TP_0001 SM00382 ATPases associated with a variety of cellular activities TP_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain TP_0002 SM00480 DNA polymerase III beta subunit TP_0005 SM00434 DNA Topoisomerase IV TP_0015 SM00873 B3/4 domain TP_0015 SM00874 tRNA synthetase B5 domain TP_0017 SM00028 Tetratricopeptide repeats TP_0020 SM00327 von Willebrand factor (vWF) type A domain TP_0025 SM01264 TP_0025 TP_0027 SM01091 Transporter associated domain TP_0028 SM01091 Transporter associated domain TP_0035 SM00382 ATPases associated with a variety of cellular activities TP_0040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP_0042 SM00257 Lysin motif TP_0044 SM01228 TP_0044 TP_0051 SM00937 TP_0051 TP_0054 SM00967 RNA 2'-O ribose methyltransferase substrate binding TP_0067 SM00028 Tetratricopeptide repeats TP_0071 SM00382 ATPases associated with a variety of cellular activities TP_0071 SM01086 C-terminal, D2-small domain, of ClpB protein TP_0079 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TP_0082 SM00382 ATPases associated with a variety of cellular activities TP_0089 SM00100 Cyclic nucleotide-monophosphate binding domain TP_0091 SM00840 TP_0091 TP_0095 SM00028 Tetratricopeptide repeats TP_0097 SM00316 Ribosomal protein S1-like RNA-binding domain TP_0098 SM00271 DnaJ molecular chaperone homology domain TP_0103 SM00487 DEAD-like helicases superfamily TP_0103 SM00490 helicase superfamily c-terminal domain TP_0105 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TP_0105 SM00474 3'-5' exonuclease TP_0105 SM00475 5'-3' exonuclease TP_0105 SM00479 TP_0105 TP_0105 SM00482 DNA polymerase A domain TP_0113 SM00244 prohibitin homologues TP_0114 SM00244 prohibitin homologues TP_0116 SM00487 DEAD-like helicases superfamily TP_0116 SM00490 helicase superfamily c-terminal domain TP_0120 SM00382 ATPases associated with a variety of cellular activities TP_0142 SM00382 ATPases associated with a variety of cellular activities TP_0154 SM00363 S4 RNA-binding domain TP_0155 SM00257 Lysin motif TP_0157 SM00563 Phosphate acyltransferases TP_0162 SM00382 ATPases associated with a variety of cellular activities TP_0164 SM00382 ATPases associated with a variety of cellular activities TP_0167 SM00529 Helix-turn-helix diphteria tox regulatory element TP_0168 SM00855 Phosphoglycerate mutase family TP_0171 SM00900 TP_0171 TP_0186 SM00729 Elongator protein 3, MiaB family, Radical SAM TP_0188 SM01403 TP_0188 TP_0192 SM01382 TP_0192 TP_0192 SM01383 TP_0192 TP_0195 SM00322 K homology RNA-binding domain TP_0199 SM01374 TP_0199 TP_0200 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TP_0212 SM00662 RNA polymerases D TP_0218 SM00331 Sigma factor PP2C-like phosphatases TP_0219 SM00331 Sigma factor PP2C-like phosphatases TP_0227 SM00382 ATPases associated with a variety of cellular activities TP_0229 SM00986 Uracil DNA glycosylase superfamily TP_0229 SM00987 UreE urease accessory protein, C-terminal domain TP_0230 SM00487 DEAD-like helicases superfamily TP_0230 SM00490 helicase superfamily c-terminal domain TP_0236 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TP_0236 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TP_0237 SM00649 Ribosomal protein L11/L12 TP_0242 SM00663 RNA polymerase I subunit A N-terminus TP_0246 SM00327 von Willebrand factor (vWF) type A domain TP_0247 SM00646 TP_0247 TP_0251 SM00411 bacterial (prokaryotic) histone like domain TP_0254 SM00357 Cold shock protein domain TP_0254 SM00382 ATPases associated with a variety of cellular activities TP_0254 SM00959 Rho termination factor, N-terminal domain TP_0261 SM00028 Tetratricopeptide repeats TP_0262 SM00100 Cyclic nucleotide-monophosphate binding domain TP_0263 SM00060 Fibronectin type 3 domain TP_0264 SM01133 TP_0264 TP_0268 SM00028 Tetratricopeptide repeats TP_0269 SM00729 Elongator protein 3, MiaB family, Radical SAM TP_0271 SM00470 ParB-like nuclease domain TP_0277 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP_0277 SM00245 tail specific protease TP_0279 SM00316 Ribosomal protein S1-like RNA-binding domain TP_0294 SM01400 TP_0294 TP_0303 SM00853 MutL C terminal dimerisation domain TP_0303 SM01340 TP_0303 TP_0306 SM00363 S4 RNA-binding domain TP_0306 SM01390 TP_0306 TP_0307 SM00740 TP_0307 TP_0308 SM00062 Bacterial periplasmic substrate-binding proteins TP_0309 SM00062 Bacterial periplasmic substrate-binding proteins TP_0321 SM00382 ATPases associated with a variety of cellular activities TP_0327 SM00935 Outer membrane protein (OmpH-like) TP_0328 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TP_0328 SM00534 ATPase domain of DNA mismatch repair MUTS family TP_0330 SM00382 ATPases associated with a variety of cellular activities TP_0331 SM01350 TP_0331 TP_0334 SM00530 Helix-turn-helix XRE-family like proteins TP_0337 SM00650 Ribosomal RNA adenine dimethylases TP_0339 SM00363 S4 RNA-binding domain TP_0343 SM00478 endonuclease III TP_0344 SM00487 DEAD-like helicases superfamily TP_0344 SM00490 helicase superfamily c-terminal domain TP_0344 SM00982 TP_0344 TP_0344 SM01058 CarD-like/TRCF domain TP_0356 SM00360 RNA recognition motif TP_0361 SM00563 Phosphate acyltransferases TP_0363 SM00073 Histidine Phosphotransfer domain TP_0363 SM00260 Two component signalling adaptor domain TP_0363 SM00387 Histidine kinase-like ATPases TP_0363 SM01231 TP_0363 TP_0364 SM00138 Methyltransferase, chemotaxis proteins TP_0364 SM00260 Two component signalling adaptor domain TP_0366 SM00448 cheY-homologous receiver domain TP_0379 SM00957 SecA DEAD-like domain TP_0379 SM00958 SecA preprotein cross-linking domain TP_0380 SM00487 DEAD-like helicases superfamily TP_0380 SM00490 helicase superfamily c-terminal domain TP_0389 SM00842 Cell division protein FtsA TP_0390 SM00864 Tubulin/FtsZ family, GTPase domain TP_0390 SM00865 Tubulin/FtsZ family, C-terminal domain TP_0392 SM00028 Tetratricopeptide repeats TP_0394 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TP_0394 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TP_0394 SM00493 TP_0394 TP_0402 SM00382 ATPases associated with a variety of cellular activities TP_0412 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. TP_0416 SM00382 ATPases associated with a variety of cellular activities TP_0416 SM00962 SRP54-type protein, GTPase domain TP_0416 SM00963 SRP54-type protein, helical bundle domain TP_0439 SM00260 Two component signalling adaptor domain TP_0444 SM00257 Lysin motif TP_0450 SM00838 Elongation factor G C-terminus TP_0450 SM00889 Elongation factor G, domain IV TP_0459 SM00363 S4 RNA-binding domain TP_0460 SM00028 Tetratricopeptide repeats TP_0461 SM00530 Helix-turn-helix XRE-family like proteins TP_0468 SM00028 Tetratricopeptide repeats TP_0469 SM00028 Tetratricopeptide repeats TP_0470 SM00028 Tetratricopeptide repeats TP_0471 SM00028 Tetratricopeptide repeats TP_0472 SM00465 GIY-YIG type nucleases (URI domain) TP_0485 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TP_0485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP_0488 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP_0488 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP_0489 SM00849 Metallo-beta-lactamase superfamily TP_0492 SM00400 zinc finger TP_0492 SM00493 TP_0492 TP_0496 SM00028 Tetratricopeptide repeats TP_0502 SM00248 ankyrin repeats TP_0508 SM00382 ATPases associated with a variety of cellular activities TP_0508 SM00994 ClpX C4-type zinc finger TP_0508 SM01086 C-terminal, D2-small domain, of ClpB protein TP_0511 SM01058 CarD-like/TRCF domain TP_0519 SM00382 ATPases associated with a variety of cellular activities TP_0519 SM00448 cheY-homologous receiver domain TP_0524 SM00382 ATPases associated with a variety of cellular activities TP_0524 SM00464 Found in ATP-dependent protease La (LON) TP_0525 SM00841 Elongation factor P, C-terminal TP_0525 SM01185 TP_0525 TP_0526 SM00487 DEAD-like helicases superfamily TP_0526 SM00490 helicase superfamily c-terminal domain TP_0526 SM00847 Helicase associated domain (HA2) Add an annotation TP_0543 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TP_0549 SM00382 ATPases associated with a variety of cellular activities TP_0549 SM01086 C-terminal, D2-small domain, of ClpB protein TP_0551 SM00014 Acid phosphatase homologues TP_0559 SM00981 TP_0559 TP_0560 SM00861 Transketolase, pyrimidine binding domain TP_0563 SM00271 DnaJ molecular chaperone homology domain TP_0572 SM00900 TP_0572 TP_0576 SM00937 TP_0576 TP_0578 SM00382 ATPases associated with a variety of cellular activities TP_0578 SM00962 SRP54-type protein, GTPase domain TP_0578 SM00963 SRP54-type protein, helical bundle domain TP_0581 SM00382 ATPases associated with a variety of cellular activities TP_0600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP_0611 SM00382 ATPases associated with a variety of cellular activities TP_0623 SM00257 Lysin motif TP_0630 SM00138 Methyltransferase, chemotaxis proteins TP_0631 SM00448 cheY-homologous receiver domain TP_0634 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TP_0634 SM00292 breast cancer carboxy-terminal domain TP_0634 SM00532 Ligase N family TP_0639 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP_0640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TP_0643 SM00479 TP_0643 TP_0648 SM00028 Tetratricopeptide repeats TP_0649 SM01091 Transporter associated domain TP_0651 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP_0652 SM00382 ATPases associated with a variety of cellular activities TP_0667 SM00382 ATPases associated with a variety of cellular activities TP_0669 SM00481 DNA polymerase alpha chain like domain TP_0674 SM00463 Small MutS-related domain TP_0681 SM01005 Alanine racemase, C-terminal domain TP_0685 SM00382 ATPases associated with a variety of cellular activities TP_0687 SM00487 DEAD-like helicases superfamily TP_0687 SM00490 helicase superfamily c-terminal domain TP_0692 SM00382 ATPases associated with a variety of cellular activities TP_0701 SM01409 TP_0701 TP_0710 SM01245 TP_0710 TP_0713 SM00382 ATPases associated with a variety of cellular activities TP_0713 SM00962 SRP54-type protein, GTPase domain TP_0740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP_0750 SM00327 von Willebrand factor (vWF) type A domain TP_0754 SM00729 Elongator protein 3, MiaB family, Radical SAM TP_0760 SM00740 TP_0760 TP_0764 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP_0765 SM00382 ATPases associated with a variety of cellular activities TP_0767 SM00838 Elongation factor G C-terminus TP_0767 SM00889 Elongation factor G, domain IV TP_0770 SM00487 DEAD-like helicases superfamily TP_0770 SM00490 helicase superfamily c-terminal domain TP_0773 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP_0775 SM00478 endonuclease III TP_0775 SM00525 TP_0775 TP_0786 SM00382 ATPases associated with a variety of cellular activities TP_0801 SM00382 ATPases associated with a variety of cellular activities TP_0801 SM01086 C-terminal, D2-small domain, of ClpB protein TP_0804 SM00382 ATPases associated with a variety of cellular activities TP_0805 SM00955 TP_0805 TP_0809 SM00358 Double-stranded RNA binding motif TP_0809 SM00535 Ribonuclease III family TP_0817 SM01192 TP_0817 TP_0817 SM01193 TP_0817 TP_0819 SM00849 Metallo-beta-lactamase superfamily TP_0820 SM00028 Tetratricopeptide repeats TP_0824 SM00861 Transketolase, pyrimidine binding domain TP_0831 SM00836 DALR anticodon binding domain TP_0831 SM01016 Arginyl tRNA synthetase N terminal dom TP_0832 SM00909 Sporulation and spore germination TP_0835 SM00248 ankyrin repeats TP_0837 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TP_0838 SM00382 ATPases associated with a variety of cellular activities TP_0841 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TP_0843 SM00271 DnaJ molecular chaperone homology domain TP_0844 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TP_0854 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TP_0854 SM00331 Sigma factor PP2C-like phosphatases TP_0864 SM00257 Lysin motif TP_0877 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP_0881 SM00382 ATPases associated with a variety of cellular activities TP_0886 SM00316 Ribosomal protein S1-like RNA-binding domain TP_0886 SM00322 K homology RNA-binding domain TP_0887 SM01387 TP_0887 TP_0892 SM00316 Ribosomal protein S1-like RNA-binding domain TP_0915 SM00028 Tetratricopeptide repeats TP_0917 SM00116 Domain in cystathionine beta-synthase and other proteins. TP_0917 SM00924 MgtE intracellular N domain TP_0920 SM00028 Tetratricopeptide repeats TP_0924 SM00316 Ribosomal protein S1-like RNA-binding domain TP_0924 SM00732 Likely ribonuclease with RNase H fold. TP_0936 SM01091 Transporter associated domain TP_0939 SM00890 Domain of unknown function TP_0948 SM00393 Putative single-stranded nucleic acids-binding domain TP_0948 SM01245 TP_0948 TP_0954 SM00028 Tetratricopeptide repeats TP_0964 SM00382 ATPases associated with a variety of cellular activities TP_0981 SM00267 diguanylate cyclase TP_0982 SM01160 TP_0982 TP_0984 SM00387 Histidine kinase-like ATPases TP_0990 SM00028 Tetratricopeptide repeats TP_0995 SM00100 Cyclic nucleotide-monophosphate binding domain TP_0999 SM00382 ATPases associated with a variety of cellular activities TP_0999 SM00843 TP_0999 TP_1004 SM00493 TP_1004 TP_1005 SM00382 ATPases associated with a variety of cellular activities TP_1006 SM00387 Histidine kinase-like ATPases TP_1006 SM00433 TopoisomeraseII TP_1010 SM00562 TP_1010 TP_1013 SM00883 Chaperonin 10 Kd subunit TP_1017 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TP_1018 SM00322 K homology RNA-binding domain TP_1018 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TP_1021 SM00845 GatB domain TP_1022 SM00382 ATPases associated with a variety of cellular activities