965091aebbac82 102 SUPERFAMILY SSF54999 5 101 1.31E-35 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TDE_0766 3976cd410d03cdbca0965091aebbac82 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 24.949 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0766 3976cd410d03cdbca0965091aebbac82 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0766 3976cd410d03cdbca0965091aebbac82 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.5E-19 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0766 3976cd410d03cdbca0965091aebbac82 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.5E-19 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0766 3976cd410d03cdbca0965091aebbac82 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.5E-19 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0766 3976cd410d03cdbca0965091aebbac82 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.5E-44 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0800 bc004bc1c095dd232a10cc8e5e6384e8 144 Pfam PF00583 Acetyltransferase (GNAT) family 46 140 1.1E-15 T 12-10-2018 IPR000182 GNAT domain TDE_0800 bc004bc1c095dd232a10cc8e5e6384e8 144 Gene3D G3DSA:3.40.630.30 15 144 6.2E-24 T 12-10-2018 TDE_0800 bc004bc1c095dd232a10cc8e5e6384e8 144 SUPERFAMILY SSF55729 20 142 2.54E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_0855 74d1de3a190811f2cf9a66881ffa9f0c 189 Pfam PF12728 Helix-turn-helix domain 2 51 5.5E-8 T 12-10-2018 TDE_0855 74d1de3a190811f2cf9a66881ffa9f0c 189 Gene3D G3DSA:1.10.1660.10 3 56 3.3E-5 T 12-10-2018 TDE_0855 74d1de3a190811f2cf9a66881ffa9f0c 189 SUPERFAMILY SSF52172 70 188 5.83E-24 T 12-10-2018 IPR011006 CheY-like superfamily TDE_0855 74d1de3a190811f2cf9a66881ffa9f0c 189 SMART SM00448 69 184 1.3E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_0855 74d1de3a190811f2cf9a66881ffa9f0c 189 Gene3D G3DSA:3.40.50.2300 66 189 6.7E-23 T 12-10-2018 TDE_0855 74d1de3a190811f2cf9a66881ffa9f0c 189 Pfam PF00072 Response regulator receiver domain 71 184 4.5E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TDE_2345 0d3e0304609dc6efc95e67936162bb46 185 Gene3D G3DSA:1.10.132.20 12 182 5.0E-67 T 12-10-2018 TDE_2345 0d3e0304609dc6efc95e67936162bb46 185 Pfam PF01765 Ribosome recycling factor 20 183 1.1E-61 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 TDE_2345 0d3e0304609dc6efc95e67936162bb46 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 2.0E-68 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TDE_2345 0d3e0304609dc6efc95e67936162bb46 185 Gene3D G3DSA:3.30.1360.40 31 105 5.0E-67 T 12-10-2018 TDE_2345 0d3e0304609dc6efc95e67936162bb46 185 SUPERFAMILY SSF55194 3 184 1.7E-67 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 TDE_2345 0d3e0304609dc6efc95e67936162bb46 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.63 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TDE_0603 fe753e04715a791511946392e75de5f3 305 Gene3D G3DSA:3.90.550.10 1 304 8.3E-104 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_0603 fe753e04715a791511946392e75de5f3 305 SUPERFAMILY SSF53448 3 290 4.98E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_0603 fe753e04715a791511946392e75de5f3 305 Pfam PF00483 Nucleotidyl transferase 7 236 1.5E-6 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TDE_2398 ef020df522289aad3c115b95a221eda3 73 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 20 72 4.0E-25 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TDE_2398 ef020df522289aad3c115b95a221eda3 73 SMART SM01234 5 72 3.1E-40 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TDE_2398 ef020df522289aad3c115b95a221eda3 73 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 73 23.793 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TDE_2398 ef020df522289aad3c115b95a221eda3 73 Pfam PF01809 Haemolytic domain 8 72 8.3E-28 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TDE_2398 ef020df522289aad3c115b95a221eda3 73 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 10 73 7.4E-29 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TDE_2491 6cd38b69d255228f8073d52f11a6a5d9 264 Gene3D G3DSA:3.40.470.10 71 263 5.1E-71 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TDE_2491 6cd38b69d255228f8073d52f11a6a5d9 264 SMART SM00986 103 250 1.4E-38 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TDE_2491 6cd38b69d255228f8073d52f11a6a5d9 264 SMART SM00987 103 250 1.4E-38 T 12-10-2018 TDE_2491 6cd38b69d255228f8073d52f11a6a5d9 264 Pfam PF03167 Uracil DNA glycosylase superfamily 106 250 3.3E-45 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TDE_2491 6cd38b69d255228f8073d52f11a6a5d9 264 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 82 260 2.1E-62 T 12-10-2018 IPR005273 Uracil-DNA glycosylase family 4 TDE_2491 6cd38b69d255228f8073d52f11a6a5d9 264 SUPERFAMILY SSF52141 70 258 1.41E-58 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TDE_2050 631edb454458959c399fcf3201a932bc 77 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 8 66 1.1E-11 T 12-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system TDE_1044 496712912285a9ba6f04ccf0f65ea338 357 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 353 1.7E-72 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TDE_2248 d52ae000d35716834383fc0a0ad13cb6 240 SUPERFAMILY SSF69572 4 232 2.22E-51 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TDE_2248 d52ae000d35716834383fc0a0ad13cb6 240 Pfam PF00899 ThiF family 10 233 2.6E-40 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TDE_2248 d52ae000d35716834383fc0a0ad13cb6 240 Gene3D G3DSA:3.40.50.720 3 239 3.3E-61 T 12-10-2018 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 89 103 3.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 211 231 3.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 339 350 3.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 169 191 3.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 Gene3D G3DSA:3.40.50.10860 34 177 1.8E-64 T 12-10-2018 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 97 110 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 SMART SM00839 180 411 7.7E-94 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 SUPERFAMILY SSF51735 178 412 8.47E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 SUPERFAMILY SSF53223 3 180 2.75E-65 T 12-10-2018 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 Gene3D G3DSA:3.40.50.720 178 412 2.8E-90 T 12-10-2018 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 PIRSF PIRSF000185 1 413 4.1E-167 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 178 411 2.3E-77 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TDE_0997 084254f350e8ee0e8ebdf08dcc0108df 413 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 32 159 1.3E-56 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TDE_1690 b70e2197728eff03430f145e94d80b92 205 SUPERFAMILY SSF109604 28 166 2.98E-21 T 12-10-2018 TDE_1690 b70e2197728eff03430f145e94d80b92 205 Gene3D G3DSA:1.10.3210.10 23 182 7.2E-17 T 12-10-2018 TDE_1690 b70e2197728eff03430f145e94d80b92 205 SMART SM00471 41 148 0.0076 T 12-10-2018 IPR003607 HD/PDEase domain TDE_1420 053d729ea161e45d7c069a60aa35364a 399 SUPERFAMILY SSF52540 167 357 9.4E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1420 053d729ea161e45d7c069a60aa35364a 399 Gene3D G3DSA:3.40.50.300 163 370 2.0E-6 T 12-10-2018 TDE_0449 fbb4129addae99200beaca3fe17ab08b 160 Gene3D G3DSA:1.20.1260.10 1 160 4.8E-48 T 12-10-2018 IPR012347 Ferritin-like TDE_0449 fbb4129addae99200beaca3fe17ab08b 160 SUPERFAMILY SSF47240 1 159 4.92E-53 T 12-10-2018 IPR009078 Ferritin-like superfamily TDE_0449 fbb4129addae99200beaca3fe17ab08b 160 Pfam PF00210 Ferritin-like domain 7 141 2.2E-41 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TDE_1088 202aca0d93c6f74db9bb2ee03fecdbd8 226 SUPERFAMILY SSF52172 1 97 6.26E-5 T 12-10-2018 IPR011006 CheY-like superfamily TDE_1616 b49dfa0f684e4cf032c3731aa761df0c 322 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TDE_1616 b49dfa0f684e4cf032c3731aa761df0c 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 319 2.7E-29 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TDE_1616 b49dfa0f684e4cf032c3731aa761df0c 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 291 1.4E-60 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TDE_1616 b49dfa0f684e4cf032c3731aa761df0c 322 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TDE_1616 b49dfa0f684e4cf032c3731aa761df0c 322 SUPERFAMILY SSF52283 14 140 8.69E-31 T 12-10-2018 TDE_1616 b49dfa0f684e4cf032c3731aa761df0c 322 SUPERFAMILY SSF51735 102 292 2.87E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_1616 b49dfa0f684e4cf032c3731aa761df0c 322 Gene3D G3DSA:3.40.50.720 101 290 5.1E-119 T 12-10-2018 TDE_1616 b49dfa0f684e4cf032c3731aa761df0c 322 Gene3D G3DSA:3.40.50.720 19 319 5.1E-119 T 12-10-2018 TDE_1025 700bfcb007d0a45c6b889c0ca515e2f7 62 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 56 19.956 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1025 700bfcb007d0a45c6b889c0ca515e2f7 62 SUPERFAMILY SSF57829 1 56 1.04E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TDE_1025 700bfcb007d0a45c6b889c0ca515e2f7 62 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 57 1.3E-26 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1025 700bfcb007d0a45c6b889c0ca515e2f7 62 Pfam PF01783 Ribosomal L32p protein family 2 57 1.5E-24 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0335 25f09a606f67e5104411ed1945eb30ca 351 PIRSF PIRSF000355 4 351 1.5E-126 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0335 25f09a606f67e5104411ed1945eb30ca 351 Pfam PF00268 Ribonucleotide reductase, small chain 36 314 3.3E-85 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0335 25f09a606f67e5104411ed1945eb30ca 351 SUPERFAMILY SSF47240 22 348 1.28E-93 T 12-10-2018 IPR009078 Ferritin-like superfamily TDE_0335 25f09a606f67e5104411ed1945eb30ca 351 Gene3D G3DSA:1.10.620.20 11 324 1.7E-96 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 TDE_0335 25f09a606f67e5104411ed1945eb30ca 351 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 123 139 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_2576 dd0631720690c538ff782fd4d16f9695 244 Gene3D G3DSA:3.30.2350.10 6 244 1.6E-65 T 12-10-2018 TDE_2576 dd0631720690c538ff782fd4d16f9695 244 SUPERFAMILY SSF55120 7 241 1.42E-59 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2576 dd0631720690c538ff782fd4d16f9695 244 Pfam PF00849 RNA pseudouridylate synthase 14 166 3.5E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 SUPERFAMILY SSF88946 2 110 1.18E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 Gene3D G3DSA:1.10.10.10 193 272 5.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 SUPERFAMILY SSF88659 115 188 2.62E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 Pfam PF04542 Sigma-70 region 2 42 110 3.2E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 263 3.5E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 Pfam PF00140 Sigma-70 factor, region 1.2 8 35 3.8E-6 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 Gene3D G3DSA:1.10.601.10 3 110 7.7E-30 T 12-10-2018 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 PRINTS PR00046 Major sigma-70 factor signature 90 98 3.3E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 PRINTS PR00046 Major sigma-70 factor signature 236 251 3.3E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 PRINTS PR00046 Major sigma-70 factor signature 66 79 3.3E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 PRINTS PR00046 Major sigma-70 factor signature 214 226 3.3E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 PRINTS PR00046 Major sigma-70 factor signature 251 262 3.3E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 SUPERFAMILY SSF88659 174 266 8.97E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 Gene3D G3DSA:1.10.10.10 115 190 4.5E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0070 2c03ef4bf2e548178b3bfe2c4f60393d 275 Pfam PF04545 Sigma-70, region 4 210 264 1.2E-9 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TDE_1537 428ac34beb509affb2fccf56260b1a0f 350 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 231 243 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site TDE_1537 428ac34beb509affb2fccf56260b1a0f 350 SUPERFAMILY SSF48576 45 348 6.77E-65 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily TDE_1537 428ac34beb509affb2fccf56260b1a0f 350 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 102 116 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site TDE_1537 428ac34beb509affb2fccf56260b1a0f 350 Pfam PF00348 Polyprenyl synthetase 55 289 1.3E-53 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 TDE_1537 428ac34beb509affb2fccf56260b1a0f 350 Gene3D G3DSA:1.10.600.10 50 348 3.4E-73 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily TDE_2403 15e9f788b3b4d14d5ecf1c18e3b00168 213 Pfam PF00753 Metallo-beta-lactamase superfamily 21 197 8.2E-27 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_2403 15e9f788b3b4d14d5ecf1c18e3b00168 213 SMART SM00849 12 197 3.0E-34 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_2403 15e9f788b3b4d14d5ecf1c18e3b00168 213 SUPERFAMILY SSF56281 16 207 4.2E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_2403 15e9f788b3b4d14d5ecf1c18e3b00168 213 Gene3D G3DSA:3.60.15.10 1 212 9.5E-57 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_1953 e9041e83ec01e4198510c2a0f32519b9 213 SUPERFAMILY SSF46689 6 80 6.67E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_1953 e9041e83ec01e4198510c2a0f32519b9 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.0E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1953 e9041e83ec01e4198510c2a0f32519b9 213 Gene3D G3DSA:1.10.357.10 5 205 5.5E-20 T 12-10-2018 TDE_1953 e9041e83ec01e4198510c2a0f32519b9 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1953 e9041e83ec01e4198510c2a0f32519b9 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_2604 d36cc73dfe821dcaf5c06f2fc1b50330 516 Pfam PF03572 Peptidase family S41 260 491 2.5E-15 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TDE_2604 d36cc73dfe821dcaf5c06f2fc1b50330 516 Gene3D G3DSA:3.90.226.10 367 513 2.6E-13 T 12-10-2018 TDE_2604 d36cc73dfe821dcaf5c06f2fc1b50330 516 SUPERFAMILY SSF52096 56 512 3.98E-35 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_2604 d36cc73dfe821dcaf5c06f2fc1b50330 516 Gene3D G3DSA:3.90.226.10 249 347 5.9E-9 T 12-10-2018 TDE_1657 48c06143952119c85cde8a628585a5d3 136 Gene3D G3DSA:1.10.940.10 3 136 3.5E-39 T 12-10-2018 IPR035926 NusB-like superfamily TDE_1657 48c06143952119c85cde8a628585a5d3 136 SUPERFAMILY SSF48013 4 133 3.53E-37 T 12-10-2018 IPR035926 NusB-like superfamily TDE_1657 48c06143952119c85cde8a628585a5d3 136 Pfam PF01029 NusB family 8 133 1.8E-33 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TDE_1657 48c06143952119c85cde8a628585a5d3 136 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 3 136 19.616 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 TDE_1657 48c06143952119c85cde8a628585a5d3 136 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 135 7.5E-39 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 TDE_1523 48b49db23676da32ff536435679b1791 471 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 4 161 3.5E-39 T 12-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 TDE_1523 48b49db23676da32ff536435679b1791 471 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 176 421 3.4E-46 T 12-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 TDE_1523 48b49db23676da32ff536435679b1791 471 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 4 161 2.6E-48 T 12-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 TDE_1006 b00b5d9699cd9d303f678533b75c4f5d 270 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 247 1.2E-57 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 TDE_1006 b00b5d9699cd9d303f678533b75c4f5d 270 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 192 263 2.1E-20 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TDE_1006 b00b5d9699cd9d303f678533b75c4f5d 270 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TDE_1006 b00b5d9699cd9d303f678533b75c4f5d 270 SUPERFAMILY SSF117143 98 228 4.45E-23 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TDE_1006 b00b5d9699cd9d303f678533b75c4f5d 270 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 141 5.0E-40 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TDE_1006 b00b5d9699cd9d303f678533b75c4f5d 270 Pfam PF00460 Flagella basal body rod protein 6 35 9.0E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TDE_0887 e4e9a7e6614d43ad561b3fc297b1ca7f 139 Pfam PF01850 PIN domain 4 113 2.0E-6 T 12-10-2018 IPR002716 PIN domain TDE_0887 e4e9a7e6614d43ad561b3fc297b1ca7f 139 Gene3D G3DSA:3.40.50.1010 3 132 3.6E-6 T 12-10-2018 TDE_0887 e4e9a7e6614d43ad561b3fc297b1ca7f 139 SUPERFAMILY SSF88723 1 134 4.58E-15 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_0370 00463423d88b51e63444876f5ec0c0d4 476 Gene3D G3DSA:3.40.1190.10 104 316 1.7E-43 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_0370 00463423d88b51e63444876f5ec0c0d4 476 SUPERFAMILY SSF53244 334 473 2.87E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_0370 00463423d88b51e63444876f5ec0c0d4 476 Gene3D G3DSA:3.90.190.20 339 473 5.4E-33 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TDE_0370 00463423d88b51e63444876f5ec0c0d4 476 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 472 4.2E-125 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_0370 00463423d88b51e63444876f5ec0c0d4 476 Gene3D G3DSA:3.40.50.720 6 103 4.4E-21 T 12-10-2018 TDE_0370 00463423d88b51e63444876f5ec0c0d4 476 SUPERFAMILY SSF53623 106 303 1.83E-35 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TDE_0370 00463423d88b51e63444876f5ec0c0d4 476 SUPERFAMILY SSF51984 7 96 2.63E-12 T 12-10-2018 TDE_0370 00463423d88b51e63444876f5ec0c0d4 476 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 11 474 25.748 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_0370 00463423d88b51e63444876f5ec0c0d4 476 Pfam PF08245 Mur ligase middle domain 118 297 9.1E-25 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TDE_0607 55b5a4cf796a4f58e69bbf05d80ea360 251 SUPERFAMILY SSF52540 1 250 6.12E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0607 55b5a4cf796a4f58e69bbf05d80ea360 251 PIRSF PIRSF009320 89 250 5.2E-7 T 12-10-2018 TDE_0607 55b5a4cf796a4f58e69bbf05d80ea360 251 PIRSF PIRSF009320 2 100 3.0E-14 T 12-10-2018 TDE_0607 55b5a4cf796a4f58e69bbf05d80ea360 251 Gene3D G3DSA:3.40.50.300 1 250 2.5E-81 T 12-10-2018 TDE_0607 55b5a4cf796a4f58e69bbf05d80ea360 251 Pfam PF13614 AAA domain 3 176 1.2E-62 T 12-10-2018 IPR025669 AAA domain TDE_1609 7be779733ac0429c6fb412a2eba3f9f8 273 Pfam PF03537 Glycoside-hydrolase family GH114 45 260 6.5E-21 T 12-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain TDE_1609 7be779733ac0429c6fb412a2eba3f9f8 273 SUPERFAMILY SSF51445 53 267 2.93E-30 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_1609 7be779733ac0429c6fb412a2eba3f9f8 273 Gene3D G3DSA:3.20.20.70 19 271 4.6E-24 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0356 8162038a8042b4b62bee413cb210bb0f 118 Gene3D G3DSA:2.40.100.20 1 113 9.8E-12 T 12-10-2018 TDE_0356 8162038a8042b4b62bee413cb210bb0f 118 SUPERFAMILY SSF50891 1 112 1.14E-11 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily TDE_1985 b403c12369e2b53aae6121550440f9a9 924 Gene3D G3DSA:2.60.40.10 413 504 2.2E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_1985 b403c12369e2b53aae6121550440f9a9 924 Gene3D G3DSA:2.60.40.10 295 407 1.2E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_1302 356fd53b35cda58eef8b1a2ece240f5c 143 Gene3D G3DSA:1.20.120.50 3 138 1.1E-33 T 12-10-2018 IPR035938 Hemerythrin-like superfamily TDE_1302 356fd53b35cda58eef8b1a2ece240f5c 143 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 8 134 3.6E-36 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 TDE_1302 356fd53b35cda58eef8b1a2ece240f5c 143 Pfam PF01814 Hemerythrin HHE cation binding domain 17 129 3.3E-10 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TDE_1302 356fd53b35cda58eef8b1a2ece240f5c 143 SUPERFAMILY SSF47188 4 134 3.53E-31 T 12-10-2018 IPR035938 Hemerythrin-like superfamily TDE_1302 356fd53b35cda58eef8b1a2ece240f5c 143 ProSitePatterns PS00550 Hemerythrin family signature. 63 86 - T 12-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 TDE_1600 1ecccc3387bdf03796aa92c30f0329c1 583 SUPERFAMILY SSF90123 12 315 7.19E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1600 1ecccc3387bdf03796aa92c30f0329c1 583 SUPERFAMILY SSF52540 338 571 3.26E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1600 1ecccc3387bdf03796aa92c30f0329c1 583 Pfam PF00005 ABC transporter 353 502 2.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1600 1ecccc3387bdf03796aa92c30f0329c1 583 Gene3D G3DSA:1.20.1560.10 1 323 6.4E-44 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1600 1ecccc3387bdf03796aa92c30f0329c1 583 Gene3D G3DSA:3.40.50.300 335 578 5.5E-86 T 12-10-2018 TDE_1600 1ecccc3387bdf03796aa92c30f0329c1 583 Pfam PF00664 ABC transporter transmembrane region 26 287 7.0E-22 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_1600 1ecccc3387bdf03796aa92c30f0329c1 583 SMART SM00382 362 548 1.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1600 1ecccc3387bdf03796aa92c30f0329c1 583 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 246 272 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 PIRSF PIRSF000770 5 282 2.2E-37 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 Gene3D G3DSA:1.20.120.1810 10 44 7.0E-5 T 12-10-2018 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 Gene3D G3DSA:1.10.10.10 125 202 1.3E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0937 2ec91965c0973442dc3b230de79440ba 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 275 1.8E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 SUPERFAMILY SSF88659 186 284 6.92E-24 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_0937 2ec91965c0973442dc3b230de79440ba 286 Pfam PF04539 Sigma-70 region 3 132 208 2.4E-9 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 Pfam PF00140 Sigma-70 factor, region 1.2 15 46 8.7E-14 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 Gene3D G3DSA:1.10.10.10 203 286 7.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0937 2ec91965c0973442dc3b230de79440ba 286 Pfam PF04545 Sigma-70, region 4 221 274 1.1E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 SUPERFAMILY SSF88946 14 121 5.97E-44 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 76 89 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 SUPERFAMILY SSF88659 125 199 3.27E-7 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_0937 2ec91965c0973442dc3b230de79440ba 286 Pfam PF04542 Sigma-70 region 2 52 120 1.0E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 Gene3D G3DSA:1.10.601.10 45 124 2.1E-39 T 12-10-2018 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 PRINTS PR00046 Major sigma-70 factor signature 246 261 1.1E-23 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 PRINTS PR00046 Major sigma-70 factor signature 100 108 1.1E-23 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 PRINTS PR00046 Major sigma-70 factor signature 261 272 1.1E-23 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 PRINTS PR00046 Major sigma-70 factor signature 225 237 1.1E-23 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0937 2ec91965c0973442dc3b230de79440ba 286 PRINTS PR00046 Major sigma-70 factor signature 76 89 1.1E-23 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 Gene3D G3DSA:3.30.860.10 1 92 1.9E-37 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 PIRSF PIRSF002144 1 92 1.5E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 Pfam PF00203 Ribosomal protein S19 3 83 2.9E-35 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 SUPERFAMILY SSF54570 2 84 2.09E-34 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 2.3E-45 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.1E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.1E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.1E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0771 4608654451085f2fc5fe5e17e4c01d5a 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.089 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0303 68b3456f711b63b07679be75ec7eccfc 93 Gene3D G3DSA:3.30.2310.20 2 93 7.1E-29 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0303 68b3456f711b63b07679be75ec7eccfc 93 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 92 5.4E-28 T 12-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin TDE_0303 68b3456f711b63b07679be75ec7eccfc 93 SUPERFAMILY SSF143011 1 91 9.16E-23 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0303 68b3456f711b63b07679be75ec7eccfc 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 91 9.8E-26 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TDE_0303 68b3456f711b63b07679be75ec7eccfc 93 PIRSF PIRSF006156 2 93 2.0E-46 T 12-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin TDE_1871 e0dabb468c75e92aa3b54f97c5969ba5 286 Pfam PF02517 CAAX protease self-immunity 144 233 1.4E-21 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TDE_1739 71d51ee467358d679675fbe8dd7aaef8 354 Pfam PF02388 FemAB family 232 343 1.7E-18 T 12-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 TDE_1739 71d51ee467358d679675fbe8dd7aaef8 354 Pfam PF02388 FemAB family 20 229 1.8E-20 T 12-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 TDE_1739 71d51ee467358d679675fbe8dd7aaef8 354 Gene3D G3DSA:3.40.630.30 20 332 3.3E-66 T 12-10-2018 TDE_1739 71d51ee467358d679675fbe8dd7aaef8 354 SUPERFAMILY SSF55729 1 123 7.95E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_1739 71d51ee467358d679675fbe8dd7aaef8 354 SUPERFAMILY SSF55729 158 339 1.75E-40 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_1739 71d51ee467358d679675fbe8dd7aaef8 354 Gene3D G3DSA:3.40.630.30 151 320 3.3E-66 T 12-10-2018 TDE_0727 979baded11f13e7a9b15aac53cae1bc9 159 Gene3D G3DSA:1.10.150.120 75 159 1.9E-10 T 12-10-2018 TDE_0727 979baded11f13e7a9b15aac53cae1bc9 159 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 56 3.9E-7 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TDE_0727 979baded11f13e7a9b15aac53cae1bc9 159 Pfam PF01799 [2Fe-2S] binding domain 73 149 2.1E-11 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TDE_0727 979baded11f13e7a9b15aac53cae1bc9 159 SUPERFAMILY SSF47741 79 156 5.76E-15 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily TDE_0727 979baded11f13e7a9b15aac53cae1bc9 159 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TDE_0727 979baded11f13e7a9b15aac53cae1bc9 159 Gene3D G3DSA:3.10.20.30 1 74 2.1E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily TDE_0727 979baded11f13e7a9b15aac53cae1bc9 159 SUPERFAMILY SSF54292 1 76 2.62E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TDE_1121 3c5a2b9ef9b10d31ddb1bf1fb4c7b254 180 Pfam PF13581 Histidine kinase-like ATPase domain 41 107 2.4E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_1121 3c5a2b9ef9b10d31ddb1bf1fb4c7b254 180 Gene3D G3DSA:3.30.565.10 23 138 4.7E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_1121 3c5a2b9ef9b10d31ddb1bf1fb4c7b254 180 SUPERFAMILY SSF55874 46 108 3.27E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_2127 fc1acf01dacbfcbed39bccd5afee64a8 133 SUPERFAMILY SSF88723 1 132 4.77E-38 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_2127 fc1acf01dacbfcbed39bccd5afee64a8 133 Gene3D G3DSA:3.40.50.1010 1 131 8.0E-36 T 12-10-2018 TDE_2127 fc1acf01dacbfcbed39bccd5afee64a8 133 Pfam PF01850 PIN domain 2 123 2.1E-16 T 12-10-2018 IPR002716 PIN domain TDE_2065 3fcfa4bfb52f583f9ecbb2faf2ee40bf 87 Gene3D G3DSA:2.30.30.90 15 87 1.2E-12 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain TDE_2065 3fcfa4bfb52f583f9ecbb2faf2ee40bf 87 SUPERFAMILY SSF50037 17 86 9.61E-11 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal TDE_2065 3fcfa4bfb52f583f9ecbb2faf2ee40bf 87 Pfam PF04023 FeoA domain 14 86 2.3E-13 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 TDE_2065 3fcfa4bfb52f583f9ecbb2faf2ee40bf 87 SMART SM00899 14 87 5.8E-13 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 TDE_1522 5d6fef2d81e8a48f409e2c983ab439ee 342 Pfam PF08218 Citrate lyase ligase C-terminal domain 152 335 2.7E-63 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TDE_1522 5d6fef2d81e8a48f409e2c983ab439ee 342 PIRSF PIRSF005751 1 342 3.8E-118 T 12-10-2018 IPR005216 Citrate lyase ligase GO:0008771 TDE_1522 5d6fef2d81e8a48f409e2c983ab439ee 342 SMART SM00764 151 335 6.9E-117 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TDE_1522 5d6fef2d81e8a48f409e2c983ab439ee 342 Gene3D G3DSA:3.40.50.620 151 326 3.9E-17 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1522 5d6fef2d81e8a48f409e2c983ab439ee 342 SUPERFAMILY SSF55729 34 110 6.38E-6 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_1522 5d6fef2d81e8a48f409e2c983ab439ee 342 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 110 336 1.0E-129 T 12-10-2018 TDE_1522 5d6fef2d81e8a48f409e2c983ab439ee 342 SUPERFAMILY SSF52374 153 337 1.16E-20 T 12-10-2018 TDE_1522 5d6fef2d81e8a48f409e2c983ab439ee 342 Gene3D G3DSA:3.40.630.30 4 134 2.4E-5 T 12-10-2018 TDE_0381 34e1ff0928a97df0400084e295c6cea9 149 Pfam PF13248 zinc-ribbon domain 118 141 2.5E-8 T 12-10-2018 TDE_0462 019db7600fbf337e6b2421ce9a145c2f 269 SUPERFAMILY SSF56281 25 246 8.12E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_0462 019db7600fbf337e6b2421ce9a145c2f 269 Pfam PF00753 Metallo-beta-lactamase superfamily 41 193 3.7E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_0462 019db7600fbf337e6b2421ce9a145c2f 269 Gene3D G3DSA:3.60.15.10 22 252 8.9E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_0462 019db7600fbf337e6b2421ce9a145c2f 269 SMART SM00849 41 231 1.2E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_2162 60d09210c2b85fa3a25bc15391af4f84 263 Gene3D G3DSA:3.40.50.150 51 263 3.7E-52 T 12-10-2018 TDE_2162 60d09210c2b85fa3a25bc15391af4f84 263 Pfam PF01189 16S rRNA methyltransferase RsmB/F 65 252 1.4E-35 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 TDE_2162 60d09210c2b85fa3a25bc15391af4f84 263 SUPERFAMILY SSF53335 48 262 3.92E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2162 60d09210c2b85fa3a25bc15391af4f84 263 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 70 80 2.7E-14 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TDE_2162 60d09210c2b85fa3a25bc15391af4f84 263 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 191 207 2.7E-14 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TDE_2162 60d09210c2b85fa3a25bc15391af4f84 263 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 141 153 2.7E-14 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TDE_2083 11095144053357f37e3acc920e356d49 183 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 28 122 2.1E-16 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TDE_2083 11095144053357f37e3acc920e356d49 183 Pfam PF01740 STAS domain 27 126 3.8E-17 T 12-10-2018 IPR002645 STAS domain TDE_2083 11095144053357f37e3acc920e356d49 183 Gene3D G3DSA:3.30.750.24 24 138 4.1E-22 T 12-10-2018 IPR036513 STAS domain superfamily TDE_2083 11095144053357f37e3acc920e356d49 183 SUPERFAMILY SSF52091 28 128 2.35E-21 T 12-10-2018 IPR036513 STAS domain superfamily TDE_0188 21390053cb69af68cbec2cc668876f53 299 Pfam PF00962 Adenosine/AMP deaminase 147 278 2.2E-24 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 TDE_0188 21390053cb69af68cbec2cc668876f53 299 SUPERFAMILY SSF51556 11 283 1.13E-48 T 12-10-2018 IPR032466 Metal-dependent hydrolase TDE_0188 21390053cb69af68cbec2cc668876f53 299 Gene3D G3DSA:3.20.20.140 1 298 2.3E-44 T 12-10-2018 TDE_0563 e8294efd6fadcd0893d09a72390b381a 165 Gene3D G3DSA:3.40.1760.10 1 165 3.4E-55 T 12-10-2018 IPR035944 YfbM-like super family TDE_0563 e8294efd6fadcd0893d09a72390b381a 165 SUPERFAMILY SSF111069 3 165 1.44E-56 T 12-10-2018 IPR035944 YfbM-like super family TDE_0563 e8294efd6fadcd0893d09a72390b381a 165 Pfam PF08974 Domain of unknown function (DUF1877) 1 162 2.2E-47 T 12-10-2018 IPR015068 Protein of unknown function DUF1877 TDE_1913 b2eb42e44e57873e244ce6593e613bf5 335 SUPERFAMILY SSF53335 11 320 2.79E-57 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1913 b2eb42e44e57873e244ce6593e613bf5 335 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 64 290 7.2E-23 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 TDE_1913 b2eb42e44e57873e244ce6593e613bf5 335 Gene3D G3DSA:3.30.750.80 8 108 6.9E-24 T 12-10-2018 TDE_1913 b2eb42e44e57873e244ce6593e613bf5 335 Gene3D G3DSA:3.40.50.150 109 332 5.8E-70 T 12-10-2018 TDE_1061 da40690dea8a8cfc40a41f1982ecf179 594 SUPERFAMILY SSF52540 328 575 1.39E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1061 da40690dea8a8cfc40a41f1982ecf179 594 SMART SM00382 361 550 7.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1061 da40690dea8a8cfc40a41f1982ecf179 594 Pfam PF00005 ABC transporter 352 505 6.9E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1061 da40690dea8a8cfc40a41f1982ecf179 594 Gene3D G3DSA:1.20.1560.10 2 318 3.7E-14 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1061 da40690dea8a8cfc40a41f1982ecf179 594 SUPERFAMILY SSF90123 6 316 1.7E-19 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1061 da40690dea8a8cfc40a41f1982ecf179 594 Gene3D G3DSA:3.40.50.300 327 589 3.8E-71 T 12-10-2018 TDE_2263 6b9cb2ecf51574f0b9a7b38f69e8a458 304 Pfam PF07859 alpha/beta hydrolase fold 72 274 1.1E-45 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TDE_2263 6b9cb2ecf51574f0b9a7b38f69e8a458 304 Gene3D G3DSA:3.40.50.1820 6 299 5.9E-68 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2263 6b9cb2ecf51574f0b9a7b38f69e8a458 304 SUPERFAMILY SSF53474 24 294 1.34E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0674 11b3c395d85c875bd9489ba14871911a 278 SMART SM00506 82 222 2.5E-28 T 12-10-2018 IPR002589 Macro domain TDE_0674 11b3c395d85c875bd9489ba14871911a 278 SUPERFAMILY SSF52949 83 268 5.89E-52 T 12-10-2018 TDE_0674 11b3c395d85c875bd9489ba14871911a 278 Pfam PF01661 Macro domain 99 222 1.1E-35 T 12-10-2018 IPR002589 Macro domain TDE_0674 11b3c395d85c875bd9489ba14871911a 278 Gene3D G3DSA:3.40.220.10 52 270 2.9E-63 T 12-10-2018 TDE_0251 7c05c34a83e150ba090044a1e0619d85 459 PIRSF PIRSF001386 1 459 3.1E-225 T 12-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 TDE_0251 7c05c34a83e150ba090044a1e0619d85 459 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 248 266 - T 12-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 TDE_0251 7c05c34a83e150ba090044a1e0619d85 459 Gene3D G3DSA:3.40.640.10 59 319 9.8E-209 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_0251 7c05c34a83e150ba090044a1e0619d85 459 Gene3D G3DSA:3.90.1150.10 7 453 9.8E-209 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_0251 7c05c34a83e150ba090044a1e0619d85 459 Pfam PF01212 Beta-eliminating lyase 47 423 2.9E-93 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 TDE_0251 7c05c34a83e150ba090044a1e0619d85 459 SUPERFAMILY SSF53383 3 458 8.16E-141 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_0251 7c05c34a83e150ba090044a1e0619d85 459 Hamap MF_00544 Tryptophanase [tnaA]. 2 458 96.374 T 12-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 TDE_0846 be8a6644013b944f4a4639cfecf39fdc 720 Gene3D G3DSA:2.160.10.10 211 404 3.3E-6 T 12-10-2018 TDE_0846 be8a6644013b944f4a4639cfecf39fdc 720 Pfam PF16314 Domain of unknown function (DUF4954) 40 710 2.6E-136 T 12-10-2018 IPR032533 Protein of unknown function DUF4954 TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 Pfam PF08238 Sel1 repeat 179 213 4.5E-11 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 Pfam PF08238 Sel1 repeat 215 250 7.7E-8 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 Pfam PF08238 Sel1 repeat 143 178 1.9E-11 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 Pfam PF08238 Sel1 repeat 35 70 1.2E-8 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 Pfam PF08238 Sel1 repeat 108 142 9.9E-12 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 Pfam PF08238 Sel1 repeat 73 106 9.6E-10 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 SUPERFAMILY SSF81901 23 160 1.92E-37 T 12-10-2018 TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 SMART SM00671 71 106 2.6E-9 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 SMART SM00671 35 70 5.6E-9 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 SMART SM00671 179 214 1.4E-11 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 SMART SM00671 215 250 1.2E-8 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 SMART SM00671 107 142 1.0E-12 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 SMART SM00671 143 178 1.2E-11 T 12-10-2018 IPR006597 Sel1-like repeat TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 Gene3D G3DSA:1.25.40.10 11 255 5.0E-78 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1171 7ab38fda4aba7cc8c1ed6580e44b2fa7 267 SUPERFAMILY SSF81901 128 253 1.7E-35 T 12-10-2018 TDE_0130 47bd82079d992a268cc718119581fa1e 457 Gene3D G3DSA:1.10.3860.10 21 454 2.0E-96 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TDE_0130 47bd82079d992a268cc718119581fa1e 457 SUPERFAMILY SSF118215 31 439 1.7E-84 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TDE_0130 47bd82079d992a268cc718119581fa1e 457 Pfam PF00375 Sodium:dicarboxylate symporter family 31 439 9.6E-91 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 TDE_0130 47bd82079d992a268cc718119581fa1e 457 PRINTS PR00173 Glutamate-aspartate symporter signature 103 128 7.0E-17 T 12-10-2018 TDE_0130 47bd82079d992a268cc718119581fa1e 457 PRINTS PR00173 Glutamate-aspartate symporter signature 394 414 7.0E-17 T 12-10-2018 TDE_0130 47bd82079d992a268cc718119581fa1e 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 7.0E-17 T 12-10-2018 TDE_0130 47bd82079d992a268cc718119581fa1e 457 PRINTS PR00173 Glutamate-aspartate symporter signature 367 386 7.0E-17 T 12-10-2018 TDE_0130 47bd82079d992a268cc718119581fa1e 457 PRINTS PR00173 Glutamate-aspartate symporter signature 28 48 7.0E-17 T 12-10-2018 TDE_1515 bafbe2ab62f9a4b299149c745a1ff9cc 373 Pfam PF12704 MacB-like periplasmic core domain 18 189 1.6E-6 T 12-10-2018 IPR025857 MacB-like periplasmic core domain TDE_1515 bafbe2ab62f9a4b299149c745a1ff9cc 373 Pfam PF02687 FtsX-like permease family 277 356 7.4E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TDE_2630 f49df2a2b379d01f76a4350c5966c761 317 Gene3D G3DSA:1.10.3720.10 82 314 8.4E-20 T 12-10-2018 IPR035906 MetI-like superfamily TDE_2630 f49df2a2b379d01f76a4350c5966c761 317 SUPERFAMILY SSF161098 89 305 3.14E-15 T 12-10-2018 IPR035906 MetI-like superfamily TDE_2630 f49df2a2b379d01f76a4350c5966c761 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 311 4.7E-33 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_2264 1509640be1e6cc7235a03cecb86d121c 596 Pfam PF00664 ABC transporter transmembrane region 22 312 3.8E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2264 1509640be1e6cc7235a03cecb86d121c 596 SMART SM00382 384 570 1.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2264 1509640be1e6cc7235a03cecb86d121c 596 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2264 1509640be1e6cc7235a03cecb86d121c 596 Gene3D G3DSA:3.40.50.300 349 595 4.4E-91 T 12-10-2018 TDE_2264 1509640be1e6cc7235a03cecb86d121c 596 Gene3D G3DSA:1.20.1560.10 7 340 1.1E-67 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2264 1509640be1e6cc7235a03cecb86d121c 596 Pfam PF00005 ABC transporter 375 524 2.8E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2264 1509640be1e6cc7235a03cecb86d121c 596 SUPERFAMILY SSF52540 348 592 2.89E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2264 1509640be1e6cc7235a03cecb86d121c 596 SUPERFAMILY SSF90123 9 342 6.02E-67 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2066 067e142026741d8ec17d1c5e6550441d 78 Gene3D G3DSA:1.10.287.1040 1 70 5.6E-15 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 TDE_2066 067e142026741d8ec17d1c5e6550441d 78 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 3 59 7.1E-17 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TDE_2066 067e142026741d8ec17d1c5e6550441d 78 SUPERFAMILY SSF116842 3 60 7.32E-14 T 12-10-2018 TDE_2066 067e142026741d8ec17d1c5e6550441d 78 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 14 44 8.0E-10 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TDE_2066 067e142026741d8ec17d1c5e6550441d 78 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 3 66 12.144 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TDE_2066 067e142026741d8ec17d1c5e6550441d 78 PIRSF PIRSF006488 1 75 4.1E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TDE_2066 067e142026741d8ec17d1c5e6550441d 78 Pfam PF02609 Exonuclease VII small subunit 4 55 1.3E-14 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TDE_2556 a510db1b2e3ef63b37b3301f2e36cf55 281 Pfam PF12784 PD-(D/E)XK nuclease family transposase 8 223 2.9E-49 T 12-10-2018 TDE_2556 a510db1b2e3ef63b37b3301f2e36cf55 281 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 281 1.0E-19 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_1405 29ee227a487bb73b018b35c4fab5c703 270 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 7 241 1.1E-57 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TDE_1405 29ee227a487bb73b018b35c4fab5c703 270 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 3 267 32.966 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TDE_1405 29ee227a487bb73b018b35c4fab5c703 270 Gene3D G3DSA:3.40.50.880 1 269 2.3E-79 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_1405 29ee227a487bb73b018b35c4fab5c703 270 SMART SM01211 2 269 3.0E-103 T 12-10-2018 TDE_1405 29ee227a487bb73b018b35c4fab5c703 270 PIRSF PIRSF001586 1 270 3.8E-79 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 TDE_1405 29ee227a487bb73b018b35c4fab5c703 270 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 269 8.9E-70 T 12-10-2018 TDE_1405 29ee227a487bb73b018b35c4fab5c703 270 SUPERFAMILY SSF52317 1 241 6.25E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_1883 0d645d198c06779db8bd6eb4d2207c00 310 Pfam PF00892 EamA-like transporter family 160 293 1.2E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_1883 0d645d198c06779db8bd6eb4d2207c00 310 Pfam PF00892 EamA-like transporter family 17 146 3.0E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_1883 0d645d198c06779db8bd6eb4d2207c00 310 SUPERFAMILY SSF103481 196 293 3.01E-12 T 12-10-2018 TDE_1883 0d645d198c06779db8bd6eb4d2207c00 310 SUPERFAMILY SSF103481 49 149 1.7E-8 T 12-10-2018 TDE_2360 89a1a4373af9ff304c6c4eb41fccdb18 335 Pfam PF02733 Dak1 domain 18 327 4.1E-112 T 12-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 TDE_2360 89a1a4373af9ff304c6c4eb41fccdb18 335 SUPERFAMILY SSF82549 1 330 1.02E-111 T 12-10-2018 TDE_2360 89a1a4373af9ff304c6c4eb41fccdb18 335 Gene3D G3DSA:3.40.50.10440 12 184 7.1E-54 T 12-10-2018 TDE_2360 89a1a4373af9ff304c6c4eb41fccdb18 335 Gene3D G3DSA:3.30.1180.20 185 330 2.8E-47 T 12-10-2018 TDE_1658 df89a3840fac8abdc49e11ecf50b07b6 358 SUPERFAMILY SSF109998 26 210 3.92E-15 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily TDE_1658 df89a3840fac8abdc49e11ecf50b07b6 358 Gene3D G3DSA:1.10.4030.30 20 240 2.0E-10 T 12-10-2018 TDE_1544 70bba96b4bf0863fada1a47f0154eb94 370 Pfam PF13439 Glycosyltransferase Family 4 15 166 5.2E-14 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TDE_1544 70bba96b4bf0863fada1a47f0154eb94 370 Pfam PF00534 Glycosyl transferases group 1 186 344 7.3E-30 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 TDE_1544 70bba96b4bf0863fada1a47f0154eb94 370 Gene3D G3DSA:3.40.50.2000 179 369 2.2E-39 T 12-10-2018 TDE_1544 70bba96b4bf0863fada1a47f0154eb94 370 SUPERFAMILY SSF53756 13 369 5.34E-71 T 12-10-2018 TDE_1544 70bba96b4bf0863fada1a47f0154eb94 370 Gene3D G3DSA:3.40.50.2000 2 178 5.5E-14 T 12-10-2018 TDE_2152 8f0a9b07bc2e4d5235bb0fc442679d3a 99 SUPERFAMILY SSF102829 6 80 6.67E-6 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily TDE_2152 8f0a9b07bc2e4d5235bb0fc442679d3a 99 Pfam PF05164 Cell division protein ZapA 7 94 3.0E-6 T 12-10-2018 IPR007838 Cell division protein ZapA-like TDE_0053 deb05f4a3cb7aa95b1547fa5f2960c3c 264 Pfam PF01311 Bacterial export proteins, family 1 13 247 3.4E-52 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TDE_0053 deb05f4a3cb7aa95b1547fa5f2960c3c 264 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 1.8E-61 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 TDE_0053 deb05f4a3cb7aa95b1547fa5f2960c3c 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 1.2E-24 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TDE_0053 deb05f4a3cb7aa95b1547fa5f2960c3c 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 20 41 1.2E-24 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TDE_0053 deb05f4a3cb7aa95b1547fa5f2960c3c 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.2E-24 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TDE_0053 deb05f4a3cb7aa95b1547fa5f2960c3c 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 1.2E-24 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TDE_2423 0d4d467c9dc84870a537c1cf85e7546a 205 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 7 165 24.382 T 12-10-2018 IPR022973 Ribosomal protein L10 TDE_2423 0d4d467c9dc84870a537c1cf85e7546a 205 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 139 9.0E-7 T 12-10-2018 TDE_2423 0d4d467c9dc84870a537c1cf85e7546a 205 Pfam PF00466 Ribosomal protein L10 9 105 5.0E-23 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 TDE_2423 0d4d467c9dc84870a537c1cf85e7546a 205 SUPERFAMILY SSF160369 8 164 1.96E-46 T 12-10-2018 TDE_2423 0d4d467c9dc84870a537c1cf85e7546a 205 Gene3D G3DSA:3.30.70.1730 8 138 4.3E-37 T 12-10-2018 TDE_2726 f2340ca976698c6b7bd98dfb46f9f7e4 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 157 300 3.1E-27 T 12-10-2018 IPR000160 GGDEF domain TDE_2726 f2340ca976698c6b7bd98dfb46f9f7e4 322 SUPERFAMILY SSF55073 166 316 7.3E-30 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_2726 f2340ca976698c6b7bd98dfb46f9f7e4 322 SUPERFAMILY SSF51206 8 129 4.71E-23 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_2726 f2340ca976698c6b7bd98dfb46f9f7e4 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 163 298 1.5E-28 T 12-10-2018 IPR000160 GGDEF domain TDE_2726 f2340ca976698c6b7bd98dfb46f9f7e4 322 Gene3D G3DSA:3.30.70.270 154 319 2.8E-33 T 12-10-2018 TDE_2726 f2340ca976698c6b7bd98dfb46f9f7e4 322 Gene3D G3DSA:2.60.120.10 4 151 1.4E-26 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_2726 f2340ca976698c6b7bd98dfb46f9f7e4 322 Pfam PF00027 Cyclic nucleotide-binding domain 36 111 2.8E-18 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_2726 f2340ca976698c6b7bd98dfb46f9f7e4 322 SMART SM00267 150 317 1.2E-23 T 12-10-2018 IPR000160 GGDEF domain TDE_2726 f2340ca976698c6b7bd98dfb46f9f7e4 322 SMART SM00100 16 133 5.4E-8 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_1509 daaf4f6d9e2ab81c3b33c4a472d2c0dc 221 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1509 daaf4f6d9e2ab81c3b33c4a472d2c0dc 221 Pfam PF00005 ABC transporter 22 170 2.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1509 daaf4f6d9e2ab81c3b33c4a472d2c0dc 221 SMART SM00382 31 209 2.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1509 daaf4f6d9e2ab81c3b33c4a472d2c0dc 221 Gene3D G3DSA:3.40.50.300 1 221 7.3E-59 T 12-10-2018 TDE_1509 daaf4f6d9e2ab81c3b33c4a472d2c0dc 221 SUPERFAMILY SSF52540 2 219 1.07E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0197 208b9ec2569f188ed37a4d8204335b29 126 Pfam PF01850 PIN domain 2 115 2.1E-13 T 12-10-2018 IPR002716 PIN domain TDE_0197 208b9ec2569f188ed37a4d8204335b29 126 SUPERFAMILY SSF88723 1 115 8.69E-17 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_0197 208b9ec2569f188ed37a4d8204335b29 126 Gene3D G3DSA:3.40.50.1010 1 125 2.2E-20 T 12-10-2018 TDE_1179 f19833d39891c003cc8311e902222a77 325 Gene3D G3DSA:1.10.3470.10 2 324 7.2E-102 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_1179 f19833d39891c003cc8311e902222a77 325 SUPERFAMILY SSF81345 5 319 9.29E-84 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_1179 f19833d39891c003cc8311e902222a77 325 Pfam PF01032 FecCD transport family 13 319 2.3E-98 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 PRINTS PR01900 YidC translocation/secretion protein signature 510 525 7.9E-8 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 PRINTS PR01900 YidC translocation/secretion protein signature 365 381 7.9E-8 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 PRINTS PR01900 YidC translocation/secretion protein signature 533 557 7.9E-8 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 Gene3D G3DSA:2.70.98.90 75 339 2.5E-13 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 379 578 2.3E-60 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 Pfam PF02096 60Kd inner membrane protein 380 578 7.2E-56 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 PRINTS PR00701 60kDa inner membrane protein signature 85 106 5.6E-12 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 PRINTS PR00701 60kDa inner membrane protein signature 264 279 5.6E-12 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 PRINTS PR00701 60kDa inner membrane protein signature 441 464 5.6E-12 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 PRINTS PR00701 60kDa inner membrane protein signature 175 195 5.6E-12 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 3 580 16.186 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 377 4.6E-31 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal TDE_2396 95fb9db107e01c84b4c7abeee3909a34 582 Pfam PF14849 YidC periplasmic domain 80 339 1.3E-18 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain TDE_0144 823c3a6cb388b1415a32d43bd3eb771d 560 SUPERFAMILY SSF161098 326 556 5.76E-33 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0144 823c3a6cb388b1415a32d43bd3eb771d 560 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 297 1.6E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0144 823c3a6cb388b1415a32d43bd3eb771d 560 Gene3D G3DSA:1.10.3720.10 35 302 1.4E-47 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0144 823c3a6cb388b1415a32d43bd3eb771d 560 Gene3D G3DSA:1.10.3720.10 317 559 2.1E-27 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0144 823c3a6cb388b1415a32d43bd3eb771d 560 SUPERFAMILY SSF161098 29 292 5.42E-42 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0046 0bb5585b79879c8489b8d2fc3449a050 213 SUPERFAMILY SSF101262 3 212 3.14E-61 T 12-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 TDE_0046 0bb5585b79879c8489b8d2fc3449a050 213 Pfam PF04961 Formiminotransferase-cyclodeaminase 7 192 1.3E-66 T 12-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 TDE_0046 0bb5585b79879c8489b8d2fc3449a050 213 Gene3D G3DSA:1.20.120.680 7 213 3.6E-72 T 12-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 TDE_0677 6cf692648695f019a181909de413dc1e 197 SUPERFAMILY SSF64307 1 69 5.49E-13 T 12-10-2018 IPR036868 TusA-like domain superfamily TDE_0677 6cf692648695f019a181909de413dc1e 197 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 4 195 1.2E-67 T 12-10-2018 IPR019870 Selenium metabolism protein YedF TDE_0677 6cf692648695f019a181909de413dc1e 197 SUPERFAMILY SSF75169 98 190 9.81E-12 T 12-10-2018 IPR027396 DsrEFH-like TDE_0677 6cf692648695f019a181909de413dc1e 197 Pfam PF01206 Sulfurtransferase TusA 2 69 4.7E-14 T 12-10-2018 IPR001455 TusA-like domain TDE_0677 6cf692648695f019a181909de413dc1e 197 Gene3D G3DSA:3.30.110.40 1 96 5.0E-21 T 12-10-2018 IPR036868 TusA-like domain superfamily TDE_0171 846a3c1a7e0204458d4b37eef95aa489 1030 SUPERFAMILY SSF52540 11 1010 1.66E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0171 846a3c1a7e0204458d4b37eef95aa489 1030 SUPERFAMILY SSF52540 11 275 7.04E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0171 846a3c1a7e0204458d4b37eef95aa489 1030 Pfam PF13558 Putative exonuclease SbcCD, C subunit 930 990 1.4E-11 T 12-10-2018 TDE_0171 846a3c1a7e0204458d4b37eef95aa489 1030 Pfam PF13476 AAA domain 6 267 2.8E-19 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain TDE_0171 846a3c1a7e0204458d4b37eef95aa489 1030 Gene3D G3DSA:3.40.50.300 788 1030 3.9E-27 T 12-10-2018 TDE_0171 846a3c1a7e0204458d4b37eef95aa489 1030 Gene3D G3DSA:3.40.50.300 2 297 1.8E-37 T 12-10-2018 TDE_1906 9326084b9450ca82fcccfbf007b0e5ae 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 3.7E-44 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_1906 9326084b9450ca82fcccfbf007b0e5ae 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 224 1.6E-17 T 12-10-2018 TDE_2364 ffcc0d5d438e974006d891099725ed01 256 Pfam PF00005 ABC transporter 21 181 1.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2364 ffcc0d5d438e974006d891099725ed01 256 SUPERFAMILY SSF52540 4 252 2.31E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2364 ffcc0d5d438e974006d891099725ed01 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 252 6.8E-8 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TDE_2364 ffcc0d5d438e974006d891099725ed01 256 SMART SM00382 30 221 9.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2364 ffcc0d5d438e974006d891099725ed01 256 Gene3D G3DSA:3.40.50.300 1 253 7.9E-61 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 327 348 1.4E-60 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 139 1.4E-60 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 1.4E-60 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 1.4E-60 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 391 406 1.4E-60 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 1.4E-60 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 433 1.4E-60 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.4E-60 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 165 190 1.4E-60 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 SUPERFAMILY SSF51905 1 322 2.59E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 Gene3D G3DSA:3.50.50.60 139 255 1.0E-100 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PIRSF PIRSF000350 1 449 6.8E-74 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 Gene3D G3DSA:3.50.50.60 2 318 1.0E-100 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 312 1.5E-69 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.7E-35 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 145 3.7E-35 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 3.7E-35 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 3.7E-35 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 3.7E-35 T 12-10-2018 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 Gene3D G3DSA:3.30.390.30 330 449 3.5E-33 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 331 438 1.7E-25 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 1 449 3.0E-140 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 TDE_1629 c5b711c77f06c257f21074cdef7dd8f1 453 SUPERFAMILY SSF55424 329 449 3.09E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TDE_0864 0e751f3c940a2b760302e2285e30e2f8 617 Gene3D G3DSA:3.40.120.10 22 172 3.3E-20 T 12-10-2018 TDE_0864 0e751f3c940a2b760302e2285e30e2f8 617 SUPERFAMILY SSF53738 16 205 6.28E-22 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_0864 0e751f3c940a2b760302e2285e30e2f8 617 Gene3D G3DSA:3.40.120.10 231 443 1.3E-9 T 12-10-2018 TDE_0864 0e751f3c940a2b760302e2285e30e2f8 617 Gene3D G3DSA:3.40.120.10 335 430 1.3E-9 T 12-10-2018 TDE_0864 0e751f3c940a2b760302e2285e30e2f8 617 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 358 444 1.2E-6 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_0864 0e751f3c940a2b760302e2285e30e2f8 617 SUPERFAMILY SSF53738 356 445 3.06E-5 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_0864 0e751f3c940a2b760302e2285e30e2f8 617 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 49 160 5.5E-18 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1275 818cdb7658a0a4fd721d0f2eeb39cf14 317 SUPERFAMILY SSF161098 91 300 4.09E-19 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1275 818cdb7658a0a4fd721d0f2eeb39cf14 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 315 6.4E-46 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_1275 818cdb7658a0a4fd721d0f2eeb39cf14 317 Gene3D G3DSA:1.10.3720.10 85 307 3.1E-23 T 12-10-2018 IPR035906 MetI-like superfamily TDE_2612 4df3c132f21eeba1b76fa0f574127ed7 390 Gene3D G3DSA:3.30.1380.10 154 292 3.8E-16 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TDE_2612 4df3c132f21eeba1b76fa0f574127ed7 390 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 217 293 3.8E-17 T 12-10-2018 IPR039561 Peptidase M15C GO:0008233 TDE_2612 4df3c132f21eeba1b76fa0f574127ed7 390 SUPERFAMILY SSF55166 171 299 2.41E-18 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TDE_0634 c97584415f92d1eb923e4f2d21b52d89 314 SUPERFAMILY SSF160240 218 296 2.49E-17 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TDE_0634 c97584415f92d1eb923e4f2d21b52d89 314 Gene3D G3DSA:1.20.1510.10 9 213 3.2E-43 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TDE_0634 c97584415f92d1eb923e4f2d21b52d89 314 Gene3D G3DSA:3.30.70.1350 214 296 2.5E-25 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TDE_0634 c97584415f92d1eb923e4f2d21b52d89 314 Pfam PF16916 Dimerisation domain of Zinc Transporter 222 295 2.5E-20 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain TDE_0634 c97584415f92d1eb923e4f2d21b52d89 314 SUPERFAMILY SSF161111 7 214 6.15E-45 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TDE_0634 c97584415f92d1eb923e4f2d21b52d89 314 Pfam PF01545 Cation efflux family 15 213 7.5E-36 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TDE_0634 c97584415f92d1eb923e4f2d21b52d89 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 295 5.3E-58 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TDE_2697 eccf6cf86b23aed2caa4697a48154a61 257 Pfam PF02544 3-oxo-5-alpha-steroid 4-dehydrogenase 104 257 2.3E-36 T 12-10-2018 IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal GO:0005737|GO:0006629|GO:0016021|GO:0016627 TDE_2697 eccf6cf86b23aed2caa4697a48154a61 257 PIRSF PIRSF015596 1 257 9.2E-88 T 12-10-2018 IPR016636 3-oxo-5-alpha-steroid 4-dehydrogenase GO:0003865|GO:0008202|GO:0016020|GO:0055114 KEGG: 00140+1.3.1.22|KEGG: 00905+1.3.1.22|MetaCyc: PWY-6032|MetaCyc: PWY-7455|Reactome: R-HSA-193048 TDE_2738 713c29dd6a566703a46982e01aa7a9da 576 Gene3D G3DSA:1.10.1370.30 11 576 2.1E-208 T 12-10-2018 TDE_2738 713c29dd6a566703a46982e01aa7a9da 576 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 26 572 2.6E-211 T 12-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related TDE_2738 713c29dd6a566703a46982e01aa7a9da 576 Pfam PF01432 Peptidase family M3 178 558 3.1E-31 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 TDE_2738 713c29dd6a566703a46982e01aa7a9da 576 SUPERFAMILY SSF55486 46 570 1.71E-112 T 12-10-2018 TDE_2313 e385a4f70cb3550a6b5ced6a53d7043e 834 SUPERFAMILY SSF51126 535 738 3.53E-13 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_2313 e385a4f70cb3550a6b5ced6a53d7043e 834 SUPERFAMILY SSF51126 312 545 4.71E-15 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_2313 e385a4f70cb3550a6b5ced6a53d7043e 834 SMART SM00710 474 500 3500.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_2313 e385a4f70cb3550a6b5ced6a53d7043e 834 SMART SM00710 589 619 5100.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_2313 e385a4f70cb3550a6b5ced6a53d7043e 834 SMART SM00710 554 583 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_2313 e385a4f70cb3550a6b5ced6a53d7043e 834 SMART SM00710 416 441 450.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_2313 e385a4f70cb3550a6b5ced6a53d7043e 834 SMART SM00710 447 469 560.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_2313 e385a4f70cb3550a6b5ced6a53d7043e 834 SMART SM00710 706 732 350.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_2313 e385a4f70cb3550a6b5ced6a53d7043e 834 SMART SM00710 645 671 590.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_2269 8fdfaeea94eb5bbc78ae474b64e59fc6 329 Pfam PF03781 Sulfatase-modifying factor enzyme 1 84 326 2.2E-39 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_2269 8fdfaeea94eb5bbc78ae474b64e59fc6 329 SUPERFAMILY SSF56436 85 327 3.3E-53 T 12-10-2018 IPR016187 C-type lectin fold TDE_2269 8fdfaeea94eb5bbc78ae474b64e59fc6 329 Gene3D G3DSA:3.90.1580.10 52 329 2.7E-128 T 12-10-2018 TDE_2656 1def6ca36b209223ddaccf24830d73ba 251 SUPERFAMILY SSF53800 2 246 4.58E-67 T 12-10-2018 TDE_2656 1def6ca36b209223ddaccf24830d73ba 251 Gene3D G3DSA:3.40.50.1400 3 243 2.8E-84 T 12-10-2018 TDE_2656 1def6ca36b209223ddaccf24830d73ba 251 Pfam PF06180 Cobalt chelatase (CbiK) 3 246 8.3E-78 T 12-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 TDE_2656 1def6ca36b209223ddaccf24830d73ba 251 PIRSF PIRSF033579 1 250 1.8E-83 T 12-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 TDE_2656 1def6ca36b209223ddaccf24830d73ba 251 Gene3D G3DSA:3.40.50.1400 105 226 2.8E-84 T 12-10-2018 TDE_0007 6df626a68f81998b0b11bc2c7fb9eb7a 284 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 284 8.1E-45 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_0007 6df626a68f81998b0b11bc2c7fb9eb7a 284 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 239 1.4E-73 T 12-10-2018 TDE_1026 a245901b4106ba5f7d5ea216abab929c 78 Pfam PF00550 Phosphopantetheine attachment site 7 73 2.0E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain TDE_1026 a245901b4106ba5f7d5ea216abab929c 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 19.765 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TDE_1026 a245901b4106ba5f7d5ea216abab929c 78 SUPERFAMILY SSF47336 1 77 1.18E-21 T 12-10-2018 IPR036736 ACP-like superfamily TDE_1026 a245901b4106ba5f7d5ea216abab929c 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 5.9E-30 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TDE_1026 a245901b4106ba5f7d5ea216abab929c 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 76 2.0E-18 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TDE_1026 a245901b4106ba5f7d5ea216abab929c 78 Gene3D G3DSA:1.10.1200.10 1 78 1.9E-25 T 12-10-2018 IPR036736 ACP-like superfamily TDE_0299 5f78271141f31f578e0508c85954802f 139 Gene3D G3DSA:3.90.79.10 5 137 1.7E-34 T 12-10-2018 TDE_0299 5f78271141f31f578e0508c85954802f 139 Pfam PF00293 NUDIX domain 12 118 3.9E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TDE_0299 5f78271141f31f578e0508c85954802f 139 SUPERFAMILY SSF55811 4 134 7.58E-31 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TDE_0299 5f78271141f31f578e0508c85954802f 139 TIGRFAM TIGR00586 mutt: mutator mutT protein 7 135 4.7E-29 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 TDE_0299 5f78271141f31f578e0508c85954802f 139 PRINTS PR00502 NUDIX hydrolase family signature 55 70 5.5E-10 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TDE_0299 5f78271141f31f578e0508c85954802f 139 PRINTS PR00502 NUDIX hydrolase family signature 41 55 5.5E-10 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TDE_0299 5f78271141f31f578e0508c85954802f 139 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TDE_1449 019ad3b27672e88a8e80ed78af874362 315 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 44 302 5.8E-57 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TDE_1449 019ad3b27672e88a8e80ed78af874362 315 SUPERFAMILY SSF52540 81 301 2.38E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1449 019ad3b27672e88a8e80ed78af874362 315 SUPERFAMILY SSF50249 1 69 9.71E-8 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1449 019ad3b27672e88a8e80ed78af874362 315 Pfam PF03193 RsgA GTPase 66 245 1.1E-45 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 TDE_1449 019ad3b27672e88a8e80ed78af874362 315 Gene3D G3DSA:1.10.40.50 247 315 3.4E-17 T 12-10-2018 TDE_1449 019ad3b27672e88a8e80ed78af874362 315 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 1 312 29.421 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TDE_1449 019ad3b27672e88a8e80ed78af874362 315 Gene3D G3DSA:3.40.50.300 69 246 1.5E-44 T 12-10-2018 TDE_2591 746606ced35f01f5cc504927a2f4fa33 119 Pfam PF00581 Rhodanese-like domain 30 109 2.8E-13 T 12-10-2018 IPR001763 Rhodanese-like domain TDE_2591 746606ced35f01f5cc504927a2f4fa33 119 SMART SM00450 23 119 7.7E-15 T 12-10-2018 IPR001763 Rhodanese-like domain TDE_2591 746606ced35f01f5cc504927a2f4fa33 119 SUPERFAMILY SSF52821 7 106 2.23E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily TDE_2591 746606ced35f01f5cc504927a2f4fa33 119 Gene3D G3DSA:3.40.250.10 25 119 1.4E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily TDE_0824 99f23f5d206162378ca1442998fe1bee 216 Pfam PF00188 Cysteine-rich secretory protein family 94 209 7.5E-10 T 12-10-2018 IPR014044 CAP domain TDE_0824 99f23f5d206162378ca1442998fe1bee 216 SUPERFAMILY SSF55797 35 208 2.25E-9 T 12-10-2018 IPR035940 CAP superfamily TDE_2440 9448799ecc2a431046997ed62bc289c3 531 SUPERFAMILY SSF52540 325 517 4.02E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2440 9448799ecc2a431046997ed62bc289c3 531 Pfam PF00664 ABC transporter transmembrane region 3 259 4.5E-11 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2440 9448799ecc2a431046997ed62bc289c3 531 Gene3D G3DSA:3.40.50.300 305 531 4.5E-37 T 12-10-2018 TDE_2440 9448799ecc2a431046997ed62bc289c3 531 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2440 9448799ecc2a431046997ed62bc289c3 531 Pfam PF00005 ABC transporter 326 457 4.1E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2440 9448799ecc2a431046997ed62bc289c3 531 Gene3D G3DSA:1.20.1560.10 1 292 7.2E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2440 9448799ecc2a431046997ed62bc289c3 531 SMART SM00382 329 515 2.9E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2440 9448799ecc2a431046997ed62bc289c3 531 SUPERFAMILY SSF90123 2 288 1.31E-28 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2438 c82b15f62f75b0c93ed5329c67a6731b 430 SUPERFAMILY SSF81324 38 152 9.81E-26 T 12-10-2018 TDE_2438 c82b15f62f75b0c93ed5329c67a6731b 430 Pfam PF07885 Ion channel 48 123 3.8E-17 T 12-10-2018 IPR013099 Potassium channel domain TDE_2438 c82b15f62f75b0c93ed5329c67a6731b 430 SUPERFAMILY SSF51735 139 296 1.38E-10 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_2438 c82b15f62f75b0c93ed5329c67a6731b 430 Gene3D G3DSA:1.10.287.70 23 122 1.9E-22 T 12-10-2018 TDE_2438 c82b15f62f75b0c93ed5329c67a6731b 430 Pfam PF02254 TrkA-N domain 191 276 5.2E-5 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TDE_2438 c82b15f62f75b0c93ed5329c67a6731b 430 Gene3D G3DSA:3.40.50.720 123 275 1.7E-19 T 12-10-2018 TDE_1726 4a90998cfac2a48667b3ab58cf01e618 380 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 202 251 6.4E-13 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TDE_1726 4a90998cfac2a48667b3ab58cf01e618 380 Gene3D G3DSA:1.10.3090.10 164 374 3.9E-22 T 12-10-2018 TDE_1726 4a90998cfac2a48667b3ab58cf01e618 380 Pfam PF01743 Poly A polymerase head domain 50 165 2.8E-33 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TDE_1726 4a90998cfac2a48667b3ab58cf01e618 380 SUPERFAMILY SSF81891 164 259 1.7E-19 T 12-10-2018 TDE_1726 4a90998cfac2a48667b3ab58cf01e618 380 Gene3D G3DSA:3.30.460.10 16 161 7.1E-51 T 12-10-2018 TDE_1726 4a90998cfac2a48667b3ab58cf01e618 380 SUPERFAMILY SSF81301 36 162 3.05E-36 T 12-10-2018 TDE_1726 4a90998cfac2a48667b3ab58cf01e618 380 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 19 330 1.2E-102 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 TDE_1929 fcb2587bf629dd19c097b144deb8d060 285 Gene3D G3DSA:2.70.70.10 15 148 1.0E-6 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_0405 79c41ff72ea4b49fc66f7f05c70f4346 543 Pfam PF02707 Major Outer Sheath Protein N-terminal region 113 348 1.8E-16 T 12-10-2018 IPR003857 Major outer sheath protein, N-terminal TDE_0405 79c41ff72ea4b49fc66f7f05c70f4346 543 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 364 542 7.7E-20 T 12-10-2018 IPR003872 Major outer sheath protein, C-terminal TDE_0798 7ad3392ff384e01142e173de0fe2ab5e 442 Gene3D G3DSA:1.20.1250.20 243 440 6.8E-21 T 12-10-2018 TDE_0798 7ad3392ff384e01142e173de0fe2ab5e 442 Gene3D G3DSA:1.20.1250.20 7 210 3.1E-16 T 12-10-2018 TDE_0798 7ad3392ff384e01142e173de0fe2ab5e 442 Pfam PF13347 MFS/sugar transport protein 17 412 1.4E-16 T 12-10-2018 TDE_0798 7ad3392ff384e01142e173de0fe2ab5e 442 SUPERFAMILY SSF103473 1 434 1.83E-47 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_1582 2c9c09356f799d2e53bb8fbdac4584b2 491 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 482 2.2E-160 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TDE_1582 2c9c09356f799d2e53bb8fbdac4584b2 491 Gene3D G3DSA:3.40.50.2000 254 467 8.0E-170 T 12-10-2018 TDE_1582 2c9c09356f799d2e53bb8fbdac4584b2 491 Hamap MF_00484 Glycogen synthase [glgA]. 1 483 39.813 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TDE_1582 2c9c09356f799d2e53bb8fbdac4584b2 491 Gene3D G3DSA:3.40.50.2000 3 481 8.0E-170 T 12-10-2018 TDE_1582 2c9c09356f799d2e53bb8fbdac4584b2 491 Pfam PF08323 Starch synthase catalytic domain 2 240 5.8E-79 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TDE_1582 2c9c09356f799d2e53bb8fbdac4584b2 491 Pfam PF00534 Glycosyl transferases group 1 288 439 5.1E-10 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 TDE_1582 2c9c09356f799d2e53bb8fbdac4584b2 491 SUPERFAMILY SSF53756 2 485 2.36E-111 T 12-10-2018 TDE_0905 77db55bf362957b4d9742be5ed1b06be 238 Pfam PF02361 Cobalt transport protein 18 204 1.2E-8 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_0635 ecf3193401b4c2df2256eba93fa5411e 293 Pfam PF09992 Phosphodiester glycosidase 108 289 7.1E-27 T 12-10-2018 IPR018711 Phosphodiester glycosidase TDE_0336 158c8b31424a5835cb35f4e01cb5edb8 372 Pfam PF01594 AI-2E family transporter 19 352 1.0E-45 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like TDE_2344 147d0adb230a416625516dbcb7dc68e9 227 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 171 188 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 TDE_2344 147d0adb230a416625516dbcb7dc68e9 227 SUPERFAMILY SSF64005 6 220 4.32E-77 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TDE_2344 147d0adb230a416625516dbcb7dc68e9 227 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 4 226 37.445 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TDE_2344 147d0adb230a416625516dbcb7dc68e9 227 Gene3D G3DSA:3.40.1180.10 2 227 1.8E-87 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TDE_2344 147d0adb230a416625516dbcb7dc68e9 227 Pfam PF01255 Putative undecaprenyl diphosphate synthase 11 225 4.3E-75 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TDE_2344 147d0adb230a416625516dbcb7dc68e9 227 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 6 225 5.2E-77 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TDE_0869 582591f8b330366d3608c5333f84c802 370 Pfam PF07907 YibE/F-like protein 125 365 2.1E-77 T 12-10-2018 IPR012507 YibE/F-like TDE_2410 7f245300fc2462433c5d72c4208da4fd 404 SUPERFAMILY SSF53383 9 399 9.97E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_2410 7f245300fc2462433c5d72c4208da4fd 404 Gene3D G3DSA:3.90.1150.10 19 391 1.6E-135 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_2410 7f245300fc2462433c5d72c4208da4fd 404 Gene3D G3DSA:3.40.640.10 76 301 1.6E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_2410 7f245300fc2462433c5d72c4208da4fd 404 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 11 397 2.9E-125 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 TDE_2410 7f245300fc2462433c5d72c4208da4fd 404 Pfam PF00155 Aminotransferase class I and II 40 388 1.4E-32 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TDE_1221 9485ff164f686daeab352dbf5016dfc6 400 SUPERFAMILY SSF51445 20 376 1.58E-60 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_1221 9485ff164f686daeab352dbf5016dfc6 400 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 34 357 1.0E-47 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TDE_1221 9485ff164f686daeab352dbf5016dfc6 400 Gene3D G3DSA:3.20.20.300 19 383 2.4E-73 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TDE_1596 01590e19a627091cd4a30e8a3b3f223b 193 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 7 189 2.2E-55 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_1596 01590e19a627091cd4a30e8a3b3f223b 193 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 9 189 1.3E-41 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_2562 edf14cf635316cc9b6581cdd2df94523 269 Pfam PF00950 ABC 3 transport family 3 256 6.9E-60 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TDE_2562 edf14cf635316cc9b6581cdd2df94523 269 Gene3D G3DSA:1.10.3470.10 34 260 6.4E-6 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_2562 edf14cf635316cc9b6581cdd2df94523 269 SUPERFAMILY SSF81345 2 254 1.27E-32 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_1035 b205f9017bda38ed5bdc25565e5cf7b7 108 Pfam PF03551 Transcriptional regulator PadR-like family 16 89 1.2E-19 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal TDE_1035 b205f9017bda38ed5bdc25565e5cf7b7 108 SUPERFAMILY SSF46785 12 106 3.74E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_1035 b205f9017bda38ed5bdc25565e5cf7b7 108 Gene3D G3DSA:1.10.10.10 1 107 3.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0696 3d11291f0a168b946747500d41c7f51d 388 Pfam PF12698 ABC-2 family transporter protein 16 371 1.6E-31 T 12-10-2018 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 Hamap MF_00268 Protein RecA [recA]. 17 343 50.765 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 Pfam PF00154 recA bacterial DNA recombination protein 19 281 1.8E-139 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 16 338 9.3E-164 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 SUPERFAMILY SSF54752 284 339 6.93E-19 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 Gene3D G3DSA:3.40.50.300 42 281 1.1E-81 T 12-10-2018 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 Gene3D G3DSA:3.30.250.10 284 341 3.8E-23 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 SMART SM00382 70 241 3.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 PRINTS PR00142 RecA protein signature 106 135 4.0E-81 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 PRINTS PR00142 RecA protein signature 257 286 4.0E-81 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 PRINTS PR00142 RecA protein signature 140 169 4.0E-81 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 PRINTS PR00142 RecA protein signature 311 328 4.0E-81 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 PRINTS PR00142 RecA protein signature 223 251 4.0E-81 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 PRINTS PR00142 RecA protein signature 178 207 4.0E-81 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 ProSitePatterns PS00321 recA signature. 226 234 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 TDE_0872 88adce57207ea3f2178b7e21b88281f5 414 SUPERFAMILY SSF52540 17 281 2.7E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0598 349872be06c1395936e6a20936f5d36b 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 7.8E-90 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TDE_0598 349872be06c1395936e6a20936f5d36b 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 4.9E-4 T 12-10-2018 TDE_0598 349872be06c1395936e6a20936f5d36b 247 SUPERFAMILY SSF51735 4 245 1.22E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0598 349872be06c1395936e6a20936f5d36b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.5E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0598 349872be06c1395936e6a20936f5d36b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.5E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0598 349872be06c1395936e6a20936f5d36b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.5E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0598 349872be06c1395936e6a20936f5d36b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.5E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0598 349872be06c1395936e6a20936f5d36b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.5E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0598 349872be06c1395936e6a20936f5d36b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.5E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0598 349872be06c1395936e6a20936f5d36b 247 Gene3D G3DSA:3.40.50.720 1 246 4.5E-78 T 12-10-2018 TDE_0598 349872be06c1395936e6a20936f5d36b 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TDE_0598 349872be06c1395936e6a20936f5d36b 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.7E-63 T 12-10-2018 TDE_0598 349872be06c1395936e6a20936f5d36b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.4E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0598 349872be06c1395936e6a20936f5d36b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.4E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0598 349872be06c1395936e6a20936f5d36b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.4E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TDE_0726 4df61544310b40e2ec98729ca169d167 695 SMART SM01008 4 103 2.3E-4 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TDE_0726 4df61544310b40e2ec98729ca169d167 695 Gene3D G3DSA:3.30.365.10 2 691 2.2E-82 T 12-10-2018 TDE_0726 4df61544310b40e2ec98729ca169d167 695 SUPERFAMILY SSF54665 4 98 7.07E-16 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily TDE_0726 4df61544310b40e2ec98729ca169d167 695 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 4 86 4.4E-7 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TDE_0726 4df61544310b40e2ec98729ca169d167 695 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 129 612 1.4E-53 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TDE_0726 4df61544310b40e2ec98729ca169d167 695 SUPERFAMILY SSF56003 126 687 3.4E-104 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TDE_0432 d14e928271be4c7eb6072e14ef7820c5 157 Pfam PF00515 Tetratricopeptide repeat 99 128 4.8E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TDE_0432 d14e928271be4c7eb6072e14ef7820c5 157 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 10 85 5.7E-7 T 12-10-2018 TDE_0432 d14e928271be4c7eb6072e14ef7820c5 157 Gene3D G3DSA:1.25.40.10 1 64 4.7E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0432 d14e928271be4c7eb6072e14ef7820c5 157 Gene3D G3DSA:1.25.40.10 65 157 1.9E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0432 d14e928271be4c7eb6072e14ef7820c5 157 SUPERFAMILY SSF48452 2 129 6.26E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0432 d14e928271be4c7eb6072e14ef7820c5 157 SMART SM00028 99 132 1.5E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0432 d14e928271be4c7eb6072e14ef7820c5 157 SMART SM00028 1 29 19.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0432 d14e928271be4c7eb6072e14ef7820c5 157 SMART SM00028 65 98 3.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0432 d14e928271be4c7eb6072e14ef7820c5 157 SMART SM00028 30 63 0.29 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1466 1e98017cb7cf3a7e1c77db66f316ee96 391 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 376 1.3E-66 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 TDE_1466 1e98017cb7cf3a7e1c77db66f316ee96 391 Pfam PF06969 HemN C-terminal domain 310 374 1.5E-12 T 12-10-2018 IPR010723 HemN, C-terminal TDE_1466 1e98017cb7cf3a7e1c77db66f316ee96 391 SMART SM00729 4 218 4.3E-33 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_1466 1e98017cb7cf3a7e1c77db66f316ee96 391 Pfam PF04055 Radical SAM superfamily 9 172 6.1E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_1466 1e98017cb7cf3a7e1c77db66f316ee96 391 SUPERFAMILY SSF102114 4 384 6.8E-77 T 12-10-2018 TDE_1466 1e98017cb7cf3a7e1c77db66f316ee96 391 Gene3D G3DSA:3.80.30.20 2 309 6.8E-70 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TDE_0814 dc0f52a868817309b5a8c88f4aeaa0bf 56 Pfam PF01638 HxlR-like helix-turn-helix 21 55 1.3E-9 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type TDE_0814 dc0f52a868817309b5a8c88f4aeaa0bf 56 Gene3D G3DSA:1.10.10.10 6 56 7.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0814 dc0f52a868817309b5a8c88f4aeaa0bf 56 SUPERFAMILY SSF46785 21 55 3.22E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 Pfam PF00166 Chaperonin 10 Kd subunit 2 87 1.5E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 PRINTS PR00297 10kDa chaperonin signature 53 65 9.0E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 PRINTS PR00297 10kDa chaperonin signature 74 87 9.0E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 PRINTS PR00297 10kDa chaperonin signature 25 46 9.0E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 PRINTS PR00297 10kDa chaperonin signature 3 18 9.0E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 SUPERFAMILY SSF50129 1 88 4.13E-27 T 12-10-2018 IPR011032 GroES-like superfamily TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 SMART SM00883 2 87 5.2E-39 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 Hamap MF_00580 10 kDa chaperonin [groS]. 2 88 21.384 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TDE_0934 03eb375532a3b20a917ff4de72b5d69f 88 Gene3D G3DSA:2.30.33.40 1 88 1.3E-28 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 TDE_1432 de7b367922243519f957b01c4a0d297c 439 Gene3D G3DSA:3.40.50.300 140 359 2.3E-8 T 12-10-2018 TDE_1432 de7b367922243519f957b01c4a0d297c 439 SUPERFAMILY SSF52540 7 310 3.56E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1432 de7b367922243519f957b01c4a0d297c 439 Pfam PF13469 Sulfotransferase family 168 293 3.9E-6 T 12-10-2018 TDE_0488 f42e54b3bb941c2519be579169107d9d 201 Gene3D G3DSA:1.10.530.10 65 198 8.9E-8 T 12-10-2018 TDE_0488 f42e54b3bb941c2519be579169107d9d 201 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 73 197 5.2E-16 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TDE_2597 d2e9741d73ec3d3cd89eb5c2ba32ec3a 209 PIRSF PIRSF001461 1 208 2.1E-88 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TDE_2597 d2e9741d73ec3d3cd89eb5c2ba32ec3a 209 Gene3D G3DSA:3.20.20.70 1 208 4.0E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2597 d2e9741d73ec3d3cd89eb5c2ba32ec3a 209 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 205 7.0E-79 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TDE_2597 d2e9741d73ec3d3cd89eb5c2ba32ec3a 209 SUPERFAMILY SSF51366 5 205 5.42E-70 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TDE_2597 d2e9741d73ec3d3cd89eb5c2ba32ec3a 209 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 4.0E-76 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TDE_2597 d2e9741d73ec3d3cd89eb5c2ba32ec3a 209 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 541 41.446 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 SUPERFAMILY SSF54849 136 203 6.64E-19 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 SUPERFAMILY SSF48592 6 521 1.17E-74 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 Gene3D G3DSA:3.30.260.10 135 409 1.7E-229 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 6.6E-100 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 Gene3D G3DSA:1.10.560.10 7 521 1.7E-229 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 Gene3D G3DSA:3.50.7.10 191 371 1.7E-229 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 SUPERFAMILY SSF52029 183 375 2.54E-82 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 3.8E-262 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 PRINTS PR00298 60kDa chaperonin signature 397 418 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 PRINTS PR00298 60kDa chaperonin signature 26 52 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 PRINTS PR00298 60kDa chaperonin signature 349 374 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 PRINTS PR00298 60kDa chaperonin signature 267 290 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TDE_1175 199aa1bf71ab0f9f0f6b8f8d848768d3 544 PRINTS PR00298 60kDa chaperonin signature 82 109 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TDE_0885 29757a277417120106ef800da7fe5365 119 PRINTS PR00061 Ribosomal protein L19 signature 34 63 2.3E-38 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0885 29757a277417120106ef800da7fe5365 119 PRINTS PR00061 Ribosomal protein L19 signature 4 33 2.3E-38 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0885 29757a277417120106ef800da7fe5365 119 PRINTS PR00061 Ribosomal protein L19 signature 88 113 2.3E-38 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0885 29757a277417120106ef800da7fe5365 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0885 29757a277417120106ef800da7fe5365 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 112 2.4E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0885 29757a277417120106ef800da7fe5365 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 114 30.618 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0885 29757a277417120106ef800da7fe5365 119 Gene3D G3DSA:2.30.30.790 7 118 7.5E-16 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0885 29757a277417120106ef800da7fe5365 119 Pfam PF01245 Ribosomal protein L19 4 112 3.0E-47 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0885 29757a277417120106ef800da7fe5365 119 PIRSF PIRSF002191 1 119 4.0E-48 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0885 29757a277417120106ef800da7fe5365 119 SUPERFAMILY SSF50104 2 115 5.79E-45 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 SUPERFAMILY SSF52058 85 349 6.57E-48 T 12-10-2018 TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 Gene3D G3DSA:3.80.10.10 81 254 1.4E-51 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 SMART SM00369 145 168 75.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 SMART SM00369 103 126 68.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 SMART SM00369 187 210 54.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 SMART SM00369 229 252 39.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 SMART SM00369 271 291 410.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 SMART SM00369 292 315 17.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 Gene3D G3DSA:3.80.10.10 255 379 3.7E-20 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 Pfam PF12799 Leucine Rich repeats (2 copies) 104 141 3.3E-7 T 12-10-2018 IPR025875 Leucine rich repeat 4 TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 Pfam PF12799 Leucine Rich repeats (2 copies) 209 246 1.8E-6 T 12-10-2018 IPR025875 Leucine rich repeat 4 TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 Pfam PF12799 Leucine Rich repeats (2 copies) 146 183 3.8E-7 T 12-10-2018 IPR025875 Leucine rich repeat 4 TDE_2003 fdd007ddc01824579e3dd4bce099c06e 424 Pfam PF12799 Leucine Rich repeats (2 copies) 272 309 1.4E-7 T 12-10-2018 IPR025875 Leucine rich repeat 4 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 SUPERFAMILY SSF51998 316 844 3.36E-168 T 12-10-2018 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 703 725 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 530 541 1.3E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 714 741 1.3E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 653 676 1.3E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 392 411 1.3E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 587 610 1.3E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 625 647 1.3E-45 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 237 312 5.9E-18 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 Pfam PF03477 ATP cone domain 1 92 1.8E-19 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 SUPERFAMILY SSF48168 108 315 3.79E-54 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 Gene3D G3DSA:3.20.70.20 171 839 1.2E-197 T 12-10-2018 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 241 833 2.9E-185 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_0341 94add06f4e01bd32bba67aea6e718008 845 Pfam PF02867 Ribonucleotide reductase, barrel domain 317 829 4.3E-149 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TDE_1967 516e50301d665a89038dfaa7369beb33 298 Gene3D G3DSA:3.40.50.300 2 129 1.1E-7 T 12-10-2018 TDE_1967 516e50301d665a89038dfaa7369beb33 298 SUPERFAMILY SSF52540 8 175 2.36E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0720 ed2845e511966ce7ec9b75acd5ffd9d1 380 Gene3D G3DSA:2.40.30.170 50 364 1.5E-25 T 12-10-2018 TDE_0720 ed2845e511966ce7ec9b75acd5ffd9d1 380 Gene3D G3DSA:2.40.50.100 61 272 1.5E-25 T 12-10-2018 TDE_0720 ed2845e511966ce7ec9b75acd5ffd9d1 380 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 351 366 1.4E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_0720 ed2845e511966ce7ec9b75acd5ffd9d1 380 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 283 307 1.4E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_0720 ed2845e511966ce7ec9b75acd5ffd9d1 380 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 330 1.4E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_0720 ed2845e511966ce7ec9b75acd5ffd9d1 380 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 1.4E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TDE_0720 ed2845e511966ce7ec9b75acd5ffd9d1 380 Pfam PF13437 HlyD family secretion protein 237 354 2.7E-15 T 12-10-2018 TDE_0720 ed2845e511966ce7ec9b75acd5ffd9d1 380 Gene3D G3DSA:1.10.287.470 96 236 1.5E-25 T 12-10-2018 TDE_1416 f26ad39b6881223a3b11ed5898d88b06 283 Pfam PF01061 ABC-2 type transporter 33 243 2.2E-24 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TDE_1416 f26ad39b6881223a3b11ed5898d88b06 283 PRINTS PR00164 ABC-2 type transport system membrane protein signature 221 240 1.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TDE_1416 f26ad39b6881223a3b11ed5898d88b06 283 PRINTS PR00164 ABC-2 type transport system membrane protein signature 52 73 1.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TDE_1416 f26ad39b6881223a3b11ed5898d88b06 283 PRINTS PR00164 ABC-2 type transport system membrane protein signature 164 188 1.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TDE_1416 f26ad39b6881223a3b11ed5898d88b06 283 PRINTS PR00164 ABC-2 type transport system membrane protein signature 201 220 1.3E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TDE_2474 dd12679ca25984c942c4c36e8d2b22a1 164 SUPERFAMILY SSF55729 1 152 1.78E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2474 dd12679ca25984c942c4c36e8d2b22a1 164 Pfam PF13302 Acetyltransferase (GNAT) domain 3 138 1.6E-13 T 12-10-2018 IPR000182 GNAT domain TDE_2474 dd12679ca25984c942c4c36e8d2b22a1 164 Gene3D G3DSA:3.40.630.30 1 162 2.0E-21 T 12-10-2018 TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.1E-105 T 12-10-2018 IPR017861 Kae1/TsaD family TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 Pfam PF00814 Glycoprotease family 23 306 2.9E-92 T 12-10-2018 IPR000905 Gcp-like domain TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 Gene3D G3DSA:3.30.420.40 128 293 7.2E-116 T 12-10-2018 TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 Gene3D G3DSA:3.30.420.40 3 315 7.2E-116 T 12-10-2018 TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.8E-124 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 SUPERFAMILY SSF53067 1 308 2.73E-38 T 12-10-2018 TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 1.1E-43 T 12-10-2018 IPR017861 Kae1/TsaD family TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.1E-43 T 12-10-2018 IPR017861 Kae1/TsaD family TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 1.1E-43 T 12-10-2018 IPR017861 Kae1/TsaD family TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 1.1E-43 T 12-10-2018 IPR017861 Kae1/TsaD family TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.1E-43 T 12-10-2018 IPR017861 Kae1/TsaD family TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.1E-43 T 12-10-2018 IPR017861 Kae1/TsaD family TDE_2504 71da4a2a6ab2707ec460bc3b700eb4d0 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 58.485 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 SUPERFAMILY SSF52096 2 249 6.39E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 252 35.737 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 Pfam PF01039 Carboxyl transferase domain 34 209 4.4E-16 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 Gene3D G3DSA:3.90.226.10 1 251 7.6E-76 T 12-10-2018 TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2 251 8.7E-97 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 134 152 9.8E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 222 231 9.8E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 171 188 9.8E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 100 114 9.8E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_0590 014b3b3381cdc3a57bf7e9c7a02700d0 263 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 211 9.8E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 Gene3D G3DSA:1.10.530.10 96 249 2.6E-31 T 12-10-2018 TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 Pfam PF01464 Transglycosylase SLT domain 103 214 1.4E-27 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 Pfam PF01476 LysM domain 396 439 7.4E-14 T 12-10-2018 IPR018392 LysM domain TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 Pfam PF01476 LysM domain 330 373 3.4E-13 T 12-10-2018 IPR018392 LysM domain TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 SUPERFAMILY SSF53955 100 251 1.76E-35 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 SUPERFAMILY SSF54106 395 439 8.63E-11 T 12-10-2018 TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 SUPERFAMILY SSF54106 328 373 3.66E-10 T 12-10-2018 TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 SMART SM00257 395 439 1.0E-14 T 12-10-2018 IPR018392 LysM domain TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 SMART SM00257 329 373 2.0E-15 T 12-10-2018 IPR018392 LysM domain TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 Gene3D G3DSA:3.10.350.10 382 442 1.3E-15 T 12-10-2018 IPR036779 LysM domain superfamily TDE_2149 11b0d6a22b021b91d56057ae3ae43ea0 442 Gene3D G3DSA:3.10.350.10 328 373 2.6E-15 T 12-10-2018 IPR036779 LysM domain superfamily TDE_2571 124b7e844e3ff9153186a4870a0b0ed1 76 PIRSF PIRSF037246 1 76 7.3E-39 T 12-10-2018 IPR017154 Uncharacterised conserved protein UCP037246 TDE_2571 124b7e844e3ff9153186a4870a0b0ed1 76 Gene3D G3DSA:2.30.31.70 1 74 2.8E-30 T 12-10-2018 TDE_2571 124b7e844e3ff9153186a4870a0b0ed1 76 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 24 69 3.8E-9 T 12-10-2018 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0006355 TDE_0291 67b0472c7453235e327cc8dcc2f27b82 88 SUPERFAMILY SSF143120 4 77 6.67E-14 T 12-10-2018 IPR036165 YefM-like superfamily TDE_0291 67b0472c7453235e327cc8dcc2f27b82 88 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 48 1.4E-6 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TDE_1107 49a32037307d706f2ad46eb262b9964b 495 SUPERFAMILY SSF69705 1 121 4.19E-26 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 Pfam PF13248 zinc-ribbon domain 463 487 9.8E-9 T 12-10-2018 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 Gene3D G3DSA:3.30.1480.10 1 121 9.5E-24 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 Pfam PF08529 NusA N-terminal domain 5 120 5.9E-23 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 444 25.302 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 Gene3D G3DSA:3.30.300.20 281 460 3.0E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_1107 49a32037307d706f2ad46eb262b9964b 495 SUPERFAMILY SSF158702 384 433 4.97E-5 T 12-10-2018 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 Gene3D G3DSA:2.40.50.140 131 201 9.3E-12 T 12-10-2018 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 Gene3D G3DSA:3.30.300.20 202 280 7.9E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_1107 49a32037307d706f2ad46eb262b9964b 495 SUPERFAMILY SSF54814 204 281 3.73E-27 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 SUPERFAMILY SSF54814 282 346 2.35E-13 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 1.7E-110 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 TDE_1107 49a32037307d706f2ad46eb262b9964b 495 SUPERFAMILY SSF50249 128 202 6.86E-8 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1107 49a32037307d706f2ad46eb262b9964b 495 Pfam PF13184 NusA-like KH domain 233 301 9.1E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 TDE_0234 fd7092987bf6c91878effc6736256515 603 Gene3D G3DSA:3.40.50.300 329 601 4.2E-69 T 12-10-2018 TDE_0234 fd7092987bf6c91878effc6736256515 603 Pfam PF00005 ABC transporter 362 528 2.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0234 fd7092987bf6c91878effc6736256515 603 Gene3D G3DSA:1.20.1560.10 15 323 1.1E-9 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0234 fd7092987bf6c91878effc6736256515 603 SUPERFAMILY SSF90123 19 304 1.31E-17 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0234 fd7092987bf6c91878effc6736256515 603 SMART SM00382 371 574 1.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0234 fd7092987bf6c91878effc6736256515 603 SUPERFAMILY SSF52540 336 598 2.04E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0024 9750fe731b9125a94b168f3877769558 557 Gene3D G3DSA:3.40.50.1700 483 555 3.7E-6 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TDE_0024 9750fe731b9125a94b168f3877769558 557 Gene3D G3DSA:3.20.20.300 41 392 7.0E-96 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TDE_0024 9750fe731b9125a94b168f3877769558 557 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 58 379 1.1E-76 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TDE_0024 9750fe731b9125a94b168f3877769558 557 SUPERFAMILY SSF51445 37 397 2.63E-85 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_2199 9ca3b5cb44cae60132d2595ee7a405e8 224 SUPERFAMILY SSF53681 114 211 1.96E-11 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_2199 9ca3b5cb44cae60132d2595ee7a405e8 224 Gene3D G3DSA:3.40.50.1860 36 221 1.6E-21 T 12-10-2018 TDE_2199 9ca3b5cb44cae60132d2595ee7a405e8 224 Gene3D G3DSA:3.40.50.1860 86 198 1.6E-21 T 12-10-2018 TDE_2199 9ca3b5cb44cae60132d2595ee7a405e8 224 Pfam PF01177 Asp/Glu/Hydantoin racemase 40 203 2.0E-12 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_2199 9ca3b5cb44cae60132d2595ee7a405e8 224 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 173 183 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TDE_2061 d3883ec7b304579646fe20b9ec987218 337 Pfam PF10670 Domain of unknown function (DUF4198) 18 247 3.5E-34 T 12-10-2018 IPR019613 Protein of unknown function DUF4198 TDE_2647 9ee7ed105dc0583625b517b644b8e812 331 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 6 323 6.8E-94 T 12-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 TDE_2647 9ee7ed105dc0583625b517b644b8e812 331 Pfam PF03099 Biotin/lipoate A/B protein ligase family 47 153 5.1E-8 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TDE_2647 9ee7ed105dc0583625b517b644b8e812 331 SUPERFAMILY SSF55681 1 243 1.99E-71 T 12-10-2018 TDE_2647 9ee7ed105dc0583625b517b644b8e812 331 Gene3D G3DSA:3.30.930.10 1 243 2.1E-73 T 12-10-2018 TDE_2647 9ee7ed105dc0583625b517b644b8e812 331 Gene3D G3DSA:3.30.390.50 244 330 3.2E-28 T 12-10-2018 TDE_2647 9ee7ed105dc0583625b517b644b8e812 331 SUPERFAMILY SSF82649 245 330 4.92E-24 T 12-10-2018 TDE_2647 9ee7ed105dc0583625b517b644b8e812 331 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 245 328 2.7E-27 T 12-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 TDE_1124 6bb1d3f7a879bda09496a6265abd59a5 225 Gene3D G3DSA:3.60.21.10 16 218 1.9E-6 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like TDE_1124 6bb1d3f7a879bda09496a6265abd59a5 225 SUPERFAMILY SSF56300 2 215 5.06E-18 T 12-10-2018 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 SUPERFAMILY SSF55060 213 396 2.26E-47 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TDE_2212 8a4eefd6a758af83afde7592901c2708 399 PRINTS PR00473 Galactokinase signature 98 109 1.2E-19 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 PRINTS PR00473 Galactokinase signature 119 137 1.2E-19 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 PRINTS PR00473 Galactokinase signature 34 52 1.2E-19 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 PRINTS PR00473 Galactokinase signature 279 293 1.2E-19 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 TIGRFAM TIGR00131 gal_kin: galactokinase 10 396 2.5E-102 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 Pfam PF10509 Galactokinase galactose-binding signature 15 64 1.5E-16 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 Hamap MF_00246 Galactokinase [galK]. 32 396 40.96 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 PRINTS PR00959 Mevalonate kinase family signature 32 56 4.1E-39 T 12-10-2018 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 PRINTS PR00959 Mevalonate kinase family signature 343 360 4.1E-39 T 12-10-2018 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 PRINTS PR00959 Mevalonate kinase family signature 169 188 4.1E-39 T 12-10-2018 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 PRINTS PR00959 Mevalonate kinase family signature 126 148 4.1E-39 T 12-10-2018 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 Pfam PF08544 GHMP kinases C terminal 295 375 5.8E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain TDE_2212 8a4eefd6a758af83afde7592901c2708 399 SUPERFAMILY SSF54211 6 209 3.04E-55 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_2212 8a4eefd6a758af83afde7592901c2708 399 Pfam PF00288 GHMP kinases N terminal domain 122 188 1.3E-12 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TDE_2212 8a4eefd6a758af83afde7592901c2708 399 Gene3D G3DSA:3.30.230.10 29 208 2.4E-118 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_2212 8a4eefd6a758af83afde7592901c2708 399 Gene3D G3DSA:3.30.70.890 209 372 2.4E-118 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TDE_2212 8a4eefd6a758af83afde7592901c2708 399 PIRSF PIRSF000530 1 399 1.6E-127 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TDE_2786 51e81569dba54a5348d3f49d62aa9afc 1149 SMART SM00481 6 73 4.6E-35 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TDE_2786 51e81569dba54a5348d3f49d62aa9afc 1149 Pfam PF02811 PHP domain 7 180 4.1E-57 T 12-10-2018 IPR004013 PHP domain GO:0003824 TDE_2786 51e81569dba54a5348d3f49d62aa9afc 1149 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1024 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_2786 51e81569dba54a5348d3f49d62aa9afc 1149 SUPERFAMILY SSF89550 5 270 2.35E-39 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TDE_2786 51e81569dba54a5348d3f49d62aa9afc 1149 Gene3D G3DSA:1.10.150.870 770 878 3.0E-6 T 12-10-2018 TDE_2786 51e81569dba54a5348d3f49d62aa9afc 1149 Gene3D G3DSA:3.20.20.140 1 277 7.7E-114 T 12-10-2018 TDE_2786 51e81569dba54a5348d3f49d62aa9afc 1149 Gene3D G3DSA:1.10.10.1600 432 513 2.9E-19 T 12-10-2018 TDE_2786 51e81569dba54a5348d3f49d62aa9afc 1149 Pfam PF14579 Helix-hairpin-helix motif 803 892 8.4E-23 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_2786 51e81569dba54a5348d3f49d62aa9afc 1149 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 300 730 7.0E-170 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TDE_0799 f211818064d85f22011aa29a8caf3ad2 259 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 17 188 4.9E-28 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TDE_0799 f211818064d85f22011aa29a8caf3ad2 259 SUPERFAMILY SSF51695 11 256 2.88E-56 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TDE_0799 f211818064d85f22011aa29a8caf3ad2 259 Gene3D G3DSA:3.20.20.190 2 258 4.7E-62 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 Pfam PF00365 Phosphofructokinase 80 385 1.6E-59 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 PIRSF PIRSF000534 1 438 1.4E-191 T 12-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 169 185 2.0E-22 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 298 310 2.0E-22 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 257 2.0E-22 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 202 219 2.0E-22 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 81 100 2.0E-22 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 220 238 2.0E-22 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 Hamap MF_01981 ATP-dependent 6-phosphofructokinase [pfkA]. 4 437 52.683 T 12-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 Gene3D G3DSA:3.40.50.450 73 267 8.6E-57 T 12-10-2018 TDE_0064 920dbd486aad86d0b42a903ebc812f52 438 SUPERFAMILY SSF53784 33 435 2.88E-116 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TDE_0610 e11a0883dd1da6cdb60bfb1b1285ee39 309 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 270 3.7E-13 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TDE_0610 e11a0883dd1da6cdb60bfb1b1285ee39 309 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 187 5.3E-58 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 TDE_0610 e11a0883dd1da6cdb60bfb1b1285ee39 309 Gene3D G3DSA:1.10.1040.10 193 284 1.3E-19 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TDE_0610 e11a0883dd1da6cdb60bfb1b1285ee39 309 SUPERFAMILY SSF48179 190 271 4.08E-14 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TDE_0610 e11a0883dd1da6cdb60bfb1b1285ee39 309 SUPERFAMILY SSF51735 9 187 4.05E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0610 e11a0883dd1da6cdb60bfb1b1285ee39 309 Gene3D G3DSA:3.40.50.720 8 192 3.0E-53 T 12-10-2018 TDE_0610 e11a0883dd1da6cdb60bfb1b1285ee39 309 PIRSF PIRSF000105 4 299 5.9E-74 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 TDE_0944 5603e690f18ddfc25597cc774958ed62 236 Pfam PF14734 Domain of unknown function (DUF4469) with IG-like fold 129 226 4.7E-27 T 12-10-2018 IPR027824 Domain of unknown function DUF4469 with IG-like fold TDE_0944 5603e690f18ddfc25597cc774958ed62 236 Gene3D G3DSA:4.10.520.10 23 113 6.8E-38 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TDE_0944 5603e690f18ddfc25597cc774958ed62 236 Gene3D G3DSA:2.70.50.70 15 222 6.8E-38 T 12-10-2018 TDE_0944 5603e690f18ddfc25597cc774958ed62 236 Pfam PF14848 DNA-binding domain 2 121 1.3E-26 T 12-10-2018 TDE_1082 a34cf6fdcaba47c374ed26160053641a 345 SUPERFAMILY SSF55120 82 338 2.88E-58 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_1082 a34cf6fdcaba47c374ed26160053641a 345 Gene3D G3DSA:3.30.2350.10 78 332 1.6E-60 T 12-10-2018 TDE_1082 a34cf6fdcaba47c374ed26160053641a 345 Pfam PF00849 RNA pseudouridylate synthase 96 274 5.7E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_1082 a34cf6fdcaba47c374ed26160053641a 345 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 339 2.2E-66 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_1074 467370d0c928413e2fe5b51413cb3f29 464 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 277 462 6.7E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_1074 467370d0c928413e2fe5b51413cb3f29 464 Gene3D G3DSA:1.10.3720.10 250 462 9.8E-20 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1074 467370d0c928413e2fe5b51413cb3f29 464 SUPERFAMILY SSF161098 254 445 1.15E-23 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1409 262a99ccc3c194c1c880c8850d66e37c 246 Pfam PF04620 Flagellar filament outer layer protein Flaa 22 237 5.5E-71 T 12-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 TDE_1707 92fb135db1ee8e18e1830d92edb76562 138 Pfam PF04519 Polymer-forming cytoskeletal 13 110 6.4E-21 T 12-10-2018 IPR007607 Bactofilin A/B TDE_2175 906eca6a3e06411334e706b2b5063aaf 60 Pfam PF14202 Transposon-encoded protein TnpW 25 55 1.0E-11 T 12-10-2018 IPR026990 Transposon-encoded protein TnpW TDE_1677 1939542f0ef4a97d7eb7167e8419ec3e 168 Gene3D G3DSA:2.40.50.140 1 123 1.4E-39 T 12-10-2018 TDE_1677 1939542f0ef4a97d7eb7167e8419ec3e 168 Hamap MF_00984 Single-stranded DNA-binding protein. 4 109 31.612 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TDE_1677 1939542f0ef4a97d7eb7167e8419ec3e 168 Pfam PF00436 Single-strand binding protein family 4 104 5.4E-32 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TDE_1677 1939542f0ef4a97d7eb7167e8419ec3e 168 PIRSF PIRSF002070 1 159 2.0E-33 T 12-10-2018 TDE_1677 1939542f0ef4a97d7eb7167e8419ec3e 168 SUPERFAMILY SSF50249 4 168 2.09E-45 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_1677 1939542f0ef4a97d7eb7167e8419ec3e 168 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 168 6.4E-45 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TDE_2415 dd65ab3108ae11dcb3240f815f621e60 210 Pfam PF12952 Domain of unknown function (DUF3841) 16 193 1.1E-57 T 12-10-2018 IPR024211 Protein of unknown function DUF3841 TDE_2354 a2fc737c83cafff232eabdfbdbe617f2 147 Gene3D G3DSA:2.30.290.10 1 146 7.5E-49 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily TDE_2354 a2fc737c83cafff232eabdfbdbe617f2 147 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 140 25.63 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 TDE_2354 a2fc737c83cafff232eabdfbdbe617f2 147 SUPERFAMILY SSF141457 1 141 9.55E-45 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily TDE_2354 a2fc737c83cafff232eabdfbdbe617f2 147 Pfam PF02623 FliW protein 19 137 6.5E-39 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 TDE_0708 1a767d7a5b88c20743d8625a08575472 171 Gene3D G3DSA:3.40.109.10 1 171 4.1E-40 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TDE_0708 1a767d7a5b88c20743d8625a08575472 171 SUPERFAMILY SSF55469 1 167 7.98E-41 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TDE_0708 1a767d7a5b88c20743d8625a08575472 171 Pfam PF00881 Nitroreductase family 72 153 3.7E-10 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TDE_0708 1a767d7a5b88c20743d8625a08575472 171 Pfam PF00881 Nitroreductase family 9 67 3.8E-13 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TDE_1456 5cce233a640e5cdc202284ce1e01702f 475 Pfam PF00990 Diguanylate cyclase, GGDEF domain 316 454 8.4E-7 T 12-10-2018 IPR000160 GGDEF domain TDE_1456 5cce233a640e5cdc202284ce1e01702f 475 SUPERFAMILY SSF55073 318 459 5.34E-11 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_1456 5cce233a640e5cdc202284ce1e01702f 475 SMART SM00267 303 461 5.9E-5 T 12-10-2018 IPR000160 GGDEF domain TDE_1456 5cce233a640e5cdc202284ce1e01702f 475 Gene3D G3DSA:3.30.70.270 311 462 7.1E-11 T 12-10-2018 TDE_0293 d99d06f677f1169196440bc80575f45c 467 PIRSF PIRSF006603 12 467 2.9E-108 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0293 d99d06f677f1169196440bc80575f45c 467 Pfam PF01554 MatE 33 193 1.8E-29 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0293 d99d06f677f1169196440bc80575f45c 467 Pfam PF01554 MatE 264 425 5.4E-18 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0293 d99d06f677f1169196440bc80575f45c 467 TIGRFAM TIGR00797 matE: MATE efflux family protein 33 439 1.3E-71 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_2658 eaad48fd5213f15cdc157c7abe1e301a 429 SUPERFAMILY SSF52317 235 343 4.96E-11 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_2658 eaad48fd5213f15cdc157c7abe1e301a 429 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 185 3.9E-11 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TDE_2658 eaad48fd5213f15cdc157c7abe1e301a 429 SUPERFAMILY SSF52540 1 187 1.75E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2658 eaad48fd5213f15cdc157c7abe1e301a 429 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 238 411 2.3E-15 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TDE_2658 eaad48fd5213f15cdc157c7abe1e301a 429 Gene3D G3DSA:3.40.50.300 66 183 3.1E-8 T 12-10-2018 TDE_2658 eaad48fd5213f15cdc157c7abe1e301a 429 Gene3D G3DSA:3.40.50.300 1 58 1.9E-5 T 12-10-2018 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 Gene3D G3DSA:3.40.1160.10 1 309 2.4E-117 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 SUPERFAMILY SSF53633 3 308 3.93E-84 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 TIGRFAM TIGR00746 arcC: carbamate kinase 3 308 3.4E-115 T 12-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 2.2E-59 T 12-10-2018 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 2.2E-59 T 12-10-2018 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 2.2E-59 T 12-10-2018 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 2.2E-59 T 12-10-2018 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 2.2E-59 T 12-10-2018 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 2.2E-59 T 12-10-2018 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 2.2E-59 T 12-10-2018 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 Pfam PF00696 Amino acid kinase family 3 284 1.0E-35 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TDE_2476 bbea491ec5d618e5f4fdc47e75629656 309 PIRSF PIRSF000723 1 309 1.2E-119 T 12-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 TDE_0659 b7109e93748780ee055120dc133a2f2a 170 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 2.5E-60 T 12-10-2018 IPR012550 Protein of unknown function DUF1706 TDE_0659 b7109e93748780ee055120dc133a2f2a 170 SUPERFAMILY SSF109854 4 143 2.2E-9 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TDE_0659 b7109e93748780ee055120dc133a2f2a 170 Gene3D G3DSA:1.20.120.450 1 168 9.3E-61 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TDE_0659 b7109e93748780ee055120dc133a2f2a 170 PIRSF PIRSF031551 1 170 2.2E-66 T 12-10-2018 IPR012550 Protein of unknown function DUF1706 TDE_0755 ea2e1dcc190851252f5d1ecf3b380bf3 491 Pfam PF03553 Na+/H+ antiporter family 15 211 1.9E-13 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 TDE_0747 955fbe3b78f2adcbbe9df63ba68f4450 343 SUPERFAMILY SSF81345 5 333 3.14E-70 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_0747 955fbe3b78f2adcbbe9df63ba68f4450 343 Pfam PF01032 FecCD transport family 19 334 2.5E-79 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TDE_0747 955fbe3b78f2adcbbe9df63ba68f4450 343 Gene3D G3DSA:1.10.3470.10 1 338 4.0E-87 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_2596 89c6e2fe79eac1a78cbaa6a909200a9f 320 Gene3D G3DSA:1.25.40.10 109 316 1.4E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2596 89c6e2fe79eac1a78cbaa6a909200a9f 320 Pfam PF13525 Outer membrane lipoprotein 24 165 1.2E-5 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like TDE_2596 89c6e2fe79eac1a78cbaa6a909200a9f 320 Gene3D G3DSA:1.25.40.10 18 108 9.2E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2596 89c6e2fe79eac1a78cbaa6a909200a9f 320 SUPERFAMILY SSF48452 19 158 3.8E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1056 b53a15506b59a7afa85819844ab69dee 201 Pfam PF03781 Sulfatase-modifying factor enzyme 1 35 199 4.4E-34 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_1056 b53a15506b59a7afa85819844ab69dee 201 SUPERFAMILY SSF56436 32 199 2.59E-41 T 12-10-2018 IPR016187 C-type lectin fold TDE_1056 b53a15506b59a7afa85819844ab69dee 201 Gene3D G3DSA:3.90.1580.10 2 201 5.6E-58 T 12-10-2018 TDE_2081 680adbab7ed7cf1d39c2b93d2157bedc 306 Pfam PF10646 Sporulation and spore germination 171 285 2.2E-21 T 12-10-2018 IPR019606 GerMN domain TDE_2081 680adbab7ed7cf1d39c2b93d2157bedc 306 SMART SM00909 198 289 7.6E-26 T 12-10-2018 IPR019606 GerMN domain TDE_1363 657198e844a3f42c43a6879531035792 169 Gene3D G3DSA:3.40.109.10 93 168 1.8E-13 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TDE_1363 657198e844a3f42c43a6879531035792 169 Gene3D G3DSA:3.40.109.10 1 92 1.1E-19 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TDE_1363 657198e844a3f42c43a6879531035792 169 SUPERFAMILY SSF55469 1 167 4.71E-34 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TDE_1363 657198e844a3f42c43a6879531035792 169 Pfam PF00881 Nitroreductase family 1 146 3.2E-22 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TDE_1241 09e8e2599358a05ecabfb8d66b324ac0 767 Pfam PF07698 7TM receptor with intracellular HD hydrolase 313 503 3.7E-30 T 12-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain TDE_1241 09e8e2599358a05ecabfb8d66b324ac0 767 Pfam PF01966 HD domain 528 668 3.7E-19 T 12-10-2018 IPR006674 HD domain TDE_1241 09e8e2599358a05ecabfb8d66b324ac0 767 TIGRFAM TIGR00277 HDIG: HDIG domain 526 623 7.6E-28 T 12-10-2018 IPR006675 HDIG domain TDE_1241 09e8e2599358a05ecabfb8d66b324ac0 767 Gene3D G3DSA:1.10.3210.10 518 709 5.0E-20 T 12-10-2018 TDE_1241 09e8e2599358a05ecabfb8d66b324ac0 767 SMART SM00471 524 678 1.6E-8 T 12-10-2018 IPR003607 HD/PDEase domain TDE_1241 09e8e2599358a05ecabfb8d66b324ac0 767 SUPERFAMILY SSF109604 527 671 6.28E-16 T 12-10-2018 TDE_1241 09e8e2599358a05ecabfb8d66b324ac0 767 Pfam PF07697 7TM-HD extracellular 61 301 2.1E-33 T 12-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain TDE_1851 6d7a16c5be5152f6886428007329fe84 506 Pfam PF02687 FtsX-like permease family 399 500 5.5E-14 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TDE_1668 824fce4622a3e7946fa0a680373a295b 458 PIRSF PIRSF006060 1 453 1.2E-55 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TDE_1668 824fce4622a3e7946fa0a680373a295b 458 Pfam PF13520 Amino acid permease 10 413 2.8E-43 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TDE_1668 824fce4622a3e7946fa0a680373a295b 458 Gene3D G3DSA:1.20.1740.10 4 452 9.7E-60 T 12-10-2018 TDE_0988 8c6fd8ac552574f3d69d9301c96e595f 647 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 141 521 7.1E-44 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain TDE_0988 8c6fd8ac552574f3d69d9301c96e595f 647 Gene3D G3DSA:3.10.105.10 356 583 2.0E-40 T 12-10-2018 TDE_0988 8c6fd8ac552574f3d69d9301c96e595f 647 SUPERFAMILY SSF53850 92 618 3.44E-76 T 12-10-2018 TDE_0988 8c6fd8ac552574f3d69d9301c96e595f 647 PIRSF PIRSF002741 65 605 1.1E-55 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TDE_0988 8c6fd8ac552574f3d69d9301c96e595f 647 Gene3D G3DSA:3.40.190.10 77 350 1.5E-32 T 12-10-2018 TDE_0398 cc6e6d7c985808da7f6eadad9bebd52e 527 PIRSF PIRSF002741 1 525 2.3E-107 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TDE_0398 cc6e6d7c985808da7f6eadad9bebd52e 527 SUPERFAMILY SSF53850 38 522 1.38E-118 T 12-10-2018 TDE_0398 cc6e6d7c985808da7f6eadad9bebd52e 527 Gene3D G3DSA:3.10.105.10 289 492 4.3E-46 T 12-10-2018 TDE_0398 cc6e6d7c985808da7f6eadad9bebd52e 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 446 2.7E-80 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain TDE_0398 cc6e6d7c985808da7f6eadad9bebd52e 527 Gene3D G3DSA:3.40.190.10 24 288 6.9E-68 T 12-10-2018 TDE_1482 925fe9d45b9e6c1d2c786586c37459b7 585 Gene3D G3DSA:3.90.230.10 296 585 6.9E-93 T 12-10-2018 TDE_1482 925fe9d45b9e6c1d2c786586c37459b7 585 Pfam PF00557 Metallopeptidase family M24 307 517 4.8E-44 T 12-10-2018 IPR000994 Peptidase M24 TDE_1482 925fe9d45b9e6c1d2c786586c37459b7 585 SUPERFAMILY SSF53092 5 144 3.14E-16 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TDE_1482 925fe9d45b9e6c1d2c786586c37459b7 585 Pfam PF16189 Creatinase/Prolidase N-terminal domain 147 301 5.0E-43 T 12-10-2018 TDE_1482 925fe9d45b9e6c1d2c786586c37459b7 585 Gene3D G3DSA:3.40.350.10 146 295 1.3E-37 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TDE_1482 925fe9d45b9e6c1d2c786586c37459b7 585 Pfam PF16188 C-terminal region of peptidase_M24 525 585 2.6E-20 T 12-10-2018 IPR032416 Peptidase M24, C-terminal domain TDE_1482 925fe9d45b9e6c1d2c786586c37459b7 585 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 135 9.6E-23 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TDE_1482 925fe9d45b9e6c1d2c786586c37459b7 585 SUPERFAMILY SSF55920 298 550 6.54E-51 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like TDE_1482 925fe9d45b9e6c1d2c786586c37459b7 585 Gene3D G3DSA:3.40.350.10 1 145 1.8E-50 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TDE_0315 d3894405ccb73a10038637250fe3a0f0 594 SUPERFAMILY SSF52540 332 583 4.53E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0315 d3894405ccb73a10038637250fe3a0f0 594 SMART SM00382 367 559 9.7E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0315 d3894405ccb73a10038637250fe3a0f0 594 SUPERFAMILY SSF90123 12 306 6.67E-23 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0315 d3894405ccb73a10038637250fe3a0f0 594 Pfam PF00005 ABC transporter 358 513 3.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0315 d3894405ccb73a10038637250fe3a0f0 594 Gene3D G3DSA:3.40.50.300 337 592 1.7E-72 T 12-10-2018 TDE_0315 d3894405ccb73a10038637250fe3a0f0 594 Pfam PF00664 ABC transporter transmembrane region 142 288 8.4E-10 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0315 d3894405ccb73a10038637250fe3a0f0 594 Gene3D G3DSA:1.20.1560.10 6 327 1.5E-13 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1734 8c5e70336f83b0fd09f342a4fb5d296f 256 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 254 4.1E-96 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TDE_1734 8c5e70336f83b0fd09f342a4fb5d296f 256 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 192 207 - T 12-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 TDE_1734 8c5e70336f83b0fd09f342a4fb5d296f 256 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 5.1E-18 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TDE_1734 8c5e70336f83b0fd09f342a4fb5d296f 256 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 254 1.1E-90 T 12-10-2018 TDE_1734 8c5e70336f83b0fd09f342a4fb5d296f 256 SUPERFAMILY SSF56219 4 255 8.9E-75 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TDE_1734 8c5e70336f83b0fd09f342a4fb5d296f 256 Gene3D G3DSA:3.60.10.10 3 256 6.3E-87 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TDE_1734 8c5e70336f83b0fd09f342a4fb5d296f 256 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 TDE_1458 5b52092ee0f4b28f579f25c610b33f4e 509 Pfam PF01973 Protein of unknown function DUF115 165 318 1.9E-14 T 12-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TDE_2206 a7a1b8d5e62192a8d20e0ab9320b0964 147 SUPERFAMILY SSF52016 3 144 1.57E-23 T 12-10-2018 TDE_2206 a7a1b8d5e62192a8d20e0ab9320b0964 147 Pfam PF01989 Protein of unknown function DUF126 47 117 3.2E-12 T 12-10-2018 IPR002840 Aconitase X swivel domain, putative TDE_2206 a7a1b8d5e62192a8d20e0ab9320b0964 147 Gene3D G3DSA:3.50.30.10 1 147 8.6E-32 T 12-10-2018 TDE_2206 a7a1b8d5e62192a8d20e0ab9320b0964 147 PIRSF PIRSF004966 1 147 3.1E-48 T 12-10-2018 IPR012016 Aconitase X subunit 2, putative TDE_1472 6461349db941cff99fa5342f66a127fb 652 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 378 634 3.2E-49 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 TDE_1472 6461349db941cff99fa5342f66a127fb 652 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 14 105 3.6E-13 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 SUPERFAMILY SSF51261 91 295 2.2E-21 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 Pfam PF01476 LysM domain 26 69 5.4E-15 T 12-10-2018 IPR018392 LysM domain TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 Pfam PF01476 LysM domain 91 134 2.9E-13 T 12-10-2018 IPR018392 LysM domain TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 SUPERFAMILY SSF54106 24 70 1.07E-11 T 12-10-2018 TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 Pfam PF01551 Peptidase family M23 201 294 5.6E-18 T 12-10-2018 IPR016047 Peptidase M23 TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 Gene3D G3DSA:3.10.350.10 21 84 6.9E-18 T 12-10-2018 IPR036779 LysM domain superfamily TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 Gene3D G3DSA:2.70.70.10 165 297 7.6E-21 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 Gene3D G3DSA:3.10.350.10 85 148 8.8E-15 T 12-10-2018 IPR036779 LysM domain superfamily TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 SMART SM00257 25 69 6.3E-15 T 12-10-2018 IPR018392 LysM domain TDE_1297 0e0fef27bdc0c410c9753543c02a1899 301 SMART SM00257 90 134 8.5E-13 T 12-10-2018 IPR018392 LysM domain TDE_2511 f1611bd1ea573c383340feb9c5876331 555 SUPERFAMILY SSF52540 337 555 6.01E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2511 f1611bd1ea573c383340feb9c5876331 555 Pfam PF00664 ABC transporter transmembrane region 24 291 1.8E-20 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2511 f1611bd1ea573c383340feb9c5876331 555 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2511 f1611bd1ea573c383340feb9c5876331 555 SUPERFAMILY SSF90123 11 329 6.28E-49 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2511 f1611bd1ea573c383340feb9c5876331 555 Gene3D G3DSA:3.40.50.300 333 555 2.6E-86 T 12-10-2018 TDE_2511 f1611bd1ea573c383340feb9c5876331 555 Gene3D G3DSA:1.20.1560.10 9 321 1.4E-41 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2511 f1611bd1ea573c383340feb9c5876331 555 Pfam PF00005 ABC transporter 358 506 3.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2511 f1611bd1ea573c383340feb9c5876331 555 SMART SM00382 367 553 4.5E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2511 f1611bd1ea573c383340feb9c5876331 555 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 12 537 3.3E-99 T 12-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 TDE_0923 fd48069fabe6b9d06238c80edad72eb8 603 Gene3D G3DSA:3.40.50.300 376 599 4.1E-88 T 12-10-2018 TDE_0923 fd48069fabe6b9d06238c80edad72eb8 603 Pfam PF00005 ABC transporter 377 525 2.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0923 fd48069fabe6b9d06238c80edad72eb8 603 SUPERFAMILY SSF52540 369 595 3.66E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0923 fd48069fabe6b9d06238c80edad72eb8 603 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0923 fd48069fabe6b9d06238c80edad72eb8 603 Gene3D G3DSA:1.20.1560.10 3 318 3.8E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0923 fd48069fabe6b9d06238c80edad72eb8 603 SUPERFAMILY SSF90123 14 319 1.31E-41 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0923 fd48069fabe6b9d06238c80edad72eb8 603 Pfam PF00664 ABC transporter transmembrane region 25 284 6.1E-18 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0923 fd48069fabe6b9d06238c80edad72eb8 603 SMART SM00382 385 571 1.2E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1716 9296ac007c287e03dd2e0b73ec2a85bd 125 SUPERFAMILY SSF54593 1 119 3.49E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TDE_1716 9296ac007c287e03dd2e0b73ec2a85bd 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 117 1.4E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TDE_1716 9296ac007c287e03dd2e0b73ec2a85bd 125 Gene3D G3DSA:3.10.180.10 3 124 2.3E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TDE_1926 b5c061e709168d9eed0ca4f678b82756 362 Pfam PF07456 Heptaprenyl diphosphate synthase component I 24 166 5.0E-35 T 12-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I TDE_0054 077934dc0bc674b834e0e03174db7289 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 257 274 8.8E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TDE_0054 077934dc0bc674b834e0e03174db7289 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 316 8.8E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TDE_0054 077934dc0bc674b834e0e03174db7289 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 331 352 8.8E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TDE_0054 077934dc0bc674b834e0e03174db7289 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 237 255 8.8E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TDE_0054 077934dc0bc674b834e0e03174db7289 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 38 60 8.8E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TDE_0054 077934dc0bc674b834e0e03174db7289 390 Pfam PF01312 FlhB HrpN YscU SpaS Family 36 372 2.2E-112 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TDE_0054 077934dc0bc674b834e0e03174db7289 390 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 35 382 8.3E-116 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 TDE_0054 077934dc0bc674b834e0e03174db7289 390 Gene3D G3DSA:3.40.1690.10 247 388 1.2E-48 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TDE_0054 077934dc0bc674b834e0e03174db7289 390 SUPERFAMILY SSF160544 281 382 5.62E-35 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TDE_2267 7a44cf7f8eb5980d1b00a5a9fe0df093 160 SMART SM00341 73 153 1.1E-4 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TDE_2267 7a44cf7f8eb5980d1b00a5a9fe0df093 160 Gene3D G3DSA:1.10.150.80 68 151 3.3E-20 T 12-10-2018 TDE_2267 7a44cf7f8eb5980d1b00a5a9fe0df093 160 Pfam PF00570 HRDC domain 78 143 1.5E-18 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TDE_2267 7a44cf7f8eb5980d1b00a5a9fe0df093 160 SUPERFAMILY SSF47819 70 148 1.55E-19 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 SUPERFAMILY SSF56553 65 187 3.66E-24 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 273 329 3.0E-26 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 Gene3D G3DSA:2.170.120.12 57 187 2.1E-67 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 Gene3D G3DSA:1.10.150.20 236 350 2.7E-25 T 12-10-2018 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 SMART SM00662 27 244 7.1E-46 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 258 322 5.1E-22 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 SUPERFAMILY SSF47789 264 333 1.16E-19 T 12-10-2018 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 Gene3D G3DSA:3.30.1360.10 22 235 2.1E-67 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 SUPERFAMILY SSF55257 14 244 1.96E-29 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 77 169 3.7E-13 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 7 330 31.611 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 33 238 7.0E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_0791 932580a03638f3f8c611ba05a8c699ef 351 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 329 2.2E-99 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TDE_1511 82c9959a942fd4ed976e35acd7e3fb3d 208 PIRSF PIRSF017018 27 208 1.1E-61 T 12-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type TDE_1511 82c9959a942fd4ed976e35acd7e3fb3d 208 Gene3D G3DSA:2.60.40.2480 54 208 3.6E-61 T 12-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily TDE_1511 82c9959a942fd4ed976e35acd7e3fb3d 208 Pfam PF10634 Fe2+ transport protein 53 205 2.1E-57 T 12-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type TDE_1475 865d8475d8eccc2280591c408d2065c3 285 Gene3D G3DSA:1.20.58.1830 3 31 1.7E-54 T 12-10-2018 TDE_1475 865d8475d8eccc2280591c408d2065c3 285 Gene3D G3DSA:1.20.58.1830 250 284 1.7E-38 T 12-10-2018 TDE_1475 865d8475d8eccc2280591c408d2065c3 285 PRINTS PR00207 Flagellin signature 74 93 2.2E-23 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TDE_1475 865d8475d8eccc2280591c408d2065c3 285 PRINTS PR00207 Flagellin signature 109 132 2.2E-23 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TDE_1475 865d8475d8eccc2280591c408d2065c3 285 PRINTS PR00207 Flagellin signature 35 52 2.2E-23 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TDE_1475 865d8475d8eccc2280591c408d2065c3 285 Pfam PF00700 Bacterial flagellin C-terminal helical region 200 284 2.2E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TDE_1475 865d8475d8eccc2280591c408d2065c3 285 SUPERFAMILY SSF64518 1 285 1.7E-78 T 12-10-2018 TDE_1475 865d8475d8eccc2280591c408d2065c3 285 Gene3D G3DSA:1.20.1330.10 43 178 1.7E-54 T 12-10-2018 TDE_1475 865d8475d8eccc2280591c408d2065c3 285 Gene3D G3DSA:1.20.1330.10 193 244 1.7E-38 T 12-10-2018 TDE_1475 865d8475d8eccc2280591c408d2065c3 285 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 3.5E-35 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TDE_0498 470aaea4d80e76521e6bf907dea5b9e1 105 SUPERFAMILY SSF52540 1 102 1.06E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0498 470aaea4d80e76521e6bf907dea5b9e1 105 Gene3D G3DSA:3.40.50.300 1 102 2.0E-7 T 12-10-2018 TDE_0820 f463149db2b68b8ddcac89c9efe70c9c 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 5.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0820 f463149db2b68b8ddcac89c9efe70c9c 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 5.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_0820 f463149db2b68b8ddcac89c9efe70c9c 219 SUPERFAMILY SSF46689 13 80 2.82E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_0820 f463149db2b68b8ddcac89c9efe70c9c 219 Gene3D G3DSA:1.10.357.10 10 158 4.6E-20 T 12-10-2018 TDE_0820 f463149db2b68b8ddcac89c9efe70c9c 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.0E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_2146 b628877e4d8ac99a0abb407ebbc40eda 304 Pfam PF12146 Serine aminopeptidase, S33 24 288 3.6E-58 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 TDE_2146 b628877e4d8ac99a0abb407ebbc40eda 304 Gene3D G3DSA:3.40.50.1820 2 304 4.1E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2146 b628877e4d8ac99a0abb407ebbc40eda 304 SUPERFAMILY SSF53474 2 304 2.95E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_1298 5ebd03a3a3893ca982156dad3c633cb5 177 Pfam PF00027 Cyclic nucleotide-binding domain 39 123 6.5E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_1298 5ebd03a3a3893ca982156dad3c633cb5 177 SMART SM00100 20 137 2.7E-12 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_1298 5ebd03a3a3893ca982156dad3c633cb5 177 Gene3D G3DSA:2.60.120.10 1 158 3.9E-30 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_1298 5ebd03a3a3893ca982156dad3c633cb5 177 SUPERFAMILY SSF51206 4 134 2.49E-28 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_2671 8fb210ffff3318ab045c0bebf754dfc3 649 Pfam PF13598 Domain of unknown function (DUF4139) 200 480 3.6E-10 T 12-10-2018 IPR037291 Domain of unknown function DUF4139 TDE_1988 7c2edf83bbb1b0a81b6e8a29e7d92c37 923 SUPERFAMILY SSF82171 290 491 1.26E-6 T 12-10-2018 TDE_2107 b4d7247d7ca0fac846497920d2aa548b 371 Gene3D G3DSA:3.20.20.140 1 340 9.4E-76 T 12-10-2018 TDE_2107 b4d7247d7ca0fac846497920d2aa548b 371 SUPERFAMILY SSF51556 1 317 1.22E-73 T 12-10-2018 IPR032466 Metal-dependent hydrolase TDE_2107 b4d7247d7ca0fac846497920d2aa548b 371 ProSitePatterns PS00482 Dihydroorotase signature 1. 3 11 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TDE_1069 3e6ea86834873a6e60648f1786b55aa4 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 304 8.8E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_1069 3e6ea86834873a6e60648f1786b55aa4 338 SUPERFAMILY SSF161098 92 290 1.05E-22 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1069 3e6ea86834873a6e60648f1786b55aa4 338 Gene3D G3DSA:1.10.3720.10 87 301 4.6E-19 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1069 3e6ea86834873a6e60648f1786b55aa4 338 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 73 2.2E-7 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TDE_0884 aafbf31e857ced82aa10b826a64a55fe 243 Gene3D G3DSA:1.10.1270.20 168 243 7.2E-29 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TDE_0884 aafbf31e857ced82aa10b826a64a55fe 243 SUPERFAMILY SSF75217 1 240 5.3E-91 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases TDE_0884 aafbf31e857ced82aa10b826a64a55fe 243 PIRSF PIRSF000386 1 243 2.8E-94 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TDE_0884 aafbf31e857ced82aa10b826a64a55fe 243 Gene3D G3DSA:3.40.1280.10 1 167 4.4E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TDE_0884 aafbf31e857ced82aa10b826a64a55fe 243 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 217 1.0E-65 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TDE_0884 aafbf31e857ced82aa10b826a64a55fe 243 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 243 98.584 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TDE_0884 aafbf31e857ced82aa10b826a64a55fe 243 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 224 4.7E-94 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TDE_0107 9034fd57cf242a1e99abbcac72eee7bc 541 Gene3D G3DSA:3.90.400.10 103 175 3.4E-173 T 12-10-2018 TDE_0107 9034fd57cf242a1e99abbcac72eee7bc 541 Pfam PF00128 Alpha amylase, catalytic domain 26 369 4.2E-99 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TDE_0107 9034fd57cf242a1e99abbcac72eee7bc 541 Gene3D G3DSA:2.60.40.1180 473 541 4.9E-8 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta TDE_0107 9034fd57cf242a1e99abbcac72eee7bc 541 Gene3D G3DSA:3.20.20.80 3 463 3.4E-173 T 12-10-2018 TDE_0107 9034fd57cf242a1e99abbcac72eee7bc 541 SUPERFAMILY SSF51011 472 540 2.88E-8 T 12-10-2018 TDE_0107 9034fd57cf242a1e99abbcac72eee7bc 541 SUPERFAMILY SSF51445 2 469 1.84E-136 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_0107 9034fd57cf242a1e99abbcac72eee7bc 541 SMART SM00642 11 407 3.1E-121 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TDE_2361 509fe1c680b5d369580ad428f075e462 385 Gene3D G3DSA:3.40.50.2300 43 357 1.6E-79 T 12-10-2018 TDE_2361 509fe1c680b5d369580ad428f075e462 385 Pfam PF13458 Periplasmic binding protein 37 361 2.6E-54 T 12-10-2018 IPR028081 Leucine-binding protein domain TDE_2361 509fe1c680b5d369580ad428f075e462 385 SUPERFAMILY SSF53822 36 384 6.06E-78 T 12-10-2018 IPR028082 Periplasmic binding protein-like I TDE_2361 509fe1c680b5d369580ad428f075e462 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 38 54 1.9E-5 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TDE_2361 509fe1c680b5d369580ad428f075e462 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 81 99 1.9E-5 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TDE_2361 509fe1c680b5d369580ad428f075e462 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 269 287 1.9E-5 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TDE_2361 509fe1c680b5d369580ad428f075e462 385 Gene3D G3DSA:3.40.50.2300 158 287 1.6E-79 T 12-10-2018 TDE_0457 62052d0d1b1e7805438fc7046c2f7d1b 174 Gene3D G3DSA:3.40.1000.10 17 168 3.3E-6 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich TDE_0457 62052d0d1b1e7805438fc7046c2f7d1b 174 SUPERFAMILY SSF55724 22 154 1.2E-6 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich TDE_0457 62052d0d1b1e7805438fc7046c2f7d1b 174 Pfam PF01789 PsbP 22 167 1.4E-6 T 12-10-2018 IPR002683 PsbP family GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898 TDE_2782 6817e23e03532fe021522d8a97643e99 596 Gene3D G3DSA:3.40.50.300 342 595 1.5E-80 T 12-10-2018 TDE_2782 6817e23e03532fe021522d8a97643e99 596 SUPERFAMILY SSF52540 346 589 6.21E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2782 6817e23e03532fe021522d8a97643e99 596 Pfam PF00005 ABC transporter 370 517 1.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2782 6817e23e03532fe021522d8a97643e99 596 SMART SM00382 379 565 1.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2782 6817e23e03532fe021522d8a97643e99 596 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2782 6817e23e03532fe021522d8a97643e99 596 SUPERFAMILY SSF90123 5 341 1.83E-70 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2782 6817e23e03532fe021522d8a97643e99 596 Pfam PF00664 ABC transporter transmembrane region 19 308 1.3E-47 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2782 6817e23e03532fe021522d8a97643e99 596 Gene3D G3DSA:1.20.1560.10 4 335 1.4E-79 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2218 b212cc217b956482401063c306cdfb83 300 SUPERFAMILY SSF54637 10 175 4.02E-24 T 12-10-2018 IPR029069 HotDog domain superfamily TDE_2218 b212cc217b956482401063c306cdfb83 300 Pfam PF01643 Acyl-ACP thioesterase 145 287 1.3E-17 T 12-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 TDE_2218 b212cc217b956482401063c306cdfb83 300 Pfam PF01643 Acyl-ACP thioesterase 13 113 6.3E-13 T 12-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 TDE_2218 b212cc217b956482401063c306cdfb83 300 SUPERFAMILY SSF54637 189 287 4.06E-15 T 12-10-2018 IPR029069 HotDog domain superfamily TDE_0191 f91ff1e07c3a3ae0fcb5ba1449928000 142 SUPERFAMILY SSF55729 1 140 1.08E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_0191 f91ff1e07c3a3ae0fcb5ba1449928000 142 Gene3D G3DSA:3.40.630.30 1 140 1.4E-31 T 12-10-2018 TDE_0191 f91ff1e07c3a3ae0fcb5ba1449928000 142 Pfam PF00583 Acetyltransferase (GNAT) family 42 129 3.2E-15 T 12-10-2018 IPR000182 GNAT domain TDE_0191 f91ff1e07c3a3ae0fcb5ba1449928000 142 PIRSF PIRSF037663 1 141 9.7E-11 T 12-10-2018 IPR017255 Acetyltransferase, GNAT, predicted TDE_1543 a96ecddff911d991963696efc7e39851 340 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 8 336 29.706 T 12-10-2018 IPR003770 Endolytic murein transglycosylase TDE_1543 a96ecddff911d991963696efc7e39851 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 331 9.1E-81 T 12-10-2018 IPR003770 Endolytic murein transglycosylase TDE_1543 a96ecddff911d991963696efc7e39851 340 Gene3D G3DSA:1.10.8.1150 36 109 2.4E-14 T 12-10-2018 TDE_1543 a96ecddff911d991963696efc7e39851 340 Pfam PF02618 YceG-like family 42 328 2.5E-74 T 12-10-2018 IPR003770 Endolytic murein transglycosylase TDE_1790 7ea4b68466cb918f696d91a2107dda6a 128 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 35 120 2.2E-13 T 12-10-2018 IPR009241 Toxin HigB-like TDE_0535 02f310abbdde3a2c9dac98672ba759c4 232 Pfam PF00005 ABC transporter 25 173 1.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0535 02f310abbdde3a2c9dac98672ba759c4 232 Gene3D G3DSA:3.40.50.300 3 229 5.9E-69 T 12-10-2018 TDE_0535 02f310abbdde3a2c9dac98672ba759c4 232 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0535 02f310abbdde3a2c9dac98672ba759c4 232 SMART SM00382 34 221 4.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0535 02f310abbdde3a2c9dac98672ba759c4 232 SUPERFAMILY SSF52540 5 226 4.91E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0260 430b5ab5555d4729f8367d8263734bda 303 Gene3D G3DSA:3.40.50.360 2 148 1.2E-16 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0260 430b5ab5555d4729f8367d8263734bda 303 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 217 228 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_0260 430b5ab5555d4729f8367d8263734bda 303 Pfam PF13237 4Fe-4S dicluster domain 210 257 7.7E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_0260 430b5ab5555d4729f8367d8263734bda 303 Gene3D G3DSA:3.30.70.20 212 266 1.0E-10 T 12-10-2018 TDE_0260 430b5ab5555d4729f8367d8263734bda 303 SUPERFAMILY SSF54862 208 268 1.29E-12 T 12-10-2018 TDE_0260 430b5ab5555d4729f8367d8263734bda 303 SUPERFAMILY SSF52218 1 142 3.61E-17 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0260 430b5ab5555d4729f8367d8263734bda 303 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 247 258 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_1053 8d97e2ac1b94c22de0c10b4f79a8ef2f 598 Gene3D G3DSA:1.25.40.10 356 523 1.5E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1053 8d97e2ac1b94c22de0c10b4f79a8ef2f 598 Gene3D G3DSA:1.25.40.10 184 355 2.6E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1053 8d97e2ac1b94c22de0c10b4f79a8ef2f 598 SUPERFAMILY SSF48452 355 584 5.22E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1053 8d97e2ac1b94c22de0c10b4f79a8ef2f 598 SUPERFAMILY SSF48452 195 327 7.59E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1053 8d97e2ac1b94c22de0c10b4f79a8ef2f 598 Gene3D G3DSA:1.25.40.10 524 595 2.9E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1053 8d97e2ac1b94c22de0c10b4f79a8ef2f 598 SMART SM00028 273 306 180.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1053 8d97e2ac1b94c22de0c10b4f79a8ef2f 598 SMART SM00028 549 582 200.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1053 8d97e2ac1b94c22de0c10b4f79a8ef2f 598 SMART SM00028 205 238 0.13 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2485 b21fd5eef82c387169c490601a315483 406 SUPERFAMILY SSF117892 163 270 1.7E-5 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily TDE_2485 b21fd5eef82c387169c490601a315483 406 Pfam PF13421 SPFH domain-Band 7 family 55 268 1.4E-23 T 12-10-2018 IPR033880 SPFH domain, YdjI-like TDE_2485 b21fd5eef82c387169c490601a315483 406 Pfam PF13240 zinc-ribbon domain 385 406 7.7E-9 T 12-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 TDE_0839 5ffb1430773d7234e71c212fc31cd3a9 235 SUPERFAMILY SSF52821 137 222 1.31E-21 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily TDE_0839 5ffb1430773d7234e71c212fc31cd3a9 235 SUPERFAMILY SSF52821 8 118 2.23E-18 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily TDE_0839 5ffb1430773d7234e71c212fc31cd3a9 235 Pfam PF00581 Rhodanese-like domain 137 222 1.6E-12 T 12-10-2018 IPR001763 Rhodanese-like domain TDE_0839 5ffb1430773d7234e71c212fc31cd3a9 235 Pfam PF00581 Rhodanese-like domain 37 116 3.3E-9 T 12-10-2018 IPR001763 Rhodanese-like domain TDE_0839 5ffb1430773d7234e71c212fc31cd3a9 235 Gene3D G3DSA:3.40.250.10 34 132 1.9E-18 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily TDE_0839 5ffb1430773d7234e71c212fc31cd3a9 235 Gene3D G3DSA:3.40.250.10 136 235 5.3E-22 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily TDE_0839 5ffb1430773d7234e71c212fc31cd3a9 235 SMART SM00450 32 128 4.7E-7 T 12-10-2018 IPR001763 Rhodanese-like domain TDE_0839 5ffb1430773d7234e71c212fc31cd3a9 235 SMART SM00450 132 228 6.4E-15 T 12-10-2018 IPR001763 Rhodanese-like domain TDE_0452 97a4aa4934e6fd8e70d9220e29edcb49 64 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 10 60 2.2E-6 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TDE_0452 97a4aa4934e6fd8e70d9220e29edcb49 64 SUPERFAMILY SSF54786 8 61 1.29E-8 T 12-10-2018 TDE_0452 97a4aa4934e6fd8e70d9220e29edcb49 64 Gene3D G3DSA:3.30.920.30 5 61 6.2E-8 T 12-10-2018 IPR038570 HicA superfamily TDE_1098 ac85b792a910783480431a36c124bd84 302 SUPERFAMILY SSF56112 6 212 2.74E-8 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily TDE_2294 863cac6393aab6a99c0fcde7d7c96b47 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 179 4.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TDE_2294 863cac6393aab6a99c0fcde7d7c96b47 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 4.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TDE_2294 863cac6393aab6a99c0fcde7d7c96b47 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 4.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TDE_2294 863cac6393aab6a99c0fcde7d7c96b47 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 197 3.7E-15 T 12-10-2018 TDE_2294 863cac6393aab6a99c0fcde7d7c96b47 233 Gene3D G3DSA:3.40.50.1000 7 201 4.6E-26 T 12-10-2018 IPR023214 HAD superfamily TDE_2294 863cac6393aab6a99c0fcde7d7c96b47 233 Gene3D G3DSA:1.10.150.520 19 101 4.6E-26 T 12-10-2018 TDE_2294 863cac6393aab6a99c0fcde7d7c96b47 233 SUPERFAMILY SSF56784 5 231 6.54E-30 T 12-10-2018 IPR036412 HAD-like superfamily TDE_0286 a650f58411a4c1873ddf2d0cdf7ff326 536 Gene3D G3DSA:3.40.50.300 286 536 3.2E-42 T 12-10-2018 TDE_0286 a650f58411a4c1873ddf2d0cdf7ff326 536 SMART SM00382 341 519 0.001 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0286 a650f58411a4c1873ddf2d0cdf7ff326 536 SUPERFAMILY SSF90123 6 464 1.07E-8 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0286 a650f58411a4c1873ddf2d0cdf7ff326 536 SUPERFAMILY SSF52540 317 517 3.12E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0286 a650f58411a4c1873ddf2d0cdf7ff326 536 Pfam PF00005 ABC transporter 333 472 4.4E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2335 d589f8431134077a25575240117d1428 745 Pfam PF13361 UvrD-like helicase C-terminal domain 272 629 2.1E-63 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TDE_2335 d589f8431134077a25575240117d1428 745 SUPERFAMILY SSF52540 4 655 1.38E-151 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2335 d589f8431134077a25575240117d1428 745 Gene3D G3DSA:3.40.50.300 10 267 3.5E-90 T 12-10-2018 TDE_2335 d589f8431134077a25575240117d1428 745 Gene3D G3DSA:3.40.50.300 276 649 1.2E-95 T 12-10-2018 TDE_2335 d589f8431134077a25575240117d1428 745 Gene3D G3DSA:1.10.10.160 110 184 3.5E-90 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily TDE_2335 d589f8431134077a25575240117d1428 745 Gene3D G3DSA:1.10.486.10 377 553 1.2E-95 T 12-10-2018 TDE_2335 d589f8431134077a25575240117d1428 745 Pfam PF13245 AAA domain 14 252 2.0E-37 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 Gene3D G3DSA:3.30.390.30 326 444 1.1E-29 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 6.1E-17 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 6.1E-17 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 6.1E-17 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 6.1E-17 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 306 4.8E-65 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 SUPERFAMILY SSF55424 322 443 2.92E-29 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 7.5E-23 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 7.5E-23 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 7.5E-23 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 7.5E-23 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 7.5E-23 T 12-10-2018 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 333 430 1.4E-10 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 Gene3D G3DSA:3.50.50.60 118 242 9.7E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 SUPERFAMILY SSF51905 2 315 3.31E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0096 ffcd6e2c0e047f85698064b01df2ba36 444 Gene3D G3DSA:3.50.50.60 4 315 9.7E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_0320 746016c1da51f63b6e919cb2c2baa24a 432 Gene3D G3DSA:3.30.465.10 331 418 1.7E-14 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TDE_0320 746016c1da51f63b6e919cb2c2baa24a 432 SMART SM01091 342 420 8.2E-14 T 12-10-2018 IPR005170 Transporter-associated domain TDE_0320 746016c1da51f63b6e919cb2c2baa24a 432 Pfam PF01595 Domain of unknown function DUF21 12 187 2.0E-37 T 12-10-2018 IPR002550 CNNM, transmembrane domain TDE_0320 746016c1da51f63b6e919cb2c2baa24a 432 Pfam PF03471 Transporter associated domain 344 415 9.6E-15 T 12-10-2018 IPR005170 Transporter-associated domain TDE_0320 746016c1da51f63b6e919cb2c2baa24a 432 Gene3D G3DSA:3.10.580.10 184 330 4.7E-43 T 12-10-2018 TDE_0320 746016c1da51f63b6e919cb2c2baa24a 432 SUPERFAMILY SSF56176 345 414 1.47E-13 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TDE_0320 746016c1da51f63b6e919cb2c2baa24a 432 SUPERFAMILY SSF54631 199 333 7.96E-27 T 12-10-2018 TDE_0320 746016c1da51f63b6e919cb2c2baa24a 432 Pfam PF00571 CBS domain 275 322 1.7E-4 T 12-10-2018 IPR000644 CBS domain TDE_0320 746016c1da51f63b6e919cb2c2baa24a 432 Pfam PF00571 CBS domain 206 261 3.8E-7 T 12-10-2018 IPR000644 CBS domain TDE_1733 3997581b528a09d32db855a33f62feb9 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 1.2E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TDE_1733 3997581b528a09d32db855a33f62feb9 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.2E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TDE_1733 3997581b528a09d32db855a33f62feb9 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.2E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TDE_1733 3997581b528a09d32db855a33f62feb9 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 1.2E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TDE_1733 3997581b528a09d32db855a33f62feb9 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 4.2E-88 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TDE_1733 3997581b528a09d32db855a33f62feb9 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 38.191 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TDE_1733 3997581b528a09d32db855a33f62feb9 248 Pfam PF00557 Metallopeptidase family M24 12 237 1.0E-47 T 12-10-2018 IPR000994 Peptidase M24 TDE_1733 3997581b528a09d32db855a33f62feb9 248 SUPERFAMILY SSF55920 1 246 1.11E-75 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like TDE_1733 3997581b528a09d32db855a33f62feb9 248 Gene3D G3DSA:3.90.230.10 1 248 8.1E-93 T 12-10-2018 TDE_1733 3997581b528a09d32db855a33f62feb9 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 164 182 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TDE_1330 14fdea5c21755bf46a197e2e9bfc48f2 151 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 151 75.807 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TDE_1330 14fdea5c21755bf46a197e2e9bfc48f2 151 Pfam PF03477 ATP cone domain 50 137 2.2E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TDE_1330 14fdea5c21755bf46a197e2e9bfc48f2 151 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 148 4.8E-55 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TDE_2173 49af86493a6a080616b5ddd389fbd53e 83 Pfam PF12958 Protein of unknown function (DUF3847) 7 75 2.0E-13 T 12-10-2018 IPR024215 Protein of unknown function DUF3847 TDE_1256 cf41dd011ad55247660751e43088ac4e 392 Pfam PF13487 HD domain 211 270 2.4E-8 T 12-10-2018 TDE_1256 cf41dd011ad55247660751e43088ac4e 392 SUPERFAMILY SSF109604 153 316 2.14E-16 T 12-10-2018 TDE_1256 cf41dd011ad55247660751e43088ac4e 392 Gene3D G3DSA:1.10.3210.10 3 320 7.8E-48 T 12-10-2018 TDE_1256 cf41dd011ad55247660751e43088ac4e 392 SMART SM00471 154 289 2.1E-5 T 12-10-2018 IPR003607 HD/PDEase domain TDE_2052 4474ae95d365c364c74d6b1f60a8419e 400 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 208 227 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TDE_2052 4474ae95d365c364c74d6b1f60a8419e 400 Gene3D G3DSA:3.90.1150.10 3 390 4.1E-148 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TDE_2052 4474ae95d365c364c74d6b1f60a8419e 400 SUPERFAMILY SSF53383 8 393 2.53E-108 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_2052 4474ae95d365c364c74d6b1f60a8419e 400 Gene3D G3DSA:3.40.640.10 27 287 4.1E-148 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TDE_2052 4474ae95d365c364c74d6b1f60a8419e 400 Pfam PF00266 Aminotransferase class-V 17 385 1.5E-136 T 12-10-2018 IPR000192 Aminotransferase class V domain TDE_2052 4474ae95d365c364c74d6b1f60a8419e 400 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 2 397 8.2E-164 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TDE_2422 c1c5d684ef0897ac895d598f575db912 129 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 128 2.0E-20 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2422 c1c5d684ef0897ac895d598f575db912 129 SUPERFAMILY SSF48300 5 62 2.22E-16 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2422 c1c5d684ef0897ac895d598f575db912 129 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 128 2.2E-47 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2422 c1c5d684ef0897ac895d598f575db912 129 SUPERFAMILY SSF54736 55 128 3.84E-20 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TDE_2422 c1c5d684ef0897ac895d598f575db912 129 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 1.5E-20 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2422 c1c5d684ef0897ac895d598f575db912 129 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 129 23.966 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2422 c1c5d684ef0897ac895d598f575db912 129 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 128 1.3E-23 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2422 c1c5d684ef0897ac895d598f575db912 129 Gene3D G3DSA:1.20.5.710 4 55 1.3E-22 T 12-10-2018 TDE_2422 c1c5d684ef0897ac895d598f575db912 129 Gene3D G3DSA:3.30.1390.10 56 129 3.1E-27 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TDE_1888 8fb1deb0ddf1bb9f95ac23189c7785fb 125 Pfam PF04519 Polymer-forming cytoskeletal 19 115 3.2E-22 T 12-10-2018 IPR007607 Bactofilin A/B TDE_2320 1a3d2916473cdf8f62d1504cfbd556a4 213 Gene3D G3DSA:1.10.1740.10 10 134 8.9E-28 T 12-10-2018 TDE_2320 1a3d2916473cdf8f62d1504cfbd556a4 213 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 187 3.4E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TDE_2320 1a3d2916473cdf8f62d1504cfbd556a4 213 Pfam PF04542 Sigma-70 region 2 38 102 6.5E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TDE_2320 1a3d2916473cdf8f62d1504cfbd556a4 213 Pfam PF08281 Sigma-70, region 4 131 182 3.1E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TDE_2320 1a3d2916473cdf8f62d1504cfbd556a4 213 Gene3D G3DSA:1.10.10.10 135 192 5.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_2320 1a3d2916473cdf8f62d1504cfbd556a4 213 SUPERFAMILY SSF88659 120 188 1.51E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TDE_2320 1a3d2916473cdf8f62d1504cfbd556a4 213 SUPERFAMILY SSF88946 13 121 5.49E-25 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TDE_0675 7449d03c1bb0db7c5af506caafcb57f9 285 SUPERFAMILY SSF52467 2 284 1.03E-40 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TDE_0675 7449d03c1bb0db7c5af506caafcb57f9 285 Gene3D G3DSA:3.40.50.1220 11 127 8.7E-11 T 12-10-2018 TDE_0675 7449d03c1bb0db7c5af506caafcb57f9 285 Gene3D G3DSA:3.30.1600.10 32 179 8.7E-11 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily TDE_2566 e87f1a0ff11feec00a3b314edc4543b8 951 Gene3D G3DSA:2.60.40.10 529 620 8.6E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_0930 afee00cc3803331ccbf8e38223c04ce0 281 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 219 273 5.7E-16 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 TDE_0930 afee00cc3803331ccbf8e38223c04ce0 281 Gene3D G3DSA:3.30.70.120 192 266 1.8E-13 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TDE_0930 afee00cc3803331ccbf8e38223c04ce0 281 PIRSF PIRSF006483 1 279 2.4E-66 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT TDE_0930 afee00cc3803331ccbf8e38223c04ce0 281 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 214 1.1E-59 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 SMART SM00928 37 82 1.3E-11 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 226 520 1.0E-27 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 PRINTS PR00419 Adrenodoxin reductase family signature 226 248 5.7E-15 T 12-10-2018 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 PRINTS PR00419 Adrenodoxin reductase family signature 358 372 5.7E-15 T 12-10-2018 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 PRINTS PR00419 Adrenodoxin reductase family signature 249 262 5.7E-15 T 12-10-2018 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 SUPERFAMILY SSF46548 102 235 2.41E-16 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 SUPERFAMILY SSF51971 427 531 2.12E-5 T 12-10-2018 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 40 122 8.8E-22 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 SUPERFAMILY SSF140490 34 130 4.97E-25 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 SUPERFAMILY SSF51971 223 467 3.88E-57 T 12-10-2018 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 Gene3D G3DSA:3.50.50.60 353 550 1.3E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 Gene3D G3DSA:3.50.50.60 224 346 3.4E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 Gene3D G3DSA:1.10.1060.10 91 223 1.5E-23 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TDE_1594 30d42f72fe2102ddd094d25b61dc684b 609 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 130 211 3.4E-16 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TDE_1209 7e412f30cee507366dac75cd54602f56 305 Pfam PF00589 Phage integrase family 130 291 2.7E-39 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TDE_1209 7e412f30cee507366dac75cd54602f56 305 Gene3D G3DSA:1.10.443.10 112 299 6.5E-50 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TDE_1209 7e412f30cee507366dac75cd54602f56 305 Gene3D G3DSA:1.10.150.130 1 106 1.2E-19 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal TDE_1209 7e412f30cee507366dac75cd54602f56 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 85 1.6E-16 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TDE_1209 7e412f30cee507366dac75cd54602f56 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 305 50.78 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD TDE_1209 7e412f30cee507366dac75cd54602f56 305 SUPERFAMILY SSF56349 2 295 2.15E-51 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TDE_1321 2683bb03bc4d975af498ce453a54081a 202 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 9 191 2.9E-51 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal TDE_1321 2683bb03bc4d975af498ce453a54081a 202 SUPERFAMILY SSF54980 133 195 6.19E-10 T 12-10-2018 IPR035647 EF-G domain III/V-like TDE_1321 2683bb03bc4d975af498ce453a54081a 202 SUPERFAMILY SSF54211 3 127 2.28E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_1321 2683bb03bc4d975af498ce453a54081a 202 Gene3D G3DSA:3.30.230.30 1 129 1.7E-43 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily TDE_1321 2683bb03bc4d975af498ce453a54081a 202 Pfam PF09186 Domain of unknown function (DUF1949) 137 190 1.9E-6 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal TDE_1321 2683bb03bc4d975af498ce453a54081a 202 Pfam PF01205 Uncharacterized protein family UPF0029 15 120 3.1E-26 T 12-10-2018 IPR001498 Impact, N-terminal TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SUPERFAMILY SSF48452 611 738 4.55E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SMART SM00028 355 388 0.99 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SMART SM00028 286 319 25.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SMART SM00028 252 285 14.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SMART SM00028 615 648 4.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SMART SM00028 479 509 180.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SMART SM00028 409 442 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SMART SM00028 682 715 100.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 Gene3D G3DSA:1.25.40.10 236 340 3.9E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 Pfam PF13181 Tetratricopeptide repeat 358 387 0.011 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 Pfam PF13181 Tetratricopeptide repeat 615 647 0.0042 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SUPERFAMILY SSF48452 488 599 6.12E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SUPERFAMILY SSF48452 246 338 1.17E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 Gene3D G3DSA:1.25.40.10 691 760 1.5E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 Pfam PF14559 Tetratricopeptide repeat 693 758 7.9E-8 T 12-10-2018 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 Gene3D G3DSA:1.25.40.10 606 690 2.7E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 Gene3D G3DSA:2.60.120.560 40 222 1.7E-7 T 12-10-2018 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 Gene3D G3DSA:1.25.40.10 341 603 2.5E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1687 017b8bf4875d2f75a14fd0258fafe5c9 760 SUPERFAMILY SSF48452 356 524 2.72E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1605 1779a9735e62eb229e006016eb2a7956 192 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 4 185 1.5E-35 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_1605 1779a9735e62eb229e006016eb2a7956 192 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 1 189 1.9E-53 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_2252 9a91e40f80cfe51c39d9eb7f53ef03a7 65 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 6 62 2.9E-19 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TDE_2252 9a91e40f80cfe51c39d9eb7f53ef03a7 65 SUPERFAMILY SSF54786 1 63 3.61E-17 T 12-10-2018 TDE_2252 9a91e40f80cfe51c39d9eb7f53ef03a7 65 Gene3D G3DSA:3.30.920.30 1 62 1.6E-27 T 12-10-2018 IPR038570 HicA superfamily TDE_0673 9826d56689d355d6a58c90cbc22597b4 347 SUPERFAMILY SSF103481 200 286 6.8E-11 T 12-10-2018 TDE_0673 9826d56689d355d6a58c90cbc22597b4 347 Pfam PF00892 EamA-like transporter family 153 284 2.3E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_0673 9826d56689d355d6a58c90cbc22597b4 347 Pfam PF00892 EamA-like transporter family 6 142 1.1E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_0673 9826d56689d355d6a58c90cbc22597b4 347 SUPERFAMILY SSF103481 62 144 2.35E-9 T 12-10-2018 TDE_0205 8e6da2087e9517fa3ed2927be9d9f58a 354 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 178 350 3.9E-24 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0205 8e6da2087e9517fa3ed2927be9d9f58a 354 SMART SM00044 149 330 3.0E-7 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0205 8e6da2087e9517fa3ed2927be9d9f58a 354 Gene3D G3DSA:3.30.70.1230 165 354 2.6E-44 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0205 8e6da2087e9517fa3ed2927be9d9f58a 354 SUPERFAMILY SSF55073 179 351 1.04E-37 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0723 80ea383c41ac40179bfc6223e2d6d388 425 SUPERFAMILY SSF52096 53 417 6.96E-38 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_0723 80ea383c41ac40179bfc6223e2d6d388 425 Pfam PF03572 Peptidase family S41 186 400 6.9E-22 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TDE_2627 69cc3a00e9a97829ad59f852287587bd 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_2627 69cc3a00e9a97829ad59f852287587bd 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_2627 69cc3a00e9a97829ad59f852287587bd 202 Gene3D G3DSA:1.10.357.10 3 193 2.5E-19 T 12-10-2018 TDE_2627 69cc3a00e9a97829ad59f852287587bd 202 SUPERFAMILY SSF46689 2 79 3.8E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_2627 69cc3a00e9a97829ad59f852287587bd 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.0E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_2284 da8710d57c14f68e5d7ed4112d8d2b82 323 Gene3D G3DSA:2.40.30.170 168 258 1.1E-11 T 12-10-2018 TDE_2284 da8710d57c14f68e5d7ed4112d8d2b82 323 Gene3D G3DSA:2.40.420.20 259 318 3.4E-8 T 12-10-2018 TDE_2284 da8710d57c14f68e5d7ed4112d8d2b82 323 SUPERFAMILY SSF111369 56 222 9.15E-11 T 12-10-2018 TDE_2284 da8710d57c14f68e5d7ed4112d8d2b82 323 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 220 7.5E-19 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TDE_2284 da8710d57c14f68e5d7ed4112d8d2b82 323 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 318 2.0E-6 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TDE_0715 4f38b1a695cdc9a3c5514e0abb47d08d 447 SUPERFAMILY SSF52096 61 439 9.94E-41 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_0715 4f38b1a695cdc9a3c5514e0abb47d08d 447 Pfam PF03572 Peptidase family S41 210 423 9.0E-24 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TDE_0157 39472539da607cebb6a7b40be7b6d7b7 590 SUPERFAMILY SSF53613 252 579 1.71E-82 T 12-10-2018 IPR029056 Ribokinase-like TDE_0157 39472539da607cebb6a7b40be7b6d7b7 590 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TDE_0157 39472539da607cebb6a7b40be7b6d7b7 590 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TDE_0157 39472539da607cebb6a7b40be7b6d7b7 590 Gene3D G3DSA:3.40.1190.20 244 590 2.0E-135 T 12-10-2018 IPR029056 Ribokinase-like TDE_0157 39472539da607cebb6a7b40be7b6d7b7 590 Gene3D G3DSA:3.20.20.70 1 210 1.2E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0157 39472539da607cebb6a7b40be7b6d7b7 590 Pfam PF01081 KDPG and KHG aldolase 7 197 2.6E-70 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TDE_0157 39472539da607cebb6a7b40be7b6d7b7 590 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 205 7.8E-77 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TDE_0157 39472539da607cebb6a7b40be7b6d7b7 590 SUPERFAMILY SSF51569 3 207 1.15E-65 T 12-10-2018 TDE_0157 39472539da607cebb6a7b40be7b6d7b7 590 Pfam PF00294 pfkB family carbohydrate kinase 253 560 3.3E-32 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB TDE_2499 169e5f6ac642b567b2cf42dc50ef7a48 253 Pfam PF13649 Methyltransferase domain 52 147 9.5E-17 T 12-10-2018 TDE_2499 169e5f6ac642b567b2cf42dc50ef7a48 253 Gene3D G3DSA:2.20.25.110 155 211 3.1E-42 T 12-10-2018 TDE_2499 169e5f6ac642b567b2cf42dc50ef7a48 253 Gene3D G3DSA:3.40.50.150 33 236 3.1E-42 T 12-10-2018 TDE_2499 169e5f6ac642b567b2cf42dc50ef7a48 253 SUPERFAMILY SSF53335 27 253 3.29E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2559 b4c10dee04fff3e8f42ad4e1f3e3f68f 606 SUPERFAMILY SSF90123 4 315 7.72E-47 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2559 b4c10dee04fff3e8f42ad4e1f3e3f68f 606 Pfam PF00664 ABC transporter transmembrane region 18 283 4.2E-18 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2559 b4c10dee04fff3e8f42ad4e1f3e3f68f 606 Gene3D G3DSA:3.40.50.300 346 604 4.4E-68 T 12-10-2018 TDE_2559 b4c10dee04fff3e8f42ad4e1f3e3f68f 606 SMART SM00382 379 571 8.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2559 b4c10dee04fff3e8f42ad4e1f3e3f68f 606 SUPERFAMILY SSF52540 352 595 1.09E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2559 b4c10dee04fff3e8f42ad4e1f3e3f68f 606 Gene3D G3DSA:1.20.1560.10 2 320 1.8E-40 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2559 b4c10dee04fff3e8f42ad4e1f3e3f68f 606 Pfam PF00005 ABC transporter 370 524 1.0E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0480 c249f357a78a9869775b13224c6672f4 478 Gene3D G3DSA:3.20.20.80 23 336 2.1E-97 T 12-10-2018 TDE_0480 c249f357a78a9869775b13224c6672f4 478 SMART SM00812 25 362 2.6E-130 T 12-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TDE_0480 c249f357a78a9869775b13224c6672f4 478 PRINTS PR00741 Glycosyl hydrolase family 29 signature 107 123 4.0E-14 T 12-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TDE_0480 c249f357a78a9869775b13224c6672f4 478 PRINTS PR00741 Glycosyl hydrolase family 29 signature 288 309 4.0E-14 T 12-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TDE_0480 c249f357a78a9869775b13224c6672f4 478 PRINTS PR00741 Glycosyl hydrolase family 29 signature 152 171 4.0E-14 T 12-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TDE_0480 c249f357a78a9869775b13224c6672f4 478 Pfam PF01120 Alpha-L-fucosidase 29 331 2.8E-76 T 12-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 TDE_0480 c249f357a78a9869775b13224c6672f4 478 SUPERFAMILY SSF51445 25 331 6.18E-90 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_1433 400d3f729baaf3a20c6f59c6f9a30599 340 Pfam PF00535 Glycosyl transferase family 2 4 113 4.7E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TDE_1433 400d3f729baaf3a20c6f59c6f9a30599 340 SUPERFAMILY SSF53448 2 205 7.5E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1433 400d3f729baaf3a20c6f59c6f9a30599 340 Gene3D G3DSA:3.90.550.10 2 197 7.7E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1430 f112f21671346445ffdee0d29056c783 333 Pfam PF00535 Glycosyl transferase family 2 7 130 1.6E-23 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TDE_1430 f112f21671346445ffdee0d29056c783 333 Gene3D G3DSA:3.90.550.10 2 266 5.3E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1430 f112f21671346445ffdee0d29056c783 333 SUPERFAMILY SSF53448 5 227 2.25E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 Gene3D G3DSA:1.25.40.10 62 212 1.4E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 SUPERFAMILY SSF48452 73 201 1.08E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 Pfam PF13424 Tetratricopeptide repeat 301 365 4.5E-8 T 12-10-2018 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 SMART SM00028 168 201 150.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 SMART SM00028 335 368 9.2E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 SMART SM00028 259 292 0.005 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 SMART SM00028 301 334 8.2E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 SMART SM00028 86 119 490.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 Pfam PF07719 Tetratricopeptide repeat 260 291 1.9E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 Gene3D G3DSA:1.25.40.10 213 377 5.5E-29 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0213 79eebf2c02d54afa9fe4a17ab4f2e697 380 SUPERFAMILY SSF48452 226 374 4.1E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1404 5e444c19aa86e07729d12c171c68af40 439 Pfam PF08239 Bacterial SH3 domain 113 177 1.4E-10 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type TDE_1404 5e444c19aa86e07729d12c171c68af40 439 Gene3D G3DSA:2.30.30.40 96 178 1.3E-12 T 12-10-2018 TDE_1207 202d29e3219b47e8c9e7c276c8310fdc 310 Pfam PF02481 DNA recombination-mediator protein A 75 281 3.3E-70 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TDE_1207 202d29e3219b47e8c9e7c276c8310fdc 310 SUPERFAMILY SSF102405 83 287 5.49E-33 T 12-10-2018 TDE_1207 202d29e3219b47e8c9e7c276c8310fdc 310 Gene3D G3DSA:3.40.50.450 10 291 6.8E-79 T 12-10-2018 TDE_1207 202d29e3219b47e8c9e7c276c8310fdc 310 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 290 5.5E-76 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TDE_1610 f7ba2624eb0582806ef829b58c0b9103 100 Pfam PF01381 Helix-turn-helix 17 68 6.2E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1610 f7ba2624eb0582806ef829b58c0b9103 100 SUPERFAMILY SSF47413 11 92 8.16E-20 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_1610 f7ba2624eb0582806ef829b58c0b9103 100 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 80 5.1E-24 T 12-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TDE_1610 f7ba2624eb0582806ef829b58c0b9103 100 SMART SM00530 13 69 0.0063 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1610 f7ba2624eb0582806ef829b58c0b9103 100 Gene3D G3DSA:1.10.260.40 4 98 9.3E-24 T 12-10-2018 TDE_2041 6a4af2d4e76a79da0ed853e82740484b 426 Pfam PF02687 FtsX-like permease family 294 419 1.0E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TDE_2041 6a4af2d4e76a79da0ed853e82740484b 426 Pfam PF12704 MacB-like periplasmic core domain 29 225 4.5E-12 T 12-10-2018 IPR025857 MacB-like periplasmic core domain TDE_2542 2c7ce65274de64a90a9e40f43f7aa87a 461 SUPERFAMILY SSF75011 143 300 1.57E-6 T 12-10-2018 TDE_2095 dd77de3955dba8a3d7824a59eb1e64f4 484 SUPERFAMILY SSF56601 4 364 6.61E-64 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TDE_2095 dd77de3955dba8a3d7824a59eb1e64f4 484 Gene3D G3DSA:3.40.710.10 1 363 8.6E-71 T 12-10-2018 TDE_2095 dd77de3955dba8a3d7824a59eb1e64f4 484 Pfam PF00144 Beta-lactamase 6 361 7.4E-49 T 12-10-2018 IPR001466 Beta-lactamase-related TDE_1407 6ae40486e5818df4e9c14bc2efea64a2 412 SUPERFAMILY SSF109604 6 359 1.09E-64 T 12-10-2018 TDE_1407 6ae40486e5818df4e9c14bc2efea64a2 412 SMART SM00471 53 187 2.2E-8 T 12-10-2018 IPR003607 HD/PDEase domain TDE_1407 6ae40486e5818df4e9c14bc2efea64a2 412 Pfam PF01966 HD domain 58 133 2.0E-7 T 12-10-2018 IPR006674 HD domain TDE_1407 6ae40486e5818df4e9c14bc2efea64a2 412 Gene3D G3DSA:1.10.3210.10 8 291 4.4E-64 T 12-10-2018 TDE_1313 67f630c31c60ca11d017a87d08da01d8 178 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 176 1.0E-39 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_1313 67f630c31c60ca11d017a87d08da01d8 178 SUPERFAMILY SSF51306 24 175 2.79E-35 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TDE_1313 67f630c31c60ca11d017a87d08da01d8 178 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 140 159 5.7E-9 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_1313 67f630c31c60ca11d017a87d08da01d8 178 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 25 41 5.7E-9 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_1313 67f630c31c60ca11d017a87d08da01d8 178 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 86 98 5.7E-9 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_1313 67f630c31c60ca11d017a87d08da01d8 178 Pfam PF00717 Peptidase S24-like 31 101 1.9E-11 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TDE_2512 e834f52a655a2726580ab0dcfff976b9 457 Gene3D G3DSA:3.40.309.10 214 409 6.3E-173 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TDE_2512 e834f52a655a2726580ab0dcfff976b9 457 PIRSF PIRSF036492 1 457 1.3E-185 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 TDE_2512 e834f52a655a2726580ab0dcfff976b9 457 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 210 217 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 TDE_2512 e834f52a655a2726580ab0dcfff976b9 457 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 238 249 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TDE_2512 e834f52a655a2726580ab0dcfff976b9 457 SUPERFAMILY SSF53720 4 445 1.44E-126 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TDE_2512 e834f52a655a2726580ab0dcfff976b9 457 Gene3D G3DSA:3.40.605.10 15 429 6.3E-173 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TDE_2512 e834f52a655a2726580ab0dcfff976b9 457 Pfam PF00171 Aldehyde dehydrogenase family 3 429 1.9E-94 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TDE_1517 af5042c7442e01aea3a66f2db323e5c3 149 Pfam PF04205 FMN-binding domain 45 140 2.3E-9 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TDE_1517 af5042c7442e01aea3a66f2db323e5c3 149 PIRSF PIRSF036531 1 146 7.7E-56 T 12-10-2018 IPR017058 Major membrane immunogen, tpp15, predicted TDE_1517 af5042c7442e01aea3a66f2db323e5c3 149 Gene3D G3DSA:3.90.1010.20 29 149 6.7E-16 T 12-10-2018 TDE_1517 af5042c7442e01aea3a66f2db323e5c3 149 SMART SM00900 44 142 1.1E-6 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TDE_0357 fa2adca72264e93f9bf54797e98730c4 211 Gene3D G3DSA:3.40.50.360 1 204 2.2E-33 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0357 fa2adca72264e93f9bf54797e98730c4 211 Pfam PF03358 NADPH-dependent FMN reductase 3 127 5.6E-20 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TDE_0357 fa2adca72264e93f9bf54797e98730c4 211 SUPERFAMILY SSF52218 1 209 1.09E-33 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0599 37ff590027429e78a438b9bcfb99ee71 128 SUPERFAMILY SSF88723 5 126 4.21E-27 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_0599 37ff590027429e78a438b9bcfb99ee71 128 Gene3D G3DSA:3.40.50.1010 8 127 1.8E-24 T 12-10-2018 TDE_0599 37ff590027429e78a438b9bcfb99ee71 128 Pfam PF01850 PIN domain 8 115 3.2E-13 T 12-10-2018 IPR002716 PIN domain TDE_0599 37ff590027429e78a438b9bcfb99ee71 128 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 8 126 10.41 T 12-10-2018 IPR022907 VapC family GO:0004540 TDE_2427 073caff0b3f7c4602953fd91a6985f21 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 1.0E-15 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TDE_2427 073caff0b3f7c4602953fd91a6985f21 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 59 2.0E-16 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 TDE_2427 073caff0b3f7c4602953fd91a6985f21 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 12.541 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TDE_2427 073caff0b3f7c4602953fd91a6985f21 59 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TDE_2427 073caff0b3f7c4602953fd91a6985f21 59 Gene3D G3DSA:1.20.5.1030 1 58 1.2E-16 T 12-10-2018 IPR038379 SecE superfamily TDE_1606 8a07935ab53195f9d60d805d9b8d079b 225 SUPERFAMILY SSF46689 6 67 1.44E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_1606 8a07935ab53195f9d60d805d9b8d079b 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1606 8a07935ab53195f9d60d805d9b8d079b 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1606 8a07935ab53195f9d60d805d9b8d079b 225 Gene3D G3DSA:1.10.357.10 7 100 1.1E-19 T 12-10-2018 TDE_1606 8a07935ab53195f9d60d805d9b8d079b 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 4.3E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_1678 7415845c95a70d44c84121c07db66b70 93 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 3.9E-17 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1678 7415845c95a70d44c84121c07db66b70 93 SUPERFAMILY SSF54995 1 93 1.57E-20 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1678 7415845c95a70d44c84121c07db66b70 93 Gene3D G3DSA:3.30.70.60 1 93 1.1E-20 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 TDE_1678 7415845c95a70d44c84121c07db66b70 93 ProSitePatterns PS01048 Ribosomal protein S6 signature. 42 51 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 TDE_1678 7415845c95a70d44c84121c07db66b70 93 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 93 15.731 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 TDE_1678 7415845c95a70d44c84121c07db66b70 93 Pfam PF01250 Ribosomal protein S6 3 90 4.0E-16 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2241 ec9b2e4137cba14819cf4d7458b7ae1a 381 Gene3D G3DSA:3.90.550.10 28 273 1.4E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_2241 ec9b2e4137cba14819cf4d7458b7ae1a 381 SUPERFAMILY SSF53448 29 289 4.69E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_2241 ec9b2e4137cba14819cf4d7458b7ae1a 381 Pfam PF00535 Glycosyl transferase family 2 34 158 1.2E-15 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TDE_1717 a2419882f096b84c841dadaac2341d2d 216 Pfam PF13505 Outer membrane protein beta-barrel domain 7 216 1.0E-7 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel TDE_1717 a2419882f096b84c841dadaac2341d2d 216 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 208 216 - T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 TDE_2400 d0e6fce4a5f14fc05f25a510c2ab20e1 51 Pfam PF00468 Ribosomal protein L34 1 44 4.6E-20 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2400 d0e6fce4a5f14fc05f25a510c2ab20e1 51 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.108 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2400 d0e6fce4a5f14fc05f25a510c2ab20e1 51 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.0E-22 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2400 d0e6fce4a5f14fc05f25a510c2ab20e1 51 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 2.0E-15 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1961 8777fb9807915f952cf3a776ed2b65b7 141 Gene3D G3DSA:3.40.50.1010 4 140 4.6E-28 T 12-10-2018 TDE_1961 8777fb9807915f952cf3a776ed2b65b7 141 SUPERFAMILY SSF88723 1 129 2.1E-25 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_1961 8777fb9807915f952cf3a776ed2b65b7 141 Pfam PF01850 PIN domain 5 122 5.8E-11 T 12-10-2018 IPR002716 PIN domain TDE_2289 8e7777e17d0ec019b4abdf36fc8b4857 550 SUPERFAMILY SSF55186 65 234 7.85E-30 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TDE_2289 8e7777e17d0ec019b4abdf36fc8b4857 550 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 286 484 8.7E-18 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 TDE_2289 8e7777e17d0ec019b4abdf36fc8b4857 550 PRINTS PR00988 Uridine kinase signature 316 327 1.7E-7 T 12-10-2018 TDE_2289 8e7777e17d0ec019b4abdf36fc8b4857 550 PRINTS PR00988 Uridine kinase signature 361 376 1.7E-7 T 12-10-2018 TDE_2289 8e7777e17d0ec019b4abdf36fc8b4857 550 PRINTS PR00988 Uridine kinase signature 284 301 1.7E-7 T 12-10-2018 TDE_2289 8e7777e17d0ec019b4abdf36fc8b4857 550 SUPERFAMILY SSF52540 282 482 4.27E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2289 8e7777e17d0ec019b4abdf36fc8b4857 550 SMART SM00382 283 444 0.0082 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2289 8e7777e17d0ec019b4abdf36fc8b4857 550 Gene3D G3DSA:3.40.50.300 225 496 2.3E-55 T 12-10-2018 TDE_2289 8e7777e17d0ec019b4abdf36fc8b4857 550 Gene3D G3DSA:3.30.980.10 66 205 2.3E-16 T 12-10-2018 TDE_1100 7515f58fe943b0f6a6744bc3954b271f 134 Gene3D G3DSA:3.40.630.30 1 130 1.6E-26 T 12-10-2018 TDE_1100 7515f58fe943b0f6a6744bc3954b271f 134 Pfam PF13673 Acetyltransferase (GNAT) domain 25 123 4.5E-9 T 12-10-2018 IPR000182 GNAT domain TDE_1100 7515f58fe943b0f6a6744bc3954b271f 134 SUPERFAMILY SSF55729 11 124 7.38E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_1521 0ec1e6040ca2d7b9b05651c13bb3400b 187 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 14 176 1.0E-52 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 TDE_1521 0ec1e6040ca2d7b9b05651c13bb3400b 187 SUPERFAMILY SSF117457 7 176 2.88E-64 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 TDE_1521 0ec1e6040ca2d7b9b05651c13bb3400b 187 Pfam PF05683 Fumarase C-terminus 10 176 2.2E-60 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 TDE_1521 0ec1e6040ca2d7b9b05651c13bb3400b 187 Gene3D G3DSA:3.20.130.10 1 176 6.8E-69 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 TDE_2529 6cdb98cd954fbf8f30abe0c72df300bf 86 Gene3D G3DSA:1.20.1280.290 7 86 4.0E-8 T 12-10-2018 TDE_2529 6cdb98cd954fbf8f30abe0c72df300bf 86 Pfam PF03083 Sugar efflux transporter for intercellular exchange 8 82 1.9E-6 T 12-10-2018 IPR004316 SWEET sugar transporter GO:0016021 Reactome: R-HSA-189200 TDE_1473 9807961e4ef8ccfde938b477723301a6 123 Gene3D G3DSA:3.30.160.170 23 119 1.3E-19 T 12-10-2018 IPR035924 FlaG-like superfamily TDE_1473 9807961e4ef8ccfde938b477723301a6 123 SUPERFAMILY SSF160214 18 121 6.54E-27 T 12-10-2018 IPR035924 FlaG-like superfamily TDE_1473 9807961e4ef8ccfde938b477723301a6 123 Pfam PF03646 FlaG protein 30 121 2.5E-26 T 12-10-2018 IPR005186 FlaG protein TDE_0121 7134062f131fc0fd246216109dcd7e5e 521 Pfam PF00884 Sulfatase 275 473 8.4E-11 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TDE_0121 7134062f131fc0fd246216109dcd7e5e 521 Gene3D G3DSA:3.40.720.10 161 476 1.8E-32 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TDE_0121 7134062f131fc0fd246216109dcd7e5e 521 SUPERFAMILY SSF53649 168 488 7.1E-21 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TDE_0932 d483988b46a16fadde03837969230fb1 936 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 674 853 7.8E-31 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0932 d483988b46a16fadde03837969230fb1 936 SMART SM00044 644 847 2.1E-18 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0932 d483988b46a16fadde03837969230fb1 936 Gene3D G3DSA:3.30.70.1230 664 871 7.2E-65 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0932 d483988b46a16fadde03837969230fb1 936 Pfam PF05226 CHASE2 domain 27 573 6.6E-33 T 12-10-2018 IPR007890 CHASE2 TDE_0932 d483988b46a16fadde03837969230fb1 936 SUPERFAMILY SSF55073 669 858 1.04E-53 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0932 d483988b46a16fadde03837969230fb1 936 SMART SM01080 40 578 2.7E-6 T 12-10-2018 IPR007890 CHASE2 TDE_1837 ac98e1ebd059c07ebfb0acc8eef38273 134 SUPERFAMILY SSF143100 5 65 4.45E-15 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like TDE_1837 ac98e1ebd059c07ebfb0acc8eef38273 134 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 5 108 1.4E-15 T 12-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system TDE_1837 ac98e1ebd059c07ebfb0acc8eef38273 134 Gene3D G3DSA:3.30.160.250 1 96 1.1E-18 T 12-10-2018 TDE_1029 79156413f1f67a83c1c03d83fc7400a4 146 Pfam PF00011 Hsp20/alpha crystallin family 44 143 4.5E-27 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain TDE_1029 79156413f1f67a83c1c03d83fc7400a4 146 Gene3D G3DSA:2.60.40.790 3 145 4.9E-38 T 12-10-2018 IPR008978 HSP20-like chaperone TDE_1029 79156413f1f67a83c1c03d83fc7400a4 146 SUPERFAMILY SSF49764 27 144 6.45E-38 T 12-10-2018 IPR008978 HSP20-like chaperone TDE_2005 c5756b7de8d3e555bb216cd182602282 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 29 1.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TDE_2005 c5756b7de8d3e555bb216cd182602282 184 Gene3D G3DSA:1.10.357.10 1 176 5.8E-13 T 12-10-2018 TDE_2005 c5756b7de8d3e555bb216cd182602282 184 SUPERFAMILY SSF46689 1 38 4.34E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 Gene3D G3DSA:1.10.1390.10 494 514 3.4E-6 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 485 502 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 512 36.702 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 Pfam PF00342 Phosphoglucose isomerase 56 511 3.9E-129 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 Gene3D G3DSA:3.40.50.10490 101 292 2.8E-160 T 12-10-2018 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 Gene3D G3DSA:3.40.50.10490 13 493 2.8E-160 T 12-10-2018 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 1.7E-42 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.7E-42 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 1.7E-42 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 471 485 1.7E-42 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 453 471 1.7E-42 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 PRINTS PR00662 Glucose-6-phosphate isomerase signature 485 498 1.7E-42 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_2573 abb20432ef3e08e3c6af4278e2cebb9e 525 SUPERFAMILY SSF53697 6 511 1.81E-150 T 12-10-2018 TDE_0780 b1f4bb5c83599757bcb9b3bac3d5aecc 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_0780 b1f4bb5c83599757bcb9b3bac3d5aecc 61 SUPERFAMILY SSF57716 7 61 3.64E-22 T 12-10-2018 TDE_0780 b1f4bb5c83599757bcb9b3bac3d5aecc 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 24.851 T 12-10-2018 IPR023053 Ribosomal protein S14, type Z TDE_0780 b1f4bb5c83599757bcb9b3bac3d5aecc 61 Gene3D G3DSA:4.10.830.10 1 61 2.8E-29 T 12-10-2018 TDE_0780 b1f4bb5c83599757bcb9b3bac3d5aecc 61 Pfam PF00253 Ribosomal protein S14p/S29e 12 60 3.7E-26 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1412 4bd17179507637497ee36b6f8f36c67b 574 Gene3D G3DSA:3.10.580.10 420 558 3.5E-7 T 12-10-2018 TDE_1412 4bd17179507637497ee36b6f8f36c67b 574 SUPERFAMILY SSF54631 445 567 1.48E-11 T 12-10-2018 TDE_1412 4bd17179507637497ee36b6f8f36c67b 574 Pfam PF00999 Sodium/hydrogen exchanger family 25 400 5.0E-36 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TDE_1412 4bd17179507637497ee36b6f8f36c67b 574 Pfam PF00571 CBS domain 447 491 0.0052 T 12-10-2018 IPR000644 CBS domain TDE_1412 4bd17179507637497ee36b6f8f36c67b 574 Gene3D G3DSA:1.20.1530.20 19 416 5.3E-38 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily TDE_1261 e391be413f1398deb2dabed005648eeb 522 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 25 517 1.2E-133 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TDE_1261 e391be413f1398deb2dabed005648eeb 522 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 63 518 3.5E-141 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TDE_0363 e5f65453a03632f3b98e602093d2bcf3 147 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 4 48 2.0E-8 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 TDE_0363 e5f65453a03632f3b98e602093d2bcf3 147 Pfam PF12728 Helix-turn-helix domain 4 50 3.6E-12 T 12-10-2018 TDE_0363 e5f65453a03632f3b98e602093d2bcf3 147 SUPERFAMILY SSF46955 3 50 1.01E-10 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily TDE_0363 e5f65453a03632f3b98e602093d2bcf3 147 Gene3D G3DSA:1.10.1660.10 1 52 2.0E-8 T 12-10-2018 TDE_2575 e6035b4413ad60685486393304db386e 204 SUPERFAMILY SSF51182 1 178 2.13E-30 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily TDE_2575 e6035b4413ad60685486393304db386e 204 Gene3D G3DSA:2.60.120.10 12 112 5.3E-15 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_2575 e6035b4413ad60685486393304db386e 204 Gene3D G3DSA:2.60.120.10 7 159 5.3E-15 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_2575 e6035b4413ad60685486393304db386e 204 Pfam PF05962 HutD 9 183 3.6E-29 T 12-10-2018 IPR010282 Uncharacterised protein family HutD/Ves TDE_0220 4d7c509ac7063b8ae2660f1553cf69fe 46 Pfam PF07878 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 10 42 1.4E-7 T 12-10-2018 IPR012869 CopG-like ribbon-helix-helix domain TDE_0220 4d7c509ac7063b8ae2660f1553cf69fe 46 SUPERFAMILY SSF47598 4 41 2.28E-6 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TDE_0809 536fd4dd5655f51d2b3f9f962ab1a3d5 381 Pfam PF15428 Immunity protein 26 164 281 1.4E-24 T 12-10-2018 IPR029278 Immunity protein 26 TDE_0419 5e432f4b78ccace5e7412ef773913cb5 427 TIGRFAM TIGR01781 Trep_dent_lipo: Treponema denticola clustered lipoprotein 2 400 1.6E-172 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_0419 5e432f4b78ccace5e7412ef773913cb5 427 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 400 2.9E-150 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SUPERFAMILY SSF51126 322 637 5.61E-17 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SUPERFAMILY SSF51126 713 971 1.5E-10 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SMART SM00710 517 547 5000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SMART SM00710 494 514 4700.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SMART SM00710 398 428 1400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SMART SM00710 554 574 4200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SMART SM00710 458 483 1800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SMART SM00710 872 901 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SMART SM00710 584 610 9700.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_1362 2c69d738806219efaaf1b777f8977870 1023 SMART SM00710 611 639 760.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat TDE_0901 f7cbd3e35efad8ce265594a02089cfc4 151 Pfam PF01230 HIT domain 33 101 1.7E-5 T 12-10-2018 IPR001310 Histidine triad (HIT) protein TDE_0901 f7cbd3e35efad8ce265594a02089cfc4 151 Gene3D G3DSA:3.30.428.10 12 150 5.8E-35 T 12-10-2018 IPR036265 HIT-like superfamily TDE_0901 f7cbd3e35efad8ce265594a02089cfc4 151 SUPERFAMILY SSF54197 1 148 4.89E-29 T 12-10-2018 IPR036265 HIT-like superfamily TDE_1829 794f192f4d9654725ce23ae3beaff417 426 SUPERFAMILY SSF50630 156 272 1.06E-10 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily TDE_1829 794f192f4d9654725ce23ae3beaff417 426 Gene3D G3DSA:2.40.70.10 139 286 1.2E-14 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily TDE_1829 794f192f4d9654725ce23ae3beaff417 426 Pfam PF13650 Aspartyl protease 166 262 9.1E-8 T 12-10-2018 TDE_1829 794f192f4d9654725ce23ae3beaff417 426 Pfam PF13650 Aspartyl protease 312 407 4.1E-10 T 12-10-2018 TDE_1829 794f192f4d9654725ce23ae3beaff417 426 Gene3D G3DSA:2.40.70.10 293 424 2.9E-12 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily TDE_1829 794f192f4d9654725ce23ae3beaff417 426 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 177 188 - T 12-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 TDE_1829 794f192f4d9654725ce23ae3beaff417 426 SUPERFAMILY SSF50630 303 411 2.09E-12 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily TDE_0163 77c41cb8dee79ff53852cbec67a36f1d 145 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 TDE_0163 77c41cb8dee79ff53852cbec67a36f1d 145 SUPERFAMILY SSF52218 3 145 5.35E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0163 77c41cb8dee79ff53852cbec67a36f1d 145 Pfam PF00258 Flavodoxin 6 138 8.8E-18 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 TDE_0163 77c41cb8dee79ff53852cbec67a36f1d 145 TIGRFAM TIGR01753 flav_short: flavodoxin 4 144 5.8E-46 T 12-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 TDE_0163 77c41cb8dee79ff53852cbec67a36f1d 145 Gene3D G3DSA:3.40.50.360 4 145 6.3E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0062 d718d3813b6bd8f3c02613501b031709 163 Gene3D G3DSA:3.40.930.10 7 163 1.5E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TDE_0062 d718d3813b6bd8f3c02613501b031709 163 SUPERFAMILY SSF55804 13 159 1.07E-34 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TDE_0062 d718d3813b6bd8f3c02613501b031709 163 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 17 159 9.0E-33 T 12-10-2018 IPR002178 PTS EIIA type-2 domain TDE_1578 15c0c71425bdd900acbb2476140da753 219 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 28 210 1.7E-25 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 TDE_1578 15c0c71425bdd900acbb2476140da753 219 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 28 208 1.1E-24 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 TDE_1578 15c0c71425bdd900acbb2476140da753 219 SUPERFAMILY SSF56300 28 209 5.43E-34 T 12-10-2018 TDE_1578 15c0c71425bdd900acbb2476140da753 219 Gene3D G3DSA:3.60.21.10 22 219 4.5E-36 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like TDE_0334 ae7722f93cfcdfd47a0cd20776d204ae 250 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 62 8.5E-5 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal TDE_1215 f65255493bdafc13b6eca7e17120707d 567 Pfam PF01514 Secretory protein of YscJ/FliF family 31 224 1.9E-36 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF TDE_1215 f65255493bdafc13b6eca7e17120707d 567 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 566 1.1E-102 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TDE_1215 f65255493bdafc13b6eca7e17120707d 567 Pfam PF08345 Flagellar M-ring protein C-terminal 260 448 4.0E-21 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal TDE_1215 f65255493bdafc13b6eca7e17120707d 567 PRINTS PR01009 Flagellar M-ring protein signature 123 141 2.7E-8 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TDE_1215 f65255493bdafc13b6eca7e17120707d 567 PRINTS PR01009 Flagellar M-ring protein signature 155 169 2.7E-8 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TDE_1215 f65255493bdafc13b6eca7e17120707d 567 PRINTS PR01009 Flagellar M-ring protein signature 274 292 2.7E-8 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TDE_1215 f65255493bdafc13b6eca7e17120707d 567 PRINTS PR01009 Flagellar M-ring protein signature 200 218 2.7E-8 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TDE_1215 f65255493bdafc13b6eca7e17120707d 567 Gene3D G3DSA:3.30.300.30 125 221 5.0E-5 T 12-10-2018 TDE_2723 18005e5440e9f18a134bb6ef2c7ca560 418 SUPERFAMILY SSF53271 239 400 5.51E-32 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like TDE_2723 18005e5440e9f18a134bb6ef2c7ca560 418 Pfam PF00156 Phosphoribosyl transferase domain 212 338 6.0E-25 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TDE_2723 18005e5440e9f18a134bb6ef2c7ca560 418 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 82 401 1.3E-100 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TDE_2723 18005e5440e9f18a134bb6ef2c7ca560 418 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 85 188 2.2E-23 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TDE_2723 18005e5440e9f18a134bb6ef2c7ca560 418 Gene3D G3DSA:3.40.50.2020 231 376 8.0E-32 T 12-10-2018 TDE_2723 18005e5440e9f18a134bb6ef2c7ca560 418 Gene3D G3DSA:3.40.50.2020 72 230 4.6E-39 T 12-10-2018 TDE_2723 18005e5440e9f18a134bb6ef2c7ca560 418 SUPERFAMILY SSF53271 87 230 1.09E-27 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like TDE_2723 18005e5440e9f18a134bb6ef2c7ca560 418 SMART SM01400 9 184 9.9E-10 T 12-10-2018 TDE_0259 54b3396cb9eeb6b3a05577fb3f0eab99 150 Gene3D G3DSA:1.10.10.10 1 144 7.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0259 54b3396cb9eeb6b3a05577fb3f0eab99 150 SMART SM00347 27 130 1.3E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_0259 54b3396cb9eeb6b3a05577fb3f0eab99 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.2E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_0259 54b3396cb9eeb6b3a05577fb3f0eab99 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 2.2E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_0259 54b3396cb9eeb6b3a05577fb3f0eab99 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.2E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_0259 54b3396cb9eeb6b3a05577fb3f0eab99 150 SUPERFAMILY SSF46785 27 146 1.23E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0259 54b3396cb9eeb6b3a05577fb3f0eab99 150 Pfam PF01047 MarR family 36 92 1.8E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_2087 91eeb0dfc4388ae03979261f65583e88 72 Gene3D G3DSA:2.40.50.140 2 70 1.5E-35 T 12-10-2018 TDE_2087 91eeb0dfc4388ae03979261f65583e88 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.8E-35 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TDE_2087 91eeb0dfc4388ae03979261f65583e88 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.9E-27 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 TDE_2087 91eeb0dfc4388ae03979261f65583e88 72 SMART SM00316 4 72 7.4E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 TDE_2087 91eeb0dfc4388ae03979261f65583e88 72 SUPERFAMILY SSF50249 2 70 8.92E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold TDE_2087 91eeb0dfc4388ae03979261f65583e88 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.187 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TDE_1767 86ed5413a2241aae0591f13a81fac01e 213 Pfam PF00912 Transglycosylase 143 207 8.6E-7 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1767 86ed5413a2241aae0591f13a81fac01e 213 Gene3D G3DSA:1.10.3810.10 96 213 5.5E-6 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1767 86ed5413a2241aae0591f13a81fac01e 213 SUPERFAMILY SSF53955 120 200 1.38E-7 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily TDE_1353 8e034dccd1cc62f821516bdb2dbdc93f 433 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 432 6.2E-124 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1353 8e034dccd1cc62f821516bdb2dbdc93f 433 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 433 25.312 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1353 8e034dccd1cc62f821516bdb2dbdc93f 433 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 390 414 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1353 8e034dccd1cc62f821516bdb2dbdc93f 433 Pfam PF01098 Cell cycle protein 12 197 1.1E-33 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1353 8e034dccd1cc62f821516bdb2dbdc93f 433 Pfam PF01098 Cell cycle protein 221 429 3.9E-56 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TDE_1169 2b70c3576fcf55ddc2db27785c785564 81 Pfam PF12728 Helix-turn-helix domain 3 52 6.8E-10 T 12-10-2018 TDE_1169 2b70c3576fcf55ddc2db27785c785564 81 SUPERFAMILY SSF46955 1 52 2.93E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily TDE_0797 3b733ea413c4b58d2e8d3f61e5d74732 94 Pfam PF00708 Acylphosphatase 10 92 7.6E-25 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TDE_0797 3b733ea413c4b58d2e8d3f61e5d74732 94 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TDE_0797 3b733ea413c4b58d2e8d3f61e5d74732 94 Gene3D G3DSA:3.30.70.100 1 93 3.3E-27 T 12-10-2018 TDE_0797 3b733ea413c4b58d2e8d3f61e5d74732 94 SUPERFAMILY SSF54975 4 92 4.58E-26 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TDE_1844 3af4fe999aef4ce21f12b64d4dc0087a 335 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 20 101 9.2E-21 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TDE_1844 3af4fe999aef4ce21f12b64d4dc0087a 335 TIGRFAM TIGR02249 integrase_gron: integron integrase 20 335 2.3E-153 T 12-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 TDE_1844 3af4fe999aef4ce21f12b64d4dc0087a 335 Gene3D G3DSA:1.10.150.130 17 105 7.5E-25 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal TDE_1844 3af4fe999aef4ce21f12b64d4dc0087a 335 Gene3D G3DSA:1.10.443.10 110 324 1.3E-60 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TDE_1844 3af4fe999aef4ce21f12b64d4dc0087a 335 SUPERFAMILY SSF56349 25 321 7.65E-46 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TDE_1844 3af4fe999aef4ce21f12b64d4dc0087a 335 Pfam PF00589 Phage integrase family 121 321 1.1E-37 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TDE_0243 1539e0b84063ea642474067ab37e66e4 491 SUPERFAMILY SSF52540 254 472 5.86E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0243 1539e0b84063ea642474067ab37e66e4 491 Gene3D G3DSA:3.40.50.300 261 490 3.3E-52 T 12-10-2018 TDE_0243 1539e0b84063ea642474067ab37e66e4 491 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0243 1539e0b84063ea642474067ab37e66e4 491 Pfam PF00005 ABC transporter 18 169 3.0E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0243 1539e0b84063ea642474067ab37e66e4 491 SUPERFAMILY SSF52540 2 232 2.72E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0243 1539e0b84063ea642474067ab37e66e4 491 Pfam PF00005 ABC transporter 279 418 9.1E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0243 1539e0b84063ea642474067ab37e66e4 491 Gene3D G3DSA:3.40.50.300 1 253 1.2E-58 T 12-10-2018 TDE_0243 1539e0b84063ea642474067ab37e66e4 491 SMART SM00382 27 217 4.1E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0243 1539e0b84063ea642474067ab37e66e4 491 SMART SM00382 288 465 1.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0074 e66935674cbdd645634297a469c9344f 447 Gene3D G3DSA:1.20.1740.10 3 447 1.4E-65 T 12-10-2018 TDE_0074 e66935674cbdd645634297a469c9344f 447 PIRSF PIRSF006060 1 447 1.3E-73 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TDE_0074 e66935674cbdd645634297a469c9344f 447 Pfam PF13520 Amino acid permease 10 418 3.7E-36 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TDE_0483 b61c6056bf070079eaea96be90e5b5ca 266 Pfam PF06541 Putative ABC-transporter type IV 8 162 3.6E-47 T 12-10-2018 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 TDE_1510 5d7966c9603fb11109774d0388940770 422 Pfam PF03239 Iron permease FTR1 family 41 324 3.2E-45 T 12-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 TDE_2599 1206d7785ee7fc38165dcb07386d716a 209 SUPERFAMILY SSF52540 5 206 9.04E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2599 1206d7785ee7fc38165dcb07386d716a 209 Pfam PF02223 Thymidylate kinase 9 198 1.6E-41 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 TDE_2599 1206d7785ee7fc38165dcb07386d716a 209 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 20.233 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TDE_2599 1206d7785ee7fc38165dcb07386d716a 209 Gene3D G3DSA:3.40.50.300 5 208 1.3E-47 T 12-10-2018 TDE_2599 1206d7785ee7fc38165dcb07386d716a 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 198 4.9E-42 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TDE_1949 e06eed478eeca0c932107a186e54d90b 507 SUPERFAMILY SSF52540 255 491 2.92E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1949 e06eed478eeca0c932107a186e54d90b 507 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_1949 e06eed478eeca0c932107a186e54d90b 507 Pfam PF00005 ABC transporter 275 431 4.7E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1949 e06eed478eeca0c932107a186e54d90b 507 SUPERFAMILY SSF52540 6 228 2.06E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1949 e06eed478eeca0c932107a186e54d90b 507 SMART SM00382 32 226 9.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1949 e06eed478eeca0c932107a186e54d90b 507 Gene3D G3DSA:3.40.50.300 3 239 2.3E-57 T 12-10-2018 TDE_1949 e06eed478eeca0c932107a186e54d90b 507 Gene3D G3DSA:3.40.50.300 253 498 4.3E-43 T 12-10-2018 TDE_1949 e06eed478eeca0c932107a186e54d90b 507 Pfam PF00005 ABC transporter 24 170 1.6E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2275 c64e77fe2251f9f6d3473f0cf8e3c494 268 Gene3D G3DSA:3.30.70.660 118 255 5.9E-36 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 TDE_2275 c64e77fe2251f9f6d3473f0cf8e3c494 268 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 9 251 5.8E-51 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2275 c64e77fe2251f9f6d3473f0cf8e3c494 268 Pfam PF01416 tRNA pseudouridine synthase 157 257 2.1E-18 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2275 c64e77fe2251f9f6d3473f0cf8e3c494 268 Pfam PF01416 tRNA pseudouridine synthase 15 116 5.1E-10 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2275 c64e77fe2251f9f6d3473f0cf8e3c494 268 SUPERFAMILY SSF55120 7 261 8.63E-74 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2275 c64e77fe2251f9f6d3473f0cf8e3c494 268 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 8 256 30.763 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_2275 c64e77fe2251f9f6d3473f0cf8e3c494 268 Gene3D G3DSA:3.30.70.580 5 117 9.0E-33 T 12-10-2018 TDE_2275 c64e77fe2251f9f6d3473f0cf8e3c494 268 PIRSF PIRSF001430 7 267 5.4E-72 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TDE_0984 56a9e6409cd54e733cefd31d72b95c77 499 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 312 493 4.2E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0984 56a9e6409cd54e733cefd31d72b95c77 499 Gene3D G3DSA:1.10.3720.10 286 490 1.4E-12 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0984 56a9e6409cd54e733cefd31d72b95c77 499 SUPERFAMILY SSF161098 299 477 4.97E-15 T 12-10-2018 IPR035906 MetI-like superfamily TDE_2387 fc321671bbbe5ffaa7b1aa1a4d6399ef 540 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 2 539 4.4E-110 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TDE_2387 fc321671bbbe5ffaa7b1aa1a4d6399ef 540 Gene3D G3DSA:3.20.20.80 1 540 1.7E-176 T 12-10-2018 TDE_2387 fc321671bbbe5ffaa7b1aa1a4d6399ef 540 SUPERFAMILY SSF51445 2 539 1.46E-156 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_2387 fc321671bbbe5ffaa7b1aa1a4d6399ef 540 Pfam PF02446 4-alpha-glucanotransferase 9 518 5.5E-147 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TDE_1502 96152d94aa64de052e3af4836d940751 125 PIRSF PIRSF005965 5 125 1.7E-37 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TDE_1502 96152d94aa64de052e3af4836d940751 125 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 17 119 3.0E-55 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TDE_1502 96152d94aa64de052e3af4836d940751 125 SUPERFAMILY SSF55298 7 123 2.59E-34 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TDE_1502 96152d94aa64de052e3af4836d940751 125 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 7 119 1.7E-24 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TDE_1502 96152d94aa64de052e3af4836d940751 125 Gene3D G3DSA:3.30.1330.40 5 125 1.1E-36 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TDE_1502 96152d94aa64de052e3af4836d940751 125 Pfam PF07736 Chorismate mutase type I 8 119 3.9E-33 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TDE_0440 0761d4a97d63c5777a20ece127d9fb68 91 Gene3D G3DSA:1.10.260.40 4 76 6.6E-22 T 12-10-2018 TDE_0440 0761d4a97d63c5777a20ece127d9fb68 91 SUPERFAMILY SSF47413 8 74 2.17E-20 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_0440 0761d4a97d63c5777a20ece127d9fb68 91 Pfam PF01381 Helix-turn-helix 14 67 2.7E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_0440 0761d4a97d63c5777a20ece127d9fb68 91 SMART SM00530 13 68 1.2E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1941 8faa2f8e3f803d82527b54ec50671e39 926 SUPERFAMILY SSF69318 852 916 4.05E-8 T 12-10-2018 TDE_1941 8faa2f8e3f803d82527b54ec50671e39 926 SUPERFAMILY SSF101898 612 921 1.7E-5 T 12-10-2018 TDE_1038 f74de2390fa8974b175342da9f4c0fe9 523 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 173 7.6E-20 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TDE_1038 f74de2390fa8974b175342da9f4c0fe9 523 Gene3D G3DSA:3.40.50.720 1 313 3.7E-35 T 12-10-2018 TDE_1038 f74de2390fa8974b175342da9f4c0fe9 523 SUPERFAMILY SSF51735 1 311 8.82E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_2679 401cd18da6873e7475e6b06cf4102dfc 294 Pfam PF14257 Domain of unknown function (DUF4349) 20 279 1.6E-65 T 12-10-2018 IPR025645 Domain of unknown function DUF4349 TDE_2056 784268dba753b215285191aa45bcb39e 403 Gene3D G3DSA:2.40.128.20 238 389 1.5E-6 T 12-10-2018 IPR012674 Calycin TDE_2056 784268dba753b215285191aa45bcb39e 403 Gene3D G3DSA:2.40.128.20 23 206 2.0E-16 T 12-10-2018 IPR012674 Calycin TDE_2056 784268dba753b215285191aa45bcb39e 403 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 38 203 2.0E-11 T 12-10-2018 IPR015304 ZinT domain GO:0008270 TDE_2056 784268dba753b215285191aa45bcb39e 403 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 285 386 1.0E-5 T 12-10-2018 IPR015304 ZinT domain GO:0008270 TDE_2056 784268dba753b215285191aa45bcb39e 403 SUPERFAMILY SSF50814 17 207 5.14E-49 T 12-10-2018 IPR012674 Calycin TDE_0208 ca19447a8153a86e253c1c1e1b0d4814 388 Pfam PF02595 Glycerate kinase family 4 382 3.9E-133 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 TDE_0208 ca19447a8153a86e253c1c1e1b0d4814 388 Gene3D G3DSA:3.90.1510.10 43 285 2.8E-127 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 TDE_0208 ca19447a8153a86e253c1c1e1b0d4814 388 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 382 4.0E-126 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 TDE_0208 ca19447a8153a86e253c1c1e1b0d4814 388 SUPERFAMILY SSF110738 3 382 4.58E-119 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 TDE_0208 ca19447a8153a86e253c1c1e1b0d4814 388 Gene3D G3DSA:3.40.50.10350 3 371 2.8E-127 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold TDE_0208 ca19447a8153a86e253c1c1e1b0d4814 388 PIRSF PIRSF006078 2 385 9.5E-130 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 TDE_1971 c187e068f44c17b3e633e076da6bb920 429 SUPERFAMILY SSF52540 14 293 2.57E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1971 c187e068f44c17b3e633e076da6bb920 429 Pfam PF13177 DNA polymerase III, delta subunit 14 258 5.9E-36 T 12-10-2018 TDE_0177 1ddc94d4ea331dde0fc7d9fa6f2558a9 224 Pfam PF06149 Protein of unknown function (DUF969) 3 216 4.1E-84 T 12-10-2018 IPR010374 Protein of unknown function DUF969 TDE_1174 38bed59a0461822b7acc03271eec62ee 249 Gene3D G3DSA:3.30.70.1230 40 225 3.4E-9 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_1174 38bed59a0461822b7acc03271eec62ee 249 SUPERFAMILY SSF55073 41 196 2.51E-11 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0712 60bce607329cdbb71316edfe6fcab312 260 Pfam PF06738 Putative threonine/serine exporter 16 251 1.8E-69 T 12-10-2018 IPR010619 Putative threonine/serine exporter TDE_2069 5b1b6b795f98039d7ad473374739a765 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 124 1.2E-51 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 TDE_2069 5b1b6b795f98039d7ad473374739a765 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 TDE_2069 5b1b6b795f98039d7ad473374739a765 125 Pfam PF01042 Endoribonuclease L-PSP 8 124 3.6E-44 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 TDE_2069 5b1b6b795f98039d7ad473374739a765 125 Gene3D G3DSA:3.30.1330.40 1 125 5.8E-52 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TDE_2069 5b1b6b795f98039d7ad473374739a765 125 SUPERFAMILY SSF55298 1 124 5.81E-47 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TDE_1439 87c212156d1f587ab48f6eda79896bf4 329 Gene3D G3DSA:3.40.50.720 2 316 6.4E-49 T 12-10-2018 TDE_1439 87c212156d1f587ab48f6eda79896bf4 329 SUPERFAMILY SSF51735 1 315 3.48E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_1439 87c212156d1f587ab48f6eda79896bf4 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 218 5.9E-29 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TDE_2032 af7328874cccf9a3f8eb8c86264eac65 332 SUPERFAMILY SSF69917 27 328 9.68E-18 T 12-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 TDE_2032 af7328874cccf9a3f8eb8c86264eac65 332 Pfam PF01278 Omptin family 28 328 6.2E-20 T 12-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 TDE_2032 af7328874cccf9a3f8eb8c86264eac65 332 Gene3D G3DSA:2.40.128.90 19 329 4.5E-32 T 12-10-2018 TDE_2685 8656b6a6d1e75be1138b7300f9f24d1b 295 SUPERFAMILY SSF52540 32 276 3.06E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2685 8656b6a6d1e75be1138b7300f9f24d1b 295 PIRSF PIRSF003092 1 295 1.0E-81 T 12-10-2018 IPR025501 ATP binding protein MinD TDE_2685 8656b6a6d1e75be1138b7300f9f24d1b 295 Gene3D G3DSA:3.40.50.300 32 274 6.9E-58 T 12-10-2018 TDE_2685 8656b6a6d1e75be1138b7300f9f24d1b 295 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 35 252 4.5E-21 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TDE_0148 276c5349df6ffca28169bf8ebf285667 289 SUPERFAMILY SSF55874 170 277 4.45E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0148 276c5349df6ffca28169bf8ebf285667 289 Pfam PF07730 Histidine kinase 92 154 2.4E-10 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 TDE_0148 276c5349df6ffca28169bf8ebf285667 289 SMART SM00387 187 280 7.7E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0148 276c5349df6ffca28169bf8ebf285667 289 Gene3D G3DSA:3.30.565.10 156 280 3.3E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0148 276c5349df6ffca28169bf8ebf285667 289 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 193 279 2.9E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0643 6ad55a1c0a95d2a07827026067840ad5 203 Pfam PF01195 Peptidyl-tRNA hydrolase 4 185 7.4E-47 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TDE_0643 6ad55a1c0a95d2a07827026067840ad5 203 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 188 30.457 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TDE_0643 6ad55a1c0a95d2a07827026067840ad5 203 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TDE_0643 6ad55a1c0a95d2a07827026067840ad5 203 SUPERFAMILY SSF53178 2 185 7.59E-51 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TDE_0643 6ad55a1c0a95d2a07827026067840ad5 203 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 181 1.5E-47 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TDE_0643 6ad55a1c0a95d2a07827026067840ad5 203 Gene3D G3DSA:3.40.50.1470 1 197 1.3E-55 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TDE_1064 d7f66bc9a2f0ab3409d9db10232b0be0 211 Pfam PF02525 Flavodoxin-like fold 1 73 2.5E-5 T 12-10-2018 IPR003680 Flavodoxin-like fold TDE_1064 d7f66bc9a2f0ab3409d9db10232b0be0 211 Gene3D G3DSA:3.40.50.360 1 199 7.7E-9 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_1064 d7f66bc9a2f0ab3409d9db10232b0be0 211 SUPERFAMILY SSF52218 1 133 1.66E-13 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_1039 0ad9773530f4fcaadbeeac1c47e120c6 287 Gene3D G3DSA:3.40.50.620 19 199 4.8E-38 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TDE_1039 0ad9773530f4fcaadbeeac1c47e120c6 287 SUPERFAMILY SSF52374 31 188 6.88E-23 T 12-10-2018 TDE_1039 0ad9773530f4fcaadbeeac1c47e120c6 287 Pfam PF06574 FAD synthetase 30 179 4.6E-32 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TDE_2741 b36b9ece30467cbb346226b54a8f52cb 259 SUPERFAMILY SSF48452 40 144 3.56E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2741 b36b9ece30467cbb346226b54a8f52cb 259 Pfam PF14559 Tetratricopeptide repeat 123 169 1.4E-5 T 12-10-2018 TDE_2741 b36b9ece30467cbb346226b54a8f52cb 259 Gene3D G3DSA:1.25.40.10 35 236 2.3E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2247 5efcdd0ba364632d55f6151acb959f5e 109 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 6 107 5.2E-29 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TDE_2247 5efcdd0ba364632d55f6151acb959f5e 109 Gene3D G3DSA:2.30.30.110 2 108 1.4E-31 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TDE_2247 5efcdd0ba364632d55f6151acb959f5e 109 SUPERFAMILY SSF50118 1 107 1.29E-34 T 12-10-2018 TDE_2247 5efcdd0ba364632d55f6151acb959f5e 109 PIRSF PIRSF033490 3 108 1.1E-24 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TDE_0067 911c89541864824d6bccdcb236a75306 415 SUPERFAMILY SSF46785 315 390 1.41E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0067 911c89541864824d6bccdcb236a75306 415 SUPERFAMILY SSF51206 196 306 1.44E-26 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_0067 911c89541864824d6bccdcb236a75306 415 SUPERFAMILY SSF51206 4 120 1.83E-19 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like TDE_0067 911c89541864824d6bccdcb236a75306 415 SMART SM00100 179 296 2.0E-11 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_0067 911c89541864824d6bccdcb236a75306 415 SMART SM00100 1 107 0.99 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_0067 911c89541864824d6bccdcb236a75306 415 Gene3D G3DSA:1.10.10.10 314 406 7.4E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0067 911c89541864824d6bccdcb236a75306 415 Pfam PF00027 Cyclic nucleotide-binding domain 197 283 1.0E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_0067 911c89541864824d6bccdcb236a75306 415 Pfam PF00027 Cyclic nucleotide-binding domain 8 95 2.8E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain TDE_0067 911c89541864824d6bccdcb236a75306 415 Gene3D G3DSA:2.60.120.10 1 123 3.4E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_0067 911c89541864824d6bccdcb236a75306 415 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 245 262 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TDE_0067 911c89541864824d6bccdcb236a75306 415 Gene3D G3DSA:2.60.120.10 191 309 8.5E-28 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_0055 43adaa17705796aa89fefa950772d2cd 698 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 12 693 1.4E-270 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 Gene3D G3DSA:1.10.490.80 594 693 2.3E-6 T 12-10-2018 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 234 248 1.2E-42 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 29 42 1.2E-42 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 134 150 1.2E-42 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 200 1.2E-42 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 66 85 1.2E-42 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 171 1.2E-42 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 Gene3D G3DSA:3.40.30.60 359 501 9.8E-51 T 12-10-2018 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 Gene3D G3DSA:1.10.8.540 502 591 9.6E-22 T 12-10-2018 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 Pfam PF00771 FHIPEP family 22 685 3.8E-228 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TDE_0055 43adaa17705796aa89fefa950772d2cd 698 PIRSF PIRSF005419 1 698 4.2E-221 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TDE_0052 89a2074f846e192060e4da8c147776a0 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.1E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TDE_0052 89a2074f846e192060e4da8c147776a0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.9E-22 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TDE_0052 89a2074f846e192060e4da8c147776a0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.9E-22 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TDE_0052 89a2074f846e192060e4da8c147776a0 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.9E-22 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TDE_0052 89a2074f846e192060e4da8c147776a0 89 PIRSF PIRSF004669 1 89 2.5E-28 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TDE_0052 89a2074f846e192060e4da8c147776a0 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.1E-29 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 TDE_1294 91033cbbc5dd72d3b66f8b360a5bd847 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 8.9E-15 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like TDE_1294 91033cbbc5dd72d3b66f8b360a5bd847 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 8.9E-15 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like TDE_1294 91033cbbc5dd72d3b66f8b360a5bd847 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 8.9E-15 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like TDE_1294 91033cbbc5dd72d3b66f8b360a5bd847 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site TDE_1294 91033cbbc5dd72d3b66f8b360a5bd847 88 SUPERFAMILY SSF55594 1 87 1.27E-25 T 12-10-2018 IPR035895 HPr-like superfamily TDE_1294 91033cbbc5dd72d3b66f8b360a5bd847 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 3.7E-32 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like TDE_1294 91033cbbc5dd72d3b66f8b360a5bd847 88 Gene3D G3DSA:3.30.1340.10 1 88 6.3E-29 T 12-10-2018 IPR035895 HPr-like superfamily TDE_1294 91033cbbc5dd72d3b66f8b360a5bd847 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.2E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like TDE_1540 d0b49f3c4b851bb75ae14949a88d530e 148 Pfam PF03692 Putative zinc- or iron-chelating domain 14 117 1.9E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein TDE_1223 197d406981516c992df4515087dd7d89 366 Pfam PF00950 ABC 3 transport family 5 271 7.0E-49 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TDE_1223 197d406981516c992df4515087dd7d89 366 SUPERFAMILY SSF81345 6 267 1.24E-26 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_0623 57a020812a839b0da5fa1a9198f5cacc 240 SUPERFAMILY SSF53790 3 237 9.68E-54 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TDE_0623 57a020812a839b0da5fa1a9198f5cacc 240 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 4 238 4.3E-91 T 12-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 TDE_0623 57a020812a839b0da5fa1a9198f5cacc 240 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 206 1.8E-37 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TDE_0623 57a020812a839b0da5fa1a9198f5cacc 240 Gene3D G3DSA:3.30.950.10 109 239 4.2E-53 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TDE_0623 57a020812a839b0da5fa1a9198f5cacc 240 Gene3D G3DSA:3.40.1010.10 1 108 4.8E-28 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TDE_0113 e2570c1264754473bd999450f85e3cfb 304 Pfam PF04468 PSP1 C-terminal conserved region 94 178 1.3E-21 T 12-10-2018 IPR007557 PSP1, C-terminal TDE_1925 3d9888e285601831cb96501fa38fdc68 181 SUPERFAMILY SSF54534 2 140 7.46E-34 T 12-10-2018 TDE_1925 3d9888e285601831cb96501fa38fdc68 181 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 137 3.7E-12 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TDE_1925 3d9888e285601831cb96501fa38fdc68 181 Gene3D G3DSA:3.10.50.40 3 149 2.9E-51 T 12-10-2018 TDE_1925 3d9888e285601831cb96501fa38fdc68 181 Gene3D G3DSA:2.40.10.330 71 121 2.9E-51 T 12-10-2018 TDE_1097 a1e7d6b2fa27586af3ff7b742e595b2d 284 SUPERFAMILY SSF55729 13 117 1.55E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_1097 a1e7d6b2fa27586af3ff7b742e595b2d 284 Pfam PF13673 Acetyltransferase (GNAT) domain 17 114 1.2E-7 T 12-10-2018 IPR000182 GNAT domain TDE_1097 a1e7d6b2fa27586af3ff7b742e595b2d 284 Gene3D G3DSA:3.40.630.30 3 130 1.4E-12 T 12-10-2018 TDE_0364 98bd597785bdcf83d35101b8ffab8c9e 518 Gene3D G3DSA:3.40.50.300 303 518 2.3E-41 T 12-10-2018 TDE_0364 98bd597785bdcf83d35101b8ffab8c9e 518 Gene3D G3DSA:1.20.1560.10 1 302 2.4E-14 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0364 98bd597785bdcf83d35101b8ffab8c9e 518 SUPERFAMILY SSF90123 3 282 5.89E-23 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0364 98bd597785bdcf83d35101b8ffab8c9e 518 SUPERFAMILY SSF52540 337 517 2.04E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0364 98bd597785bdcf83d35101b8ffab8c9e 518 ProSitePatterns PS00211 ABC transporters family signature. 447 461 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0364 98bd597785bdcf83d35101b8ffab8c9e 518 SMART SM00382 340 518 0.0057 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0364 98bd597785bdcf83d35101b8ffab8c9e 518 Pfam PF00005 ABC transporter 334 475 4.3E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1912 7e5743b1e1ba25f5b3c49b5095d4488a 210 Pfam PF02629 CoA binding domain 82 179 2.9E-24 T 12-10-2018 IPR003781 CoA-binding GO:0048037 TDE_1912 7e5743b1e1ba25f5b3c49b5095d4488a 210 SUPERFAMILY SSF46785 11 80 2.34E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_1912 7e5743b1e1ba25f5b3c49b5095d4488a 210 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 210 29.117 T 12-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 TDE_1912 7e5743b1e1ba25f5b3c49b5095d4488a 210 Gene3D G3DSA:3.40.50.720 80 210 1.8E-43 T 12-10-2018 TDE_1912 7e5743b1e1ba25f5b3c49b5095d4488a 210 Gene3D G3DSA:1.10.10.10 1 79 1.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1912 7e5743b1e1ba25f5b3c49b5095d4488a 210 SMART SM00881 80 181 1.5E-18 T 12-10-2018 IPR003781 CoA-binding GO:0048037 TDE_1912 7e5743b1e1ba25f5b3c49b5095d4488a 210 Pfam PF06971 Putative DNA-binding protein N-terminus 9 53 3.3E-14 T 12-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 TDE_1912 7e5743b1e1ba25f5b3c49b5095d4488a 210 SUPERFAMILY SSF51735 82 207 3.05E-24 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_0192 5bc8b2fd3ab950cdab334b30c7859e4a 254 Gene3D G3DSA:3.40.50.1820 8 254 1.3E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0192 5bc8b2fd3ab950cdab334b30c7859e4a 254 Pfam PF00326 Prolyl oligopeptidase family 106 238 9.3E-12 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TDE_0192 5bc8b2fd3ab950cdab334b30c7859e4a 254 SUPERFAMILY SSF53474 19 254 4.32E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2318 f91c3ab34590ca33bc762a2802eb304f 307 SMART SM00257 70 114 6.5E-12 T 12-10-2018 IPR018392 LysM domain TDE_2318 f91c3ab34590ca33bc762a2802eb304f 307 SMART SM00257 120 164 1.2E-7 T 12-10-2018 IPR018392 LysM domain TDE_2318 f91c3ab34590ca33bc762a2802eb304f 307 Gene3D G3DSA:2.70.70.10 169 307 1.8E-44 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_2318 f91c3ab34590ca33bc762a2802eb304f 307 Gene3D G3DSA:3.10.350.10 64 116 6.6E-14 T 12-10-2018 IPR036779 LysM domain superfamily TDE_2318 f91c3ab34590ca33bc762a2802eb304f 307 Pfam PF01551 Peptidase family M23 208 302 1.4E-29 T 12-10-2018 IPR016047 Peptidase M23 TDE_2318 f91c3ab34590ca33bc762a2802eb304f 307 Gene3D G3DSA:3.10.350.10 117 168 7.1E-9 T 12-10-2018 IPR036779 LysM domain superfamily TDE_2318 f91c3ab34590ca33bc762a2802eb304f 307 Pfam PF01476 LysM domain 121 164 2.5E-7 T 12-10-2018 IPR018392 LysM domain TDE_2318 f91c3ab34590ca33bc762a2802eb304f 307 Pfam PF01476 LysM domain 71 114 9.3E-13 T 12-10-2018 IPR018392 LysM domain TDE_2318 f91c3ab34590ca33bc762a2802eb304f 307 SUPERFAMILY SSF51261 70 303 1.26E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_0499 03b9e3e90764c49a1c33851fb1e256d5 326 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 98 313 4.2E-42 T 12-10-2018 IPR005079 Peptidase C45 TDE_0499 03b9e3e90764c49a1c33851fb1e256d5 326 Gene3D G3DSA:3.60.60.10 82 324 2.7E-36 T 12-10-2018 TDE_0499 03b9e3e90764c49a1c33851fb1e256d5 326 SUPERFAMILY SSF56235 90 319 4.71E-15 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TDE_0987 a4bcc4eef80efb4798bfc67df7d9f3a2 318 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0987 a4bcc4eef80efb4798bfc67df7d9f3a2 318 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 297 8.0E-15 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0987 a4bcc4eef80efb4798bfc67df7d9f3a2 318 SMART SM00382 38 230 5.3E-21 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0987 a4bcc4eef80efb4798bfc67df7d9f3a2 318 Pfam PF00005 ABC transporter 29 180 4.4E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0987 a4bcc4eef80efb4798bfc67df7d9f3a2 318 SUPERFAMILY SSF52540 7 252 2.49E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0987 a4bcc4eef80efb4798bfc67df7d9f3a2 318 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 4.1E-24 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0987 a4bcc4eef80efb4798bfc67df7d9f3a2 318 Gene3D G3DSA:3.40.50.300 5 318 3.0E-96 T 12-10-2018 TDE_0136 04ff4d90ab2f9c2b5deef25cf5664201 118 Pfam PF07892 Protein of unknown function (DUF1667) 34 113 1.3E-20 T 12-10-2018 IPR012460 Protein of unknown function DUF1667 TDE_0136 04ff4d90ab2f9c2b5deef25cf5664201 118 SUPERFAMILY SSF160148 46 114 1.07E-14 T 12-10-2018 IPR036593 CPE0013-like superfamily TDE_0136 04ff4d90ab2f9c2b5deef25cf5664201 118 Gene3D G3DSA:3.10.530.10 47 114 1.0E-11 T 12-10-2018 IPR036593 CPE0013-like superfamily TDE_0503 927507706621a4a5822223fac74d4811 283 Pfam PF10020 Uncharacterized protein conserved in bacteria (DUF2262) 143 281 8.2E-47 T 12-10-2018 IPR019260 Domain of unknown function DUF2262 TDE_0503 927507706621a4a5822223fac74d4811 283 PIRSF PIRSF033642 1 283 1.1E-117 T 12-10-2018 IPR024198 Uncharacterised conserved protein, UCP033642 TDE_0704 009517b5aa03170d2cb42eb27828f4c5 305 Gene3D G3DSA:3.30.479.30 52 184 8.1E-42 T 12-10-2018 TDE_0704 009517b5aa03170d2cb42eb27828f4c5 305 PRINTS PR00721 Stomatin signature 79 100 1.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0704 009517b5aa03170d2cb42eb27828f4c5 305 PRINTS PR00721 Stomatin signature 158 176 1.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0704 009517b5aa03170d2cb42eb27828f4c5 305 PRINTS PR00721 Stomatin signature 177 198 1.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0704 009517b5aa03170d2cb42eb27828f4c5 305 PRINTS PR00721 Stomatin signature 114 131 1.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0704 009517b5aa03170d2cb42eb27828f4c5 305 PRINTS PR00721 Stomatin signature 134 157 1.2E-27 T 12-10-2018 IPR001972 Stomatin family GO:0016020 TDE_0704 009517b5aa03170d2cb42eb27828f4c5 305 SMART SM00244 24 182 4.6E-59 T 12-10-2018 IPR001107 Band 7 domain TDE_0704 009517b5aa03170d2cb42eb27828f4c5 305 SUPERFAMILY SSF117892 55 189 9.02E-42 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily TDE_0704 009517b5aa03170d2cb42eb27828f4c5 305 Pfam PF01145 SPFH domain / Band 7 family 28 195 7.4E-28 T 12-10-2018 IPR001107 Band 7 domain TDE_2700 62618236ce9d0e61ef9ca89c2a659467 430 Pfam PF03390 2-hydroxycarboxylate transporter family 10 422 1.5E-155 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 TDE_2700 62618236ce9d0e61ef9ca89c2a659467 430 PIRSF PIRSF005348 1 428 1.1E-165 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 TDE_0939 45f1836a2badc168f9b68daf71172aa6 311 Pfam PF01963 TraB family 49 309 3.0E-49 T 12-10-2018 IPR002816 Pheromone shutdown, TraB TDE_2626 9fd2b590949a067f600be2d2cdd81b8e 581 Pfam PF00664 ABC transporter transmembrane region 27 297 4.1E-27 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_2626 9fd2b590949a067f600be2d2cdd81b8e 581 SUPERFAMILY SSF52540 335 574 3.8E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2626 9fd2b590949a067f600be2d2cdd81b8e 581 Gene3D G3DSA:1.20.1560.10 1 328 5.8E-48 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2626 9fd2b590949a067f600be2d2cdd81b8e 581 Gene3D G3DSA:3.40.50.300 333 581 5.2E-87 T 12-10-2018 TDE_2626 9fd2b590949a067f600be2d2cdd81b8e 581 SUPERFAMILY SSF90123 13 329 4.05E-57 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2626 9fd2b590949a067f600be2d2cdd81b8e 581 Pfam PF00005 ABC transporter 355 504 2.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2626 9fd2b590949a067f600be2d2cdd81b8e 581 SMART SM00382 364 550 7.0E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2626 9fd2b590949a067f600be2d2cdd81b8e 581 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2577 1b3deeb4f0872a948e87ac73f5fb71ad 137 SUPERFAMILY SSF88723 1 133 4.25E-16 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_2577 1b3deeb4f0872a948e87ac73f5fb71ad 137 Gene3D G3DSA:3.40.50.1010 4 134 2.3E-5 T 12-10-2018 TDE_2577 1b3deeb4f0872a948e87ac73f5fb71ad 137 Pfam PF13470 PIN domain 4 117 2.3E-13 T 12-10-2018 IPR002716 PIN domain TDE_0154 a8808b57907b14cdb016fe98594310a3 692 Pfam PF07695 7TM diverse intracellular signalling 206 402 2.3E-15 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 TDE_0154 a8808b57907b14cdb016fe98594310a3 692 Gene3D G3DSA:3.30.70.1230 453 645 5.0E-34 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_0154 a8808b57907b14cdb016fe98594310a3 692 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 458 604 3.5E-16 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TDE_0154 a8808b57907b14cdb016fe98594310a3 692 SUPERFAMILY SSF55073 450 617 1.54E-34 T 12-10-2018 IPR029787 Nucleotide cyclase TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 Gene3D G3DSA:1.25.40.10 216 325 4.3E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 SMART SM00954 29 154 3.3E-23 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 SUPERFAMILY SSF48452 233 368 2.04E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 SUPERFAMILY SSF81301 10 182 1.8E-33 T 12-10-2018 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 Gene3D G3DSA:3.30.460.10 2 135 3.1E-23 T 12-10-2018 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 SMART SM00028 233 266 7.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 SMART SM00028 304 337 0.083 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 SMART SM00028 338 371 54.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 SMART SM00028 270 303 0.058 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 Gene3D G3DSA:1.25.40.10 326 385 4.3E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 Pfam PF13181 Tetratricopeptide repeat 313 335 0.068 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1711 6e112ce1f313f7b6ac14b6487be2bc8a 388 Pfam PF04607 Region found in RelA / SpoT proteins 29 150 2.8E-22 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 TDE_0833 15c92950def504c2beab0d97e1165153 341 Pfam PF03781 Sulfatase-modifying factor enzyme 1 82 338 4.6E-38 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_0833 15c92950def504c2beab0d97e1165153 341 SUPERFAMILY SSF56436 82 339 1.62E-45 T 12-10-2018 IPR016187 C-type lectin fold TDE_0833 15c92950def504c2beab0d97e1165153 341 Gene3D G3DSA:3.90.1580.10 70 341 3.4E-71 T 12-10-2018 TDE_0836 df4713c15139d0d30df2c9ca4e8ea671 189 Pfam PF04205 FMN-binding domain 99 172 1.0E-10 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TDE_0836 df4713c15139d0d30df2c9ca4e8ea671 189 PIRSF PIRSF006091 1 187 7.3E-26 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 TDE_0836 df4713c15139d0d30df2c9ca4e8ea671 189 SMART SM00900 94 176 3.1E-13 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TDE_0292 5e232cdc6c84516aba9d4fad4adf922c 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 277 35.024 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TDE_0292 5e232cdc6c84516aba9d4fad4adf922c 279 SUPERFAMILY SSF53335 9 274 1.41E-62 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0292 5e232cdc6c84516aba9d4fad4adf922c 279 Gene3D G3DSA:3.40.50.150 1 277 8.9E-82 T 12-10-2018 TDE_0292 5e232cdc6c84516aba9d4fad4adf922c 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 273 5.4E-48 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TDE_0845 98b87deca776af80892083a83da20a0d 224 Gene3D G3DSA:3.60.160.10 1 221 3.0E-76 T 12-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily TDE_0845 98b87deca776af80892083a83da20a0d 224 SUPERFAMILY SSF51219 1 223 8.11E-71 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily TDE_0845 98b87deca776af80892083a83da20a0d 224 Pfam PF01987 Mitochondrial biogenesis AIM24 3 207 7.8E-63 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 TDE_0845 98b87deca776af80892083a83da20a0d 224 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 1 220 1.5E-35 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 TDE_1153 aa5b91c864d0995494117c8ddd0cee7b 198 SUPERFAMILY SSF54060 88 160 1.65E-13 T 12-10-2018 TDE_1153 aa5b91c864d0995494117c8ddd0cee7b 198 Pfam PF13392 HNH endonuclease 118 161 6.9E-16 T 12-10-2018 IPR003615 HNH nuclease TDE_0328 d31ca38cb292104b1e25c0f1ac8c69d4 290 Pfam PF01867 CRISPR associated protein Cas1 6 232 4.2E-23 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TDE_0328 d31ca38cb292104b1e25c0f1ac8c69d4 290 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 3 271 3.8E-98 T 12-10-2018 IPR019855 CRISPR-associated protein Cas1, NMENI subtype GO:0004520|GO:0043571|GO:0046872 TDE_0328 d31ca38cb292104b1e25c0f1ac8c69d4 290 Gene3D G3DSA:3.100.10.20 5 78 2.8E-7 T 12-10-2018 TDE_0328 d31ca38cb292104b1e25c0f1ac8c69d4 290 Gene3D G3DSA:1.20.120.920 88 281 2.0E-33 T 12-10-2018 TDE_0328 d31ca38cb292104b1e25c0f1ac8c69d4 290 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 19 260 2.9E-27 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TDE_0328 d31ca38cb292104b1e25c0f1ac8c69d4 290 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 262 17.271 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 TDE_1183 6b4dc16aad716ceb8a142e20471477ef 220 Gene3D G3DSA:3.40.50.300 2 205 5.1E-42 T 12-10-2018 TDE_1183 6b4dc16aad716ceb8a142e20471477ef 220 Pfam PF00005 ABC transporter 3 128 1.5E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1183 6b4dc16aad716ceb8a142e20471477ef 220 SUPERFAMILY SSF52540 3 180 5.33E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1052 cd8dfd93c2d8d559c9572ae19cc4b381 52 Gene3D G3DSA:2.20.28.10 1 52 6.1E-29 T 12-10-2018 TDE_1052 cd8dfd93c2d8d559c9572ae19cc4b381 52 PIRSF PIRSF000071 1 52 8.5E-29 T 12-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 TDE_1052 cd8dfd93c2d8d559c9572ae19cc4b381 52 SUPERFAMILY SSF57802 1 51 1.16E-23 T 12-10-2018 TDE_1052 cd8dfd93c2d8d559c9572ae19cc4b381 52 Pfam PF00301 Rubredoxin 3 49 3.9E-26 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 TDE_1052 cd8dfd93c2d8d559c9572ae19cc4b381 52 PRINTS PR00163 Rubredoxin signature 33 49 5.6E-13 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 TDE_1052 cd8dfd93c2d8d559c9572ae19cc4b381 52 PRINTS PR00163 Rubredoxin signature 3 19 5.6E-13 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 TDE_1052 cd8dfd93c2d8d559c9572ae19cc4b381 52 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 12-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 TDE_2629 ee224006472272fbbe8bc16d3b46c885 517 Gene3D G3DSA:3.10.105.10 278 482 2.2E-97 T 12-10-2018 TDE_2629 ee224006472272fbbe8bc16d3b46c885 517 Gene3D G3DSA:3.90.76.10 72 188 2.2E-97 T 12-10-2018 TDE_2629 ee224006472272fbbe8bc16d3b46c885 517 SUPERFAMILY SSF53850 43 494 3.44E-95 T 12-10-2018 TDE_2629 ee224006472272fbbe8bc16d3b46c885 517 Gene3D G3DSA:3.40.190.10 54 277 2.2E-97 T 12-10-2018 TDE_2629 ee224006472272fbbe8bc16d3b46c885 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 431 1.1E-64 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain TDE_2629 ee224006472272fbbe8bc16d3b46c885 517 PIRSF PIRSF002741 1 507 5.9E-79 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TDE_1566 01acf66022e503e77017911387371679 360 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 82 163 2.6E-18 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 TDE_1566 01acf66022e503e77017911387371679 360 Gene3D G3DSA:2.180.10.10 1 163 1.8E-35 T 12-10-2018 TDE_0376 99599659fe809cd375b982d4a9adce86 539 SUPERFAMILY SSF161098 14 266 5.23E-42 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0376 99599659fe809cd375b982d4a9adce86 539 SUPERFAMILY SSF161098 298 532 5.49E-26 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0376 99599659fe809cd375b982d4a9adce86 539 Gene3D G3DSA:1.10.3720.10 286 539 1.5E-25 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0376 99599659fe809cd375b982d4a9adce86 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 263 1.1E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0376 99599659fe809cd375b982d4a9adce86 539 Gene3D G3DSA:1.10.3720.10 15 271 1.1E-44 T 12-10-2018 IPR035906 MetI-like superfamily TDE_2287 1bc5f8c4914e1b6ccdc65bb0842eb64a 249 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 153 243 2.7E-22 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TDE_2287 1bc5f8c4914e1b6ccdc65bb0842eb64a 249 Gene3D G3DSA:3.10.50.40 132 244 7.4E-34 T 12-10-2018 TDE_2287 1bc5f8c4914e1b6ccdc65bb0842eb64a 249 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 36 143 7.6E-19 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 TDE_2287 1bc5f8c4914e1b6ccdc65bb0842eb64a 249 SUPERFAMILY SSF54534 49 246 1.51E-46 T 12-10-2018 TDE_2287 1bc5f8c4914e1b6ccdc65bb0842eb64a 249 Gene3D G3DSA:1.10.287.460 31 131 7.4E-15 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 TDE_2161 83287f8569d41f118415fed925d3ae0b 184 Gene3D G3DSA:3.40.630.30 4 178 8.0E-44 T 12-10-2018 TDE_2161 83287f8569d41f118415fed925d3ae0b 184 SUPERFAMILY SSF55729 3 170 6.03E-41 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2161 83287f8569d41f118415fed925d3ae0b 184 Pfam PF13302 Acetyltransferase (GNAT) domain 12 146 6.7E-25 T 12-10-2018 IPR000182 GNAT domain TDE_1181 1080b72e45e0d2164d48fdf92a60b02b 188 Gene3D G3DSA:3.40.50.150 38 175 4.1E-15 T 12-10-2018 TDE_1181 1080b72e45e0d2164d48fdf92a60b02b 188 Pfam PF00891 O-methyltransferase 67 157 2.2E-12 T 12-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 TDE_1181 1080b72e45e0d2164d48fdf92a60b02b 188 SUPERFAMILY SSF53335 46 172 3.01E-18 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_1774 312c583196bd8a2a03a0ff9073680792 129 Gene3D G3DSA:3.10.180.10 2 129 4.1E-43 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TDE_1774 312c583196bd8a2a03a0ff9073680792 129 SUPERFAMILY SSF54593 6 127 2.75E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TDE_1380 db7ab332183d4772a4b62c323d97ed58 183 Pfam PF10962 Protein of unknown function (DUF2764) 117 180 1.1E-4 T 12-10-2018 IPR024492 Protein of unknown function DUF2764 TDE_0796 1558987bd24329f74013401aeb01e887 269 SUPERFAMILY SSF89550 9 258 1.7E-33 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TDE_0796 1558987bd24329f74013401aeb01e887 269 Gene3D G3DSA:3.20.20.140 8 261 4.7E-47 T 12-10-2018 TDE_0796 1558987bd24329f74013401aeb01e887 269 Pfam PF02811 PHP domain 10 105 1.2E-6 T 12-10-2018 IPR004013 PHP domain GO:0003824 TDE_1648 584de05f58e6f0194f35554fae0d2265 84 SUPERFAMILY SSF143011 1 81 5.49E-18 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_1648 584de05f58e6f0194f35554fae0d2265 84 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 73 9.6E-6 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TDE_1648 584de05f58e6f0194f35554fae0d2265 84 Gene3D G3DSA:3.30.2310.20 2 84 1.2E-14 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0169 d6d58f7ff10582d5b967b87fc236027e 552 Gene3D G3DSA:1.10.287.950 306 552 8.0E-38 T 12-10-2018 TDE_0169 d6d58f7ff10582d5b967b87fc236027e 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 403 533 1.2E-24 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_0169 d6d58f7ff10582d5b967b87fc236027e 552 SUPERFAMILY SSF58104 339 548 1.7E-34 T 12-10-2018 TDE_0169 d6d58f7ff10582d5b967b87fc236027e 552 SMART SM00283 334 550 6.3E-5 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TDE_1656 4458068743af877d64b46889b8dec3c8 553 SUPERFAMILY SSF48452 439 548 4.09E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1656 4458068743af877d64b46889b8dec3c8 553 Pfam PF07720 Tetratricopeptide repeat 467 499 0.012 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 TDE_1656 4458068743af877d64b46889b8dec3c8 553 SUPERFAMILY SSF48452 70 270 9.28E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1656 4458068743af877d64b46889b8dec3c8 553 Gene3D G3DSA:1.25.40.10 392 553 4.2E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1310 06f65ff1fe1f3fa62b4595b7715904f7 432 Pfam PF01523 Putative modulator of DNA gyrase 19 314 7.9E-31 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TDE_1310 06f65ff1fe1f3fa62b4595b7715904f7 432 SUPERFAMILY SSF111283 3 429 8.24E-45 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TDE_1283 3666f19e6fdb733e12e156926ff88c48 436 SUPERFAMILY SSF53850 20 435 2.42E-57 T 12-10-2018 TDE_1283 3666f19e6fdb733e12e156926ff88c48 436 Gene3D G3DSA:3.40.190.10 21 434 2.1E-55 T 12-10-2018 TDE_1283 3666f19e6fdb733e12e156926ff88c48 436 Pfam PF01547 Bacterial extracellular solute-binding protein 45 351 1.3E-29 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein TDE_1708 80025baab6e618f89b8e52e6bbf2d032 544 Gene3D G3DSA:3.60.110.10 216 508 2.3E-18 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_1708 80025baab6e618f89b8e52e6bbf2d032 544 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 62 482 3.2E-96 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TDE_1708 80025baab6e618f89b8e52e6bbf2d032 544 Pfam PF00795 Carbon-nitrogen hydrolase 226 500 5.2E-29 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TDE_1708 80025baab6e618f89b8e52e6bbf2d032 544 SUPERFAMILY SSF56317 222 500 5.49E-38 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_1708 80025baab6e618f89b8e52e6bbf2d032 544 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 522 18.118 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TDE_2620 ac3933c6417f6a9275ba6b8da8e788e8 139 SUPERFAMILY SSF53474 3 98 1.54E-11 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2620 ac3933c6417f6a9275ba6b8da8e788e8 139 Gene3D G3DSA:3.40.50.1820 2 130 1.7E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_1437 2ac7c211d0811d80ba2c379c507c0547 324 SUPERFAMILY SSF53448 5 230 8.44E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1437 2ac7c211d0811d80ba2c379c507c0547 324 Gene3D G3DSA:3.90.550.10 5 208 3.8E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1437 2ac7c211d0811d80ba2c379c507c0547 324 Pfam PF00535 Glycosyl transferase family 2 7 106 4.9E-26 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TDE_1320 2a2d3148fe8003f6db691c5f6dd43927 524 Pfam PF03772 Competence protein 252 512 1.9E-38 T 12-10-2018 IPR004477 ComEC/Rec2-related protein TDE_1320 2a2d3148fe8003f6db691c5f6dd43927 524 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 271 443 8.9E-17 T 12-10-2018 IPR004477 ComEC/Rec2-related protein TDE_1342 40fb1c042d58f3f44a653e0ef2f7cb3e 679 Gene3D G3DSA:1.25.40.10 51 218 1.1E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2615 0c506da1c541844c8d518ca1cd55c6fc 173 TIGRFAM TIGR00077 lspA: signal peptidase II 6 169 9.8E-29 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TDE_2615 0c506da1c541844c8d518ca1cd55c6fc 173 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 5 167 14.275 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TDE_2615 0c506da1c541844c8d518ca1cd55c6fc 173 Pfam PF01252 Signal peptidase (SPase) II 14 158 2.8E-29 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TDE_2615 0c506da1c541844c8d518ca1cd55c6fc 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 3.8E-9 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TDE_2615 0c506da1c541844c8d518ca1cd55c6fc 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 3.8E-9 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TDE_2615 0c506da1c541844c8d518ca1cd55c6fc 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.8E-9 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TDE_2615 0c506da1c541844c8d518ca1cd55c6fc 173 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TDE_2515 0c234078fd707cbb91f8b2f4f20d8066 361 Gene3D G3DSA:3.90.1580.10 47 361 1.3E-73 T 12-10-2018 TDE_2515 0c234078fd707cbb91f8b2f4f20d8066 361 Pfam PF03781 Sulfatase-modifying factor enzyme 1 77 358 2.0E-38 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_2515 0c234078fd707cbb91f8b2f4f20d8066 361 SUPERFAMILY SSF56436 74 359 3.06E-50 T 12-10-2018 IPR016187 C-type lectin fold TDE_0170 4cf391b63ed524f6aac131302c4ed07e 383 Gene3D G3DSA:3.60.21.10 1 267 6.4E-65 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like TDE_0170 4cf391b63ed524f6aac131302c4ed07e 383 Pfam PF00149 Calcineurin-like phosphoesterase 1 99 4.0E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TDE_0170 4cf391b63ed524f6aac131302c4ed07e 383 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 244 2.8E-58 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 TDE_0170 4cf391b63ed524f6aac131302c4ed07e 383 SUPERFAMILY SSF56300 1 308 5.84E-43 T 12-10-2018 TDE_0956 c5081692856044f65863ec19aaffdf54 264 Gene3D G3DSA:3.10.310.50 24 166 1.6E-47 T 12-10-2018 TDE_0956 c5081692856044f65863ec19aaffdf54 264 Pfam PF04536 TPM domain 35 159 1.8E-38 T 12-10-2018 IPR007621 TPM domain TDE_1719 2f334eaf95ba6d1dc487e1a3dc27ce3d 145 SMART SM00347 22 125 4.3E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_1719 2f334eaf95ba6d1dc487e1a3dc27ce3d 145 Gene3D G3DSA:1.10.10.10 1 142 6.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1719 2f334eaf95ba6d1dc487e1a3dc27ce3d 145 Pfam PF01047 MarR family 35 89 3.0E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_1719 2f334eaf95ba6d1dc487e1a3dc27ce3d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 2.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_1719 2f334eaf95ba6d1dc487e1a3dc27ce3d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 2.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_1719 2f334eaf95ba6d1dc487e1a3dc27ce3d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 2.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TDE_1719 2f334eaf95ba6d1dc487e1a3dc27ce3d 145 TIGRFAM TIGR04472 reg_rSAM_mob: mobile rSAM pair MarR family regulator 4 144 8.9E-89 T 12-10-2018 IPR031011 MarR family transcriptional regulator TDE_1719 2f334eaf95ba6d1dc487e1a3dc27ce3d 145 SUPERFAMILY SSF46785 7 143 3.55E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_2290 11119b71cf7d214fb26e91d6b117a0f4 208 Gene3D G3DSA:2.30.30.840 2 67 8.5E-21 T 12-10-2018 TDE_2290 11119b71cf7d214fb26e91d6b117a0f4 208 SMART SM01058 6 116 1.5E-24 T 12-10-2018 IPR003711 CarD-like/TRCF domain TDE_2290 11119b71cf7d214fb26e91d6b117a0f4 208 Pfam PF02559 CarD-like/TRCF domain 7 114 6.8E-14 T 12-10-2018 IPR003711 CarD-like/TRCF domain TDE_2290 11119b71cf7d214fb26e91d6b117a0f4 208 Gene3D G3DSA:1.20.58.1290 68 163 1.2E-21 T 12-10-2018 TDE_2290 11119b71cf7d214fb26e91d6b117a0f4 208 SUPERFAMILY SSF141259 7 70 7.45E-12 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily TDE_2486 be2b7cc93c46da22d60a8ac19dbdc8d2 184 Pfam PF00882 Zinc dependent phospholipase C 7 178 3.7E-6 T 12-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 TDE_0778 aefc12a8aa4b3567d570af484bfd0828 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 103 1.9E-24 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0778 aefc12a8aa4b3567d570af484bfd0828 104 Gene3D G3DSA:2.30.30.30 1 103 1.4E-36 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 TDE_0778 aefc12a8aa4b3567d570af484bfd0828 104 Pfam PF00467 KOW motif 10 39 2.7E-6 T 12-10-2018 IPR005824 KOW TDE_0778 aefc12a8aa4b3567d570af484bfd0828 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 10 27 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_0778 aefc12a8aa4b3567d570af484bfd0828 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 5 98 19.018 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0778 aefc12a8aa4b3567d570af484bfd0828 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 103 4.0E-34 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0778 aefc12a8aa4b3567d570af484bfd0828 104 SMART SM00739 6 33 5.7E-4 T 12-10-2018 IPR005824 KOW TDE_0778 aefc12a8aa4b3567d570af484bfd0828 104 SUPERFAMILY SSF50104 4 102 7.52E-31 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily TDE_0201 e12c9dda9e99f27086349723ef270560 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 31 89 4.3E-10 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal TDE_0201 e12c9dda9e99f27086349723ef270560 93 SUPERFAMILY SSF101498 11 89 2.75E-6 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily TDE_0853 35a18f9635024252512620d6bae7fe11 124 Pfam PF00380 Ribosomal protein S9/S16 4 124 1.9E-46 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 TDE_0853 35a18f9635024252512620d6bae7fe11 124 ProSitePatterns PS00360 Ribosomal protein S9 signature. 63 81 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 TDE_0853 35a18f9635024252512620d6bae7fe11 124 SUPERFAMILY SSF54211 2 124 2.88E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TDE_0853 35a18f9635024252512620d6bae7fe11 124 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 124 28.349 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid TDE_0853 35a18f9635024252512620d6bae7fe11 124 Gene3D G3DSA:3.30.230.10 1 124 3.0E-48 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 Gene3D G3DSA:3.30.830.10 252 492 1.1E-58 T 12-10-2018 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 Gene3D G3DSA:3.30.830.10 502 984 1.7E-110 T 12-10-2018 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 SUPERFAMILY SSF63411 819 1004 1.45E-26 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 SUPERFAMILY SSF63411 4 254 1.04E-43 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 Pfam PF08367 Peptidase M16C associated 471 732 5.3E-52 T 12-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 SUPERFAMILY SSF63411 528 810 1.08E-50 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 Pfam PF00675 Insulinase (Peptidase family M16) 55 148 4.4E-7 T 12-10-2018 IPR011765 Peptidase M16, N-terminal TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 Gene3D G3DSA:3.30.830.10 1 248 1.1E-76 T 12-10-2018 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 SUPERFAMILY SSF63411 258 526 5.0E-52 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 SMART SM01264 469 732 8.9E-77 T 12-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 Gene3D G3DSA:3.30.830.10 536 811 1.7E-110 T 12-10-2018 TDE_1865 d124b76de4fffefd6382e9ace2dbc737 1017 Pfam PF05193 Peptidase M16 inactive domain 200 392 2.6E-21 T 12-10-2018 IPR007863 Peptidase M16, C-terminal TDE_1340 01a92ddd759b24bbc6b3ee9c0b330c9a 211 SUPERFAMILY SSF50715 11 180 2.79E-49 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TDE_1340 01a92ddd759b24bbc6b3ee9c0b330c9a 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 183 27.046 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TDE_1340 01a92ddd759b24bbc6b3ee9c0b330c9a 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 95 4.0E-47 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TDE_1340 01a92ddd759b24bbc6b3ee9c0b330c9a 211 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 179 2.3E-58 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TDE_1340 01a92ddd759b24bbc6b3ee9c0b330c9a 211 Gene3D G3DSA:2.170.120.20 98 188 2.3E-26 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal TDE_1340 01a92ddd759b24bbc6b3ee9c0b330c9a 211 Gene3D G3DSA:2.40.240.10 4 95 6.2E-25 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TDE_1340 01a92ddd759b24bbc6b3ee9c0b330c9a 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 180 2.8E-25 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain TDE_1340 01a92ddd759b24bbc6b3ee9c0b330c9a 211 Pfam PF01386 Ribosomal L25p family 6 92 9.1E-23 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TDE_1278 ca91e2901cdfa9c5c9a9a167c7be8aa2 186 Gene3D G3DSA:3.40.50.10360 6 186 8.1E-79 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like TDE_1278 ca91e2901cdfa9c5c9a9a167c7be8aa2 186 SUPERFAMILY SSF110710 7 183 6.8E-75 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like TDE_1278 ca91e2901cdfa9c5c9a9a167c7be8aa2 186 Pfam PF04260 Protein of unknown function (DUF436) 15 182 2.0E-74 T 12-10-2018 IPR006340 Protein of unknown function DUF436 TDE_1278 ca91e2901cdfa9c5c9a9a167c7be8aa2 186 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 27 184 9.0E-79 T 12-10-2018 IPR006340 Protein of unknown function DUF436 TDE_1278 ca91e2901cdfa9c5c9a9a167c7be8aa2 186 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 13 182 8.4E-73 T 12-10-2018 IPR006340 Protein of unknown function DUF436 TDE_1278 ca91e2901cdfa9c5c9a9a167c7be8aa2 186 Hamap MF_00800 UPF0340 protein . 1 186 90.546 T 12-10-2018 IPR006340 Protein of unknown function DUF436 TDE_1278 ca91e2901cdfa9c5c9a9a167c7be8aa2 186 PIRSF PIRSF007510 4 185 1.8E-77 T 12-10-2018 IPR006340 Protein of unknown function DUF436 TDE_0931 5a6d85702f48c0d6c7d78422ed5bff82 448 Pfam PF01554 MatE 241 400 8.8E-29 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0931 5a6d85702f48c0d6c7d78422ed5bff82 448 Pfam PF01554 MatE 19 178 3.4E-38 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0931 5a6d85702f48c0d6c7d78422ed5bff82 448 PIRSF PIRSF006603 1 447 1.3E-128 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0931 5a6d85702f48c0d6c7d78422ed5bff82 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 413 2.5E-91 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0859 e3c745856603e6215980ac6e860585d6 308 Pfam PF01070 FMN-dependent dehydrogenase 160 289 1.6E-20 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 TDE_0859 e3c745856603e6215980ac6e860585d6 308 SUPERFAMILY SSF51395 60 300 1.22E-20 T 12-10-2018 TDE_0859 e3c745856603e6215980ac6e860585d6 308 Gene3D G3DSA:3.20.20.70 56 300 9.4E-24 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2594 3f66a7268b655acf7700cbceb716f439 366 SMART SM00028 70 103 9.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2594 3f66a7268b655acf7700cbceb716f439 366 SMART SM00028 36 69 0.35 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_2594 3f66a7268b655acf7700cbceb716f439 366 Gene3D G3DSA:1.25.40.10 2 117 5.5E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2594 3f66a7268b655acf7700cbceb716f439 366 SUPERFAMILY SSF48452 6 114 8.54E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2279 dd1edce6ac43da6e58e9ea465ec31dad 496 SUPERFAMILY SSF109604 233 487 3.01E-53 T 12-10-2018 TDE_2279 dd1edce6ac43da6e58e9ea465ec31dad 496 Gene3D G3DSA:1.10.3210.10 220 492 1.2E-56 T 12-10-2018 TDE_2279 dd1edce6ac43da6e58e9ea465ec31dad 496 Pfam PF08668 HDOD domain 241 433 5.1E-55 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD TDE_2225 fb1abdaf3653db983ec1ebd36489284d 135 Gene3D G3DSA:3.10.129.10 1 126 1.9E-35 T 12-10-2018 TDE_2225 fb1abdaf3653db983ec1ebd36489284d 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 121 3.3E-22 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TDE_2225 fb1abdaf3653db983ec1ebd36489284d 135 SUPERFAMILY SSF54637 2 124 6.8E-36 T 12-10-2018 IPR029069 HotDog domain superfamily TDE_2225 fb1abdaf3653db983ec1ebd36489284d 135 Pfam PF13279 Thioesterase-like superfamily 10 123 8.8E-18 T 12-10-2018 TDE_2225 fb1abdaf3653db983ec1ebd36489284d 135 PIRSF PIRSF003230 1 130 1.8E-27 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TDE_1034 0a4922d4118c23f1004d203abb16aa3f 310 Gene3D G3DSA:1.20.58.340 125 251 6.8E-7 T 12-10-2018 TDE_1034 0a4922d4118c23f1004d203abb16aa3f 310 SUPERFAMILY SSF143865 30 242 1.09E-20 T 12-10-2018 TDE_1034 0a4922d4118c23f1004d203abb16aa3f 310 Pfam PF01544 CorA-like Mg2+ transporter protein 31 306 4.0E-44 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 TDE_1034 0a4922d4118c23f1004d203abb16aa3f 310 SUPERFAMILY SSF144083 246 308 2.09E-21 T 12-10-2018 TDE_1034 0a4922d4118c23f1004d203abb16aa3f 310 Gene3D G3DSA:1.20.58.340 253 310 5.7E-20 T 12-10-2018 TDE_2765 06f18fb698bfebd512a3675de0306e76 239 Pfam PF00691 OmpA family 125 227 5.2E-19 T 12-10-2018 IPR006665 OmpA-like domain TDE_2765 06f18fb698bfebd512a3675de0306e76 239 SUPERFAMILY SSF103088 113 233 2.09E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_2765 06f18fb698bfebd512a3675de0306e76 239 Gene3D G3DSA:3.30.1330.60 78 238 1.5E-41 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_2765 06f18fb698bfebd512a3675de0306e76 239 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 53 1.9E-16 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain TDE_1428 3825280f15c52800f0a3676c44ad33eb 446 Gene3D G3DSA:3.40.50.300 129 369 5.9E-6 T 12-10-2018 TDE_1428 3825280f15c52800f0a3676c44ad33eb 446 SUPERFAMILY SSF52540 161 307 1.35E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2694 7fb88c11272830726c170385eb451a63 740 PIRSF PIRSF008381 538 739 1.2E-54 T 12-10-2018 IPR011191 Uncharacterised protein family Treponema vWA TDE_2694 7fb88c11272830726c170385eb451a63 740 PIRSF PIRSF008381 301 481 6.0E-20 T 12-10-2018 IPR011191 Uncharacterised protein family Treponema vWA TDE_2694 7fb88c11272830726c170385eb451a63 740 PIRSF PIRSF008381 1 195 1.3E-56 T 12-10-2018 IPR011191 Uncharacterised protein family Treponema vWA TDE_2694 7fb88c11272830726c170385eb451a63 740 Gene3D G3DSA:3.40.50.410 18 185 8.4E-10 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_2694 7fb88c11272830726c170385eb451a63 740 SUPERFAMILY SSF53300 28 180 2.91E-12 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_2350 2f6e6433dde6fca6632acfcfaf62e5cd 202 SUPERFAMILY SSF55729 28 122 1.48E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_1723 949ce57b972b1d6b7f2a414a211d5a9a 354 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 43 297 1.7E-13 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 TDE_1723 949ce57b972b1d6b7f2a414a211d5a9a 354 Gene3D G3DSA:3.20.20.80 52 346 8.3E-44 T 12-10-2018 TDE_1723 949ce57b972b1d6b7f2a414a211d5a9a 354 SUPERFAMILY SSF51445 56 335 2.61E-38 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_0446 f4df9edf0af482e5a85d5820b9192997 499 SMART SM00060 395 476 3.0E-5 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 TDE_0446 f4df9edf0af482e5a85d5820b9192997 499 SUPERFAMILY SSF49899 99 274 2.18E-12 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily TDE_0446 f4df9edf0af482e5a85d5820b9192997 499 Gene3D G3DSA:2.60.120.200 52 276 1.5E-9 T 12-10-2018 TDE_0446 f4df9edf0af482e5a85d5820b9192997 499 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 129 273 2.1E-7 T 12-10-2018 TDE_0446 f4df9edf0af482e5a85d5820b9192997 499 SUPERFAMILY SSF49265 394 484 9.63E-11 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TDE_0446 f4df9edf0af482e5a85d5820b9192997 499 Gene3D G3DSA:2.60.40.10 395 490 9.4E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_1232 29e25ca764ebe216bcd6ea706538dbc2 559 SUPERFAMILY SSF56436 270 557 2.02E-36 T 12-10-2018 IPR016187 C-type lectin fold TDE_1232 29e25ca764ebe216bcd6ea706538dbc2 559 Gene3D G3DSA:3.90.1580.10 258 558 2.9E-52 T 12-10-2018 TDE_1232 29e25ca764ebe216bcd6ea706538dbc2 559 Pfam PF03781 Sulfatase-modifying factor enzyme 1 270 557 3.4E-30 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_2002 761b4932b3fc786fd3bf8287396faabe 198 Gene3D G3DSA:2.60.40.1120 3 84 1.3E-5 T 12-10-2018 TDE_2002 761b4932b3fc786fd3bf8287396faabe 198 SUPERFAMILY SSF49464 4 91 1.06E-8 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TDE_1948 fe0f9b6d60494e0d181d9b96e40bfc89 365 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 340 1.4E-41 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TDE_0663 a35f78d87524f6775f446c3edc14aa53 85 Pfam PF04221 RelB antitoxin 6 50 1.5E-8 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_0663 a35f78d87524f6775f446c3edc14aa53 85 Gene3D G3DSA:1.10.1220.10 1 51 6.1E-7 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TDE_0663 a35f78d87524f6775f446c3edc14aa53 85 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 63 4.7E-18 T 12-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TDE_1021 ab35804c66cadc065fe29f2d4eeaa99d 324 Pfam PF16811 TRAP transporter T-component 58 318 9.8E-102 T 12-10-2018 IPR031823 TRAP transporter T-component TDE_1021 ab35804c66cadc065fe29f2d4eeaa99d 324 Gene3D G3DSA:1.25.40.920 52 320 2.7E-87 T 12-10-2018 IPR038537 TatT superfamily TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 SUPERFAMILY SSF53738 213 316 5.77E-19 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 146 160 1.1E-7 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 301 316 1.1E-7 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 254 1.1E-7 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 46 186 2.5E-39 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 Gene3D G3DSA:3.40.120.10 213 329 1.4E-25 T 12-10-2018 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 214 317 1.9E-28 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 Gene3D G3DSA:3.40.120.10 38 197 1.5E-46 T 12-10-2018 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 Gene3D G3DSA:3.30.310.50 474 575 1.4E-7 T 12-10-2018 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 554 5.0E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 SUPERFAMILY SSF55957 449 553 7.06E-13 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 Gene3D G3DSA:3.40.120.10 330 457 1.1E-31 T 12-10-2018 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 SUPERFAMILY SSF53738 309 459 2.32E-27 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 330 455 2.6E-17 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 147 156 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_1998 ea49d0533e5bc9bf29b06be3e240d71d 587 SUPERFAMILY SSF53738 33 242 3.83E-45 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TDE_2675 e8891894af61d752a3db1a7a4d4337b2 296 SUPERFAMILY SSF55729 137 295 9.64E-46 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2675 e8891894af61d752a3db1a7a4d4337b2 296 Gene3D G3DSA:3.40.630.30 124 290 9.3E-75 T 12-10-2018 TDE_2675 e8891894af61d752a3db1a7a4d4337b2 296 PIRSF PIRSF018688 3 296 2.2E-102 T 12-10-2018 IPR016732 Uncharacterised conserved protein UCP018688 TDE_2675 e8891894af61d752a3db1a7a4d4337b2 296 SUPERFAMILY SSF55729 8 136 8.16E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2675 e8891894af61d752a3db1a7a4d4337b2 296 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 27 293 1.3E-33 T 12-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal TDE_2675 e8891894af61d752a3db1a7a4d4337b2 296 Gene3D G3DSA:3.40.630.30 9 292 9.3E-75 T 12-10-2018 TDE_2243 cd46d9a95bf480304e17a1d65a82e6a6 246 Gene3D G3DSA:3.20.20.380 3 245 7.9E-82 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 TDE_2243 cd46d9a95bf480304e17a1d65a82e6a6 246 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 4 206 28.939 T 12-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 TDE_2243 cd46d9a95bf480304e17a1d65a82e6a6 246 SUPERFAMILY SSF110395 4 244 1.09E-66 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 TDE_2243 cd46d9a95bf480304e17a1d65a82e6a6 246 Pfam PF03932 CutC family 5 203 3.2E-66 T 12-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 TDE_0165 dcb12c4e126b046b13626450c8b1bfbc 284 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 239 4.8E-74 T 12-10-2018 TDE_0165 dcb12c4e126b046b13626450c8b1bfbc 284 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 283 2.0E-47 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_0340 12ce33cabf022e9e063f986209f5dbdf 295 SUPERFAMILY SSF51569 6 294 1.15E-93 T 12-10-2018 TDE_0340 12ce33cabf022e9e063f986209f5dbdf 295 Hamap MF_00729 Fructose-bisphosphate aldolase class 1 [fda]. 2 294 52.213 T 12-10-2018 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 TDE_0340 12ce33cabf022e9e063f986209f5dbdf 295 Pfam PF00274 Fructose-bisphosphate aldolase class-I 12 206 1.8E-10 T 12-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TDE_0340 12ce33cabf022e9e063f986209f5dbdf 295 Gene3D G3DSA:3.20.20.70 1 295 7.4E-127 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2467 fe4d3d981098d619390614da8d9a7ec0 349 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 6 341 1.3E-154 T 12-10-2018 IPR026366 Putative selenium metabolism protein, YedE family TDE_2467 fe4d3d981098d619390614da8d9a7ec0 349 Pfam PF04143 Sulphur transport 206 315 4.5E-10 T 12-10-2018 IPR007272 Sulphur transport domain TDE_1366 fad569c13a5bf07fb5426e6553e30f18 193 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 9.5E-12 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TDE_1366 fad569c13a5bf07fb5426e6553e30f18 193 Gene3D G3DSA:1.20.120.1760 9 192 3.0E-13 T 12-10-2018 TDE_1366 fad569c13a5bf07fb5426e6553e30f18 193 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TDE_0656 42b9d2390a5c7671b57f93af770e1a0d 357 SUPERFAMILY SSF55874 198 347 1.15E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0656 42b9d2390a5c7671b57f93af770e1a0d 357 SMART SM00387 238 351 1.2E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0656 42b9d2390a5c7671b57f93af770e1a0d 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 347 4.8E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TDE_0656 42b9d2390a5c7671b57f93af770e1a0d 357 Gene3D G3DSA:1.10.287.130 145 194 1.3E-27 T 12-10-2018 TDE_0656 42b9d2390a5c7671b57f93af770e1a0d 357 Gene3D G3DSA:3.30.565.10 195 347 1.3E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0032 de4d18f3066e74ecc879345a64eb5c4a 248 Pfam PF14501 GHKL domain 134 237 4.5E-24 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain TDE_0032 de4d18f3066e74ecc879345a64eb5c4a 248 Gene3D G3DSA:3.30.565.10 94 236 2.7E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0032 de4d18f3066e74ecc879345a64eb5c4a 248 Gene3D G3DSA:1.10.287.130 36 93 6.4E-8 T 12-10-2018 TDE_0032 de4d18f3066e74ecc879345a64eb5c4a 248 SUPERFAMILY SSF55890 41 134 3.01E-21 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 TDE_0032 de4d18f3066e74ecc879345a64eb5c4a 248 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 41 97 1.1E-12 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain TDE_0032 de4d18f3066e74ecc879345a64eb5c4a 248 SUPERFAMILY SSF55874 106 238 2.32E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0873 6e4db46965ce421f1872f99a1bb06684 258 Pfam PF02616 Segregation and condensation protein ScpA 36 247 2.5E-25 T 12-10-2018 IPR003768 Segregation and condensation protein A TDE_0873 6e4db46965ce421f1872f99a1bb06684 258 Hamap MF_01805 Segregation and condensation protein A [scpA]. 19 251 20.35 T 12-10-2018 IPR003768 Segregation and condensation protein A TDE_1827 ba08f4adde7adfdee9718ab930f06244 295 SUPERFAMILY SSF56317 3 277 1.31E-46 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_1827 ba08f4adde7adfdee9718ab930f06244 295 Gene3D G3DSA:3.60.110.10 4 287 8.5E-55 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_1827 ba08f4adde7adfdee9718ab930f06244 295 Pfam PF00795 Carbon-nitrogen hydrolase 6 197 1.4E-25 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TDE_0668 ee5cc6b0e7736796ebe476f44c597b38 375 SUPERFAMILY SSF101960 63 371 8.11E-65 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily TDE_0668 ee5cc6b0e7736796ebe476f44c597b38 375 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 83 362 5.6E-87 T 12-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 TDE_0668 ee5cc6b0e7736796ebe476f44c597b38 375 Pfam PF01458 Uncharacterized protein family (UPF0051) 119 344 5.5E-47 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TDE_1229 4d4eb6fa18f4fd3fc3db308d47e7f6b4 195 SUPERFAMILY SSF56281 1 190 1.95E-24 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_1229 4d4eb6fa18f4fd3fc3db308d47e7f6b4 195 Gene3D G3DSA:3.60.15.10 3 195 8.3E-24 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_0283 9f1052d0940713dac81648dae259b14b 234 Pfam PF02361 Cobalt transport protein 3 192 3.8E-16 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_1754 06dbfd36bfde0dd0e13e1720790d3250 128 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 43 127 6.2E-20 T 12-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 TDE_1754 06dbfd36bfde0dd0e13e1720790d3250 128 Pfam PF01880 Desulfoferrodoxin 43 127 9.7E-24 T 12-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 TDE_1754 06dbfd36bfde0dd0e13e1720790d3250 128 Gene3D G3DSA:2.30.30.510 1 40 3.2E-5 T 12-10-2018 TDE_1754 06dbfd36bfde0dd0e13e1720790d3250 128 Gene3D G3DSA:2.60.40.730 41 128 7.1E-35 T 12-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 TDE_1754 06dbfd36bfde0dd0e13e1720790d3250 128 SUPERFAMILY SSF49367 38 127 1.18E-29 T 12-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 TDE_0263 823f597ef14f9cd3acacaa205eefe607 180 SUPERFAMILY SSF55729 2 167 1.52E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_0263 823f597ef14f9cd3acacaa205eefe607 180 Gene3D G3DSA:3.40.630.30 1 175 1.9E-39 T 12-10-2018 TDE_0263 823f597ef14f9cd3acacaa205eefe607 180 Pfam PF13302 Acetyltransferase (GNAT) domain 5 143 1.7E-17 T 12-10-2018 IPR000182 GNAT domain TDE_1638 27730ac43855ba862a793c5052edb804 223 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 22 211 3.6E-22 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TDE_1638 27730ac43855ba862a793c5052edb804 223 Gene3D G3DSA:3.40.50.300 3 222 8.0E-37 T 12-10-2018 TDE_1638 27730ac43855ba862a793c5052edb804 223 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 20 221 15.925 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TDE_1638 27730ac43855ba862a793c5052edb804 223 SUPERFAMILY SSF52540 20 220 9.69E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1638 27730ac43855ba862a793c5052edb804 223 Pfam PF01121 Dephospho-CoA kinase 22 184 1.4E-19 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TDE_1168 0fb980cecc30a97968d8e0c5807e78c3 177 SUPERFAMILY SSF159006 35 129 3.27E-6 T 12-10-2018 TDE_2748 4d7bd62a2e7fce6a909c01dd5c67264f 152 SUPERFAMILY SSF55729 2 149 2.58E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2748 4d7bd62a2e7fce6a909c01dd5c67264f 152 Pfam PF13673 Acetyltransferase (GNAT) domain 29 132 5.4E-12 T 12-10-2018 IPR000182 GNAT domain TDE_2748 4d7bd62a2e7fce6a909c01dd5c67264f 152 Gene3D G3DSA:3.40.630.30 3 150 2.7E-20 T 12-10-2018 TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 Gene3D G3DSA:3.30.70.20 111 169 4.4E-12 T 12-10-2018 TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 Gene3D G3DSA:3.30.70.20 170 217 3.2E-14 T 12-10-2018 TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 SUPERFAMILY SSF53920 194 470 2.09E-65 T 12-10-2018 IPR009016 Iron hydrogenase TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 SUPERFAMILY SSF54862 142 215 9.21E-17 T 12-10-2018 TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 Pfam PF13237 4Fe-4S dicluster domain 142 206 1.2E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 TIGRFAM TIGR04105 FeFe_hydrog_B1: [FeFe] hydrogenase, group B1/B3 5 468 8.9E-167 T 12-10-2018 IPR027631 [FeFe] hydrogenase, group B1/B3 TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 Gene3D G3DSA:3.40.950.20 265 484 1.8E-33 T 12-10-2018 TDE_1277 4bce3f6f94b7a3b960f63c7e26623422 493 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 227 463 5.4E-57 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TDE_1990 ef7870aba96a46185bfe709ea9669b72 709 Gene3D G3DSA:3.40.50.300 39 315 4.3E-41 T 12-10-2018 TDE_1990 ef7870aba96a46185bfe709ea9669b72 709 Pfam PF13307 Helicase C-terminal domain 526 687 3.6E-36 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TDE_1990 ef7870aba96a46185bfe709ea9669b72 709 SUPERFAMILY SSF52540 61 668 2.02E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1990 ef7870aba96a46185bfe709ea9669b72 709 SMART SM00491 543 674 3.7E-28 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TDE_1990 ef7870aba96a46185bfe709ea9669b72 709 SMART SM00487 37 328 0.0051 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TDE_1990 ef7870aba96a46185bfe709ea9669b72 709 Gene3D G3DSA:3.40.50.300 501 706 4.4E-36 T 12-10-2018 TDE_0354 7c7b87b2eac22640c6537b9bed1bf8ce 184 Pfam PF02525 Flavodoxin-like fold 3 171 1.0E-42 T 12-10-2018 IPR003680 Flavodoxin-like fold TDE_0354 7c7b87b2eac22640c6537b9bed1bf8ce 184 SUPERFAMILY SSF52218 1 176 6.75E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0354 7c7b87b2eac22640c6537b9bed1bf8ce 184 Gene3D G3DSA:3.40.50.360 1 184 1.5E-61 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_0143 048384f81aa86f14e546144e8d403fda 336 Pfam PF13343 Bacterial extracellular solute-binding protein 84 318 1.5E-25 T 12-10-2018 TDE_0143 048384f81aa86f14e546144e8d403fda 336 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 32 313 9.1E-73 T 12-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 TDE_0143 048384f81aa86f14e546144e8d403fda 336 SUPERFAMILY SSF53850 32 335 2.81E-59 T 12-10-2018 TDE_0143 048384f81aa86f14e546144e8d403fda 336 Gene3D G3DSA:3.40.190.10 135 331 1.8E-91 T 12-10-2018 TDE_0143 048384f81aa86f14e546144e8d403fda 336 Gene3D G3DSA:3.40.190.10 35 310 1.8E-91 T 12-10-2018 TDE_1486 c92401725f02d6ec3ce76cfe9569dd25 104 Gene3D G3DSA:1.10.10.10 12 104 1.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1486 c92401725f02d6ec3ce76cfe9569dd25 104 SUPERFAMILY SSF46785 18 102 2.06E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_1486 c92401725f02d6ec3ce76cfe9569dd25 104 Pfam PF13601 Winged helix DNA-binding domain 24 103 2.1E-28 T 12-10-2018 IPR027395 Winged helix DNA-binding domain TDE_0841 ff0df8ab33b3e7f8324828fbc01b5f34 220 Gene3D G3DSA:3.40.50.410 19 207 1.7E-15 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_0841 ff0df8ab33b3e7f8324828fbc01b5f34 220 Pfam PF13519 von Willebrand factor type A domain 31 139 3.5E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A TDE_0841 ff0df8ab33b3e7f8324828fbc01b5f34 220 SUPERFAMILY SSF53300 28 144 7.71E-15 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_0841 ff0df8ab33b3e7f8324828fbc01b5f34 220 SMART SM00327 28 216 3.3E-8 T 12-10-2018 IPR002035 von Willebrand factor, type A TDE_1761 c92b9a2dd8ef2366d3bd1a0bd42d648b 96 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 19 89 1.1E-25 T 12-10-2018 IPR018656 Domain of unknown function DUF2087 TDE_1908 2d0635bf5e8c8f484d5b6de1b65edcdd 319 Gene3D G3DSA:2.170.120.40 137 219 1.3E-8 T 12-10-2018 TDE_1908 2d0635bf5e8c8f484d5b6de1b65edcdd 319 Gene3D G3DSA:2.170.120.30 37 136 1.3E-15 T 12-10-2018 TDE_1908 2d0635bf5e8c8f484d5b6de1b65edcdd 319 Gene3D G3DSA:2.170.120.30 224 318 4.0E-9 T 12-10-2018 TDE_1908 2d0635bf5e8c8f484d5b6de1b65edcdd 319 Pfam PF07949 YbbR-like protein 47 128 1.0E-10 T 12-10-2018 IPR012505 YbbR-like TDE_1908 2d0635bf5e8c8f484d5b6de1b65edcdd 319 Pfam PF07949 YbbR-like protein 136 213 6.8E-9 T 12-10-2018 IPR012505 YbbR-like TDE_0701 f72114e45ae9ecf84f31fa48891a14ad 242 PIRSF PIRSF006648 1 242 3.9E-22 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TDE_0701 f72114e45ae9ecf84f31fa48891a14ad 242 Pfam PF01061 ABC-2 type transporter 3 210 3.3E-27 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TDE_0701 f72114e45ae9ecf84f31fa48891a14ad 242 PRINTS PR00164 ABC-2 type transport system membrane protein signature 169 188 1.4E-8 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TDE_0701 f72114e45ae9ecf84f31fa48891a14ad 242 PRINTS PR00164 ABC-2 type transport system membrane protein signature 132 156 1.4E-8 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TDE_0701 f72114e45ae9ecf84f31fa48891a14ad 242 PRINTS PR00164 ABC-2 type transport system membrane protein signature 189 208 1.4E-8 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TDE_2613 d8dbe18e7e723c95f855096c1b511580 134 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 29 128 3.5E-36 T 12-10-2018 IPR019287 Holliday junction resolvase-related domain TDE_2383 ac18f8a4e8c2aafcc590915a20212ac8 260 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 260 32.826 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TDE_2383 ac18f8a4e8c2aafcc590915a20212ac8 260 Pfam PF02654 Cobalamin-5-phosphate synthase 7 250 9.4E-47 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TDE_2383 ac18f8a4e8c2aafcc590915a20212ac8 260 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 6 251 1.5E-36 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TDE_1110 315aec1b9832bc64d2f765ed3adc4996 439 SUPERFAMILY SSF52058 121 361 8.16E-28 T 12-10-2018 TDE_1110 315aec1b9832bc64d2f765ed3adc4996 439 Pfam PF12799 Leucine Rich repeats (2 copies) 298 334 2.5E-7 T 12-10-2018 IPR025875 Leucine rich repeat 4 TDE_1110 315aec1b9832bc64d2f765ed3adc4996 439 Gene3D G3DSA:3.80.10.10 77 407 3.4E-43 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0918 4a8b3d532fe0b915d27c58b7ae3cf796 1208 SUPERFAMILY SSF52540 39 355 4.98E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2506 908375f3992effdb14452dba90b57197 331 Pfam PF04055 Radical SAM superfamily 64 173 1.6E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_2506 908375f3992effdb14452dba90b57197 331 ProSitePatterns PS01087 Radical activating enzymes signature. 57 78 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 TDE_2506 908375f3992effdb14452dba90b57197 331 SUPERFAMILY SSF102114 65 175 7.19E-11 T 12-10-2018 TDE_2506 908375f3992effdb14452dba90b57197 331 PIRSF PIRSF004869 1 328 3.4E-80 T 12-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted TDE_2506 908375f3992effdb14452dba90b57197 331 Gene3D G3DSA:3.20.20.70 54 192 3.1E-12 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2506 908375f3992effdb14452dba90b57197 331 Pfam PF13353 4Fe-4S single cluster domain 56 147 8.2E-6 T 12-10-2018 TDE_2631 a98435df1338926a759dd55fc34e857b 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 262 8.8E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_2631 a98435df1338926a759dd55fc34e857b 274 SUPERFAMILY SSF161098 67 245 6.38E-17 T 12-10-2018 IPR035906 MetI-like superfamily TDE_2631 a98435df1338926a759dd55fc34e857b 274 Gene3D G3DSA:1.10.3720.10 58 268 5.6E-13 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1019 5b2129a606e6e7a703e47f67ee7c293c 615 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 212 613 1.2E-107 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TDE_1019 5b2129a606e6e7a703e47f67ee7c293c 615 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 203 609 3.8E-75 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TDE_2208 167d33a1bfe2766463778646e7905c72 259 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 257 1.9E-53 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TDE_2208 167d33a1bfe2766463778646e7905c72 259 Gene3D G3DSA:3.40.1390.30 20 243 1.4E-73 T 12-10-2018 TDE_2208 167d33a1bfe2766463778646e7905c72 259 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 20 243 9.6E-56 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TDE_2208 167d33a1bfe2766463778646e7905c72 259 Gene3D G3DSA:3.40.1390.30 99 230 1.4E-73 T 12-10-2018 TDE_2208 167d33a1bfe2766463778646e7905c72 259 SUPERFAMILY SSF102705 1 255 6.67E-63 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily TDE_2649 b5c2a38b29417ed309af37e41b389b32 289 Gene3D G3DSA:3.40.50.300 4 252 3.7E-46 T 12-10-2018 TDE_2649 b5c2a38b29417ed309af37e41b389b32 289 SMART SM00382 34 226 4.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2649 b5c2a38b29417ed309af37e41b389b32 289 Pfam PF00005 ABC transporter 25 164 1.1E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2649 b5c2a38b29417ed309af37e41b389b32 289 SUPERFAMILY SSF52540 4 229 5.43E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0955 f30e898cb82b50c4938128389758de50 202 Gene3D G3DSA:1.20.1440.20 23 202 3.2E-69 T 12-10-2018 IPR023353 LemA-like domain superfamily TDE_0955 f30e898cb82b50c4938128389758de50 202 Pfam PF04011 LemA family 11 202 3.9E-73 T 12-10-2018 IPR007156 LemA TDE_0955 f30e898cb82b50c4938128389758de50 202 SUPERFAMILY SSF140478 33 192 3.92E-58 T 12-10-2018 IPR023353 LemA-like domain superfamily TDE_2028 2b59911be21ea5f6a69350fafcee4873 1338 Pfam PF13860 FlgD Ig-like domain 485 534 8.5E-10 T 12-10-2018 IPR025965 FlgD Ig-like domain TDE_2028 2b59911be21ea5f6a69350fafcee4873 1338 Pfam PF00691 OmpA family 1236 1323 2.1E-14 T 12-10-2018 IPR006665 OmpA-like domain TDE_2028 2b59911be21ea5f6a69350fafcee4873 1338 Gene3D G3DSA:3.30.1330.60 1201 1338 1.2E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_2028 2b59911be21ea5f6a69350fafcee4873 1338 Pfam PF13750 Bacterial Ig-like domain (group 3) 413 460 0.0056 T 12-10-2018 IPR022038 Bacterial Ig-like domain TDE_2028 2b59911be21ea5f6a69350fafcee4873 1338 SUPERFAMILY SSF103088 1235 1335 5.49E-21 T 12-10-2018 IPR036737 OmpA-like domain superfamily TDE_2028 2b59911be21ea5f6a69350fafcee4873 1338 Gene3D G3DSA:2.60.40.4070 335 434 2.5E-8 T 12-10-2018 TDE_2028 2b59911be21ea5f6a69350fafcee4873 1338 Gene3D G3DSA:2.60.40.4070 911 978 1.2E-6 T 12-10-2018 TDE_2028 2b59911be21ea5f6a69350fafcee4873 1338 Gene3D G3DSA:2.60.40.4070 465 543 2.3E-13 T 12-10-2018 TDE_2028 2b59911be21ea5f6a69350fafcee4873 1338 Gene3D G3DSA:2.60.40.4070 578 650 2.5E-6 T 12-10-2018 TDE_2184 d8fb67a053b5d19839ea996d02ba9a8d 726 SUPERFAMILY SSF69304 398 592 3.01E-12 T 12-10-2018 TDE_2184 d8fb67a053b5d19839ea996d02ba9a8d 726 Gene3D G3DSA:2.130.10.10 70 319 1.7E-14 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TDE_2184 d8fb67a053b5d19839ea996d02ba9a8d 726 SUPERFAMILY SSF50978 137 466 6.41E-20 T 12-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 TDE_1188 e70406c36e41bdc3034e3f835f83a6be 682 Gene3D G3DSA:3.40.50.1220 505 682 4.2E-74 T 12-10-2018 TDE_1188 e70406c36e41bdc3034e3f835f83a6be 682 Gene3D G3DSA:3.40.50.1220 301 488 4.8E-74 T 12-10-2018 TDE_1188 e70406c36e41bdc3034e3f835f83a6be 682 SUPERFAMILY SSF52467 521 682 7.77E-59 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TDE_1188 e70406c36e41bdc3034e3f835f83a6be 682 SUPERFAMILY SSF52467 326 486 1.9E-58 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TDE_1188 e70406c36e41bdc3034e3f835f83a6be 682 Pfam PF02233 NAD(P) transhydrogenase beta subunit 11 482 5.1E-155 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 TDE_1188 e70406c36e41bdc3034e3f835f83a6be 682 Pfam PF02233 NAD(P) transhydrogenase beta subunit 497 680 8.7E-80 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 TDE_2678 3013f273f099f33ebb6e0d23cf18b357 1201 Pfam PF00128 Alpha amylase, catalytic domain 340 701 1.2E-10 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TDE_2678 3013f273f099f33ebb6e0d23cf18b357 1201 SUPERFAMILY SSF51445 332 800 9.38E-59 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily TDE_1743 f2c29319f752925767fc578f67a53ece 187 Pfam PF02417 Chromate transporter 6 183 9.7E-39 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TDE_0115 e29ac5b7473cd9855a3985e73bba41bb 215 Pfam PF06226 Protein of unknown function (DUF1007) 10 214 1.7E-44 T 12-10-2018 IPR010412 Protein of unknown function DUF1007 TDE_0948 6ebed4330efc40ab014fa6ae65cfb2cb 292 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 292 9.9E-15 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_0948 6ebed4330efc40ab014fa6ae65cfb2cb 292 Pfam PF04754 Putative transposase, YhgA-like 67 143 1.4E-6 T 12-10-2018 IPR006842 Transposase (putative), YhgA-like TDE_0374 1abfb7e4f4de275bd43f6403f9ad41ed 428 SUPERFAMILY SSF53756 5 422 5.38E-44 T 12-10-2018 TDE_0374 1abfb7e4f4de275bd43f6403f9ad41ed 428 Gene3D G3DSA:3.40.50.2000 226 424 2.2E-23 T 12-10-2018 TDE_0374 1abfb7e4f4de275bd43f6403f9ad41ed 428 Pfam PF00534 Glycosyl transferases group 1 226 346 4.3E-18 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 TDE_0374 1abfb7e4f4de275bd43f6403f9ad41ed 428 Pfam PF13439 Glycosyltransferase Family 4 15 216 4.6E-7 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SUPERFAMILY SSF48452 184 505 3.42E-31 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SUPERFAMILY SSF48452 44 215 2.09E-37 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Gene3D G3DSA:1.25.40.10 2 113 6.3E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Gene3D G3DSA:1.25.40.10 283 353 4.4E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Pfam PF00515 Tetratricopeptide repeat 113 144 3.1E-8 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 242 403 7.6E-5 T 12-10-2018 IPR015374 Chs5p-Arf1p binding TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Pfam PF13181 Tetratricopeptide repeat 182 211 0.0029 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Pfam PF13181 Tetratricopeptide repeat 419 450 0.0019 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Pfam PF13181 Tetratricopeptide repeat 45 76 0.021 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Pfam PF13181 Tetratricopeptide repeat 147 178 0.18 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Pfam PF13181 Tetratricopeptide repeat 78 110 0.032 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 77 110 0.0034 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 179 212 0.063 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 247 280 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 213 246 49.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 145 178 3.3E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 43 76 18.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 383 416 470.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 111 144 5.7E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 417 450 0.053 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 SMART SM00028 349 382 57.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Gene3D G3DSA:1.25.40.10 354 521 1.2E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0447 db4c309c76dce652e5cb28b334d5c891 992 Gene3D G3DSA:1.25.40.10 114 279 8.7E-40 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0891 4511e683ac6ff4ea4d4c6c54d1bd686e 306 PIRSF PIRSF016838 1 54 3.6E-5 T 12-10-2018 IPR028349 Protein PafC TDE_0891 4511e683ac6ff4ea4d4c6c54d1bd686e 306 PIRSF PIRSF016838 79 306 1.0E-16 T 12-10-2018 IPR028349 Protein PafC TDE_0891 4511e683ac6ff4ea4d4c6c54d1bd686e 306 Gene3D G3DSA:1.10.10.10 1 62 1.2E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0891 4511e683ac6ff4ea4d4c6c54d1bd686e 306 SUPERFAMILY SSF46785 2 61 7.57E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0891 4511e683ac6ff4ea4d4c6c54d1bd686e 306 Pfam PF08279 HTH domain 5 59 6.5E-13 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 TDE_0891 4511e683ac6ff4ea4d4c6c54d1bd686e 306 Pfam PF13280 WYL domain 135 299 2.8E-26 T 12-10-2018 IPR026881 WYL domain TDE_0891 4511e683ac6ff4ea4d4c6c54d1bd686e 306 SMART SM00420 5 61 0.0024 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TDE_1397 148a88805bb718aee6bd599e980c04bc 388 Gene3D G3DSA:3.40.50.300 9 193 3.0E-30 T 12-10-2018 TDE_1397 148a88805bb718aee6bd599e980c04bc 388 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 14 274 8.0E-18 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TDE_1397 148a88805bb718aee6bd599e980c04bc 388 Gene3D G3DSA:3.40.50.300 194 318 5.3E-7 T 12-10-2018 TDE_1397 148a88805bb718aee6bd599e980c04bc 388 SUPERFAMILY SSF52540 9 302 4.53E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1008 2f9d4afbdf19349390d3ce65da60af5d 206 Pfam PF10135 Rod binding protein 146 192 6.8E-12 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal TDE_0415 9022c338e37d6eafa4315365ace949ac 422 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 414 5.2E-181 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_0415 9022c338e37d6eafa4315365ace949ac 422 TIGRFAM TIGR01781 Trep_dent_lipo: Treponema denticola clustered lipoprotein 2 414 2.8E-189 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_1750 ac52e82620c18f2f38ffa097c80a15e8 128 SUPERFAMILY SSF118010 3 127 2.22E-15 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily TDE_1750 ac52e82620c18f2f38ffa097c80a15e8 128 Gene3D G3DSA:3.30.70.1490 1 128 4.1E-13 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily TDE_1750 ac52e82620c18f2f38ffa097c80a15e8 128 Pfam PF04327 Cysteine protease Prp 2 123 1.1E-23 T 12-10-2018 IPR007422 Cysteine protease Prp TDE_2105 c4c1f945daca51a7aeefac67a4640046 92 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 16 90 2.0E-15 T 12-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system TDE_2110 38ed02de2cb6a7de9e8971bcf5292c38 300 SUPERFAMILY SSF51366 3 280 7.07E-44 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TDE_2110 38ed02de2cb6a7de9e8971bcf5292c38 300 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 78 242 5.1E-15 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_2110 38ed02de2cb6a7de9e8971bcf5292c38 300 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 5 254 4.8E-43 T 12-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TDE_2110 38ed02de2cb6a7de9e8971bcf5292c38 300 SMART SM00934 17 272 1.1E-5 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TDE_2110 38ed02de2cb6a7de9e8971bcf5292c38 300 Gene3D G3DSA:3.20.20.70 1 293 6.1E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_1651 600256d4dd52235080e4753e01cebfc0 203 Gene3D G3DSA:1.10.1760.20 6 198 4.8E-45 T 12-10-2018 TDE_1651 600256d4dd52235080e4753e01cebfc0 203 Pfam PF02632 BioY family 34 191 2.7E-33 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TDE_1651 600256d4dd52235080e4753e01cebfc0 203 PIRSF PIRSF016661 2 199 4.1E-29 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TDE_1722 2521820388cf9b5ba7cd80510beb3c6c 117 SUPERFAMILY SSF50891 5 113 6.45E-5 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily TDE_1722 2521820388cf9b5ba7cd80510beb3c6c 117 Gene3D G3DSA:2.40.100.20 4 114 1.2E-5 T 12-10-2018 TDE_0972 b7b08bcd3c98592eecb3fa105d439d42 284 SUPERFAMILY SSF53271 115 282 2.17E-14 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like TDE_0972 b7b08bcd3c98592eecb3fa105d439d42 284 Gene3D G3DSA:3.40.50.2020 147 284 1.9E-10 T 12-10-2018 TDE_0874 b865fb0efb6a3d97a3776850fbd026e5 171 Pfam PF04079 Segregation and condensation complex subunit ScpB 2 159 1.1E-53 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TDE_0874 b865fb0efb6a3d97a3776850fbd026e5 171 Gene3D G3DSA:1.10.10.10 1 75 5.1E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0874 b865fb0efb6a3d97a3776850fbd026e5 171 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 2 167 3.4E-39 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TDE_0874 b865fb0efb6a3d97a3776850fbd026e5 171 SUPERFAMILY SSF46785 77 150 1.42E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0874 b865fb0efb6a3d97a3776850fbd026e5 171 SUPERFAMILY SSF46785 2 69 2.62E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0874 b865fb0efb6a3d97a3776850fbd026e5 171 PIRSF PIRSF019345 1 169 9.3E-53 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TDE_0874 b865fb0efb6a3d97a3776850fbd026e5 171 Gene3D G3DSA:1.10.10.10 76 168 1.7E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0927 ba54b743a82d7e77c015b04550de4364 289 SUPERFAMILY SSF161098 93 282 4.32E-24 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0927 ba54b743a82d7e77c015b04550de4364 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 288 7.6E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0927 ba54b743a82d7e77c015b04550de4364 289 Gene3D G3DSA:1.10.3720.10 88 288 2.4E-24 T 12-10-2018 IPR035906 MetI-like superfamily TDE_2315 2df0da4a09c4150270d66a4d92efd851 275 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 36 258 27.608 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TDE_2315 2df0da4a09c4150270d66a4d92efd851 275 SUPERFAMILY SSF51419 29 257 2.09E-73 T 12-10-2018 IPR029066 PLP-binding barrel TDE_2315 2df0da4a09c4150270d66a4d92efd851 275 Pfam PF01168 Alanine racemase, N-terminal domain 36 259 3.0E-22 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TDE_2315 2df0da4a09c4150270d66a4d92efd851 275 PIRSF PIRSF004848 5 265 2.6E-94 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TDE_2315 2df0da4a09c4150270d66a4d92efd851 275 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 33 259 1.2E-56 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TDE_2315 2df0da4a09c4150270d66a4d92efd851 275 Gene3D G3DSA:3.20.20.10 20 270 5.8E-90 T 12-10-2018 IPR029066 PLP-binding barrel TDE_1860 23fe7aa4ca2896a1bca639ba50907d39 176 Pfam PF08006 Protein of unknown function (DUF1700) 1 169 1.5E-19 T 12-10-2018 IPR012963 Protein of unknown function DUF1700 TDE_2673 400b4dd6a6b12fabd336b2b331b23e5a 235 Pfam PF10895 Domain of unknown function (DUF2715) 44 235 2.9E-9 T 12-10-2018 IPR024471 Protein of unknown function DUF2715 TDE_2766 f0d79afd638c31c177dfad667ceb6d47 259 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site TDE_2766 f0d79afd638c31c177dfad667ceb6d47 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 218 9.7E-23 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TDE_2378 e4233eb1efc4c191585fc912680f1282 312 Gene3D G3DSA:3.40.50.300 1 241 8.2E-74 T 12-10-2018 TDE_2378 e4233eb1efc4c191585fc912680f1282 312 Pfam PF00005 ABC transporter 19 162 3.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_2378 e4233eb1efc4c191585fc912680f1282 312 SMART SM00382 28 211 3.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2378 e4233eb1efc4c191585fc912680f1282 312 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2378 e4233eb1efc4c191585fc912680f1282 312 SUPERFAMILY SSF52540 3 229 1.55E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2479 4e62d799706a12c0f1046b1ea12a28b5 129 Pfam PF01627 Hpt domain 22 106 6.5E-8 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TDE_2479 4e62d799706a12c0f1046b1ea12a28b5 129 Gene3D G3DSA:1.20.120.160 1 129 5.7E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 TDE_2479 4e62d799706a12c0f1046b1ea12a28b5 129 SUPERFAMILY SSF47226 2 111 1.53E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 TDE_2135 032573517635dc623471969ecd7f6a4f 250 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 216 1.0E-17 T 12-10-2018 TDE_2135 032573517635dc623471969ecd7f6a4f 250 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 250 1.7E-40 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_0863 a318dd97e4eee6b26b4bd87b2068872c 227 PRINTS PR01837 MgtC/SapB protein signature 37 55 4.1E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TDE_0863 a318dd97e4eee6b26b4bd87b2068872c 227 PRINTS PR01837 MgtC/SapB protein signature 93 117 4.1E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TDE_0863 a318dd97e4eee6b26b4bd87b2068872c 227 PRINTS PR01837 MgtC/SapB protein signature 18 37 4.1E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TDE_0863 a318dd97e4eee6b26b4bd87b2068872c 227 PRINTS PR01837 MgtC/SapB protein signature 66 88 4.1E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TDE_0863 a318dd97e4eee6b26b4bd87b2068872c 227 Pfam PF02308 MgtC family 15 138 3.7E-36 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TDE_0812 2329fee8091646cf36b0ac39a650b82a 537 Pfam PF00664 ABC transporter transmembrane region 11 282 2.0E-28 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0812 2329fee8091646cf36b0ac39a650b82a 537 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 351 364 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TDE_0812 2329fee8091646cf36b0ac39a650b82a 537 SMART SM00382 347 529 3.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0812 2329fee8091646cf36b0ac39a650b82a 537 SUPERFAMILY SSF90123 1 292 1.44E-44 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0812 2329fee8091646cf36b0ac39a650b82a 537 Pfam PF00005 ABC transporter 338 481 5.3E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0812 2329fee8091646cf36b0ac39a650b82a 537 SUPERFAMILY SSF52540 321 527 8.77E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0812 2329fee8091646cf36b0ac39a650b82a 537 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0812 2329fee8091646cf36b0ac39a650b82a 537 Gene3D G3DSA:3.40.50.300 319 536 4.8E-47 T 12-10-2018 TDE_0812 2329fee8091646cf36b0ac39a650b82a 537 Gene3D G3DSA:1.20.1560.10 1 313 8.3E-37 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2382 7200d997743ca592e48e70b3b1f557e4 183 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 177 4.4E-53 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TDE_2382 7200d997743ca592e48e70b3b1f557e4 183 SUPERFAMILY SSF52540 2 178 3.45E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2382 7200d997743ca592e48e70b3b1f557e4 183 Gene3D G3DSA:3.40.50.300 2 178 1.1E-56 T 12-10-2018 TDE_2382 7200d997743ca592e48e70b3b1f557e4 183 PIRSF PIRSF006135 1 180 7.0E-59 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TDE_1250 3aade0b4a2fa984c55bf38527b5b38aa 332 SUPERFAMILY SSF53300 89 289 4.9E-31 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_1250 3aade0b4a2fa984c55bf38527b5b38aa 332 Pfam PF00092 von Willebrand factor type A domain 92 282 5.6E-19 T 12-10-2018 IPR002035 von Willebrand factor, type A TDE_1250 3aade0b4a2fa984c55bf38527b5b38aa 332 Gene3D G3DSA:3.40.50.410 91 289 3.5E-45 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TDE_1250 3aade0b4a2fa984c55bf38527b5b38aa 332 SMART SM00327 89 259 3.5E-18 T 12-10-2018 IPR002035 von Willebrand factor, type A TDE_2144 a3d7676e1b53a54691aa083793e1abd4 431 PIRSF PIRSF006054 4 431 7.0E-129 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 TDE_2144 a3d7676e1b53a54691aa083793e1abd4 431 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 7 430 33.156 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 TDE_2144 a3d7676e1b53a54691aa083793e1abd4 431 Pfam PF03313 Serine dehydratase alpha chain 90 425 4.3E-56 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit TDE_2634 1481d907401fbc293d82f5b7981d6f0a 268 SUPERFAMILY SSF53335 5 146 3.77E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2634 1481d907401fbc293d82f5b7981d6f0a 268 Gene3D G3DSA:3.40.50.150 19 238 7.8E-23 T 12-10-2018 TDE_2634 1481d907401fbc293d82f5b7981d6f0a 268 Pfam PF13649 Methyltransferase domain 64 136 2.2E-14 T 12-10-2018 TDE_1336 eade076d4e4ea8fda35860d60738a056 465 Pfam PF04311 Protein of unknown function (DUF459) 233 459 4.3E-58 T 12-10-2018 IPR007407 Protein of unknown function DUF459 TDE_1336 eade076d4e4ea8fda35860d60738a056 465 SUPERFAMILY SSF52266 246 459 5.5E-14 T 12-10-2018 TDE_1336 eade076d4e4ea8fda35860d60738a056 465 Gene3D G3DSA:3.40.50.1110 222 454 2.6E-11 T 12-10-2018 IPR036514 SGNH hydrolase superfamily TDE_0657 79bafedec311ec4d99f0adac2de71256 253 Pfam PF00005 ABC transporter 26 174 3.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0657 79bafedec311ec4d99f0adac2de71256 253 Gene3D G3DSA:3.40.50.300 2 243 1.9E-63 T 12-10-2018 TDE_0657 79bafedec311ec4d99f0adac2de71256 253 SUPERFAMILY SSF52540 4 226 2.03E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0657 79bafedec311ec4d99f0adac2de71256 253 SMART SM00382 35 222 4.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2643 690ba3799015e52f068d30dec604dfd6 489 Pfam PF04324 BFD-like [2Fe-2S] binding domain 407 460 6.7E-16 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TDE_2643 690ba3799015e52f068d30dec604dfd6 489 SUPERFAMILY SSF51905 1 381 3.28E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_2643 690ba3799015e52f068d30dec604dfd6 489 Gene3D G3DSA:1.10.10.1100 395 470 4.4E-21 T 12-10-2018 TDE_2643 690ba3799015e52f068d30dec604dfd6 489 Pfam PF01266 FAD dependent oxidoreductase 3 358 1.1E-66 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TDE_2643 690ba3799015e52f068d30dec604dfd6 489 Gene3D G3DSA:3.50.50.60 3 353 7.5E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TDE_2643 690ba3799015e52f068d30dec604dfd6 489 SUPERFAMILY SSF54373 223 315 1.53E-6 T 12-10-2018 TDE_2643 690ba3799015e52f068d30dec604dfd6 489 Gene3D G3DSA:3.30.9.10 86 319 7.5E-123 T 12-10-2018 TDE_1399 07bba60d91714516c1432beba2b48fc1 338 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 22 320 5.7E-60 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TDE_1399 07bba60d91714516c1432beba2b48fc1 338 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 331 5.2E-71 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TDE_1399 07bba60d91714516c1432beba2b48fc1 338 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 326 18.425 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TDE_1399 07bba60d91714516c1432beba2b48fc1 338 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 161 173 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TDE_0249 3aa4ccbbae83010f0ce587c495d148dd 187 Gene3D G3DSA:2.30.110.10 2 187 2.4E-44 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TDE_0249 3aa4ccbbae83010f0ce587c495d148dd 187 SUPERFAMILY SSF50475 8 177 1.37E-30 T 12-10-2018 TDE_0249 3aa4ccbbae83010f0ce587c495d148dd 187 Pfam PF01613 Flavin reductase like domain 12 145 2.7E-12 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TDE_0631 b04e82ad9cc516825d1882524329e2fc 708 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 516 706 1.9E-34 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_0631 b04e82ad9cc516825d1882524329e2fc 708 Gene3D G3DSA:3.60.40.10 485 707 7.6E-44 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_0631 b04e82ad9cc516825d1882524329e2fc 708 SMART SM00331 489 707 4.8E-46 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 SUPERFAMILY SSF48452 24 366 2.2E-29 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 SMART SM00028 158 191 1.5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 SMART SM00028 319 352 33.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 SMART SM00028 90 123 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 SMART SM00028 124 157 17.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 SMART SM00028 56 89 7.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 SMART SM00028 192 225 27.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 SMART SM00028 22 55 0.01 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 SMART SM00028 260 293 23.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 Gene3D G3DSA:1.25.40.10 17 158 2.2E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 Gene3D G3DSA:1.25.40.10 159 365 2.3E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 Pfam PF14559 Tetratricopeptide repeat 36 95 3.3E-8 T 12-10-2018 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 Pfam PF13432 Tetratricopeptide repeat 163 219 8.4E-6 T 12-10-2018 TDE_1244 0d0565d589e4a780fc941a2ffe0d5103 658 Pfam PF13432 Tetratricopeptide repeat 100 140 8.7E-4 T 12-10-2018 TDE_2151 e556654053cd89dce41256e132efe3b1 155 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 143 6.2E-34 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 TDE_2151 e556654053cd89dce41256e132efe3b1 155 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 145 27.82 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 TDE_0065 8ba4f7a34d889441efb56bbdabe2222f 174 Pfam PF02643 Uncharacterized ACR, COG1430 60 162 5.7E-29 T 12-10-2018 IPR003795 Protein of unknown function DUF192 TDE_0065 8ba4f7a34d889441efb56bbdabe2222f 174 Gene3D G3DSA:2.60.120.1140 39 171 2.0E-36 T 12-10-2018 IPR038695 Saro_0823-like superfamily TDE_2530 6bef57f06616c7984823a9e58ad8e665 275 SUPERFAMILY SSF102114 2 183 1.44E-11 T 12-10-2018 TDE_2530 6bef57f06616c7984823a9e58ad8e665 275 Pfam PF04055 Radical SAM superfamily 1 166 4.7E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_2530 6bef57f06616c7984823a9e58ad8e665 275 Gene3D G3DSA:3.80.30.30 34 168 4.1E-6 T 12-10-2018 TDE_2037 3729256752e176b8e71625ce1502eb24 357 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 47 246 1.2E-47 T 12-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 TDE_2037 3729256752e176b8e71625ce1502eb24 357 Gene3D G3DSA:3.30.590.10 3 258 2.7E-44 T 12-10-2018 TDE_2037 3729256752e176b8e71625ce1502eb24 357 SUPERFAMILY SSF55931 7 265 1.26E-60 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TDE_2292 b3f2ccb61e40a53da951284040fb357d 161 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TDE_2292 b3f2ccb61e40a53da951284040fb357d 161 Pfam PF02542 YgbB family 1 154 1.8E-59 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TDE_2292 b3f2ccb61e40a53da951284040fb357d 161 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 154 2.8E-60 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TDE_2292 b3f2ccb61e40a53da951284040fb357d 161 Gene3D G3DSA:3.30.1330.50 1 161 3.5E-64 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TDE_2292 b3f2ccb61e40a53da951284040fb357d 161 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 33.906 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TDE_2292 b3f2ccb61e40a53da951284040fb357d 161 SUPERFAMILY SSF69765 1 156 6.54E-59 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TDE_0090 e90ce33c1e7b5cdb3285edbff229673c 220 Gene3D G3DSA:1.10.10.1320 1 88 1.1E-6 T 12-10-2018 TDE_0090 e90ce33c1e7b5cdb3285edbff229673c 220 Pfam PF13490 Putative zinc-finger 8 37 6.5E-6 T 12-10-2018 IPR027383 Putative zinc-finger TDE_2691 7da4da0e71eb530a78e8769eaeed2a76 142 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 2 142 3.4E-18 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_2417 01a1f74245c93a472a11bfb3fbc47a41 158 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 10 153 7.6E-14 T 12-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related TDE_2417 01a1f74245c93a472a11bfb3fbc47a41 158 Gene3D G3DSA:2.30.110.10 1 157 4.3E-40 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TDE_2417 01a1f74245c93a472a11bfb3fbc47a41 158 SUPERFAMILY SSF50475 1 155 6.24E-40 T 12-10-2018 TDE_0267 5b658856d457e5f5e209bc93e96379e8 181 SUPERFAMILY SSF52972 1 179 3.66E-43 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TDE_0267 5b658856d457e5f5e209bc93e96379e8 181 Pfam PF01725 Ham1 family 4 175 6.1E-34 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TDE_0267 5b658856d457e5f5e209bc93e96379e8 181 Gene3D G3DSA:3.90.950.10 1 181 2.6E-43 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TDE_1655 4e706b1f13e203178cce61ec151b45be 176 Pfam PF09413 Putative prokaryotic signal transducing protein 74 128 1.0E-7 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 TDE_0741 c1a6905ce49e46d64b6c1c72cd390c64 657 SUPERFAMILY SSF52058 502 591 4.15E-9 T 12-10-2018 TDE_0741 c1a6905ce49e46d64b6c1c72cd390c64 657 Gene3D G3DSA:3.80.10.10 386 643 1.2E-36 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0741 c1a6905ce49e46d64b6c1c72cd390c64 657 Pfam PF13306 Leucine rich repeats (6 copies) 502 622 4.9E-17 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_0244 2418219f834b5347e49dd0332d3b855d 574 Gene3D G3DSA:1.20.1560.10 1 319 2.8E-35 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0244 2418219f834b5347e49dd0332d3b855d 574 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0244 2418219f834b5347e49dd0332d3b855d 574 Pfam PF00005 ABC transporter 348 496 1.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0244 2418219f834b5347e49dd0332d3b855d 574 Gene3D G3DSA:3.40.50.300 322 570 1.7E-85 T 12-10-2018 TDE_0244 2418219f834b5347e49dd0332d3b855d 574 Pfam PF00664 ABC transporter transmembrane region 49 280 2.3E-15 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0244 2418219f834b5347e49dd0332d3b855d 574 SUPERFAMILY SSF52540 325 566 1.78E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0244 2418219f834b5347e49dd0332d3b855d 574 SMART SM00382 356 542 2.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0244 2418219f834b5347e49dd0332d3b855d 574 SUPERFAMILY SSF90123 3 308 1.44E-42 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_1408 63fbbc86579dbbcba98054239f03a4ed 236 Pfam PF04620 Flagellar filament outer layer protein Flaa 29 220 4.3E-57 T 12-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 TDE_0523 72647eb69e1c8c800cd14841452935b0 197 Pfam PF14025 Protein of unknown function (DUF4241) 6 191 1.2E-62 T 12-10-2018 IPR025335 Protein of unknown function DUF4241 TDE_2635 cb5c4bb340a6740db1da92d19c5a3805 166 Gene3D G3DSA:3.40.630.30 4 165 1.7E-31 T 12-10-2018 TDE_2635 cb5c4bb340a6740db1da92d19c5a3805 166 SUPERFAMILY SSF55729 1 161 5.05E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2635 cb5c4bb340a6740db1da92d19c5a3805 166 Pfam PF13420 Acetyltransferase (GNAT) domain 34 153 1.4E-13 T 12-10-2018 TDE_1854 1d6ecb57bcc6be8d74c26b622d1e50a9 107 Pfam PF01909 Nucleotidyltransferase domain 20 102 5.8E-13 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TDE_1854 1d6ecb57bcc6be8d74c26b622d1e50a9 107 Gene3D G3DSA:3.30.460.10 5 102 1.9E-20 T 12-10-2018 TDE_1854 1d6ecb57bcc6be8d74c26b622d1e50a9 107 SUPERFAMILY SSF81301 6 102 7.91E-18 T 12-10-2018 TDE_0622 fb9ee002e0050be5657c58f3b12f21ff 311 Gene3D G3DSA:3.80.30.20 23 242 1.9E-14 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TDE_0622 fb9ee002e0050be5657c58f3b12f21ff 311 Pfam PF04055 Radical SAM superfamily 20 176 2.4E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TDE_0622 fb9ee002e0050be5657c58f3b12f21ff 311 SUPERFAMILY SSF102114 15 240 2.49E-30 T 12-10-2018 TDE_0622 fb9ee002e0050be5657c58f3b12f21ff 311 SMART SM00729 15 233 7.9E-26 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TDE_0749 0762465d946102279717aa87f96f1d48 1244 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 55 1236 5.6E-266 T 12-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 TDE_0749 0762465d946102279717aa87f96f1d48 1244 Pfam PF02514 CobN/Magnesium Chelatase 116 1224 0.0 T 12-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 TDE_1870 480e272e7ceac5672a5ae52f7b561c05 278 Pfam PF02517 CAAX protease self-immunity 135 224 9.0E-21 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TDE_0276 a86d0f2e680fa828079fc7a4d1efe121 208 Pfam PF13023 HD domain 29 190 1.0E-45 T 12-10-2018 IPR006674 HD domain TDE_0276 a86d0f2e680fa828079fc7a4d1efe121 208 SUPERFAMILY SSF109604 21 197 6.28E-41 T 12-10-2018 TDE_0276 a86d0f2e680fa828079fc7a4d1efe121 208 Gene3D G3DSA:1.10.3210.10 12 208 1.3E-53 T 12-10-2018 TDE_0608 85f1102aec9f3e2d65adce60653ad517 57 SUPERFAMILY SSF46785 1 51 5.62E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0608 85f1102aec9f3e2d65adce60653ad517 57 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 40 3.2E-11 T 12-10-2018 TDE_0608 85f1102aec9f3e2d65adce60653ad517 57 Gene3D G3DSA:1.10.10.10 1 55 5.9E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_2053 b5661db22913a70d45dffb98de9e8440 144 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 4 139 7.4E-47 T 12-10-2018 TDE_2053 b5661db22913a70d45dffb98de9e8440 144 Pfam PF01592 NifU-like N terminal domain 7 99 3.3E-14 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 TDE_2053 b5661db22913a70d45dffb98de9e8440 144 Gene3D G3DSA:3.90.1010.10 1 144 4.1E-41 T 12-10-2018 TDE_2053 b5661db22913a70d45dffb98de9e8440 144 SUPERFAMILY SSF82649 1 141 2.28E-37 T 12-10-2018 TDE_2641 ee0410ae6b1c3ce3fb492481d90cca0e 328 Gene3D G3DSA:1.10.3290.10 14 265 6.9E-55 T 12-10-2018 IPR036597 Fido-like domain superfamily TDE_2641 ee0410ae6b1c3ce3fb492481d90cca0e 328 SUPERFAMILY SSF46785 269 321 6.16E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_2641 ee0410ae6b1c3ce3fb492481d90cca0e 328 Pfam PF13412 Winged helix-turn-helix DNA-binding 268 312 2.6E-8 T 12-10-2018 TDE_2641 ee0410ae6b1c3ce3fb492481d90cca0e 328 SUPERFAMILY SSF140931 79 259 5.23E-44 T 12-10-2018 IPR036597 Fido-like domain superfamily TDE_2641 ee0410ae6b1c3ce3fb492481d90cca0e 328 Gene3D G3DSA:1.10.10.10 266 319 4.4E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_2641 ee0410ae6b1c3ce3fb492481d90cca0e 328 Pfam PF02661 Fic/DOC family 100 196 1.9E-23 T 12-10-2018 IPR003812 Fido domain TDE_1689 b818efaae6cff74d05dcd075d3db460d 252 SMART SM00382 28 210 1.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_1689 b818efaae6cff74d05dcd075d3db460d 252 SUPERFAMILY SSF52540 1 224 2.72E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1689 b818efaae6cff74d05dcd075d3db460d 252 Pfam PF00005 ABC transporter 21 162 9.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1689 b818efaae6cff74d05dcd075d3db460d 252 Gene3D G3DSA:3.40.50.300 1 243 1.1E-62 T 12-10-2018 TDE_0410 219b991c3b4c57a9025e2373681fda97 288 Pfam PF01435 Peptidase family M48 99 264 2.6E-32 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TDE_0410 219b991c3b4c57a9025e2373681fda97 288 Gene3D G3DSA:3.30.2010.10 97 160 9.1E-9 T 12-10-2018 TDE_1227 a774be62c10af283e265e4be00293a41 444 Gene3D G3DSA:2.130.10.10 121 440 1.6E-94 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TDE_1227 a774be62c10af283e265e4be00293a41 444 Pfam PF10282 Lactonase, 7-bladed beta-propeller 218 372 2.0E-5 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller TDE_1227 a774be62c10af283e265e4be00293a41 444 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 234 271 1.9E-7 T 12-10-2018 IPR011964 YVTN beta-propeller repeat TDE_1227 a774be62c10af283e265e4be00293a41 444 SUPERFAMILY SSF50969 135 440 6.28E-33 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TDE_0420 ceebc523f6daaebc97ce7b6f4e0def5f 395 TIGRFAM TIGR01781 Trep_dent_lipo: Treponema denticola clustered lipoprotein 2 388 1.1E-167 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_0420 ceebc523f6daaebc97ce7b6f4e0def5f 395 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 2 388 1.5E-154 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_2546 9eec9751da6aa820a355081a4e752cc1 294 PIRSF PIRSF006483 4 294 2.3E-84 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT TDE_2546 9eec9751da6aa820a355081a4e752cc1 294 Gene3D G3DSA:3.30.70.120 206 279 1.1E-26 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TDE_2546 9eec9751da6aa820a355081a4e752cc1 294 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 232 286 1.0E-22 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 TDE_2546 9eec9751da6aa820a355081a4e752cc1 294 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 21 227 6.8E-63 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT TDE_0391 0c7297af40909fce24c36dbd7b26b39b 82 Pfam PF11823 Protein of unknown function (DUF3343) 2 68 1.4E-16 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 TDE_1438 e6ef08eb6c6aa258002365e72a22306a 356 SUPERFAMILY SSF53756 3 354 1.2E-66 T 12-10-2018 TDE_1438 e6ef08eb6c6aa258002365e72a22306a 356 Gene3D G3DSA:3.40.50.2000 167 337 3.9E-61 T 12-10-2018 TDE_1438 e6ef08eb6c6aa258002365e72a22306a 356 Pfam PF13439 Glycosyltransferase Family 4 13 169 3.0E-20 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TDE_1438 e6ef08eb6c6aa258002365e72a22306a 356 Pfam PF00534 Glycosyl transferases group 1 183 329 3.2E-22 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 TDE_1438 e6ef08eb6c6aa258002365e72a22306a 356 Gene3D G3DSA:3.40.50.2000 13 346 3.9E-61 T 12-10-2018 TDE_2406 75cfcb94cbfb3f5c003812dd60674060 488 SUPERFAMILY SSF111283 6 483 6.28E-81 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TDE_2406 75cfcb94cbfb3f5c003812dd60674060 488 Pfam PF01523 Putative modulator of DNA gyrase 24 326 6.3E-37 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TDE_2500 86e9138e6ca031062534f5f65e3155b9 184 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 179 1.1E-42 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 TDE_2500 86e9138e6ca031062534f5f65e3155b9 184 Gene3D G3DSA:3.40.50.880 1 184 1.1E-43 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_2500 86e9138e6ca031062534f5f65e3155b9 184 SUPERFAMILY SSF52317 1 179 6.74E-42 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like TDE_2500 86e9138e6ca031062534f5f65e3155b9 184 Pfam PF01965 DJ-1/PfpI family 2 166 8.7E-43 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TDE_1040 193073643a925fa4e2ac7ddffc9d0683 89 Gene3D G3DSA:1.10.287.10 1 89 6.6E-32 T 12-10-2018 TDE_1040 193073643a925fa4e2ac7ddffc9d0683 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 3.0E-40 T 12-10-2018 TDE_1040 193073643a925fa4e2ac7ddffc9d0683 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 1.5E-36 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_1040 193073643a925fa4e2ac7ddffc9d0683 89 Pfam PF00312 Ribosomal protein S15 8 88 4.2E-33 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1040 193073643a925fa4e2ac7ddffc9d0683 89 SMART SM01387 8 88 3.7E-43 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TDE_1040 193073643a925fa4e2ac7ddffc9d0683 89 SUPERFAMILY SSF47060 3 89 9.71E-31 T 12-10-2018 IPR009068 S15/NS1, RNA-binding TDE_1040 193073643a925fa4e2ac7ddffc9d0683 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.809 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_0236 2934abe3b46f20dff971ef19a0b5acec 136 Gene3D G3DSA:3.40.50.1010 2 128 1.9E-7 T 12-10-2018 TDE_0236 2934abe3b46f20dff971ef19a0b5acec 136 Pfam PF13470 PIN domain 2 117 9.7E-10 T 12-10-2018 IPR002716 PIN domain TDE_0236 2934abe3b46f20dff971ef19a0b5acec 136 SUPERFAMILY SSF88723 1 132 1.15E-17 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_2527 19306b90c023af47f364eb7c95edbc3a 256 Pfam PF04536 TPM domain 31 154 2.9E-37 T 12-10-2018 IPR007621 TPM domain TDE_2527 19306b90c023af47f364eb7c95edbc3a 256 Gene3D G3DSA:3.10.310.50 15 162 1.6E-47 T 12-10-2018 TDE_1462 168b9be3095ef48ac7cc1696750c67de 184 Gene3D G3DSA:3.90.870.10 2 183 1.3E-43 T 12-10-2018 TDE_1462 168b9be3095ef48ac7cc1696750c67de 184 Pfam PF01300 Telomere recombination 17 178 8.7E-34 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 TDE_1462 168b9be3095ef48ac7cc1696750c67de 184 SUPERFAMILY SSF55821 8 182 4.88E-39 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TDE_1784 d27697714530702489ce7ef25e205cad 280 SMART SM00871 127 278 1.5E-27 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding TDE_1784 d27697714530702489ce7ef25e205cad 280 Gene3D G3DSA:1.10.10.60 2 57 1.2E-7 T 12-10-2018 TDE_1784 d27697714530702489ce7ef25e205cad 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.7E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TDE_1784 d27697714530702489ce7ef25e205cad 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.7E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TDE_1784 d27697714530702489ce7ef25e205cad 280 SUPERFAMILY SSF55136 127 279 7.59E-31 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TDE_1784 d27697714530702489ce7ef25e205cad 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TDE_1784 d27697714530702489ce7ef25e205cad 280 SUPERFAMILY SSF46689 58 106 2.15E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TDE_1784 d27697714530702489ce7ef25e205cad 280 Pfam PF06445 GyrI-like small molecule binding domain 127 277 3.3E-23 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain TDE_1784 d27697714530702489ce7ef25e205cad 280 SMART SM00342 21 104 1.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TDE_1784 d27697714530702489ce7ef25e205cad 280 Gene3D G3DSA:1.10.10.60 58 117 2.5E-16 T 12-10-2018 TDE_1784 d27697714530702489ce7ef25e205cad 280 Gene3D G3DSA:3.20.80.10 127 280 1.1E-38 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TDE_1784 d27697714530702489ce7ef25e205cad 280 Pfam PF12833 Helix-turn-helix domain 32 105 4.2E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TDE_1632 f87e34f7a8b875141d55f4c29c95619e 289 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 222 4.1E-51 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TDE_1632 f87e34f7a8b875141d55f4c29c95619e 289 Gene3D G3DSA:3.20.20.60 1 287 7.9E-93 T 12-10-2018 TDE_1632 f87e34f7a8b875141d55f4c29c95619e 289 PIRSF PIRSF015582 1 289 2.1E-78 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like TDE_1632 f87e34f7a8b875141d55f4c29c95619e 289 SUPERFAMILY SSF51621 3 233 9.03E-55 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TDE_0044 85e472190a14625e8d31d04d9ef4ab2a 490 SUPERFAMILY SSF52540 281 483 4.74E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0044 85e472190a14625e8d31d04d9ef4ab2a 490 Gene3D G3DSA:3.40.50.300 71 236 1.3E-25 T 12-10-2018 TDE_0044 85e472190a14625e8d31d04d9ef4ab2a 490 Gene3D G3DSA:3.40.50.300 296 487 2.3E-36 T 12-10-2018 TDE_0044 85e472190a14625e8d31d04d9ef4ab2a 490 Pfam PF00005 ABC transporter 321 445 3.5E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0044 85e472190a14625e8d31d04d9ef4ab2a 490 Pfam PF00005 ABC transporter 21 144 1.9E-13 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0044 85e472190a14625e8d31d04d9ef4ab2a 490 SUPERFAMILY SSF52540 2 203 3.44E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0044 85e472190a14625e8d31d04d9ef4ab2a 490 Gene3D G3DSA:3.40.50.300 1 63 1.1E-10 T 12-10-2018 TDE_0044 85e472190a14625e8d31d04d9ef4ab2a 490 SMART SM00382 29 188 1.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0044 85e472190a14625e8d31d04d9ef4ab2a 490 SMART SM00382 328 489 1.6 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0530 ab629d63fa3f0081793eb2d72c1a16f1 146 Pfam PF15560 Immunity protein 12 1 138 8.7E-88 T 12-10-2018 IPR029088 Immunity protein 12 TDE_0372 f08c9ea20f0ef4867cd23ac67f7157f6 514 SUPERFAMILY SSF52540 320 502 4.44E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0372 f08c9ea20f0ef4867cd23ac67f7157f6 514 SUPERFAMILY SSF90123 2 297 3.4E-30 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0372 f08c9ea20f0ef4867cd23ac67f7157f6 514 Gene3D G3DSA:3.40.50.300 304 511 1.1E-33 T 12-10-2018 TDE_0372 f08c9ea20f0ef4867cd23ac67f7157f6 514 Gene3D G3DSA:1.20.1560.10 1 298 1.5E-21 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0372 f08c9ea20f0ef4867cd23ac67f7157f6 514 Pfam PF00005 ABC transporter 350 473 1.4E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1357 70f38fa76a9e62a1a70248a9b6e4dc87 351 Pfam PF01263 Aldose 1-epimerase 20 345 1.6E-78 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 TDE_1357 70f38fa76a9e62a1a70248a9b6e4dc87 351 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 TDE_1357 70f38fa76a9e62a1a70248a9b6e4dc87 351 Gene3D G3DSA:2.70.98.10 1 351 4.8E-106 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TDE_1357 70f38fa76a9e62a1a70248a9b6e4dc87 351 SUPERFAMILY SSF74650 4 349 9.42E-102 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TDE_1357 70f38fa76a9e62a1a70248a9b6e4dc87 351 PIRSF PIRSF005096 1 351 7.4E-131 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 TDE_2174 686ddf5b44df6a044d3d279e15ff45c7 311 Gene3D G3DSA:3.40.50.1820 7 272 2.3E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2174 686ddf5b44df6a044d3d279e15ff45c7 311 SUPERFAMILY SSF53474 41 260 2.29E-14 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2174 686ddf5b44df6a044d3d279e15ff45c7 311 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 71 259 1.9E-24 T 12-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal TDE_0100 1de38155c71abf0b0b9bbc18b60e774c 656 Gene3D G3DSA:2.120.10.30 2 137 3.9E-6 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TDE_0100 1de38155c71abf0b0b9bbc18b60e774c 656 SUPERFAMILY SSF82171 14 385 2.09E-15 T 12-10-2018 TDE_0100 1de38155c71abf0b0b9bbc18b60e774c 656 SUPERFAMILY SSF53474 399 655 2.78E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0100 1de38155c71abf0b0b9bbc18b60e774c 656 Pfam PF00326 Prolyl oligopeptidase family 445 655 1.2E-48 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TDE_0100 1de38155c71abf0b0b9bbc18b60e774c 656 Gene3D G3DSA:3.40.50.1820 401 656 2.1E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2541 df96f788ba0d4f6838621aa86b869597 314 Gene3D G3DSA:3.40.50.150 125 311 3.6E-42 T 12-10-2018 TDE_2541 df96f788ba0d4f6838621aa86b869597 314 Pfam PF01728 FtsJ-like methyltransferase 133 241 2.3E-6 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TDE_2541 df96f788ba0d4f6838621aa86b869597 314 SUPERFAMILY SSF53335 123 283 1.55E-14 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0412 2c857fa4b337158060e2fa434b414fd7 463 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 44 456 2.5E-178 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_0412 2c857fa4b337158060e2fa434b414fd7 463 TIGRFAM TIGR01781 Trep_dent_lipo: Treponema denticola clustered lipoprotein 41 456 7.4E-198 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_1388 83e68dd8000ff5ba4948e8941de1351e 158 Pfam PF02681 Divergent PAP2 family 11 149 3.4E-41 T 12-10-2018 IPR003832 Protein of unknown function DUF212 TDE_1649 ccdf5307330408b8a747a29cc610ebff 215 Pfam PF02361 Cobalt transport protein 30 213 7.2E-9 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_2539 805642c69904639a7fa817d4aa9bab9b 294 Gene3D G3DSA:3.40.830.10 79 280 8.3E-10 T 12-10-2018 TDE_2539 805642c69904639a7fa817d4aa9bab9b 294 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 81 232 4.4E-18 T 12-10-2018 TDE_2539 805642c69904639a7fa817d4aa9bab9b 294 Pfam PF01875 Memo-like protein 81 220 1.5E-11 T 12-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 TDE_0621 dee27f1846891f18b6b7ba5eb41f4169 460 PIRSF PIRSF006603 10 460 1.6E-80 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0621 dee27f1846891f18b6b7ba5eb41f4169 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 427 1.6E-68 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0621 dee27f1846891f18b6b7ba5eb41f4169 460 Pfam PF01554 MatE 274 417 4.6E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0621 dee27f1846891f18b6b7ba5eb41f4169 460 Pfam PF01554 MatE 30 189 7.8E-33 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0953 db21899da39170bdd4ade8df5cf9356c 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 323 1.3E-25 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TDE_2215 12c27ec31951100f8266d6fd0295362d 564 Pfam PF02653 Branched-chain amino acid transport system / permease component 260 553 2.0E-35 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TDE_1947 ad567c16dd17717832bf9bfc721906ed 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 293 1.8E-34 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TDE_0124 f073a98aebe4b0daad49dd95f8bd402a 209 SUPERFAMILY SSF144091 12 194 1.16E-39 T 12-10-2018 TDE_0124 f073a98aebe4b0daad49dd95f8bd402a 209 Gene3D G3DSA:1.20.1540.10 6 201 2.8E-32 T 12-10-2018 IPR035952 Rhomboid-like superfamily TDE_0124 f073a98aebe4b0daad49dd95f8bd402a 209 Pfam PF01694 Rhomboid family 49 196 5.5E-35 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TDE_0124 f073a98aebe4b0daad49dd95f8bd402a 209 SMART SM01160 50 137 0.0074 T 12-10-2018 TDE_0834 19adf9ab97981e55e06e7fea472121b2 190 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 2.7E-51 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TDE_0834 19adf9ab97981e55e06e7fea472121b2 190 PIRSF PIRSF006102 1 190 3.8E-58 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TDE_2093 0683649484d25c7619c467ad4ada2f26 177 Pfam PF01613 Flavin reductase like domain 59 176 1.5E-4 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 TDE_2093 0683649484d25c7619c467ad4ada2f26 177 Gene3D G3DSA:2.30.110.10 21 177 5.1E-19 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TDE_2093 0683649484d25c7619c467ad4ada2f26 177 SUPERFAMILY SSF50475 27 176 3.45E-14 T 12-10-2018 TDE_1928 7ead006d69f5004b4f4455611cafc3e7 251 Pfam PF01261 Xylose isomerase-like TIM barrel 76 211 7.1E-11 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TDE_1928 7ead006d69f5004b4f4455611cafc3e7 251 SUPERFAMILY SSF51658 5 248 1.7E-31 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily TDE_1928 7ead006d69f5004b4f4455611cafc3e7 251 Gene3D G3DSA:3.20.20.150 7 249 1.8E-30 T 12-10-2018 TDE_0413 29455fe2687e4a6908172dc9cd1af31e 316 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 70 1.3E-12 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_2588 94a6bf043f31402a39e993f8112d55e6 400 Pfam PF00665 Integrase core domain 184 293 2.0E-9 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TDE_2588 94a6bf043f31402a39e993f8112d55e6 400 Gene3D G3DSA:3.30.420.10 186 339 3.2E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TDE_2588 94a6bf043f31402a39e993f8112d55e6 400 SUPERFAMILY SSF53098 183 319 3.49E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily TDE_0051 81eae006d0056b0ab6d790b84cf79ee1 383 Gene3D G3DSA:1.20.1090.10 184 383 5.2E-21 T 12-10-2018 TDE_0051 81eae006d0056b0ab6d790b84cf79ee1 383 SUPERFAMILY SSF56796 4 382 8.9E-55 T 12-10-2018 TDE_0051 81eae006d0056b0ab6d790b84cf79ee1 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 2.4E-56 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 TDE_0051 81eae006d0056b0ab6d790b84cf79ee1 383 Gene3D G3DSA:3.40.50.1970 1 182 2.5E-24 T 12-10-2018 TDE_1296 b4b0125bcc6d093a7308dcf6385fde39 96 SUPERFAMILY SSF69754 1 95 8.89E-15 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like TDE_1296 b4b0125bcc6d093a7308dcf6385fde39 96 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 5.6E-11 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TDE_1296 b4b0125bcc6d093a7308dcf6385fde39 96 Gene3D G3DSA:3.30.160.100 1 95 1.2E-9 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like TDE_2120 ab86b54d3d58209af1b50e6b8bd51851 429 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 2 427 2.0E-203 T 12-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 TDE_2120 ab86b54d3d58209af1b50e6b8bd51851 429 PIRSF PIRSF011588 1 429 8.4E-217 T 12-10-2018 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 TDE_2660 cc84b3e812250030d0bf6e530e1632c1 119 Pfam PF12773 Double zinc ribbon 14 60 2.0E-6 T 12-10-2018 IPR025874 Double zinc ribbon TDE_0316 59bdc5e6457f9926bd68b6b5d9a40d00 529 Pfam PF00005 ABC transporter 338 485 1.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0316 59bdc5e6457f9926bd68b6b5d9a40d00 529 Pfam PF00664 ABC transporter transmembrane region 15 280 1.3E-9 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TDE_0316 59bdc5e6457f9926bd68b6b5d9a40d00 529 SUPERFAMILY SSF52540 314 516 1.51E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0316 59bdc5e6457f9926bd68b6b5d9a40d00 529 SUPERFAMILY SSF90123 2 470 3.92E-37 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0316 59bdc5e6457f9926bd68b6b5d9a40d00 529 SMART SM00382 347 529 1.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0316 59bdc5e6457f9926bd68b6b5d9a40d00 529 ProSitePatterns PS00211 ABC transporters family signature. 458 472 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0316 59bdc5e6457f9926bd68b6b5d9a40d00 529 Gene3D G3DSA:1.20.1560.10 1 306 1.1E-26 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0316 59bdc5e6457f9926bd68b6b5d9a40d00 529 Gene3D G3DSA:3.40.50.300 314 528 7.6E-64 T 12-10-2018 TDE_1065 41433047ecd476383c86cf48d8f42d75 162 SUPERFAMILY SSF52218 25 105 2.06E-9 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_1065 41433047ecd476383c86cf48d8f42d75 162 Gene3D G3DSA:3.40.50.360 9 159 1.8E-12 T 12-10-2018 IPR029039 Flavoprotein-like superfamily TDE_2522 f4dcd52996adedcb13811f01aa4bac3d 608 Gene3D G3DSA:3.40.50.300 346 607 9.0E-73 T 12-10-2018 TDE_2522 f4dcd52996adedcb13811f01aa4bac3d 608 SUPERFAMILY SSF90123 15 318 4.32E-11 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_2522 f4dcd52996adedcb13811f01aa4bac3d 608 SMART SM00382 380 568 1.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2522 f4dcd52996adedcb13811f01aa4bac3d 608 SUPERFAMILY SSF52540 351 593 6.88E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2522 f4dcd52996adedcb13811f01aa4bac3d 608 Pfam PF00005 ABC transporter 372 523 7.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0862 5b7d5bd5a438a7adc5614220e974195c 284 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 239 1.9E-72 T 12-10-2018 TDE_0862 5b7d5bd5a438a7adc5614220e974195c 284 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 284 1.1E-45 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_2293 1c072bc44d5c4ecaa09acef39bb48eec 1081 Gene3D G3DSA:1.20.5.1230 138 325 2.4E-5 T 12-10-2018 TDE_2293 1c072bc44d5c4ecaa09acef39bb48eec 1081 Gene3D G3DSA:1.20.5.1230 452 630 9.3E-6 T 12-10-2018 TDE_2293 1c072bc44d5c4ecaa09acef39bb48eec 1081 Gene3D G3DSA:1.20.120.20 646 792 1.8E-6 T 12-10-2018 TDE_2293 1c072bc44d5c4ecaa09acef39bb48eec 1081 SUPERFAMILY SSF58113 139 318 1.31E-6 T 12-10-2018 TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 PIRSF PIRSF002869 9 536 5.4E-167 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 PRINTS PR01806 Virulence factor MviN signature 375 394 9.3E-53 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 PRINTS PR01806 Virulence factor MviN signature 172 193 9.3E-53 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 PRINTS PR01806 Virulence factor MviN signature 277 303 9.3E-53 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 PRINTS PR01806 Virulence factor MviN signature 44 63 9.3E-53 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 PRINTS PR01806 Virulence factor MviN signature 427 444 9.3E-53 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 PRINTS PR01806 Virulence factor MviN signature 148 172 9.3E-53 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 PRINTS PR01806 Virulence factor MviN signature 63 79 9.3E-53 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 14 476 16.957 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 Pfam PF03023 MviN-like protein 39 482 1.9E-108 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0342 6ad2a2d40be5abea5757eda121d73f65 537 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 13 530 1.6E-120 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TDE_0678 b5d389102c16112cfdce6615488a315e 114 Pfam PF11823 Protein of unknown function (DUF3343) 4 98 1.9E-34 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 TDE_2436 a98c041801eae21e1eb32d6820c3569a 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 253 3.4E-45 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_2436 a98c041801eae21e1eb32d6820c3569a 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 226 3.9E-20 T 12-10-2018 TDE_1020 8fc41cebb3771de56e7c4d4a36a8672c 342 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 317 4.4E-41 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TDE_1020 8fc41cebb3771de56e7c4d4a36a8672c 342 Gene3D G3DSA:3.40.190.170 16 341 1.7E-53 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TDE_0561 52cc8b43af7a39e6a118cc7e712f285d 132 Pfam PF15580 Immunity protein 53 5 99 4.0E-26 T 12-10-2018 IPR028228 Immunity protein 53 TDE_2757 dec267f22383c73e7de88e43c9e8ee75 102 SUPERFAMILY SSF81301 4 99 2.77E-21 T 12-10-2018 TDE_2757 dec267f22383c73e7de88e43c9e8ee75 102 Gene3D G3DSA:3.30.460.10 4 97 7.5E-23 T 12-10-2018 TDE_2757 dec267f22383c73e7de88e43c9e8ee75 102 Pfam PF01909 Nucleotidyltransferase domain 18 97 3.9E-11 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TDE_0026 72da3b76c64b599e4ef664c4f851c6ca 396 Pfam PF01963 TraB family 15 234 1.4E-37 T 12-10-2018 IPR002816 Pheromone shutdown, TraB TDE_0026 72da3b76c64b599e4ef664c4f851c6ca 396 TIGRFAM TIGR00261 traB: TraB family protein 15 392 1.1E-109 T 12-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal TDE_1945 890d02974982b8e93b647b83049b158a 108 SUPERFAMILY SSF75169 3 103 1.88E-8 T 12-10-2018 IPR027396 DsrEFH-like TDE_1945 890d02974982b8e93b647b83049b158a 108 Gene3D G3DSA:3.40.1260.10 3 105 1.9E-10 T 12-10-2018 IPR027396 DsrEFH-like TDE_0639 544d3513b0623444b0a154b8dfdc8642 313 Gene3D G3DSA:1.10.3720.10 89 304 6.4E-22 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0639 544d3513b0623444b0a154b8dfdc8642 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 305 9.3E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_0639 544d3513b0623444b0a154b8dfdc8642 313 SUPERFAMILY SSF161098 92 288 1.18E-18 T 12-10-2018 IPR035906 MetI-like superfamily TDE_0431 1ba2eb390818795787b5fef45eeec807 374 SMART SM00257 16 69 2.1E-9 T 12-10-2018 IPR018392 LysM domain TDE_0431 1ba2eb390818795787b5fef45eeec807 374 Pfam PF01476 LysM domain 17 67 9.7E-10 T 12-10-2018 IPR018392 LysM domain TDE_0431 1ba2eb390818795787b5fef45eeec807 374 Gene3D G3DSA:3.10.350.10 16 67 1.0E-12 T 12-10-2018 IPR036779 LysM domain superfamily TDE_1457 1309e5d289a5aaa9b6041c8a898ff93b 507 Pfam PF01973 Protein of unknown function DUF115 199 368 6.9E-37 T 12-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TDE_2498 532cbac460c17b0b5d40970a39b35381 255 Pfam PF00753 Metallo-beta-lactamase superfamily 32 225 2.8E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_2498 532cbac460c17b0b5d40970a39b35381 255 SUPERFAMILY SSF56281 7 232 4.33E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_2498 532cbac460c17b0b5d40970a39b35381 255 Gene3D G3DSA:3.60.15.10 9 243 2.3E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TDE_2498 532cbac460c17b0b5d40970a39b35381 255 SMART SM00849 34 225 1.4E-19 T 12-10-2018 IPR001279 Metallo-beta-lactamase TDE_2405 8b043dbe534fd2de46bd443710ad56e5 444 SUPERFAMILY SSF111283 3 442 1.15E-68 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TDE_2405 8b043dbe534fd2de46bd443710ad56e5 444 Pfam PF01523 Putative modulator of DNA gyrase 27 304 1.2E-23 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TDE_2528 113765fbc7e19b6f30255e3ca00eca19 230 Gene3D G3DSA:3.10.310.50 113 226 5.7E-34 T 12-10-2018 TDE_0959 fd0cabffb199af9cce104bb465ea5567 116 Gene3D G3DSA:2.60.320.10 32 116 5.4E-12 T 12-10-2018 IPR038690 NusG, domain 2 superfamily TDE_0959 fd0cabffb199af9cce104bb465ea5567 116 SUPERFAMILY SSF82004 59 109 4.58E-5 T 12-10-2018 TDE_0959 fd0cabffb199af9cce104bb465ea5567 116 Pfam PF07009 NusG domain II 17 115 1.5E-11 T 12-10-2018 IPR024045 NusG, domain 2 TDE_2442 6d889343217bfc5fea5182c3b4fc7883 231 Gene3D G3DSA:3.80.10.10 135 222 3.5E-18 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2442 6d889343217bfc5fea5182c3b4fc7883 231 Gene3D G3DSA:3.80.10.10 22 134 1.5E-24 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2442 6d889343217bfc5fea5182c3b4fc7883 231 Pfam PF13306 Leucine rich repeats (6 copies) 91 214 2.2E-30 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_2442 6d889343217bfc5fea5182c3b4fc7883 231 SUPERFAMILY SSF52058 62 201 1.02E-13 T 12-10-2018 TDE_2519 81cf00cfc838e70eaf2ad99b9bc5b3c8 536 Gene3D G3DSA:3.40.50.300 25 211 3.8E-5 T 12-10-2018 TDE_2519 81cf00cfc838e70eaf2ad99b9bc5b3c8 536 Pfam PF08011 PD-(D/E)XK nuclease superfamily 437 530 1.1E-24 T 12-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 TDE_2519 81cf00cfc838e70eaf2ad99b9bc5b3c8 536 Pfam PF09820 Predicted AAA-ATPase 8 291 4.1E-104 T 12-10-2018 IPR018631 AAA-ATPase-like domain TDE_1072 d2a7b0b65d7f5a7fc5c92fe274f95c5d 871 SUPERFAMILY SSF53850 37 391 2.9E-28 T 12-10-2018 TDE_1072 d2a7b0b65d7f5a7fc5c92fe274f95c5d 871 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 39 287 4.3E-16 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain TDE_1072 d2a7b0b65d7f5a7fc5c92fe274f95c5d 871 Gene3D G3DSA:3.10.105.10 95 364 5.6E-21 T 12-10-2018 TDE_1072 d2a7b0b65d7f5a7fc5c92fe274f95c5d 871 Gene3D G3DSA:3.40.190.10 39 372 5.6E-21 T 12-10-2018 TDE_2740 4d89c3d769fb6ff449528e1815616b4f 162 Pfam PF01420 Type I restriction modification DNA specificity domain 4 156 5.4E-19 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TDE_2740 4d89c3d769fb6ff449528e1815616b4f 162 Gene3D G3DSA:3.90.220.20 1 160 4.9E-36 T 12-10-2018 TDE_2740 4d89c3d769fb6ff449528e1815616b4f 162 SUPERFAMILY SSF116734 2 160 1.62E-31 T 12-10-2018 TDE_0978 1f75d03fca0a233562c2bcadd860422b 158 Pfam PF13306 Leucine rich repeats (6 copies) 2 126 2.3E-19 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_0978 1f75d03fca0a233562c2bcadd860422b 158 SUPERFAMILY SSF52058 3 104 5.36E-8 T 12-10-2018 TDE_0978 1f75d03fca0a233562c2bcadd860422b 158 Gene3D G3DSA:3.80.10.10 1 158 3.0E-32 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2045 beaa4f30de916ff90b88e1cfb03f6ecb 106 SUPERFAMILY SSF52172 43 100 8.4E-6 T 12-10-2018 IPR011006 CheY-like superfamily TDE_2785 5bc47f2c7edae5994c23d8a5af6e3a21 193 Pfam PF02325 YGGT family 12 77 1.7E-16 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 TDE_2432 a0c259dbe63e9c76ea0da75984f9b4f4 356 ProDom PD416840 MEMBRANE A ANTIGEN TREPONEMAL TMPA PRECURSOR PALMITATE SIGNAL LIPOPROTEIN PROTEIN 70 343 2.0E-145 T 12-10-2018 TDE_2432 a0c259dbe63e9c76ea0da75984f9b4f4 356 SUPERFAMILY SSF48452 94 292 4.83E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1989 743ce269d708245304940315577da293 252 SUPERFAMILY SSF69593 59 244 3.14E-21 T 12-10-2018 TDE_1989 743ce269d708245304940315577da293 252 Pfam PF01553 Acyltransferase 70 185 2.0E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TDE_1989 743ce269d708245304940315577da293 252 SMART SM00563 74 193 6.2E-19 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TDE_2381 eb5d57f7d41da09c5b2da5728beb6e8f 382 SUPERFAMILY SSF55874 249 375 1.04E-11 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_2381 eb5d57f7d41da09c5b2da5728beb6e8f 382 Pfam PF07730 Histidine kinase 184 249 4.3E-15 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 TDE_2381 eb5d57f7d41da09c5b2da5728beb6e8f 382 Gene3D G3DSA:3.30.565.10 261 376 3.9E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0258 0d77a1841c1349f495cd457636585c35 250 Gene3D G3DSA:3.40.50.150 4 233 4.2E-41 T 12-10-2018 TDE_0258 0d77a1841c1349f495cd457636585c35 250 Pfam PF13649 Methyltransferase domain 48 142 2.4E-21 T 12-10-2018 TDE_0258 0d77a1841c1349f495cd457636585c35 250 SUPERFAMILY SSF53335 9 232 3.8E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2709 9a94328120c16c050e2dae6191c4e79a 1554 Gene3D G3DSA:2.60.40.10 930 1022 1.7E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_2709 9a94328120c16c050e2dae6191c4e79a 1554 Gene3D G3DSA:2.60.40.10 80 173 3.3E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_2709 9a94328120c16c050e2dae6191c4e79a 1554 SUPERFAMILY SSF81296 945 1009 2.94E-6 T 12-10-2018 IPR014756 Immunoglobulin E-set TDE_0811 5e0dc9df738d1f8b7e3167d381a6bf8c 455 PIRSF PIRSF006603 1 454 4.4E-65 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0811 5e0dc9df738d1f8b7e3167d381a6bf8c 455 Pfam PF01554 MatE 25 185 4.0E-19 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_0811 5e0dc9df738d1f8b7e3167d381a6bf8c 455 Pfam PF01554 MatE 246 406 5.5E-12 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_1789 6d34db3d4940ece45bc71e2d16ef31c1 91 SUPERFAMILY SSF47413 20 88 2.13E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_1789 6d34db3d4940ece45bc71e2d16ef31c1 91 Gene3D G3DSA:1.10.260.40 12 90 2.3E-5 T 12-10-2018 TDE_2646 4cc216a5b64485a144ab057e6c80f583 200 Gene3D G3DSA:3.40.50.300 1 200 4.2E-47 T 12-10-2018 TDE_2646 4cc216a5b64485a144ab057e6c80f583 200 SUPERFAMILY SSF52540 12 199 9.74E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2646 4cc216a5b64485a144ab057e6c80f583 200 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_2646 4cc216a5b64485a144ab057e6c80f583 200 SMART SM00382 29 199 1.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_2646 4cc216a5b64485a144ab057e6c80f583 200 Pfam PF00005 ABC transporter 21 154 2.6E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_1724 e46ba07d3b3f9ebafc8809d7589a5731 176 SUPERFAMILY SSF142913 13 175 7.32E-55 T 12-10-2018 TDE_1724 e46ba07d3b3f9ebafc8809d7589a5731 176 Gene3D G3DSA:3.30.930.10 7 174 1.7E-15 T 12-10-2018 TDE_1918 03179653d25869d15a0c95243ed7700e 317 Gene3D G3DSA:3.90.550.10 20 232 7.1E-12 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1918 03179653d25869d15a0c95243ed7700e 317 SUPERFAMILY SSF53448 27 236 2.21E-15 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1709 ea6cfc93d490f90a09abdb6da6d68920 106 Pfam PF00216 Bacterial DNA-binding protein 6 95 1.2E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TDE_1709 ea6cfc93d490f90a09abdb6da6d68920 106 SMART SM00411 5 96 1.1E-14 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TDE_1709 ea6cfc93d490f90a09abdb6da6d68920 106 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 6.8E-8 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TDE_1709 ea6cfc93d490f90a09abdb6da6d68920 106 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 6.8E-8 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TDE_1709 ea6cfc93d490f90a09abdb6da6d68920 106 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 6.8E-8 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TDE_1709 ea6cfc93d490f90a09abdb6da6d68920 106 SUPERFAMILY SSF47729 7 101 4.71E-18 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TDE_1709 ea6cfc93d490f90a09abdb6da6d68920 106 Gene3D G3DSA:4.10.520.10 1 100 3.0E-22 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TDE_2343 d102f132e0fe1aacdcf4a63c039cc698 285 Pfam PF01148 Cytidylyltransferase family 8 279 2.4E-48 T 12-10-2018 TDE_2668 31a74aa4c73cfe930c4ebbe490095c5d 506 SUPERFAMILY SSF53383 16 496 2.23E-149 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TDE_2668 31a74aa4c73cfe930c4ebbe490095c5d 506 PIRSF PIRSF000412 9 498 8.9E-178 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TDE_2668 31a74aa4c73cfe930c4ebbe490095c5d 506 Pfam PF00464 Serine hydroxymethyltransferase 33 134 6.1E-30 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TDE_2668 31a74aa4c73cfe930c4ebbe490095c5d 506 Pfam PF00464 Serine hydroxymethyltransferase 175 447 3.0E-93 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TDE_2668 31a74aa4c73cfe930c4ebbe490095c5d 506 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 29 494 43.546 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TDE_2668 31a74aa4c73cfe930c4ebbe490095c5d 506 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 286 302 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TDE_0009 32c4ee74f4ea9575e1f952126bb59ebb 273 Gene3D G3DSA:3.40.50.300 1 185 2.7E-39 T 12-10-2018 TDE_0009 32c4ee74f4ea9575e1f952126bb59ebb 273 Pfam PF13189 Cytidylate kinase-like family 3 167 3.0E-34 T 12-10-2018 TDE_1406 f7a210bbca746ec06d9cdab54847a1a7 233 Pfam PF10719 Late competence development protein ComFB 4 91 1.3E-20 T 12-10-2018 IPR019657 Late competence development protein ComFB TDE_1465 b54a537f941cd448437aef230a87bd5b 233 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 25 227 5.2E-24 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_1465 b54a537f941cd448437aef230a87bd5b 233 Gene3D G3DSA:2.10.109.10 109 232 2.6E-20 T 12-10-2018 TDE_1465 b54a537f941cd448437aef230a87bd5b 233 SUPERFAMILY SSF51306 39 233 1.57E-27 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TDE_1465 b54a537f941cd448437aef230a87bd5b 233 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 120 132 1.2E-11 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_1465 b54a537f941cd448437aef230a87bd5b 233 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 40 56 1.2E-11 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_1465 b54a537f941cd448437aef230a87bd5b 233 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 186 205 1.2E-11 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TDE_1891 8b6548e712f656a9a7fdef0d7359608b 254 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 254 1.3E-43 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_1891 8b6548e712f656a9a7fdef0d7359608b 254 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 225 1.7E-16 T 12-10-2018 TDE_2091 cf66cae9c8d0087ead2793811387103c 277 SMART SM00062 47 271 1.5E-48 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TDE_2091 cf66cae9c8d0087ead2793811387103c 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 269 3.2E-50 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TDE_2091 cf66cae9c8d0087ead2793811387103c 277 Gene3D G3DSA:3.40.190.10 133 227 4.4E-50 T 12-10-2018 TDE_2091 cf66cae9c8d0087ead2793811387103c 277 SUPERFAMILY SSF53850 11 271 7.25E-47 T 12-10-2018 TDE_2091 cf66cae9c8d0087ead2793811387103c 277 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 70 83 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site TDE_2091 cf66cae9c8d0087ead2793811387103c 277 Gene3D G3DSA:3.40.190.10 48 269 4.4E-50 T 12-10-2018 TDE_2526 f177eb0120f556fc427058d1e6dc5a50 482 SUPERFAMILY SSF54534 185 285 2.29E-8 T 12-10-2018 TDE_0878 f3a70029b4a0dde9221669f86df19539 65 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 47 2.1E-17 T 12-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB TDE_2713 03b836c38ad7cbc1c7a0c212d3b4ad8c 255 SUPERFAMILY SSF75217 97 248 8.5E-31 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases TDE_2713 03b836c38ad7cbc1c7a0c212d3b4ad8c 255 SUPERFAMILY SSF55315 7 79 3.41E-11 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like TDE_2713 03b836c38ad7cbc1c7a0c212d3b4ad8c 255 SMART SM00967 10 85 4.8E-11 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TDE_2713 03b836c38ad7cbc1c7a0c212d3b4ad8c 255 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 11 84 1.8E-15 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TDE_2713 03b836c38ad7cbc1c7a0c212d3b4ad8c 255 Pfam PF00588 SpoU rRNA Methylase family 102 245 2.2E-33 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TDE_2713 03b836c38ad7cbc1c7a0c212d3b4ad8c 255 Gene3D G3DSA:3.30.1330.30 2 80 2.3E-8 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like TDE_2713 03b836c38ad7cbc1c7a0c212d3b4ad8c 255 Gene3D G3DSA:3.40.1280.10 87 251 1.3E-37 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TDE_1878 d48165bf1921723fca94a5a54f8192f1 261 SUPERFAMILY SSF56784 26 256 1.12E-28 T 12-10-2018 IPR036412 HAD-like superfamily TDE_1878 d48165bf1921723fca94a5a54f8192f1 261 Pfam PF13419 Haloacid dehalogenase-like hydrolase 27 224 4.6E-14 T 12-10-2018 TDE_1878 d48165bf1921723fca94a5a54f8192f1 261 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 136 220 4.6E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TDE_1878 d48165bf1921723fca94a5a54f8192f1 261 Gene3D G3DSA:1.10.150.520 38 124 2.2E-27 T 12-10-2018 TDE_1878 d48165bf1921723fca94a5a54f8192f1 261 Gene3D G3DSA:3.40.50.1000 26 250 2.2E-27 T 12-10-2018 IPR023214 HAD superfamily TDE_2457 22ccba0c419d9b5d3b9a98e8a4c30bfd 290 Gene3D G3DSA:3.80.10.10 99 288 7.8E-13 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2457 22ccba0c419d9b5d3b9a98e8a4c30bfd 290 Pfam PF13306 Leucine rich repeats (6 copies) 183 265 2.1E-7 T 12-10-2018 IPR026906 Leucine rich repeat 5 TDE_0835 dd2356bb887a8e0151e2037434d93e27 219 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 195 24.525 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 TDE_0835 dd2356bb887a8e0151e2037434d93e27 219 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 185 6.0E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TDE_0835 dd2356bb887a8e0151e2037434d93e27 219 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 5 188 3.0E-64 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 TDE_0835 dd2356bb887a8e0151e2037434d93e27 219 PIRSF PIRSF006102 1 204 1.8E-76 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TDE_0880 3b400c5d9f1c5ff5f9ac6f8af25fa98c 360 Gene3D G3DSA:3.40.50.10210 57 329 3.1E-109 T 12-10-2018 TDE_0880 3b400c5d9f1c5ff5f9ac6f8af25fa98c 360 Gene3D G3DSA:1.10.1610.10 11 336 3.1E-109 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TDE_0880 3b400c5d9f1c5ff5f9ac6f8af25fa98c 360 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 16 345 2.6E-115 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TDE_0880 3b400c5d9f1c5ff5f9ac6f8af25fa98c 360 SUPERFAMILY SSF52733 5 347 2.22E-98 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TDE_0880 3b400c5d9f1c5ff5f9ac6f8af25fa98c 360 Pfam PF02277 Phosphoribosyltransferase 11 344 1.1E-102 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TDE_0973 4d26b0be3cb46b6fd3009614ee87c327 225 Gene3D G3DSA:3.40.140.10 97 221 1.2E-40 T 12-10-2018 TDE_0973 4d26b0be3cb46b6fd3009614ee87c327 225 Pfam PF04002 RadC-like JAB domain 101 219 6.5E-41 T 12-10-2018 IPR025657 RadC-like JAB domain TDE_0973 4d26b0be3cb46b6fd3009614ee87c327 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 170 175 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site TDE_0973 4d26b0be3cb46b6fd3009614ee87c327 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 220 1.7E-56 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 TDE_0698 a64bc23803ce92f42ecf99371eb752e0 137 Pfam PF13470 PIN domain 2 115 2.9E-14 T 12-10-2018 IPR002716 PIN domain TDE_0698 a64bc23803ce92f42ecf99371eb752e0 137 Gene3D G3DSA:3.40.50.1010 1 126 4.7E-9 T 12-10-2018 TDE_0698 a64bc23803ce92f42ecf99371eb752e0 137 SUPERFAMILY SSF88723 1 131 8.69E-17 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_2689 c566fd9c1a682c238c60515ebebca6e1 130 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 119 1.5E-23 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_2689 c566fd9c1a682c238c60515ebebca6e1 130 Pfam PF12784 PD-(D/E)XK nuclease family transposase 15 119 7.4E-16 T 12-10-2018 TDE_2389 90ac7beebd3e54bc79d811e28d7548d3 357 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 16 317 1.1E-65 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TDE_2389 90ac7beebd3e54bc79d811e28d7548d3 357 Pfam PF03186 CobD/Cbib protein 21 331 2.6E-97 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TDE_2389 90ac7beebd3e54bc79d811e28d7548d3 357 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 353 79.795 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TDE_1691 017095a00652e47e035a90f02c23a96f 288 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 288 1.6E-45 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_1691 017095a00652e47e035a90f02c23a96f 288 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 237 8.1E-72 T 12-10-2018 TDE_2340 51c78368597d085eee1a4f95f92574c7 120 SMART SM00900 39 113 1.7E-15 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TDE_2340 51c78368597d085eee1a4f95f92574c7 120 Gene3D G3DSA:3.90.1010.20 23 119 3.9E-8 T 12-10-2018 TDE_2340 51c78368597d085eee1a4f95f92574c7 120 Pfam PF04205 FMN-binding domain 42 111 1.2E-14 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TDE_1467 bbcb188cadc497d9b303af99780053eb 386 Pfam PF13487 HD domain 260 320 3.9E-15 T 12-10-2018 TDE_1467 bbcb188cadc497d9b303af99780053eb 386 Gene3D G3DSA:1.10.3210.10 180 383 6.1E-63 T 12-10-2018 TDE_1467 bbcb188cadc497d9b303af99780053eb 386 SUPERFAMILY SSF109604 191 368 2.2E-31 T 12-10-2018 TDE_0196 05f1e461a84d9388f1cd815998b7480c 64 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 45 6.2E-14 T 12-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB TDE_1212 60d9df2fbd2a37e61a9f66a94f7ef19a 139 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 8 139 8.0E-36 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TDE_1212 60d9df2fbd2a37e61a9f66a94f7ef19a 139 PIRSF PIRSF002889 2 139 1.3E-20 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TDE_1212 60d9df2fbd2a37e61a9f66a94f7ef19a 139 Pfam PF00460 Flagella basal body rod protein 15 40 5.7E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TDE_1212 60d9df2fbd2a37e61a9f66a94f7ef19a 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 16 36 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TDE_0312 7cedc09bd54b82ba342603024ab759b9 574 Pfam PF02386 Cation transport protein 126 562 3.9E-82 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 TDE_0312 7cedc09bd54b82ba342603024ab759b9 574 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 148 545 2.9E-107 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 TDE_2256 8d88b41772eea27296df989bb30da938 393 Pfam PF07907 YibE/F-like protein 149 386 2.2E-84 T 12-10-2018 IPR012507 YibE/F-like TDE_2401 6a9703bb4e91b4dfb213f1665a2e0160 378 SUPERFAMILY SSF51735 1 317 5.08E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily TDE_2401 6a9703bb4e91b4dfb213f1665a2e0160 378 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 243 1.4E-26 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TDE_2401 6a9703bb4e91b4dfb213f1665a2e0160 378 Gene3D G3DSA:3.40.50.720 1 320 1.3E-108 T 12-10-2018 TDE_1508 e40be27091de3640f1f3d78575cbf188 131 Pfam PF14387 Domain of unknown function (DUF4418) 11 124 9.7E-33 T 12-10-2018 IPR025531 Protein of unknown function DUF4418 TDE_0301 aeaab130e98ded860df1a8d4646a10bc 267 Pfam PF04072 Leucine carboxyl methyltransferase 46 167 3.3E-9 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 TDE_0301 aeaab130e98ded860df1a8d4646a10bc 267 PIRSF PIRSF028177 1 267 4.1E-56 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 TDE_0301 aeaab130e98ded860df1a8d4646a10bc 267 Gene3D G3DSA:3.40.50.150 2 226 1.8E-21 T 12-10-2018 TDE_0301 aeaab130e98ded860df1a8d4646a10bc 267 SUPERFAMILY SSF53335 13 221 2.41E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0233 27c817d8aa85b3a682ceeb0a46a0ad13 377 Pfam PF13784 Fic/DOC family N-terminal 39 118 3.0E-22 T 12-10-2018 IPR025758 Fic/DOC N-terminal TDE_0233 27c817d8aa85b3a682ceeb0a46a0ad13 377 Pfam PF02661 Fic/DOC family 124 229 1.7E-20 T 12-10-2018 IPR003812 Fido domain TDE_0233 27c817d8aa85b3a682ceeb0a46a0ad13 377 SUPERFAMILY SSF140931 102 294 2.88E-44 T 12-10-2018 IPR036597 Fido-like domain superfamily TDE_0233 27c817d8aa85b3a682ceeb0a46a0ad13 377 Gene3D G3DSA:1.10.3290.10 59 301 8.9E-55 T 12-10-2018 IPR036597 Fido-like domain superfamily TDE_0233 27c817d8aa85b3a682ceeb0a46a0ad13 377 PIRSF PIRSF038925 12 377 3.3E-106 T 12-10-2018 IPR026287 Adenosine monophosphate-protein transferase TDE_2322 35caef93ec19b779cec5dd13e62778d7 158 Pfam PF03748 Flagellar basal body-associated protein FliL 84 156 1.8E-8 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 TDE_1859 2c370ad4bdba80fe616de6a8e7b407b9 397 Pfam PF08006 Protein of unknown function (DUF1700) 1 74 6.3E-10 T 12-10-2018 IPR012963 Protein of unknown function DUF1700 TDE_1859 2c370ad4bdba80fe616de6a8e7b407b9 397 Pfam PF13349 Putative adhesin 81 259 2.3E-19 T 12-10-2018 IPR025164 Putative adhesin TDE_2771 d57a79ca7ec786181bce3463b1c1e3ea 283 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 226 2.4E-47 T 12-10-2018 TDE_1046 9774b211091f3661776253c36d8a2347 116 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 98 3.0E-51 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA TDE_1046 9774b211091f3661776253c36d8a2347 116 Pfam PF11756 Nitrous oxide-stimulated promoter 5 108 8.1E-32 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA TDE_2761 2d4c9f42df8c318830979c6706352a1b 219 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 84 153 7.6E-17 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 TDE_2761 2d4c9f42df8c318830979c6706352a1b 219 Pfam PF04347 Flagellar biosynthesis protein, FliO 109 185 1.1E-9 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 TDE_0421 de31e52783a067a56875ebac28c1f5c4 428 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 413 1.9E-178 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_0421 de31e52783a067a56875ebac28c1f5c4 428 TIGRFAM TIGR01781 Trep_dent_lipo: Treponema denticola clustered lipoprotein 1 413 3.1E-159 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_0637 8ffa32e0ab9358f2595e82f6ebfd8c61 332 SMART SM00382 33 234 2.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain TDE_0637 8ffa32e0ab9358f2595e82f6ebfd8c61 332 SUPERFAMILY SSF52540 35 322 2.78E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0637 8ffa32e0ab9358f2595e82f6ebfd8c61 332 Gene3D G3DSA:3.40.50.300 2 331 1.2E-91 T 12-10-2018 TDE_0637 8ffa32e0ab9358f2595e82f6ebfd8c61 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 321 1.9E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_0637 8ffa32e0ab9358f2595e82f6ebfd8c61 332 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TDE_0637 8ffa32e0ab9358f2595e82f6ebfd8c61 332 Pfam PF00005 ABC transporter 25 184 9.0E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TDE_0637 8ffa32e0ab9358f2595e82f6ebfd8c61 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 6.8E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TDE_1115 2e5c56de74c6eee54e779f4b0ce6c348 102 SMART SM00530 42 96 1.1E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1115 2e5c56de74c6eee54e779f4b0ce6c348 102 SUPERFAMILY SSF47413 43 87 2.17E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_1115 2e5c56de74c6eee54e779f4b0ce6c348 102 Gene3D G3DSA:1.10.260.40 42 102 1.0E-18 T 12-10-2018 TDE_1115 2e5c56de74c6eee54e779f4b0ce6c348 102 Pfam PF01381 Helix-turn-helix 43 85 3.6E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_0911 65ce05ab590d8cb9c33dc72347922df2 258 Pfam PF09520 Type II restriction endonuclease, TdeIII 5 243 2.5E-94 T 12-10-2018 IPR019045 Restriction endonuclease, type II, TdeIII GO:0003677|GO:0009036|GO:0009307 TDE_2551 81ff51b0c5d2e98277f4ecb0c32d5138 356 Pfam PF10974 Protein of unknown function (DUF2804) 21 352 2.9E-49 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 TDE_2764 a73caf2f30d0e3f492546df00b5c094b 181 Pfam PF03748 Flagellar basal body-associated protein FliL 102 176 1.4E-6 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 TDE_0801 7440fb7568395a5b1492fd7867b66a65 144 SUPERFAMILY SSF46785 3 138 1.85E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_0801 7440fb7568395a5b1492fd7867b66a65 144 Gene3D G3DSA:1.10.10.10 1 142 3.8E-47 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_0801 7440fb7568395a5b1492fd7867b66a65 144 Pfam PF02082 Transcriptional regulator 1 82 1.7E-20 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type TDE_1581 8a1fe3d5dee48d476bbf6c57754c0bfe 172 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 10 139 4.9E-10 T 12-10-2018 IPR018639 Domain of unknown function DUF2062 TDE_1581 8a1fe3d5dee48d476bbf6c57754c0bfe 172 TIGRFAM TIGR03546 TIGR03546: TIGR03546 family protein 3 152 5.1E-55 T 12-10-2018 IPR019935 Conserved hypothetical protein CHP03546 TDE_1440 c0c8c4d98006f64635e90da1b8ea3817 291 SUPERFAMILY SSF53448 1 276 1.44E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1440 c0c8c4d98006f64635e90da1b8ea3817 291 Gene3D G3DSA:3.90.550.10 1 291 4.3E-78 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TDE_1440 c0c8c4d98006f64635e90da1b8ea3817 291 Pfam PF00483 Nucleotidyl transferase 2 241 5.0E-64 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TDE_1440 c0c8c4d98006f64635e90da1b8ea3817 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 288 6.7E-137 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 TDE_0650 cdc8abe0fdb7acfac45968b7bfa6744b 344 Pfam PF13303 Phosphotransferase system, EIIC 23 342 8.3E-108 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 TDE_0728 14637fc865ecde0debdbe17635b61d34 281 SUPERFAMILY SSF56176 9 174 1.12E-34 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TDE_0728 14637fc865ecde0debdbe17635b61d34 281 Gene3D G3DSA:3.30.465.10 6 176 4.5E-30 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TDE_0728 14637fc865ecde0debdbe17635b61d34 281 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 10 175 1.2E-38 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 TDE_1679 13f2107da273e898ff5278b5239f2d2a 140 Gene3D G3DSA:1.20.120.610 1 140 1.6E-16 T 12-10-2018 TDE_1679 13f2107da273e898ff5278b5239f2d2a 140 SUPERFAMILY SSF81333 74 138 1.11E-11 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TDE_1679 13f2107da273e898ff5278b5239f2d2a 140 Pfam PF00137 ATP synthase subunit C 80 138 3.7E-10 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TDE_1679 13f2107da273e898ff5278b5239f2d2a 140 Pfam PF00137 ATP synthase subunit C 6 65 6.5E-5 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TDE_1281 980531629272f6482e846eefe63393fd 90 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 33 81 1.0E-14 T 12-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system TDE_0553 bdb402e153355366e2fbf104e3d56953 299 Pfam PF14080 Domain of unknown function (DUF4261) 209 290 2.1E-28 T 12-10-2018 IPR025357 Domain of unknown function DUF4261 TDE_2217 a0e8219343cf795d452196923478b909 403 Pfam PF13407 Periplasmic binding protein domain 36 260 7.4E-26 T 12-10-2018 IPR025997 Periplasmic binding protein TDE_2217 a0e8219343cf795d452196923478b909 403 Gene3D G3DSA:3.40.50.2300 72 254 2.1E-31 T 12-10-2018 TDE_2217 a0e8219343cf795d452196923478b909 403 SUPERFAMILY SSF53822 18 272 4.19E-31 T 12-10-2018 IPR028082 Periplasmic binding protein-like I TDE_1173 9978351f234ad7d86cd03c7aa64f4198 354 Pfam PF13102 Phage integrase SAM-like domain 79 156 3.1E-8 T 12-10-2018 IPR025269 Phage integrase SAM-like domain TDE_1173 9978351f234ad7d86cd03c7aa64f4198 354 Gene3D G3DSA:1.10.150.130 69 164 4.2E-8 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal TDE_1173 9978351f234ad7d86cd03c7aa64f4198 354 Pfam PF00589 Phage integrase family 173 336 1.7E-27 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TDE_1173 9978351f234ad7d86cd03c7aa64f4198 354 SUPERFAMILY SSF56349 90 343 2.5E-49 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TDE_1173 9978351f234ad7d86cd03c7aa64f4198 354 Gene3D G3DSA:1.10.443.10 165 347 2.9E-36 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TDE_1002 e664fb0ebf2d234f0b349e4a1f224204 230 Pfam PF09335 SNARE associated Golgi protein 75 192 1.2E-15 T 12-10-2018 IPR032816 SNARE associated Golgi protein TDE_2578 7ce56a2cd9c0ebaf068c326a914a8164 84 SUPERFAMILY SSF47598 3 52 4.31E-5 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TDE_2266 96658954637a7e91a0eb0c4b1581b555 328 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 71 263 1.7E-17 T 12-10-2018 IPR000477 Reverse transcriptase domain TDE_2266 96658954637a7e91a0eb0c4b1581b555 328 SUPERFAMILY SSF56672 36 288 6.67E-28 T 12-10-2018 TDE_1873 6c9ffeab72707d12259539d7ba0f78ac 288 Pfam PF02517 CAAX protease self-immunity 144 233 4.0E-21 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TDE_2745 ac235616f38c602a57036cc3bc9c02fa 271 SUPERFAMILY SSF140931 72 267 1.83E-31 T 12-10-2018 IPR036597 Fido-like domain superfamily TDE_2745 ac235616f38c602a57036cc3bc9c02fa 271 Pfam PF02661 Fic/DOC family 95 208 2.8E-20 T 12-10-2018 IPR003812 Fido domain TDE_2745 ac235616f38c602a57036cc3bc9c02fa 271 Gene3D G3DSA:1.10.3290.10 7 268 2.9E-51 T 12-10-2018 IPR036597 Fido-like domain superfamily TDE_2113 41960823b4dfe51b2000ce8a30243105 248 Pfam PF13346 ABC-2 family transporter protein 16 206 4.5E-9 T 12-10-2018 IPR025699 ABC-2 membrane transporter-like TDE_1220 d14fbe770d689fda25c0ba065666ab82 810 SMART SM00028 477 510 16.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1220 d14fbe770d689fda25c0ba065666ab82 810 SMART SM00028 517 550 61.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1220 d14fbe770d689fda25c0ba065666ab82 810 SMART SM00028 557 590 15.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1220 d14fbe770d689fda25c0ba065666ab82 810 SUPERFAMILY SSF48452 473 611 5.75E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1220 d14fbe770d689fda25c0ba065666ab82 810 Gene3D G3DSA:1.25.40.10 424 588 3.1E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1973 09e6eec8649bdbfd4d00aee7cb8f3c1e 155 Pfam PF02674 Colicin V production protein 7 145 1.6E-27 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 TDE_1930 17ebe4d875350267a505328acc0c269b 374 SUPERFAMILY SSF69322 135 247 1.02E-7 T 12-10-2018 TDE_2022 65927d348196e58409d37d2aed0fe3fc 1488 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 171 224 4.8E-11 T 12-10-2018 IPR022045 Insecticide toxin TcdB middle/N-terminal TDE_2022 65927d348196e58409d37d2aed0fe3fc 1488 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1193 1298 4.2E-17 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 TDE_2022 65927d348196e58409d37d2aed0fe3fc 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 418 443 0.0031 T 12-10-2018 IPR006530 YD repeat TDE_2022 65927d348196e58409d37d2aed0fe3fc 1488 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 565 591 2.3E-4 T 12-10-2018 IPR006530 YD repeat TDE_2147 d83e5e405727954d0b3058c14b11086a 153 SUPERFAMILY SSF48452 42 109 3.8E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2147 d83e5e405727954d0b3058c14b11086a 153 Gene3D G3DSA:1.25.40.10 38 152 8.0E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0985 a9d70ab5d269cf6dd54bbd6956e3a592 645 SUPERFAMILY SSF53850 85 596 1.52E-81 T 12-10-2018 TDE_0985 a9d70ab5d269cf6dd54bbd6956e3a592 645 PIRSF PIRSF002741 66 597 3.0E-57 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TDE_0985 a9d70ab5d269cf6dd54bbd6956e3a592 645 Gene3D G3DSA:3.10.105.10 355 578 3.2E-42 T 12-10-2018 TDE_0985 a9d70ab5d269cf6dd54bbd6956e3a592 645 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 132 518 1.2E-53 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain TDE_0985 a9d70ab5d269cf6dd54bbd6956e3a592 645 Gene3D G3DSA:3.40.190.10 71 354 1.3E-36 T 12-10-2018 TDE_2703 8d6b2415f0058f02f2d1345cd0dc12bf 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 257 3.4E-63 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TDE_2703 8d6b2415f0058f02f2d1345cd0dc12bf 261 Gene3D G3DSA:2.50.20.10 24 258 4.4E-72 T 12-10-2018 TDE_0436 269c0665d349fd19eb7494ead53d9432 269 SUPERFAMILY SSF57863 87 254 5.75E-19 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger TDE_0436 269c0665d349fd19eb7494ead53d9432 269 Pfam PF02565 Recombination protein O C terminal 131 262 5.9E-10 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TDE_0042 64aac96faa3e2e1dc1f6d763cabbb1c4 335 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 328 1.9E-113 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TDE_0042 64aac96faa3e2e1dc1f6d763cabbb1c4 335 Gene3D G3DSA:3.40.50.10950 9 332 5.1E-124 T 12-10-2018 TDE_0042 64aac96faa3e2e1dc1f6d763cabbb1c4 335 SUPERFAMILY SSF53659 1 332 2.75E-87 T 12-10-2018 TDE_0042 64aac96faa3e2e1dc1f6d763cabbb1c4 335 Gene3D G3DSA:3.40.50.10750 143 305 5.1E-124 T 12-10-2018 TDE_0042 64aac96faa3e2e1dc1f6d763cabbb1c4 335 PIRSF PIRSF000428 1 335 1.4E-109 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TDE_0042 64aac96faa3e2e1dc1f6d763cabbb1c4 335 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 329 2.1E-121 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TDE_0909 a3e3ae9160731fa3706242b99248acfd 535 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 160 180 2.6E-6 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TDE_0909 a3e3ae9160731fa3706242b99248acfd 535 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 137 155 2.6E-6 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TDE_0909 a3e3ae9160731fa3706242b99248acfd 535 Gene3D G3DSA:3.40.50.150 38 200 1.2E-20 T 12-10-2018 TDE_0909 a3e3ae9160731fa3706242b99248acfd 535 Pfam PF01555 DNA methylase 71 170 1.0E-13 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 TDE_0909 a3e3ae9160731fa3706242b99248acfd 535 SUPERFAMILY SSF53335 104 446 2.64E-11 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0909 a3e3ae9160731fa3706242b99248acfd 535 SUPERFAMILY SSF53335 58 181 2.18E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 Gene3D G3DSA:1.10.10.250 74 142 4.9E-26 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 Gene3D G3DSA:3.30.1550.10 3 73 3.3E-30 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 1.3E-21 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 SUPERFAMILY SSF54747 3 86 7.06E-28 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 142 1.3E-60 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 143 29.593 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 SUPERFAMILY SSF46906 69 142 9.29E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 SMART SM00649 10 142 1.3E-79 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 68 5.6E-28 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal TDE_2425 d9bd1c165ae25b3e005e889f6792122e 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 39 75 3.0E-15 T 12-10-2018 TDE_1903 ea00954efc576bfa284d2a92ecb56e34 212 Pfam PF13346 ABC-2 family transporter protein 3 208 8.2E-30 T 12-10-2018 IPR025699 ABC-2 membrane transporter-like TDE_0459 dad27bb6edf8aca631077f9620dea91a 259 Pfam PF12671 Putative amidase domain 111 245 7.7E-14 T 12-10-2018 IPR024301 Putative amidase domain TDE_0849 f0ba49d7ed8e0622bb3c74d120dfb379 216 Hamap MF_02088 Probable queuosine precursor transporter. 1 203 17.01 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TDE_0849 f0ba49d7ed8e0622bb3c74d120dfb379 216 Pfam PF02592 Putative vitamin uptake transporter 32 190 1.9E-46 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TDE_0849 f0ba49d7ed8e0622bb3c74d120dfb379 216 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 8 197 3.1E-36 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TDE_2572 42625281e55289ccc9cde0ef8318f3df 197 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 192 2.5E-37 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TDE_2572 42625281e55289ccc9cde0ef8318f3df 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TDE_2572 42625281e55289ccc9cde0ef8318f3df 197 PIRSF PIRSF000847 1 197 3.4E-52 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TDE_2572 42625281e55289ccc9cde0ef8318f3df 197 Gene3D G3DSA:1.20.120.1760 4 195 2.8E-8 T 12-10-2018 TDE_2572 42625281e55289ccc9cde0ef8318f3df 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 3.9E-12 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TDE_0021 f56e548a258cd2cd1ceaf26828c13cc8 333 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 83 105 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TDE_0021 f56e548a258cd2cd1ceaf26828c13cc8 333 Gene3D G3DSA:1.20.120.1760 9 179 1.3E-13 T 12-10-2018 TDE_0021 f56e548a258cd2cd1ceaf26828c13cc8 333 Pfam PF01066 CDP-alcohol phosphatidyltransferase 36 105 6.9E-12 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TDE_1698 f18831a74514b2879631fd9a49b3cbcd 282 Gene3D G3DSA:3.60.21.10 38 273 4.7E-22 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like TDE_1698 f18831a74514b2879631fd9a49b3cbcd 282 Pfam PF00149 Calcineurin-like phosphoesterase 58 240 6.1E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TDE_1698 f18831a74514b2879631fd9a49b3cbcd 282 SUPERFAMILY SSF56300 55 276 2.89E-35 T 12-10-2018 TDE_2301 198041160d1b5c0b7b98aa7c871b71f6 87 Pfam PF01312 FlhB HrpN YscU SpaS Family 11 82 2.2E-18 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TDE_2301 198041160d1b5c0b7b98aa7c871b71f6 87 SUPERFAMILY SSF160544 10 85 2.35E-19 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TDE_2301 198041160d1b5c0b7b98aa7c871b71f6 87 Gene3D G3DSA:3.40.1690.10 9 87 1.2E-21 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TDE_1086 1712fef64f68a99ac332f64f4b016f38 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 1.9E-63 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 TDE_1086 1712fef64f68a99ac332f64f4b016f38 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.3E-30 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 TDE_1086 1712fef64f68a99ac332f64f4b016f38 288 Pfam PF03755 YicC-like family, N-terminal region 1 153 1.1E-31 T 12-10-2018 IPR013527 YicC-like, N-terminal TDE_2280 2386c49c291afcb9d1ee2759f939fa16 688 Gene3D G3DSA:1.10.530.10 522 683 8.0E-43 T 12-10-2018 TDE_2280 2386c49c291afcb9d1ee2759f939fa16 688 Pfam PF01464 Transglycosylase SLT domain 533 643 8.4E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 TDE_2280 2386c49c291afcb9d1ee2759f939fa16 688 SUPERFAMILY SSF53955 527 673 1.34E-40 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily TDE_2719 c1e4cf74e48c9ff1f7214bb210340bf7 296 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 295 1.3E-47 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_2719 c1e4cf74e48c9ff1f7214bb210340bf7 296 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 239 3.6E-74 T 12-10-2018 TDE_1347 ce1b2b088db5ab86e30418b062d64c98 275 Pfam PF02591 C4-type zinc ribbon domain 199 231 3.2E-12 T 12-10-2018 IPR003743 C4-type zinc ribbon domain TDE_1070 6ca8989dced3897f5a1b80092d483c68 341 SUPERFAMILY SSF161098 116 325 1.28E-16 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1070 6ca8989dced3897f5a1b80092d483c68 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 337 5.6E-40 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TDE_1070 6ca8989dced3897f5a1b80092d483c68 341 Gene3D G3DSA:1.10.3720.10 113 328 1.9E-19 T 12-10-2018 IPR035906 MetI-like superfamily TDE_1159 18913e4c4d71d4f6ddd4662d26a7b48c 130 SUPERFAMILY SSF75217 28 127 2.38E-6 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases TDE_0466 1f65b26780376980a37dd14906a1a81e 69 Pfam PF10047 Protein of unknown function (DUF2281) 5 68 6.9E-17 T 12-10-2018 IPR018739 Domain of unknown function DUF2281 TDE_1398 d0071ef12d9c04c6455afc9960792078 728 Pfam PF03961 Flagellar Assembly Protein A 83 272 1.4E-11 T 12-10-2018 IPR005646 Flagellar assembly protein A TDE_1398 d0071ef12d9c04c6455afc9960792078 728 Pfam PF03961 Flagellar Assembly Protein A 289 711 1.8E-82 T 12-10-2018 IPR005646 Flagellar assembly protein A TDE_2255 ebf12f4e5515614a59d346dcab4a36f6 170 Pfam PF13529 Peptidase_C39 like family 5 119 2.0E-8 T 12-10-2018 IPR039564 Peptidase C39-like TDE_2255 ebf12f4e5515614a59d346dcab4a36f6 170 Gene3D G3DSA:3.90.70.10 8 166 1.1E-8 T 12-10-2018 TDE_1546 ebc71dca8d0d5d867e61b4b43f8de419 731 SUPERFAMILY SSF51126 464 656 5.76E-6 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor TDE_1546 ebc71dca8d0d5d867e61b4b43f8de419 731 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 123 184 2.3E-7 T 12-10-2018 TDE_1214 ddc2e1ab5de2fe7ced1eb8cb5552e7b7 121 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 22 121 1.2E-14 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TDE_1214 ddc2e1ab5de2fe7ced1eb8cb5552e7b7 121 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 11 121 12.587 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TDE_1214 ddc2e1ab5de2fe7ced1eb8cb5552e7b7 121 Pfam PF02049 Flagellar hook-basal body complex protein FliE 44 118 8.5E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TDE_1214 ddc2e1ab5de2fe7ced1eb8cb5552e7b7 121 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 86 102 6.0E-5 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TDE_1214 ddc2e1ab5de2fe7ced1eb8cb5552e7b7 121 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 51 67 6.0E-5 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TDE_1214 ddc2e1ab5de2fe7ced1eb8cb5552e7b7 121 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 107 120 6.0E-5 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TDE_2471 20ab4f8afa91687ccec3971d6ff90f84 360 Pfam PF00892 EamA-like transporter family 71 200 3.6E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_2471 20ab4f8afa91687ccec3971d6ff90f84 360 Pfam PF00892 EamA-like transporter family 214 347 1.5E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_2471 20ab4f8afa91687ccec3971d6ff90f84 360 SUPERFAMILY SSF103481 253 347 6.41E-13 T 12-10-2018 TDE_2471 20ab4f8afa91687ccec3971d6ff90f84 360 SUPERFAMILY SSF103481 102 203 2.75E-6 T 12-10-2018 TDE_0961 5bc287032d9335364cc4ba4a3933e238 137 Gene3D G3DSA:1.10.287.110 64 134 3.4E-7 T 12-10-2018 IPR036869 Chaperone J-domain superfamily TDE_0961 5bc287032d9335364cc4ba4a3933e238 137 SUPERFAMILY SSF46565 65 120 1.96E-10 T 12-10-2018 IPR036869 Chaperone J-domain superfamily TDE_0961 5bc287032d9335364cc4ba4a3933e238 137 SMART SM00271 64 125 4.2E-5 T 12-10-2018 IPR001623 DnaJ domain TDE_0030 ff05f0b3373f74a10b66ef87d5b1705f 259 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 6 245 2.7E-37 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TDE_0323 98947398464969a979d8e9992512c656 481 Pfam PF07556 Protein of unknown function (DUF1538) 261 471 1.7E-58 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 TDE_0323 98947398464969a979d8e9992512c656 481 Pfam PF07556 Protein of unknown function (DUF1538) 6 216 2.0E-59 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 TDE_1862 27822aa53ee9ed72e265e950d4b8ba1c 323 Pfam PF13349 Putative adhesin 103 304 6.2E-14 T 12-10-2018 IPR025164 Putative adhesin TDE_2503 3f2822066e0e4352197000fbbf38d9d6 390 SUPERFAMILY SSF88713 170 385 1.22E-55 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TDE_2503 3f2822066e0e4352197000fbbf38d9d6 390 Gene3D G3DSA:3.20.20.370 169 387 2.4E-68 T 12-10-2018 TDE_2503 3f2822066e0e4352197000fbbf38d9d6 390 Pfam PF04748 Divergent polysaccharide deacetylase 176 386 1.7E-67 T 12-10-2018 IPR006837 Divergent polysaccharide deacetylase TDE_0010 e11b383d1e5e4565f888181882013902 188 PRINTS PR00502 NUDIX hydrolase family signature 93 108 8.7E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TDE_0010 e11b383d1e5e4565f888181882013902 188 PRINTS PR00502 NUDIX hydrolase family signature 79 93 8.7E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TDE_0010 e11b383d1e5e4565f888181882013902 188 Pfam PF00293 NUDIX domain 51 164 1.4E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TDE_0010 e11b383d1e5e4565f888181882013902 188 SUPERFAMILY SSF55811 9 182 1.49E-34 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TDE_0010 e11b383d1e5e4565f888181882013902 188 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TDE_0010 e11b383d1e5e4565f888181882013902 188 Gene3D G3DSA:3.90.79.10 5 186 7.0E-39 T 12-10-2018 TDE_1720 bad80fb1fffc29c9961f359641ee88da 229 Pfam PF07505 Protein of unknown function (DUF5131) 11 198 9.3E-27 T 12-10-2018 IPR011101 Protein of unknown function DUF5131 TDE_1720 bad80fb1fffc29c9961f359641ee88da 229 TIGRFAM TIGR04471 rSAM_mob_pairA: radical SAM mobile pair protein A 3 222 7.8E-127 T 12-10-2018 IPR031010 Radical SAM mobile pair protein A TDE_0081 2990a799cde9cf757bf2885fadc29638 462 SUPERFAMILY SSF53335 136 301 9.57E-7 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TDE_0081 2990a799cde9cf757bf2885fadc29638 462 Pfam PF09243 Mitochondrial small ribosomal subunit Rsm22 270 342 1.0E-9 T 12-10-2018 IPR015324 Ribosomal protein Rsm22-like GO:0006412|GO:0008168 TDE_0081 2990a799cde9cf757bf2885fadc29638 462 Gene3D G3DSA:3.40.50.150 131 308 7.3E-6 T 12-10-2018 TDE_2412 7089babd34b393e9e4c92042303e156d 155 Pfam PF00583 Acetyltransferase (GNAT) family 25 144 4.6E-15 T 12-10-2018 IPR000182 GNAT domain TDE_2412 7089babd34b393e9e4c92042303e156d 155 SUPERFAMILY SSF55729 20 145 4.51E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2412 7089babd34b393e9e4c92042303e156d 155 Gene3D G3DSA:3.40.630.30 7 153 6.3E-31 T 12-10-2018 TDE_0403 707dea23e2f2debceda23154185b56d7 284 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 237 7.0E-75 T 12-10-2018 TDE_0403 707dea23e2f2debceda23154185b56d7 284 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 284 1.3E-48 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_2676 b685537524d5141c1aa2e6eb1552161a 437 Pfam PF14821 Threonine synthase N terminus 4 69 2.6E-7 T 12-10-2018 IPR029144 Threonine synthase, N-terminal TDE_2676 b685537524d5141c1aa2e6eb1552161a 437 Gene3D G3DSA:3.40.50.1100 104 408 4.4E-79 T 12-10-2018 TDE_2676 b685537524d5141c1aa2e6eb1552161a 437 Gene3D G3DSA:3.40.50.1100 87 402 4.4E-79 T 12-10-2018 TDE_2676 b685537524d5141c1aa2e6eb1552161a 437 Gene3D G3DSA:3.90.1380.10 1 85 9.3E-10 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily TDE_2676 b685537524d5141c1aa2e6eb1552161a 437 SUPERFAMILY SSF53686 1 434 2.24E-78 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TDE_2183 09fb8316620fb52ba0b2e57481dd7b2e 218 Pfam PF14353 CpXC protein 3 132 2.3E-26 T 12-10-2018 IPR025682 CpXC domain TDE_1727 aa77614dd05fd4994649072f438aaa46 138 Gene3D G3DSA:3.30.300.20 2 137 3.5E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta TDE_1727 aa77614dd05fd4994649072f438aaa46 138 SUPERFAMILY SSF82784 6 135 1.18E-32 T 12-10-2018 IPR036102 OsmC/Ohr superfamily TDE_1727 aa77614dd05fd4994649072f438aaa46 138 Pfam PF02566 OsmC-like protein 38 133 9.8E-21 T 12-10-2018 IPR003718 OsmC/Ohr family TDE_1451 835a1c0d1c78d73315e7925a540c3ac3 372 SUPERFAMILY SSF54001 245 324 6.87E-6 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TDE_2365 b25428f75206885da808b0081398613f 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 306 7.2E-46 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TDE_2239 eb409b73fbdcab92d8abfcf78679d9bb 330 SUPERFAMILY SSF56436 52 328 1.55E-49 T 12-10-2018 IPR016187 C-type lectin fold TDE_2239 eb409b73fbdcab92d8abfcf78679d9bb 330 Pfam PF03781 Sulfatase-modifying factor enzyme 1 52 327 2.7E-38 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_2239 eb409b73fbdcab92d8abfcf78679d9bb 330 Gene3D G3DSA:3.90.1580.10 37 330 1.3E-72 T 12-10-2018 TDE_1661 f63bb510aaa854d4d64b8d20bbab7aae 142 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 32 133 1.6E-23 T 12-10-2018 IPR018673 Protein of unknown function DUF2141 TDE_1093 246050a5a8e5d54fd6fbd0cab8f95e78 234 Pfam PF16258 Domain of unknown function (DUF4912) 80 189 1.3E-21 T 12-10-2018 IPR032585 Protein of unknown function DUF4912 TDE_2640 b54eb8f3ec23936fbf198de029715c96 305 SUPERFAMILY SSF53187 63 304 1.08E-16 T 12-10-2018 TDE_2640 b54eb8f3ec23936fbf198de029715c96 305 Pfam PF04389 Peptidase family M28 68 290 4.8E-13 T 12-10-2018 IPR007484 Peptidase M28 TDE_1318 cfb9932dc4ad39b8f1efbdc400f3c153 384 Pfam PF07238 PilZ domain 217 328 2.7E-9 T 12-10-2018 IPR009875 PilZ domain GO:0035438 TDE_1423 af6c5d3aaaa01544e1a0787b3644d12d 115 SUPERFAMILY SSF51182 2 107 4.0E-6 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily TDE_1423 af6c5d3aaaa01544e1a0787b3644d12d 115 Pfam PF05523 WxcM-like, C-terminal 2 106 2.4E-11 T 12-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 TDE_1423 af6c5d3aaaa01544e1a0787b3644d12d 115 Gene3D G3DSA:2.60.120.10 1 110 4.2E-10 T 12-10-2018 IPR014710 RmlC-like jelly roll fold TDE_0642 285d8816a6d34945989c042df8cd4b7c 234 SUPERFAMILY SSF81296 154 234 3.25E-11 T 12-10-2018 IPR014756 Immunoglobulin E-set TDE_0642 285d8816a6d34945989c042df8cd4b7c 234 Gene3D G3DSA:2.60.40.10 138 232 2.3E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold TDE_0508 b93b44b51ba880385f3fb5a6640b0e07 238 SUPERFAMILY SSF52047 57 210 5.57E-13 T 12-10-2018 TDE_0508 b93b44b51ba880385f3fb5a6640b0e07 238 Gene3D G3DSA:3.80.10.10 13 225 2.5E-16 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0596 9ffa12492a8a6caf0053d6794de72422 342 Pfam PF13310 Virulence protein RhuM family 70 324 3.1E-112 T 12-10-2018 IPR011204 Virulence protein RhuM-like TDE_0596 9ffa12492a8a6caf0053d6794de72422 342 PIRSF PIRSF015268 4 341 3.6E-141 T 12-10-2018 IPR011204 Virulence protein RhuM-like TDE_1309 49e9c80745e6bedba8373c5d6d274669 475 Pfam PF01523 Putative modulator of DNA gyrase 29 325 2.2E-35 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TDE_1309 49e9c80745e6bedba8373c5d6d274669 475 SUPERFAMILY SSF111283 14 469 2.09E-70 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TDE_0232 2d5548dc28987cf00cf66a9f4fbf9eb8 176 Pfam PF01661 Macro domain 24 136 5.5E-44 T 12-10-2018 IPR002589 Macro domain TDE_0232 2d5548dc28987cf00cf66a9f4fbf9eb8 176 Gene3D G3DSA:3.40.220.10 1 176 2.1E-76 T 12-10-2018 TDE_0232 2d5548dc28987cf00cf66a9f4fbf9eb8 176 SUPERFAMILY SSF52949 5 172 2.35E-66 T 12-10-2018 TDE_0232 2d5548dc28987cf00cf66a9f4fbf9eb8 176 SMART SM00506 7 136 1.4E-46 T 12-10-2018 IPR002589 Macro domain TDE_0757 de7078f86fa97caae4b59a22f5421cdc 355 Gene3D G3DSA:1.10.3470.10 11 351 1.4E-90 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_0757 de7078f86fa97caae4b59a22f5421cdc 355 SUPERFAMILY SSF81345 10 345 4.84E-74 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_0757 de7078f86fa97caae4b59a22f5421cdc 355 Pfam PF01032 FecCD transport family 25 345 1.4E-84 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TDE_2739 684da6812a088ed5110841dfa97f01f2 138 SUPERFAMILY SSF103481 44 137 3.27E-14 T 12-10-2018 TDE_2739 684da6812a088ed5110841dfa97f01f2 138 Pfam PF00892 EamA-like transporter family 2 137 5.6E-23 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TDE_1766 d52ee4b1e230644296dce586df4eae58 152 SUPERFAMILY SSF55961 11 146 1.31E-5 T 12-10-2018 TDE_0423 5188d1fbbf4decbb4d2ddef1937f5a5d 421 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 413 1.4E-170 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_0423 5188d1fbbf4decbb4d2ddef1937f5a5d 421 TIGRFAM TIGR01781 Trep_dent_lipo: Treponema denticola clustered lipoprotein 2 413 5.5E-167 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_0277 f28f3a8a5c5c6cd9de08c2afb93ad9a2 131 SUPERFAMILY SSF88723 1 122 3.64E-13 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_0277 f28f3a8a5c5c6cd9de08c2afb93ad9a2 131 Pfam PF01850 PIN domain 3 122 2.4E-5 T 12-10-2018 IPR002716 PIN domain TDE_0253 fec5b06b057ebc5469bad22aefa80041 497 SUPERFAMILY SSF52058 167 354 6.12E-7 T 12-10-2018 TDE_0253 fec5b06b057ebc5469bad22aefa80041 497 Gene3D G3DSA:3.80.10.10 137 370 1.3E-8 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_0721 77e50d9a24dcb8d6073d26656b1089b4 461 SUPERFAMILY SSF56954 183 439 3.79E-5 T 12-10-2018 TDE_0902 961bf1cf8a1ecdd3e6555800645c6fbe 250 Gene3D G3DSA:2.160.20.120 31 250 6.3E-58 T 12-10-2018 TDE_0902 961bf1cf8a1ecdd3e6555800645c6fbe 250 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 50 235 1.1E-43 T 12-10-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain TDE_2362 0c5922530c871048536e4a0f65a9f705 169 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 28 159 5.4E-16 T 12-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase TDE_2731 c7f3e70c610b7d4a2ecb92386e86f697 333 SUPERFAMILY SSF51395 17 329 4.03E-73 T 12-10-2018 TDE_2731 c7f3e70c610b7d4a2ecb92386e86f697 333 Pfam PF01207 Dihydrouridine synthase (Dus) 19 326 1.0E-73 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TDE_2731 c7f3e70c610b7d4a2ecb92386e86f697 333 Gene3D G3DSA:3.20.20.70 12 261 6.0E-77 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_2731 c7f3e70c610b7d4a2ecb92386e86f697 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 8 329 7.2E-111 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 TDE_2731 c7f3e70c610b7d4a2ecb92386e86f697 333 PIRSF PIRSF006621 8 331 1.7E-82 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TDE_2731 c7f3e70c610b7d4a2ecb92386e86f697 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 100 118 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TDE_2731 c7f3e70c610b7d4a2ecb92386e86f697 333 Gene3D G3DSA:1.10.1200.80 262 331 5.6E-10 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 TDE_0597 d8c46ab1278f5abf6367c6aa42ecdb2f 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 397 54.745 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TDE_0597 d8c46ab1278f5abf6367c6aa42ecdb2f 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 87 320 9.1E-105 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TDE_0597 d8c46ab1278f5abf6367c6aa42ecdb2f 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 85 1.4E-34 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TDE_0597 d8c46ab1278f5abf6367c6aa42ecdb2f 397 Pfam PF07055 Enoyl reductase FAD binding domain 328 391 7.6E-27 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TDE_0597 d8c46ab1278f5abf6367c6aa42ecdb2f 397 Gene3D G3DSA:3.40.50.720 1 397 3.0E-174 T 12-10-2018 TDE_1607 4c744b1ede5035afa254f63b0fb4bef1 174 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TDE_1607 4c744b1ede5035afa254f63b0fb4bef1 174 Pfam PF00293 NUDIX domain 29 113 1.9E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TDE_1607 4c744b1ede5035afa254f63b0fb4bef1 174 SUPERFAMILY SSF55811 16 149 2.71E-19 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TDE_1607 4c744b1ede5035afa254f63b0fb4bef1 174 Gene3D G3DSA:3.90.79.10 6 155 6.9E-19 T 12-10-2018 TDE_1136 64f326687f7adedfdb490be9ce053534 168 SUPERFAMILY SSF51261 8 90 3.66E-19 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_1136 64f326687f7adedfdb490be9ce053534 168 Pfam PF01551 Peptidase family M23 8 87 2.9E-17 T 12-10-2018 IPR016047 Peptidase M23 TDE_1136 64f326687f7adedfdb490be9ce053534 168 Gene3D G3DSA:2.70.70.10 4 118 2.4E-21 T 12-10-2018 IPR011055 Duplicated hybrid motif TDE_0280 5e20e789a383fa94be340cc54b1ae25d 133 Gene3D G3DSA:3.40.50.1010 1 132 9.6E-31 T 12-10-2018 TDE_0280 5e20e789a383fa94be340cc54b1ae25d 133 Pfam PF01850 PIN domain 2 124 1.8E-13 T 12-10-2018 IPR002716 PIN domain TDE_0280 5e20e789a383fa94be340cc54b1ae25d 133 SUPERFAMILY SSF88723 1 125 5.61E-21 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_0214 afd8a9a10b0cd41e9308b341dd957f32 314 Pfam PF07238 PilZ domain 146 242 6.0E-6 T 12-10-2018 IPR009875 PilZ domain GO:0035438 TDE_1597 6c75f53ea5d9f7929ff0f4edc72d866e 235 Pfam PF02361 Cobalt transport protein 36 193 1.6E-9 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_0210 4b050459f8c6e866f450a42efa87e4e7 171 SUPERFAMILY SSF52540 2 170 7.61E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0210 4b050459f8c6e866f450a42efa87e4e7 171 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 2 170 3.0E-52 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TDE_0210 4b050459f8c6e866f450a42efa87e4e7 171 PIRSF PIRSF015617 1 171 1.4E-61 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TDE_0210 4b050459f8c6e866f450a42efa87e4e7 171 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 3 170 1.1E-62 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TDE_0210 4b050459f8c6e866f450a42efa87e4e7 171 Gene3D G3DSA:3.40.50.300 1 170 4.9E-62 T 12-10-2018 TDE_0520 d59d36b1b630074cd677279def4e02d9 195 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 40 188 6.5E-23 T 12-10-2018 IPR018958 Knr4/Smi1-like domain TDE_0520 d59d36b1b630074cd677279def4e02d9 195 SMART SM00860 40 189 2.2E-12 T 12-10-2018 IPR018958 Knr4/Smi1-like domain TDE_0520 d59d36b1b630074cd677279def4e02d9 195 SUPERFAMILY SSF160631 29 193 4.84E-21 T 12-10-2018 TDE_0520 d59d36b1b630074cd677279def4e02d9 195 Gene3D G3DSA:3.40.1580.10 22 195 3.6E-17 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily TDE_0662 f44722062799e953ffb68fd9129663c5 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 3.9E-30 T 12-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TDE_0662 f44722062799e953ffb68fd9129663c5 87 Gene3D G3DSA:3.30.2310.20 1 84 8.8E-37 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0662 f44722062799e953ffb68fd9129663c5 87 SUPERFAMILY SSF143011 1 83 1.57E-25 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TDE_0662 f44722062799e953ffb68fd9129663c5 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 2.1E-35 T 12-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TDE_0954 0ffc04dc4e57e5aaa088b7c8e417a17c 278 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 244 1.8E-20 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TDE_1612 e2d2aa838a575346a313d9820ea8d983 353 Gene3D G3DSA:3.40.50.2020 64 317 2.0E-35 T 12-10-2018 TDE_1612 e2d2aa838a575346a313d9820ea8d983 353 Pfam PF14681 Uracil phosphoribosyltransferase 88 315 8.5E-23 T 12-10-2018 TDE_1612 e2d2aa838a575346a313d9820ea8d983 353 SUPERFAMILY SSF53271 66 316 1.27E-32 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like TDE_1224 43de35cfa04d3c72b4aa8310e3012697 304 Pfam PF00950 ABC 3 transport family 11 275 5.3E-76 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TDE_1224 43de35cfa04d3c72b4aa8310e3012697 304 SUPERFAMILY SSF81345 11 265 5.36E-28 T 12-10-2018 IPR037294 ABC transporter, BtuC-like TDE_2767 08b599d6267cf80f22b84535ceb8429c 65 Pfam PF06289 Flagellar protein (FlbD) 1 58 1.6E-24 T 12-10-2018 IPR009384 Swarming motility protein SwrD-like TDE_2379 be7a5a5d3522cdcd248187d50bd38bd8 379 Pfam PF12698 ABC-2 family transporter protein 19 369 4.1E-26 T 12-10-2018 TDE_0468 0d7d6b3d8ec410d7c219f00d12fecad0 257 Gene3D G3DSA:2.50.20.10 19 253 9.6E-54 T 12-10-2018 TDE_0468 0d7d6b3d8ec410d7c219f00d12fecad0 257 Pfam PF17131 Outer membrane lipoprotein-sorting protein 71 254 4.5E-49 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TDE_0564 4fbd5d28a51fc360451cee27169338d9 216 Pfam PF14137 Domain of unknown function (DUF4304) 19 124 2.5E-11 T 12-10-2018 IPR025412 Protein of unknown function DUF4304 TDE_2607 e371dba7490fe09ab68327e21fac1ce4 222 Gene3D G3DSA:2.50.20.10 29 215 4.1E-27 T 12-10-2018 TDE_2607 e371dba7490fe09ab68327e21fac1ce4 222 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 58 207 4.3E-13 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like TDE_2607 e371dba7490fe09ab68327e21fac1ce4 222 SUPERFAMILY SSF89392 27 214 3.81E-28 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TDE_2368 6ee7cea794e4727bf7ea40991e51fbe1 153 SUPERFAMILY SSF55826 5 146 3.79E-35 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TDE_2368 6ee7cea794e4727bf7ea40991e51fbe1 153 Pfam PF04073 Aminoacyl-tRNA editing domain 26 141 1.4E-25 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TDE_2368 6ee7cea794e4727bf7ea40991e51fbe1 153 Gene3D G3DSA:3.90.960.10 3 153 1.8E-40 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TDE_0198 6a6bf9943f2369e6e6bd94ea8d7e4611 329 Pfam PF06089 L-asparaginase II 7 326 4.3E-102 T 12-10-2018 IPR010349 L-asparaginase II TDE_1520 5576705baed87347800aafaaff5eb37d 281 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 9 279 1.2E-97 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 TDE_1520 5576705baed87347800aafaaff5eb37d 281 Pfam PF05681 Fumarate hydratase (Fumerase) 10 279 1.8E-115 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 TDE_0427 9307cd729ab6bce7547480e95e8c89a0 457 Pfam PF02321 Outer membrane efflux protein 23 246 2.7E-6 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TDE_0427 9307cd729ab6bce7547480e95e8c89a0 457 SUPERFAMILY SSF56954 5 455 1.31E-14 T 12-10-2018 TDE_2540 e1eb0b2ffc5b8d18de246441f5defe53 928 Pfam PF11369 Protein of unknown function (DUF3160) 229 922 1.9E-191 T 12-10-2018 IPR022601 Protein of unknown function DUF3160 TDE_2540 e1eb0b2ffc5b8d18de246441f5defe53 928 SMART SM01325 226 923 0.0 T 12-10-2018 IPR022601 Protein of unknown function DUF3160 TDE_0868 1fa28fefadbe99b5d463697e8ca3fa47 335 SUPERFAMILY SSF51395 1 333 1.8E-99 T 12-10-2018 TDE_0868 1fa28fefadbe99b5d463697e8ca3fa47 335 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 334 8.7E-74 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TDE_0868 1fa28fefadbe99b5d463697e8ca3fa47 335 Gene3D G3DSA:3.20.20.70 1 335 3.2E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TDE_0056 84e0ee1b99aaa29876f023f78f606ed3 68 SUPERFAMILY SSF63562 5 66 1.74E-7 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TDE_1382 f8550f3b161309aa416679d07abdb5c3 117 Pfam PF01022 Bacterial regulatory protein, arsR family 40 86 3.9E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TDE_1382 f8550f3b161309aa416679d07abdb5c3 117 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 56 74 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 TDE_1382 f8550f3b161309aa416679d07abdb5c3 117 Gene3D G3DSA:1.10.10.10 4 117 4.3E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TDE_1382 f8550f3b161309aa416679d07abdb5c3 117 SUPERFAMILY SSF46785 17 113 9.99E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TDE_1382 f8550f3b161309aa416679d07abdb5c3 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 65 2.1E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TDE_1382 f8550f3b161309aa416679d07abdb5c3 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 50 2.1E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TDE_1382 f8550f3b161309aa416679d07abdb5c3 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 82 97 2.1E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TDE_1382 f8550f3b161309aa416679d07abdb5c3 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 2.1E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TDE_1382 f8550f3b161309aa416679d07abdb5c3 117 SMART SM00418 33 111 3.4E-28 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TDE_0390 f4993a5597af5cec45dd7bb18cc51de3 85 Pfam PF11823 Protein of unknown function (DUF3343) 4 71 5.2E-15 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 TDE_0311 138be6670e10afa3f0ab2dc3acbe4d28 266 Pfam PF02511 Thymidylate synthase complementing protein 14 213 7.6E-57 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TDE_0311 138be6670e10afa3f0ab2dc3acbe4d28 266 SUPERFAMILY SSF69796 3 227 2.75E-69 T 12-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TDE_0311 138be6670e10afa3f0ab2dc3acbe4d28 266 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 12 218 1.6E-64 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TDE_0311 138be6670e10afa3f0ab2dc3acbe4d28 266 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 8 227 29.55 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TDE_0311 138be6670e10afa3f0ab2dc3acbe4d28 266 Gene3D G3DSA:3.30.1360.170 1 233 9.3E-74 T 12-10-2018 TDE_0831 0075c5c7277301ac8a0e55442e017d2f 66 Pfam PF12784 PD-(D/E)XK nuclease family transposase 2 55 2.0E-8 T 12-10-2018 TDE_0892 cd02054de9bd67ef7cfc74fec8c87e24 262 Pfam PF06182 ABC-2 family transporter protein 34 261 1.7E-62 T 12-10-2018 IPR010390 Protein of unknown function DUF990 TDE_1077 f563dd8d77b949dd7f5ee650fd10c0ec 401 Pfam PF07690 Major Facilitator Superfamily 20 297 1.0E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TDE_1077 f563dd8d77b949dd7f5ee650fd10c0ec 401 SUPERFAMILY SSF103473 16 395 7.98E-39 T 12-10-2018 IPR036259 MFS transporter superfamily TDE_1077 f563dd8d77b949dd7f5ee650fd10c0ec 401 Gene3D G3DSA:1.20.1250.20 10 393 3.6E-34 T 12-10-2018 TDE_0583 f0ccdb0aa06a542e1954b018bff7ff8b 257 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 32 253 1.4E-54 T 12-10-2018 IPR015402 Protein of unknown function DUF1980 TDE_0583 f0ccdb0aa06a542e1954b018bff7ff8b 257 Pfam PF09323 Domain of unknown function (DUF1980) 14 118 1.3E-7 T 12-10-2018 IPR015402 Protein of unknown function DUF1980 TDE_0189 78242df2c9128bd8250242edda78b12b 262 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 7.9E-41 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TDE_0645 aaa61130456535294b5610b6b96dcdd7 238 Gene3D G3DSA:2.60.450.10 153 217 3.3E-5 T 12-10-2018 TDE_0645 aaa61130456535294b5610b6b96dcdd7 238 Gene3D G3DSA:2.60.450.10 31 152 1.3E-9 T 12-10-2018 TDE_0645 aaa61130456535294b5610b6b96dcdd7 238 Pfam PF03968 OstA-like protein 46 145 8.9E-9 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal TDE_0703 4b298f50834b3f3b8639ff92162df5dc 74 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 12 54 2.8E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_0703 4b298f50834b3f3b8639ff92162df5dc 74 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 11 53 5.8E-13 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_0703 4b298f50834b3f3b8639ff92162df5dc 74 SUPERFAMILY SSF89447 9 53 3.4E-11 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily TDE_0703 4b298f50834b3f3b8639ff92162df5dc 74 SMART SM00966 12 58 1.1E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TDE_0703 4b298f50834b3f3b8639ff92162df5dc 74 Gene3D G3DSA:2.10.260.10 9 50 1.8E-10 T 12-10-2018 TDE_1245 82f9c1d1d4a935140b492c43aadd2507 329 Gene3D G3DSA:1.25.40.10 253 329 1.0E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1245 82f9c1d1d4a935140b492c43aadd2507 329 SUPERFAMILY SSF48452 255 325 5.38E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2525 9be9bc560d6c1ec9c447751be29cbbc4 582 Pfam PF01973 Protein of unknown function DUF115 204 366 1.0E-26 T 12-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TDE_1219 4e86878f1d6fdefc09c70ba26c60f872 154 Pfam PF02050 Flagellar FliJ protein 20 142 1.5E-12 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TDE_1219 4e86878f1d6fdefc09c70ba26c60f872 154 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 9.2E-36 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TDE_0063 0ba75686df304625ef362f89808ade5f 511 Pfam PF17239 Family of unknown function (DUF5312) 293 500 4.5E-9 T 12-10-2018 IPR035196 Protein of unknown function DUF5312 TDE_1050 8a38e10a79b46d7db4341c3d701e1a59 227 Gene3D G3DSA:3.40.50.300 9 209 8.9E-16 T 12-10-2018 TDE_1050 8a38e10a79b46d7db4341c3d701e1a59 227 SUPERFAMILY SSF52540 12 191 5.42E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_1141 a705d25f3e0f23d1528f260b03b75024 527 SUPERFAMILY SSF88874 363 526 1.96E-11 T 12-10-2018 TDE_2274 b8893c8dcd22fff05c84421b1ec52d32 291 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 18 281 2.2E-64 T 12-10-2018 IPR018708 Protein of unknown function DUF2225 TDE_2560 71792150efd9fbda517b68c45638d3f7 282 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 13 281 1.9E-46 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_2560 71792150efd9fbda517b68c45638d3f7 282 Pfam PF12784 PD-(D/E)XK nuclease family transposase 12 240 5.1E-74 T 12-10-2018 TDE_1199 057cc7a315158520695b848688f3aeb3 94 Pfam PF04999 Cell division protein FtsL 5 81 5.1E-6 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 TDE_0571 d272fcb03ec87624e179941f51f673bb 760 SUPERFAMILY SSF56436 512 758 4.47E-45 T 12-10-2018 IPR016187 C-type lectin fold TDE_0571 d272fcb03ec87624e179941f51f673bb 760 Gene3D G3DSA:3.90.1580.10 493 760 1.8E-71 T 12-10-2018 TDE_0571 d272fcb03ec87624e179941f51f673bb 760 Pfam PF03781 Sulfatase-modifying factor enzyme 1 513 757 4.7E-32 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TDE_0736 33cd9e3dcf13b386f7f742250113994e 76 Pfam PF12651 Ribbon-helix-helix domain 3 39 1.7E-5 T 12-10-2018 IPR038733 Predicted DNA-binding protein, ribbon-helix-helix domain TDE_0652 45d79f340feec7360d719ae16250d051 244 Pfam PF16481 Domain of unknown function (DUF5058) 9 232 1.0E-72 T 12-10-2018 IPR032479 Protein of unknown function DUF5058 TDE_1102 734538f863c82fc2ed0a7acd18d5f801 303 SUPERFAMILY SSF48452 101 276 7.59E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1102 734538f863c82fc2ed0a7acd18d5f801 303 SMART SM00028 95 126 330.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1102 734538f863c82fc2ed0a7acd18d5f801 303 SMART SM00028 253 285 0.73 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1102 734538f863c82fc2ed0a7acd18d5f801 303 SMART SM00028 219 252 25.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TDE_1102 734538f863c82fc2ed0a7acd18d5f801 303 Pfam PF14559 Tetratricopeptide repeat 230 278 9.2E-6 T 12-10-2018 TDE_1102 734538f863c82fc2ed0a7acd18d5f801 303 Gene3D G3DSA:1.25.40.10 20 171 5.2E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1102 734538f863c82fc2ed0a7acd18d5f801 303 Gene3D G3DSA:1.25.40.10 175 299 4.1E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0086 b662323c6c67694c0cc3589e62a4f4ab 945 Pfam PF12705 PD-(D/E)XK nuclease superfamily 645 939 1.3E-22 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TDE_0086 b662323c6c67694c0cc3589e62a4f4ab 945 SUPERFAMILY SSF52540 220 453 1.12E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_2187 364dad50d5154dbe38edadb0b8a5bb35 133 SUPERFAMILY SSF110849 3 105 1.74E-16 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TDE_2187 364dad50d5154dbe38edadb0b8a5bb35 133 SMART SM00470 1 85 6.6E-22 T 12-10-2018 IPR003115 ParB/Sulfiredoxin TDE_2187 364dad50d5154dbe38edadb0b8a5bb35 133 Gene3D G3DSA:3.90.1530.30 10 69 1.2E-11 T 12-10-2018 TDE_2187 364dad50d5154dbe38edadb0b8a5bb35 133 Pfam PF02195 ParB-like nuclease domain 2 84 3.4E-16 T 12-10-2018 IPR003115 ParB/Sulfiredoxin TDE_0152 27f2c884bc3b5ea3edb3445e0fbfc282 451 PIRSF PIRSF006060 3 451 9.6E-33 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TDE_0152 27f2c884bc3b5ea3edb3445e0fbfc282 451 Gene3D G3DSA:1.20.1740.10 8 451 4.1E-35 T 12-10-2018 TDE_0152 27f2c884bc3b5ea3edb3445e0fbfc282 451 Pfam PF13520 Amino acid permease 15 431 1.0E-27 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TDE_2705 c8d131a86f8b2f882f5e3b020948b95a 212 SMART SM01126 59 195 6.2E-4 T 12-10-2018 IPR024445 ISXO2-like transposase domain TDE_2705 c8d131a86f8b2f882f5e3b020948b95a 212 Pfam PF12762 ISXO2-like transposase domain 72 195 1.4E-6 T 12-10-2018 IPR024445 ISXO2-like transposase domain TDE_0279 7a071a6a862086a1e5ed9bd3889edce8 324 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 117 131 1.9E-7 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TDE_0279 7a071a6a862086a1e5ed9bd3889edce8 324 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 41 49 1.9E-7 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TDE_0279 7a071a6a862086a1e5ed9bd3889edce8 324 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 71 82 1.9E-7 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TDE_0279 7a071a6a862086a1e5ed9bd3889edce8 324 Gene3D G3DSA:3.40.50.1820 19 318 2.1E-24 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0279 7a071a6a862086a1e5ed9bd3889edce8 324 SUPERFAMILY SSF53474 22 316 2.01E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_1263 d7a45f2af62cf05849685cc6b6e30193 250 Pfam PF00882 Zinc dependent phospholipase C 10 123 4.9E-8 T 12-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 TDE_2328 47d978768d417c7600cf9e53f60c2f40 516 Pfam PF03806 AbgT putative transporter family 12 515 7.3E-184 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 TDE_1812 8cf273ca185bd8d3f770c77281249504 91 SUPERFAMILY SSF47413 20 88 1.69E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_1812 8cf273ca185bd8d3f770c77281249504 91 Gene3D G3DSA:1.10.260.40 12 90 8.2E-6 T 12-10-2018 TDE_1552 1b85df66784467b7667cdceb0e0ffb7f 193 SUPERFAMILY SSF48452 119 185 1.44E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1552 1b85df66784467b7667cdceb0e0ffb7f 193 Gene3D G3DSA:1.25.40.10 62 191 1.5E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_0794 02f6fdada3917d0f86f3136d1d519891 120 TIGRFAM TIGR02328 TIGR02328: conserved hypothetical protein 1 120 4.2E-65 T 12-10-2018 IPR012650 Conserved hypothetical protein CHP02328 TDE_0794 02f6fdada3917d0f86f3136d1d519891 120 Pfam PF03013 Pyrimidine dimer DNA glycosylase 1 109 4.3E-40 T 12-10-2018 IPR004260 Pyrimidine dimer DNA glycosylase TDE_0580 d82a1c7c082a5b68ecc42b604d6119ab 432 Pfam PF01882 Protein of unknown function DUF58 198 281 7.4E-9 T 12-10-2018 IPR002881 Domain of unknown function DUF58 TDE_2670 a50e3148dcfa0c5b06ac8aab93dd874e 355 Pfam PF00953 Glycosyl transferase family 4 82 239 1.6E-34 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 TDE_0270 8207aac68e975f0b6608dd55aa0fd0d7 341 Gene3D G3DSA:2.40.70.10 76 210 2.6E-6 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily TDE_0658 7156272d3850c80f511faa8028427d66 681 Pfam PF02687 FtsX-like permease family 85 175 3.5E-6 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TDE_0658 7156272d3850c80f511faa8028427d66 681 PIRSF PIRSF018968 424 681 1.7E-18 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 TDE_0658 7156272d3850c80f511faa8028427d66 681 PIRSF PIRSF018968 4 387 3.2E-40 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 TDE_1043 4a2532b3c78c6c44e171396b69d86553 377 Pfam PF03739 Predicted permease YjgP/YjgQ family 14 371 2.7E-66 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TDE_2538 e145dbd33e566ce95968847d94dea06b 135 Pfam PF13026 Protein of unknown function (DUF3887) 37 132 9.5E-18 T 12-10-2018 IPR024981 Domain of unknown function DUF3887 KEGG: 00983+3.1.1.1|MetaCyc: PWY-6303|MetaCyc: PWY-6857 TDE_2538 e145dbd33e566ce95968847d94dea06b 135 Gene3D G3DSA:3.10.450.590 21 133 2.2E-16 T 12-10-2018 TDE_1813 c4f65680842b4a54d1e01c4c18d62768 128 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 35 120 1.3E-12 T 12-10-2018 IPR009241 Toxin HigB-like TDE_0815 7e6abcb4954c2a682b3075a8a3567a3a 462 Pfam PF03606 C4-dicarboxylate anaerobic carrier 11 453 2.0E-48 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 TDE_1556 12a97d4f768aca058efed2b295318f25 400 Pfam PF00263 Bacterial type II and III secretion system protein 215 372 6.0E-27 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 TDE_0521 e06056ecd00a8508ebb18d821bf7e35f 498 Gene3D G3DSA:3.40.50.1820 3 481 2.9E-74 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0521 e06056ecd00a8508ebb18d821bf7e35f 498 SUPERFAMILY SSF53474 12 446 7.82E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0521 e06056ecd00a8508ebb18d821bf7e35f 498 Pfam PF00135 Carboxylesterase family 13 449 1.6E-57 T 12-10-2018 IPR002018 Carboxylesterase, type B TDE_1512 435e56f5ff72da44af4b65a62e70171f 422 Pfam PF10080 Predicted membrane protein (DUF2318) 321 421 8.2E-32 T 12-10-2018 IPR018758 Domain of unknown function DUF2318, membrane TDE_1580 b4cc3a92a7db5aa363af8323e4336c48 745 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 107 685 3.2E-190 T 12-10-2018 IPR019934 Conserved hypothetical protein CHP03545 TDE_1351 de75f8d50080d6ad0bceafba70e42db9 172 PIRSF PIRSF037497 3 172 3.5E-54 T 12-10-2018 IPR017225 Cell shape-determining protein MreD, predicted TDE_1351 de75f8d50080d6ad0bceafba70e42db9 172 Pfam PF04093 rod shape-determining protein MreD 6 156 1.6E-21 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TDE_1351 de75f8d50080d6ad0bceafba70e42db9 172 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 5 154 3.7E-23 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TDE_2136 034d41c81cfcdaf1832a6b137f94e020 89 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 63 1.9E-15 T 12-10-2018 TDE_1807 3452744de8e4d25ad33f1768203cb3ca 110 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 19 95 3.7E-24 T 12-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system TDE_1807 3452744de8e4d25ad33f1768203cb3ca 110 Gene3D G3DSA:3.10.450.530 3 99 5.2E-24 T 12-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily TDE_1560 be63fed53fc0ede5623b3226cba1d988 1126 Gene3D G3DSA:2.180.10.10 613 939 1.1E-50 T 12-10-2018 TDE_1560 be63fed53fc0ede5623b3226cba1d988 1126 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 834 939 1.2E-17 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 TDE_1932 63554bd58ccc7b1c9085a9e889a37be2 92 Pfam PF14734 Domain of unknown function (DUF4469) with IG-like fold 21 80 9.2E-10 T 12-10-2018 IPR027824 Domain of unknown function DUF4469 with IG-like fold TDE_2098 bdf6f0bfda9d2c53d91f5279f6f1f2b6 44 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 38 9.1E-10 T 12-10-2018 TDE_2652 c3589ca18e29dc1564baa259b3ad19ab 251 Pfam PF06182 ABC-2 family transporter protein 49 249 2.1E-11 T 12-10-2018 IPR010390 Protein of unknown function DUF990 TDE_2674 d0912cf6dbd91e0b03f6d2e48b8b9811 270 Pfam PF10895 Domain of unknown function (DUF2715) 117 270 4.7E-5 T 12-10-2018 IPR024471 Protein of unknown function DUF2715 TDE_0367 379c1958970b417daa5751f146d29d9f 339 Pfam PF13310 Virulence protein RhuM family 64 307 8.0E-105 T 12-10-2018 IPR011204 Virulence protein RhuM-like TDE_0367 379c1958970b417daa5751f146d29d9f 339 PIRSF PIRSF015268 1 335 9.1E-138 T 12-10-2018 IPR011204 Virulence protein RhuM-like TDE_2666 9e39addf6459d1b541a973df1b42ba22 243 Gene3D G3DSA:3.60.110.10 1 243 3.0E-26 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_2666 9e39addf6459d1b541a973df1b42ba22 243 SUPERFAMILY SSF56317 1 243 4.32E-27 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TDE_2666 9e39addf6459d1b541a973df1b42ba22 243 Pfam PF00795 Carbon-nitrogen hydrolase 7 209 1.4E-8 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TDE_0077 9d308be7d821f89a59d4ae9cd38d5d89 436 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 1 433 2.4E-144 T 12-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 TDE_0077 9d308be7d821f89a59d4ae9cd38d5d89 436 PIRSF PIRSF011588 1 436 2.1E-178 T 12-10-2018 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 TDE_2207 2aec0650638f78fb8b6f2c27c04a2c74 422 Pfam PF04412 Protein of unknown function (DUF521) 1 416 1.3E-100 T 12-10-2018 IPR007506 Aconitase X catalytic domain, putative TDE_0050 ad63316936ee26c5813f0f3483bad6a8 262 Pfam PF00588 SpoU rRNA Methylase family 120 252 1.3E-28 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TDE_0050 ad63316936ee26c5813f0f3483bad6a8 262 Gene3D G3DSA:3.40.1280.10 103 261 1.9E-33 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TDE_0050 ad63316936ee26c5813f0f3483bad6a8 262 SUPERFAMILY SSF75217 119 256 8.72E-30 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases TDE_2775 c419e5a377bec87c972dfa1e5f964ccf 284 Pfam PF14133 Domain of unknown function (DUF4300) 39 277 1.0E-79 T 12-10-2018 IPR025389 Protein of unknown function DUF4300 TDE_0534 9a69c2b3a50c010eda3bd4226742c68e 263 SUPERFAMILY SSF48371 88 199 8.28E-5 T 12-10-2018 IPR016024 Armadillo-type fold TDE_0899 a77972ae339bea4df50388993db0dba0 238 Pfam PF02361 Cobalt transport protein 33 193 6.0E-8 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_2111 886a20e83d828f2d71b6fe742de28a52 304 Pfam PF14238 Domain of unknown function (DUF4340) 87 207 2.0E-6 T 12-10-2018 IPR025641 Domain of unknown function DUF4340 TDE_2487 9238ce52595c1474bc87399af3d0b87d 168 SUPERFAMILY SSF55729 1 152 4.08E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase TDE_2487 9238ce52595c1474bc87399af3d0b87d 168 Gene3D G3DSA:3.40.630.30 1 166 3.6E-33 T 12-10-2018 TDE_2487 9238ce52595c1474bc87399af3d0b87d 168 Pfam PF13673 Acetyltransferase (GNAT) domain 45 164 8.9E-13 T 12-10-2018 IPR000182 GNAT domain TDE_2262 dfb2557b1fb21808be2576ae7b0811c4 414 ProSitePatterns PS01276 Peptidase family U32 signature. 164 182 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 TDE_2262 dfb2557b1fb21808be2576ae7b0811c4 414 Pfam PF01136 Peptidase family U32 78 318 3.8E-88 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 TDE_0494 1e5a0c18f224b5754e70500689152c5d 318 Pfam PF07804 HipA-like C-terminal domain 56 280 2.4E-42 T 12-10-2018 IPR012893 HipA-like, C-terminal TDE_0975 b751ad67409b16087cccbbe449b899bc 292 Pfam PF04754 Putative transposase, YhgA-like 67 141 3.4E-6 T 12-10-2018 IPR006842 Transposase (putative), YhgA-like TDE_2169 357149af3c3d8a25c6c3626d1b0e845c 130 Pfam PF12650 Domain of unknown function (DUF3784) 6 103 7.7E-21 T 12-10-2018 IPR017259 Uncharacterised conserved protein UCP037672 TDE_0695 e771966734cd8d76633206fe8f7712da 351 Pfam PF12698 ABC-2 family transporter protein 22 339 3.0E-13 T 12-10-2018 TDE_1379 e85f423d2170d0fbd7e3fd7ca272852d 214 Pfam PF06912 Protein of unknown function (DUF1275) 15 205 1.3E-25 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 TDE_0361 6003198c80c79bcbced50cbc70a3848c 457 Pfam PF03616 Sodium/glutamate symporter 259 424 5.0E-50 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 TDE_0361 6003198c80c79bcbced50cbc70a3848c 457 Pfam PF03616 Sodium/glutamate symporter 3 214 4.3E-53 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 TDE_0361 6003198c80c79bcbced50cbc70a3848c 457 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 456 21.679 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 TDE_0272 de11e3aa2bacdea3604dfdebc7249dcf 204 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 56 194 2.8E-21 T 12-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase TDE_1280 443a5cc13dfd41c52bbaed71e95d4bc9 233 Gene3D G3DSA:1.25.10.90 3 225 5.3E-17 T 12-10-2018 TDE_1280 443a5cc13dfd41c52bbaed71e95d4bc9 233 Pfam PF08713 DNA alkylation repair enzyme 18 198 6.0E-16 T 12-10-2018 IPR014825 DNA alkylation repair enzyme TDE_1280 443a5cc13dfd41c52bbaed71e95d4bc9 233 SUPERFAMILY SSF48371 12 213 6.33E-34 T 12-10-2018 IPR016024 Armadillo-type fold TDE_2159 0f8dea4ac29ca1a1f6aaeff83d2893d2 201 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 7 197 8.7E-64 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_2159 0f8dea4ac29ca1a1f6aaeff83d2893d2 201 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 9 196 5.7E-47 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_1372 b635a0c9b0ef188b6d94a8038fd23161 554 SUPERFAMILY SSF48452 286 376 1.04E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1372 b635a0c9b0ef188b6d94a8038fd23161 554 Gene3D G3DSA:1.25.40.10 322 442 3.3E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_1344 24fd07bb924c80c064422de5e3dbeb49 292 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 292 1.0E-45 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_1344 24fd07bb924c80c064422de5e3dbeb49 292 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 239 1.5E-75 T 12-10-2018 TDE_0515 2581b2629eb5dca1027d79c49cd421f4 337 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 79 90 - T 12-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 TDE_1317 1c7c37e5c5f00ed600dbf2908592725f 164 Pfam PF02517 CAAX protease self-immunity 43 155 6.9E-14 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TDE_1202 f6a396faff7fe14cae16e091f09d7d04 285 Pfam PF08478 POTRA domain, FtsQ-type 62 130 2.7E-17 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type TDE_1202 f6a396faff7fe14cae16e091f09d7d04 285 Gene3D G3DSA:3.10.20.310 63 129 8.7E-6 T 12-10-2018 TDE_0418 9f59857004b2c1040fef743e9826aad2 403 Pfam PF09710 Treponema clustered lipoprotein (Trep_dent_lipo) 4 111 1.7E-12 T 12-10-2018 IPR010103 Clustered lipoprotein, Treponema denticola TDE_2624 6502a948ea8aee7088fe28bb6b3a758e 194 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 7 190 7.5E-59 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_2624 6502a948ea8aee7088fe28bb6b3a758e 194 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 10 190 1.2E-64 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_2121 abf4f979791fd3eb346a4f4b91c72c4a 205 Pfam PF02677 Uncharacterized BCR, COG1636 26 204 1.1E-64 T 12-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 TDE_2121 abf4f979791fd3eb346a4f4b91c72c4a 205 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 26 205 30.681 T 12-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 TDE_1996 8243b8898f6b511d8901e07c67496c3f 186 Pfam PF13274 Protein of unknown function (DUF4065) 26 136 5.1E-26 T 12-10-2018 IPR025272 Domain of unknown function DUF4065 TDE_0877 a6ac8b2ce337e1accf74cbd917c8ed47 316 SUPERFAMILY SSF53474 26 287 2.61E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_0877 a6ac8b2ce337e1accf74cbd917c8ed47 316 Pfam PF12146 Serine aminopeptidase, S33 67 281 3.0E-19 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 TDE_0877 a6ac8b2ce337e1accf74cbd917c8ed47 316 Gene3D G3DSA:3.40.50.1820 30 303 1.9E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold TDE_2039 2fe6ef140802065ad4ee4d54fc75fc42 448 Pfam PF12704 MacB-like periplasmic core domain 30 250 8.3E-14 T 12-10-2018 IPR025857 MacB-like periplasmic core domain TDE_2039 2fe6ef140802065ad4ee4d54fc75fc42 448 Pfam PF02687 FtsX-like permease family 313 440 3.5E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TDE_0522 397581bf92f683fc1479d2836caa62b1 221 Pfam PF14094 Domain of unknown function (DUF4272) 8 217 4.5E-68 T 12-10-2018 IPR025368 Protein of unknown function DUF4272 TDE_1401 9ff644bbbb46eff5b4037e874933ac53 207 Pfam PF09335 SNARE associated Golgi protein 37 160 5.2E-12 T 12-10-2018 IPR032816 SNARE associated Golgi protein TDE_0587 06f6b3ada0b0fb2527ee026b291c2af7 222 Gene3D G3DSA:3.60.10.10 8 219 3.1E-21 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TDE_0587 06f6b3ada0b0fb2527ee026b291c2af7 222 SUPERFAMILY SSF56219 24 221 3.14E-19 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TDE_1635 f128b87600526e2a5af4fb34133f6401 95 Gene3D G3DSA:3.10.450.530 1 86 4.1E-19 T 12-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily TDE_1635 f128b87600526e2a5af4fb34133f6401 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 84 1.6E-24 T 12-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system TDE_0406 f8bf2e050323b725063cd36cb784730e 539 SUPERFAMILY SSF52540 34 222 4.96E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TDE_0406 f8bf2e050323b725063cd36cb784730e 539 Pfam PF09820 Predicted AAA-ATPase 10 295 1.2E-102 T 12-10-2018 IPR018631 AAA-ATPase-like domain TDE_0406 f8bf2e050323b725063cd36cb784730e 539 Pfam PF08011 PD-(D/E)XK nuclease superfamily 441 534 2.9E-23 T 12-10-2018 IPR012547 PD-(D/E)XK nuclease superfamily 9 TDE_0584 1fd1afbfef67d8b0df5cc872992375f1 312 Pfam PF03773 Predicted permease 7 302 1.3E-55 T 12-10-2018 IPR005524 Predicted permease DUF318 TDE_2531 19e04f7000ea77a88da637b0f9f739cc 74 SUPERFAMILY SSF47598 1 43 2.59E-5 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TDE_1628 99c167dd19d52aec3e77f883b3768817 125 Pfam PF10882 Bacterial PH domain 25 107 1.5E-6 T 12-10-2018 IPR027783 Bacterial Pleckstrin homology domain-related TDE_1681 b07ce86a0b6f4a01e21918e9cc478ea0 204 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 3 196 5.9E-46 T 12-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TDE_1681 b07ce86a0b6f4a01e21918e9cc478ea0 204 Pfam PF01813 ATP synthase subunit D 9 192 1.6E-43 T 12-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TDE_0724 30a6d8e9164bc016df47e341280ab90c 434 SUPERFAMILY SSF52096 132 428 3.48E-46 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TDE_0724 30a6d8e9164bc016df47e341280ab90c 434 Pfam PF03572 Peptidase family S41 196 410 2.3E-24 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TDE_0724 30a6d8e9164bc016df47e341280ab90c 434 Gene3D G3DSA:3.30.750.44 21 132 8.1E-6 T 12-10-2018 TDE_0241 33b937e8093a525d079d680a5fddee6b 200 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 11 196 7.5E-41 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_0241 33b937e8093a525d079d680a5fddee6b 200 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 8 196 2.1E-55 T 12-10-2018 IPR011733 Conserved hypothetical CHP02185, integral membrane TDE_1604 ae931ab07b46e07585e1cdac02d98c56 228 Pfam PF02361 Cobalt transport protein 13 197 1.2E-7 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_2163 066b517342c851c4056776ab1535592e 226 Pfam PF04298 Putative neutral zinc metallopeptidase 7 222 5.4E-90 T 12-10-2018 IPR007395 Putative neutral zinc metallopeptidase TDE_2608 fcdd464dd9e6ccebe2b3fc66f5e40051 372 Gene3D G3DSA:1.10.260.40 1 89 1.0E-25 T 12-10-2018 TDE_2608 fcdd464dd9e6ccebe2b3fc66f5e40051 372 SUPERFAMILY SSF47413 2 70 2.03E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TDE_2608 fcdd464dd9e6ccebe2b3fc66f5e40051 372 Pfam PF13413 Helix-turn-helix domain 8 68 3.6E-22 T 12-10-2018 TDE_2419 d65af2e2e52253c7634019ab62a0eb43 248 Gene3D G3DSA:2.160.20.120 31 248 6.6E-56 T 12-10-2018 TDE_2419 d65af2e2e52253c7634019ab62a0eb43 248 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 50 233 2.0E-43 T 12-10-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain TDE_2475 15db066da9a05c5e568eedcfef5fc1ff 463 Pfam PF01554 MatE 263 402 1.6E-9 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_2475 15db066da9a05c5e568eedcfef5fc1ff 463 Pfam PF01554 MatE 25 189 3.0E-26 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_2475 15db066da9a05c5e568eedcfef5fc1ff 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 425 1.9E-45 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TDE_2759 4e0de3781ad9af8482665d3a287736d8 236 Gene3D G3DSA:1.20.120.450 2 144 5.3E-7 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TDE_2523 a7bfac295e7d51b43bb51752659d7b6f 174 SUPERFAMILY SSF90123 2 152 2.62E-5 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TDE_0014 933c016a83cd8df4a4e4b68ebf50287b 205 ProDom PD155205 TRANSMEMBRANE MEMBRANE TP0733 TP0126 15 204 4.0E-107 T 12-10-2018 TDE_0806 cb46ffd94f6c06e8b03b69790fc6ec00 182 Pfam PF09851 Short C-terminal domain 153 180 3.0E-7 T 12-10-2018 IPR018649 SHOCT domain TDE_0806 cb46ffd94f6c06e8b03b69790fc6ec00 182 Pfam PF14470 Bacterial PH domain 33 123 3.7E-24 T 12-10-2018 IPR039519 YokE-like, PH domain TDE_0229 88d2f5d4f116f6477af35179f926a29e 626 SUPERFAMILY SSF55874 16 118 9.82E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_0229 88d2f5d4f116f6477af35179f926a29e 626 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 17 112 1.4E-8 T 12-10-2018 TDE_0229 88d2f5d4f116f6477af35179f926a29e 626 Gene3D G3DSA:3.30.565.10 15 111 2.3E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TDE_2117 945025d7652b417a897c32c9be5751cb 429 Gene3D G3DSA:1.25.40.10 365 415 8.5E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2117 945025d7652b417a897c32c9be5751cb 429 SUPERFAMILY SSF48452 343 414 3.8E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TDE_2117 945025d7652b417a897c32c9be5751cb 429 Pfam PF03687 Uncharacterised protein family (UPF0164) 9 331 1.5E-130 T 12-10-2018 IPR005362 Uncharacterised protein family UPF0164 TDE_2317 e25b4d7339e962a6c796000e2fdf9a4f 217 Pfam PF03006 Haemolysin-III related 11 210 9.6E-37 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 TDE_2317 e25b4d7339e962a6c796000e2fdf9a4f 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 216 6.9E-65 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 TDE_1938 a3d7af6af8b3887a124ce8fc969cde0c 288 Pfam PF04754 Putative transposase, YhgA-like 67 141 4.5E-6 T 12-10-2018 IPR006842 Transposase (putative), YhgA-like TDE_1938 a3d7af6af8b3887a124ce8fc969cde0c 288 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 288 1.2E-14 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA TDE_2227 79123a692525de88e64122dc201958ab 219 Pfam PF07099 Protein of unknown function (DUF1361) 45 204 1.8E-42 T 12-10-2018 IPR009793 Protein of unknown function DUF1361 TDE_1360 2d4ec591ca8ceacba6d11c5356efd35c 434 Pfam PF00860 Permease family 17 394 1.6E-43 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 TDE_1360 2d4ec591ca8ceacba6d11c5356efd35c 434 PIRSF PIRSF005353 1 434 7.5E-174 T 12-10-2018 IPR026033 Purine permease PbuG-like TDE_0176 e52cc1d05ecdd5f05c8e563746ff181d 332 Pfam PF06166 Protein of unknown function (DUF979) 14 332 9.8E-112 T 12-10-2018 IPR009323 Protein of unknown function DUF979 TDE_0857 d285fd4f1aff30ebc40b6ff742f5d9d1 401 Gene3D G3DSA:2.120.10.30 97 235 4.9E-7 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TDE_0857 d285fd4f1aff30ebc40b6ff742f5d9d1 401 SUPERFAMILY SSF63825 63 252 4.45E-5 T 12-10-2018 TDE_1436 433dcf0fef5d54c6f25d6f2c34bb6fef 916 Pfam PF02096 60Kd inner membrane protein 33 220 5.5E-22 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TDE_0513 616d47d9b7e8a070d91a32e0eab0e346 240 Pfam PF14080 Domain of unknown function (DUF4261) 165 238 1.0E-22 T 12-10-2018 IPR025357 Domain of unknown function DUF4261 TDE_0116 ba216ce0860a8a38dd477d9df228875d 293 Pfam PF03824 High-affinity nickel-transport protein 74 165 1.4E-12 T 12-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 TDE_0889 cf16f2a3fd233203216b1fe013b1a9dc 214 Pfam PF05628 Borrelia membrane protein P13 70 189 5.9E-9 T 12-10-2018 IPR008420 Borrelia membrane P13 TDE_1611 c3cfd0770d0d11e4591d9e632961a2a9 217 SUPERFAMILY SSF52141 19 214 3.27E-20 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TDE_1611 c3cfd0770d0d11e4591d9e632961a2a9 217 Gene3D G3DSA:3.40.470.10 15 217 2.9E-24 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TDE_0151 4e194d4b6e152abe846cb32dbe4e4525 418 Pfam PF04143 Sulphur transport 45 406 3.7E-67 T 12-10-2018 IPR007272 Sulphur transport domain TDE_1148 37fc4e31d9f5a8b1e7c8fafd62226235 127 Gene3D G3DSA:2.60.120.1110 4 127 7.1E-28 T 12-10-2018 TDE_2743 2d506411dd047b041a747fe444e2f4ac 175 Gene3D G3DSA:3.90.220.20 15 147 2.6E-29 T 12-10-2018 TDE_2743 2d506411dd047b041a747fe444e2f4ac 175 Pfam PF01420 Type I restriction modification DNA specificity domain 24 169 1.6E-19 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TDE_2743 2d506411dd047b041a747fe444e2f4ac 175 SUPERFAMILY SSF116734 21 170 1.19E-32 T 12-10-2018 TDE_2463 756984da76005ccf90ffe9fc27b7b548 207 Pfam PF04205 FMN-binding domain 46 144 6.6E-7 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TDE_2463 756984da76005ccf90ffe9fc27b7b548 207 SMART SM00900 46 147 5.0E-8 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TDE_0003 93d874c8d109147511587078ea5ab5d5 239 Pfam PF16481 Domain of unknown function (DUF5058) 5 228 5.7E-72 T 12-10-2018 IPR032479 Protein of unknown function DUF5058 TDE_0071 51e78c4e469582b71713a424ced2ea1d 746 Pfam PF01136 Peptidase family U32 75 291 5.4E-79 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 TDE_0716 765418e90171dd72261c6e6ac052d2d2 278 Pfam PF02517 CAAX protease self-immunity 143 232 2.3E-23 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TDE_2253 2b6c3e700cd8584d0401185eaec4c5a4 138 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 9 108 8.0E-8 T 12-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system TDE_2253 2b6c3e700cd8584d0401185eaec4c5a4 138 SUPERFAMILY SSF143100 7 70 5.36E-10 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like TDE_2253 2b6c3e700cd8584d0401185eaec4c5a4 138 Gene3D G3DSA:3.30.160.250 2 98 6.4E-19 T 12-10-2018 TDE_2769 98e726c8c3232b6e438f9850c51ae644 169 Pfam PF03963 Flagellar hook capping protein - N-terminal region 49 106 2.0E-21 T 12-10-2018 IPR005648 Flagellar hook capping protein TDE_2112 dbc61c42571b5c1d527fe910def9754a 495 Pfam PF09822 ABC-type uncharacterized transport system 29 285 7.1E-41 T 12-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 TDE_2465 48aa6bc60210f8dd40333e79a74e822c 86 Pfam PF11823 Protein of unknown function (DUF3343) 3 58 2.3E-12 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 TDE_0219 8b78f11d9e987494ea1eefe25456a1ee 162 Pfam PF05258 Protein of unknown function (DUF721) 31 101 7.5E-8 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 TDE_2229 2856c56621eabcd296b1d90700ec35d0 81 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 1 80 6.6E-9 T 12-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system TDE_2653 731b5604f4127c4594b1a73a0993520f 257 Pfam PF06182 ABC-2 family transporter protein 32 256 6.4E-34 T 12-10-2018 IPR010390 Protein of unknown function DUF990 TDE_0760 392f8d411986a0a79761b03f87403446 165 Pfam PF14343 PrcB C-terminal 87 142 9.8E-12 T 12-10-2018 IPR025748 PrcB C-terminal domain TDE_0242 6307d711110e773ee5a859c8279821cb 236 Pfam PF02361 Cobalt transport protein 3 202 8.5E-14 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_2492 66514bc6f7ec1a7e0cd4d71c2f356389 301 Pfam PF01145 SPFH domain / Band 7 family 30 199 6.5E-6 T 12-10-2018 IPR001107 Band 7 domain TDE_2784 a63b793ea5684ac9c6f4b668f2d45faa 569 Pfam PF17239 Family of unknown function (DUF5312) 6 558 3.9E-221 T 12-10-2018 IPR035196 Protein of unknown function DUF5312 TDE_1876 e6c61b5f654a79397bc19653ffb777a7 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 61 226 1.7E-27 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 TDE_1952 d59f643b82a0e566ec16d11f56122cb3 216 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 66 210 1.6E-25 T 12-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase TDE_0288 967da1e015518df7abeba42195f51282 306 Pfam PF14132 Domain of unknown function (DUF4299) 2 304 1.4E-132 T 12-10-2018 IPR025387 Protein of unknown function DUF4299 TDE_2231 2cbbb28684bfd9e572b20912a6d36ecb 273 Gene3D G3DSA:3.80.10.10 52 272 7.7E-47 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily TDE_2231 2cbbb28684bfd9e572b20912a6d36ecb 273 SUPERFAMILY SSF52058 77 269 6.12E-25 T 12-10-2018 TDE_2623 decd94bff1710f637edd1484801d7b56 246 Pfam PF02361 Cobalt transport protein 18 203 1.2E-16 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_1534 e211becacb65d18a2aee3dd0a4bca971 153 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 35 145 6.0E-10 T 12-10-2018 TDE_2711 3383d5b34226237aed3d1480903166be 299 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 226 6.0E-47 T 12-10-2018 TDE_2133 f7a1ff5fec2ef9082a26a0bfbf795f99 264 Pfam PF02361 Cobalt transport protein 35 223 1.8E-19 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TDE_1319 43564851b2536de5d3f901195c9ea9e8 390 SUPERFAMILY SSF48371 109 367 6.62E-7 T 12-10-2018 IPR016024 Armadillo-type fold TDE_2366 250e073f6cbfb5a9ef3ee58e7ab9fc24 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 283 4.7E-43 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TDE_2409 785aa2b0552ed0237cf7e26f8e116175 173 Pfam PF03729 Short repeat of unknown function (DUF308) 15 58 1.0E-7 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane TDE_2409 785aa2b0552ed0237cf7e26f8e116175 173 Pfam PF03729 Short repeat of unknown function (DUF308) 66 135 5.6E-9 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane TDE_1955 1e95c18fa89951b18dcaca033281a13c 236 Gene3D G3DSA:3.40.50.1860 137 233 7.0E-5 T 12-10-2018 TDE_0485 c0f031210a895e34f34261c028a361e6 261 Pfam PF06182 ABC-2 family transporter protein 41 260 2.8E-38 T 12-10-2018 IPR010390 Protein of unknown function DUF990 TDE_0036 766c3c1cf134a2c915030716e5c634c9 130 SUPERFAMILY SSF88723 1 109 2.9E-7 T 12-10-2018 IPR029060 PIN-like domain superfamily TDE_2213 914e76cd07eefdfe46c4e76922eb56ef 85 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 23 82 1.2E-10 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TDE_0876 78414bd53ead78ceb9c577dc17727273 61 Gene3D G3DSA:1.10.260.40 12 61 2.5E-5 T 12-10-2018 TDE_0876 78414bd53ead78ceb9c577dc17727273 61 Pfam PF01381 Helix-turn-helix 13 53 1.7E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TDE_1855 63b39abb4c04dec46a41966fa4d7bcf4 95 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 26 56 5.5E-8 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 TDE_0264 e2d579054b5f51b3690fd15e59803fe7 88 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 13 81 2.3E-14 T 12-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system TDE_2758 d0ff24913c48d623a2d587bbb5abaa71 118 Pfam PF01934 Protein of unknown function DUF86 15 105 1.0E-25 T 12-10-2018 IPR008201 Protein of unknown function DUF86 TDE_2729 4ac5c4b030c81b22628d1b16ad0ae12f 233 Pfam PF07947 YhhN family 38 226 8.4E-36 T 12-10-2018 IPR012506 YhhN-like GO:0016021