locus-tag class description E4N86_00005 PF00308 Bacterial dnaA protein E4N86_00005 PF08299 Bacterial dnaA protein helix-turn-helix E4N86_00005 PF11638 DnaA N-terminal domain E4N86_00015 PF07733 Bacterial DNA polymerase III alpha NTPase domain E4N86_00015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E4N86_00015 PF14579 Helix-hairpin-helix motif E4N86_00015 PF02811 PHP domain E4N86_00025 PF17239 Family of unknown function (DUF5312) E4N86_00040 PF00664 ABC transporter transmembrane region E4N86_00040 PF00005 ABC transporter E4N86_00050 PF00005 ABC transporter E4N86_00050 PF00664 ABC transporter transmembrane region E4N86_00055 PF00005 ABC transporter E4N86_00055 PF00664 ABC transporter transmembrane region E4N86_00075 PF00561 alpha/beta hydrolase fold E4N86_00085 PF01032 FecCD transport family E4N86_00090 PF00005 ABC transporter E4N86_00095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E4N86_00095 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E4N86_00105 PF01799 [2Fe-2S] binding domain E4N86_00105 PF00111 2Fe-2S iron-sulfur cluster binding domain E4N86_00115 PF02625 XdhC and CoxI family E4N86_00115 PF13478 XdhC Rossmann domain E4N86_00120 PF02028 BCCT, betaine/carnitine/choline family transporter E4N86_00125 PF00221 Aromatic amino acid lyase E4N86_00145 PF03963 Flagellar hook capping protein - N-terminal region E4N86_00150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N86_00150 PF00460 Flagella basal body rod protein E4N86_00150 PF07559 Flagellar basal body protein FlaE E4N86_00160 PF01618 MotA/TolQ/ExbB proton channel family E4N86_00165 PF13677 Membrane MotB of proton-channel complex MotA/MotB E4N86_00165 PF00691 OmpA family E4N86_00170 PF03748 Flagellar basal body-associated protein FliL E4N86_00175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4N86_00175 PF02154 Flagellar motor switch protein FliM E4N86_00180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E4N86_00180 PF04509 CheC-like family E4N86_00190 PF00813 FliP family E4N86_00215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_00220 PF01551 Peptidase family M23 E4N86_00220 PF04225 Opacity-associated protein A LysM-like domain E4N86_00240 PF16360 GTP-binding GTPase Middle Region E4N86_00240 PF13167 GTP-binding GTPase N-terminal E4N86_00240 PF01926 50S ribosome-binding GTPase E4N86_00270 PF00155 Aminotransferase class I and II E4N86_00275 PF00448 SRP54-type protein, GTPase domain E4N86_00280 PF10609 NUBPL iron-transfer P-loop NTPase E4N86_00290 PF04545 Sigma-70, region 4 E4N86_00290 PF04539 Sigma-70 region 3 E4N86_00290 PF04542 Sigma-70 region 2 E4N86_00320 PF00291 Pyridoxal-phosphate dependent enzyme E4N86_00350 PF01066 CDP-alcohol phosphatidyltransferase E4N86_00355 PF00464 Serine hydroxymethyltransferase E4N86_00365 PF00478 IMP dehydrogenase / GMP reductase domain E4N86_00365 PF00571 CBS domain E4N86_00370 PF00133 tRNA synthetases class I (I, L, M and V) E4N86_00370 PF08264 Anticodon-binding domain of tRNA E4N86_00390 PF11849 Domain of unknown function (DUF3369) E4N86_00395 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4N86_00400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4N86_00405 PF06180 Cobalt chelatase (CbiK) E4N86_00420 PF00005 ABC transporter E4N86_00430 PF00664 ABC transporter transmembrane region E4N86_00430 PF00005 ABC transporter E4N86_00435 PF03099 Biotin/lipoate A/B protein ligase family E4N86_00435 PF10437 Bacterial lipoate protein ligase C-terminus E4N86_00440 PF00571 CBS domain E4N86_00440 PF00005 ABC transporter E4N86_00450 PF04324 BFD-like [2Fe-2S] binding domain E4N86_00450 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_00455 PF01266 FAD dependent oxidoreductase E4N86_00455 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E4N86_00465 PF02661 Fic/DOC family E4N86_00465 PF12728 Helix-turn-helix domain E4N86_00475 PF08439 Oligopeptidase F E4N86_00475 PF01432 Peptidase family M3 E4N86_00495 PF04954 Siderophore-interacting protein E4N86_00495 PF08021 Siderophore-interacting FAD-binding domain E4N86_00495 PF00005 ABC transporter E4N86_00495 PF00664 ABC transporter transmembrane region E4N86_00500 PF00664 ABC transporter transmembrane region E4N86_00500 PF00005 ABC transporter E4N86_00515 PF00005 ABC transporter E4N86_00520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E4N86_00525 PF05958 tRNA (Uracil-5-)-methyltransferase E4N86_00540 PF00027 Cyclic nucleotide-binding domain E4N86_00540 PF13545 Crp-like helix-turn-helix domain E4N86_00545 PF01252 Signal peptidase (SPase) II E4N86_00550 PF02424 ApbE family E4N86_00570 PF18693 TRAM domain E4N86_00570 PF00919 Uncharacterized protein family UPF0004 E4N86_00570 PF04055 Radical SAM superfamily E4N86_00575 PF13464 Domain of unknown function (DUF4115) E4N86_00585 PF17391 Urocanase N-terminal domain E4N86_00585 PF17392 Urocanase C-terminal domain E4N86_00585 PF01175 Urocanase Rossmann-like domain E4N86_00590 PF00300 Histidine phosphatase superfamily (branch 1) E4N86_00595 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4N86_00600 PF12368 Rhodanase C-terminal E4N86_00600 PF00581 Rhodanese-like domain E4N86_00600 PF17773 UPF0176 acylphosphatase like domain E4N86_00605 PF03880 DbpA RNA binding domain E4N86_00610 PF06505 Activator of aromatic catabolism E4N86_00610 PF02954 Bacterial regulatory protein, Fis family E4N86_00610 PF02830 V4R domain E4N86_00610 PF00158 Sigma-54 interaction domain E4N86_00630 PF00834 Ribulose-phosphate 3 epimerase family E4N86_00640 PF02223 Thymidylate kinase E4N86_00650 PF07244 Surface antigen variable number repeat E4N86_00650 PF01103 Surface antigen E4N86_00660 PF05192 MutS domain III E4N86_00660 PF05190 MutS family domain IV E4N86_00660 PF01624 MutS domain I E4N86_00660 PF05188 MutS domain II E4N86_00660 PF00488 MutS domain V E4N86_00665 PF05958 tRNA (Uracil-5-)-methyltransferase E4N86_00690 PF12169 DNA polymerase III subunits gamma and tau domain III E4N86_00695 PF03577 Peptidase family C69 E4N86_00710 PF00990 Diguanylate cyclase, GGDEF domain E4N86_00715 PF00990 Diguanylate cyclase, GGDEF domain E4N86_00720 PF00271 Helicase conserved C-terminal domain E4N86_00720 PF00270 DEAD/DEAH box helicase E4N86_00720 PF17191 RecG wedge domain E4N86_00725 PF00005 ABC transporter E4N86_00730 PF00849 RNA pseudouridylate synthase E4N86_00740 PF01926 50S ribosome-binding GTPase E4N86_00745 PF00342 Phosphoglucose isomerase E4N86_00750 PF08011 PD-(D/E)XK nuclease superfamily E4N86_00750 PF09820 Predicted AAA-ATPase E4N86_00755 PF01066 CDP-alcohol phosphatidyltransferase E4N86_00760 PF02229 Transcriptional Coactivator p15 (PC4) E4N86_00765 PF00075 RNase H E4N86_00770 PF00793 DAHP synthetase I family E4N86_00775 PF02568 Thiamine biosynthesis protein (ThiI) E4N86_00775 PF02926 THUMP domain E4N86_00795 PF00950 ABC 3 transport family E4N86_00800 PF00005 ABC transporter E4N86_00810 PF00005 ABC transporter E4N86_00810 PF00664 ABC transporter transmembrane region E4N86_00815 PF00664 ABC transporter transmembrane region E4N86_00815 PF00005 ABC transporter E4N86_00825 PF02570 Precorrin-8X methylmutase E4N86_00830 PF01430 Hsp33 protein E4N86_00835 PF01921 tRNA synthetases class I (K) E4N86_00850 PF02743 Cache domain E4N86_00850 PF00672 HAMP domain E4N86_00850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_00855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4N86_00855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4N86_00890 PF00391 PEP-utilising enzyme, mobile domain E4N86_00890 PF00224 Pyruvate kinase, barrel domain E4N86_00890 PF02887 Pyruvate kinase, alpha/beta domain E4N86_00895 PF00730 HhH-GPD superfamily base excision DNA repair protein E4N86_00925 PF00149 Calcineurin-like phosphoesterase E4N86_00940 PF04536 TPM domain E4N86_00955 PF01973 Protein of unknown function DUF115 E4N86_00960 PF00005 ABC transporter E4N86_00965 PF00005 ABC transporter E4N86_00985 PF09820 Predicted AAA-ATPase E4N86_00985 PF08011 PD-(D/E)XK nuclease superfamily E4N86_00990 PF06745 KaiC E4N86_00990 PF18073 Rubredoxin metal binding domain E4N86_01010 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_01020 PF02527 rRNA small subunit methyltransferase G E4N86_01025 PF00171 Aldehyde dehydrogenase family E4N86_01030 PF00664 ABC transporter transmembrane region E4N86_01030 PF00005 ABC transporter E4N86_01035 PF00005 ABC transporter E4N86_01035 PF00664 ABC transporter transmembrane region E4N86_01055 PF00814 Glycoprotease family E4N86_01065 PF00512 His Kinase A (phospho-acceptor) domain E4N86_01065 PF01627 Hpt domain E4N86_01065 PF00072 Response regulator receiver domain E4N86_01065 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) E4N86_01065 PF00672 HAMP domain E4N86_01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N86_01070 PF00072 Response regulator receiver domain E4N86_01070 PF00486 Transcriptional regulatory protein, C terminal E4N86_01080 PF08241 Methyltransferase domain E4N86_01090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_01090 PF02743 Cache domain E4N86_01090 PF00672 HAMP domain E4N86_01105 PF03167 Uracil DNA glycosylase superfamily E4N86_01110 PF00270 DEAD/DEAH box helicase E4N86_01110 PF00271 Helicase conserved C-terminal domain E4N86_01110 PF17764 3′ DNA-binding domain (3′BD) E4N86_01110 PF18074 Primosomal protein N C-terminal domain E4N86_01110 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E4N86_01125 PF09820 Predicted AAA-ATPase E4N86_01125 PF08011 PD-(D/E)XK nuclease superfamily E4N86_01130 PF01541 GIY-YIG catalytic domain E4N86_01130 PF02151 UvrB/uvrC motif E4N86_01130 PF08459 UvrC Helix-hairpin-helix N-terminal E4N86_01135 PF03841 L-seryl-tRNA selenium transferase E4N86_01135 PF12390 Selenocysteine synthase N terminal E4N86_01145 PF00696 Amino acid kinase family E4N86_01150 PF01554 MatE E4N86_01155 PF01165 Ribosomal protein S21 E4N86_01160 PF02694 Uncharacterised BCR, YnfA/UPF0060 family E4N86_01165 PF00438 S-adenosylmethionine synthetase, N-terminal domain E4N86_01165 PF02772 S-adenosylmethionine synthetase, central domain E4N86_01165 PF02773 S-adenosylmethionine synthetase, C-terminal domain E4N86_01180 PF01206 Sulfurtransferase TusA E4N86_01200 PF00266 Aminotransferase class-V E4N86_01235 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_01240 PF02547 Queuosine biosynthesis protein E4N86_01245 PF12796 Ankyrin repeats (3 copies) E4N86_01250 PF01871 AMMECR1 E4N86_01250 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase E4N86_01260 PF01202 Shikimate kinase E4N86_01265 PF00390 Malic enzyme, N-terminal domain E4N86_01265 PF03949 Malic enzyme, NAD binding domain E4N86_01275 PF03412 Peptidase C39 family E4N86_01275 PF00005 ABC transporter E4N86_01275 PF00664 ABC transporter transmembrane region E4N86_01280 PF05343 M42 glutamyl aminopeptidase E4N86_01320 PF00664 ABC transporter transmembrane region E4N86_01320 PF03412 Peptidase C39 family E4N86_01320 PF00005 ABC transporter E4N86_01340 PF00471 Ribosomal protein L33 E4N86_01350 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E4N86_01355 PF02357 Transcription termination factor nusG E4N86_01355 PF00467 KOW motif E4N86_01360 PF03946 Ribosomal protein L11, N-terminal domain E4N86_01360 PF00298 Ribosomal protein L11, RNA binding domain E4N86_01365 PF00687 Ribosomal protein L1p/L10e family E4N86_01370 PF00466 Ribosomal protein L10 E4N86_01375 PF00542 Ribosomal protein L7/L12 C-terminal domain E4N86_01375 PF16320 Ribosomal protein L7/L12 dimerisation domain E4N86_01380 PF00562 RNA polymerase Rpb2, domain 6 E4N86_01380 PF10385 RNA polymerase beta subunit external 1 domain E4N86_01380 PF04565 RNA polymerase Rpb2, domain 3 E4N86_01380 PF04561 RNA polymerase Rpb2, domain 2 E4N86_01380 PF04563 RNA polymerase beta subunit E4N86_01380 PF04560 RNA polymerase Rpb2, domain 7 E4N86_01385 PF05000 RNA polymerase Rpb1, domain 4 E4N86_01385 PF04998 RNA polymerase Rpb1, domain 5 E4N86_01385 PF04983 RNA polymerase Rpb1, domain 3 E4N86_01385 PF00623 RNA polymerase Rpb1, domain 2 E4N86_01385 PF04997 RNA polymerase Rpb1, domain 1 E4N86_01395 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_01395 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_01400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_01400 PF00005 ABC transporter E4N86_01440 PF00343 Carbohydrate phosphorylase E4N86_01445 PF00155 Aminotransferase class I and II E4N86_01455 PF00580 UvrD/REP helicase N-terminal domain E4N86_01455 PF13361 UvrD-like helicase C-terminal domain E4N86_01465 PF00005 ABC transporter E4N86_01480 PF00664 ABC transporter transmembrane region E4N86_01480 PF00005 ABC transporter E4N86_01515 PF00664 ABC transporter transmembrane region E4N86_01515 PF00005 ABC transporter E4N86_01545 PF00664 ABC transporter transmembrane region E4N86_01545 PF00005 ABC transporter E4N86_01550 PF00664 ABC transporter transmembrane region E4N86_01550 PF00005 ABC transporter E4N86_01555 PF00664 ABC transporter transmembrane region E4N86_01555 PF00005 ABC transporter E4N86_01560 PF08021 Siderophore-interacting FAD-binding domain E4N86_01560 PF00005 ABC transporter E4N86_01560 PF00664 ABC transporter transmembrane region E4N86_01560 PF04954 Siderophore-interacting protein E4N86_01580 PF00005 ABC transporter E4N86_01585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4N86_01585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4N86_01595 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E4N86_01595 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E4N86_01600 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N86_01605 PF00871 Acetokinase family E4N86_01610 PF00166 Chaperonin 10 Kd subunit E4N86_01615 PF04539 Sigma-70 region 3 E4N86_01615 PF04545 Sigma-70, region 4 E4N86_01615 PF03979 Sigma-70 factor, region 1.1 E4N86_01615 PF00140 Sigma-70 factor, region 1.2 E4N86_01615 PF04542 Sigma-70 region 2 E4N86_01620 PF01170 Putative RNA methylase family UPF0020 E4N86_01620 PF02926 THUMP domain E4N86_01625 PF01963 TraB family E4N86_01635 PF00877 NlpC/P60 family E4N86_01640 PF13193 AMP-binding enzyme C-terminal domain E4N86_01640 PF00501 AMP-binding enzyme E4N86_01645 PF03144 Elongation factor Tu domain 2 E4N86_01645 PF00009 Elongation factor Tu GTP binding domain E4N86_01645 PF03764 Elongation factor G, domain IV E4N86_01645 PF14492 Elongation Factor G, domain II E4N86_01645 PF00679 Elongation factor G C-terminus E4N86_01655 PF00113 Enolase, C-terminal TIM barrel domain E4N86_01655 PF03952 Enolase, N-terminal domain E4N86_01675 PF02608 ABC transporter substrate-binding protein PnrA-like E4N86_01680 PF00005 ABC transporter E4N86_01685 PF02653 Branched-chain amino acid transport system / permease component E4N86_01690 PF02653 Branched-chain amino acid transport system / permease component E4N86_01695 PF04011 LemA family E4N86_01700 PF04536 TPM domain E4N86_01705 PF03009 Glycerophosphoryl diester phosphodiesterase family E4N86_01710 PF01734 Patatin-like phospholipase E4N86_01715 PF07009 NusG domain II E4N86_01720 PF08666 SAF domain E4N86_01720 PF03102 NeuB family E4N86_01725 PF00226 DnaJ domain E4N86_01725 PF01556 DnaJ C terminal domain E4N86_01725 PF00684 DnaJ central domain E4N86_01735 PF11799 impB/mucB/samB family C-terminal domain E4N86_01735 PF11798 IMS family HHH motif E4N86_01735 PF00817 impB/mucB/samB family E4N86_01745 PF13277 YmdB-like protein E4N86_01750 PF01026 TatD related DNase E4N86_01760 PF01132 Elongation factor P (EF-P) OB domain E4N86_01760 PF09285 Elongation factor P, C-terminal E4N86_01760 PF08207 Elongation factor P (EF-P) KOW-like domain E4N86_01765 PF05746 DALR anticodon binding domain E4N86_01765 PF00750 tRNA synthetases class I (R) E4N86_01765 PF03485 Arginyl tRNA synthetase N terminal domain E4N86_01770 PF00156 Phosphoribosyl transferase domain E4N86_01775 PF04002 RadC-like JAB domain E4N86_01790 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_01805 PF00768 D-alanyl-D-alanine carboxypeptidase E4N86_01805 PF07943 Penicillin-binding protein 5, C-terminal domain E4N86_01810 PF00152 tRNA synthetases class II (D, K and N) E4N86_01810 PF01336 OB-fold nucleic acid binding domain E4N86_01820 PF01180 Dihydroorotate dehydrogenase E4N86_01825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_01830 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_01835 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_01835 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_01840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_01845 PF00005 ABC transporter E4N86_01845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_01850 PF00005 ABC transporter E4N86_01850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_01855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_01860 PF00830 Ribosomal L28 family E4N86_01880 PF01204 Trehalase E4N86_01885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E4N86_01885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E4N86_01895 PF01226 Formate/nitrite transporter E4N86_01900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E4N86_01900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E4N86_01905 PF00156 Phosphoribosyl transferase domain E4N86_01910 PF00700 Bacterial flagellin C-terminal helical region E4N86_01910 PF00669 Bacterial flagellin N-terminal helical region E4N86_01920 PF00460 Flagella basal body rod protein E4N86_01920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N86_01925 PF00460 Flagella basal body rod protein E4N86_01925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N86_01930 PF10135 Rod binding protein E4N86_01935 PF02743 Cache domain E4N86_01935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_01935 PF00672 HAMP domain E4N86_01940 PF17760 UvrA interaction domain E4N86_01940 PF17755 UvrA DNA-binding domain E4N86_01940 PF00005 ABC transporter E4N86_01950 PF09371 Tex-like protein N-terminal domain E4N86_01950 PF00575 S1 RNA binding domain E4N86_01950 PF17674 HHH domain E4N86_01950 PF16921 Tex protein YqgF-like domain E4N86_01955 PF01814 Hemerythrin HHE cation binding domain E4N86_01965 PF13654 AAA domain E4N86_01965 PF05362 Lon protease (S16) C-terminal proteolytic domain E4N86_01970 PF02601 Exonuclease VII, large subunit E4N86_01970 PF13742 OB-fold nucleic acid binding domain E4N86_01980 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component E4N86_01990 PF16811 TRAP transporter T-component E4N86_02000 PF02310 B12 binding domain E4N86_02005 PF13941 MutL protein E4N86_02010 PF01783 Ribosomal L32p protein family E4N86_02015 PF00550 Phosphopantetheine attachment site E4N86_02020 PF14622 Ribonuclease-III-like E4N86_02020 PF00035 Double-stranded RNA binding motif E4N86_02025 PF00011 Hsp20/alpha crystallin family E4N86_02045 PF13735 tRNA nucleotidyltransferase domain 2 putative E4N86_02045 PF12627 Probable RNA and SrmB- binding site of polymerase A E4N86_02045 PF01743 Poly A polymerase head domain E4N86_02050 PF01544 CorA-like Mg2+ transporter protein E4N86_02070 PF02719 Polysaccharide biosynthesis protein E4N86_02075 PF01687 Riboflavin kinase E4N86_02075 PF06574 FAD synthetase E4N86_02080 PF00312 Ribosomal protein S15 E4N86_02085 PF00013 KH domain E4N86_02085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E4N86_02085 PF01138 3' exoribonuclease family, domain 1 E4N86_02085 PF03725 3' exoribonuclease family, domain 2 E4N86_02085 PF00575 S1 RNA binding domain E4N86_02090 PF00692 dUTPase E4N86_02105 PF04304 Protein of unknown function (DUF454) E4N86_02110 PF00164 Ribosomal protein S12/S23 E4N86_02115 PF00177 Ribosomal protein S7p/S5e E4N86_02120 PF03144 Elongation factor Tu domain 2 E4N86_02120 PF00009 Elongation factor Tu GTP binding domain E4N86_02120 PF03764 Elongation factor G, domain IV E4N86_02120 PF14492 Elongation Factor G, domain II E4N86_02120 PF00679 Elongation factor G C-terminus E4N86_02135 PF00301 Rubredoxin E4N86_02145 PF00672 HAMP domain E4N86_02145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_02145 PF02743 Cache domain E4N86_02155 PF01554 MatE E4N86_02160 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_02165 PF00005 ABC transporter E4N86_02170 PF00005 ABC transporter E4N86_02180 PF01588 Putative tRNA binding domain E4N86_02180 PF09334 tRNA synthetases class I (M) E4N86_02185 PF13635 Domain of unknown function (DUF4143) E4N86_02185 PF13173 AAA domain E4N86_02195 PF00005 ABC transporter E4N86_02195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_02200 PF00005 ABC transporter E4N86_02200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_02205 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_02205 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_02210 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_02215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_02225 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_02230 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_02230 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_02235 PF00005 ABC transporter E4N86_02235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_02240 PF00005 ABC transporter E4N86_02240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_02245 PF13186 Iron-sulfur cluster-binding domain E4N86_02245 PF04055 Radical SAM superfamily E4N86_02255 PF04055 Radical SAM superfamily E4N86_02255 PF06463 Molybdenum Cofactor Synthesis C E4N86_02270 PF00753 Metallo-beta-lactamase superfamily E4N86_02270 PF01613 Flavin reductase like domain E4N86_02275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E4N86_02280 PF00398 Ribosomal RNA adenine dimethylase E4N86_02290 PF00849 RNA pseudouridylate synthase E4N86_02295 PF01479 S4 domain E4N86_02295 PF00849 RNA pseudouridylate synthase E4N86_02300 PF02875 Mur ligase family, glutamate ligase domain E4N86_02300 PF08245 Mur ligase middle domain E4N86_02305 PF01225 Mur ligase family, catalytic domain E4N86_02305 PF02875 Mur ligase family, glutamate ligase domain E4N86_02305 PF08245 Mur ligase middle domain E4N86_02310 PF08340 Domain of unknown function (DUF1732) E4N86_02310 PF03755 YicC-like family, N-terminal region E4N86_02330 PF03129 Anticodon binding domain E4N86_02330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N86_02330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4N86_02345 PF16258 Domain of unknown function (DUF4912) E4N86_02360 PF00005 ABC transporter E4N86_02365 PF01891 Cobalt uptake substrate-specific transmembrane region E4N86_02400 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E4N86_02405 PF10431 C-terminal, D2-small domain, of ClpB protein E4N86_02405 PF02861 Clp amino terminal domain, pathogenicity island component E4N86_02405 PF00004 ATPase family associated with various cellular activities (AAA) E4N86_02405 PF07724 AAA domain (Cdc48 subfamily) E4N86_02405 PF17871 AAA lid domain E4N86_02410 PF02617 ATP-dependent Clp protease adaptor protein ClpS E4N86_02420 PF02677 Epoxyqueuosine reductase QueH E4N86_02425 PF09338 Glycine/sarcosine/betaine reductase component B subunits E4N86_02445 PF00664 ABC transporter transmembrane region E4N86_02445 PF00005 ABC transporter E4N86_02450 PF00521 DNA gyrase/topoisomerase IV, subunit A E4N86_02455 PF03687 Uncharacterised protein family (UPF0164) E4N86_02470 PF00005 ABC transporter E4N86_02470 PF13732 Domain of unknown function (DUF4162) E4N86_02490 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E4N86_02495 PF00270 DEAD/DEAH box helicase E4N86_02495 PF00271 Helicase conserved C-terminal domain E4N86_02505 PF01979 Amidohydrolase family E4N86_02540 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_02565 PF07075 Protein of unknown function (DUF1343) E4N86_02570 PF00144 Beta-lactamase E4N86_02580 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4N86_02585 PF00497 Bacterial extracellular solute-binding proteins, family 3 E4N86_02590 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E4N86_02590 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E4N86_02595 PF02881 SRP54-type protein, helical bundle domain E4N86_02595 PF00448 SRP54-type protein, GTPase domain E4N86_02595 PF02978 Signal peptide binding domain E4N86_02600 PF01258 Prokaryotic dksA/traR C4-type zinc finger E4N86_02605 PF01176 Translation initiation factor 1A / IF-1 E4N86_02610 PF00226 DnaJ domain E4N86_02610 PF01556 DnaJ C terminal domain E4N86_02610 PF00684 DnaJ central domain E4N86_02615 PF00696 Amino acid kinase family E4N86_02615 PF01472 PUA domain E4N86_02620 PF00588 SpoU rRNA Methylase family E4N86_02635 PF00575 S1 RNA binding domain E4N86_02640 PF02954 Bacterial regulatory protein, Fis family E4N86_02640 PF00072 Response regulator receiver domain E4N86_02640 PF00158 Sigma-54 interaction domain E4N86_02660 PF00990 Diguanylate cyclase, GGDEF domain E4N86_02660 PF08448 PAS fold E4N86_02660 PF00563 EAL domain E4N86_02660 PF08447 PAS fold E4N86_02665 PF04055 Radical SAM superfamily E4N86_02690 PF01042 Endoribonuclease L-PSP E4N86_02695 PF01119 DNA mismatch repair protein, C-terminal domain E4N86_02695 PF08676 MutL C terminal dimerisation domain E4N86_02700 PF02609 Exonuclease VII small subunit E4N86_02705 PF00005 ABC transporter E4N86_02710 PF00005 ABC transporter E4N86_02720 PF04023 FeoA domain E4N86_02725 PF07670 Nucleoside recognition E4N86_02725 PF02421 Ferrous iron transport protein B E4N86_02725 PF07664 Ferrous iron transport protein B C terminus E4N86_02725 PF04023 FeoA domain E4N86_02725 PF17910 FeoB cytosolic helical domain E4N86_02770 PF00266 Aminotransferase class-V E4N86_02790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_02805 PF03462 PCRF domain E4N86_02805 PF00472 RF-1 domain E4N86_02820 PF00448 SRP54-type protein, GTPase domain E4N86_02820 PF02881 SRP54-type protein, helical bundle domain E4N86_02830 PF12704 MacB-like periplasmic core domain E4N86_02830 PF02687 FtsX-like permease family E4N86_02835 PF00005 ABC transporter E4N86_02845 PF02151 UvrB/uvrC motif E4N86_02850 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain E4N86_02855 PF02861 Clp amino terminal domain, pathogenicity island component E4N86_02855 PF10431 C-terminal, D2-small domain, of ClpB protein E4N86_02855 PF07724 AAA domain (Cdc48 subfamily) E4N86_02855 PF17871 AAA lid domain E4N86_02855 PF00004 ATPase family associated with various cellular activities (AAA) E4N86_02860 PF00483 Nucleotidyl transferase E4N86_02865 PF13439 Glycosyltransferase Family 4 E4N86_02865 PF00534 Glycosyl transferases group 1 E4N86_02875 PF03330 Lytic transglycolase E4N86_02885 PF01026 TatD related DNase E4N86_02895 PF00691 OmpA family E4N86_02945 PF17131 Outer membrane lipoprotein-sorting protein E4N86_02950 PF00664 ABC transporter transmembrane region E4N86_02950 PF00005 ABC transporter E4N86_02955 PF00664 ABC transporter transmembrane region E4N86_02955 PF00005 ABC transporter E4N86_02955 PF08021 Siderophore-interacting FAD-binding domain E4N86_02955 PF04954 Siderophore-interacting protein E4N86_02965 PF00440 Bacterial regulatory proteins, tetR family E4N86_02985 PF01432 Peptidase family M3 E4N86_02985 PF08439 Oligopeptidase F E4N86_02990 PF00005 ABC transporter E4N86_02995 PF00929 Exonuclease E4N86_03000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4N86_03000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4N86_03000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4N86_03000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4N86_03010 PF01078 Magnesium chelatase, subunit ChlI E4N86_03010 PF13335 Magnesium chelatase, subunit ChlI C-terminal E4N86_03015 PF01523 Putative modulator of DNA gyrase E4N86_03025 PF05872 Bacterial protein of unknown function (DUF853) E4N86_03030 PF10502 Signal peptidase, peptidase S26 E4N86_03035 PF03717 Penicillin-binding Protein dimerisation domain E4N86_03035 PF00905 Penicillin binding protein transpeptidase domain E4N86_03060 PF03772 Competence protein E4N86_03060 PF13567 Domain of unknown function (DUF4131) E4N86_03060 PF00753 Metallo-beta-lactamase superfamily E4N86_03065 PF01205 Uncharacterized protein family UPF0029 E4N86_03065 PF09186 Domain of unknown function (DUF1949) E4N86_03095 PF03477 ATP cone domain E4N86_03105 PF01145 SPFH domain / Band 7 family E4N86_03110 PF01145 SPFH domain / Band 7 family E4N86_03120 PF03062 MBOAT, membrane-bound O-acyltransferase family E4N86_03130 PF00206 Lyase E4N86_03130 PF10415 Fumarase C C-terminus E4N86_03135 PF13488 Glycine zipper E4N86_03135 PF00691 OmpA family E4N86_03145 PF06733 DEAD_2 E4N86_03145 PF13307 Helicase C-terminal domain E4N86_03165 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N86_03165 PF00672 HAMP domain E4N86_03170 PF04773 FecR protein E4N86_03200 PF08544 GHMP kinases C terminal E4N86_03200 PF00288 GHMP kinases N terminal domain E4N86_03205 PF04026 SpoVG E4N86_03215 PF01386 Ribosomal L25p family E4N86_03215 PF14693 Ribosomal protein TL5, C-terminal domain E4N86_03220 PF01171 PP-loop family E4N86_03230 PF17820 PDZ domain E4N86_03230 PF13180 PDZ domain E4N86_03235 PF03033 Glycosyltransferase family 28 N-terminal domain E4N86_03235 PF04101 Glycosyltransferase family 28 C-terminal domain E4N86_03240 PF02674 Colicin V production protein E4N86_03245 PF09115 DNA polymerase III, delta subunit, C terminal E4N86_03250 PF00989 PAS fold E4N86_03250 PF00512 His Kinase A (phospho-acceptor) domain E4N86_03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N86_03255 PF00158 Sigma-54 interaction domain E4N86_03255 PF02954 Bacterial regulatory protein, Fis family E4N86_03255 PF00072 Response regulator receiver domain E4N86_03260 PF01728 FtsJ-like methyltransferase E4N86_03270 PF13180 PDZ domain E4N86_03270 PF17820 PDZ domain E4N86_03275 PF00999 Sodium/hydrogen exchanger family E4N86_03280 PF02690 Na+/Pi-cotransporter E4N86_03285 PF03144 Elongation factor Tu domain 2 E4N86_03285 PF09105 Elongation factor SelB, winged helix E4N86_03285 PF09107 Elongation factor SelB, winged helix E4N86_03285 PF09106 Elongation factor SelB, winged helix E4N86_03285 PF00009 Elongation factor Tu GTP binding domain E4N86_03320 PF00753 Metallo-beta-lactamase superfamily E4N86_03320 PF12706 Beta-lactamase superfamily domain E4N86_03325 PF02608 ABC transporter substrate-binding protein PnrA-like E4N86_03330 PF00005 ABC transporter E4N86_03340 PF02653 Branched-chain amino acid transport system / permease component E4N86_03370 PF00163 Ribosomal protein S4/S9 N-terminal domain E4N86_03370 PF01479 S4 domain E4N86_03430 PF08264 Anticodon-binding domain of tRNA E4N86_03430 PF00133 tRNA synthetases class I (I, L, M and V) E4N86_03430 PF10458 Valyl tRNA synthetase tRNA binding arm E4N86_03435 PF08279 HTH domain E4N86_03435 PF13280 WYL domain E4N86_03445 PF00005 ABC transporter E4N86_03490 PF00005 ABC transporter E4N86_03495 PF08361 MAATS-type transcriptional repressor, C-terminal region E4N86_03495 PF00440 Bacterial regulatory proteins, tetR family E4N86_03500 PF00271 Helicase conserved C-terminal domain E4N86_03500 PF17757 UvrB interaction domain E4N86_03500 PF02151 UvrB/uvrC motif E4N86_03500 PF04851 Type III restriction enzyme, res subunit E4N86_03500 PF12344 Ultra-violet resistance protein B E4N86_03505 PF01256 Carbohydrate kinase E4N86_03505 PF03853 YjeF-related protein N-terminus E4N86_03510 PF00773 RNB domain E4N86_03545 PF01467 Cytidylyltransferase-like E4N86_03570 PF01991 ATP synthase (E/31 kDa) subunit E4N86_03575 PF01022 Bacterial regulatory protein, arsR family E4N86_03585 PF00403 Heavy-metal-associated domain E4N86_03590 PF00849 RNA pseudouridylate synthase E4N86_03590 PF01479 S4 domain E4N86_03605 PF13237 4Fe-4S dicluster domain E4N86_03605 PF13375 RnfC Barrel sandwich hybrid domain E4N86_03605 PF10531 SLBB domain E4N86_03605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4N86_03610 PF03116 NQR2, RnfD, RnfE family E4N86_03640 PF10609 NUBPL iron-transfer P-loop NTPase E4N86_03650 PF01790 Prolipoprotein diacylglyceryl transferase E4N86_03655 PF02540 NAD synthase E4N86_03665 PF16326 ABC transporter C-terminal domain E4N86_03665 PF00005 ABC transporter E4N86_03665 PF12848 ABC transporter E4N86_03670 PF08239 Bacterial SH3 domain E4N86_03685 PF01966 HD domain E4N86_03710 PF00999 Sodium/hydrogen exchanger family E4N86_03760 PF00005 ABC transporter E4N86_03760 PF14524 Wzt C-terminal domain E4N86_03765 PF08485 Polysaccharide biosynthesis protein C-terminal E4N86_03765 PF02719 Polysaccharide biosynthesis protein E4N86_03770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4N86_03775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4N86_03780 PF00535 Glycosyl transferase family 2 E4N86_03790 PF03193 RsgA GTPase E4N86_03790 PF16745 RsgA N-terminal domain E4N86_03815 PF00535 Glycosyl transferase family 2 E4N86_03825 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E4N86_03825 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E4N86_03825 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E4N86_03830 PF00535 Glycosyl transferase family 2 E4N86_03840 PF05523 WxcM-like, C-terminal E4N86_03860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4N86_03885 PF01501 Glycosyl transferase family 8 E4N86_03885 PF00535 Glycosyl transferase family 2 E4N86_03890 PF00535 Glycosyl transferase family 2 E4N86_03895 PF00535 Glycosyl transferase family 2 E4N86_03900 PF00534 Glycosyl transferases group 1 E4N86_03900 PF13439 Glycosyltransferase Family 4 E4N86_03910 PF00535 Glycosyl transferase family 2 E4N86_03915 PF02096 60Kd inner membrane protein E4N86_03920 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E4N86_03925 PF02096 60Kd inner membrane protein E4N86_03925 PF14849 YidC periplasmic domain E4N86_03930 PF00535 Glycosyl transferase family 2 E4N86_03935 PF02397 Bacterial sugar transferase E4N86_03940 PF13439 Glycosyltransferase Family 4 E4N86_03940 PF00534 Glycosyl transferases group 1 E4N86_03945 PF00483 Nucleotidyl transferase E4N86_03950 PF16363 GDP-mannose 4,6 dehydratase E4N86_03955 PF13393 Histidyl-tRNA synthetase E4N86_03960 PF00588 SpoU rRNA Methylase family E4N86_03960 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4N86_03965 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E4N86_03965 PF10996 Beta-Casp domain E4N86_03965 PF00753 Metallo-beta-lactamase superfamily E4N86_03985 PF01177 Asp/Glu/Hydantoin racemase E4N86_03990 PF03193 RsgA GTPase E4N86_03995 PF00488 MutS domain V E4N86_03995 PF01713 Smr domain E4N86_04005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E4N86_04020 PF00072 Response regulator receiver domain E4N86_04020 PF00486 Transcriptional regulatory protein, C terminal E4N86_04025 PF00512 His Kinase A (phospho-acceptor) domain E4N86_04025 PF00672 HAMP domain E4N86_04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N86_04035 PF00005 ABC transporter E4N86_04050 PF01973 Protein of unknown function DUF115 E4N86_04070 PF01300 Telomere recombination E4N86_04080 PF01668 SmpB protein E4N86_04085 PF10502 Signal peptidase, peptidase S26 E4N86_04090 PF04055 Radical SAM superfamily E4N86_04090 PF06969 HemN C-terminal domain E4N86_04095 PF00072 Response regulator receiver domain E4N86_04105 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E4N86_04120 PF02465 Flagellar hook-associated protein 2 N-terminus E4N86_04120 PF07195 Flagellar hook-associated protein 2 C-terminus E4N86_04130 PF00669 Bacterial flagellin N-terminal helical region E4N86_04130 PF00700 Bacterial flagellin C-terminal helical region E4N86_04135 PF00700 Bacterial flagellin C-terminal helical region E4N86_04135 PF00669 Bacterial flagellin N-terminal helical region E4N86_04160 PF00557 Metallopeptidase family M24 E4N86_04160 PF01321 Creatinase/Prolidase N-terminal domain E4N86_04170 PF01709 Transcriptional regulator E4N86_04175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E4N86_04175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E4N86_04190 PF01584 CheW-like domain E4N86_04190 PF07194 P2 response regulator binding domain E4N86_04190 PF02895 Signal transducing histidine kinase, homodimeric domain E4N86_04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N86_04190 PF01627 Hpt domain E4N86_04195 PF01584 CheW-like domain E4N86_04205 PF00072 Response regulator receiver domain E4N86_04215 PF06470 SMC proteins Flexible Hinge Domain E4N86_04215 PF02463 RecF/RecN/SMC N terminal domain E4N86_04225 PF13525 Outer membrane lipoprotein E4N86_04235 PF10397 Adenylosuccinate lyase C-terminus E4N86_04235 PF00206 Lyase E4N86_04245 PF00391 PEP-utilising enzyme, mobile domain E4N86_04245 PF02896 PEP-utilising enzyme, TIM barrel domain E4N86_04245 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4N86_04260 PF07497 Rho termination factor, RNA-binding domain E4N86_04260 PF07498 Rho termination factor, N-terminal domain E4N86_04260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4N86_04265 PF01197 Ribosomal protein L31 E4N86_04275 PF03313 Serine dehydratase alpha chain E4N86_04280 PF03315 Serine dehydratase beta chain E4N86_04280 PF01842 ACT domain E4N86_04290 PF00005 ABC transporter E4N86_04295 PF03239 Iron permease FTR1 family E4N86_04300 PF10634 Fe2+ transport protein E4N86_04315 PF12704 MacB-like periplasmic core domain E4N86_04315 PF02687 FtsX-like permease family E4N86_04320 PF00005 ABC transporter E4N86_04340 PF05681 Fumarate hydratase (Fumerase) E4N86_04345 PF05681 Fumarate hydratase (Fumerase) E4N86_04345 PF05683 Fumarase C-terminus E4N86_04350 PF08218 Citrate lyase ligase C-terminal domain E4N86_04355 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E4N86_04375 PF13277 YmdB-like protein E4N86_04385 PF00348 Polyprenyl synthetase E4N86_04390 PF00533 BRCA1 C Terminus (BRCT) domain E4N86_04390 PF01653 NAD-dependent DNA ligase adenylation domain E4N86_04390 PF03120 NAD-dependent DNA ligase OB-fold domain E4N86_04410 PF03692 Putative zinc- or iron-chelating domain E4N86_04425 PF02618 YceG-like family E4N86_04445 PF01351 Ribonuclease HII E4N86_04450 PF02575 YbaB/EbfC DNA-binding family E4N86_04455 PF13662 Toprim domain E4N86_04455 PF02132 RecR protein E4N86_04460 PF00365 Phosphofructokinase E4N86_04465 PF03099 Biotin/lipoate A/B protein ligase family E4N86_04465 PF10437 Bacterial lipoate protein ligase C-terminus E4N86_04515 PF04055 Radical SAM superfamily E4N86_04520 PF00919 Uncharacterized protein family UPF0004 E4N86_04520 PF01938 TRAM domain E4N86_04520 PF04055 Radical SAM superfamily E4N86_04555 PF08323 Starch synthase catalytic domain E4N86_04555 PF00534 Glycosyl transferases group 1 E4N86_04575 PF02938 GAD domain E4N86_04575 PF00152 tRNA synthetases class II (D, K and N) E4N86_04575 PF01336 OB-fold nucleic acid binding domain E4N86_04580 PF00579 tRNA synthetases class I (W and Y) E4N86_04585 PF01584 CheW-like domain E4N86_04595 PF01513 ATP-NAD kinase E4N86_04600 PF00005 ABC transporter E4N86_04600 PF12848 ABC transporter E4N86_04605 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E4N86_04605 PF00037 4Fe-4S binding domain E4N86_04605 PF02256 Iron hydrogenase small subunit E4N86_04605 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4N86_04610 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_04610 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4N86_04615 PF01888 CbiD E4N86_04620 PF00005 ABC transporter E4N86_04635 PF08361 MAATS-type transcriptional repressor, C-terminal region E4N86_04635 PF00440 Bacterial regulatory proteins, tetR family E4N86_04640 PF13676 TIR domain E4N86_04690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E4N86_04690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E4N86_04720 PF02347 Glycine cleavage system P-protein E4N86_04725 PF02347 Glycine cleavage system P-protein E4N86_04730 PF01597 Glycine cleavage H-protein E4N86_04735 PF01571 Aminomethyltransferase folate-binding domain E4N86_04735 PF08669 Glycine cleavage T-protein C-terminal barrel domain E4N86_04745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4N86_04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_04750 PF18273 Type III R-M EcoP15I C-terminal domain E4N86_04750 PF01555 DNA methylase E4N86_04755 PF08774 VRR-NUC domain E4N86_04755 PF04851 Type III restriction enzyme, res subunit E4N86_04765 PF04223 Citrate lyase, alpha subunit (CitF) E4N86_04770 PF03328 HpcH/HpaI aldolase/citrate lyase family E4N86_04775 PF06857 Malonate decarboxylase delta subunit (MdcD) E4N86_04795 PF01612 3'-5' exonuclease E4N86_04795 PF00476 DNA polymerase family A E4N86_04795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E4N86_04795 PF01367 5'-3' exonuclease, C-terminal SAM fold E4N86_04800 PF01121 Dephospho-CoA kinase E4N86_04810 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E4N86_04810 PF01488 Shikimate / quinate 5-dehydrogenase E4N86_04810 PF08501 Shikimate dehydrogenase substrate binding domain E4N86_04815 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) E4N86_04825 PF03793 PASTA domain E4N86_04830 PF00551 Formyl transferase E4N86_04830 PF02911 Formyl transferase, C-terminal domain E4N86_04835 PF01327 Polypeptide deformylase E4N86_04855 PF00005 ABC transporter E4N86_04860 PF02632 BioY family E4N86_04865 PF00664 ABC transporter transmembrane region E4N86_04865 PF00005 ABC transporter E4N86_04870 PF00664 ABC transporter transmembrane region E4N86_04870 PF00005 ABC transporter E4N86_04875 PF09820 Predicted AAA-ATPase E4N86_04875 PF08011 PD-(D/E)XK nuclease superfamily E4N86_04880 PF00270 DEAD/DEAH box helicase E4N86_04880 PF04408 Helicase associated domain (HA2) E4N86_04880 PF00271 Helicase conserved C-terminal domain E4N86_04880 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold E4N86_04895 PF01029 NusB family E4N86_04900 PF13145 PPIC-type PPIASE domain E4N86_04905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4N86_04905 PF01411 tRNA synthetases class II (A) E4N86_04910 PF03796 DnaB-like helicase C terminal domain E4N86_04910 PF00772 DnaB-like helicase N terminal domain E4N86_04930 PF01008 Initiation factor 2 subunit family E4N86_04945 PF05698 Bacterial trigger factor protein (TF) C-terminus E4N86_04945 PF05697 Bacterial trigger factor protein (TF) E4N86_04945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4N86_04950 PF00574 Clp protease E4N86_04955 PF07724 AAA domain (Cdc48 subfamily) E4N86_04955 PF10431 C-terminal, D2-small domain, of ClpB protein E4N86_04955 PF06689 ClpX C4-type zinc finger E4N86_04965 PF03948 Ribosomal protein L9, C-terminal domain E4N86_04965 PF01281 Ribosomal protein L9, N-terminal domain E4N86_04970 PF01084 Ribosomal protein S18 E4N86_04975 PF00436 Single-strand binding protein family E4N86_04980 PF01250 Ribosomal protein S6 E4N86_04995 PF01813 ATP synthase subunit D E4N86_05000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4N86_05000 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4N86_05005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4N86_05005 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4N86_05005 PF16886 ATPsynthase alpha/beta subunit N-term extension E4N86_05010 PF00156 Phosphoribosyl transferase domain E4N86_05015 PF00360 Phytochrome region E4N86_05015 PF01590 GAF domain E4N86_05015 PF00563 EAL domain E4N86_05015 PF00990 Diguanylate cyclase, GGDEF domain E4N86_05020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4N86_05035 PF00005 ABC transporter E4N86_05060 PF07171 MlrC C-terminus E4N86_05060 PF07364 Metallopeptidase family M81 E4N86_05065 PF00300 Histidine phosphatase superfamily (branch 1) E4N86_05100 PF00994 Probable molybdopterin binding domain E4N86_05100 PF18146 Damage-inducible protein CinA KH domain E4N86_05100 PF02464 Competence-damaged protein E4N86_05110 PF00795 Carbon-nitrogen hydrolase E4N86_05115 PF00216 Bacterial DNA-binding protein E4N86_05120 PF01649 Ribosomal protein S20 E4N86_05130 PF04620 Flagellar filament outer layer protein Flaa E4N86_05140 PF01520 N-acetylmuramoyl-L-alanine amidase E4N86_05145 PF00162 Phosphoglycerate kinase E4N86_05155 PF01979 Amidohydrolase family E4N86_05160 PF00958 GMP synthase C terminal domain E4N86_05160 PF00117 Glutamine amidotransferase class-I E4N86_05160 PF01171 PP-loop family E4N86_05175 PF12626 Polymerase A arginine-rich C-terminus E4N86_05175 PF12627 Probable RNA and SrmB- binding site of polymerase A E4N86_05175 PF01743 Poly A polymerase head domain E4N86_05195 PF00970 Oxidoreductase FAD-binding domain E4N86_05195 PF00175 Oxidoreductase NAD-binding domain E4N86_05195 PF00042 Globin E4N86_05200 PF01593 Flavin containing amine oxidoreductase E4N86_05215 PF00226 DnaJ domain E4N86_05215 PF01556 DnaJ C terminal domain E4N86_05215 PF00684 DnaJ central domain E4N86_05220 PF00557 Metallopeptidase family M24 E4N86_05225 PF03372 Endonuclease/Exonuclease/phosphatase family E4N86_05235 PF00037 4Fe-4S binding domain E4N86_05245 PF01551 Peptidase family M23 E4N86_05245 PF04225 Opacity-associated protein A LysM-like domain E4N86_05255 PF00912 Transglycosylase E4N86_05255 PF00905 Penicillin binding protein transpeptidase domain E4N86_05255 PF17092 Penicillin-binding protein OB-like domain E4N86_05265 PF00501 AMP-binding enzyme E4N86_05275 PF02417 Chromate transporter E4N86_05280 PF02417 Chromate transporter E4N86_05295 PF01467 Cytidylyltransferase-like E4N86_05300 PF01926 50S ribosome-binding GTPase E4N86_05300 PF01018 GTP1/OBG E4N86_05305 PF01016 Ribosomal L27 protein E4N86_05315 PF00829 Ribosomal prokaryotic L21 protein E4N86_05320 PF16363 GDP-mannose 4,6 dehydratase E4N86_05325 PF01880 Desulfoferrodoxin E4N86_05325 PF06397 Desulfoferrodoxin, N-terminal domain E4N86_05355 PF01966 HD domain E4N86_05370 PF01209 ubiE/COQ5 methyltransferase family E4N86_05405 PF03412 Peptidase C39 family E4N86_05405 PF00005 ABC transporter E4N86_05405 PF00664 ABC transporter transmembrane region E4N86_05410 PF03412 Peptidase C39 family E4N86_05410 PF00005 ABC transporter E4N86_05410 PF00664 ABC transporter transmembrane region E4N86_05505 PF17676 LD-carboxypeptidase C-terminal domain E4N86_05505 PF02016 LD-carboxypeptidase N-terminal domain E4N86_05510 PF00589 Phage integrase family E4N86_05510 PF13495 Phage integrase, N-terminal SAM-like domain E4N86_05540 PF00005 ABC transporter E4N86_05540 PF02687 FtsX-like permease family E4N86_05540 PF12704 MacB-like periplasmic core domain E4N86_05545 PF00005 ABC transporter E4N86_05550 PF01381 Helix-turn-helix E4N86_05555 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB E4N86_05570 PF00232 Glycosyl hydrolase family 1 E4N86_05575 PF05973 Phage derived protein Gp49-like (DUF891) E4N86_05595 PF04055 Radical SAM superfamily E4N86_05595 PF00919 Uncharacterized protein family UPF0004 E4N86_05610 PF05525 Branched-chain amino acid transport protein E4N86_05620 PF00679 Elongation factor G C-terminus E4N86_05620 PF14492 Elongation Factor G, domain II E4N86_05620 PF00009 Elongation factor Tu GTP binding domain E4N86_05620 PF03144 Elongation factor Tu domain 2 E4N86_05620 PF06421 GTP-binding protein LepA C-terminus E4N86_05625 PF04060 Putative Fe-S cluster E4N86_05630 PF07650 KH domain E4N86_05630 PF01926 50S ribosome-binding GTPase E4N86_05635 PF01808 AICARFT/IMPCHase bienzyme E4N86_05635 PF02142 MGS-like domain E4N86_05640 PF00551 Formyl transferase E4N86_05645 PF02810 SEC-C motif E4N86_05645 PF07517 SecA DEAD-like domain E4N86_05645 PF01043 SecA preprotein cross-linking domain E4N86_05645 PF07516 SecA Wing and Scaffold domain E4N86_05665 PF01648 4'-phosphopantetheinyl transferase superfamily E4N86_05675 PF02457 DisA bacterial checkpoint controller nucleotide-binding E4N86_05680 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E4N86_05680 PF02779 Transketolase, pyrimidine binding domain E4N86_05680 PF02780 Transketolase, C-terminal domain E4N86_05685 PF02629 CoA binding domain E4N86_05685 PF06971 Putative DNA-binding protein N-terminus E4N86_05690 PF10672 S-adenosylmethionine-dependent methyltransferase E4N86_05695 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4N86_05695 PF17864 RuvB AAA lid domain E4N86_05695 PF05491 RuvB C-terminal winged helix domain E4N86_05700 PF00465 Iron-containing alcohol dehydrogenase E4N86_05705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4N86_05705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4N86_05720 PF13186 Iron-sulfur cluster-binding domain E4N86_05740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4N86_05755 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E4N86_05755 PF03484 tRNA synthetase B5 domain E4N86_05770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E4N86_05785 PF00860 Permease family E4N86_05810 PF01098 Cell cycle protein E4N86_05815 PF03717 Penicillin-binding Protein dimerisation domain E4N86_05815 PF00905 Penicillin binding protein transpeptidase domain E4N86_05850 PF03979 Sigma-70 factor, region 1.1 E4N86_05850 PF00140 Sigma-70 factor, region 1.2 E4N86_05850 PF04542 Sigma-70 region 2 E4N86_05850 PF04539 Sigma-70 region 3 E4N86_05850 PF04545 Sigma-70, region 4 E4N86_05855 PF08275 DNA primase catalytic core, N-terminal domain E4N86_05855 PF01807 CHC2 zinc finger E4N86_05905 PF01330 RuvA N terminal domain E4N86_05910 PF02075 Crossover junction endodeoxyribonuclease RuvC E4N86_05915 PF05193 Peptidase M16 inactive domain E4N86_05915 PF08367 Peptidase M16C associated E4N86_05915 PF00675 Insulinase (Peptidase family M16) E4N86_05920 PF00664 ABC transporter transmembrane region E4N86_05920 PF00005 ABC transporter E4N86_05920 PF03412 Peptidase C39 family E4N86_05970 PF02517 CPBP intramembrane metalloprotease E4N86_05975 PF02517 CPBP intramembrane metalloprotease E4N86_05980 PF02517 CPBP intramembrane metalloprotease E4N86_05995 PF04452 RNA methyltransferase E4N86_06000 PF13180 PDZ domain E4N86_06000 PF03572 Peptidase family S41 E4N86_06010 PF00005 ABC transporter E4N86_06010 PF12848 ABC transporter E4N86_06015 PF02779 Transketolase, pyrimidine binding domain E4N86_06015 PF00456 Transketolase, thiamine diphosphate binding domain E4N86_06050 PF02463 RecF/RecN/SMC N terminal domain E4N86_06070 PF00877 NlpC/P60 family E4N86_06070 PF01476 LysM domain E4N86_06080 PF07475 HPr Serine kinase C-terminal domain E4N86_06080 PF02603 HPr Serine kinase N terminus E4N86_06085 PF00381 PTS HPr component phosphorylation site E4N86_06090 PF01523 Putative modulator of DNA gyrase E4N86_06095 PF01523 Putative modulator of DNA gyrase E4N86_06150 PF17757 UvrB interaction domain E4N86_06150 PF03461 TRCF domain E4N86_06150 PF00271 Helicase conserved C-terminal domain E4N86_06150 PF00270 DEAD/DEAH box helicase E4N86_06150 PF02559 CarD-like/TRCF domain E4N86_06160 PF01706 FliG C-terminal domain E4N86_06160 PF14841 FliG middle domain E4N86_06160 PF14842 FliG N-terminal domain E4N86_06165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_06165 PF00672 HAMP domain E4N86_06165 PF02743 Cache domain E4N86_06175 PF00455 DeoR C terminal sensor domain E4N86_06175 PF08220 DeoR-like helix-turn-helix domain E4N86_06180 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E4N86_06185 PF08666 SAF domain E4N86_06190 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E4N86_06195 PF07005 Sugar-binding N-terminal domain E4N86_06195 PF17042 Nucleotide-binding C-terminal domain E4N86_06200 PF03812 2-keto-3-deoxygluconate permease E4N86_06245 PF00586 AIR synthase related protein, N-terminal domain E4N86_06245 PF02769 AIR synthase related protein, C-terminal domain E4N86_06245 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E4N86_06250 PF04260 Protein of unknown function (DUF436) E4N86_06260 PF12838 4Fe-4S dicluster domain E4N86_06260 PF02906 Iron only hydrogenase large subunit, C-terminal domain E4N86_06260 PF02256 Iron hydrogenase small subunit E4N86_06265 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_06270 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_06270 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_06280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_06280 PF00005 ABC transporter E4N86_06285 PF00005 ABC transporter E4N86_06285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_06300 PF02086 D12 class N6 adenine-specific DNA methyltransferase E4N86_06305 PF04556 DpnII restriction endonuclease E4N86_06310 PF01555 DNA methylase E4N86_06320 PF02844 Phosphoribosylglycinamide synthetase, N domain E4N86_06320 PF02843 Phosphoribosylglycinamide synthetase, C domain E4N86_06320 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E4N86_06325 PF00586 AIR synthase related protein, N-terminal domain E4N86_06325 PF02769 AIR synthase related protein, C-terminal domain E4N86_06330 PF04551 GcpE protein E4N86_06345 PF02028 BCCT, betaine/carnitine/choline family transporter E4N86_06350 PF12804 MobA-like NTP transferase domain E4N86_06355 PF01235 Sodium:alanine symporter family E4N86_06380 PF01713 Smr domain E4N86_06380 PF00488 MutS domain V E4N86_06400 PF00092 von Willebrand factor type A domain E4N86_06410 PF01882 Protein of unknown function DUF58 E4N86_06425 PF03471 Transporter associated domain E4N86_06425 PF00571 CBS domain E4N86_06430 PF02130 Uncharacterized protein family UPF0054 E4N86_06435 PF07698 7TM receptor with intracellular HD hydrolase E4N86_06435 PF07697 7TM-HD extracellular E4N86_06435 PF01966 HD domain E4N86_06440 PF02562 PhoH-like protein E4N86_06455 PF00121 Triosephosphate isomerase E4N86_06465 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_06480 PF00753 Metallo-beta-lactamase superfamily E4N86_06490 PF10282 Lactonase, 7-bladed beta-propeller E4N86_06495 PF00933 Glycosyl hydrolase family 3 N terminal domain E4N86_06495 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4N86_06510 PF02874 ATP synthase alpha/beta family, beta-barrel domain E4N86_06510 PF18269 T3SS EscN ATPase C-terminal domain E4N86_06510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E4N86_06515 PF02108 Flagellar assembly protein FliH E4N86_06520 PF01706 FliG C-terminal domain E4N86_06520 PF14841 FliG middle domain E4N86_06520 PF14842 FliG N-terminal domain E4N86_06525 PF01514 Secretory protein of YscJ/FliF family E4N86_06525 PF08345 Flagellar M-ring protein C-terminal E4N86_06530 PF02049 Flagellar hook-basal body complex protein FliE E4N86_06535 PF00460 Flagella basal body rod protein E4N86_06535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N86_06540 PF00460 Flagella basal body rod protein E4N86_06545 PF00004 ATPase family associated with various cellular activities (AAA) E4N86_06545 PF07724 AAA domain (Cdc48 subfamily) E4N86_06550 PF00227 Proteasome subunit E4N86_06555 PF02899 Phage integrase, N-terminal SAM-like domain E4N86_06555 PF00589 Phage integrase family E4N86_06560 PF01131 DNA topoisomerase E4N86_06560 PF01751 Toprim domain E4N86_06560 PF01396 Topoisomerase DNA binding C4 zinc finger E4N86_06565 PF02481 DNA recombination-mediator protein A E4N86_06565 PF17782 DprA winged helix domain E4N86_06575 PF02899 Phage integrase, N-terminal SAM-like domain E4N86_06575 PF00589 Phage integrase family E4N86_06580 PF12327 FtsZ family, C-terminal domain E4N86_06580 PF00091 Tubulin/FtsZ family, GTPase domain E4N86_06585 PF02491 SHS2 domain inserted in FTSA E4N86_06595 PF01098 Cell cycle protein E4N86_06600 PF01225 Mur ligase family, catalytic domain E4N86_06600 PF08245 Mur ligase middle domain E4N86_06600 PF02875 Mur ligase family, glutamate ligase domain E4N86_06610 PF01795 MraW methylase family E4N86_06615 PF02381 MraZ protein, putative antitoxin-like E4N86_06620 PF00326 Prolyl oligopeptidase family E4N86_06620 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4N86_06655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E4N86_06655 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E4N86_06655 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch E4N86_06665 PF02233 NAD(P) transhydrogenase beta subunit E4N86_06700 PF00005 ABC transporter E4N86_06710 PF01497 Periplasmic binding protein E4N86_06715 PF01047 MarR family E4N86_06720 PF00891 O-methyltransferase domain E4N86_06730 PF01032 FecCD transport family E4N86_06735 PF00005 ABC transporter E4N86_06745 PF06969 HemN C-terminal domain E4N86_06745 PF04055 Radical SAM superfamily E4N86_06750 PF00118 TCP-1/cpn60 chaperonin family E4N86_06765 PF01264 Chorismate synthase E4N86_06770 PF02390 Putative methyltransferase E4N86_06810 PF01740 STAS domain E4N86_06830 PF01212 Beta-eliminating lyase E4N86_06845 PF16925 Tetracyclin repressor-like, C-terminal domain E4N86_06845 PF00440 Bacterial regulatory proteins, tetR family E4N86_06855 PF05191 Adenylate kinase, active site lid E4N86_06870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E4N86_06870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E4N86_06875 PF02576 RimP N-terminal domain E4N86_06875 PF17384 RimP C-terminal SH3 domain E4N86_06880 PF13184 NusA-like KH domain E4N86_06880 PF08529 NusA N-terminal domain E4N86_06880 PF00575 S1 RNA binding domain E4N86_06885 PF11987 Translation-initiation factor 2 E4N86_06885 PF00009 Elongation factor Tu GTP binding domain E4N86_06885 PF04760 Translation initiation factor IF-2, N-terminal region E4N86_06890 PF02033 Ribosome-binding factor A E4N86_06895 PF01509 TruB family pseudouridylate synthase (N terminal domain) E4N86_06910 PF00005 ABC transporter E4N86_06915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_06915 PF00005 ABC transporter E4N86_06920 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_06920 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_06925 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_06930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_06935 PF02311 AraC-like ligand binding domain E4N86_06935 PF12833 Helix-turn-helix domain E4N86_06970 PF02401 LytB protein E4N86_06975 PF01168 Alanine racemase, N-terminal domain E4N86_06975 PF00842 Alanine racemase, C-terminal domain E4N86_06995 PF00326 Prolyl oligopeptidase family E4N86_06995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain E4N86_07000 PF02743 Cache domain E4N86_07000 PF00672 HAMP domain E4N86_07000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_07005 PF06832 Penicillin-Binding Protein C-terminus Family E4N86_07005 PF00912 Transglycosylase E4N86_07005 PF00905 Penicillin binding protein transpeptidase domain E4N86_07010 PF03313 Serine dehydratase alpha chain E4N86_07015 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_07035 PF01476 LysM domain E4N86_07035 PF01464 Transglycosylase SLT domain E4N86_07045 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E4N86_07050 PF05164 Cell division protein ZapA E4N86_07060 PF00453 Ribosomal protein L20 E4N86_07065 PF01632 Ribosomal protein L35 E4N86_07070 PF00707 Translation initiation factor IF-3, C-terminal domain E4N86_07070 PF05198 Translation initiation factor IF-3, N-terminal domain E4N86_07080 PF00005 ABC transporter E4N86_07090 PF13302 Acetyltransferase (GNAT) domain E4N86_07095 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E4N86_07095 PF01189 16S rRNA methyltransferase RsmB/F E4N86_07095 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E4N86_07100 PF04298 Putative neutral zinc metallopeptidase E4N86_07110 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4N86_07120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4N86_07120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region E4N86_07120 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_07125 PF04563 RNA polymerase beta subunit E4N86_07125 PF00562 RNA polymerase Rpb2, domain 6 E4N86_07125 PF10385 RNA polymerase beta subunit external 1 domain E4N86_07125 PF04561 RNA polymerase Rpb2, domain 2 E4N86_07125 PF04560 RNA polymerase Rpb2, domain 7 E4N86_07125 PF04565 RNA polymerase Rpb2, domain 3 E4N86_07145 PF00654 Voltage gated chloride channel E4N86_07150 PF01926 50S ribosome-binding GTPase E4N86_07150 PF12631 MnmE helical domain E4N86_07150 PF10396 GTP-binding protein TrmE N-terminus E4N86_07155 PF01569 PAP2 superfamily E4N86_07165 PF14353 CpXC protein E4N86_07180 PF00501 AMP-binding enzyme E4N86_07190 PF01551 Peptidase family M23 E4N86_07190 PF01476 LysM domain E4N86_07190 PF08525 Opacity-associated protein A N-terminal motif E4N86_07195 PF01368 DHH family E4N86_07195 PF02272 DHHA1 domain E4N86_07195 PF17768 RecJ OB domain E4N86_07195 PF10141 Single-strand DNA-specific exonuclease, C terminal domain E4N86_07200 PF02885 Glycosyl transferase family, helical bundle domain E4N86_07200 PF00591 Glycosyl transferase family, a/b domain E4N86_07200 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E4N86_07205 PF14821 Threonine synthase N terminus E4N86_07205 PF00291 Pyridoxal-phosphate dependent enzyme E4N86_07215 PF00155 Aminotransferase class I and II E4N86_07220 PF01479 S4 domain E4N86_07220 PF00849 RNA pseudouridylate synthase E4N86_07230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4N86_07230 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4N86_07230 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4N86_07230 PF10371 Domain of unknown function E4N86_07230 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4N86_07235 PF01177 Asp/Glu/Hydantoin racemase E4N86_07240 PF01053 Cys/Met metabolism PLP-dependent enzyme E4N86_07250 PF00664 ABC transporter transmembrane region E4N86_07250 PF00005 ABC transporter E4N86_07260 PF13726 Na+-H+ antiporter family E4N86_07260 PF03553 Na+/H+ antiporter family E4N86_07265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4N86_07265 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_07280 PF01784 NIF3 (NGG1p interacting factor 3) E4N86_07300 PF10509 Galactokinase galactose-binding signature E4N86_07300 PF00288 GHMP kinases N terminal domain E4N86_07300 PF08544 GHMP kinases C terminal E4N86_07310 PF13847 Methyltransferase domain E4N86_07315 PF02653 Branched-chain amino acid transport system / permease component E4N86_07320 PF00005 ABC transporter E4N86_07325 PF18610 Periplasmic binding protein domain E4N86_07325 PF13407 Periplasmic binding protein domain E4N86_07335 PF10502 Signal peptidase, peptidase S26 E4N86_07340 PF03129 Anticodon binding domain E4N86_07340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N86_07340 PF04073 Aminoacyl-tRNA editing domain E4N86_07360 PF01297 Zinc-uptake complex component A periplasmic E4N86_07370 PF07687 Peptidase dimerisation domain E4N86_07370 PF01546 Peptidase family M20/M25/M40 E4N86_07390 PF00005 ABC transporter E4N86_07395 PF01032 FecCD transport family E4N86_07400 PF01497 Periplasmic binding protein E4N86_07405 PF07476 Methylaspartate ammonia-lyase C-terminus E4N86_07405 PF05034 Methylaspartate ammonia-lyase N-terminus E4N86_07410 PF06368 Methylaspartate mutase E chain (MutE) E4N86_07415 PF03932 CutC family E4N86_07425 PF00204 DNA gyrase B E4N86_07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N86_07425 PF00986 DNA gyrase B subunit, carboxyl terminus E4N86_07425 PF01751 Toprim domain E4N86_07430 PF00899 ThiF family E4N86_07435 PF00953 Glycosyl transferase family 4 E4N86_07445 PF00860 Permease family E4N86_07475 PF02872 5'-nucleotidase, C-terminal domain E4N86_07475 PF17936 Bacterial Ig domain E4N86_07475 PF00149 Calcineurin-like phosphoesterase E4N86_07480 PF01136 Peptidase family U32 E4N86_07480 PF16325 Peptidase family U32 C-terminal domain E4N86_07485 PF07859 alpha/beta hydrolase fold E4N86_07490 PF00664 ABC transporter transmembrane region E4N86_07490 PF00005 ABC transporter E4N86_07495 PF00152 tRNA synthetases class II (D, K and N) E4N86_07500 PF00005 ABC transporter E4N86_07500 PF02687 FtsX-like permease family E4N86_07500 PF12704 MacB-like periplasmic core domain E4N86_07515 PF03819 MazG nucleotide pyrophosphohydrolase domain E4N86_07520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase E4N86_07520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E4N86_07525 PF03129 Anticodon binding domain E4N86_07525 PF02824 TGS domain E4N86_07525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N86_07525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E4N86_07535 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E4N86_07535 PF02542 YgbB family E4N86_07540 PF02542 YgbB family E4N86_07555 PF00924 Mechanosensitive ion channel E4N86_07570 PF10509 Galactokinase galactose-binding signature E4N86_07570 PF08544 GHMP kinases C terminal E4N86_07575 PF00795 Carbon-nitrogen hydrolase E4N86_07580 PF00595 PDZ domain E4N86_07590 PF00072 Response regulator receiver domain E4N86_07595 PF02021 Uncharacterised protein family UPF0102 E4N86_07610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N86_07610 PF02403 Seryl-tRNA synthetase N-terminal domain E4N86_07630 PF01590 GAF domain E4N86_07630 PF00158 Sigma-54 interaction domain E4N86_07640 PF02743 Cache domain E4N86_07640 PF00672 HAMP domain E4N86_07640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_07645 PF01725 Ham1 family E4N86_07655 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) E4N86_07660 PF01416 tRNA pseudouridine synthase E4N86_07670 PF02146 Sir2 family E4N86_07675 PF08668 HDOD domain E4N86_07700 PF01168 Alanine racemase, N-terminal domain E4N86_07715 PF09820 Predicted AAA-ATPase E4N86_07715 PF08011 PD-(D/E)XK nuclease superfamily E4N86_07720 PF03006 Haemolysin-III related E4N86_07725 PF01551 Peptidase family M23 E4N86_07725 PF10145 Phage-related minor tail protein E4N86_07725 PF01464 Transglycosylase SLT domain E4N86_07750 PF00924 Mechanosensitive ion channel E4N86_07755 PF00196 Bacterial regulatory proteins, luxR family E4N86_07755 PF00072 Response regulator receiver domain E4N86_07765 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E4N86_07765 PF07685 CobB/CobQ-like glutamine amidotransferase domain E4N86_07770 PF00004 ATPase family associated with various cellular activities (AAA) E4N86_07770 PF07724 AAA domain (Cdc48 subfamily) E4N86_07770 PF17871 AAA lid domain E4N86_07770 PF02861 Clp amino terminal domain, pathogenicity island component E4N86_07770 PF10431 C-terminal, D2-small domain, of ClpB protein E4N86_07775 PF03806 AbgT putative transporter family E4N86_07800 PF02698 DUF218 domain E4N86_07810 PF13361 UvrD-like helicase C-terminal domain E4N86_07810 PF00580 UvrD/REP helicase N-terminal domain E4N86_07820 PF00133 tRNA synthetases class I (I, L, M and V) E4N86_07820 PF08264 Anticodon-binding domain of tRNA E4N86_07820 PF09334 tRNA synthetases class I (M) E4N86_07820 PF13603 Leucyl-tRNA synthetase, Domain 2 E4N86_07825 PF04205 FMN-binding domain E4N86_07830 PF17820 PDZ domain E4N86_07830 PF02163 Peptidase family M50 E4N86_07835 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E4N86_07835 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E4N86_07835 PF13288 DXP reductoisomerase C-terminal domain E4N86_07845 PF01255 Putative undecaprenyl diphosphate synthase E4N86_07850 PF01765 Ribosome recycling factor E4N86_07855 PF00889 Elongation factor TS E4N86_07860 PF00318 Ribosomal protein S2 E4N86_07870 PF02545 Maf-like protein E4N86_07890 PF07196 Flagellin hook IN motif E4N86_07890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E4N86_07895 PF00700 Bacterial flagellin C-terminal helical region E4N86_07895 PF07196 Flagellin hook IN motif E4N86_07895 PF00669 Bacterial flagellin N-terminal helical region E4N86_07900 PF02623 FliW protein E4N86_07905 PF02599 Global regulator protein family E4N86_07915 PF01032 FecCD transport family E4N86_07930 PF02733 Dak1 domain E4N86_07945 PF07969 Amidohydrolase family E4N86_07950 PF03553 Na+/H+ antiporter family E4N86_07960 PF04073 Aminoacyl-tRNA editing domain E4N86_07965 PF00578 AhpC/TSA family E4N86_07975 PF12801 4Fe-4S binding domain E4N86_07975 PF04205 FMN-binding domain E4N86_07980 PF08534 Redoxin E4N86_07985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4N86_07990 PF05175 Methyltransferase small domain E4N86_08005 PF00005 ABC transporter E4N86_08020 PF07730 Histidine kinase E4N86_08030 PF02654 Cobalamin-5-phosphate synthase E4N86_08040 PF01820 D-ala D-ala ligase N-terminus E4N86_08040 PF07478 D-ala D-ala ligase C-terminus E4N86_08050 PF02446 4-alpha-glucanotransferase E4N86_08055 PF00574 Clp protease E4N86_08060 PF03186 CobD/Cbib protein E4N86_08070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E4N86_08080 PF01424 R3H domain E4N86_08080 PF14804 Jag N-terminus E4N86_08085 PF02096 60Kd inner membrane protein E4N86_08085 PF14849 YidC periplasmic domain E4N86_08090 PF01809 Putative membrane protein insertion efficiency factor E4N86_08095 PF00825 Ribonuclease P E4N86_08100 PF00468 Ribosomal protein L34 E4N86_08115 PF01370 NAD dependent epimerase/dehydratase family E4N86_08125 PF00753 Metallo-beta-lactamase superfamily E4N86_08130 PF00309 Sigma-54 factor, Activator interacting domain (AID) E4N86_08130 PF04552 Sigma-54, DNA binding domain E4N86_08130 PF04963 Sigma-54 factor, core binding domain E4N86_08145 PF00156 Phosphoribosyl transferase domain E4N86_08145 PF13537 Glutamine amidotransferase domain E4N86_08180 PF01245 Ribosomal protein L19 E4N86_08185 PF01746 tRNA (Guanine-1)-methyltransferase E4N86_08190 PF01782 RimM N-terminal domain E4N86_08200 PF00886 Ribosomal protein S16 E4N86_08205 PF02277 Phosphoribosyltransferase E4N86_08210 PF00005 ABC transporter E4N86_08210 PF02687 FtsX-like permease family E4N86_08210 PF12704 MacB-like periplasmic core domain E4N86_08215 PF00005 ABC transporter E4N86_08220 PF00849 RNA pseudouridylate synthase E4N86_08220 PF01479 S4 domain E4N86_08225 PF04079 Segregation and condensation complex subunit ScpB E4N86_08230 PF02616 Segregation and condensation protein ScpA E4N86_08235 PF00154 recA bacterial DNA recombination protein E4N86_08245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E4N86_08245 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_08265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E4N86_08265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E4N86_08265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E4N86_08265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E4N86_08270 PF02308 MgtC family E4N86_08290 PF00579 tRNA synthetases class I (W and Y) E4N86_08295 PF01479 S4 domain E4N86_08295 PF00849 RNA pseudouridylate synthase E4N86_08315 PF00596 Class II Aldolase and Adducin N-terminal domain E4N86_08320 PF00072 Response regulator receiver domain E4N86_08320 PF00196 Bacterial regulatory proteins, luxR family E4N86_08325 PF02631 RecX family E4N86_08330 PF00380 Ribosomal protein S9/S16 E4N86_08335 PF00572 Ribosomal protein L13 E4N86_08345 PF02743 Cache domain E4N86_08345 PF00672 HAMP domain E4N86_08345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_08360 PF16314 Domain of unknown function (DUF4954) E4N86_08370 PF00391 PEP-utilising enzyme, mobile domain E4N86_08370 PF02896 PEP-utilising enzyme, TIM barrel domain E4N86_08385 PF13519 von Willebrand factor type A domain E4N86_08395 PF00581 Rhodanese-like domain E4N86_08395 PF17773 UPF0176 acylphosphatase like domain E4N86_08400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit E4N86_08400 PF13237 4Fe-4S dicluster domain E4N86_08400 PF13375 RnfC Barrel sandwich hybrid domain E4N86_08400 PF10531 SLBB domain E4N86_08405 PF03116 NQR2, RnfD, RnfE family E4N86_08410 PF04205 FMN-binding domain E4N86_08415 PF02508 Rnf-Nqr subunit, membrane protein E4N86_08420 PF02508 Rnf-Nqr subunit, membrane protein E4N86_08425 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_08450 PF00183 Hsp90 protein E4N86_08465 PF02203 Tar ligand binding domain homologue E4N86_08465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_08465 PF00672 HAMP domain E4N86_08475 PF00107 Zinc-binding dehydrogenase E4N86_08475 PF08240 Alcohol dehydrogenase GroES-like domain E4N86_08480 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4N86_08480 PF07683 Cobalamin synthesis protein cobW C-terminal domain E4N86_08485 PF05175 Methyltransferase small domain E4N86_08485 PF17827 PrmC N-terminal domain E4N86_08490 PF03462 PCRF domain E4N86_08490 PF00472 RF-1 domain E4N86_08495 PF02127 Aminopeptidase I zinc metalloprotease (M18) E4N86_08500 PF01134 Glucose inhibited division protein A E4N86_08500 PF13932 GidA associated domain E4N86_08505 PF01225 Mur ligase family, catalytic domain E4N86_08505 PF02875 Mur ligase family, glutamate ligase domain E4N86_08505 PF08245 Mur ligase middle domain E4N86_08510 PF07977 FabA-like domain E4N86_08515 PF00440 Bacterial regulatory proteins, tetR family E4N86_08515 PF08361 MAATS-type transcriptional repressor, C-terminal region E4N86_08525 PF00664 ABC transporter transmembrane region E4N86_08525 PF00005 ABC transporter E4N86_08530 PF04191 Phospholipid methyltransferase E4N86_08535 PF00005 ABC transporter E4N86_08535 PF00664 ABC transporter transmembrane region E4N86_08540 PF00005 ABC transporter E4N86_08540 PF00664 ABC transporter transmembrane region E4N86_08545 PF03412 Peptidase C39 family E4N86_08545 PF00005 ABC transporter E4N86_08545 PF00664 ABC transporter transmembrane region E4N86_08555 PF17202 Single cache domain 3 E4N86_08555 PF00672 HAMP domain E4N86_08555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_08570 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N86_08590 PF00072 Response regulator receiver domain E4N86_08600 PF00145 C-5 cytosine-specific DNA methylase E4N86_08605 PF03852 DNA mismatch endonuclease Vsr E4N86_08640 PF03009 Glycerophosphoryl diester phosphodiesterase family E4N86_08650 PF00708 Acylphosphatase E4N86_08675 PF01196 Ribosomal protein L17 E4N86_08680 PF01000 RNA polymerase Rpb3/RpoA insert domain E4N86_08680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E4N86_08680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E4N86_08685 PF00411 Ribosomal protein S11 E4N86_08690 PF00416 Ribosomal protein S13/S18 E4N86_08695 PF00444 Ribosomal protein L36 E4N86_08700 PF00344 SecY translocase E4N86_08705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E4N86_08710 PF00327 Ribosomal protein L30p/L7e E4N86_08715 PF00333 Ribosomal protein S5, N-terminal domain E4N86_08715 PF03719 Ribosomal protein S5, C-terminal domain E4N86_08720 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E4N86_08725 PF00347 Ribosomal protein L6 E4N86_08730 PF00410 Ribosomal protein S8 E4N86_08735 PF00253 Ribosomal protein S14p/S29e E4N86_08740 PF00673 ribosomal L5P family C-terminus E4N86_08740 PF00281 Ribosomal protein L5 E4N86_08745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E4N86_08745 PF00467 KOW motif E4N86_08750 PF00238 Ribosomal protein L14p/L23e E4N86_08755 PF00366 Ribosomal protein S17 E4N86_08760 PF00831 Ribosomal L29 protein E4N86_08765 PF00252 Ribosomal protein L16p/L10e E4N86_08770 PF07650 KH domain E4N86_08770 PF00189 Ribosomal protein S3, C-terminal domain E4N86_08775 PF00237 Ribosomal protein L22p/L17e E4N86_08780 PF00203 Ribosomal protein S19 E4N86_08785 PF00181 Ribosomal Proteins L2, RNA binding domain E4N86_08785 PF03947 Ribosomal Proteins L2, C-terminal domain E4N86_08790 PF00276 Ribosomal protein L23 E4N86_08795 PF00573 Ribosomal protein L4/L1 family E4N86_08800 PF00297 Ribosomal protein L3 E4N86_08805 PF00338 Ribosomal protein S10p/S20e E4N86_08810 PF00009 Elongation factor Tu GTP binding domain E4N86_08810 PF03143 Elongation factor Tu C-terminal domain E4N86_08810 PF03144 Elongation factor Tu domain 2 E4N86_08815 PF00082 Subtilase family E4N86_08815 PF05922 Peptidase inhibitor I9 E4N86_08835 PF01032 FecCD transport family E4N86_08840 PF00005 ABC transporter E4N86_08845 PF03553 Na+/H+ antiporter family E4N86_08865 PF17863 AAA lid domain E4N86_08865 PF01078 Magnesium chelatase, subunit ChlI E4N86_08870 PF17863 AAA lid domain E4N86_08870 PF01078 Magnesium chelatase, subunit ChlI E4N86_08870 PF13519 von Willebrand factor type A domain E4N86_08875 PF02514 CobN/Magnesium Chelatase E4N86_08885 PF01032 FecCD transport family E4N86_08890 PF00005 ABC transporter E4N86_08900 PF00085 Thioredoxin E4N86_08905 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_08935 PF00171 Aldehyde dehydrogenase family E4N86_08955 PF03450 CO dehydrogenase flavoprotein C-terminal domain E4N86_08955 PF00941 FAD binding domain in molybdopterin dehydrogenase E4N86_08960 PF01799 [2Fe-2S] binding domain E4N86_08960 PF00111 2Fe-2S iron-sulfur cluster binding domain E4N86_08970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E4N86_09025 PF02719 Polysaccharide biosynthesis protein E4N86_09045 PF01625 Peptide methionine sulfoxide reductase E4N86_09045 PF01641 SelR domain E4N86_09060 PF02086 D12 class N6 adenine-specific DNA methyltransferase E4N86_09065 PF01145 SPFH domain / Band 7 family E4N86_09070 PF01145 SPFH domain / Band 7 family E4N86_09105 PF00005 ABC transporter E4N86_09110 PF08543 Phosphomethylpyrimidine kinase E4N86_09125 PF01636 Phosphotransferase enzyme family E4N86_09135 PF00731 AIR carboxylase E4N86_09140 PF01259 SAICAR synthetase E4N86_09150 PF03390 2-hydroxycarboxylate transporter family E4N86_09170 PF00005 ABC transporter E4N86_09175 PF01458 Uncharacterized protein family (UPF0051) E4N86_09195 PF02190 ATP-dependent protease La (LON) substrate-binding domain E4N86_09195 PF05362 Lon protease (S16) C-terminal proteolytic domain E4N86_09195 PF00004 ATPase family associated with various cellular activities (AAA) E4N86_09225 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system E4N86_09240 PF01661 Macro domain E4N86_09250 PF02082 Transcriptional regulator E4N86_09255 PF01206 Sulfurtransferase TusA E4N86_09265 PF00266 Aminotransferase class-V E4N86_09270 PF02355 Protein export membrane protein E4N86_09275 PF02355 Protein export membrane protein E4N86_09280 PF02699 Preprotein translocase subunit E4N86_09285 PF00436 Single-strand binding protein family E4N86_09290 PF00106 short chain dehydrogenase E4N86_09320 PF00588 SpoU rRNA Methylase family E4N86_09320 PF08032 RNA 2'-O ribose methyltransferase substrate binding E4N86_09330 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_09345 PF13419 Haloacid dehalogenase-like hydrolase E4N86_09355 PF00571 CBS domain E4N86_09355 PF01769 Divalent cation transporter E4N86_09355 PF03448 MgtE intracellular N domain E4N86_09360 PF04452 RNA methyltransferase E4N86_09370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E4N86_09370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E4N86_09375 PF14572 Phosphoribosyl synthetase-associated domain E4N86_09375 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E4N86_09380 PF00990 Diguanylate cyclase, GGDEF domain E4N86_09380 PF00072 Response regulator receiver domain E4N86_09385 PF00990 Diguanylate cyclase, GGDEF domain E4N86_09390 PF03193 RsgA GTPase E4N86_09400 PF01026 TatD related DNase E4N86_09405 PF01207 Dihydrouridine synthase (Dus) E4N86_09410 PF06418 CTP synthase N-terminus E4N86_09410 PF00117 Glutamine amidotransferase class-I E4N86_09435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_09440 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_09445 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_09445 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_09450 PF00005 ABC transporter E4N86_09450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_09455 PF00005 ABC transporter E4N86_09455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_09460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E4N86_09460 PF10371 Domain of unknown function E4N86_09460 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E4N86_09460 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E4N86_09460 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E4N86_09465 PF00691 OmpA family E4N86_09485 PF08279 HTH domain E4N86_09485 PF13280 WYL domain E4N86_09495 PF04055 Radical SAM superfamily E4N86_09505 PF00005 ABC transporter E4N86_09510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N86_09515 PF00072 Response regulator receiver domain E4N86_09515 PF00486 Transcriptional regulatory protein, C terminal E4N86_09520 PF01546 Peptidase family M20/M25/M40 E4N86_09520 PF07687 Peptidase dimerisation domain E4N86_09535 PF03030 Inorganic H+ pyrophosphatase E4N86_09555 PF00072 Response regulator receiver domain E4N86_09555 PF01339 CheB methylesterase E4N86_09560 PF03705 CheR methyltransferase, all-alpha domain E4N86_09560 PF01739 CheR methyltransferase, SAM binding domain E4N86_09575 PF00005 ABC transporter E4N86_09575 PF12399 Branched-chain amino acid ATP-binding cassette transporter E4N86_09580 PF01195 Peptidyl-tRNA hydrolase E4N86_09590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E4N86_09595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_09595 PF02743 Cache domain E4N86_09595 PF00672 HAMP domain E4N86_09600 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_09605 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_09605 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_09610 PF00005 ABC transporter E4N86_09610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_09615 PF00005 ABC transporter E4N86_09615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_09625 PF01545 Cation efflux family E4N86_09625 PF16916 Dimerisation domain of Zinc Transporter E4N86_09650 PF00226 DnaJ domain E4N86_09650 PF01556 DnaJ C terminal domain E4N86_09650 PF00684 DnaJ central domain E4N86_09655 PF00012 Hsp70 protein E4N86_09660 PF01025 GrpE E4N86_09670 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_09685 PF00005 ABC transporter E4N86_09690 PF02571 Precorrin-6x reductase CbiJ/CobK E4N86_09695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4N86_09695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E4N86_09700 PF08011 PD-(D/E)XK nuclease superfamily E4N86_09700 PF09820 Predicted AAA-ATPase E4N86_09710 PF02687 FtsX-like permease family E4N86_09710 PF12704 MacB-like periplasmic core domain E4N86_09710 PF00005 ABC transporter E4N86_09715 PF02492 CobW/HypB/UreG, nucleotide-binding domain E4N86_09730 PF03063 Prismane/CO dehydrogenase family E4N86_09745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_09745 PF02743 Cache domain E4N86_09745 PF00672 HAMP domain E4N86_09760 PF00005 ABC transporter E4N86_09770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E4N86_09780 PF07804 HipA-like C-terminal domain E4N86_09790 PF01381 Helix-turn-helix E4N86_09845 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ E4N86_10015 PF00005 ABC transporter E4N86_10060 PF03781 Sulfatase-modifying factor enzyme 1 E4N86_10190 PF17762 HTH domain found in ParB protein E4N86_10190 PF02195 ParB-like nuclease domain E4N86_10195 PF13614 AAA domain E4N86_10200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4N86_10205 PF11760 Cobalamin synthesis G N-terminal E4N86_10205 PF01890 Cobalamin synthesis G C-terminus E4N86_10205 PF11761 Cobalamin biosynthesis central region E4N86_10215 PF01554 MatE E4N86_10220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4N86_10220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E4N86_10225 PF00698 Acyl transferase domain E4N86_10245 PF07055 Enoyl reductase FAD binding domain E4N86_10245 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E4N86_10245 PF12241 Trans-2-enoyl-CoA reductase catalytic region E4N86_10265 PF00364 Biotin-requiring enzyme E4N86_10270 PF00289 Biotin carboxylase, N-terminal domain E4N86_10270 PF02785 Biotin carboxylase C-terminal domain E4N86_10270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E4N86_10275 PF01039 Carboxyl transferase domain E4N86_10280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E4N86_10285 PF00221 Aromatic amino acid lyase E4N86_10300 PF03773 Predicted permease E4N86_10305 PF09323 Domain of unknown function (DUF1980) E4N86_10310 PF07726 ATPase family associated with various cellular activities (AAA) E4N86_10310 PF17863 AAA lid domain E4N86_10350 PF01425 Amidase E4N86_10355 PF02934 GatB/GatE catalytic domain E4N86_10355 PF02637 GatB domain E4N86_10365 PF01048 Phosphorylase superfamily E4N86_10395 PF01434 Peptidase family M41 E4N86_10395 PF00004 ATPase family associated with various cellular activities (AAA) E4N86_10395 PF17862 AAA+ lid domain E4N86_10400 PF02743 Cache domain E4N86_10400 PF00672 HAMP domain E4N86_10400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_10410 PF13088 BNR repeat-like domain E4N86_10410 PF04650 YSIRK type signal peptide E4N86_10410 PF02973 Sialidase, N-terminal domain E4N86_10435 PF12671 Putative amidase domain E4N86_10445 PF01680 SOR/SNZ family E4N86_10450 PF10509 Galactokinase galactose-binding signature E4N86_10450 PF08544 GHMP kinases C terminal E4N86_10450 PF00288 GHMP kinases N terminal domain E4N86_10455 PF01171 PP-loop family E4N86_10465 PF01546 Peptidase family M20/M25/M40 E4N86_10465 PF07687 Peptidase dimerisation domain E4N86_10470 PF00210 Ferritin-like domain E4N86_10475 PF01791 DeoC/LacD family aldolase E4N86_10490 PF13520 Amino acid permease E4N86_10495 PF07722 Peptidase C26 E4N86_10515 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system E4N86_10520 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system E4N86_10540 PF01702 Queuine tRNA-ribosyltransferase E4N86_10550 PF11967 Recombination protein O N terminal E4N86_10550 PF02565 Recombination protein O C terminal E4N86_10555 PF00271 Helicase conserved C-terminal domain E4N86_10555 PF00570 HRDC domain E4N86_10555 PF16124 RecQ zinc-binding E4N86_10555 PF09382 RQC domain E4N86_10555 PF00270 DEAD/DEAH box helicase E4N86_10575 PF02743 Cache domain E4N86_10575 PF00672 HAMP domain E4N86_10575 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N86_10580 PF01435 Peptidase family M48 E4N86_10590 PF03989 DNA gyrase C-terminal domain, beta-propeller E4N86_10590 PF00521 DNA gyrase/topoisomerase IV, subunit A E4N86_10595 PF02080 TrkA-C domain E4N86_10595 PF02254 TrkA-N domain E4N86_10605 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ E4N86_10620 PF00005 ABC transporter E4N86_10620 PF03412 Peptidase C39 family E4N86_10620 PF00664 ABC transporter transmembrane region E4N86_10625 PF00664 ABC transporter transmembrane region E4N86_10625 PF00005 ABC transporter E4N86_10630 PF00009 Elongation factor Tu GTP binding domain E4N86_10630 PF03764 Elongation factor G, domain IV E4N86_10630 PF14492 Elongation Factor G, domain II E4N86_10630 PF00679 Elongation factor G C-terminus E4N86_10630 PF03144 Elongation factor Tu domain 2 E4N86_10635 PF00274 Fructose-bisphosphate aldolase class-I E4N86_10640 PF02867 Ribonucleotide reductase, barrel domain E4N86_10640 PF00317 Ribonucleotide reductase, all-alpha domain E4N86_10640 PF03477 ATP cone domain E4N86_10645 PF03023 Lipid II flippase MurJ E4N86_10655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_10655 PF00672 HAMP domain E4N86_10655 PF02743 Cache domain E4N86_10665 PF08359 YsiA-like protein, C-terminal region E4N86_10665 PF00440 Bacterial regulatory proteins, tetR family E4N86_10670 PF00391 PEP-utilising enzyme, mobile domain E4N86_10670 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E4N86_10675 PF01554 MatE E4N86_10680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E4N86_10680 PF00056 lactate/malate dehydrogenase, NAD binding domain E4N86_10685 PF02502 Ribose/Galactose Isomerase E4N86_10695 PF02525 Flavodoxin-like fold E4N86_10720 PF00248 Aldo/keto reductase family E4N86_10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4N86_10725 PF03466 LysR substrate binding domain E4N86_10730 PF12146 Serine aminopeptidase, S33 E4N86_10735 PF00005 ABC transporter E4N86_10735 PF00664 ABC transporter transmembrane region E4N86_10740 PF00664 ABC transporter transmembrane region E4N86_10740 PF00005 ABC transporter E4N86_10745 PF03616 Sodium/glutamate symporter E4N86_10750 PF02368 Bacterial Ig-like domain (group 2) E4N86_10760 PF09827 CRISPR associated protein Cas2 E4N86_10775 PF00570 HRDC domain E4N86_10775 PF00271 Helicase conserved C-terminal domain E4N86_10775 PF00270 DEAD/DEAH box helicase E4N86_10775 PF16124 RecQ zinc-binding E4N86_10775 PF09382 RQC domain E4N86_10795 PF00258 Flavodoxin E4N86_10820 PF00005 ABC transporter E4N86_10825 PF00392 Bacterial regulatory proteins, gntR family E4N86_10825 PF07702 UTRA domain E4N86_10830 PF17202 Single cache domain 3 E4N86_10830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_10830 PF00672 HAMP domain E4N86_10835 PF00149 Calcineurin-like phosphoesterase E4N86_10835 PF12320 Type 5 capsule protein repressor C-terminal domain E4N86_10840 PF13476 AAA domain E4N86_10845 PF02673 Bacitracin resistance protein BacA E4N86_10850 PF17854 FtsK alpha domain E4N86_10850 PF01580 FtsK/SpoIIIE family E4N86_10850 PF09397 Ftsk gamma domain E4N86_10855 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E4N86_10855 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E4N86_10855 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain E4N86_10860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_10860 PF00672 HAMP domain E4N86_10860 PF02743 Cache domain E4N86_10865 PF01470 Pyroglutamyl peptidase E4N86_10885 PF00005 ABC transporter E4N86_10885 PF08402 TOBE domain E4N86_10890 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_10905 PF00962 Adenosine/AMP deaminase E4N86_10910 PF01925 Sulfite exporter TauE/SafE E4N86_10915 PF00892 EamA-like transporter family E4N86_10920 PF02661 Fic/DOC family E4N86_10980 PF01047 MarR family E4N86_10985 PF01209 ubiE/COQ5 methyltransferase family E4N86_11000 PF00005 ABC transporter E4N86_11020 PF01212 Beta-eliminating lyase E4N86_11025 PF00440 Bacterial regulatory proteins, tetR family E4N86_11025 PF17932 Tetracyclin repressor-like, C-terminal domain E4N86_11030 PF00005 ABC transporter E4N86_11030 PF00664 ABC transporter transmembrane region E4N86_11035 PF00664 ABC transporter transmembrane region E4N86_11035 PF00005 ABC transporter E4N86_11040 PF00664 ABC transporter transmembrane region E4N86_11040 PF00005 ABC transporter E4N86_11045 PF00664 ABC transporter transmembrane region E4N86_11045 PF00005 ABC transporter E4N86_11070 PF00005 ABC transporter E4N86_11085 PF00664 ABC transporter transmembrane region E4N86_11085 PF00005 ABC transporter E4N86_11090 PF04954 Siderophore-interacting protein E4N86_11090 PF08021 Siderophore-interacting FAD-binding domain E4N86_11090 PF00005 ABC transporter E4N86_11090 PF00664 ABC transporter transmembrane region E4N86_11110 PF00005 ABC transporter E4N86_11110 PF00664 ABC transporter transmembrane region E4N86_11130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E4N86_11135 PF02504 Fatty acid synthesis protein E4N86_11140 PF00085 Thioredoxin E4N86_11145 PF00013 KH domain E4N86_11145 PF01966 HD domain E4N86_11145 PF12072 Domain of unknown function (DUF3552) E4N86_11150 PF00005 ABC transporter E4N86_11155 PF12161 HsdM N-terminal domain E4N86_11155 PF02384 N-6 DNA Methylase E4N86_11175 PF01420 Type I restriction modification DNA specificity domain E4N86_11180 PF12008 Type I restriction and modification enzyme - subunit R C terminal E4N86_11180 PF18766 SWI2/SNF2 ATPase E4N86_11180 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E4N86_11185 PF13784 Fic/DOC family N-terminal E4N86_11185 PF02661 Fic/DOC family E4N86_11190 PF01661 Macro domain E4N86_11195 PF02767 DNA polymerase III beta subunit, central domain E4N86_11195 PF00712 DNA polymerase III beta subunit, N-terminal domain E4N86_11195 PF02768 DNA polymerase III beta subunit, C-terminal domain E4N86_11200 PF02463 RecF/RecN/SMC N terminal domain E4N86_11215 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB E4N86_11220 PF01381 Helix-turn-helix E4N86_11235 PF16123 Hydroxyacylglutathione hydrolase C-terminus E4N86_11235 PF00753 Metallo-beta-lactamase superfamily E4N86_11245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E4N86_11245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E4N86_11255 PF07690 Major Facilitator Superfamily E4N86_11260 PF07687 Peptidase dimerisation domain E4N86_11260 PF01546 Peptidase family M20/M25/M40 E4N86_11300 PF07238 PilZ domain E4N86_11315 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_11330 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP E4N86_11330 PF12557 Cob(I)alamin adenosyltransferase N terminal E4N86_11335 PF03600 Citrate transporter E4N86_11340 PF05656 Protein of unknown function (DUF805) E4N86_11345 PF02595 Glycerate kinase family E4N86_11365 PF00749 tRNA synthetases class I (E and Q), catalytic domain E4N86_11380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E4N86_11410 PF00664 ABC transporter transmembrane region E4N86_11410 PF00005 ABC transporter E4N86_11415 PF00664 ABC transporter transmembrane region E4N86_11415 PF00005 ABC transporter E4N86_11415 PF08021 Siderophore-interacting FAD-binding domain E4N86_11415 PF04954 Siderophore-interacting protein E4N86_11430 PF00005 ABC transporter E4N86_11445 PF00440 Bacterial regulatory proteins, tetR family E4N86_11460 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E4N86_11465 PF01594 AI-2E family transporter E4N86_11470 PF00268 Ribonucleotide reductase, small chain E4N86_11475 PF08281 Sigma-70, region 4 E4N86_11475 PF04542 Sigma-70 region 2 E4N86_11495 PF01554 MatE E4N86_11500 PF00440 Bacterial regulatory proteins, tetR family E4N86_11515 PF00005 ABC transporter E4N86_11515 PF09383 NIL domain E4N86_11530 PF02511 Thymidylate synthase complementing protein E4N86_11535 PF02386 Cation transport protein E4N86_11540 PF02080 TrkA-C domain E4N86_11540 PF02254 TrkA-N domain E4N86_11550 PF00664 ABC transporter transmembrane region E4N86_11550 PF00005 ABC transporter E4N86_11565 PF07726 ATPase family associated with various cellular activities (AAA) E4N86_11565 PF17863 AAA lid domain E4N86_11570 PF01595 Cyclin M transmembrane N-terminal domain E4N86_11570 PF00571 CBS domain E4N86_11570 PF03471 Transporter associated domain E4N86_11575 PF00571 CBS domain E4N86_11575 PF03471 Transporter associated domain E4N86_11575 PF01595 Cyclin M transmembrane N-terminal domain E4N86_11590 PF01081 KDPG and KHG aldolase E4N86_11605 PF00672 HAMP domain E4N86_11605 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N86_11610 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N86_11615 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_11615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4N86_11635 PF00196 Bacterial regulatory proteins, luxR family E4N86_11635 PF00072 Response regulator receiver domain E4N86_11640 PF07730 Histidine kinase E4N86_11645 PF01546 Peptidase family M20/M25/M40 E4N86_11645 PF07687 Peptidase dimerisation domain E4N86_11655 PF13173 AAA domain E4N86_11655 PF13635 Domain of unknown function (DUF4143) E4N86_11660 PF00005 ABC transporter E4N86_11660 PF08402 TOBE domain E4N86_11665 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_11670 PF01547 Bacterial extracellular solute-binding protein E4N86_11685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_11685 PF02743 Cache domain E4N86_11685 PF00672 HAMP domain E4N86_11695 PF00375 Sodium:dicarboxylate symporter family E4N86_11700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E4N86_11700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E4N86_11700 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain E4N86_11700 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain E4N86_11705 PF08448 PAS fold E4N86_11705 PF00563 EAL domain E4N86_11705 PF00990 Diguanylate cyclase, GGDEF domain E4N86_11720 PF00990 Diguanylate cyclase, GGDEF domain E4N86_11720 PF00072 Response regulator receiver domain E4N86_11735 PF01207 Dihydrouridine synthase (Dus) E4N86_11740 PF01850 PIN domain E4N86_11745 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E4N86_11765 PF00155 Aminotransferase class I and II E4N86_11785 PF03824 High-affinity nickel-transport protein E4N86_11800 PF04468 PSP1 C-terminal conserved region E4N86_11805 PF03885 Protein of unknown function (DUF327) E4N86_11815 PF04225 Opacity-associated protein A LysM-like domain E4N86_11815 PF01551 Peptidase family M23 E4N86_11820 PF01409 tRNA synthetases class II core domain (F) E4N86_11830 PF00128 Alpha amylase, catalytic domain E4N86_11840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E4N86_11840 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_11845 PF00175 Oxidoreductase NAD-binding domain E4N86_11845 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E4N86_11845 PF00970 Oxidoreductase FAD-binding domain E4N86_11850 PF02971 Formiminotransferase domain E4N86_11850 PF07837 Formiminotransferase domain, N-terminal subdomain E4N86_11870 PF00883 Cytosol aminopeptidase family, catalytic domain E4N86_11870 PF02789 Cytosol aminopeptidase family, N-terminal domain E4N86_11895 PF06071 Protein of unknown function (DUF933) E4N86_11895 PF01926 50S ribosome-binding GTPase E4N86_11900 PF01343 Peptidase family S49 E4N86_11905 PF08245 Mur ligase middle domain E4N86_11905 PF02875 Mur ligase family, glutamate ligase domain E4N86_11925 PF00005 ABC transporter E4N86_11925 PF08402 TOBE domain E4N86_11930 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_11940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_11945 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_11950 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_11950 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_11955 PF00005 ABC transporter E4N86_11955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_11960 PF00005 ABC transporter E4N86_11960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_11970 PF01869 BadF/BadG/BcrA/BcrD ATPase family E4N86_11980 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component E4N86_11995 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component E4N86_12005 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_12010 PF12911 N-terminal TM domain of oligopeptide transport permease C E4N86_12010 PF00528 Binding-protein-dependent transport system inner membrane component E4N86_12015 PF00005 ABC transporter E4N86_12015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_12020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E4N86_12020 PF00005 ABC transporter E4N86_12025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E4N86_12035 PF03466 LysR substrate binding domain E4N86_12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E4N86_12040 PF02743 Cache domain E4N86_12040 PF00211 Adenylate and Guanylate cyclase catalytic domain E4N86_12040 PF00672 HAMP domain E4N86_12055 PF09820 Predicted AAA-ATPase E4N86_12055 PF08011 PD-(D/E)XK nuclease superfamily E4N86_12060 PF01048 Phosphorylase superfamily E4N86_12065 PF01761 3-dehydroquinate synthase E4N86_12070 PF00266 Aminotransferase class-V E4N86_12080 PF00128 Alpha amylase, catalytic domain E4N86_12080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) E4N86_12085 PF07676 WD40-like Beta Propeller Repeat E4N86_12085 PF00326 Prolyl oligopeptidase family E4N86_12090 PF01555 DNA methylase E4N86_12090 PF18273 Type III R-M EcoP15I C-terminal domain E4N86_12100 PF02661 Fic/DOC family E4N86_12100 PF12728 Helix-turn-helix domain E4N86_12105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E4N86_12105 PF07992 Pyridine nucleotide-disulphide oxidoreductase E4N86_12115 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E4N86_12115 PF01565 FAD binding domain E4N86_12120 PF01406 tRNA synthetases class I (C) catalytic domain E4N86_12120 PF09190 DALR domain E4N86_12135 PF01841 Transglutaminase-like superfamily E4N86_12140 PF02386 Cation transport protein E4N86_12145 PF02254 TrkA-N domain E4N86_12145 PF02080 TrkA-C domain E4N86_12150 PF12705 PD-(D/E)XK nuclease superfamily E4N86_12155 PF00580 UvrD/REP helicase N-terminal domain E4N86_12155 PF13361 UvrD-like helicase C-terminal domain E4N86_12155 PF12705 PD-(D/E)XK nuclease superfamily E4N86_12190 PF05524 PEP-utilising enzyme, N-terminal E4N86_12190 PF00391 PEP-utilising enzyme, mobile domain E4N86_12190 PF02896 PEP-utilising enzyme, TIM barrel domain E4N86_12195 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E4N86_12195 PF01926 50S ribosome-binding GTPase E4N86_12210 PF12729 Four helix bundle sensory module for signal transduction E4N86_12210 PF00672 HAMP domain E4N86_12210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E4N86_12215 PF12392 Collagenase E4N86_12215 PF01136 Peptidase family U32 E4N86_12220 PF00140 Sigma-70 factor, region 1.2 E4N86_12220 PF04542 Sigma-70 region 2 E4N86_12220 PF04539 Sigma-70 region 3 E4N86_12220 PF04545 Sigma-70, region 4 E4N86_12220 PF03979 Sigma-70 factor, region 1.1 E4N86_12230 PF07687 Peptidase dimerisation domain E4N86_12230 PF01546 Peptidase family M20/M25/M40 E4N86_12235 PF13545 Crp-like helix-turn-helix domain E4N86_12235 PF00027 Cyclic nucleotide-binding domain E4N86_12250 PF00365 Phosphofructokinase E4N86_12295 PF01192 RNA polymerase Rpb6 E4N86_12300 PF00005 ABC transporter E4N86_12305 PF00005 ABC transporter E4N86_12310 PF00771 FHIPEP family E4N86_12315 PF01312 FlhB HrpN YscU SpaS Family E4N86_12320 PF01311 Bacterial export proteins, family 1 E4N86_12325 PF01313 Bacterial export proteins, family 3 E4N86_12345 PF01979 Amidohydrolase family E4N86_12355 PF00005 ABC transporter E4N86_12360 PF13174 Tetratricopeptide repeat E4N86_12360 PF13176 Tetratricopeptide repeat E4N86_12365 PF01515 Phosphate acetyl/butaryl transferase E4N86_12370 PF08279 HTH domain E4N86_12370 PF02237 Biotin protein ligase C terminal domain E4N86_12370 PF03099 Biotin/lipoate A/B protein ligase family E4N86_12375 PF13193 AMP-binding enzyme C-terminal domain E4N86_12375 PF00501 AMP-binding enzyme E4N86_12380 PF00109 Beta-ketoacyl synthase, N-terminal domain E4N86_12380 PF02801 Beta-ketoacyl synthase, C-terminal domain E4N86_12390 PF01230 HIT domain E4N86_12405 PF00072 Response regulator receiver domain E4N86_12405 PF04397 LytTr DNA-binding domain E4N86_12430 PF00664 ABC transporter transmembrane region E4N86_12430 PF00005 ABC transporter E4N86_12435 PF00005 ABC transporter E4N86_12460 PF01915 Glycosyl hydrolase family 3 C-terminal domain E4N86_12460 PF00933 Glycosyl hydrolase family 3 N terminal domain E4N86_12480 PF03129 Anticodon binding domain E4N86_12480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E4N86_12485 PF01268 Formate--tetrahydrofolate ligase E4N86_12490 PF00756 Putative esterase E4N86_12490 PF01476 LysM domain E4N86_12495 PF05343 M42 glutamyl aminopeptidase E4N86_12500 PF16193 AAA C-terminal domain E4N86_12500 PF12002 MgsA AAA+ ATPase C terminal E4N86_12500 PF05496 Holliday junction DNA helicase RuvB P-loop domain E4N86_12510 PF13505 Outer membrane protein beta-barrel domain E4N86_12515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E4N86_12515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E4N86_12520 PF02554 Carbon starvation protein CstA E4N86_12525 PF10417 C-terminal domain of 1-Cys peroxiredoxin E4N86_12525 PF00578 AhpC/TSA family E4N86_12530 PF00293 NUDIX domain E4N86_12540 PF00403 Heavy-metal-associated domain E4N86_12550 PF00176 SNF2 family N-terminal domain E4N86_12550 PF12419 SNF2 Helicase protein E4N86_12550 PF00271 Helicase conserved C-terminal domain E4N86_12570 PF00986 DNA gyrase B subunit, carboxyl terminus E4N86_12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E4N86_12570 PF00204 DNA gyrase B E4N86_12570 PF01751 Toprim domain