locus-tag class description C5N99_00005 PF01420 Type I restriction modification DNA specificity domain C5N99_00015 PF01420 Type I restriction modification DNA specificity domain C5N99_00020 PF02899 Phage integrase, N-terminal SAM-like domain C5N99_00020 PF00589 Phage integrase family C5N99_00025 PF01850 PIN domain C5N99_00030 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C5N99_00035 PF01420 Type I restriction modification DNA specificity domain C5N99_00050 PF00580 UvrD/REP helicase N-terminal domain C5N99_00050 PF13361 UvrD-like helicase C-terminal domain C5N99_00055 PF01814 Hemerythrin HHE cation binding domain C5N99_00060 PF09028 Mac 1 C5N99_00100 PF09382 RQC domain C5N99_00100 PF00270 DEAD/DEAH box helicase C5N99_00100 PF00271 Helicase conserved C-terminal domain C5N99_00100 PF00570 HRDC domain C5N99_00100 PF16124 RecQ zinc-binding C5N99_00105 PF01048 Phosphorylase superfamily C5N99_00130 PF00005 ABC transporter C5N99_00135 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_00155 PF01479 S4 domain C5N99_00155 PF00849 RNA pseudouridylate synthase C5N99_00160 PF00672 HAMP domain C5N99_00160 PF02743 Cache domain C5N99_00160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_00180 PF00005 ABC transporter C5N99_00185 PF12683 Protein of unknown function (DUF3798) C5N99_00190 PF00892 EamA-like transporter family C5N99_00195 PF13419 Haloacid dehalogenase-like hydrolase C5N99_00200 PF13808 DDE_Tnp_1-associated C5N99_00200 PF01609 Transposase DDE domain C5N99_00205 PF12733 Cadherin-like beta sandwich domain C5N99_00205 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) C5N99_00215 PF02743 Cache domain C5N99_00215 PF00672 HAMP domain C5N99_00215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_00230 PF03471 Transporter associated domain C5N99_00230 PF01595 Cyclin M transmembrane N-terminal domain C5N99_00230 PF00571 CBS domain C5N99_00235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_00235 PF02743 Cache domain C5N99_00235 PF00672 HAMP domain C5N99_00250 PF00692 dUTPase C5N99_00255 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C5N99_00255 PF03725 3' exoribonuclease family, domain 2 C5N99_00255 PF00013 KH domain C5N99_00255 PF01138 3' exoribonuclease family, domain 1 C5N99_00255 PF00575 S1 RNA binding domain C5N99_00260 PF00312 Ribosomal protein S15 C5N99_00265 PF01687 Riboflavin kinase C5N99_00265 PF06574 FAD synthetase C5N99_00270 PF01509 TruB family pseudouridylate synthase (N terminal domain) C5N99_00270 PF16198 tRNA pseudouridylate synthase B C-terminal domain C5N99_00275 PF02033 Ribosome-binding factor A C5N99_00280 PF11987 Translation-initiation factor 2 C5N99_00280 PF04760 Translation initiation factor IF-2, N-terminal region C5N99_00280 PF00009 Elongation factor Tu GTP binding domain C5N99_00285 PF00575 S1 RNA binding domain C5N99_00285 PF08529 NusA N-terminal domain C5N99_00285 PF13184 NusA-like KH domain C5N99_00290 PF17384 RimP C-terminal SH3 domain C5N99_00290 PF02576 RimP N-terminal domain C5N99_00310 PF01966 HD domain C5N99_00310 PF01467 Cytidylyltransferase-like C5N99_00315 PF01467 Cytidylyltransferase-like C5N99_00320 PF01926 50S ribosome-binding GTPase C5N99_00320 PF01018 GTP1/OBG C5N99_00325 PF01016 Ribosomal L27 protein C5N99_00335 PF00829 Ribosomal prokaryotic L21 protein C5N99_00340 PF01430 Hsp33 protein C5N99_00345 PF00035 Double-stranded RNA binding motif C5N99_00345 PF14622 Ribonuclease-III-like C5N99_00350 PF00550 Phosphopantetheine attachment site C5N99_00355 PF01783 Ribosomal L32p protein family C5N99_00370 PF00535 Glycosyl transferase family 2 C5N99_00370 PF02709 N-terminal domain of galactosyltransferase C5N99_00375 PF01168 Alanine racemase, N-terminal domain C5N99_00390 PF01207 Dihydrouridine synthase (Dus) C5N99_00405 PF03841 L-seryl-tRNA selenium transferase C5N99_00405 PF12390 Selenocysteine synthase N terminal C5N99_00410 PF09107 Elongation factor SelB, winged helix C5N99_00410 PF09106 Elongation factor SelB, winged helix C5N99_00410 PF09105 Elongation factor SelB, winged helix C5N99_00410 PF03144 Elongation factor Tu domain 2 C5N99_00410 PF00009 Elongation factor Tu GTP binding domain C5N99_00420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_00420 PF00672 HAMP domain C5N99_00420 PF02743 Cache domain C5N99_00435 PF04452 RNA methyltransferase C5N99_00440 PF01699 Sodium/calcium exchanger protein C5N99_00445 PF00171 Aldehyde dehydrogenase family C5N99_00450 PF02770 Acyl-CoA dehydrogenase, middle domain C5N99_00450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C5N99_00450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C5N99_00455 PF01012 Electron transfer flavoprotein domain C5N99_00460 PF00766 Electron transfer flavoprotein FAD-binding domain C5N99_00460 PF01012 Electron transfer flavoprotein domain C5N99_00470 PF01381 Helix-turn-helix C5N99_00470 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system C5N99_00505 PF12705 PD-(D/E)XK nuclease superfamily C5N99_00510 PF00258 Flavodoxin C5N99_00515 PF00106 short chain dehydrogenase C5N99_00530 PF04055 Radical SAM superfamily C5N99_00545 PF10502 Signal peptidase, peptidase S26 C5N99_00555 PF00574 Clp protease C5N99_00560 PF17757 UvrB interaction domain C5N99_00560 PF12344 Ultra-violet resistance protein B C5N99_00560 PF00271 Helicase conserved C-terminal domain C5N99_00560 PF02151 UvrB/uvrC motif C5N99_00560 PF04851 Type III restriction enzyme, res subunit C5N99_00570 PF00586 AIR synthase related protein, N-terminal domain C5N99_00570 PF02769 AIR synthase related protein, C-terminal domain C5N99_00595 PF05973 Phage derived protein Gp49-like (DUF891) C5N99_00605 PF00266 Aminotransferase class-V C5N99_00610 PF02608 ABC transporter substrate-binding protein PnrA-like C5N99_00615 PF00005 ABC transporter C5N99_00620 PF02653 Branched-chain amino acid transport system / permease component C5N99_00625 PF02653 Branched-chain amino acid transport system / permease component C5N99_00635 PF13495 Phage integrase, N-terminal SAM-like domain C5N99_00635 PF00589 Phage integrase family C5N99_00645 PF01934 Protein of unknown function DUF86 C5N99_00670 PF00871 Acetokinase family C5N99_00680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C5N99_00680 PF02403 Seryl-tRNA synthetase N-terminal domain C5N99_00685 PF03840 Preprotein translocase SecG subunit C5N99_00690 PF00563 EAL domain C5N99_00690 PF01590 GAF domain C5N99_00690 PF00990 Diguanylate cyclase, GGDEF domain C5N99_00690 PF00360 Phytochrome region C5N99_00695 PF00679 Elongation factor G C-terminus C5N99_00695 PF00009 Elongation factor Tu GTP binding domain C5N99_00695 PF03144 Elongation factor Tu domain 2 C5N99_00695 PF14492 Elongation Factor G, domain II C5N99_00695 PF03764 Elongation factor G, domain IV C5N99_00700 PF00365 Phosphofructokinase C5N99_00705 PF13393 Histidyl-tRNA synthetase C5N99_00710 PF00575 S1 RNA binding domain C5N99_00715 PF00072 Response regulator receiver domain C5N99_00715 PF02954 Bacterial regulatory protein, Fis family C5N99_00715 PF00158 Sigma-54 interaction domain C5N99_00730 PF00672 HAMP domain C5N99_00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_00730 PF02743 Cache domain C5N99_00735 PF00672 HAMP domain C5N99_00735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_00735 PF12729 Four helix bundle sensory module for signal transduction C5N99_00755 PF07196 Flagellin hook IN motif C5N99_00755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5N99_00760 PF00700 Bacterial flagellin C-terminal helical region C5N99_00760 PF00669 Bacterial flagellin N-terminal helical region C5N99_00765 PF02623 FliW protein C5N99_00770 PF02599 Global regulator protein family C5N99_00775 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_00780 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_00785 PF01547 Bacterial extracellular solute-binding protein C5N99_00790 PF01966 HD domain C5N99_00790 PF00672 HAMP domain C5N99_00795 PF00814 Glycoprotease family C5N99_00800 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C5N99_00805 PF00849 RNA pseudouridylate synthase C5N99_00815 PF02390 Putative methyltransferase C5N99_00830 PF08323 Starch synthase catalytic domain C5N99_00830 PF00534 Glycosyl transferases group 1 C5N99_00865 PF00206 Lyase C5N99_00865 PF10415 Fumarase C C-terminus C5N99_00870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C5N99_00885 PF01081 KDPG and KHG aldolase C5N99_00900 PF00860 Permease family C5N99_00925 PF07075 Protein of unknown function (DUF1343) C5N99_00940 PF00571 CBS domain C5N99_00940 PF03448 MgtE intracellular N domain C5N99_00940 PF01769 Divalent cation transporter C5N99_00950 PF13735 tRNA nucleotidyltransferase domain 2 putative C5N99_00950 PF01743 Poly A polymerase head domain C5N99_00950 PF12627 Probable RNA and SrmB- binding site of polymerase A C5N99_00960 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) C5N99_00960 PF12733 Cadherin-like beta sandwich domain C5N99_00965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C5N99_00980 PF00860 Permease family C5N99_00985 PF00990 Diguanylate cyclase, GGDEF domain C5N99_00995 PF01025 GrpE C5N99_01000 PF00012 Hsp70 protein C5N99_01005 PF01556 DnaJ C terminal domain C5N99_01005 PF00684 DnaJ central domain C5N99_01005 PF00226 DnaJ domain C5N99_01020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C5N99_01020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C5N99_01030 PF04471 Restriction endonuclease C5N99_01030 PF14338 Mrr N-terminal domain C5N99_01040 PF08546 Ketopantoate reductase PanE/ApbA C terminal C5N99_01040 PF02558 Ketopantoate reductase PanE/ApbA C5N99_01045 PF00459 Inositol monophosphatase family C5N99_01050 PF00005 ABC transporter C5N99_01055 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_01065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C5N99_01065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C5N99_01065 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C5N99_01065 PF10371 Domain of unknown function C5N99_01065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C5N99_01070 PF00271 Helicase conserved C-terminal domain C5N99_01070 PF12300 ATP-dependent RNA helicase RhlB C5N99_01070 PF00270 DEAD/DEAH box helicase C5N99_01075 PF07687 Peptidase dimerisation domain C5N99_01075 PF01546 Peptidase family M20/M25/M40 C5N99_01080 PF01025 GrpE C5N99_01095 PF02386 Cation transport protein C5N99_01100 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB C5N99_01105 PF01381 Helix-turn-helix C5N99_01120 PF00501 AMP-binding enzyme C5N99_01120 PF13193 AMP-binding enzyme C-terminal domain C5N99_01125 PF00521 DNA gyrase/topoisomerase IV, subunit A C5N99_01130 PF02779 Transketolase, pyrimidine binding domain C5N99_01130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C5N99_01130 PF02780 Transketolase, C-terminal domain C5N99_01145 PF01263 Aldose 1-epimerase C5N99_01150 PF01991 ATP synthase (E/31 kDa) subunit C5N99_01160 PF02874 ATP synthase alpha/beta family, beta-barrel domain C5N99_01160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C5N99_01160 PF16886 ATPsynthase alpha/beta subunit N-term extension C5N99_01165 PF02874 ATP synthase alpha/beta family, beta-barrel domain C5N99_01165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C5N99_01170 PF01813 ATP synthase subunit D C5N99_01185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_01185 PF00672 HAMP domain C5N99_01185 PF02743 Cache domain C5N99_01195 PF01202 Shikimate kinase C5N99_01205 PF00672 HAMP domain C5N99_01205 PF02743 Cache domain C5N99_01205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_01225 PF13307 Helicase C-terminal domain C5N99_01225 PF06733 DEAD_2 C5N99_01235 PF01668 SmpB protein C5N99_01240 PF10502 Signal peptidase, peptidase S26 C5N99_01245 PF04055 Radical SAM superfamily C5N99_01245 PF06969 HemN C-terminal domain C5N99_01260 PF04055 Radical SAM superfamily C5N99_01260 PF00919 Uncharacterized protein family UPF0004 C5N99_01265 PF18073 Rubredoxin metal binding domain C5N99_01265 PF06745 KaiC C5N99_01270 PF00595 PDZ domain C5N99_01275 PF01475 Ferric uptake regulator family C5N99_01280 PF00672 HAMP domain C5N99_01280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_01280 PF02743 Cache domain C5N99_01300 PF17762 HTH domain found in ParB protein C5N99_01300 PF02195 ParB-like nuclease domain C5N99_01305 PF13614 AAA domain C5N99_01310 PF02190 ATP-dependent protease La (LON) substrate-binding domain C5N99_01310 PF05362 Lon protease (S16) C-terminal proteolytic domain C5N99_01310 PF00004 ATPase family associated with various cellular activities (AAA) C5N99_01325 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C5N99_01325 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C5N99_01330 PF00378 Enoyl-CoA hydratase/isomerase C5N99_01335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C5N99_01335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C5N99_01360 PF16363 GDP-mannose 4,6 dehydratase C5N99_01370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C5N99_01370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C5N99_01370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C5N99_01385 PF02350 UDP-N-acetylglucosamine 2-epimerase C5N99_01410 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 C5N99_01430 PF00206 Lyase C5N99_01430 PF02655 ATP-grasp domain C5N99_01435 PF05598 Transposase domain (DUF772) C5N99_01435 PF01609 Transposase DDE domain C5N99_01440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C5N99_01445 PF00483 Nucleotidyl transferase C5N99_01450 PF00132 Bacterial transferase hexapeptide (six repeats) C5N99_01465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C5N99_01470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C5N99_01470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C5N99_01475 PF13635 Domain of unknown function (DUF4143) C5N99_01475 PF13173 AAA domain C5N99_01505 PF02127 Aminopeptidase I zinc metalloprotease (M18) C5N99_01510 PF00375 Sodium:dicarboxylate symporter family C5N99_01515 PF00391 PEP-utilising enzyme, mobile domain C5N99_01515 PF00224 Pyruvate kinase, barrel domain C5N99_01515 PF02887 Pyruvate kinase, alpha/beta domain C5N99_01525 PF00403 Heavy-metal-associated domain C5N99_01535 PF00753 Metallo-beta-lactamase superfamily C5N99_01535 PF16123 Hydroxyacylglutathione hydrolase C-terminus C5N99_01555 PF02896 PEP-utilising enzyme, TIM barrel domain C5N99_01555 PF05524 PEP-utilising enzyme, N-terminal C5N99_01555 PF00391 PEP-utilising enzyme, mobile domain C5N99_01575 PF01926 50S ribosome-binding GTPase C5N99_01575 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C5N99_01595 PF01027 Inhibitor of apoptosis-promoting Bax1 C5N99_01600 PF00579 tRNA synthetases class I (W and Y) C5N99_01605 PF03030 Inorganic H+ pyrophosphatase C5N99_01655 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain C5N99_01655 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C5N99_01655 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C5N99_01675 PF04542 Sigma-70 region 2 C5N99_01675 PF04545 Sigma-70, region 4 C5N99_01675 PF04539 Sigma-70 region 3 C5N99_01685 PF00672 HAMP domain C5N99_01685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_01685 PF02743 Cache domain C5N99_01690 PF05872 Bacterial protein of unknown function (DUF853) C5N99_01695 PF08676 MutL C terminal dimerisation domain C5N99_01695 PF01119 DNA mismatch repair protein, C-terminal domain C5N99_01700 PF02609 Exonuclease VII small subunit C5N99_01725 PF02086 D12 class N6 adenine-specific DNA methyltransferase C5N99_01795 PF00589 Phage integrase family C5N99_01795 PF13495 Phage integrase, N-terminal SAM-like domain C5N99_01800 PF00209 Sodium:neurotransmitter symporter family C5N99_01815 PF01921 tRNA synthetases class I (K) C5N99_01825 PF00381 PTS HPr component phosphorylation site C5N99_01830 PF07475 HPr Serine kinase C-terminal domain C5N99_01830 PF02603 HPr Serine kinase N terminus C5N99_01840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C5N99_01840 PF00128 Alpha amylase, catalytic domain C5N99_01845 PF00343 Carbohydrate phosphorylase C5N99_01850 PF00334 Nucleoside diphosphate kinase C5N99_01855 PF00448 SRP54-type protein, GTPase domain C5N99_01855 PF02978 Signal peptide binding domain C5N99_01855 PF02881 SRP54-type protein, helical bundle domain C5N99_01865 PF00156 Phosphoribosyl transferase domain C5N99_01870 PF02355 Protein export membrane protein C5N99_01875 PF02355 Protein export membrane protein C5N99_01885 PF02699 Preprotein translocase subunit C5N99_01890 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C5N99_01900 PF01424 R3H domain C5N99_01900 PF14804 Jag N-terminus C5N99_01905 PF14849 YidC periplasmic domain C5N99_01905 PF02096 60Kd inner membrane protein C5N99_01910 PF01809 Putative membrane protein insertion efficiency factor C5N99_01920 PF00468 Ribosomal protein L34 C5N99_01955 PF02511 Thymidylate synthase complementing protein C5N99_01960 PF01915 Glycosyl hydrolase family 3 C-terminal domain C5N99_01960 PF00933 Glycosyl hydrolase family 3 N terminal domain C5N99_01965 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5N99_01970 PF01515 Phosphate acetyl/butaryl transferase C5N99_01990 PF00118 TCP-1/cpn60 chaperonin family C5N99_02005 PF00669 Bacterial flagellin N-terminal helical region C5N99_02005 PF00700 Bacterial flagellin C-terminal helical region C5N99_02010 PF00700 Bacterial flagellin C-terminal helical region C5N99_02010 PF00669 Bacterial flagellin N-terminal helical region C5N99_02015 PF07195 Flagellar hook-associated protein 2 C-terminus C5N99_02015 PF02465 Flagellar hook-associated protein 2 N-terminus C5N99_02030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C5N99_02035 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C5N99_02035 PF00270 DEAD/DEAH box helicase C5N99_02035 PF04408 Helicase associated domain (HA2) C5N99_02035 PF00271 Helicase conserved C-terminal domain C5N99_02045 PF00579 tRNA synthetases class I (W and Y) C5N99_02050 PF01409 tRNA synthetases class II core domain (F) C5N99_02055 PF03023 Lipid II flippase MurJ C5N99_02075 PF01297 Zinc-uptake complex component A periplasmic C5N99_02080 PF12320 Type 5 capsule protein repressor C-terminal domain C5N99_02080 PF00149 Calcineurin-like phosphoesterase C5N99_02085 PF13476 AAA domain C5N99_02095 PF17131 Outer membrane lipoprotein-sorting protein C5N99_02100 PF00166 Chaperonin 10 Kd subunit C5N99_02105 PF04545 Sigma-70, region 4 C5N99_02105 PF04539 Sigma-70 region 3 C5N99_02105 PF04542 Sigma-70 region 2 C5N99_02105 PF03979 Sigma-70 factor, region 1.1 C5N99_02105 PF00140 Sigma-70 factor, region 1.2 C5N99_02120 PF00300 Histidine phosphatase superfamily (branch 1) C5N99_02125 PF00849 RNA pseudouridylate synthase C5N99_02130 PF01048 Phosphorylase superfamily C5N99_02140 PF13361 UvrD-like helicase C-terminal domain C5N99_02140 PF00580 UvrD/REP helicase N-terminal domain C5N99_02155 PF17862 AAA+ lid domain C5N99_02155 PF00004 ATPase family associated with various cellular activities (AAA) C5N99_02155 PF06480 FtsH Extracellular C5N99_02155 PF01434 Peptidase family M41 C5N99_02180 PF13280 WYL domain C5N99_02180 PF08279 HTH domain C5N99_02200 PF02229 Transcriptional Coactivator p15 (PC4) C5N99_02205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_02205 PF00672 HAMP domain C5N99_02205 PF12729 Four helix bundle sensory module for signal transduction C5N99_02215 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C5N99_02215 PF02542 YgbB family C5N99_02220 PF02542 YgbB family C5N99_02240 PF00440 Bacterial regulatory proteins, tetR family C5N99_02245 PF02903 Alpha amylase, N-terminal ig-like domain C5N99_02245 PF00128 Alpha amylase, catalytic domain C5N99_02245 PF16657 Maltogenic Amylase, C-terminal domain C5N99_02290 PF01609 Transposase DDE domain C5N99_02290 PF13808 DDE_Tnp_1-associated C5N99_02295 PF12146 Serine aminopeptidase, S33 C5N99_02300 PF07977 FabA-like domain C5N99_02305 PF02801 Beta-ketoacyl synthase, C-terminal domain C5N99_02305 PF00109 Beta-ketoacyl synthase, N-terminal domain C5N99_02340 PF00698 Acyl transferase domain C5N99_02345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C5N99_02345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C5N99_02350 PF00271 Helicase conserved C-terminal domain C5N99_02350 PF00270 DEAD/DEAH box helicase C5N99_02370 PF07687 Peptidase dimerisation domain C5N99_02370 PF01546 Peptidase family M20/M25/M40 C5N99_02375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C5N99_02375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C5N99_02380 PF00950 ABC 3 transport family C5N99_02385 PF07650 KH domain C5N99_02385 PF01926 50S ribosome-binding GTPase C5N99_02390 PF04060 Putative Fe-S cluster C5N99_02390 PF00037 4Fe-4S binding domain C5N99_02390 PF13187 4Fe-4S dicluster domain C5N99_02395 PF02508 Rnf-Nqr subunit, membrane protein C5N99_02400 PF02508 Rnf-Nqr subunit, membrane protein C5N99_02405 PF04205 FMN-binding domain C5N99_02410 PF03116 NQR2, RnfD, RnfE family C5N99_02415 PF13237 4Fe-4S dicluster domain C5N99_02415 PF10531 SLBB domain C5N99_02415 PF13375 RnfC Barrel sandwich hybrid domain C5N99_02415 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C5N99_02420 PF07055 Enoyl reductase FAD binding domain C5N99_02420 PF12241 Trans-2-enoyl-CoA reductase catalytic region C5N99_02420 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C5N99_02425 PF00364 Biotin-requiring enzyme C5N99_02430 PF02785 Biotin carboxylase C-terminal domain C5N99_02430 PF00289 Biotin carboxylase, N-terminal domain C5N99_02430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C5N99_02435 PF01039 Carboxyl transferase domain C5N99_02440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C5N99_02450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C5N99_02450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C5N99_02455 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C5N99_02455 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C5N99_02460 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C5N99_02465 PF01180 Dihydroorotate dehydrogenase C5N99_02470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C5N99_02475 PF01979 Amidohydrolase family C5N99_02480 PF00156 Phosphoribosyl transferase domain C5N99_02485 PF03461 TRCF domain C5N99_02485 PF00271 Helicase conserved C-terminal domain C5N99_02485 PF00270 DEAD/DEAH box helicase C5N99_02485 PF02559 CarD-like/TRCF domain C5N99_02485 PF17757 UvrB interaction domain C5N99_02490 PF13545 Crp-like helix-turn-helix domain C5N99_02490 PF00027 Cyclic nucleotide-binding domain C5N99_02500 PF02811 PHP domain C5N99_02510 PF09338 Glycine/sarcosine/betaine reductase component B subunits C5N99_02515 PF13808 DDE_Tnp_1-associated C5N99_02515 PF01609 Transposase DDE domain C5N99_02530 PF00488 MutS domain V C5N99_02530 PF01713 Smr domain C5N99_02540 PF02773 S-adenosylmethionine synthetase, C-terminal domain C5N99_02540 PF02772 S-adenosylmethionine synthetase, central domain C5N99_02540 PF00438 S-adenosylmethionine synthetase, N-terminal domain C5N99_02580 PF00436 Single-strand binding protein family C5N99_02585 PF03949 Malic enzyme, NAD binding domain C5N99_02585 PF00390 Malic enzyme, N-terminal domain C5N99_02590 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C5N99_02590 PF00056 lactate/malate dehydrogenase, NAD binding domain C5N99_02635 PF03033 Glycosyltransferase family 28 N-terminal domain C5N99_02635 PF04101 Glycosyltransferase family 28 C-terminal domain C5N99_02645 PF01008 Initiation factor 2 subunit family C5N99_02655 PF00270 DEAD/DEAH box helicase C5N99_02655 PF00271 Helicase conserved C-terminal domain C5N99_02670 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_02675 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_02695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C5N99_02695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C5N99_02700 PF04198 Putative sugar-binding domain C5N99_02705 PF00005 ABC transporter C5N99_02710 PF02653 Branched-chain amino acid transport system / permease component C5N99_02715 PF02653 Branched-chain amino acid transport system / permease component C5N99_02720 PF13407 Periplasmic binding protein domain C5N99_02725 PF01791 DeoC/LacD family aldolase C5N99_02740 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_02745 PF00005 ABC transporter C5N99_02745 PF09383 NIL domain C5N99_02750 PF00595 PDZ domain C5N99_02755 PF02743 Cache domain C5N99_02755 PF00211 Adenylate and Guanylate cyclase catalytic domain C5N99_02755 PF00672 HAMP domain C5N99_02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5N99_02760 PF00672 HAMP domain C5N99_02760 PF00512 His Kinase A (phospho-acceptor) domain C5N99_02765 PF00072 Response regulator receiver domain C5N99_02765 PF00486 Transcriptional regulatory protein, C terminal C5N99_02780 PF10141 Single-strand DNA-specific exonuclease, C terminal domain C5N99_02780 PF17768 RecJ OB domain C5N99_02780 PF02272 DHHA1 domain C5N99_02780 PF01368 DHH family C5N99_02785 PF00591 Glycosyl transferase family, a/b domain C5N99_02785 PF02885 Glycosyl transferase family, helical bundle domain C5N99_02785 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C5N99_02790 PF08543 Phosphomethylpyrimidine kinase C5N99_02810 PF01171 PP-loop family C5N99_02825 PF01389 OmpA-like transmembrane domain C5N99_02825 PF00691 OmpA family C5N99_02830 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system C5N99_02835 PF00145 C-5 cytosine-specific DNA methylase C5N99_02835 PF01381 Helix-turn-helix C5N99_02840 PF00999 Sodium/hydrogen exchanger family C5N99_02840 PF03471 Transporter associated domain C5N99_02850 PF02872 5'-nucleotidase, C-terminal domain C5N99_02850 PF00149 Calcineurin-like phosphoesterase C5N99_02860 PF02743 Cache domain C5N99_02860 PF00672 HAMP domain C5N99_02860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_02865 PF03577 Peptidase family C69 C5N99_02885 PF01022 Bacterial regulatory protein, arsR family C5N99_02890 PF00403 Heavy-metal-associated domain C5N99_02895 PF01546 Peptidase family M20/M25/M40 C5N99_02895 PF07687 Peptidase dimerisation domain C5N99_02920 PF03781 Sulfatase-modifying factor enzyme 1 C5N99_02940 PF17941 Polyphosphate kinase C-terminal domain 1 C5N99_02940 PF13090 Polyphosphate kinase C-terminal domain 2 C5N99_02940 PF02503 Polyphosphate kinase middle domain C5N99_02940 PF13089 Polyphosphate kinase N-terminal domain C5N99_02945 PF01204 Trehalase C5N99_02950 PF02637 GatB domain C5N99_02950 PF02934 GatB/GatE catalytic domain C5N99_02980 PF03575 Peptidase family S51 C5N99_03005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5N99_03005 PF03466 LysR substrate binding domain C5N99_03050 PF00210 Ferritin-like domain C5N99_03060 PF03572 Peptidase family S41 C5N99_03060 PF13180 PDZ domain C5N99_03065 PF04452 RNA methyltransferase C5N99_03075 PF01636 Phosphotransferase enzyme family C5N99_03080 PF01728 FtsJ-like methyltransferase C5N99_03085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_03085 PF02743 Cache domain C5N99_03085 PF00672 HAMP domain C5N99_03095 PF01196 Ribosomal protein L17 C5N99_03100 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C5N99_03100 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C5N99_03100 PF01000 RNA polymerase Rpb3/RpoA insert domain C5N99_03105 PF00411 Ribosomal protein S11 C5N99_03110 PF00416 Ribosomal protein S13/S18 C5N99_03115 PF00444 Ribosomal protein L36 C5N99_03120 PF00344 SecY translocase C5N99_03125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C5N99_03130 PF00327 Ribosomal protein L30p/L7e C5N99_03135 PF03719 Ribosomal protein S5, C-terminal domain C5N99_03135 PF00333 Ribosomal protein S5, N-terminal domain C5N99_03140 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C5N99_03145 PF00347 Ribosomal protein L6 C5N99_03150 PF00410 Ribosomal protein S8 C5N99_03155 PF00253 Ribosomal protein S14p/S29e C5N99_03160 PF00673 ribosomal L5P family C-terminus C5N99_03160 PF00281 Ribosomal protein L5 C5N99_03165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C5N99_03165 PF00467 KOW motif C5N99_03170 PF00238 Ribosomal protein L14p/L23e C5N99_03175 PF00366 Ribosomal protein S17 C5N99_03180 PF00831 Ribosomal L29 protein C5N99_03185 PF00252 Ribosomal protein L16p/L10e C5N99_03190 PF00189 Ribosomal protein S3, C-terminal domain C5N99_03190 PF07650 KH domain C5N99_03195 PF00237 Ribosomal protein L22p/L17e C5N99_03200 PF00203 Ribosomal protein S19 C5N99_03205 PF03947 Ribosomal Proteins L2, C-terminal domain C5N99_03205 PF00181 Ribosomal Proteins L2, RNA binding domain C5N99_03210 PF00276 Ribosomal protein L23 C5N99_03215 PF00573 Ribosomal protein L4/L1 family C5N99_03220 PF00297 Ribosomal protein L3 C5N99_03225 PF00338 Ribosomal protein S10p/S20e C5N99_03230 PF03143 Elongation factor Tu C-terminal domain C5N99_03230 PF00009 Elongation factor Tu GTP binding domain C5N99_03230 PF03144 Elongation factor Tu domain 2 C5N99_03245 PF00994 Probable molybdopterin binding domain C5N99_03255 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_03260 PF17845 FbpC C-terminal regulatory nucleotide binding domain C5N99_03260 PF00005 ABC transporter C5N99_03265 PF08011 PD-(D/E)XK nuclease superfamily C5N99_03265 PF09820 Predicted AAA-ATPase C5N99_03280 PF03484 tRNA synthetase B5 domain C5N99_03280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C5N99_03315 PF01464 Transglycosylase SLT domain C5N99_03320 PF02673 Bacitracin resistance protein BacA C5N99_03325 PF01580 FtsK/SpoIIIE family C5N99_03325 PF17854 FtsK alpha domain C5N99_03325 PF09397 Ftsk gamma domain C5N99_03330 PF02743 Cache domain C5N99_03330 PF00672 HAMP domain C5N99_03330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_03345 PF01029 NusB family C5N99_03350 PF13145 PPIC-type PPIASE domain C5N99_03355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C5N99_03355 PF01411 tRNA synthetases class II (A) C5N99_03360 PF01026 TatD related DNase C5N99_03370 PF03330 Lytic transglycolase C5N99_03435 PF17863 AAA lid domain C5N99_03435 PF07726 ATPase family associated with various cellular activities (AAA) C5N99_03445 PF09820 Predicted AAA-ATPase C5N99_03445 PF08011 PD-(D/E)XK nuclease superfamily C5N99_03465 PF01136 Peptidase family U32 C5N99_03465 PF12392 Collagenase C5N99_03475 PF01592 NifU-like N terminal domain C5N99_03480 PF00672 HAMP domain C5N99_03480 PF02743 Cache domain C5N99_03480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_03485 PF05491 RuvB C-terminal winged helix domain C5N99_03485 PF05496 Holliday junction DNA helicase RuvB P-loop domain C5N99_03485 PF17864 RuvB AAA lid domain C5N99_03495 PF01134 Glucose inhibited division protein A C5N99_03495 PF13932 GidA associated domain C5N99_03500 PF00962 Adenosine/AMP deaminase C5N99_03505 PF01791 DeoC/LacD family aldolase C5N99_03520 PF03553 Na+/H+ antiporter family C5N99_03525 PF00990 Diguanylate cyclase, GGDEF domain C5N99_03530 PF17158 Membrane-associated sensor, integral membrane domain C5N99_03530 PF00990 Diguanylate cyclase, GGDEF domain C5N99_03560 PF01850 PIN domain C5N99_03565 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C5N99_03580 PF01609 Transposase DDE domain C5N99_03580 PF13808 DDE_Tnp_1-associated C5N99_03595 PF03781 Sulfatase-modifying factor enzyme 1 C5N99_03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_03600 PF00672 HAMP domain C5N99_03600 PF02743 Cache domain C5N99_03605 PF00581 Rhodanese-like domain C5N99_03605 PF12368 Rhodanase C-terminal C5N99_03605 PF17773 UPF0176 acylphosphatase like domain C5N99_03610 PF00557 Metallopeptidase family M24 C5N99_03615 PF00226 DnaJ domain C5N99_03615 PF01556 DnaJ C terminal domain C5N99_03615 PF00684 DnaJ central domain C5N99_03635 PF01553 Acyltransferase C5N99_03635 PF13193 AMP-binding enzyme C-terminal domain C5N99_03635 PF00501 AMP-binding enzyme C5N99_03640 PF00550 Phosphopantetheine attachment site C5N99_03645 PF00550 Phosphopantetheine attachment site C5N99_03650 PF00501 AMP-binding enzyme C5N99_03650 PF13193 AMP-binding enzyme C-terminal domain C5N99_03670 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ C5N99_03675 PF00221 Aromatic amino acid lyase C5N99_03705 PF02801 Beta-ketoacyl synthase, C-terminal domain C5N99_03705 PF00109 Beta-ketoacyl synthase, N-terminal domain C5N99_03720 PF00109 Beta-ketoacyl synthase, N-terminal domain C5N99_03720 PF02801 Beta-ketoacyl synthase, C-terminal domain C5N99_03730 PF01522 Polysaccharide deacetylase C5N99_03735 PF00255 Glutathione peroxidase C5N99_03740 PF00817 impB/mucB/samB family C5N99_03740 PF11799 impB/mucB/samB family C-terminal domain C5N99_03740 PF11798 IMS family HHH motif C5N99_03780 PF01609 Transposase DDE domain C5N99_03780 PF13808 DDE_Tnp_1-associated C5N99_03805 PF13651 Adenine-specific methyltransferase EcoRI C5N99_03815 PF01551 Peptidase family M23 C5N99_03815 PF04225 Opacity-associated protein A LysM-like domain C5N99_03820 PF02086 D12 class N6 adenine-specific DNA methyltransferase C5N99_03830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C5N99_03830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C5N99_03830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C5N99_03830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C5N99_03845 PF01106 NifU-like domain C5N99_03850 PF00005 ABC transporter C5N99_03875 PF12833 Helix-turn-helix domain C5N99_03875 PF02311 AraC-like ligand binding domain C5N99_03880 PF14492 Elongation Factor G, domain II C5N99_03880 PF00679 Elongation factor G C-terminus C5N99_03880 PF03144 Elongation factor Tu domain 2 C5N99_03880 PF00009 Elongation factor Tu GTP binding domain C5N99_03880 PF03764 Elongation factor G, domain IV C5N99_03925 PF03787 RAMP superfamily C5N99_03935 PF03787 RAMP superfamily C5N99_03945 PF18211 Csm1 subunit domain B C5N99_03945 PF01966 HD domain C5N99_03960 PF01867 CRISPR associated protein Cas1 C5N99_03965 PF07728 AAA domain (dynein-related subfamily) C5N99_03965 PF12102 Domain of unknown function (DUF3578) C5N99_03980 PF00962 Adenosine/AMP deaminase C5N99_04010 PF01609 Transposase DDE domain C5N99_04010 PF13808 DDE_Tnp_1-associated C5N99_04030 PF03102 NeuB family C5N99_04030 PF08666 SAF domain C5N99_04035 PF02768 DNA polymerase III beta subunit, C-terminal domain C5N99_04035 PF02767 DNA polymerase III beta subunit, central domain C5N99_04035 PF00712 DNA polymerase III beta subunit, N-terminal domain C5N99_04040 PF02463 RecF/RecN/SMC N terminal domain C5N99_04065 PF01132 Elongation factor P (EF-P) OB domain C5N99_04065 PF08207 Elongation factor P (EF-P) KOW-like domain C5N99_04065 PF09285 Elongation factor P, C-terminal C5N99_04090 PF00005 ABC transporter C5N99_04110 PF13280 WYL domain C5N99_04110 PF08279 HTH domain C5N99_04120 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C5N99_04120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C5N99_04125 PF01066 CDP-alcohol phosphatidyltransferase C5N99_04145 PF01551 Peptidase family M23 C5N99_04150 PF07943 Penicillin-binding protein 5, C-terminal domain C5N99_04150 PF00768 D-alanyl-D-alanine carboxypeptidase C5N99_04155 PF04055 Radical SAM superfamily C5N99_04155 PF01938 TRAM domain C5N99_04155 PF00919 Uncharacterized protein family UPF0004 C5N99_04170 PF00144 Beta-lactamase C5N99_04175 PF00753 Metallo-beta-lactamase superfamily C5N99_04180 PF01165 Ribosomal protein S21 C5N99_04205 PF00291 Pyridoxal-phosphate dependent enzyme C5N99_04205 PF14821 Threonine synthase N terminus C5N99_04230 PF08439 Oligopeptidase F C5N99_04230 PF01432 Peptidase family M3 C5N99_04255 PF00158 Sigma-54 interaction domain C5N99_04255 PF00072 Response regulator receiver domain C5N99_04255 PF02954 Bacterial regulatory protein, Fis family C5N99_04260 PF00588 SpoU rRNA Methylase family C5N99_04275 PF00571 CBS domain C5N99_04275 PF00478 IMP dehydrogenase / GMP reductase domain C5N99_04280 PF00365 Phosphofructokinase C5N99_04290 PF03853 YjeF-related protein N-terminus C5N99_04290 PF01256 Carbohydrate kinase C5N99_04295 PF00749 tRNA synthetases class I (E and Q), catalytic domain C5N99_04300 PF03129 Anticodon binding domain C5N99_04300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C5N99_04310 PF03009 Glycerophosphoryl diester phosphodiesterase family C5N99_04375 PF00575 S1 RNA binding domain C5N99_04375 PF17674 HHH domain C5N99_04375 PF09371 Tex-like protein N-terminal domain C5N99_04375 PF16921 Tex protein YqgF-like domain C5N99_04390 PF06071 Protein of unknown function (DUF933) C5N99_04390 PF01926 50S ribosome-binding GTPase C5N99_04395 PF00183 Hsp90 protein C5N99_04400 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C5N99_04400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C5N99_04415 PF05958 tRNA (Uracil-5-)-methyltransferase C5N99_04420 PF00005 ABC transporter C5N99_04425 PF01032 FecCD transport family C5N99_04470 PF00155 Aminotransferase class I and II C5N99_04475 PF01370 NAD dependent epimerase/dehydratase family C5N99_04500 PF01467 Cytidylyltransferase-like C5N99_04505 PF01268 Formate--tetrahydrofolate ligase C5N99_04510 PF05525 Branched-chain amino acid transport protein C5N99_04515 PF00672 HAMP domain C5N99_04515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_04515 PF02743 Cache domain C5N99_04520 PF01551 Peptidase family M23 C5N99_04530 PF01121 Dephospho-CoA kinase C5N99_04550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C5N99_04550 PF14572 Phosphoribosyl synthetase-associated domain C5N99_04555 PF06123 Inner membrane protein CreD C5N99_04565 PF06874 Firmicute fructose-1,6-bisphosphatase C5N99_04570 PF02446 4-alpha-glucanotransferase C5N99_04585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C5N99_04585 PF00381 PTS HPr component phosphorylation site C5N99_04635 PF04024 PspC domain C5N99_04645 PF03551 Transcriptional regulator PadR-like family C5N99_04650 PF00005 ABC transporter C5N99_04655 PF08668 HDOD domain C5N99_04660 PF00970 Oxidoreductase FAD-binding domain C5N99_04660 PF00175 Oxidoreductase NAD-binding domain C5N99_04660 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C5N99_04665 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C5N99_04665 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5N99_04670 PF01212 Beta-eliminating lyase C5N99_04675 PF00209 Sodium:neurotransmitter symporter family C5N99_04690 PF01206 Sulfurtransferase TusA C5N99_04705 PF13407 Periplasmic binding protein domain C5N99_04720 PF13439 Glycosyltransferase Family 4 C5N99_04720 PF00534 Glycosyl transferases group 1 C5N99_04730 PF02436 Conserved carboxylase domain C5N99_04730 PF00364 Biotin-requiring enzyme C5N99_04730 PF00682 HMGL-like C5N99_04735 PF00933 Glycosyl hydrolase family 3 N terminal domain C5N99_04750 PF00881 Nitroreductase family C5N99_04755 PF13732 Domain of unknown function (DUF4162) C5N99_04755 PF00005 ABC transporter C5N99_04775 PF12002 MgsA AAA+ ATPase C terminal C5N99_04775 PF16193 AAA C-terminal domain C5N99_04775 PF00004 ATPase family associated with various cellular activities (AAA) C5N99_04785 PF13505 Outer membrane protein beta-barrel domain C5N99_04810 PF13237 4Fe-4S dicluster domain C5N99_04810 PF10531 SLBB domain C5N99_04810 PF13375 RnfC Barrel sandwich hybrid domain C5N99_04810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C5N99_04820 PF02681 Divergent PAP2 family C5N99_04825 PF08032 RNA 2'-O ribose methyltransferase substrate binding C5N99_04825 PF00588 SpoU rRNA Methylase family C5N99_04840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C5N99_04855 PF13478 XdhC Rossmann domain C5N99_04855 PF02625 XdhC and CoxI family C5N99_04875 PF00005 ABC transporter C5N99_04875 PF12848 ABC transporter C5N99_04880 PF01235 Sodium:alanine symporter family C5N99_04885 PF07687 Peptidase dimerisation domain C5N99_04885 PF01546 Peptidase family M20/M25/M40 C5N99_04890 PF00072 Response regulator receiver domain C5N99_04895 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C5N99_04900 PF05164 Cell division protein ZapA C5N99_04910 PF00453 Ribosomal protein L20 C5N99_04915 PF01632 Ribosomal protein L35 C5N99_04920 PF05198 Translation initiation factor IF-3, N-terminal domain C5N99_04920 PF00707 Translation initiation factor IF-3, C-terminal domain C5N99_04955 PF00271 Helicase conserved C-terminal domain C5N99_04955 PF18337 RapA N-terminal Tudor like domain C5N99_04955 PF18339 RapA N-terminal Tudor like domain 1 C5N99_04955 PF00176 SNF2 family N-terminal domain C5N99_04955 PF12137 RNA polymerase recycling family C-terminal C5N99_04975 PF00239 Resolvase, N terminal domain C5N99_04975 PF02796 Helix-turn-helix domain of resolvase C5N99_04985 PF00795 Carbon-nitrogen hydrolase C5N99_04995 PF04552 Sigma-54, DNA binding domain C5N99_04995 PF04963 Sigma-54 factor, core binding domain C5N99_04995 PF00309 Sigma-54 factor, Activator interacting domain (AID) C5N99_05015 PF03773 Predicted permease C5N99_05020 PF01170 Putative RNA methylase family UPF0020 C5N99_05020 PF02926 THUMP domain C5N99_05035 PF08011 PD-(D/E)XK nuclease superfamily C5N99_05035 PF09820 Predicted AAA-ATPase C5N99_05040 PF13416 Bacterial extracellular solute-binding protein C5N99_05045 PF10431 C-terminal, D2-small domain, of ClpB protein C5N99_05045 PF02861 Clp amino terminal domain, pathogenicity island component C5N99_05045 PF17871 AAA lid domain C5N99_05045 PF07724 AAA domain (Cdc48 subfamily) C5N99_05045 PF00004 ATPase family associated with various cellular activities (AAA) C5N99_05060 PF01479 S4 domain C5N99_05060 PF00849 RNA pseudouridylate synthase C5N99_05070 PF00892 EamA-like transporter family C5N99_05075 PF10417 C-terminal domain of 1-Cys peroxiredoxin C5N99_05075 PF00578 AhpC/TSA family C5N99_05095 PF03471 Transporter associated domain C5N99_05095 PF00571 CBS domain C5N99_05095 PF01595 Cyclin M transmembrane N-terminal domain C5N99_05105 PF10509 Galactokinase galactose-binding signature C5N99_05105 PF00288 GHMP kinases N terminal domain C5N99_05105 PF08544 GHMP kinases C terminal C5N99_05125 PF12728 Helix-turn-helix domain C5N99_05125 PF02661 Fic/DOC family C5N99_05140 PF11855 Protein of unknown function (DUF3375) C5N99_05145 PF02653 Branched-chain amino acid transport system / permease component C5N99_05150 PF02653 Branched-chain amino acid transport system / permease component C5N99_05155 PF00005 ABC transporter C5N99_05160 PF02608 ABC transporter substrate-binding protein PnrA-like C5N99_05170 PF08402 TOBE domain C5N99_05170 PF00005 ABC transporter C5N99_05175 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_05180 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_05205 PF00308 Bacterial dnaA protein C5N99_05205 PF11638 DnaA N-terminal domain C5N99_05205 PF08299 Bacterial dnaA protein helix-turn-helix C5N99_05210 PF00155 Aminotransferase class I and II C5N99_05220 PF02028 BCCT, betaine/carnitine/choline family transporter C5N99_05225 PF12804 MobA-like NTP transferase domain C5N99_05230 PF00005 ABC transporter C5N99_05260 PF02446 4-alpha-glucanotransferase C5N99_05270 PF00011 Hsp20/alpha crystallin family C5N99_05280 PF00258 Flavodoxin C5N99_05290 PF13185 GAF domain C5N99_05305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C5N99_05310 PF00005 ABC transporter C5N99_05340 PF12704 MacB-like periplasmic core domain C5N99_05340 PF02687 FtsX-like permease family C5N99_05350 PF12704 MacB-like periplasmic core domain C5N99_05350 PF02687 FtsX-like permease family C5N99_05350 PF00005 ABC transporter C5N99_05355 PF02743 Cache domain C5N99_05355 PF00672 HAMP domain C5N99_05355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_05390 PF00268 Ribonucleotide reductase, small chain C5N99_05395 PF01554 MatE C5N99_05400 PF00005 ABC transporter C5N99_05400 PF00664 ABC transporter transmembrane region C5N99_05405 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system C5N99_05430 PF03793 PASTA domain C5N99_05430 PF00069 Protein kinase domain C5N99_05475 PF00664 ABC transporter transmembrane region C5N99_05475 PF00005 ABC transporter C5N99_05480 PF01177 Asp/Glu/Hydantoin racemase C5N99_05485 PF03193 RsgA GTPase C5N99_05490 PF00440 Bacterial regulatory proteins, tetR family C5N99_05490 PF17932 Tetracyclin repressor-like, C-terminal domain C5N99_05495 PF00664 ABC transporter transmembrane region C5N99_05495 PF00005 ABC transporter C5N99_05500 PF00664 ABC transporter transmembrane region C5N99_05500 PF00005 ABC transporter C5N99_05505 PF00005 ABC transporter C5N99_05505 PF00664 ABC transporter transmembrane region C5N99_05510 PF00664 ABC transporter transmembrane region C5N99_05510 PF00005 ABC transporter C5N99_05515 PF00005 ABC transporter C5N99_05530 PF00005 ABC transporter C5N99_05530 PF00664 ABC transporter transmembrane region C5N99_05535 PF00664 ABC transporter transmembrane region C5N99_05535 PF00005 ABC transporter C5N99_05535 PF08021 Siderophore-interacting FAD-binding domain C5N99_05535 PF04954 Siderophore-interacting protein C5N99_05540 PF00072 Response regulator receiver domain C5N99_05540 PF12833 Helix-turn-helix domain C5N99_05555 PF00005 ABC transporter C5N99_05590 PF00664 ABC transporter transmembrane region C5N99_05590 PF00005 ABC transporter C5N99_05595 PF00664 ABC transporter transmembrane region C5N99_05595 PF00005 ABC transporter C5N99_05605 PF13533 Biotin-lipoyl like C5N99_05610 PF00873 AcrB/AcrD/AcrF family C5N99_05625 PF04536 TPM domain C5N99_05635 PF00380 Ribosomal protein S9/S16 C5N99_05640 PF00572 Ribosomal protein L13 C5N99_05655 PF01043 SecA preprotein cross-linking domain C5N99_05655 PF07517 SecA DEAD-like domain C5N99_05655 PF02810 SEC-C motif C5N99_05655 PF07516 SecA Wing and Scaffold domain C5N99_05680 PF01225 Mur ligase family, catalytic domain C5N99_05680 PF02875 Mur ligase family, glutamate ligase domain C5N99_05680 PF08245 Mur ligase middle domain C5N99_05690 PF01554 MatE C5N99_05705 PF00730 HhH-GPD superfamily base excision DNA repair protein C5N99_05725 PF02368 Bacterial Ig-like domain (group 2) C5N99_05745 PF05698 Bacterial trigger factor protein (TF) C-terminus C5N99_05745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C5N99_05745 PF05697 Bacterial trigger factor protein (TF) C5N99_05750 PF00574 Clp protease C5N99_05755 PF07724 AAA domain (Cdc48 subfamily) C5N99_05755 PF10431 C-terminal, D2-small domain, of ClpB protein C5N99_05755 PF06689 ClpX C4-type zinc finger C5N99_05765 PF02875 Mur ligase family, glutamate ligase domain C5N99_05765 PF08245 Mur ligase middle domain C5N99_05765 PF01225 Mur ligase family, catalytic domain C5N99_05770 PF02311 AraC-like ligand binding domain C5N99_05770 PF12833 Helix-turn-helix domain C5N99_05785 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_05790 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_05805 PF00440 Bacterial regulatory proteins, tetR family C5N99_05805 PF08361 MAATS-type transcriptional repressor, C-terminal region C5N99_05820 PF00005 ABC transporter C5N99_05845 PF12146 Serine aminopeptidase, S33 C5N99_05860 PF00679 Elongation factor G C-terminus C5N99_05860 PF14492 Elongation Factor G, domain II C5N99_05860 PF00009 Elongation factor Tu GTP binding domain C5N99_05860 PF03144 Elongation factor Tu domain 2 C5N99_05860 PF06421 GTP-binding protein LepA C-terminus C5N99_05875 PF00750 tRNA synthetases class I (R) C5N99_05875 PF03485 Arginyl tRNA synthetase N terminal domain C5N99_05875 PF05746 DALR anticodon binding domain C5N99_05885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C5N99_05885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C5N99_05890 PF00696 Amino acid kinase family C5N99_05895 PF03606 C4-dicarboxylate anaerobic carrier C5N99_05905 PF02875 Mur ligase family, glutamate ligase domain C5N99_05905 PF08245 Mur ligase middle domain C5N99_05935 PF00156 Phosphoribosyl transferase domain C5N99_05940 PF01336 OB-fold nucleic acid binding domain C5N99_05940 PF00152 tRNA synthetases class II (D, K and N) C5N99_05955 PF01638 HxlR-like helix-turn-helix C5N99_05980 PF04324 BFD-like [2Fe-2S] binding domain C5N99_05980 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5N99_05985 PF01266 FAD dependent oxidoreductase C5N99_05990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C5N99_05990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C5N99_06005 PF00085 Thioredoxin C5N99_06010 PF13277 YmdB-like protein C5N99_06015 PF00266 Aminotransferase class-V C5N99_06025 PF01458 Uncharacterized protein family (UPF0051) C5N99_06030 PF00005 ABC transporter C5N99_06040 PF01264 Chorismate synthase C5N99_06055 PF13742 OB-fold nucleic acid binding domain C5N99_06055 PF02601 Exonuclease VII, large subunit C5N99_06065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C5N99_06065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C5N99_06075 PF02608 ABC transporter substrate-binding protein PnrA-like C5N99_06080 PF00005 ABC transporter C5N99_06090 PF02653 Branched-chain amino acid transport system / permease component C5N99_06095 PF01156 Inosine-uridine preferring nucleoside hydrolase C5N99_06100 PF00294 pfkB family carbohydrate kinase C5N99_06105 PF00294 pfkB family carbohydrate kinase C5N99_06115 PF00270 DEAD/DEAH box helicase C5N99_06115 PF17191 RecG wedge domain C5N99_06115 PF00271 Helicase conserved C-terminal domain C5N99_06130 PF18610 Periplasmic binding protein domain C5N99_06130 PF13407 Periplasmic binding protein domain C5N99_06135 PF00005 ABC transporter C5N99_06140 PF02653 Branched-chain amino acid transport system / permease component C5N99_06160 PF00440 Bacterial regulatory proteins, tetR family C5N99_06160 PF08359 YsiA-like protein, C-terminal region C5N99_06165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C5N99_06165 PF00391 PEP-utilising enzyme, mobile domain C5N99_06170 PF01554 MatE C5N99_06175 PF00924 Mechanosensitive ion channel C5N99_06180 PF11756 Nitrous oxide-stimulated promoter C5N99_06185 PF00152 tRNA synthetases class II (D, K and N) C5N99_06185 PF02938 GAD domain C5N99_06185 PF01336 OB-fold nucleic acid binding domain C5N99_06190 PF00152 tRNA synthetases class II (D, K and N) C5N99_06225 PF12072 Domain of unknown function (DUF3552) C5N99_06225 PF01966 HD domain C5N99_06225 PF00013 KH domain C5N99_06235 PF01252 Signal peptidase (SPase) II C5N99_06260 PF00293 NUDIX domain C5N99_06275 PF10502 Signal peptidase, peptidase S26 C5N99_06280 PF00905 Penicillin binding protein transpeptidase domain C5N99_06280 PF03717 Penicillin-binding Protein dimerisation domain C5N99_06280 PF03793 PASTA domain C5N99_06295 PF00072 Response regulator receiver domain C5N99_06305 PF00700 Bacterial flagellin C-terminal helical region C5N99_06305 PF00669 Bacterial flagellin N-terminal helical region C5N99_06325 PF00708 Acylphosphatase C5N99_06340 PF00293 NUDIX domain C5N99_06340 PF09297 NADH pyrophosphatase zinc ribbon domain C5N99_06340 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C5N99_06350 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C5N99_06355 PF02504 Fatty acid synthesis protein C5N99_06360 PF07238 PilZ domain C5N99_06370 PF01820 D-ala D-ala ligase N-terminus C5N99_06370 PF07478 D-ala D-ala ligase C-terminus C5N99_06375 PF02554 Carbon starvation protein CstA C5N99_06380 PF02661 Fic/DOC family C5N99_06385 PF01420 Type I restriction modification DNA specificity domain C5N99_06390 PF01420 Type I restriction modification DNA specificity domain C5N99_06410 PF12161 HsdM N-terminal domain C5N99_06410 PF02384 N-6 DNA Methylase C5N99_06415 PF12161 HsdM N-terminal domain C5N99_06415 PF02384 N-6 DNA Methylase C5N99_06435 PF01979 Amidohydrolase family C5N99_06440 PF13382 Adenine deaminase C-terminal domain C5N99_06440 PF01979 Amidohydrolase family C5N99_06445 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C5N99_06445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C5N99_06450 PF00941 FAD binding domain in molybdopterin dehydrogenase C5N99_06450 PF03450 CO dehydrogenase flavoprotein C-terminal domain C5N99_06455 PF01799 [2Fe-2S] binding domain C5N99_06455 PF00111 2Fe-2S iron-sulfur cluster binding domain C5N99_06465 PF16325 Peptidase family U32 C-terminal domain C5N99_06465 PF01136 Peptidase family U32 C5N99_06470 PF07859 alpha/beta hydrolase fold C5N99_06475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5N99_06480 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_06485 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_06485 PF12911 N-terminal TM domain of oligopeptide transport permease C C5N99_06490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5N99_06490 PF00005 ABC transporter C5N99_06495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5N99_06495 PF00005 ABC transporter C5N99_06500 PF01343 Peptidase family S49 C5N99_06520 PF08281 Sigma-70, region 4 C5N99_06520 PF04542 Sigma-70 region 2 C5N99_06530 PF00005 ABC transporter C5N99_06560 PF00830 Ribosomal L28 family C5N99_06575 PF02272 DHHA1 domain C5N99_06575 PF01368 DHH family C5N99_06585 PF00849 RNA pseudouridylate synthase C5N99_06585 PF01479 S4 domain C5N99_06590 PF02547 Queuosine biosynthesis protein C5N99_06595 PF01316 Arginine repressor, DNA binding domain C5N99_06595 PF02863 Arginine repressor, C-terminal domain C5N99_06610 PF03781 Sulfatase-modifying factor enzyme 1 C5N99_06630 PF00471 Ribosomal protein L33 C5N99_06640 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C5N99_06645 PF02357 Transcription termination factor nusG C5N99_06645 PF00467 KOW motif C5N99_06650 PF03946 Ribosomal protein L11, N-terminal domain C5N99_06650 PF00298 Ribosomal protein L11, RNA binding domain C5N99_06655 PF00687 Ribosomal protein L1p/L10e family C5N99_06660 PF00466 Ribosomal protein L10 C5N99_06665 PF16320 Ribosomal protein L7/L12 dimerisation domain C5N99_06665 PF00542 Ribosomal protein L7/L12 C-terminal domain C5N99_06670 PF00562 RNA polymerase Rpb2, domain 6 C5N99_06670 PF04561 RNA polymerase Rpb2, domain 2 C5N99_06670 PF04565 RNA polymerase Rpb2, domain 3 C5N99_06670 PF10385 RNA polymerase beta subunit external 1 domain C5N99_06670 PF04563 RNA polymerase beta subunit C5N99_06670 PF04560 RNA polymerase Rpb2, domain 7 C5N99_06675 PF00623 RNA polymerase Rpb1, domain 2 C5N99_06675 PF05000 RNA polymerase Rpb1, domain 4 C5N99_06675 PF04983 RNA polymerase Rpb1, domain 3 C5N99_06675 PF04997 RNA polymerase Rpb1, domain 1 C5N99_06675 PF04998 RNA polymerase Rpb1, domain 5 C5N99_06680 PF00164 Ribosomal protein S12/S23 C5N99_06685 PF00177 Ribosomal protein S7p/S5e C5N99_06700 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5N99_06705 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5N99_06710 PF03120 NAD-dependent DNA ligase OB-fold domain C5N99_06710 PF01653 NAD-dependent DNA ligase adenylation domain C5N99_06710 PF00533 BRCA1 C Terminus (BRCT) domain C5N99_06720 PF01709 Transcriptional regulator C5N99_06730 PF01609 Transposase DDE domain C5N99_06730 PF13808 DDE_Tnp_1-associated C5N99_06760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C5N99_06760 PF14579 Helix-hairpin-helix motif C5N99_06760 PF02811 PHP domain C5N99_06760 PF07733 Bacterial DNA polymerase III alpha NTPase domain C5N99_06775 PF02325 YGGT family C5N99_06785 PF01048 Phosphorylase superfamily C5N99_06790 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C5N99_06795 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C5N99_06795 PF08501 Shikimate dehydrogenase substrate binding domain C5N99_06805 PF09338 Glycine/sarcosine/betaine reductase component B subunits C5N99_06815 PF00474 Sodium:solute symporter family C5N99_06840 PF04468 PSP1 C-terminal conserved region C5N99_06855 PF01551 Peptidase family M23 C5N99_06855 PF04225 Opacity-associated protein A LysM-like domain C5N99_06865 PF02223 Thymidylate kinase C5N99_06875 PF01103 Surface antigen C5N99_06875 PF07244 Surface antigen variable number repeat C5N99_06885 PF05188 MutS domain II C5N99_06885 PF01624 MutS domain I C5N99_06885 PF00488 MutS domain V C5N99_06885 PF05192 MutS domain III C5N99_06885 PF05190 MutS family domain IV C5N99_06890 PF13187 4Fe-4S dicluster domain C5N99_06900 PF04225 Opacity-associated protein A LysM-like domain C5N99_06900 PF01551 Peptidase family M23 C5N99_06930 PF03590 Aspartate-ammonia ligase C5N99_06940 PF02926 THUMP domain C5N99_06940 PF02568 Thiamine biosynthesis protein (ThiI) C5N99_06965 PF08459 UvrC Helix-hairpin-helix N-terminal C5N99_06965 PF02151 UvrB/uvrC motif C5N99_06965 PF01541 GIY-YIG catalytic domain C5N99_07000 PF00483 Nucleotidyl transferase C5N99_07020 PF00072 Response regulator receiver domain C5N99_07030 PF00700 Bacterial flagellin C-terminal helical region C5N99_07030 PF00669 Bacterial flagellin N-terminal helical region C5N99_07050 PF00708 Acylphosphatase C5N99_07065 PF00293 NUDIX domain C5N99_07065 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C5N99_07065 PF09297 NADH pyrophosphatase zinc ribbon domain C5N99_07075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C5N99_07080 PF02504 Fatty acid synthesis protein C5N99_07085 PF07238 PilZ domain C5N99_07095 PF07478 D-ala D-ala ligase C-terminus C5N99_07095 PF01820 D-ala D-ala ligase N-terminus C5N99_07100 PF02554 Carbon starvation protein CstA C5N99_07105 PF02661 Fic/DOC family C5N99_07110 PF01420 Type I restriction modification DNA specificity domain C5N99_07115 PF01420 Type I restriction modification DNA specificity domain C5N99_07135 PF12161 HsdM N-terminal domain C5N99_07135 PF02384 N-6 DNA Methylase C5N99_07140 PF02384 N-6 DNA Methylase C5N99_07140 PF12161 HsdM N-terminal domain C5N99_07160 PF01979 Amidohydrolase family C5N99_07165 PF13382 Adenine deaminase C-terminal domain C5N99_07165 PF01979 Amidohydrolase family C5N99_07170 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C5N99_07170 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C5N99_07175 PF00941 FAD binding domain in molybdopterin dehydrogenase C5N99_07175 PF03450 CO dehydrogenase flavoprotein C-terminal domain C5N99_07180 PF01799 [2Fe-2S] binding domain C5N99_07180 PF00111 2Fe-2S iron-sulfur cluster binding domain C5N99_07190 PF16325 Peptidase family U32 C-terminal domain C5N99_07190 PF01136 Peptidase family U32 C5N99_07195 PF07859 alpha/beta hydrolase fold C5N99_07200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5N99_07205 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_07210 PF12911 N-terminal TM domain of oligopeptide transport permease C C5N99_07210 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_07215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5N99_07215 PF00005 ABC transporter C5N99_07220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5N99_07220 PF00005 ABC transporter C5N99_07225 PF01343 Peptidase family S49 C5N99_07245 PF04542 Sigma-70 region 2 C5N99_07245 PF08281 Sigma-70, region 4 C5N99_07255 PF00005 ABC transporter C5N99_07285 PF00830 Ribosomal L28 family C5N99_07295 PF02547 Queuosine biosynthesis protein C5N99_07300 PF00849 RNA pseudouridylate synthase C5N99_07300 PF01479 S4 domain C5N99_07310 PF02272 DHHA1 domain C5N99_07310 PF01368 DHH family C5N99_07315 PF02863 Arginine repressor, C-terminal domain C5N99_07315 PF01316 Arginine repressor, DNA binding domain C5N99_07330 PF03781 Sulfatase-modifying factor enzyme 1 C5N99_07350 PF00471 Ribosomal protein L33 C5N99_07360 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C5N99_07365 PF00467 KOW motif C5N99_07365 PF02357 Transcription termination factor nusG C5N99_07370 PF00298 Ribosomal protein L11, RNA binding domain C5N99_07370 PF03946 Ribosomal protein L11, N-terminal domain C5N99_07375 PF00687 Ribosomal protein L1p/L10e family C5N99_07380 PF00466 Ribosomal protein L10 C5N99_07385 PF16320 Ribosomal protein L7/L12 dimerisation domain C5N99_07385 PF00542 Ribosomal protein L7/L12 C-terminal domain C5N99_07390 PF10385 RNA polymerase beta subunit external 1 domain C5N99_07390 PF00562 RNA polymerase Rpb2, domain 6 C5N99_07390 PF04560 RNA polymerase Rpb2, domain 7 C5N99_07390 PF04565 RNA polymerase Rpb2, domain 3 C5N99_07390 PF04563 RNA polymerase beta subunit C5N99_07390 PF04561 RNA polymerase Rpb2, domain 2 C5N99_07395 PF04998 RNA polymerase Rpb1, domain 5 C5N99_07395 PF00623 RNA polymerase Rpb1, domain 2 C5N99_07395 PF04983 RNA polymerase Rpb1, domain 3 C5N99_07395 PF04997 RNA polymerase Rpb1, domain 1 C5N99_07395 PF05000 RNA polymerase Rpb1, domain 4 C5N99_07400 PF00164 Ribosomal protein S12/S23 C5N99_07405 PF00177 Ribosomal protein S7p/S5e C5N99_07420 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5N99_07425 PF00497 Bacterial extracellular solute-binding proteins, family 3 C5N99_07430 PF03120 NAD-dependent DNA ligase OB-fold domain C5N99_07430 PF01653 NAD-dependent DNA ligase adenylation domain C5N99_07430 PF00533 BRCA1 C Terminus (BRCT) domain C5N99_07440 PF01709 Transcriptional regulator C5N99_07450 PF01609 Transposase DDE domain C5N99_07450 PF13808 DDE_Tnp_1-associated C5N99_07480 PF14579 Helix-hairpin-helix motif C5N99_07480 PF07733 Bacterial DNA polymerase III alpha NTPase domain C5N99_07480 PF02811 PHP domain C5N99_07480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C5N99_07495 PF02325 YGGT family C5N99_07505 PF01048 Phosphorylase superfamily C5N99_07510 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C5N99_07515 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C5N99_07515 PF08501 Shikimate dehydrogenase substrate binding domain C5N99_07525 PF09338 Glycine/sarcosine/betaine reductase component B subunits C5N99_07535 PF00474 Sodium:solute symporter family C5N99_07560 PF04468 PSP1 C-terminal conserved region C5N99_07575 PF01551 Peptidase family M23 C5N99_07575 PF04225 Opacity-associated protein A LysM-like domain C5N99_07585 PF02223 Thymidylate kinase C5N99_07595 PF01103 Surface antigen C5N99_07595 PF07244 Surface antigen variable number repeat C5N99_07605 PF05188 MutS domain II C5N99_07605 PF01624 MutS domain I C5N99_07605 PF05192 MutS domain III C5N99_07605 PF00488 MutS domain V C5N99_07605 PF05190 MutS family domain IV C5N99_07610 PF13187 4Fe-4S dicluster domain C5N99_07620 PF01551 Peptidase family M23 C5N99_07620 PF04225 Opacity-associated protein A LysM-like domain C5N99_07650 PF03590 Aspartate-ammonia ligase C5N99_07660 PF02568 Thiamine biosynthesis protein (ThiI) C5N99_07660 PF02926 THUMP domain C5N99_07685 PF08459 UvrC Helix-hairpin-helix N-terminal C5N99_07685 PF02151 UvrB/uvrC motif C5N99_07685 PF01541 GIY-YIG catalytic domain C5N99_07720 PF00483 Nucleotidyl transferase C5N99_07755 PF00005 ABC transporter C5N99_07755 PF12848 ABC transporter C5N99_07755 PF16326 ABC transporter C-terminal domain C5N99_07760 PF09820 Predicted AAA-ATPase C5N99_07760 PF08011 PD-(D/E)XK nuclease superfamily C5N99_07765 PF02677 Epoxyqueuosine reductase QueH C5N99_07785 PF01979 Amidohydrolase family C5N99_07790 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C5N99_07795 PF01594 AI-2E family transporter C5N99_07800 PF00793 DAHP synthetase I family C5N99_07805 PF00075 RNase H C5N99_07810 PF02146 Sir2 family C5N99_07820 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_07825 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_07830 PF07171 MlrC C-terminus C5N99_07830 PF07364 Metallopeptidase family M81 C5N99_07870 PF05683 Fumarase C-terminus C5N99_07870 PF05681 Fumarate hydratase (Fumerase) C5N99_07880 PF16124 RecQ zinc-binding C5N99_07880 PF00270 DEAD/DEAH box helicase C5N99_07880 PF09382 RQC domain C5N99_07880 PF00271 Helicase conserved C-terminal domain C5N99_07880 PF00570 HRDC domain C5N99_07890 PF01381 Helix-turn-helix C5N99_07890 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system C5N99_07905 PF02872 5'-nucleotidase, C-terminal domain C5N99_07905 PF17936 Bacterial Ig domain C5N99_07905 PF00149 Calcineurin-like phosphoesterase C5N99_07910 PF00501 AMP-binding enzyme C5N99_07915 PF01230 HIT domain C5N99_07920 PF00288 GHMP kinases N terminal domain C5N99_07920 PF08544 GHMP kinases C terminal C5N99_07925 PF04026 SpoVG C5N99_07935 PF01386 Ribosomal L25p family C5N99_07935 PF14693 Ribosomal protein TL5, C-terminal domain C5N99_07940 PF01171 PP-loop family C5N99_07950 PF13180 PDZ domain C5N99_07955 PF01641 SelR domain C5N99_07955 PF01625 Peptide methionine sulfoxide reductase C5N99_07965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_07965 PF00672 HAMP domain C5N99_07975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C5N99_07975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C5N99_07980 PF03616 Sodium/glutamate symporter C5N99_07990 PF00364 Biotin-requiring enzyme C5N99_07995 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C5N99_08000 PF01144 Coenzyme A transferase C5N99_08005 PF01144 Coenzyme A transferase C5N99_08010 PF01039 Carboxyl transferase domain C5N99_08020 PF01869 BadF/BadG/BcrA/BcrD ATPase family C5N99_08025 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component C5N99_08030 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component C5N99_08040 PF01475 Ferric uptake regulator family C5N99_08055 PF00293 NUDIX domain C5N99_08070 PF00210 Ferritin-like domain C5N99_08075 PF02562 PhoH-like protein C5N99_08080 PF07697 7TM-HD extracellular C5N99_08080 PF01966 HD domain C5N99_08080 PF07698 7TM receptor with intracellular HD hydrolase C5N99_08085 PF02130 Uncharacterized protein family UPF0054 C5N99_08090 PF00571 CBS domain C5N99_08090 PF03471 Transporter associated domain C5N99_08100 PF04002 RadC-like JAB domain C5N99_08105 PF12695 Alpha/beta hydrolase family C5N99_08115 PF01613 Flavin reductase like domain C5N99_08115 PF00753 Metallo-beta-lactamase superfamily C5N99_08120 PF01588 Putative tRNA binding domain C5N99_08130 PF13193 AMP-binding enzyme C-terminal domain C5N99_08130 PF00501 AMP-binding enzyme C5N99_08135 PF02690 Na+/Pi-cotransporter C5N99_08140 PF02896 PEP-utilising enzyme, TIM barrel domain C5N99_08140 PF00391 PEP-utilising enzyme, mobile domain C5N99_08140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C5N99_08160 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system C5N99_08170 PF17676 LD-carboxypeptidase C-terminal domain C5N99_08170 PF02016 LD-carboxypeptidase N-terminal domain C5N99_08200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C5N99_08200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C5N99_08200 PF03129 Anticodon binding domain C5N99_08210 PF00162 Phosphoglycerate kinase C5N99_08245 PF17239 Family of unknown function (DUF5312) C5N99_08250 PF03705 CheR methyltransferase, all-alpha domain C5N99_08250 PF01739 CheR methyltransferase, SAM binding domain C5N99_08255 PF01339 CheB methylesterase C5N99_08255 PF00072 Response regulator receiver domain C5N99_08270 PF13545 Crp-like helix-turn-helix domain C5N99_08270 PF00027 Cyclic nucleotide-binding domain C5N99_08275 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C5N99_08275 PF01565 FAD binding domain C5N99_08280 PF01406 tRNA synthetases class I (C) catalytic domain C5N99_08280 PF09190 DALR domain C5N99_08285 PF04542 Sigma-70 region 2 C5N99_08285 PF04539 Sigma-70 region 3 C5N99_08285 PF04545 Sigma-70, region 4 C5N99_08295 PF01841 Transglutaminase-like superfamily C5N99_08300 PF00696 Amino acid kinase family C5N99_08305 PF00684 DnaJ central domain C5N99_08305 PF01556 DnaJ C terminal domain C5N99_08305 PF00226 DnaJ domain C5N99_08310 PF01176 Translation initiation factor 1A / IF-1 C5N99_08335 PF00834 Ribulose-phosphate 3 epimerase family C5N99_08350 PF13176 Tetratricopeptide repeat C5N99_08350 PF00515 Tetratricopeptide repeat C5N99_08355 PF04551 GcpE protein C5N99_08365 PF02540 NAD synthase C5N99_08405 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_08410 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_08415 PF01547 Bacterial extracellular solute-binding protein C5N99_08430 PF13580 SIS domain C5N99_08435 PF01869 BadF/BadG/BcrA/BcrD ATPase family C5N99_08445 PF03167 Uracil DNA glycosylase superfamily C5N99_08450 PF00270 DEAD/DEAH box helicase C5N99_08450 PF00271 Helicase conserved C-terminal domain C5N99_08450 PF17764 3′ DNA-binding domain (3′BD) C5N99_08450 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C5N99_08450 PF18074 Primosomal protein N C-terminal domain C5N99_08455 PF01238 Phosphomannose isomerase type I C5N99_08465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C5N99_08480 PF00849 RNA pseudouridylate synthase C5N99_08480 PF01479 S4 domain C5N99_08485 PF04079 Segregation and condensation complex subunit ScpB C5N99_08490 PF02616 Segregation and condensation protein ScpA C5N99_08500 PF01227 GTP cyclohydrolase I C5N99_08500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C5N99_08510 PF00465 Iron-containing alcohol dehydrogenase C5N99_08520 PF03477 ATP cone domain C5N99_08530 PF01790 Prolipoprotein diacylglyceryl transferase C5N99_08540 PF10609 NUBPL iron-transfer P-loop NTPase C5N99_08550 PF01618 MotA/TolQ/ExbB proton channel family C5N99_08555 PF02472 Biopolymer transport protein ExbD/TolR C5N99_08580 PF01381 Helix-turn-helix C5N99_08590 PF00082 Subtilase family C5N99_08605 PF00593 TonB dependent receptor C5N99_08605 PF07715 TonB-dependent Receptor Plug Domain C5N99_08610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C5N99_08610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C5N99_08615 PF00521 DNA gyrase/topoisomerase IV, subunit A C5N99_08615 PF03989 DNA gyrase C-terminal domain, beta-propeller C5N99_08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5N99_08620 PF01751 Toprim domain C5N99_08620 PF00204 DNA gyrase B C5N99_08620 PF00986 DNA gyrase B subunit, carboxyl terminus C5N99_08630 PF09820 Predicted AAA-ATPase C5N99_08630 PF08011 PD-(D/E)XK nuclease superfamily C5N99_08660 PF01661 Macro domain C5N99_08675 PF03963 Flagellar hook capping protein - N-terminal region C5N99_08680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5N99_08680 PF00460 Flagella basal body rod protein C5N99_08680 PF07559 Flagellar basal body protein FlaE C5N99_08690 PF01618 MotA/TolQ/ExbB proton channel family C5N99_08695 PF00691 OmpA family C5N99_08695 PF13677 Membrane MotB of proton-channel complex MotA/MotB C5N99_08700 PF03748 Flagellar basal body-associated protein FliL C5N99_08705 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C5N99_08705 PF02154 Flagellar motor switch protein FliM C5N99_08710 PF04509 CheC-like family C5N99_08710 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C5N99_08720 PF00813 FliP family C5N99_08725 PF01313 Bacterial export proteins, family 3 C5N99_08730 PF01311 Bacterial export proteins, family 1 C5N99_08735 PF01312 FlhB HrpN YscU SpaS Family C5N99_08740 PF00771 FHIPEP family C5N99_08745 PF00448 SRP54-type protein, GTPase domain C5N99_08750 PF10609 NUBPL iron-transfer P-loop NTPase C5N99_08755 PF01554 MatE C5N99_08765 PF00773 RNB domain C5N99_08770 PF13784 Fic/DOC family N-terminal C5N99_08770 PF02661 Fic/DOC family C5N99_08775 PF02127 Aminopeptidase I zinc metalloprotease (M18) C5N99_08785 PF13478 XdhC Rossmann domain C5N99_08785 PF02625 XdhC and CoxI family C5N99_08790 PF10458 Valyl tRNA synthetase tRNA binding arm C5N99_08790 PF08264 Anticodon-binding domain of tRNA C5N99_08790 PF00133 tRNA synthetases class I (I, L, M and V) C5N99_08830 PF01300 Telomere recombination C5N99_08835 PF00589 Phage integrase family C5N99_08835 PF02899 Phage integrase, N-terminal SAM-like domain C5N99_08840 PF01751 Toprim domain C5N99_08840 PF01131 DNA topoisomerase C5N99_08840 PF01396 Topoisomerase DNA binding C4 zinc finger C5N99_08845 PF17782 DprA winged helix domain C5N99_08845 PF02481 DNA recombination-mediator protein A C5N99_08855 PF00999 Sodium/hydrogen exchanger family C5N99_08865 PF03051 Peptidase C1-like family C5N99_08880 PF01926 50S ribosome-binding GTPase C5N99_08885 PF00342 Phosphoglucose isomerase C5N99_08890 PF00953 Glycosyl transferase family 4 C5N99_08895 PF00291 Pyridoxal-phosphate dependent enzyme C5N99_08930 PF00753 Metallo-beta-lactamase superfamily C5N99_08930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C5N99_08930 PF10996 Beta-Casp domain C5N99_08935 PF00588 SpoU rRNA Methylase family C5N99_08935 PF08032 RNA 2'-O ribose methyltransferase substrate binding C5N99_08940 PF08032 RNA 2'-O ribose methyltransferase substrate binding C5N99_08940 PF00588 SpoU rRNA Methylase family C5N99_08945 PF00391 PEP-utilising enzyme, mobile domain C5N99_08945 PF02896 PEP-utilising enzyme, TIM barrel domain C5N99_08960 PF13519 von Willebrand factor type A domain C5N99_08965 PF18663 Pallilysin beta barrel domain C5N99_08970 PF00108 Thiolase, N-terminal domain C5N99_08970 PF02803 Thiolase, C-terminal domain C5N99_08985 PF09334 tRNA synthetases class I (M) C5N99_08985 PF01588 Putative tRNA binding domain C5N99_08995 PF00163 Ribosomal protein S4/S9 N-terminal domain C5N99_08995 PF01479 S4 domain C5N99_09000 PF00301 Rubredoxin C5N99_09010 PF13603 Leucyl-tRNA synthetase, Domain 2 C5N99_09010 PF00133 tRNA synthetases class I (I, L, M and V) C5N99_09010 PF09334 tRNA synthetases class I (M) C5N99_09010 PF08264 Anticodon-binding domain of tRNA C5N99_09030 PF02021 Uncharacterised protein family UPF0102 C5N99_09035 PF00072 Response regulator receiver domain C5N99_09050 PF01245 Ribosomal protein L19 C5N99_09055 PF01746 tRNA (Guanine-1)-methyltransferase C5N99_09060 PF01782 RimM N-terminal domain C5N99_09070 PF00886 Ribosomal protein S16 C5N99_09100 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_09105 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_09120 PF02837 Glycosyl hydrolases family 2, sugar binding domain C5N99_09120 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C5N99_09120 PF00703 Glycosyl hydrolases family 2 C5N99_09120 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C5N99_09130 PF00905 Penicillin binding protein transpeptidase domain C5N99_09130 PF00912 Transglycosylase C5N99_09160 PF08011 PD-(D/E)XK nuclease superfamily C5N99_09160 PF09820 Predicted AAA-ATPase C5N99_09165 PF01835 MG2 domain C5N99_09165 PF17962 Bacterial macroglobulin domain 6 C5N99_09165 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain C5N99_09165 PF11974 Bacterial alpha-2-macroglobulin MG3 domain C5N99_09165 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain C5N99_09165 PF00207 Alpha-2-macroglobulin family C5N99_09175 PF00578 AhpC/TSA family C5N99_09180 PF02683 Cytochrome C biogenesis protein transmembrane region C5N99_09185 PF03466 LysR substrate binding domain C5N99_09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C5N99_09190 PF08239 Bacterial SH3 domain C5N99_09190 PF00877 NlpC/P60 family C5N99_09190 PF01476 LysM domain C5N99_09195 PF10417 C-terminal domain of 1-Cys peroxiredoxin C5N99_09195 PF00578 AhpC/TSA family C5N99_09210 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C5N99_09220 PF00691 OmpA family C5N99_09225 PF00899 ThiF family C5N99_09235 PF02075 Crossover junction endodeoxyribonuclease RuvC C5N99_09245 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C5N99_09260 PF00117 Glutamine amidotransferase class-I C5N99_09260 PF00958 GMP synthase C terminal domain C5N99_09260 PF02540 NAD synthase C5N99_09265 PF12169 DNA polymerase III subunits gamma and tau domain III C5N99_09265 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C5N99_09265 PF12170 DNA polymerase III tau subunit V interacting with alpha C5N99_09275 PF02575 YbaB/EbfC DNA-binding family C5N99_09280 PF02132 RecR protein C5N99_09280 PF13662 Toprim domain C5N99_09295 PF00941 FAD binding domain in molybdopterin dehydrogenase C5N99_09305 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C5N99_09305 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C5N99_09310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C5N99_09315 PF00795 Carbon-nitrogen hydrolase C5N99_09320 PF10509 Galactokinase galactose-binding signature C5N99_09320 PF08544 GHMP kinases C terminal C5N99_09335 PF01037 Lrp/AsnC ligand binding domain C5N99_09340 PF00155 Aminotransferase class I and II C5N99_09350 PF00005 ABC transporter C5N99_09350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5N99_09355 PF00005 ABC transporter C5N99_09355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5N99_09360 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_09365 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_09370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5N99_09395 PF02557 D-alanyl-D-alanine carboxypeptidase C5N99_09400 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5N99_09400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C5N99_09410 PF02632 BioY family C5N99_09415 PF00005 ABC transporter C5N99_09440 PF02881 SRP54-type protein, helical bundle domain C5N99_09440 PF00448 SRP54-type protein, GTPase domain C5N99_09450 PF12704 MacB-like periplasmic core domain C5N99_09450 PF02687 FtsX-like permease family C5N99_09455 PF00005 ABC transporter C5N99_09465 PF00348 Polyprenyl synthetase C5N99_09470 PF01728 FtsJ-like methyltransferase C5N99_09475 PF03144 Elongation factor Tu domain 2 C5N99_09475 PF14492 Elongation Factor G, domain II C5N99_09475 PF00679 Elongation factor G C-terminus C5N99_09475 PF03764 Elongation factor G, domain IV C5N99_09475 PF00009 Elongation factor Tu GTP binding domain C5N99_09695 PF01966 HD domain C5N99_09750 PF13335 Magnesium chelatase, subunit ChlI C-terminal C5N99_09750 PF01078 Magnesium chelatase, subunit ChlI C5N99_09760 PF03880 DbpA RNA binding domain C5N99_09765 PF13525 Outer membrane lipoprotein C5N99_09775 PF06470 SMC proteins Flexible Hinge Domain C5N99_09775 PF02463 RecF/RecN/SMC N terminal domain C5N99_09780 PF06418 CTP synthase N-terminus C5N99_09780 PF00117 Glutamine amidotransferase class-I C5N99_09790 PF01145 SPFH domain / Band 7 family C5N99_09820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C5N99_09825 PF00209 Sodium:neurotransmitter symporter family C5N99_09830 PF01367 5'-3' exonuclease, C-terminal SAM fold C5N99_09830 PF01612 3'-5' exonuclease C5N99_09830 PF00476 DNA polymerase family A C5N99_09830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C5N99_09845 PF02368 Bacterial Ig-like domain (group 2) C5N99_09855 PF05670 NFACT protein RNA binding domain C5N99_09860 PF08402 TOBE domain C5N99_09860 PF00005 ABC transporter C5N99_09865 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_09870 PF01547 Bacterial extracellular solute-binding protein C5N99_09910 PF01554 MatE C5N99_09915 PF03806 AbgT putative transporter family C5N99_09930 PF02527 rRNA small subunit methyltransferase G C5N99_09935 PF02237 Biotin protein ligase C terminal domain C5N99_09935 PF03099 Biotin/lipoate A/B protein ligase family C5N99_09940 PF00929 Exonuclease C5N99_09945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C5N99_09945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C5N99_09945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C5N99_09945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C5N99_09950 PF17092 Penicillin-binding protein OB-like domain C5N99_09950 PF00912 Transglycosylase C5N99_09950 PF00905 Penicillin binding protein transpeptidase domain C5N99_09960 PF03372 Endonuclease/Exonuclease/phosphatase family C5N99_09995 PF03819 MazG nucleotide pyrophosphohydrolase domain C5N99_09995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C5N99_10005 PF00809 Pterin binding enzyme C5N99_10010 PF02457 DisA bacterial checkpoint controller nucleotide-binding C5N99_10020 PF01648 4'-phosphopantetheinyl transferase superfamily C5N99_10025 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) C5N99_10030 PF01416 tRNA pseudouridine synthase C5N99_10040 PF04011 LemA family C5N99_10050 PF00664 ABC transporter transmembrane region C5N99_10050 PF00005 ABC transporter C5N99_10055 PF00664 ABC transporter transmembrane region C5N99_10055 PF08021 Siderophore-interacting FAD-binding domain C5N99_10055 PF04954 Siderophore-interacting protein C5N99_10055 PF00005 ABC transporter C5N99_10060 PF00440 Bacterial regulatory proteins, tetR family C5N99_10060 PF08361 MAATS-type transcriptional repressor, C-terminal region C5N99_10065 PF00664 ABC transporter transmembrane region C5N99_10065 PF00005 ABC transporter C5N99_10070 PF00005 ABC transporter C5N99_10070 PF00664 ABC transporter transmembrane region C5N99_10075 PF00392 Bacterial regulatory proteins, gntR family C5N99_10075 PF07729 FCD domain C5N99_10080 PF07729 FCD domain C5N99_10080 PF00392 Bacterial regulatory proteins, gntR family C5N99_10085 PF01330 RuvA N terminal domain C5N99_10090 PF01205 Uncharacterized protein family UPF0029 C5N99_10090 PF09186 Domain of unknown function (DUF1949) C5N99_10095 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C5N99_10095 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C5N99_10100 PF03033 Glycosyltransferase family 28 N-terminal domain C5N99_10100 PF04101 Glycosyltransferase family 28 C-terminal domain C5N99_10110 PF09115 DNA polymerase III, delta subunit, C terminal C5N99_10120 PF01973 Protein of unknown function DUF115 C5N99_10135 PF01192 RNA polymerase Rpb6 C5N99_10145 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C5N99_10150 PF00317 Ribonucleotide reductase, all-alpha domain C5N99_10150 PF03477 ATP cone domain C5N99_10150 PF02867 Ribonucleotide reductase, barrel domain C5N99_10185 PF01425 Amidase C5N99_10190 PF02934 GatB/GatE catalytic domain C5N99_10190 PF02637 GatB domain C5N99_10200 PF04773 FecR protein C5N99_10210 PF00753 Metallo-beta-lactamase superfamily C5N99_10210 PF12706 Beta-lactamase superfamily domain C5N99_10225 PF00465 Iron-containing alcohol dehydrogenase C5N99_10240 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal C5N99_10240 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal C5N99_10250 PF01106 NifU-like domain C5N99_10255 PF07977 FabA-like domain C5N99_10260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C5N99_10260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C5N99_10300 PF02463 RecF/RecN/SMC N terminal domain C5N99_10305 PF01513 ATP-NAD kinase C5N99_10310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C5N99_10315 PF01584 CheW-like domain C5N99_10325 PF07009 NusG domain II C5N99_10330 PF03129 Anticodon binding domain C5N99_10330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C5N99_10330 PF04073 Aminoacyl-tRNA editing domain C5N99_10340 PF02545 Maf-like protein C5N99_10345 PF00318 Ribosomal protein S2 C5N99_10350 PF00889 Elongation factor TS C5N99_10355 PF01765 Ribosome recycling factor C5N99_10360 PF01255 Putative undecaprenyl diphosphate synthase C5N99_10370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C5N99_10370 PF13288 DXP reductoisomerase C-terminal domain C5N99_10370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C5N99_10375 PF02163 Peptidase family M50 C5N99_10375 PF17820 PDZ domain C5N99_10380 PF14353 CpXC protein C5N99_10390 PF00440 Bacterial regulatory proteins, tetR family C5N99_10400 PF17131 Outer membrane lipoprotein-sorting protein C5N99_10435 PF00456 Transketolase, thiamine diphosphate binding domain C5N99_10435 PF02779 Transketolase, pyrimidine binding domain C5N99_10440 PF07726 ATPase family associated with various cellular activities (AAA) C5N99_10440 PF17863 AAA lid domain C5N99_10445 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) C5N99_10445 PF12733 Cadherin-like beta sandwich domain C5N99_10455 PF04607 Region found in RelA / SpoT proteins C5N99_10455 PF02824 TGS domain C5N99_10455 PF13291 ACT domain C5N99_10460 PF17827 PrmC N-terminal domain C5N99_10460 PF05175 Methyltransferase small domain C5N99_10465 PF03462 PCRF domain C5N99_10465 PF00472 RF-1 domain C5N99_10470 PF12796 Ankyrin repeats (3 copies) C5N99_10480 PF16258 Domain of unknown function (DUF4912) C5N99_10485 PF03065 Glycosyl hydrolase family 57 C5N99_10485 PF09210 Domain of unknown function (DUF1957) C5N99_10490 PF00300 Histidine phosphatase superfamily (branch 1) C5N99_10495 PF17760 UvrA interaction domain C5N99_10495 PF17755 UvrA DNA-binding domain C5N99_10495 PF00005 ABC transporter C5N99_10505 PF00005 ABC transporter C5N99_10520 PF08191 LRR adjacent C5N99_10520 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) C5N99_10520 PF12799 Leucine Rich repeats (2 copies) C5N99_10520 PF12354 Bacterial adhesion/invasion protein N terminal C5N99_10525 PF00005 ABC transporter C5N99_10530 PF03577 Peptidase family C69 C5N99_10535 PF02719 Polysaccharide biosynthesis protein C5N99_10545 PF00672 HAMP domain C5N99_10545 PF00211 Adenylate and Guanylate cyclase catalytic domain C5N99_10550 PF00672 HAMP domain C5N99_10550 PF00211 Adenylate and Guanylate cyclase catalytic domain C5N99_10555 PF02401 LytB protein C5N99_10560 PF00266 Aminotransferase class-V C5N99_10565 PF01761 3-dehydroquinate synthase C5N99_10575 PF01434 Peptidase family M41 C5N99_10575 PF17862 AAA+ lid domain C5N99_10575 PF00004 ATPase family associated with various cellular activities (AAA) C5N99_10580 PF07228 Stage II sporulation protein E (SpoIIE) C5N99_10580 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain C5N99_10585 PF01740 STAS domain C5N99_10605 PF01545 Cation efflux family C5N99_10605 PF16916 Dimerisation domain of Zinc Transporter C5N99_10610 PF01212 Beta-eliminating lyase C5N99_10615 PF01325 Iron dependent repressor, N-terminal DNA binding domain C5N99_10615 PF02742 Iron dependent repressor, metal binding and dimerisation domain C5N99_10620 PF01297 Zinc-uptake complex component A periplasmic C5N99_10625 PF00005 ABC transporter C5N99_10630 PF00950 ABC 3 transport family C5N99_10635 PF00950 ABC 3 transport family C5N99_10640 PF04463 Protein of unknown function (DUF523) C5N99_10645 PF10431 C-terminal, D2-small domain, of ClpB protein C5N99_10645 PF00004 ATPase family associated with various cellular activities (AAA) C5N99_10645 PF17871 AAA lid domain C5N99_10645 PF07724 AAA domain (Cdc48 subfamily) C5N99_10645 PF02861 Clp amino terminal domain, pathogenicity island component C5N99_10650 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C5N99_10660 PF00158 Sigma-54 interaction domain C5N99_10660 PF02954 Bacterial regulatory protein, Fis family C5N99_10660 PF00989 PAS fold C5N99_10670 PF00989 PAS fold C5N99_10670 PF00512 His Kinase A (phospho-acceptor) domain C5N99_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5N99_10675 PF00158 Sigma-54 interaction domain C5N99_10675 PF00072 Response regulator receiver domain C5N99_10675 PF02954 Bacterial regulatory protein, Fis family C5N99_10705 PF16314 Domain of unknown function (DUF4954) C5N99_10735 PF00121 Triosephosphate isomerase C5N99_10745 PF01842 ACT domain C5N99_10745 PF03315 Serine dehydratase beta chain C5N99_10750 PF03313 Serine dehydratase alpha chain C5N99_10775 PF01250 Ribosomal protein S6 C5N99_10780 PF00436 Single-strand binding protein family C5N99_10785 PF01084 Ribosomal protein S18 C5N99_10790 PF01281 Ribosomal protein L9, N-terminal domain C5N99_10790 PF03948 Ribosomal protein L9, C-terminal domain C5N99_10795 PF00772 DnaB-like helicase N terminal domain C5N99_10795 PF03796 DnaB-like helicase C terminal domain C5N99_10825 PF00392 Bacterial regulatory proteins, gntR family C5N99_10825 PF07729 FCD domain C5N99_10830 PF01266 FAD dependent oxidoreductase C5N99_10830 PF04324 BFD-like [2Fe-2S] binding domain C5N99_10835 PF04324 BFD-like [2Fe-2S] binding domain C5N99_10835 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5N99_10845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C5N99_10845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C5N99_10865 PF14542 GCN5-related N-acetyl-transferase C5N99_10875 PF00440 Bacterial regulatory proteins, tetR family C5N99_10880 PF02652 L-lactate permease C5N99_10885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5N99_10895 PF03702 Anhydro-N-acetylmuramic acid kinase C5N99_10905 PF02254 TrkA-N domain C5N99_10905 PF02080 TrkA-C domain C5N99_10910 PF13091 PLD-like domain C5N99_10920 PF13654 AAA domain C5N99_10920 PF05362 Lon protease (S16) C-terminal proteolytic domain C5N99_10950 PF03932 CutC family C5N99_10985 PF01476 LysM domain C5N99_10985 PF01464 Transglycosylase SLT domain C5N99_10990 PF05736 OprF membrane domain C5N99_10990 PF00691 OmpA family C5N99_11000 PF07075 Protein of unknown function (DUF1343) C5N99_11005 PF01915 Glycosyl hydrolase family 3 C-terminal domain C5N99_11005 PF00933 Glycosyl hydrolase family 3 N terminal domain C5N99_11030 PF13847 Methyltransferase domain C5N99_11045 PF01554 MatE C5N99_11050 PF02492 CobW/HypB/UreG, nucleotide-binding domain C5N99_11050 PF07683 Cobalamin synthesis protein cobW C-terminal domain C5N99_11055 PF01979 Amidohydrolase family C5N99_11060 PF03313 Serine dehydratase alpha chain C5N99_11065 PF00375 Sodium:dicarboxylate symporter family C5N99_11070 PF00005 ABC transporter C5N99_11100 PF00004 ATPase family associated with various cellular activities (AAA) C5N99_11100 PF16450 Proteasomal ATPase OB C-terminal domain C5N99_11100 PF17758 Proteasomal ATPase OB N-terminal domain C5N99_11135 PF01850 PIN domain C5N99_11145 PF00814 Glycoprotease family C5N99_11165 PF00005 ABC transporter C5N99_11170 PF00154 recA bacterial DNA recombination protein C5N99_11175 PF01195 Peptidyl-tRNA hydrolase C5N99_11180 PF02580 D-Tyr-tRNA(Tyr) deacylase C5N99_11195 PF04304 Protein of unknown function (DUF454) C5N99_11200 PF00005 ABC transporter C5N99_11210 PF00403 Heavy-metal-associated domain C5N99_11215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C5N99_11215 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5N99_11220 PF01979 Amidohydrolase family C5N99_11235 PF00005 ABC transporter C5N99_11240 PF01032 FecCD transport family C5N99_11275 PF07687 Peptidase dimerisation domain C5N99_11275 PF01546 Peptidase family M20/M25/M40 C5N99_11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5N99_11280 PF01751 Toprim domain C5N99_11280 PF00204 DNA gyrase B C5N99_11280 PF00986 DNA gyrase B subunit, carboxyl terminus C5N99_11285 PF00675 Insulinase (Peptidase family M16) C5N99_11285 PF08367 Peptidase M16C associated C5N99_11285 PF05193 Peptidase M16 inactive domain C5N99_11290 PF14842 FliG N-terminal domain C5N99_11290 PF14841 FliG middle domain C5N99_11290 PF01706 FliG C-terminal domain C5N99_11300 PF00005 ABC transporter C5N99_11305 PF00005 ABC transporter C5N99_11305 PF12704 MacB-like periplasmic core domain C5N99_11305 PF02687 FtsX-like permease family C5N99_11350 PF01351 Ribonuclease HII C5N99_11375 PF00881 Nitroreductase family C5N99_11380 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C5N99_11380 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C5N99_11390 PF03006 Haemolysin-III related C5N99_11395 PF01197 Ribosomal protein L31 C5N99_11400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C5N99_11400 PF07497 Rho termination factor, RNA-binding domain C5N99_11400 PF07498 Rho termination factor, N-terminal domain C5N99_11405 PF18146 Damage-inducible protein CinA KH domain C5N99_11405 PF00994 Probable molybdopterin binding domain C5N99_11405 PF02464 Competence-damaged protein C5N99_11415 PF00795 Carbon-nitrogen hydrolase C5N99_11420 PF00216 Bacterial DNA-binding protein C5N99_11425 PF01649 Ribosomal protein S20 C5N99_11435 PF04620 Flagellar filament outer layer protein Flaa C5N99_11450 PF01520 N-acetylmuramoyl-L-alanine amidase C5N99_11455 PF02655 ATP-grasp domain C5N99_11455 PF00206 Lyase C5N99_11460 PF02348 Cytidylyltransferase C5N99_11470 PF13186 Iron-sulfur cluster-binding domain C5N99_11485 PF00072 Response regulator receiver domain C5N99_11495 PF01584 CheW-like domain C5N99_11500 PF07194 P2 response regulator binding domain C5N99_11500 PF01627 Hpt domain C5N99_11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C5N99_11500 PF02895 Signal transducing histidine kinase, homodimeric domain C5N99_11500 PF01584 CheW-like domain C5N99_11515 PF00085 Thioredoxin C5N99_11520 PF07992 Pyridine nucleotide-disulphide oxidoreductase C5N99_11540 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_11545 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_11550 PF00128 Alpha amylase, catalytic domain C5N99_11550 PF02903 Alpha amylase, N-terminal ig-like domain C5N99_11550 PF16657 Maltogenic Amylase, C-terminal domain C5N99_11555 PF13416 Bacterial extracellular solute-binding protein C5N99_11560 PF03714 Bacterial pullanase-associated domain C5N99_11560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C5N99_11560 PF00128 Alpha amylase, catalytic domain C5N99_11565 PF12627 Probable RNA and SrmB- binding site of polymerase A C5N99_11565 PF12626 Polymerase A arginine-rich C-terminus C5N99_11565 PF01743 Poly A polymerase head domain C5N99_11570 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C5N99_11585 PF16811 TRAP transporter T-component C5N99_11595 PF00375 Sodium:dicarboxylate symporter family C5N99_11610 PF00005 ABC transporter C5N99_11625 PF12833 Helix-turn-helix domain C5N99_11625 PF02311 AraC-like ligand binding domain C5N99_11650 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_11655 PF12911 N-terminal TM domain of oligopeptide transport permease C C5N99_11655 PF00528 Binding-protein-dependent transport system inner membrane component C5N99_11660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C5N99_11660 PF00005 ABC transporter C5N99_11665 PF00005 ABC transporter C5N99_11670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C5N99_11675 PF01966 HD domain C5N99_11720 PF00145 C-5 cytosine-specific DNA methylase C5N99_11725 PF04480 Protein of unknown function (DUF559) C5N99_11725 PF03852 DNA mismatch endonuclease Vsr C5N99_11735 PF00145 C-5 cytosine-specific DNA methylase C5N99_11735 PF01381 Helix-turn-helix C5N99_11755 PF08021 Siderophore-interacting FAD-binding domain C5N99_11755 PF00664 ABC transporter transmembrane region C5N99_11755 PF00005 ABC transporter C5N99_11755 PF04954 Siderophore-interacting protein C5N99_11765 PF00005 ABC transporter C5N99_11765 PF00664 ABC transporter transmembrane region C5N99_11770 PF04607 Region found in RelA / SpoT proteins C5N99_11785 PF00005 ABC transporter C5N99_11790 PF12631 MnmE helical domain C5N99_11790 PF01926 50S ribosome-binding GTPase C5N99_11790 PF10396 GTP-binding protein TrmE N-terminus C5N99_11795 PF05191 Adenylate kinase, active site lid C5N99_11805 PF01098 Cell cycle protein C5N99_11810 PF03717 Penicillin-binding Protein dimerisation domain C5N99_11810 PF00905 Penicillin binding protein transpeptidase domain C5N99_11845 PF04545 Sigma-70, region 4 C5N99_11845 PF04539 Sigma-70 region 3 C5N99_11845 PF04542 Sigma-70 region 2 C5N99_11845 PF00140 Sigma-70 factor, region 1.2 C5N99_11845 PF03979 Sigma-70 factor, region 1.1 C5N99_11850 PF01807 CHC2 zinc finger C5N99_11850 PF08275 DNA primase catalytic core, N-terminal domain C5N99_11855 PF02618 YceG-like family C5N99_11875 PF04343 Protein of unknown function, DUF488 C5N99_11885 PF01725 Ham1 family C5N99_11890 PF02492 CobW/HypB/UreG, nucleotide-binding domain C5N99_11895 PF12704 MacB-like periplasmic core domain C5N99_11895 PF02687 FtsX-like permease family C5N99_11895 PF00005 ABC transporter C5N99_11900 PF02743 Cache domain C5N99_11900 PF00672 HAMP domain C5N99_11900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_11905 PF00501 AMP-binding enzyme C5N99_11905 PF13193 AMP-binding enzyme C-terminal domain C5N99_11910 PF00877 NlpC/P60 family C5N99_11920 PF02492 CobW/HypB/UreG, nucleotide-binding domain C5N99_11920 PF07683 Cobalamin synthesis protein cobW C-terminal domain C5N99_11925 PF00107 Zinc-binding dehydrogenase C5N99_11925 PF08240 Alcohol dehydrogenase GroES-like domain C5N99_11930 PF00534 Glycosyl transferases group 1 C5N99_11930 PF08323 Starch synthase catalytic domain C5N99_11935 PF04073 Aminoacyl-tRNA editing domain C5N99_11940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C5N99_11955 PF01042 Endoribonuclease L-PSP C5N99_11960 PF03952 Enolase, N-terminal domain C5N99_11960 PF00113 Enolase, C-terminal TIM barrel domain C5N99_11980 PF01327 Polypeptide deformylase C5N99_11985 PF00551 Formyl transferase C5N99_11985 PF02911 Formyl transferase, C-terminal domain C5N99_11995 PF01555 DNA methylase C5N99_12005 PF00005 ABC transporter C5N99_12005 PF17760 UvrA interaction domain C5N99_12005 PF17755 UvrA DNA-binding domain C5N99_12010 PF10135 Rod binding protein C5N99_12015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5N99_12015 PF00460 Flagella basal body rod protein C5N99_12020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5N99_12020 PF00460 Flagella basal body rod protein C5N99_12030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C5N99_12030 PF01411 tRNA synthetases class II (A) C5N99_12030 PF02272 DHHA1 domain C5N99_12040 PF08241 Methyltransferase domain C5N99_12050 PF00561 alpha/beta hydrolase fold C5N99_12070 PF17922 Tetracyclin repressor-like, C-terminal domain C5N99_12070 PF00440 Bacterial regulatory proteins, tetR family C5N99_12090 PF00005 ABC transporter C5N99_12090 PF12848 ABC transporter C5N99_12105 PF13635 Domain of unknown function (DUF4143) C5N99_12105 PF13173 AAA domain C5N99_12110 PF00005 ABC transporter C5N99_12115 PF00005 ABC transporter C5N99_12115 PF12704 MacB-like periplasmic core domain C5N99_12115 PF02687 FtsX-like permease family C5N99_12130 PF10634 Fe2+ transport protein C5N99_12135 PF03239 Iron permease FTR1 family C5N99_12140 PF00842 Alanine racemase, C-terminal domain C5N99_12140 PF01168 Alanine racemase, N-terminal domain C5N99_12145 PF00227 Proteasome subunit C5N99_12150 PF07724 AAA domain (Cdc48 subfamily) C5N99_12150 PF00004 ATPase family associated with various cellular activities (AAA) C5N99_12155 PF00460 Flagella basal body rod protein C5N99_12160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C5N99_12160 PF00460 Flagella basal body rod protein C5N99_12165 PF02049 Flagellar hook-basal body complex protein FliE C5N99_12170 PF01514 Secretory protein of YscJ/FliF family C5N99_12170 PF08345 Flagellar M-ring protein C-terminal C5N99_12175 PF14842 FliG N-terminal domain C5N99_12175 PF14841 FliG middle domain C5N99_12175 PF01706 FliG C-terminal domain C5N99_12180 PF02108 Flagellar assembly protein FliH C5N99_12185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C5N99_12185 PF02874 ATP synthase alpha/beta family, beta-barrel domain C5N99_12185 PF18269 T3SS EscN ATPase C-terminal domain C5N99_12195 PF02770 Acyl-CoA dehydrogenase, middle domain C5N99_12195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C5N99_12195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C5N99_12200 PF00766 Electron transfer flavoprotein FAD-binding domain C5N99_12200 PF01012 Electron transfer flavoprotein domain C5N99_12205 PF00301 Rubredoxin C5N99_12205 PF00753 Metallo-beta-lactamase superfamily C5N99_12205 PF00258 Flavodoxin C5N99_12235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C5N99_12235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C5N99_12235 PF03129 Anticodon binding domain C5N99_12235 PF02824 TGS domain C5N99_12250 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system C5N99_12255 PF00919 Uncharacterized protein family UPF0004 C5N99_12255 PF18693 TRAM domain C5N99_12255 PF04055 Radical SAM superfamily C5N99_12290 PF17912 MalK OB fold domain C5N99_12290 PF00005 ABC transporter C5N99_12290 PF03459 TOBE domain C5N99_12295 PF00664 ABC transporter transmembrane region C5N99_12295 PF00005 ABC transporter C5N99_12300 PF00664 ABC transporter transmembrane region C5N99_12300 PF00005 ABC transporter C5N99_12315 PF00211 Adenylate and Guanylate cyclase catalytic domain C5N99_12315 PF02743 Cache domain C5N99_12315 PF00672 HAMP domain C5N99_12335 PF01661 Macro domain C5N99_12340 PF00365 Phosphofructokinase C5N99_12345 PF02875 Mur ligase family, glutamate ligase domain C5N99_12345 PF08245 Mur ligase middle domain C5N99_12355 PF00849 RNA pseudouridylate synthase C5N99_12360 PF00849 RNA pseudouridylate synthase C5N99_12370 PF00398 Ribosomal RNA adenine dimethylase C5N99_12385 PF03062 MBOAT, membrane-bound O-acyltransferase family C5N99_12395 PF01145 SPFH domain / Band 7 family C5N99_12400 PF01145 SPFH domain / Band 7 family C5N99_12415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C5N99_12415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C5N99_12435 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C5N99_12435 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C5N99_12460 PF08011 PD-(D/E)XK nuclease superfamily C5N99_12460 PF09820 Predicted AAA-ATPase C5N99_12465 PF00133 tRNA synthetases class I (I, L, M and V) C5N99_12465 PF08264 Anticodon-binding domain of tRNA C5N99_12475 PF06114 IrrE N-terminal-like domain C5N99_12475 PF09856 Predicted transcriptional regulator (DUF2083) C5N99_12475 PF01381 Helix-turn-helix C5N99_12510 PF17925 Tetracyclin repressor-like, C-terminal domain C5N99_12510 PF00440 Bacterial regulatory proteins, tetR family C5N99_12570 PF00849 RNA pseudouridylate synthase C5N99_12570 PF01479 S4 domain C5N99_12580 PF01963 TraB family C5N99_12585 PF02381 MraZ protein, putative antitoxin-like C5N99_12590 PF01795 MraW methylase family C5N99_12600 PF01225 Mur ligase family, catalytic domain C5N99_12600 PF02875 Mur ligase family, glutamate ligase domain C5N99_12600 PF08245 Mur ligase middle domain C5N99_12605 PF01098 Cell cycle protein C5N99_12610 PF03799 Cell division protein FtsQ C5N99_12610 PF08478 POTRA domain, FtsQ-type C5N99_12615 PF02491 SHS2 domain inserted in FTSA C5N99_12620 PF00091 Tubulin/FtsZ family, GTPase domain C5N99_12620 PF12327 FtsZ family, C-terminal domain C5N99_12625 PF00589 Phage integrase family C5N99_12625 PF02899 Phage integrase, N-terminal SAM-like domain C5N99_12630 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C5N99_12630 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C5N99_12650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C5N99_12660 PF16868 NMT1-like family C5N99_12665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C5N99_12665 PF00672 HAMP domain C5N99_12665 PF02743 Cache domain C5N99_12680 PF06463 Molybdenum Cofactor Synthesis C C5N99_12680 PF04055 Radical SAM superfamily C5N99_12685 PF01967 MoaC family C5N99_12700 PF01702 Queuine tRNA-ribosyltransferase C5N99_12715 PF00664 ABC transporter transmembrane region C5N99_12715 PF04954 Siderophore-interacting protein C5N99_12715 PF08021 Siderophore-interacting FAD-binding domain C5N99_12715 PF00005 ABC transporter C5N99_12720 PF00664 ABC transporter transmembrane region C5N99_12720 PF00005 ABC transporter C5N99_12735 PF10672 S-adenosylmethionine-dependent methyltransferase C5N99_12735 PF02926 THUMP domain C5N99_12735 PF01170 Putative RNA methylase family UPF0020 C5N99_12740 PF06971 Putative DNA-binding protein N-terminus C5N99_12740 PF02629 CoA binding domain C5N99_12755 PF01207 Dihydrouridine synthase (Dus) C5N99_12760 PF01026 TatD related DNase C5N99_12765 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C5N99_12765 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C5N99_12770 PF03180 NLPA lipoprotein C5N99_12785 PF02424 ApbE family C5N99_12795 PF00274 Fructose-bisphosphate aldolase class-I C5N99_12815 PF00583 Acetyltransferase (GNAT) family C5N99_12825 PF00465 Iron-containing alcohol dehydrogenase C5N99_12830 PF02163 Peptidase family M50 C5N99_12835 PF04851 Type III restriction enzyme, res subunit C5N99_12835 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C5N99_12835 PF00271 Helicase conserved C-terminal domain C5N99_12835 PF08463 EcoEI R protein C-terminal C5N99_12840 PF12161 HsdM N-terminal domain C5N99_12840 PF02384 N-6 DNA Methylase C5N99_12845 PF03543 Yersinia/Haemophilus virulence surface antigen C5N99_12845 PF05860 haemagglutination activity domain C5N99_12845 PF02661 Fic/DOC family C5N99_12845 PF13332 Hemagglutinin repeat C5N99_12845 PF13018 Extended Signal Peptide of Type V secretion system C5N99_12850 PF01420 Type I restriction modification DNA specificity domain C5N99_12855 PF01420 Type I restriction modification DNA specificity domain C5N99_12860 PF02899 Phage integrase, N-terminal SAM-like domain C5N99_12860 PF00589 Phage integrase family C5N99_12865 PF01850 PIN domain C5N99_12870 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C5N99_12875 PF01420 Type I restriction modification DNA specificity domain