TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 Gene3D G3DSA:3.90.780.10 378 593 3.3E-62 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 ProSitePatterns PS00786 5'-nucleotidase signature 2. 116 127 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 Pfam PF02872 5'-nucleotidase, C-terminal domain 406 550 3.5E-27 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 Pfam PF00149 Calcineurin-like phosphoesterase 34 249 1.1E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 SUPERFAMILY SSF56300 32 316 1.75E-76 T 11-10-2018 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 TIGRFAM TIGR01530 nadN: NAD nucleotidase 34 578 0.0 T 11-10-2018 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN GO:0008253|GO:0009166 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 PRINTS PR01607 Apyrase family signature 233 256 1.8E-37 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 PRINTS PR01607 Apyrase family signature 280 300 1.8E-37 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 PRINTS PR01607 Apyrase family signature 525 544 1.8E-37 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 PRINTS PR01607 Apyrase family signature 32 50 1.8E-37 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 PRINTS PR01607 Apyrase family signature 214 231 1.8E-37 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 PRINTS PR01607 Apyrase family signature 444 467 1.8E-37 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 SUPERFAMILY SSF55816 402 590 3.27E-36 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TP_0104 fb7f27b05b096e7ccd2266a2941263d0 593 Gene3D G3DSA:3.60.21.10 25 377 5.5E-116 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.3E-33 T 11-10-2018 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 1.3E-33 T 11-10-2018 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.3E-33 T 11-10-2018 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.3E-33 T 11-10-2018 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 1.3E-33 T 11-10-2018 TP_0814 da5ee145e588a7be592340a5c2f85924 307 Gene3D G3DSA:3.50.50.60 7 301 2.8E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 4.0E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 4.0E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 4.0E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 4.0E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 283 4.0E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 4.0E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 4.0E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 4.0E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 4.0E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 Gene3D G3DSA:3.50.50.60 121 243 2.8E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0814 da5ee145e588a7be592340a5c2f85924 307 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 291 1.0E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TP_0814 da5ee145e588a7be592340a5c2f85924 307 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 302 5.2E-122 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 TP_0814 da5ee145e588a7be592340a5c2f85924 307 SUPERFAMILY SSF51905 1 301 1.53E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0814 da5ee145e588a7be592340a5c2f85924 307 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 TP_0828 39a289b84e9bef12672559a56f9ad909 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 14 83 2.0E-36 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TP_0828 39a289b84e9bef12672559a56f9ad909 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 122 23.998 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TP_0828 39a289b84e9bef12672559a56f9ad909 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 121 3.6E-27 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TP_0828 39a289b84e9bef12672559a56f9ad909 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 93 1.6E-19 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TP_0828 39a289b84e9bef12672559a56f9ad909 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 121 7.9E-27 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TP_0828 39a289b84e9bef12672559a56f9ad909 125 Gene3D G3DSA:3.90.470.20 1 122 2.1E-33 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TP_0828 39a289b84e9bef12672559a56f9ad909 125 SUPERFAMILY SSF56214 1 121 1.57E-28 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TP_0649 c4773e774cd5170eac49dec2c667f452 265 Pfam PF00571 CBS domain 110 159 6.3E-4 T 11-10-2018 IPR000644 CBS domain TP_0649 c4773e774cd5170eac49dec2c667f452 265 Pfam PF00571 CBS domain 41 96 0.0074 T 11-10-2018 IPR000644 CBS domain TP_0649 c4773e774cd5170eac49dec2c667f452 265 SUPERFAMILY SSF56176 171 251 7.63E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TP_0649 c4773e774cd5170eac49dec2c667f452 265 Gene3D G3DSA:3.30.465.10 167 251 1.4E-19 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TP_0649 c4773e774cd5170eac49dec2c667f452 265 SMART SM01091 174 252 2.4E-20 T 11-10-2018 IPR005170 Transporter-associated domain TP_0649 c4773e774cd5170eac49dec2c667f452 265 Pfam PF03471 Transporter associated domain 176 249 3.0E-17 T 11-10-2018 IPR005170 Transporter-associated domain TP_0649 c4773e774cd5170eac49dec2c667f452 265 Gene3D G3DSA:3.10.580.10 20 166 1.6E-54 T 11-10-2018 TP_0649 c4773e774cd5170eac49dec2c667f452 265 SUPERFAMILY SSF54631 35 175 1.04E-29 T 11-10-2018 TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 Gene3D G3DSA:2.70.70.10 225 368 8.6E-42 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 Gene3D G3DSA:3.10.350.10 135 172 5.7E-7 T 11-10-2018 IPR036779 LysM domain superfamily TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 Gene3D G3DSA:3.10.350.10 75 134 1.9E-12 T 11-10-2018 IPR036779 LysM domain superfamily TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 Pfam PF01551 Peptidase family M23 267 361 1.1E-27 T 11-10-2018 IPR016047 Peptidase M23 TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 SMART SM00257 86 130 1.7E-12 T 11-10-2018 IPR018392 LysM domain TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 SMART SM00257 136 181 5.1E-4 T 11-10-2018 IPR018392 LysM domain TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 Pfam PF01476 LysM domain 137 169 2.5E-7 T 11-10-2018 IPR018392 LysM domain TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 Pfam PF01476 LysM domain 87 130 2.0E-12 T 11-10-2018 IPR018392 LysM domain TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 SUPERFAMILY SSF54106 85 130 4.97E-9 T 11-10-2018 TP_0155 8c5a285e12963e50c6d3faebd1d4808a 371 SUPERFAMILY SSF51261 136 365 1.83E-48 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 SUPERFAMILY SSF56420 3 153 6.8E-54 T 11-10-2018 IPR036821 Peptide deformylase superfamily TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 PRINTS PR01576 Peptide deformylase signature 30 59 2.2E-35 T 11-10-2018 IPR023635 Peptide deformylase TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 PRINTS PR01576 Peptide deformylase signature 115 144 2.2E-35 T 11-10-2018 IPR023635 Peptide deformylase TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 PRINTS PR01576 Peptide deformylase signature 84 95 2.2E-35 T 11-10-2018 IPR023635 Peptide deformylase TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 PRINTS PR01576 Peptide deformylase signature 96 114 2.2E-35 T 11-10-2018 IPR023635 Peptide deformylase TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 Hamap MF_00163 Peptide deformylase [def]. 1 157 28.199 T 11-10-2018 IPR023635 Peptide deformylase TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 Pfam PF01327 Polypeptide deformylase 6 147 8.0E-48 T 11-10-2018 IPR023635 Peptide deformylase TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 PIRSF PIRSF004749 3 160 1.0E-49 T 11-10-2018 IPR023635 Peptide deformylase TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 7 149 2.6E-46 T 11-10-2018 IPR023635 Peptide deformylase TP_0757 9d9970f60b08fafbee320e270d34e9a5 162 Gene3D G3DSA:3.90.45.10 1 159 1.0E-56 T 11-10-2018 IPR036821 Peptide deformylase superfamily TP_0527 94b88b30f41f8e1afd3bfd5e0d84a948 209 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 2 206 21.001 T 11-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0527 94b88b30f41f8e1afd3bfd5e0d84a948 209 Pfam PF01813 ATP synthase subunit D 11 200 1.3E-42 T 11-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0527 94b88b30f41f8e1afd3bfd5e0d84a948 209 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 6 203 1.5E-32 T 11-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0016 59d016a0f83e140541535e1828c479f1 857 SUPERFAMILY SSF52540 55 244 1.76E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0016 59d016a0f83e140541535e1828c479f1 857 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 719 822 1.9E-6 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 TP_0016 59d016a0f83e140541535e1828c479f1 857 Pfam PF13654 AAA domain 42 589 7.6E-100 T 11-10-2018 TP_0016 59d016a0f83e140541535e1828c479f1 857 Gene3D G3DSA:3.30.230.10 592 852 3.0E-75 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_0016 59d016a0f83e140541535e1828c479f1 857 SUPERFAMILY SSF52540 50 597 7.85E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0016 59d016a0f83e140541535e1828c479f1 857 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 746 765 2.7E-5 T 11-10-2018 TP_0016 59d016a0f83e140541535e1828c479f1 857 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 2.7E-5 T 11-10-2018 TP_0016 59d016a0f83e140541535e1828c479f1 857 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 776 794 2.7E-5 T 11-10-2018 TP_0016 59d016a0f83e140541535e1828c479f1 857 SUPERFAMILY SSF54211 615 825 7.21E-25 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0016 59d016a0f83e140541535e1828c479f1 857 Gene3D G3DSA:3.40.50.300 23 177 1.9E-13 T 11-10-2018 TP_0016 59d016a0f83e140541535e1828c479f1 857 Gene3D G3DSA:3.40.50.300 266 501 6.7E-40 T 11-10-2018 TP_0933 912f0fb85ecef25264ef54375813c753 540 SUPERFAMILY SSF53623 75 382 3.79E-44 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0933 912f0fb85ecef25264ef54375813c753 540 Gene3D G3DSA:3.40.1190.10 103 374 8.7E-54 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0933 912f0fb85ecef25264ef54375813c753 540 Pfam PF01225 Mur ligase family, catalytic domain 26 100 2.0E-9 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TP_0933 912f0fb85ecef25264ef54375813c753 540 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 24 529 1.6E-180 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TP_0933 912f0fb85ecef25264ef54375813c753 540 Pfam PF02875 Mur ligase family, glutamate ligase domain 372 457 4.3E-16 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TP_0933 912f0fb85ecef25264ef54375813c753 540 Pfam PF08245 Mur ligase middle domain 112 349 1.7E-31 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TP_0933 912f0fb85ecef25264ef54375813c753 540 SUPERFAMILY SSF53244 371 530 8.7E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0933 912f0fb85ecef25264ef54375813c753 540 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 529 28.747 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TP_0933 912f0fb85ecef25264ef54375813c753 540 SUPERFAMILY SSF63418 21 103 1.44E-19 T 11-10-2018 IPR035911 MurE/MurF, N-terminal TP_0933 912f0fb85ecef25264ef54375813c753 540 Gene3D G3DSA:3.40.1390.10 4 102 6.3E-19 T 11-10-2018 TP_0933 912f0fb85ecef25264ef54375813c753 540 Gene3D G3DSA:3.90.190.20 375 533 7.1E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 SUPERFAMILY SSF52518 4 378 1.91E-73 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 SUPERFAMILY SSF52922 500 621 7.98E-22 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 281 3.3E-110 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 Pfam PF02780 Transketolase, C-terminal domain 495 614 1.5E-27 T 11-10-2018 IPR033248 Transketolase, C-terminal domain TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 Gene3D G3DSA:3.40.50.920 491 628 2.7E-23 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 SMART SM00861 316 479 2.1E-59 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 623 42.435 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 Gene3D G3DSA:3.40.50.970 314 482 1.6E-62 T 11-10-2018 TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 Pfam PF02779 Transketolase, pyrimidine binding domain 316 478 2.5E-36 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 618 2.1E-204 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TP_0824 6f3a32ce30f8d4c5e778ac9bfd626512 630 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TP_0206 0b5c4bca633ef97e84ea397747953fbc 172 SUPERFAMILY SSF54768 13 82 3.87E-21 T 11-10-2018 TP_0206 0b5c4bca633ef97e84ea397747953fbc 172 SUPERFAMILY SSF54211 85 165 1.21E-23 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0206 0b5c4bca633ef97e84ea397747953fbc 172 Gene3D G3DSA:3.30.160.20 12 78 1.0E-28 T 11-10-2018 TP_0206 0b5c4bca633ef97e84ea397747953fbc 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 33.274 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TP_0206 0b5c4bca633ef97e84ea397747953fbc 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 163 3.0E-25 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 TP_0206 0b5c4bca633ef97e84ea397747953fbc 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 78 3.0E-26 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 TP_0206 0b5c4bca633ef97e84ea397747953fbc 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 15 167 1.1E-63 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TP_0206 0b5c4bca633ef97e84ea397747953fbc 172 Gene3D G3DSA:3.30.230.10 80 172 2.0E-32 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_0206 0b5c4bca633ef97e84ea397747953fbc 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site TP_1021 33751b9332038a7de84d11ce40986cff 509 SMART SM00845 359 506 2.9E-59 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TP_1021 33751b9332038a7de84d11ce40986cff 509 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 25 507 34.88 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TP_1021 33751b9332038a7de84d11ce40986cff 509 Gene3D G3DSA:1.10.10.410 446 507 1.3E-16 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal TP_1021 33751b9332038a7de84d11ce40986cff 509 Gene3D G3DSA:1.10.150.380 328 445 1.7E-33 T 11-10-2018 TP_1021 33751b9332038a7de84d11ce40986cff 509 SUPERFAMILY SSF55931 27 323 1.18E-98 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TP_1021 33751b9332038a7de84d11ce40986cff 509 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 167 181 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 TP_1021 33751b9332038a7de84d11ce40986cff 509 Pfam PF02637 GatB domain 359 506 1.5E-45 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TP_1021 33751b9332038a7de84d11ce40986cff 509 SUPERFAMILY SSF89095 328 431 4.97E-28 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 TP_1021 33751b9332038a7de84d11ce40986cff 509 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 26 506 5.8E-160 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TP_1021 33751b9332038a7de84d11ce40986cff 509 Pfam PF02934 GatB/GatE catalytic domain 28 319 5.3E-103 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 Pfam PF00013 KH domain 197 244 2.5E-7 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 Pfam PF12072 Domain of unknown function (DUF3552) 4 188 6.4E-44 T 11-10-2018 IPR022711 Ribonuclease Y, N-terminal TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 SUPERFAMILY SSF109604 304 454 6.51E-30 T 11-10-2018 TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 TIGRFAM TIGR00277 HDIG: HDIG domain 316 393 1.1E-25 T 11-10-2018 IPR006675 HDIG domain TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 Hamap MF_00335 Ribonuclease Y [rny]. 3 504 23.637 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 Gene3D G3DSA:3.30.1370.10 191 288 1.9E-8 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 SUPERFAMILY SSF54791 194 288 4.75E-16 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 SMART SM00471 316 422 1.8E-13 T 11-10-2018 IPR003607 HD/PDEase domain TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 SMART SM00322 192 259 4.7E-8 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 Gene3D G3DSA:1.10.3210.10 309 475 4.5E-18 T 11-10-2018 TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 Pfam PF01966 HD domain 320 412 1.1E-19 T 11-10-2018 IPR006674 HD domain TP_1018 43ae3fdb4695d6d1b7e1a75d3a5f3c7a 504 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 6 504 8.5E-215 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 TP_0255 9dd74e766b3da7112eef8bc897d2847c 67 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.4E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0255 9dd74e766b3da7112eef8bc897d2847c 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0255 9dd74e766b3da7112eef8bc897d2847c 67 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.4E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0255 9dd74e766b3da7112eef8bc897d2847c 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 30.883 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0255 9dd74e766b3da7112eef8bc897d2847c 67 SUPERFAMILY SSF143800 1 65 1.37E-25 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0255 9dd74e766b3da7112eef8bc897d2847c 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0255 9dd74e766b3da7112eef8bc897d2847c 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.4E-30 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0255 9dd74e766b3da7112eef8bc897d2847c 67 Pfam PF01197 Ribosomal protein L31 1 64 1.2E-30 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0255 9dd74e766b3da7112eef8bc897d2847c 67 Gene3D G3DSA:2.30.170.50 1 67 2.9E-31 T 11-10-2018 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 Gene3D G3DSA:3.30.1360.70 1 115 3.6E-18 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 Gene3D G3DSA:3.40.50.620 121 465 6.5E-109 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 94 3.0E-12 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 SUPERFAMILY SSF55190 3 115 1.31E-19 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 Gene3D G3DSA:1.10.730.10 466 589 4.0E-32 T 11-10-2018 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 SUPERFAMILY SSF47323 461 589 1.96E-32 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 SMART SM00836 467 589 9.2E-42 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 Pfam PF00750 tRNA synthetases class I (R) 104 451 6.8E-48 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 143 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 SMART SM01016 6 94 3.5E-12 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 SUPERFAMILY SSF52374 120 461 1.23E-77 T 11-10-2018 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 30 589 9.7E-143 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 Pfam PF05746 DALR anticodon binding domain 467 589 1.4E-31 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 Hamap MF_00123 Arginine--tRNA ligase [argS]. 17 589 27.256 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 PRINTS PR01038 Arginyl-tRNA synthetase signature 312 333 3.2E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 3.2E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 3.2E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TP_0831 82f5c338bd5184e89e38d49f0e4f7aed 589 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 3.2E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TP_0402 ee86d2f86b2186d8a0b3aca82eca3d52 447 Gene3D G3DSA:3.40.50.12240 15 438 2.3E-153 T 11-10-2018 TP_0402 ee86d2f86b2186d8a0b3aca82eca3d52 447 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 356 5.3E-75 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0402 ee86d2f86b2186d8a0b3aca82eca3d52 447 SUPERFAMILY SSF52540 94 360 6.01E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0402 ee86d2f86b2186d8a0b3aca82eca3d52 447 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 3 436 5.4E-204 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0402 ee86d2f86b2186d8a0b3aca82eca3d52 447 SMART SM00382 159 340 6.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0402 ee86d2f86b2186d8a0b3aca82eca3d52 447 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 88 4.5E-8 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0402 ee86d2f86b2186d8a0b3aca82eca3d52 447 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 347 356 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0402 ee86d2f86b2186d8a0b3aca82eca3d52 447 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 23 434 6.8E-179 T 11-10-2018 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0805 f1eabf250212341d44c0f61665bedce2 759 SMART SM00955 274 571 4.0E-62 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TP_0805 f1eabf250212341d44c0f61665bedce2 759 SUPERFAMILY SSF50249 267 618 2.23E-71 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0805 f1eabf250212341d44c0f61665bedce2 759 Pfam PF00773 RNB domain 274 569 2.6E-40 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TP_0805 f1eabf250212341d44c0f61665bedce2 759 Gene3D G3DSA:1.10.10.10 182 248 4.6E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0618 df2acab8cb145a44f0f50b2be01c236c 119 ProDom PD332235 TP0127 TP0619 TP0618 TP0315 1 119 7.0E-64 T 11-10-2018 TP_0618 df2acab8cb145a44f0f50b2be01c236c 119 Pfam PF10895 Domain of unknown function (DUF2715) 19 117 2.4E-18 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 Gene3D G3DSA:1.20.140.160 101 257 1.3E-47 T 11-10-2018 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 PIRSF PIRSF000770 7 261 3.3E-56 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 254 3.2E-39 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 57 70 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 Pfam PF04545 Sigma-70, region 4 203 251 3.1E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 SUPERFAMILY SSF88659 167 256 1.72E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TP_0709 f2a2d18589b43e5dbae9a34180310930 262 SUPERFAMILY SSF88659 103 179 2.53E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TP_0709 f2a2d18589b43e5dbae9a34180310930 262 Pfam PF04542 Sigma-70 region 2 31 102 7.0E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 PRINTS PR00046 Major sigma-70 factor signature 57 70 6.2E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 PRINTS PR00046 Major sigma-70 factor signature 207 219 6.2E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 PRINTS PR00046 Major sigma-70 factor signature 239 250 6.2E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 PRINTS PR00046 Major sigma-70 factor signature 81 89 6.2E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 PRINTS PR00046 Major sigma-70 factor signature 224 239 6.2E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 SUPERFAMILY SSF88946 9 102 7.22E-27 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 Pfam PF04539 Sigma-70 region 3 110 164 7.0E-9 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 Gene3D G3DSA:1.10.1740.10 15 100 4.1E-30 T 11-10-2018 TP_0709 f2a2d18589b43e5dbae9a34180310930 262 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 31 255 3.1E-87 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TP_0510 385d35f7dca28308e9cc7ba924449748 605 Gene3D G3DSA:3.30.70.3380 374 484 9.6E-38 T 11-10-2018 TP_0510 385d35f7dca28308e9cc7ba924449748 605 Gene3D G3DSA:3.30.70.2570 486 560 2.5E-30 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily TP_0510 385d35f7dca28308e9cc7ba924449748 605 Pfam PF06421 GTP-binding protein LepA C-terminus 494 600 3.3E-46 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal TP_0510 385d35f7dca28308e9cc7ba924449748 605 SUPERFAMILY SSF54980 298 376 1.29E-19 T 11-10-2018 IPR035647 EF-G domain III/V-like TP_0510 385d35f7dca28308e9cc7ba924449748 605 TIGRFAM TIGR01393 lepA: elongation factor 4 9 601 7.5E-297 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 TP_0510 385d35f7dca28308e9cc7ba924449748 605 Gene3D G3DSA:3.30.70.870 292 373 3.0E-33 T 11-10-2018 TP_0510 385d35f7dca28308e9cc7ba924449748 605 Pfam PF00009 Elongation factor Tu GTP binding domain 9 187 1.0E-52 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0510 385d35f7dca28308e9cc7ba924449748 605 Pfam PF14492 Elongation Factor G, domain II 298 370 1.5E-6 T 11-10-2018 TP_0510 385d35f7dca28308e9cc7ba924449748 605 Pfam PF00679 Elongation factor G C-terminus 405 484 1.8E-17 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TP_0510 385d35f7dca28308e9cc7ba924449748 605 Pfam PF03144 Elongation factor Tu domain 2 211 281 4.5E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TP_0510 385d35f7dca28308e9cc7ba924449748 605 Gene3D G3DSA:3.40.50.300 7 191 9.1E-70 T 11-10-2018 TP_0510 385d35f7dca28308e9cc7ba924449748 605 SUPERFAMILY SSF54980 405 500 2.78E-21 T 11-10-2018 IPR035647 EF-G domain III/V-like TP_0510 385d35f7dca28308e9cc7ba924449748 605 SUPERFAMILY SSF52540 3 197 5.02E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0510 385d35f7dca28308e9cc7ba924449748 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 604 252.609 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 TP_0510 385d35f7dca28308e9cc7ba924449748 605 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0510 385d35f7dca28308e9cc7ba924449748 605 PRINTS PR00315 GTP-binding elongation factor signature 132 141 9.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0510 385d35f7dca28308e9cc7ba924449748 605 PRINTS PR00315 GTP-binding elongation factor signature 96 107 9.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0510 385d35f7dca28308e9cc7ba924449748 605 PRINTS PR00315 GTP-binding elongation factor signature 55 63 9.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0510 385d35f7dca28308e9cc7ba924449748 605 PRINTS PR00315 GTP-binding elongation factor signature 80 90 9.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0510 385d35f7dca28308e9cc7ba924449748 605 Gene3D G3DSA:2.40.30.10 193 291 6.5E-29 T 11-10-2018 TP_0510 385d35f7dca28308e9cc7ba924449748 605 SUPERFAMILY SSF50447 171 294 4.42E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TP_0510 385d35f7dca28308e9cc7ba924449748 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 182 1.5E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TP_0294 4175d55ece8588d30954c8329fda65a3 421 Gene3D G3DSA:3.40.50.2020 70 231 2.5E-41 T 11-10-2018 TP_0294 4175d55ece8588d30954c8329fda65a3 421 SUPERFAMILY SSF53271 240 399 1.97E-31 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TP_0294 4175d55ece8588d30954c8329fda65a3 421 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 86 191 1.4E-21 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TP_0294 4175d55ece8588d30954c8329fda65a3 421 Gene3D G3DSA:3.40.50.2020 232 371 1.4E-29 T 11-10-2018 TP_0294 4175d55ece8588d30954c8329fda65a3 421 SMART SM01400 9 184 4.7E-9 T 11-10-2018 TP_0294 4175d55ece8588d30954c8329fda65a3 421 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 63 400 1.7E-110 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TP_0294 4175d55ece8588d30954c8329fda65a3 421 Pfam PF00156 Phosphoribosyl transferase domain 211 371 1.9E-34 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TP_0294 4175d55ece8588d30954c8329fda65a3 421 SUPERFAMILY SSF53271 88 229 9.57E-28 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 Gene3D G3DSA:2.30.330.10 257 348 3.1E-34 T 11-10-2018 IPR036429 SpoA-like superfamily TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 SUPERFAMILY SSF101801 267 346 4.32E-24 T 11-10-2018 IPR036429 SpoA-like superfamily TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 270 339 7.2E-25 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 Gene3D G3DSA:3.40.1550.10 36 216 4.3E-19 T 11-10-2018 IPR028976 CheC-like superfamily TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 PRINTS PR00956 Flagellar motor switch protein FliN signature 286 302 6.1E-29 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 PRINTS PR00956 Flagellar motor switch protein FliN signature 269 285 6.1E-29 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 PRINTS PR00956 Flagellar motor switch protein FliN signature 302 315 6.1E-29 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 PRINTS PR00956 Flagellar motor switch protein FliN signature 315 330 6.1E-29 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 SUPERFAMILY SSF103039 37 216 1.96E-24 T 11-10-2018 IPR028976 CheC-like superfamily TP_0720 907da1e92b522dd4f143e1e3a4d5457e 348 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 266 340 1.3E-30 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 TP_0057 04395fdf12745f9d3fcbe4facf0120e6 469 PIRSF PIRSF015658 82 468 2.5E-184 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 TP_0057 04395fdf12745f9d3fcbe4facf0120e6 469 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 112 465 9.3E-150 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 TP_0057 04395fdf12745f9d3fcbe4facf0120e6 469 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 112 462 2.0E-181 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 TP_0204 429f6bde87262591694efcdec92f7fb9 179 Gene3D G3DSA:3.90.930.12 1 82 2.6E-25 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0204 429f6bde87262591694efcdec92f7fb9 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0204 429f6bde87262591694efcdec92f7fb9 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 33.893 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TP_0204 429f6bde87262591694efcdec92f7fb9 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 6.8E-65 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TP_0204 429f6bde87262591694efcdec92f7fb9 179 Gene3D G3DSA:3.90.930.12 83 179 7.8E-33 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0204 429f6bde87262591694efcdec92f7fb9 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.7E-28 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TP_0204 429f6bde87262591694efcdec92f7fb9 179 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.7E-28 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TP_0204 429f6bde87262591694efcdec92f7fb9 179 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.7E-28 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TP_0204 429f6bde87262591694efcdec92f7fb9 179 Pfam PF00347 Ribosomal protein L6 11 82 6.2E-17 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0204 429f6bde87262591694efcdec92f7fb9 179 Pfam PF00347 Ribosomal protein L6 91 164 3.7E-16 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0204 429f6bde87262591694efcdec92f7fb9 179 SUPERFAMILY SSF56053 83 176 4.71E-31 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0204 429f6bde87262591694efcdec92f7fb9 179 PIRSF PIRSF002162 1 177 9.1E-40 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0204 429f6bde87262591694efcdec92f7fb9 179 SUPERFAMILY SSF56053 2 82 8.8E-24 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0125 cb0c1b38edd27f47c3386fe09630efe7 264 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 6 262 3.5E-100 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TP_0125 cb0c1b38edd27f47c3386fe09630efe7 264 Gene3D G3DSA:3.60.10.10 5 263 2.2E-82 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TP_0125 cb0c1b38edd27f47c3386fe09630efe7 264 SUPERFAMILY SSF56219 6 262 4.06E-73 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TP_0125 cb0c1b38edd27f47c3386fe09630efe7 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 9 255 7.9E-23 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TP_0125 cb0c1b38edd27f47c3386fe09630efe7 264 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 6 261 2.3E-80 T 11-10-2018 TP_0125 cb0c1b38edd27f47c3386fe09630efe7 264 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 32 41 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 TP_0246 0ef8bcda3ad97e9d5ef956430e9492d8 597 SMART SM00327 376 565 9.2E-18 T 11-10-2018 IPR002035 von Willebrand factor, type A TP_0246 0ef8bcda3ad97e9d5ef956430e9492d8 597 Pfam PF00092 von Willebrand factor type A domain 379 538 3.6E-10 T 11-10-2018 IPR002035 von Willebrand factor, type A TP_0246 0ef8bcda3ad97e9d5ef956430e9492d8 597 Gene3D G3DSA:3.40.50.410 365 552 1.6E-17 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TP_0246 0ef8bcda3ad97e9d5ef956430e9492d8 597 SUPERFAMILY SSF53300 377 538 5.79E-17 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TP_0111 09e19dcf7eecd6768db7ab1eb98993e8 475 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 6 475 2.7E-142 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TP_0111 09e19dcf7eecd6768db7ab1eb98993e8 475 PIRSF PIRSF000774 1 475 1.6E-73 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TP_0111 09e19dcf7eecd6768db7ab1eb98993e8 475 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 2 46 2.6E-10 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TP_0111 09e19dcf7eecd6768db7ab1eb98993e8 475 Pfam PF04963 Sigma-54 factor, core binding domain 87 296 1.4E-20 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 TP_0111 09e19dcf7eecd6768db7ab1eb98993e8 475 Pfam PF04552 Sigma-54, DNA binding domain 308 474 1.3E-35 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding TP_0111 09e19dcf7eecd6768db7ab1eb98993e8 475 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 459 466 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TP_0111 09e19dcf7eecd6768db7ab1eb98993e8 475 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 354 373 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TP_0111 09e19dcf7eecd6768db7ab1eb98993e8 475 Gene3D G3DSA:1.10.10.60 420 475 9.4E-12 T 11-10-2018 TP_0111 09e19dcf7eecd6768db7ab1eb98993e8 475 Gene3D G3DSA:1.10.10.1330 89 205 2.0E-8 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily TP_0965 34358b4c784e69e4080e94a7d777fd1e 320 Gene3D G3DSA:2.40.50.100 63 176 9.0E-27 T 11-10-2018 TP_0965 34358b4c784e69e4080e94a7d777fd1e 320 Gene3D G3DSA:2.40.30.170 57 254 9.0E-27 T 11-10-2018 TP_0965 34358b4c784e69e4080e94a7d777fd1e 320 Gene3D G3DSA:1.10.287.470 97 141 9.0E-27 T 11-10-2018 TP_0965 34358b4c784e69e4080e94a7d777fd1e 320 SUPERFAMILY SSF111369 53 193 2.48E-10 T 11-10-2018 TP_0965 34358b4c784e69e4080e94a7d777fd1e 320 Gene3D G3DSA:2.20.25.620 255 312 9.0E-27 T 11-10-2018 TP_0965 34358b4c784e69e4080e94a7d777fd1e 320 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 220 2.7E-16 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TP_0574 b4f46650414c11870e5dc02ebf7800e6 434 SUPERFAMILY SSF81986 226 350 6.02E-56 T 11-10-2018 IPR038031 Tp47 lipoprotein, middle and C-terminal domain TP_0574 b4f46650414c11870e5dc02ebf7800e6 434 Gene3D G3DSA:2.60.40.1300 224 351 1.4E-65 T 11-10-2018 IPR038698 Tp47, domain C superfamily TP_0574 b4f46650414c11870e5dc02ebf7800e6 434 Gene3D G3DSA:2.60.40.1270 352 434 5.3E-56 T 11-10-2018 IPR029220 Penicillin-binding protein Tp47, domain D TP_0574 b4f46650414c11870e5dc02ebf7800e6 434 Pfam PF14889 Penicillin-binding protein Tp47 domain a 26 200 8.9E-17 T 11-10-2018 IPR029221 Penicillin-binding protein Tp47 domain A TP_0574 b4f46650414c11870e5dc02ebf7800e6 434 Pfam PF14888 Penicillin-binding protein Tp47 domain C 204 348 1.1E-11 T 11-10-2018 IPR029218 Penicillin-binding protein Tp47, domain C TP_0574 b4f46650414c11870e5dc02ebf7800e6 434 Gene3D G3DSA:2.30.30.470 63 174 2.0E-114 T 11-10-2018 TP_0574 b4f46650414c11870e5dc02ebf7800e6 434 Gene3D G3DSA:3.30.1490.200 26 223 2.0E-114 T 11-10-2018 TP_0574 b4f46650414c11870e5dc02ebf7800e6 434 SUPERFAMILY SSF82220 26 225 2.48E-129 T 11-10-2018 IPR036154 Tp47, N-terminal domain superfamily TP_0574 b4f46650414c11870e5dc02ebf7800e6 434 SUPERFAMILY SSF81986 352 433 1.83E-47 T 11-10-2018 IPR038031 Tp47 lipoprotein, middle and C-terminal domain TP_0614 4e64cf687d32651be891c88a1104423b 404 Gene3D G3DSA:3.90.1150.10 7 394 1.9E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TP_0614 4e64cf687d32651be891c88a1104423b 404 Gene3D G3DSA:3.40.640.10 31 291 1.9E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TP_0614 4e64cf687d32651be891c88a1104423b 404 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 402 2.0E-162 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TP_0614 4e64cf687d32651be891c88a1104423b 404 Pfam PF00266 Aminotransferase class-V 21 390 3.3E-132 T 11-10-2018 IPR000192 Aminotransferase class V domain TP_0614 4e64cf687d32651be891c88a1104423b 404 SUPERFAMILY SSF53383 6 397 3.67E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TP_0614 4e64cf687d32651be891c88a1104423b 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 212 231 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TP_0616 cfdff2eaacf9931f3663fe99ddcafcdf 254 SUPERFAMILY SSF75445 154 231 1.22E-19 T 11-10-2018 TP_0616 cfdff2eaacf9931f3663fe99ddcafcdf 254 SUPERFAMILY SSF100950 15 171 7.78E-33 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TP_0616 cfdff2eaacf9931f3663fe99ddcafcdf 254 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 70 245 1.1E-56 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 TP_0616 cfdff2eaacf9931f3663fe99ddcafcdf 254 Gene3D G3DSA:3.40.50.1360 34 245 4.0E-70 T 11-10-2018 TP_0616 cfdff2eaacf9931f3663fe99ddcafcdf 254 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 34 246 1.9E-65 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 TP_0616 cfdff2eaacf9931f3663fe99ddcafcdf 254 Gene3D G3DSA:3.30.70.260 149 229 4.0E-70 T 11-10-2018 TP_0616 cfdff2eaacf9931f3663fe99ddcafcdf 254 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 14 250 31.026 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 TP_0195 76d327fdba2f485f68afec1e17383278 247 Gene3D G3DSA:3.30.1140.32 110 209 2.4E-37 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0195 76d327fdba2f485f68afec1e17383278 247 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 208 35.985 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TP_0195 76d327fdba2f485f68afec1e17383278 247 Gene3D G3DSA:3.30.300.20 17 109 3.0E-27 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TP_0195 76d327fdba2f485f68afec1e17383278 247 SMART SM00322 62 127 1.2E-4 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TP_0195 76d327fdba2f485f68afec1e17383278 247 Pfam PF00189 Ribosomal protein S3, C-terminal domain 122 204 3.5E-35 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0195 76d327fdba2f485f68afec1e17383278 247 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 212 1.9E-93 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TP_0195 76d327fdba2f485f68afec1e17383278 247 SUPERFAMILY SSF54814 2 108 9.72E-32 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TP_0195 76d327fdba2f485f68afec1e17383278 247 SUPERFAMILY SSF54821 110 206 3.27E-34 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0195 76d327fdba2f485f68afec1e17383278 247 Pfam PF07650 KH domain 48 112 8.9E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0195 76d327fdba2f485f68afec1e17383278 247 ProSitePatterns PS00548 Ribosomal protein S3 signature. 165 199 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 5.6E-217 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 SUPERFAMILY SSF51604 139 427 4.95E-123 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 PIRSF PIRSF001400 1 429 1.5E-187 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 Gene3D G3DSA:3.20.20.120 128 432 1.3E-135 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 Gene3D G3DSA:3.30.390.10 1 127 2.2E-54 T 11-10-2018 IPR029017 Enolase-like, N-terminal TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 SUPERFAMILY SSF54826 4 137 3.39E-56 T 11-10-2018 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 427 2.5E-127 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 Hamap MF_00318 Enolase [eno]. 2 415 44.316 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 PRINTS PR00148 Enolase signature 161 174 2.1E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 PRINTS PR00148 Enolase signature 367 384 2.1E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 PRINTS PR00148 Enolase signature 107 123 2.1E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 PRINTS PR00148 Enolase signature 338 352 2.1E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 PRINTS PR00148 Enolase signature 37 51 2.1E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 PRINTS PR00148 Enolase signature 315 326 2.1E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 SMART SM01192 139 429 1.8E-204 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 SMART SM01193 4 134 3.4E-93 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 Pfam PF03952 Enolase, N-terminal domain 4 134 4.9E-59 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TP_0817 4f05dd07370f49e4f3dc4029727311a6 432 ProSitePatterns PS00164 Enolase signature. 338 351 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 Gene3D G3DSA:3.30.930.10 173 485 8.7E-121 T 11-10-2018 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 Gene3D G3DSA:3.30.980.10 20 172 1.2E-56 T 11-10-2018 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 SUPERFAMILY SSF55186 17 191 1.83E-51 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 Pfam PF03129 Anticodon binding domain 495 582 2.4E-18 T 11-10-2018 IPR004154 Anticodon-binding TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 119 169 4.6E-11 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 Gene3D G3DSA:3.40.50.800 486 591 9.2E-27 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 272 483 9.0E-42 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 SUPERFAMILY SSF55681 193 480 4.38E-89 T 11-10-2018 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 PRINTS PR01047 Threonyl-tRNA synthetase signature 461 474 2.0E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 PRINTS PR01047 Threonyl-tRNA synthetase signature 312 335 2.0E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 PRINTS PR01047 Threonyl-tRNA synthetase signature 279 307 2.0E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 PRINTS PR01047 Threonyl-tRNA synthetase signature 488 500 2.0E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 PRINTS PR01047 Threonyl-tRNA synthetase signature 416 444 2.0E-50 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 SMART SM00863 118 169 2.7E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 SUPERFAMILY SSF52954 483 587 4.23E-28 T 11-10-2018 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 23 573 3.3E-201 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 17 587 33.638 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TP_0837 c0bf6a21999dd2f15785c4d13e013c66 592 Gene3D G3DSA:3.30.54.20 81 135 1.2E-56 T 11-10-2018 TP_0207 5a34a5a0e902b082c20a7c5c806482c7 153 Gene3D G3DSA:3.100.10.10 69 150 3.7E-20 T 11-10-2018 TP_0207 5a34a5a0e902b082c20a7c5c806482c7 153 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 146 4.2E-35 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P TP_0207 5a34a5a0e902b082c20a7c5c806482c7 153 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 6 146 2.0E-55 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0207 5a34a5a0e902b082c20a7c5c806482c7 153 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0207 5a34a5a0e902b082c20a7c5c806482c7 153 SUPERFAMILY SSF52080 6 148 1.11E-40 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily TP_0207 5a34a5a0e902b082c20a7c5c806482c7 153 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 4 148 19.765 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 TP_0930 5d7ca0245aeb72e598c7fef96d61fa90 573 Pfam PF01973 Protein of unknown function DUF115 194 363 1.5E-16 T 11-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TP_0986 b8fc1c0774af6d0ee296ed89178d0da1 294 SUPERFAMILY SSF103481 42 141 1.26E-13 T 11-10-2018 TP_0986 b8fc1c0774af6d0ee296ed89178d0da1 294 Pfam PF00892 EamA-like transporter family 8 136 1.7E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TP_0986 b8fc1c0774af6d0ee296ed89178d0da1 294 SUPERFAMILY SSF103481 184 281 2.22E-12 T 11-10-2018 TP_0182 ae97e13f5994248b4b728eaf02e768a5 259 Gene3D G3DSA:3.90.870.10 43 241 1.2E-36 T 11-10-2018 TP_0182 ae97e13f5994248b4b728eaf02e768a5 259 SUPERFAMILY SSF55821 55 238 9.77E-32 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TP_0182 ae97e13f5994248b4b728eaf02e768a5 259 Pfam PF01300 Telomere recombination 64 233 2.3E-21 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 237 374 2.3E-66 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 Gene3D G3DSA:3.30.300.10 5 238 7.1E-163 T 11-10-2018 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 SUPERFAMILY SSF55973 116 236 7.36E-46 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 235 4.9E-42 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 SUPERFAMILY SSF55973 237 383 1.77E-66 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 PIRSF PIRSF000497 1 386 4.8E-168 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 Gene3D G3DSA:3.30.300.10 102 378 7.1E-163 T 11-10-2018 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 Gene3D G3DSA:3.30.300.10 10 275 7.1E-163 T 11-10-2018 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 384 1.8E-188 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 SUPERFAMILY SSF55973 2 107 3.88E-40 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 263 271 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 100 1.6E-36 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0794 37457083b80eb2b3ab1aed19a3de20d1 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 385 57.736 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TP_0082 b6d54616d2cef548f488a7164703804e 600 Pfam PF13492 GAF domain 89 225 2.8E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 TP_0082 b6d54616d2cef548f488a7164703804e 600 SUPERFAMILY SSF55781 90 235 1.9E-13 T 11-10-2018 TP_0082 b6d54616d2cef548f488a7164703804e 600 SUPERFAMILY SSF52540 257 499 6.36E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0082 b6d54616d2cef548f488a7164703804e 600 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 344 359 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TP_0082 b6d54616d2cef548f488a7164703804e 600 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 471 480 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TP_0082 b6d54616d2cef548f488a7164703804e 600 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 282 295 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TP_0082 b6d54616d2cef548f488a7164703804e 600 Pfam PF00158 Sigma-54 interaction domain 258 424 3.0E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TP_0082 b6d54616d2cef548f488a7164703804e 600 Pfam PF02954 Bacterial regulatory protein, Fis family 559 598 1.1E-4 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TP_0082 b6d54616d2cef548f488a7164703804e 600 Gene3D G3DSA:3.30.450.40 87 236 3.1E-11 T 11-10-2018 IPR029016 GAF-like domain superfamily TP_0082 b6d54616d2cef548f488a7164703804e 600 Gene3D G3DSA:1.10.10.60 539 600 5.5E-9 T 11-10-2018 TP_0082 b6d54616d2cef548f488a7164703804e 600 Gene3D G3DSA:3.40.50.300 248 428 1.2E-64 T 11-10-2018 TP_0082 b6d54616d2cef548f488a7164703804e 600 Gene3D G3DSA:1.10.8.60 429 506 1.5E-20 T 11-10-2018 TP_0082 b6d54616d2cef548f488a7164703804e 600 SMART SM00382 278 421 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0956 0b8908f39296f21348f31f123dfc75a3 323 Gene3D G3DSA:1.25.40.920 52 323 1.9E-102 T 11-10-2018 IPR038537 TatT superfamily TP_0956 0b8908f39296f21348f31f123dfc75a3 323 Pfam PF16811 TRAP transporter T-component 59 321 1.7E-101 T 11-10-2018 IPR031823 TRAP transporter T-component TP_0516 92de0cbe1789eca175637b33b98a0219 526 Pfam PF03023 MviN-like protein 33 488 4.6E-147 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 PRINTS PR01806 Virulence factor MviN signature 265 291 2.3E-49 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 PRINTS PR01806 Virulence factor MviN signature 160 181 2.3E-49 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 PRINTS PR01806 Virulence factor MviN signature 415 432 2.3E-49 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 PRINTS PR01806 Virulence factor MviN signature 136 160 2.3E-49 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 PRINTS PR01806 Virulence factor MviN signature 37 56 2.3E-49 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 PRINTS PR01806 Virulence factor MviN signature 56 72 2.3E-49 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 PRINTS PR01806 Virulence factor MviN signature 363 382 2.3E-49 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 7 475 16.783 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 520 9.5E-164 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0516 92de0cbe1789eca175637b33b98a0219 526 PIRSF PIRSF002869 2 524 4.2E-119 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 SMART SM00649 11 143 8.9E-79 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 5 143 7.0E-59 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 Gene3D G3DSA:3.30.1550.10 4 74 9.5E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 SUPERFAMILY SSF46906 70 143 3.27E-23 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 40 76 3.0E-9 T 11-10-2018 TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 ProSitePatterns PS00359 Ribosomal protein L11 signature. 129 143 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 Pfam PF03946 Ribosomal protein L11, N-terminal domain 11 69 7.2E-28 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 SUPERFAMILY SSF54747 5 75 1.44E-27 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 Gene3D G3DSA:1.10.10.250 75 143 3.4E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 7 144 29.919 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TP_0237 764d90bf49e0c1cbdb65331f5589f845 146 Pfam PF00298 Ribosomal protein L11, RNA binding domain 74 142 6.6E-21 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 TP_0961 651f5e9358bc7658063293d666902364 271 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 141 7.4E-39 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TP_0961 651f5e9358bc7658063293d666902364 271 Pfam PF00460 Flagella basal body rod protein 6 35 1.4E-10 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TP_0961 651f5e9358bc7658063293d666902364 271 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 192 263 5.6E-21 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TP_0961 651f5e9358bc7658063293d666902364 271 SUPERFAMILY SSF117143 99 228 9.02E-22 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TP_0961 651f5e9358bc7658063293d666902364 271 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 247 3.5E-54 T 11-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 TP_0554 065bde19cc953ca666761d8784f6831e 222 SUPERFAMILY SSF56784 3 220 2.94E-50 T 11-10-2018 IPR036412 HAD-like superfamily TP_0554 065bde19cc953ca666761d8784f6831e 222 Gene3D G3DSA:1.10.150.240 20 90 2.4E-52 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TP_0554 065bde19cc953ca666761d8784f6831e 222 Gene3D G3DSA:3.40.50.1000 8 212 2.4E-52 T 11-10-2018 IPR023214 HAD superfamily TP_0554 065bde19cc953ca666761d8784f6831e 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 191 1.6E-33 T 11-10-2018 TP_0554 065bde19cc953ca666761d8784f6831e 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 184 1.0E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TP_0554 065bde19cc953ca666761d8784f6831e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 3.6E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TP_0554 065bde19cc953ca666761d8784f6831e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 3.6E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TP_0554 065bde19cc953ca666761d8784f6831e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 3.6E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TP_0554 065bde19cc953ca666761d8784f6831e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.6E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.673 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 PIRSF PIRSF002133 1 124 1.4E-55 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.5E-61 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.5E-61 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.5E-61 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.5E-61 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.5E-61 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.5E-61 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 Gene3D G3DSA:2.40.50.140 1 124 2.1E-62 T 11-10-2018 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 SUPERFAMILY SSF50249 2 123 2.4E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.6E-42 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0243 79cb911a7b0a3cbd04acae0de258ac89 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.3E-69 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0706 9e89d267baef5b417a24c4d7f2eb454a 308 Pfam PF01551 Peptidase family M23 206 300 3.7E-30 T 11-10-2018 IPR016047 Peptidase M23 TP_0706 9e89d267baef5b417a24c4d7f2eb454a 308 Gene3D G3DSA:2.70.70.10 160 308 2.8E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0706 9e89d267baef5b417a24c4d7f2eb454a 308 Gene3D G3DSA:3.10.350.10 59 112 2.7E-5 T 11-10-2018 IPR036779 LysM domain superfamily TP_0706 9e89d267baef5b417a24c4d7f2eb454a 308 Pfam PF01476 LysM domain 66 109 1.2E-5 T 11-10-2018 IPR018392 LysM domain TP_0706 9e89d267baef5b417a24c4d7f2eb454a 308 SUPERFAMILY SSF51261 65 304 3.82E-53 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0980 e56db11a203c4774f7b745352022ec5f 340 SUPERFAMILY SSF51395 21 334 5.49E-70 T 11-10-2018 TP_0980 e56db11a203c4774f7b745352022ec5f 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 104 122 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TP_0980 e56db11a203c4774f7b745352022ec5f 340 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 12 338 8.2E-134 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 TP_0980 e56db11a203c4774f7b745352022ec5f 340 PIRSF PIRSF006621 10 338 8.7E-78 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TP_0980 e56db11a203c4774f7b745352022ec5f 340 Pfam PF01207 Dihydrouridine synthase (Dus) 23 323 1.2E-72 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TP_0980 e56db11a203c4774f7b745352022ec5f 340 Gene3D G3DSA:3.20.20.70 16 267 1.0E-71 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_1007 af17809429c24f15aef8aab822255912 305 SUPERFAMILY SSF69796 44 265 4.45E-65 T 11-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TP_1007 af17809429c24f15aef8aab822255912 305 Pfam PF02511 Thymidylate synthase complementing protein 53 252 4.2E-53 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TP_1007 af17809429c24f15aef8aab822255912 305 Gene3D G3DSA:3.30.1360.170 34 271 7.2E-67 T 11-10-2018 TP_1007 af17809429c24f15aef8aab822255912 305 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 47 266 29.673 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TP_1007 af17809429c24f15aef8aab822255912 305 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 51 257 7.5E-63 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TP_0418 217024f00a22911cc18758e155be5b37 397 Gene3D G3DSA:3.30.70.890 210 373 1.4E-72 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TP_0418 217024f00a22911cc18758e155be5b37 397 SUPERFAMILY SSF54211 4 210 1.37E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0418 217024f00a22911cc18758e155be5b37 397 Pfam PF10509 Galactokinase galactose-binding signature 21 67 8.3E-10 T 11-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TP_0418 217024f00a22911cc18758e155be5b37 397 Gene3D G3DSA:3.30.230.10 32 209 1.4E-72 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_0418 217024f00a22911cc18758e155be5b37 397 PRINTS PR00959 Mevalonate kinase family signature 35 59 8.6E-17 T 11-10-2018 TP_0418 217024f00a22911cc18758e155be5b37 397 PRINTS PR00959 Mevalonate kinase family signature 344 361 8.6E-17 T 11-10-2018 TP_0418 217024f00a22911cc18758e155be5b37 397 PRINTS PR00959 Mevalonate kinase family signature 127 149 8.6E-17 T 11-10-2018 TP_0418 217024f00a22911cc18758e155be5b37 397 Pfam PF08544 GHMP kinases C terminal 290 364 1.9E-6 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain TP_0418 217024f00a22911cc18758e155be5b37 397 PIRSF PIRSF000530 2 397 2.3E-97 T 11-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TP_0418 217024f00a22911cc18758e155be5b37 397 SUPERFAMILY SSF55060 214 396 4.93E-30 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TP_0019 0733dd679b8f68822b929e79d7cec022 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 27.257 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 TP_0019 0733dd679b8f68822b929e79d7cec022 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 TP_0019 0733dd679b8f68822b929e79d7cec022 162 Gene3D G3DSA:1.10.287.180 6 78 5.3E-19 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TP_0019 0733dd679b8f68822b929e79d7cec022 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 158 2.1E-22 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TP_0019 0733dd679b8f68822b929e79d7cec022 162 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 9 158 2.1E-51 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 TP_0019 0733dd679b8f68822b929e79d7cec022 162 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 1.2E-18 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 TP_0019 0733dd679b8f68822b929e79d7cec022 162 SUPERFAMILY SSF46557 8 81 1.83E-18 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TP_0019 0733dd679b8f68822b929e79d7cec022 162 PIRSF PIRSF006092 1 161 5.9E-48 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 TP_0019 0733dd679b8f68822b929e79d7cec022 162 SUPERFAMILY SSF54534 86 157 9.42E-17 T 11-10-2018 TP_0019 0733dd679b8f68822b929e79d7cec022 162 Gene3D G3DSA:3.10.50.30 79 161 1.9E-19 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TP_0019 0733dd679b8f68822b929e79d7cec022 162 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 123 139 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 Gene3D G3DSA:3.40.50.300 3 181 8.6E-70 T 11-10-2018 TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 SUPERFAMILY SSF52540 7 517 1.82E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 SMART SM00847 402 494 3.2E-17 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 SMART SM00487 5 189 3.6E-23 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 Pfam PF00270 DEAD/DEAH box helicase 15 163 7.0E-7 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 122 131 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 Gene3D G3DSA:3.40.50.300 183 359 2.6E-56 T 11-10-2018 TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 554 625 7.0E-9 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 Pfam PF04408 Helicase associated domain (HA2) 403 494 4.1E-14 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 Gene3D G3DSA:1.20.120.1080 384 485 6.7E-11 T 11-10-2018 TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 Pfam PF00271 Helicase conserved C-terminal domain 211 341 2.2E-18 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0526 6a01bb1f2b7aba25eec1119096fa8d05 668 SMART SM00490 245 342 6.7E-21 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Gene3D G3DSA:3.30.420.110 122 265 1.7E-23 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 SUPERFAMILY SSF52540 573 808 2.31E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 SUPERFAMILY SSF48334 271 571 1.06E-78 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 SUPERFAMILY SSF55271 4 109 3.27E-33 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Pfam PF05192 MutS domain III 273 565 1.5E-38 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 8 881 1.4E-248 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 SUPERFAMILY SSF53150 111 284 1.09E-28 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 876 23.095 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Pfam PF00488 MutS domain V 623 807 9.4E-81 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Gene3D G3DSA:1.10.1420.10 270 565 5.5E-87 T 11-10-2018 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 PIRSF PIRSF037677 2 853 4.4E-161 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Pfam PF05188 MutS domain II 122 256 1.4E-22 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Pfam PF01624 MutS domain I 8 113 8.9E-35 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Pfam PF05190 MutS family domain IV 434 524 2.4E-25 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Gene3D G3DSA:1.10.1420.10 406 541 5.5E-87 T 11-10-2018 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 SMART SM00534 619 804 5.1E-119 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 SMART SM00533 288 597 6.6E-113 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Gene3D G3DSA:3.40.1170.10 1 115 1.3E-36 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 Gene3D G3DSA:3.40.50.300 576 864 5.2E-96 T 11-10-2018 TP_0328 8749a7675e78dccbc51388e4a6aa3c75 900 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 700 716 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 139 222 1.0E-35 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 11 374 1.9E-98 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 PIRSF PIRSF006205 10 382 5.6E-127 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 Pfam PF13288 DXP reductoisomerase C-terminal domain 254 370 7.7E-31 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 SUPERFAMILY SSF69055 287 378 3.14E-24 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 SUPERFAMILY SSF55347 119 257 1.37E-51 T 11-10-2018 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 SUPERFAMILY SSF51735 11 143 4.42E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0601 7a659e6d13208dc4669959e151aa7c81 383 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 13 375 40.119 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 Gene3D G3DSA:1.10.1740.10 295 379 6.6E-23 T 11-10-2018 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 Gene3D G3DSA:3.40.50.720 9 143 1.2E-27 T 11-10-2018 TP_0601 7a659e6d13208dc4669959e151aa7c81 383 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 13 124 1.4E-19 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TP_0200 8e74ed8806983238899d858f3c14238d 103 SMART SM00739 6 33 1.7E-5 T 11-10-2018 IPR005824 KOW TP_0200 8e74ed8806983238899d858f3c14238d 103 SUPERFAMILY SSF50104 3 102 1.38E-31 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TP_0200 8e74ed8806983238899d858f3c14238d 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 10 27 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0200 8e74ed8806983238899d858f3c14238d 103 Gene3D G3DSA:2.30.30.30 1 102 4.0E-35 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TP_0200 8e74ed8806983238899d858f3c14238d 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 5 102 1.6E-36 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0200 8e74ed8806983238899d858f3c14238d 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 5 97 20.749 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0200 8e74ed8806983238899d858f3c14238d 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 102 2.7E-22 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0200 8e74ed8806983238899d858f3c14238d 103 Pfam PF00467 KOW motif 9 39 2.0E-7 T 11-10-2018 IPR005824 KOW TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 SMART SM00475 4 264 4.3E-140 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 SMART SM00479 391 590 0.0018 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 SMART SM00482 755 961 4.6E-119 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 SUPERFAMILY SSF56672 596 997 2.67E-143 T 11-10-2018 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 SMART SM00474 371 589 8.2E-44 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Gene3D G3DSA:3.30.420.10 368 612 1.3E-59 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 172 1.9E-45 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 792 5.5E-72 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 PRINTS PR00868 DNA-polymerase family A (pol I) signature 914 930 5.5E-72 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 PRINTS PR00868 DNA-polymerase family A (pol I) signature 882 893 5.5E-72 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 762 5.5E-72 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 PRINTS PR00868 DNA-polymerase family A (pol I) signature 944 957 5.5E-72 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 PRINTS PR00868 DNA-polymerase family A (pol I) signature 724 746 5.5E-72 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 PRINTS PR00868 DNA-polymerase family A (pol I) signature 860 871 5.5E-72 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 PRINTS PR00868 DNA-polymerase family A (pol I) signature 799 812 5.5E-72 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 PRINTS PR00868 DNA-polymerase family A (pol I) signature 823 848 5.5E-72 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 SUPERFAMILY SSF47807 174 288 9.12E-26 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Pfam PF00476 DNA polymerase family A 622 995 1.3E-141 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Gene3D G3DSA:1.20.1060.10 614 727 4.8E-35 T 11-10-2018 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 SMART SM00279 176 211 8.4E-15 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Gene3D G3DSA:1.10.150.20 778 921 1.2E-101 T 11-10-2018 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 TIGRFAM TIGR00593 pola: DNA polymerase I 7 997 0.0 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Gene3D G3DSA:3.40.50.1010 7 260 5.3E-83 T 11-10-2018 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Gene3D G3DSA:3.30.70.370 733 993 1.2E-101 T 11-10-2018 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 ProSitePatterns PS00447 DNA polymerase family A signature. 823 842 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 261 4.5E-26 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 SUPERFAMILY SSF53098 369 589 2.57E-40 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Pfam PF01612 3'-5' exonuclease 427 589 1.8E-39 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 Gene3D G3DSA:1.10.150.20 177 249 5.3E-83 T 11-10-2018 TP_0105 b15ed1680df1f29cb13b7a4fde224123 997 SUPERFAMILY SSF88723 3 165 2.8E-45 T 11-10-2018 IPR029060 PIN-like domain superfamily TP_0441 13098a249156fd349e379085423a4514 305 Gene3D G3DSA:3.40.50.10330 59 292 3.7E-67 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TP_0441 13098a249156fd349e379085423a4514 305 SUPERFAMILY SSF111331 19 292 5.23E-71 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TP_0441 13098a249156fd349e379085423a4514 305 Gene3D G3DSA:2.60.200.30 131 268 3.7E-67 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TP_0441 13098a249156fd349e379085423a4514 305 Hamap MF_00361 NAD kinase [nadK]. 18 291 27.386 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TP_0441 13098a249156fd349e379085423a4514 305 Pfam PF01513 ATP-NAD kinase 64 274 5.5E-49 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TP_0369 141afac7e115fde8f7307ef57b099f80 516 Gene3D G3DSA:1.25.40.10 424 513 1.3E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0369 141afac7e115fde8f7307ef57b099f80 516 Pfam PF13525 Outer membrane lipoprotein 435 511 1.2E-8 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like TP_0369 141afac7e115fde8f7307ef57b099f80 516 SUPERFAMILY SSF48452 424 495 9.66E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0381 2c016b4d9d0ed0b01593eff3c9e17c67 238 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 15 222 4.6E-28 T 11-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 TP_0381 2c016b4d9d0ed0b01593eff3c9e17c67 238 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 11 229 2.6E-68 T 11-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 TP_0792 6e3de76fb1dc649cfe8bbb6824c03667 286 Gene3D G3DSA:1.20.1330.10 48 236 5.4E-56 T 11-10-2018 TP_0792 6e3de76fb1dc649cfe8bbb6824c03667 286 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 285 3.2E-29 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TP_0792 6e3de76fb1dc649cfe8bbb6824c03667 286 Gene3D G3DSA:1.10.8.410 237 286 3.0E-28 T 11-10-2018 TP_0792 6e3de76fb1dc649cfe8bbb6824c03667 286 SUPERFAMILY SSF64518 1 286 6.41E-87 T 11-10-2018 TP_0792 6e3de76fb1dc649cfe8bbb6824c03667 286 PRINTS PR00207 Flagellin signature 35 52 6.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TP_0792 6e3de76fb1dc649cfe8bbb6824c03667 286 PRINTS PR00207 Flagellin signature 109 132 6.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TP_0792 6e3de76fb1dc649cfe8bbb6824c03667 286 PRINTS PR00207 Flagellin signature 74 93 6.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TP_0792 6e3de76fb1dc649cfe8bbb6824c03667 286 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 2.7E-37 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TP_0937 be1a549e87b8791e43ee95d2b9e6e41d 211 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 28 186 1.4E-20 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 TP_0937 be1a549e87b8791e43ee95d2b9e6e41d 211 SUPERFAMILY SSF56300 27 190 8.09E-32 T 11-10-2018 TP_0937 be1a549e87b8791e43ee95d2b9e6e41d 211 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 28 183 6.3E-20 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 TP_0937 be1a549e87b8791e43ee95d2b9e6e41d 211 Gene3D G3DSA:3.60.21.10 23 202 6.0E-31 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TP_0585 865a08548c332a39d04dcc8a9b3d062e 547 SUPERFAMILY SSF53850 41 536 1.01E-88 T 11-10-2018 TP_0585 865a08548c332a39d04dcc8a9b3d062e 547 PIRSF PIRSF002741 3 537 5.9E-64 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TP_0585 865a08548c332a39d04dcc8a9b3d062e 547 Gene3D G3DSA:3.40.190.10 54 516 1.7E-96 T 11-10-2018 TP_0585 865a08548c332a39d04dcc8a9b3d062e 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 458 1.5E-61 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain TP_0585 865a08548c332a39d04dcc8a9b3d062e 547 Gene3D G3DSA:3.90.76.10 72 207 1.7E-96 T 11-10-2018 TP_0585 865a08548c332a39d04dcc8a9b3d062e 547 Gene3D G3DSA:3.10.105.10 304 507 1.7E-96 T 11-10-2018 TP_0546 9bacf991050c7362d987dd8b0001211f 666 SUPERFAMILY SSF50494 281 456 1.14E-42 T 11-10-2018 IPR009003 Peptidase S1, PA clan TP_0546 9bacf991050c7362d987dd8b0001211f 666 Gene3D G3DSA:2.40.10.10 358 466 1.0E-29 T 11-10-2018 TP_0546 9bacf991050c7362d987dd8b0001211f 666 Pfam PF13365 Trypsin-like peptidase domain 287 426 7.7E-26 T 11-10-2018 TP_0546 9bacf991050c7362d987dd8b0001211f 666 Gene3D G3DSA:2.30.42.10 467 556 8.5E-8 T 11-10-2018 TP_0546 9bacf991050c7362d987dd8b0001211f 666 SUPERFAMILY SSF50156 484 574 5.6E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TP_0546 9bacf991050c7362d987dd8b0001211f 666 PRINTS PR00834 HtrA/DegQ protease family signature 500 512 1.8E-23 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0546 9bacf991050c7362d987dd8b0001211f 666 PRINTS PR00834 HtrA/DegQ protease family signature 367 391 1.8E-23 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0546 9bacf991050c7362d987dd8b0001211f 666 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.8E-23 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0546 9bacf991050c7362d987dd8b0001211f 666 PRINTS PR00834 HtrA/DegQ protease family signature 400 417 1.8E-23 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0546 9bacf991050c7362d987dd8b0001211f 666 Gene3D G3DSA:2.40.10.10 228 354 2.8E-15 T 11-10-2018 TP_0990 499daeac8865312edec3611036673dc5 1033 SMART SM00028 767 800 35.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0990 499daeac8865312edec3611036673dc5 1033 SMART SM00028 722 755 18.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0990 499daeac8865312edec3611036673dc5 1033 SMART SM00028 848 881 0.054 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0990 499daeac8865312edec3611036673dc5 1033 SUPERFAMILY SSF48452 495 756 2.18E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0990 499daeac8865312edec3611036673dc5 1033 Gene3D G3DSA:1.25.40.10 661 984 3.6E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0990 499daeac8865312edec3611036673dc5 1033 Pfam PF13174 Tetratricopeptide repeat 723 753 0.12 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0990 499daeac8865312edec3611036673dc5 1033 Gene3D G3DSA:1.25.40.10 486 660 7.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0990 499daeac8865312edec3611036673dc5 1033 SUPERFAMILY SSF48452 698 911 4.17E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0990 499daeac8865312edec3611036673dc5 1033 Pfam PF13432 Tetratricopeptide repeat 828 881 7.4E-5 T 11-10-2018 TP_0682 4f578a648afdf6184b760d4781a8acb3 200 Pfam PF01728 FtsJ-like methyltransferase 19 192 4.2E-40 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TP_0682 4f578a648afdf6184b760d4781a8acb3 200 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 3 195 22.449 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TP_0682 4f578a648afdf6184b760d4781a8acb3 200 PIRSF PIRSF005461 1 200 1.2E-59 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TP_0682 4f578a648afdf6184b760d4781a8acb3 200 SUPERFAMILY SSF53335 18 194 9.78E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0682 4f578a648afdf6184b760d4781a8acb3 200 Gene3D G3DSA:3.40.50.150 15 198 8.1E-44 T 11-10-2018 TP_0841 ab1b4f4bf66c79802125996606816be7 485 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 7.5E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0841 ab1b4f4bf66c79802125996606816be7 485 PRINTS PR00834 HtrA/DegQ protease family signature 185 209 7.5E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0841 ab1b4f4bf66c79802125996606816be7 485 PRINTS PR00834 HtrA/DegQ protease family signature 329 341 7.5E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0841 ab1b4f4bf66c79802125996606816be7 485 PRINTS PR00834 HtrA/DegQ protease family signature 143 163 7.5E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0841 ab1b4f4bf66c79802125996606816be7 485 PRINTS PR00834 HtrA/DegQ protease family signature 122 134 7.5E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0841 ab1b4f4bf66c79802125996606816be7 485 PRINTS PR00834 HtrA/DegQ protease family signature 242 259 7.5E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0841 ab1b4f4bf66c79802125996606816be7 485 Gene3D G3DSA:2.30.42.10 283 388 2.6E-19 T 11-10-2018 TP_0841 ab1b4f4bf66c79802125996606816be7 485 Pfam PF13180 PDZ domain 288 379 2.9E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0841 ab1b4f4bf66c79802125996606816be7 485 Pfam PF13180 PDZ domain 417 479 1.0E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0841 ab1b4f4bf66c79802125996606816be7 485 Pfam PF13365 Trypsin-like peptidase domain 110 249 1.6E-30 T 11-10-2018 TP_0841 ab1b4f4bf66c79802125996606816be7 485 SMART SM00228 397 475 1.0E-5 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0841 ab1b4f4bf66c79802125996606816be7 485 SMART SM00228 288 371 2.8E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0841 ab1b4f4bf66c79802125996606816be7 485 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 43 480 7.8E-142 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TP_0841 ab1b4f4bf66c79802125996606816be7 485 SUPERFAMILY SSF50156 270 379 6.84E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TP_0841 ab1b4f4bf66c79802125996606816be7 485 Gene3D G3DSA:2.40.10.120 43 282 9.5E-67 T 11-10-2018 TP_0841 ab1b4f4bf66c79802125996606816be7 485 Gene3D G3DSA:2.30.42.60 389 484 1.9E-15 T 11-10-2018 TP_0841 ab1b4f4bf66c79802125996606816be7 485 SUPERFAMILY SSF50156 395 479 1.84E-14 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TP_0841 ab1b4f4bf66c79802125996606816be7 485 SUPERFAMILY SSF50494 44 280 8.77E-57 T 11-10-2018 IPR009003 Peptidase S1, PA clan TP_0701 1d13c6156eab73d7c489fe72fd0c5efc 67 SMART SM01409 7 59 0.0042 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TP_0701 1d13c6156eab73d7c489fe72fd0c5efc 67 Pfam PF01192 RNA polymerase Rpb6 8 58 1.3E-4 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TP_0701 1d13c6156eab73d7c489fe72fd0c5efc 67 SUPERFAMILY SSF63562 5 64 1.22E-6 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TP_0908 962cd4247d68ad941e9649b3792fab94 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 92.325 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TP_0908 962cd4247d68ad941e9649b3792fab94 250 Gene3D G3DSA:3.40.1280.10 1 168 3.2E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TP_0908 962cd4247d68ad941e9649b3792fab94 250 SUPERFAMILY SSF75217 1 241 2.03E-87 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TP_0908 962cd4247d68ad941e9649b3792fab94 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 217 8.3E-61 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TP_0908 962cd4247d68ad941e9649b3792fab94 250 Gene3D G3DSA:1.10.1270.20 169 246 1.7E-26 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TP_0908 962cd4247d68ad941e9649b3792fab94 250 PIRSF PIRSF000386 1 243 1.9E-90 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TP_0908 962cd4247d68ad941e9649b3792fab94 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 224 4.4E-90 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TP_1022 93b859c3d9823e2c217db9b31045a768 455 SMART SM00382 89 240 5.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_1022 93b859c3d9823e2c217db9b31045a768 455 Hamap MF_01498 DNA repair protein RadA [radA]. 22 450 39.786 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TP_1022 93b859c3d9823e2c217db9b31045a768 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 332 424 2.3E-11 T 11-10-2018 TP_1022 93b859c3d9823e2c217db9b31045a768 455 Gene3D G3DSA:3.30.230.10 292 453 4.2E-16 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_1022 93b859c3d9823e2c217db9b31045a768 455 SUPERFAMILY SSF54211 250 443 2.39E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_1022 93b859c3d9823e2c217db9b31045a768 455 SUPERFAMILY SSF52540 67 280 2.79E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_1022 93b859c3d9823e2c217db9b31045a768 455 PRINTS PR01874 DNA repair protein radA signature 170 194 4.5E-74 T 11-10-2018 TP_1022 93b859c3d9823e2c217db9b31045a768 455 PRINTS PR01874 DNA repair protein radA signature 120 137 4.5E-74 T 11-10-2018 TP_1022 93b859c3d9823e2c217db9b31045a768 455 PRINTS PR01874 DNA repair protein radA signature 243 269 4.5E-74 T 11-10-2018 TP_1022 93b859c3d9823e2c217db9b31045a768 455 PRINTS PR01874 DNA repair protein radA signature 11 35 4.5E-74 T 11-10-2018 TP_1022 93b859c3d9823e2c217db9b31045a768 455 PRINTS PR01874 DNA repair protein radA signature 81 109 4.5E-74 T 11-10-2018 TP_1022 93b859c3d9823e2c217db9b31045a768 455 PRINTS PR01874 DNA repair protein radA signature 209 237 4.5E-74 T 11-10-2018 TP_1022 93b859c3d9823e2c217db9b31045a768 455 PRINTS PR01874 DNA repair protein radA signature 318 341 4.5E-74 T 11-10-2018 TP_1022 93b859c3d9823e2c217db9b31045a768 455 Pfam PF06745 KaiC 73 145 8.5E-10 T 11-10-2018 IPR014774 KaiC-like domain TP_1022 93b859c3d9823e2c217db9b31045a768 455 Gene3D G3DSA:3.40.50.300 64 278 4.7E-39 T 11-10-2018 TP_1022 93b859c3d9823e2c217db9b31045a768 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 428 1.7E-132 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 207 224 5.9E-13 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 85 104 5.9E-13 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 310 322 5.9E-13 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 248 264 5.9E-13 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 174 190 5.9E-13 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 Gene3D G3DSA:1.10.10.480 326 400 2.4E-227 T 11-10-2018 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 Gene3D G3DSA:3.40.50.460 228 543 2.4E-227 T 11-10-2018 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 SUPERFAMILY SSF53784 6 556 9.42E-154 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 PIRSF PIRSF005677 1 570 2.7E-258 T 11-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 Hamap MF_01980 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 561 45.022 T 11-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 Gene3D G3DSA:3.40.50.450 10 509 2.4E-227 T 11-10-2018 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 TIGRFAM TIGR02477 PFKA_PPi: diphosphate--fructose-6-phosphate 1-phosphotransferase 6 558 2.0E-239 T 11-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TP_0542 e16ec7d6ad99e098cd46a9d2c55b748c 573 Pfam PF00365 Phosphofructokinase 82 335 2.5E-37 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0808 99393ca4f87f5fa24bf39353e08cfcc3 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 76 6.0E-18 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TP_0808 99393ca4f87f5fa24bf39353e08cfcc3 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 19.708 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TP_0808 99393ca4f87f5fa24bf39353e08cfcc3 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 2.6E-28 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TP_0808 99393ca4f87f5fa24bf39353e08cfcc3 78 SUPERFAMILY SSF47336 2 76 1.96E-20 T 11-10-2018 IPR036736 ACP-like superfamily TP_0808 99393ca4f87f5fa24bf39353e08cfcc3 78 Pfam PF00550 Phosphopantetheine attachment site 8 73 1.6E-15 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain TP_0808 99393ca4f87f5fa24bf39353e08cfcc3 78 Gene3D G3DSA:1.10.1200.10 1 78 1.7E-24 T 11-10-2018 IPR036736 ACP-like superfamily TP_0622 d31540b823662255e0489f933af589d8 593 SUPERFAMILY SSF48452 355 470 4.36E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0622 d31540b823662255e0489f933af589d8 593 Gene3D G3DSA:1.25.40.10 406 586 1.2E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0622 d31540b823662255e0489f933af589d8 593 SUPERFAMILY SSF48452 506 589 2.4E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0622 d31540b823662255e0489f933af589d8 593 Gene3D G3DSA:1.25.40.10 183 401 4.6E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0622 d31540b823662255e0489f933af589d8 593 Pfam PF13432 Tetratricopeptide repeat 308 371 0.0017 T 11-10-2018 TP_0622 d31540b823662255e0489f933af589d8 593 Pfam PF13432 Tetratricopeptide repeat 418 473 0.017 T 11-10-2018 TP_0622 d31540b823662255e0489f933af589d8 593 SUPERFAMILY SSF48452 198 386 1.28E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0343 e62e699f10b2a4502c5fcc7763a86dde 277 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 161 3.8E-14 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TP_0343 e62e699f10b2a4502c5fcc7763a86dde 277 Pfam PF00633 Helix-hairpin-helix motif 110 135 5.7E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TP_0343 e62e699f10b2a4502c5fcc7763a86dde 277 Gene3D G3DSA:1.10.340.30 28 140 1.1E-55 T 11-10-2018 TP_0343 e62e699f10b2a4502c5fcc7763a86dde 277 SMART SM00478 46 194 2.7E-47 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TP_0343 e62e699f10b2a4502c5fcc7763a86dde 277 SUPERFAMILY SSF48150 11 198 9.07E-50 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TP_0343 e62e699f10b2a4502c5fcc7763a86dde 277 ProSitePatterns PS01155 Endonuclease III family signature. 109 138 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 TP_0343 e62e699f10b2a4502c5fcc7763a86dde 277 Gene3D G3DSA:1.10.1670.10 19 197 1.1E-55 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TP_0379 a2e73f6212557f702cf398a51951464a 916 Gene3D G3DSA:3.40.50.300 424 641 2.4E-90 T 11-10-2018 TP_0379 a2e73f6212557f702cf398a51951464a 916 SMART SM00957 7 409 4.1E-256 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TP_0379 a2e73f6212557f702cf398a51951464a 916 ProSitePatterns PS01312 SecA family signature. 507 522 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 TP_0379 a2e73f6212557f702cf398a51951464a 916 Pfam PF01043 SecA preprotein cross-linking domain 234 365 2.4E-33 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TP_0379 a2e73f6212557f702cf398a51951464a 916 Pfam PF07517 SecA DEAD-like domain 10 408 8.3E-125 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TP_0379 a2e73f6212557f702cf398a51951464a 916 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 29 839 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TP_0379 a2e73f6212557f702cf398a51951464a 916 Gene3D G3DSA:1.10.3060.10 643 854 9.4E-54 T 11-10-2018 TP_0379 a2e73f6212557f702cf398a51951464a 916 Pfam PF02810 SEC-C motif 898 916 4.3E-9 T 11-10-2018 IPR004027 SEC-C motif TP_0379 a2e73f6212557f702cf398a51951464a 916 SUPERFAMILY SSF81767 228 373 3.79E-36 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 TP_0379 a2e73f6212557f702cf398a51951464a 916 Gene3D G3DSA:3.10.450.50 861 916 6.0E-9 T 11-10-2018 TP_0379 a2e73f6212557f702cf398a51951464a 916 SUPERFAMILY SSF52540 10 422 2.02E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0379 a2e73f6212557f702cf398a51951464a 916 Hamap MF_01382 Protein translocase subunit SecA [secA]. 6 853 19.543 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TP_0379 a2e73f6212557f702cf398a51951464a 916 PRINTS PR00906 SecA protein signature 118 128 7.5E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TP_0379 a2e73f6212557f702cf398a51951464a 916 PRINTS PR00906 SecA protein signature 102 116 7.5E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TP_0379 a2e73f6212557f702cf398a51951464a 916 PRINTS PR00906 SecA protein signature 64 88 7.5E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TP_0379 a2e73f6212557f702cf398a51951464a 916 PRINTS PR00906 SecA protein signature 171 191 7.5E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TP_0379 a2e73f6212557f702cf398a51951464a 916 PRINTS PR00906 SecA protein signature 346 368 7.5E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TP_0379 a2e73f6212557f702cf398a51951464a 916 PRINTS PR00906 SecA protein signature 420 433 7.5E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TP_0379 a2e73f6212557f702cf398a51951464a 916 PRINTS PR00906 SecA protein signature 383 400 7.5E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TP_0379 a2e73f6212557f702cf398a51951464a 916 Pfam PF07516 SecA Wing and Scaffold domain 639 850 1.0E-54 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TP_0379 a2e73f6212557f702cf398a51951464a 916 Gene3D G3DSA:3.40.50.300 25 422 2.1E-161 T 11-10-2018 TP_0379 a2e73f6212557f702cf398a51951464a 916 Gene3D G3DSA:3.90.1440.10 230 375 2.1E-161 T 11-10-2018 TP_0379 a2e73f6212557f702cf398a51951464a 916 SMART SM00958 229 365 5.5E-59 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TP_0379 a2e73f6212557f702cf398a51951464a 916 SUPERFAMILY SSF81886 642 906 1.26E-63 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily TP_0379 a2e73f6212557f702cf398a51951464a 916 SUPERFAMILY SSF52540 424 640 1.16E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 SMART SM00028 383 416 0.42 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 SMART SM00028 315 348 1.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 SMART SM00028 723 756 1.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 SMART SM00028 656 689 0.022 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 SMART SM00028 583 616 56.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 Gene3D G3DSA:1.25.40.10 379 466 1.4E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 Pfam PF13432 Tetratricopeptide repeat 320 366 1.5E-5 T 11-10-2018 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 Gene3D G3DSA:1.25.40.10 469 649 4.2E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 Gene3D G3DSA:1.25.40.10 650 804 1.3E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 SUPERFAMILY SSF48452 468 625 3.0E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 SUPERFAMILY SSF48452 321 516 2.18E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 SUPERFAMILY SSF48452 657 777 3.53E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0920 7dd621f9758f66a19ef86d82f4e6b838 809 Gene3D G3DSA:1.25.40.10 314 373 2.3E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0472 e8649ed152cb448cfadc8782185c4a62 691 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 17 336 1.2E-96 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TP_0472 e8649ed152cb448cfadc8782185c4a62 691 SUPERFAMILY SSF82771 21 103 2.62E-19 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TP_0472 e8649ed152cb448cfadc8782185c4a62 691 Gene3D G3DSA:1.10.150.20 602 659 9.9E-9 T 11-10-2018 TP_0472 e8649ed152cb448cfadc8782185c4a62 691 Gene3D G3DSA:3.40.1440.10 8 105 1.0E-29 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TP_0472 e8649ed152cb448cfadc8782185c4a62 691 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 445 594 1.6E-46 T 11-10-2018 IPR001162 UvrC family homology region TP_0472 e8649ed152cb448cfadc8782185c4a62 691 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 659 27.95 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TP_0472 e8649ed152cb448cfadc8782185c4a62 691 Gene3D G3DSA:3.30.420.340 438 601 1.1E-54 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily TP_0472 e8649ed152cb448cfadc8782185c4a62 691 SMART SM00465 21 101 7.1E-23 T 11-10-2018 IPR000305 GIY-YIG endonuclease TP_0472 e8649ed152cb448cfadc8782185c4a62 691 Pfam PF02151 UvrB/uvrC motif 208 237 7.2E-7 T 11-10-2018 IPR001943 UVR domain GO:0005515 TP_0472 e8649ed152cb448cfadc8782185c4a62 691 SUPERFAMILY SSF46600 191 241 3.92E-10 T 11-10-2018 IPR036876 UVR domain superfamily TP_0472 e8649ed152cb448cfadc8782185c4a62 691 SUPERFAMILY SSF47781 553 663 7.63E-15 T 11-10-2018 IPR010994 RuvA domain 2-like TP_0472 e8649ed152cb448cfadc8782185c4a62 691 Pfam PF01541 GIY-YIG catalytic domain 22 96 1.4E-7 T 11-10-2018 IPR000305 GIY-YIG endonuclease TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 635 39.209 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 635 2.9E-255 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 SUPERFAMILY SSF53697 245 635 1.02E-98 T 11-10-2018 TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 Gene3D G3DSA:3.40.50.10490 461 620 1.8E-128 T 11-10-2018 TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 Pfam PF01380 SIS domain 476 615 2.3E-19 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 Pfam PF01380 SIS domain 306 430 6.1E-28 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 SUPERFAMILY SSF56235 2 236 1.37E-67 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 Pfam PF13522 Glutamine amidotransferase domain 67 182 3.1E-17 T 11-10-2018 TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 Gene3D G3DSA:3.40.50.10490 250 634 1.8E-128 T 11-10-2018 TP_0861 2ff6fcb8f2f5e916b7d382d0675ed7ed 635 Gene3D G3DSA:3.60.20.10 2 241 2.3E-70 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TP_0296 cf78efc05ce11b27061257118e7932b8 211 Pfam PF01121 Dephospho-CoA kinase 7 170 1.3E-18 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TP_0296 cf78efc05ce11b27061257118e7932b8 211 Gene3D G3DSA:3.40.50.300 5 207 6.0E-33 T 11-10-2018 TP_0296 cf78efc05ce11b27061257118e7932b8 211 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 5 209 14.601 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TP_0296 cf78efc05ce11b27061257118e7932b8 211 SUPERFAMILY SSF52540 7 204 1.67E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0497 75600087da819a4e010bd1eec514e64c 344 SUPERFAMILY SSF53067 147 328 2.0E-49 T 11-10-2018 TP_0497 75600087da819a4e010bd1eec514e64c 344 SUPERFAMILY SSF53067 7 144 8.1E-36 T 11-10-2018 TP_0497 75600087da819a4e010bd1eec514e64c 344 Gene3D G3DSA:3.30.420.40 11 324 8.3E-124 T 11-10-2018 TP_0497 75600087da819a4e010bd1eec514e64c 344 Gene3D G3DSA:3.90.640.10 183 256 8.3E-124 T 11-10-2018 TP_0497 75600087da819a4e010bd1eec514e64c 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 8.9E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TP_0497 75600087da819a4e010bd1eec514e64c 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 8.9E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TP_0497 75600087da819a4e010bd1eec514e64c 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 8.9E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TP_0497 75600087da819a4e010bd1eec514e64c 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 8.9E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TP_0497 75600087da819a4e010bd1eec514e64c 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 8.9E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TP_0497 75600087da819a4e010bd1eec514e64c 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 333 6.1E-163 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TP_0497 75600087da819a4e010bd1eec514e64c 344 Pfam PF06723 MreB/Mbl protein 9 332 3.3E-144 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TP_0497 75600087da819a4e010bd1eec514e64c 344 Gene3D G3DSA:3.30.420.40 151 314 8.3E-124 T 11-10-2018 TP_0492 ca241360727a863f35cdacec58962dbd 605 Pfam PF13662 Toprim domain 258 333 5.8E-14 T 11-10-2018 IPR006171 TOPRIM domain TP_0492 ca241360727a863f35cdacec58962dbd 605 Gene3D G3DSA:3.90.580.10 1 100 2.1E-36 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 TP_0492 ca241360727a863f35cdacec58962dbd 605 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 249 1.2E-33 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal TP_0492 ca241360727a863f35cdacec58962dbd 605 SUPERFAMILY SSF57783 3 98 6.29E-34 T 11-10-2018 TP_0492 ca241360727a863f35cdacec58962dbd 605 Gene3D G3DSA:3.40.1360.10 239 362 5.2E-33 T 11-10-2018 TP_0492 ca241360727a863f35cdacec58962dbd 605 SMART SM00493 257 328 1.9E-18 T 11-10-2018 IPR006171 TOPRIM domain TP_0492 ca241360727a863f35cdacec58962dbd 605 SMART SM00400 35 89 1.3E-26 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TP_0492 ca241360727a863f35cdacec58962dbd 605 SUPERFAMILY SSF56731 115 419 6.93E-83 T 11-10-2018 TP_0492 ca241360727a863f35cdacec58962dbd 605 Pfam PF01807 CHC2 zinc finger 5 99 2.5E-37 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TP_0492 ca241360727a863f35cdacec58962dbd 605 TIGRFAM TIGR01391 dnaG: DNA primase 3 413 1.1E-139 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 TP_0492 ca241360727a863f35cdacec58962dbd 605 PIRSF PIRSF002811 1 598 1.3E-185 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TP_0492 ca241360727a863f35cdacec58962dbd 605 Gene3D G3DSA:3.90.980.10 109 238 1.3E-33 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily TP_0492 ca241360727a863f35cdacec58962dbd 605 Hamap MF_00974 DNA primase [dnaG]. 3 588 25.107 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TP_0230 1f440064feef3a562612412d5618d52d 657 Gene3D G3DSA:3.40.50.300 121 311 7.4E-63 T 11-10-2018 TP_0230 1f440064feef3a562612412d5618d52d 657 Pfam PF00270 DEAD/DEAH box helicase 136 292 3.0E-13 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TP_0230 1f440064feef3a562612412d5618d52d 657 Hamap MF_00983 Probable primosomal protein N' [priA]. 7 656 24.291 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TP_0230 1f440064feef3a562612412d5618d52d 657 Pfam PF00271 Helicase conserved C-terminal domain 432 517 7.4E-9 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0230 1f440064feef3a562612412d5618d52d 657 SUPERFAMILY SSF52540 150 528 4.91E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0230 1f440064feef3a562612412d5618d52d 657 Gene3D G3DSA:1.10.8.630 5 117 1.2E-22 T 11-10-2018 TP_0230 1f440064feef3a562612412d5618d52d 657 TIGRFAM TIGR00595 priA: primosomal protein N' 153 654 1.9E-218 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TP_0230 1f440064feef3a562612412d5618d52d 657 SMART SM00490 422 518 6.9E-12 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0230 1f440064feef3a562612412d5618d52d 657 SMART SM00487 128 324 1.8E-21 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 Gene3D G3DSA:2.40.50.100 120 195 2.3E-163 T 11-10-2018 TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 11 71 3.8E-11 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 89 213 6.5E-30 T 11-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 SUPERFAMILY SSF50615 8 75 2.88E-11 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 SUPERFAMILY SSF52540 159 447 2.13E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 Gene3D G3DSA:3.40.50.300 78 443 2.3E-163 T 11-10-2018 TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 6 594 48.768 T 11-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 Gene3D G3DSA:2.40.30.20 2 76 6.4E-25 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 Gene3D G3DSA:1.10.1140.10 444 594 3.1E-40 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 SUPERFAMILY SSF47917 458 539 6.28E-19 T 11-10-2018 TP_0529 c1029b2fb823b79da7b0dfed45d12d4f 605 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 222 443 9.4E-87 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 SUPERFAMILY SSF52540 157 549 2.96E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 SUPERFAMILY SSF81923 4 156 2.65E-35 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 4.8E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 4.8E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 4.8E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 4.8E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Gene3D G3DSA:3.40.50.300 149 342 1.1E-74 T 11-10-2018 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 68 6.3E-11 T 11-10-2018 IPR004176 Clp, N-terminal TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.3E-12 T 11-10-2018 IPR004176 Clp, N-terminal TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 873 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 784 864 1.9E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Gene3D G3DSA:1.10.8.60 784 877 4.3E-27 T 11-10-2018 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 SUPERFAMILY SSF52540 550 869 8.16E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 2.7E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Gene3D G3DSA:3.40.50.300 343 548 2.2E-69 T 11-10-2018 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 SMART SM00382 601 743 5.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 SMART SM00382 198 344 5.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Gene3D G3DSA:3.40.50.300 554 783 1.0E-84 T 11-10-2018 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 778 1.9E-54 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 SMART SM01086 784 873 4.7E-35 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TP_0071 6518c70b5cc268951e65a90f4f7a304d 878 Gene3D G3DSA:1.10.1780.10 1 148 5.2E-33 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TP_0051 7f9060d91d16aa0a56d478c4a113a619 351 Gene3D G3DSA:3.30.160.20 209 295 1.6E-97 T 11-10-2018 TP_0051 7f9060d91d16aa0a56d478c4a113a619 351 Pfam PF03462 PCRF domain 9 202 4.6E-65 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TP_0051 7f9060d91d16aa0a56d478c4a113a619 351 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 351 36.275 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TP_0051 7f9060d91d16aa0a56d478c4a113a619 351 SUPERFAMILY SSF75620 8 346 4.97E-124 T 11-10-2018 TP_0051 7f9060d91d16aa0a56d478c4a113a619 351 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 348 6.8E-150 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TP_0051 7f9060d91d16aa0a56d478c4a113a619 351 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TP_0051 7f9060d91d16aa0a56d478c4a113a619 351 Gene3D G3DSA:3.30.70.1660 110 340 1.6E-97 T 11-10-2018 TP_0051 7f9060d91d16aa0a56d478c4a113a619 351 SMART SM00937 63 177 1.8E-49 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TP_0051 7f9060d91d16aa0a56d478c4a113a619 351 Pfam PF00472 RF-1 domain 210 319 1.9E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TP_0037 9edbc985af3f12221cf6be911a28a130 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TP_0037 9edbc985af3f12221cf6be911a28a130 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TP_0037 9edbc985af3f12221cf6be911a28a130 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TP_0037 9edbc985af3f12221cf6be911a28a130 331 Gene3D G3DSA:3.40.50.720 103 298 1.9E-113 T 11-10-2018 TP_0037 9edbc985af3f12221cf6be911a28a130 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 298 1.1E-57 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TP_0037 9edbc985af3f12221cf6be911a28a130 331 SUPERFAMILY SSF52283 2 137 1.76E-31 T 11-10-2018 TP_0037 9edbc985af3f12221cf6be911a28a130 331 Gene3D G3DSA:3.40.50.720 5 318 1.9E-113 T 11-10-2018 TP_0037 9edbc985af3f12221cf6be911a28a130 331 SUPERFAMILY SSF51735 103 300 5.59E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0037 9edbc985af3f12221cf6be911a28a130 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 328 3.1E-25 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 Gene3D G3DSA:3.30.830.10 529 784 2.5E-57 T 11-10-2018 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 Pfam PF05193 Peptidase M16 inactive domain 200 385 1.5E-28 T 11-10-2018 IPR007863 Peptidase M16, C-terminal TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 SUPERFAMILY SSF63411 258 517 6.02E-44 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 Pfam PF08367 Peptidase M16C associated 461 725 2.8E-40 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 SUPERFAMILY SSF63411 530 779 5.29E-42 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 SMART SM01264 460 725 9.1E-67 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 SUPERFAMILY SSF63411 826 970 6.6E-18 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 Gene3D G3DSA:3.30.830.10 810 1017 1.4E-30 T 11-10-2018 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 Pfam PF00675 Insulinase (Peptidase family M16) 55 149 6.1E-7 T 11-10-2018 IPR011765 Peptidase M16, N-terminal TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 SUPERFAMILY SSF63411 10 254 6.81E-39 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 Gene3D G3DSA:3.30.830.10 251 480 1.0E-50 T 11-10-2018 TP_0025 4c0880b699ba54f803255a0e823d92f4 1023 Gene3D G3DSA:3.30.830.10 1 247 1.0E-75 T 11-10-2018 TP_0672 ab85524d4746a123cf485dca30589de2 462 SUPERFAMILY SSF55681 1 367 2.81E-109 T 11-10-2018 TP_0672 ab85524d4746a123cf485dca30589de2 462 Pfam PF03129 Anticodon binding domain 366 453 7.0E-19 T 11-10-2018 IPR004154 Anticodon-binding TP_0672 ab85524d4746a123cf485dca30589de2 462 SUPERFAMILY SSF52954 352 458 1.45E-28 T 11-10-2018 TP_0672 ab85524d4746a123cf485dca30589de2 462 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 1 457 48.254 T 11-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 TP_0672 ab85524d4746a123cf485dca30589de2 462 Gene3D G3DSA:3.30.930.10 1 362 2.5E-121 T 11-10-2018 TP_0672 ab85524d4746a123cf485dca30589de2 462 Gene3D G3DSA:3.40.50.800 363 461 2.3E-27 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TP_0672 ab85524d4746a123cf485dca30589de2 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 171 188 1.7E-51 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TP_0672 ab85524d4746a123cf485dca30589de2 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 118 130 1.7E-51 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TP_0672 ab85524d4746a123cf485dca30589de2 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 402 421 1.7E-51 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TP_0672 ab85524d4746a123cf485dca30589de2 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 139 156 1.7E-51 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TP_0672 ab85524d4746a123cf485dca30589de2 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 188 198 1.7E-51 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TP_0672 ab85524d4746a123cf485dca30589de2 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 300 312 1.7E-51 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TP_0672 ab85524d4746a123cf485dca30589de2 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 20 34 1.7E-51 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TP_0672 ab85524d4746a123cf485dca30589de2 462 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 1 216 1.6E-79 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TP_0623 62ef106525ad73e08c190fbf907b70f9 779 Gene3D G3DSA:3.10.350.10 604 651 3.2E-13 T 11-10-2018 IPR036779 LysM domain superfamily TP_0623 62ef106525ad73e08c190fbf907b70f9 779 Pfam PF01476 LysM domain 607 650 1.0E-11 T 11-10-2018 IPR018392 LysM domain TP_0623 62ef106525ad73e08c190fbf907b70f9 779 Pfam PF01476 LysM domain 734 777 1.4E-11 T 11-10-2018 IPR018392 LysM domain TP_0623 62ef106525ad73e08c190fbf907b70f9 779 SMART SM00257 606 650 9.3E-14 T 11-10-2018 IPR018392 LysM domain TP_0623 62ef106525ad73e08c190fbf907b70f9 779 SMART SM00257 733 777 3.4E-13 T 11-10-2018 IPR018392 LysM domain TP_0623 62ef106525ad73e08c190fbf907b70f9 779 SUPERFAMILY SSF54106 733 777 6.15E-9 T 11-10-2018 TP_0623 62ef106525ad73e08c190fbf907b70f9 779 Gene3D G3DSA:1.10.530.10 372 524 1.5E-26 T 11-10-2018 TP_0623 62ef106525ad73e08c190fbf907b70f9 779 Gene3D G3DSA:3.10.350.10 718 779 2.1E-13 T 11-10-2018 IPR036779 LysM domain superfamily TP_0623 62ef106525ad73e08c190fbf907b70f9 779 SUPERFAMILY SSF54106 605 650 2.09E-9 T 11-10-2018 TP_0623 62ef106525ad73e08c190fbf907b70f9 779 SUPERFAMILY SSF53955 376 521 1.18E-29 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TP_0623 62ef106525ad73e08c190fbf907b70f9 779 Pfam PF01464 Transglycosylase SLT domain 380 491 1.6E-26 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 SUPERFAMILY SSF52540 1 188 8.7E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 Pfam PF05191 Adenylate kinase, active site lid 122 157 2.4E-14 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 TIGRFAM TIGR01351 adk: adenylate kinase 2 205 6.0E-70 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 Hamap MF_00235 Adenylate kinase [adk]. 1 208 39.772 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 Pfam PF00406 Adenylate kinase 6 185 2.6E-43 T 11-10-2018 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 Gene3D G3DSA:3.40.50.300 1 210 6.5E-67 T 11-10-2018 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 PRINTS PR00094 Adenylate kinase signature 172 186 6.0E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 PRINTS PR00094 Adenylate kinase signature 32 46 6.0E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 PRINTS PR00094 Adenylate kinase signature 4 17 6.0E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 PRINTS PR00094 Adenylate kinase signature 81 97 6.0E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TP_0595 517aad61a57bc674ba5b32ec53c490d1 211 PRINTS PR00094 Adenylate kinase signature 155 170 6.0E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TP_0975 7a3be897f2f4dda8b7116bdfc4c03900 274 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 271 35.857 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TP_0975 7a3be897f2f4dda8b7116bdfc4c03900 274 SUPERFAMILY SSF53790 2 77 1.54E-22 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TP_0975 7a3be897f2f4dda8b7116bdfc4c03900 274 Gene3D G3DSA:3.40.1010.10 117 159 8.4E-11 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TP_0975 7a3be897f2f4dda8b7116bdfc4c03900 274 Gene3D G3DSA:3.40.1010.10 1 83 6.2E-24 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TP_0975 7a3be897f2f4dda8b7116bdfc4c03900 274 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 247 1.8E-21 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TP_0975 7a3be897f2f4dda8b7116bdfc4c03900 274 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 130 141 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 TP_0975 7a3be897f2f4dda8b7116bdfc4c03900 274 PIRSF PIRSF005917 1 274 1.0E-100 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TP_0975 7a3be897f2f4dda8b7116bdfc4c03900 274 SUPERFAMILY SSF53790 124 269 2.62E-41 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TP_0975 7a3be897f2f4dda8b7116bdfc4c03900 274 Gene3D G3DSA:3.30.950.10 160 273 1.2E-28 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TP_0374 d4d2744e268833887e60c869baf5a489 791 SUPERFAMILY SSF48452 66 194 1.05E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0374 d4d2744e268833887e60c869baf5a489 791 Gene3D G3DSA:1.25.40.10 55 199 1.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0991 84a47d0190bbb7b7775a14e9c01ce8a3 52 PRINTS PR00163 Rubredoxin signature 3 19 2.4E-9 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 TP_0991 84a47d0190bbb7b7775a14e9c01ce8a3 52 PRINTS PR00163 Rubredoxin signature 33 49 2.4E-9 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 TP_0991 84a47d0190bbb7b7775a14e9c01ce8a3 52 Gene3D G3DSA:2.20.28.10 1 52 7.8E-23 T 11-10-2018 TP_0991 84a47d0190bbb7b7775a14e9c01ce8a3 52 Pfam PF00301 Rubredoxin 4 49 9.0E-23 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 TP_0991 84a47d0190bbb7b7775a14e9c01ce8a3 52 PIRSF PIRSF000071 1 52 2.0E-23 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 TP_0991 84a47d0190bbb7b7775a14e9c01ce8a3 52 SUPERFAMILY SSF57802 1 51 6.56E-20 T 11-10-2018 TP_0991 84a47d0190bbb7b7775a14e9c01ce8a3 52 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 TP_0265 5f4bf4379caeee36047fc4e7269fc00d 455 Pfam PF05525 Branched-chain amino acid transport protein 3 438 4.9E-146 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 TP_0265 5f4bf4379caeee36047fc4e7269fc00d 455 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 10 425 2.4E-145 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 TP_0509 43f8b7fc93ce5a7fc8928180398488ce 188 Pfam PF00578 AhpC/TSA family 5 134 2.1E-33 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TP_0509 43f8b7fc93ce5a7fc8928180398488ce 188 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 179 4.4E-6 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TP_0509 43f8b7fc93ce5a7fc8928180398488ce 188 PIRSF PIRSF000239 1 188 2.4E-62 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TP_0509 43f8b7fc93ce5a7fc8928180398488ce 188 Gene3D G3DSA:3.40.30.10 1 186 4.0E-59 T 11-10-2018 TP_0509 43f8b7fc93ce5a7fc8928180398488ce 188 SUPERFAMILY SSF52833 4 187 8.2E-56 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TP_0060 458a1b688cf93bd96f0e86b2497bfa03 156 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 21.857 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0060 458a1b688cf93bd96f0e86b2497bfa03 156 SUPERFAMILY SSF55653 59 148 1.7E-19 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TP_0060 458a1b688cf93bd96f0e86b2497bfa03 156 Gene3D G3DSA:3.40.5.10 1 59 2.8E-19 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0060 458a1b688cf93bd96f0e86b2497bfa03 156 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.3E-18 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0060 458a1b688cf93bd96f0e86b2497bfa03 156 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 9.2E-20 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal TP_0060 458a1b688cf93bd96f0e86b2497bfa03 156 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0060 458a1b688cf93bd96f0e86b2497bfa03 156 Gene3D G3DSA:3.10.430.100 61 148 1.4E-19 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TP_0060 458a1b688cf93bd96f0e86b2497bfa03 156 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 7.2E-40 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0060 458a1b688cf93bd96f0e86b2497bfa03 156 SUPERFAMILY SSF55658 1 57 9.77E-15 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 Gene3D G3DSA:1.10.1900.20 57 118 1.2E-25 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 Gene3D G3DSA:1.10.720.90 3 56 5.6E-13 T 11-10-2018 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 SUPERFAMILY SSF74731 8 117 3.79E-40 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.2E-33 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.2E-33 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.2E-33 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 24.534 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.0E-48 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-22 T 11-10-2018 TP_0848 425a7e8d05c7cb2839ffe7da4b671aa4 122 Pfam PF00453 Ribosomal protein L20 8 108 2.3E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0989 436fabbb8d68a41c2b8c79fcefd01c8c 290 SUPERFAMILY SSF81296 208 289 5.6E-13 T 11-10-2018 IPR014756 Immunoglobulin E-set TP_0989 436fabbb8d68a41c2b8c79fcefd01c8c 290 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 209 289 8.9E-8 T 11-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 TP_0989 436fabbb8d68a41c2b8c79fcefd01c8c 290 Gene3D G3DSA:2.60.40.10 194 288 1.1E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold TP_0478 75e0b253fb798963c13594022a8a6517 515 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 12 501 6.6E-211 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 Gene3D G3DSA:3.40.50.720 9 187 1.2E-52 T 11-10-2018 TP_0478 75e0b253fb798963c13594022a8a6517 515 PIRSF PIRSF000110 1 503 5.0E-189 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 179 207 8.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 231 248 8.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 340 366 8.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 155 168 8.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 249 265 8.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 189 195 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 16 199 1.6E-58 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 SUPERFAMILY SSF51735 9 207 7.17E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0478 75e0b253fb798963c13594022a8a6517 515 Gene3D G3DSA:3.30.360.10 188 501 1.3E-120 T 11-10-2018 TP_0478 75e0b253fb798963c13594022a8a6517 515 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 201 500 3.1E-109 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 12 501 91.337 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 TP_0478 75e0b253fb798963c13594022a8a6517 515 SUPERFAMILY SSF55347 194 500 3.6E-110 T 11-10-2018 TP_1013 6ebc9a84e77dee1352043823c7f41036 88 Gene3D G3DSA:2.30.33.40 1 88 1.7E-30 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 TP_1013 6ebc9a84e77dee1352043823c7f41036 88 SMART SM00883 2 87 9.9E-40 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TP_1013 6ebc9a84e77dee1352043823c7f41036 88 Hamap MF_00580 10 kDa chaperonin [groS]. 2 88 20.976 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TP_1013 6ebc9a84e77dee1352043823c7f41036 88 Pfam PF00166 Chaperonin 10 Kd subunit 2 87 3.8E-29 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TP_1013 6ebc9a84e77dee1352043823c7f41036 88 PRINTS PR00297 10kDa chaperonin signature 74 87 1.6E-23 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TP_1013 6ebc9a84e77dee1352043823c7f41036 88 PRINTS PR00297 10kDa chaperonin signature 53 65 1.6E-23 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TP_1013 6ebc9a84e77dee1352043823c7f41036 88 PRINTS PR00297 10kDa chaperonin signature 3 18 1.6E-23 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TP_1013 6ebc9a84e77dee1352043823c7f41036 88 PRINTS PR00297 10kDa chaperonin signature 25 46 1.6E-23 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TP_1013 6ebc9a84e77dee1352043823c7f41036 88 SUPERFAMILY SSF50129 1 88 4.95E-28 T 11-10-2018 IPR011032 GroES-like superfamily TP_1013 6ebc9a84e77dee1352043823c7f41036 88 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 Gene3D G3DSA:3.30.70.600 1 101 2.7E-34 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.1E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.1E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.1E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.2E-43 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 24.434 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 SUPERFAMILY SSF54999 5 101 1.44E-34 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 SMART SM01403 7 101 3.2E-48 T 11-10-2018 IPR027486 Ribosomal protein S10 domain TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 7.6E-32 T 11-10-2018 IPR027486 Ribosomal protein S10 domain TP_0188 8b25dd285f43f2c7a1e3c1d873eb95e7 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0680 feed435b4be06cd6caa1851e3f968766 352 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 312 4.8E-118 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TP_0680 feed435b4be06cd6caa1851e3f968766 352 Gene3D G3DSA:3.30.420.40 128 293 4.8E-109 T 11-10-2018 TP_0680 feed435b4be06cd6caa1851e3f968766 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 8.2E-44 T 11-10-2018 IPR017861 Kae1/TsaD family TP_0680 feed435b4be06cd6caa1851e3f968766 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 8.2E-44 T 11-10-2018 IPR017861 Kae1/TsaD family TP_0680 feed435b4be06cd6caa1851e3f968766 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 8.2E-44 T 11-10-2018 IPR017861 Kae1/TsaD family TP_0680 feed435b4be06cd6caa1851e3f968766 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 8.2E-44 T 11-10-2018 IPR017861 Kae1/TsaD family TP_0680 feed435b4be06cd6caa1851e3f968766 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 8.2E-44 T 11-10-2018 IPR017861 Kae1/TsaD family TP_0680 feed435b4be06cd6caa1851e3f968766 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 8.2E-44 T 11-10-2018 IPR017861 Kae1/TsaD family TP_0680 feed435b4be06cd6caa1851e3f968766 352 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 54.397 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TP_0680 feed435b4be06cd6caa1851e3f968766 352 Gene3D G3DSA:3.30.420.40 3 312 4.8E-109 T 11-10-2018 TP_0680 feed435b4be06cd6caa1851e3f968766 352 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 TP_0680 feed435b4be06cd6caa1851e3f968766 352 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 3.3E-99 T 11-10-2018 IPR017861 Kae1/TsaD family TP_0680 feed435b4be06cd6caa1851e3f968766 352 Pfam PF00814 Glycoprotease family 24 306 1.9E-89 T 11-10-2018 IPR000905 Gcp-like domain TP_0680 feed435b4be06cd6caa1851e3f968766 352 SUPERFAMILY SSF53067 3 307 1.11E-31 T 11-10-2018 TP_0935 33ff8302b9036ddc18514b60ad56d84d 312 Pfam PF07859 alpha/beta hydrolase fold 73 275 4.0E-50 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TP_0935 33ff8302b9036ddc18514b60ad56d84d 312 SUPERFAMILY SSF53474 49 299 3.41E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TP_0935 33ff8302b9036ddc18514b60ad56d84d 312 Gene3D G3DSA:3.40.50.1820 4 306 2.2E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TP_0669 e76f0d5793f0af7f9427a3cc7a0eb922 1170 Gene3D G3DSA:1.10.10.1600 433 507 1.1E-19 T 11-10-2018 TP_0669 e76f0d5793f0af7f9427a3cc7a0eb922 1170 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1017 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0669 e76f0d5793f0af7f9427a3cc7a0eb922 1170 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 301 723 1.2E-168 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0669 e76f0d5793f0af7f9427a3cc7a0eb922 1170 Gene3D G3DSA:3.20.20.140 1 278 3.9E-110 T 11-10-2018 TP_0669 e76f0d5793f0af7f9427a3cc7a0eb922 1170 SMART SM00481 7 74 2.2E-32 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TP_0669 e76f0d5793f0af7f9427a3cc7a0eb922 1170 Pfam PF14579 Helix-hairpin-helix motif 797 885 1.3E-19 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0669 e76f0d5793f0af7f9427a3cc7a0eb922 1170 Pfam PF02811 PHP domain 8 181 3.1E-54 T 11-10-2018 IPR004013 PHP domain GO:0003824 TP_0669 e76f0d5793f0af7f9427a3cc7a0eb922 1170 SUPERFAMILY SSF89550 6 271 3.73E-39 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TP_0820 cf6e99180d700207f39f8bd7be3f05b3 256 Pfam PF13432 Tetratricopeptide repeat 87 137 1.3E-4 T 11-10-2018 TP_0820 cf6e99180d700207f39f8bd7be3f05b3 256 SMART SM00028 212 245 0.0042 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0820 cf6e99180d700207f39f8bd7be3f05b3 256 SMART SM00028 67 100 340.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0820 cf6e99180d700207f39f8bd7be3f05b3 256 SMART SM00028 178 211 0.16 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0820 cf6e99180d700207f39f8bd7be3f05b3 256 SMART SM00028 108 141 19.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0820 cf6e99180d700207f39f8bd7be3f05b3 256 SUPERFAMILY SSF48452 70 250 8.54E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0820 cf6e99180d700207f39f8bd7be3f05b3 256 Gene3D G3DSA:1.25.40.10 178 256 5.4E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0820 cf6e99180d700207f39f8bd7be3f05b3 256 Gene3D G3DSA:1.25.40.10 45 177 5.2E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 SUPERFAMILY SSF52540 637 930 1.59E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 Gene3D G3DSA:3.30.190.20 134 243 1.0E-238 T 11-10-2018 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 Gene3D G3DSA:3.40.50.300 10 612 1.0E-238 T 11-10-2018 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 Gene3D G3DSA:1.10.8.280 304 421 1.0E-238 T 11-10-2018 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 8 940 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 SUPERFAMILY SSF52540 7 587 3.94E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 ProSitePatterns PS00211 ABC transporters family signature. 505 519 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 Gene3D G3DSA:3.40.50.300 633 951 8.7E-133 T 11-10-2018 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 Gene3D G3DSA:1.20.1580.10 94 510 1.0E-238 T 11-10-2018 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 Hamap MF_00205 UvrABC system protein A [uvrA]. 5 956 22.698 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 Gene3D G3DSA:1.20.1580.10 708 846 8.7E-133 T 11-10-2018 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 ProSitePatterns PS00211 ABC transporters family signature. 846 860 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0514 dc70b9b284720bbae3ef01cc5cdccd15 960 Pfam PF00005 ABC transporter 640 876 4.4E-8 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0218 ecac420fa14600a6fcae38604b8ae2bf 489 SMART SM00331 268 487 1.4E-76 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0218 ecac420fa14600a6fcae38604b8ae2bf 489 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 296 487 1.9E-35 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0218 ecac420fa14600a6fcae38604b8ae2bf 489 Gene3D G3DSA:3.60.40.10 242 487 4.1E-49 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0218 ecac420fa14600a6fcae38604b8ae2bf 489 SUPERFAMILY SSF81606 283 487 4.58E-11 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0468 810e89b28ac65cc672c55b138c235e20 176 Pfam PF14559 Tetratricopeptide repeat 108 165 7.0E-6 T 11-10-2018 TP_0468 810e89b28ac65cc672c55b138c235e20 176 SMART SM00028 96 129 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0468 810e89b28ac65cc672c55b138c235e20 176 SMART SM00028 28 61 3.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0468 810e89b28ac65cc672c55b138c235e20 176 SMART SM00028 62 95 0.092 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0468 810e89b28ac65cc672c55b138c235e20 176 SMART SM00028 130 163 92.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0468 810e89b28ac65cc672c55b138c235e20 176 Gene3D G3DSA:1.25.40.10 1 175 2.6E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0468 810e89b28ac65cc672c55b138c235e20 176 SUPERFAMILY SSF48452 3 166 2.21E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0468 810e89b28ac65cc672c55b138c235e20 176 Pfam PF13432 Tetratricopeptide repeat 3 61 4.5E-8 T 11-10-2018 TP_0468 810e89b28ac65cc672c55b138c235e20 176 Pfam PF13176 Tetratricopeptide repeat 66 97 0.001 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 SUPERFAMILY SSF53623 116 317 9.16E-43 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 397 1.9E-14 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 454 6.8E-136 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 Pfam PF01225 Mur ligase family, catalytic domain 28 106 2.3E-9 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 Pfam PF08245 Mur ligase middle domain 119 299 1.3E-39 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 456 28.345 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 Gene3D G3DSA:3.40.1390.10 1 81 8.9E-19 T 11-10-2018 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 SUPERFAMILY SSF53244 327 453 5.72E-26 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 Gene3D G3DSA:3.90.190.20 323 459 2.8E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 Gene3D G3DSA:3.40.1190.10 94 317 5.0E-54 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0386 b315e6ac980f530bbc6e1b96149aa494 459 SUPERFAMILY SSF63418 24 108 4.97E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 SUPERFAMILY SSF54211 242 497 1.97E-85 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 SUPERFAMILY SSF55874 2 217 3.14E-60 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 Gene3D G3DSA:1.20.120.790 505 637 2.8E-37 T 11-10-2018 IPR037196 HSP90, C-terminal domain TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 177 2.3E-13 T 11-10-2018 TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 637 28.867 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 Gene3D G3DSA:3.30.70.2140 219 241 2.0E-77 T 11-10-2018 TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 PIRSF PIRSF002583 1 639 1.8E-198 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 PRINTS PR00775 90kDa heat shock protein signature 90 107 2.4E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 PRINTS PR00775 90kDa heat shock protein signature 23 45 2.4E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 PRINTS PR00775 90kDa heat shock protein signature 196 214 2.4E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 PRINTS PR00775 90kDa heat shock protein signature 72 89 2.4E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 PRINTS PR00775 90kDa heat shock protein signature 2 22 2.4E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 PRINTS PR00775 90kDa heat shock protein signature 117 139 2.4E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 PRINTS PR00775 90kDa heat shock protein signature 178 195 2.4E-59 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 SMART SM00387 24 190 2.8E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 Gene3D G3DSA:3.30.565.10 3 218 2.0E-77 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 Pfam PF00183 Hsp90 protein 224 637 3.8E-110 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 Gene3D G3DSA:3.40.50.11260 409 498 9.4E-25 T 11-10-2018 TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 SUPERFAMILY SSF110942 523 637 5.89E-32 T 11-10-2018 IPR037196 HSP90, C-terminal domain TP_0984 119f62abfa35b3f7720ffc9ad6f6fdb4 639 Gene3D G3DSA:3.30.230.80 259 408 5.3E-58 T 11-10-2018 TP_0116 3e81a18956187ac098fbec825c08510d 668 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 660 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TP_0116 3e81a18956187ac098fbec825c08510d 668 Pfam PF12344 Ultra-violet resistance protein B 549 590 5.3E-22 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain TP_0116 3e81a18956187ac098fbec825c08510d 668 Gene3D G3DSA:3.40.50.300 1 152 8.6E-69 T 11-10-2018 TP_0116 3e81a18956187ac098fbec825c08510d 668 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 662 42.014 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TP_0116 3e81a18956187ac098fbec825c08510d 668 Pfam PF00271 Helicase conserved C-terminal domain 432 542 2.7E-17 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0116 3e81a18956187ac098fbec825c08510d 668 Gene3D G3DSA:3.30.920.40 153 246 1.2E-25 T 11-10-2018 TP_0116 3e81a18956187ac098fbec825c08510d 668 SUPERFAMILY SSF46600 623 663 3.01E-7 T 11-10-2018 IPR036876 UVR domain superfamily TP_0116 3e81a18956187ac098fbec825c08510d 668 SUPERFAMILY SSF52540 36 583 2.8E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0116 3e81a18956187ac098fbec825c08510d 668 Gene3D G3DSA:3.40.50.300 412 593 3.4E-45 T 11-10-2018 TP_0116 3e81a18956187ac098fbec825c08510d 668 Pfam PF04851 Type III restriction enzyme, res subunit 12 118 4.4E-9 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TP_0116 3e81a18956187ac098fbec825c08510d 668 SUPERFAMILY SSF52540 1 412 8.84E-122 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0116 3e81a18956187ac098fbec825c08510d 668 Gene3D G3DSA:3.40.50.300 270 411 2.0E-45 T 11-10-2018 TP_0116 3e81a18956187ac098fbec825c08510d 668 SMART SM00490 457 543 1.5E-17 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0116 3e81a18956187ac098fbec825c08510d 668 Pfam PF02151 UvrB/uvrC motif 627 662 2.1E-5 T 11-10-2018 IPR001943 UVR domain GO:0005515 TP_0116 3e81a18956187ac098fbec825c08510d 668 SMART SM00487 8 423 3.7E-22 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TP_0949 7f5770701533e5fd650415396580d793 665 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 46 660 16.639 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 TP_0949 7f5770701533e5fd650415396580d793 665 Pfam PF02096 60Kd inner membrane protein 460 658 8.9E-55 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TP_0949 7f5770701533e5fd650415396580d793 665 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 459 658 1.3E-57 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0949 7f5770701533e5fd650415396580d793 665 PRINTS PR00701 60kDa inner membrane protein signature 521 544 3.7E-11 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TP_0949 7f5770701533e5fd650415396580d793 665 PRINTS PR00701 60kDa inner membrane protein signature 138 159 3.7E-11 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TP_0949 7f5770701533e5fd650415396580d793 665 PRINTS PR00701 60kDa inner membrane protein signature 569 591 3.7E-11 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TP_0949 7f5770701533e5fd650415396580d793 665 PRINTS PR01900 YidC translocation/secretion protein signature 445 461 7.4E-8 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TP_0949 7f5770701533e5fd650415396580d793 665 PRINTS PR01900 YidC translocation/secretion protein signature 575 590 7.4E-8 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TP_0949 7f5770701533e5fd650415396580d793 665 PRINTS PR01900 YidC translocation/secretion protein signature 613 637 7.4E-8 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TP_0949 7f5770701533e5fd650415396580d793 665 Pfam PF14849 YidC periplasmic domain 133 413 4.6E-7 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 Pfam PF02355 Protein export membrane protein 227 409 5.4E-63 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 4.9E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 PRINTS PR01755 Bacterial translocase SecF protein signature 317 335 4.9E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 PRINTS PR01755 Bacterial translocase SecF protein signature 349 364 4.9E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 PRINTS PR01755 Bacterial translocase SecF protein signature 269 283 4.9E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 SUPERFAMILY SSF82866 258 409 9.55E-30 T 11-10-2018 TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 Gene3D G3DSA:1.20.1640.10 220 413 4.4E-7 T 11-10-2018 TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 158 398 8.1E-67 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 412 28.785 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TP_0411 41b7b38d5c2793e8117a2b39442d3249 420 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 401 1.8E-100 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TP_0652 3d577cf3b23cc4b526769afbecc9defc 379 Pfam PF08402 TOBE domain 292 373 4.9E-12 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TP_0652 3d577cf3b23cc4b526769afbecc9defc 379 Gene3D G3DSA:3.40.50.300 9 227 3.2E-66 T 11-10-2018 TP_0652 3d577cf3b23cc4b526769afbecc9defc 379 Pfam PF00005 ABC transporter 26 167 4.2E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0652 3d577cf3b23cc4b526769afbecc9defc 379 SUPERFAMILY SSF52540 10 248 8.19E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0652 3d577cf3b23cc4b526769afbecc9defc 379 SMART SM00382 34 217 4.4E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0652 3d577cf3b23cc4b526769afbecc9defc 379 Gene3D G3DSA:2.40.50.940 228 320 3.2E-8 T 11-10-2018 TP_0652 3d577cf3b23cc4b526769afbecc9defc 379 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 370 1.3E-109 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 TP_0652 3d577cf3b23cc4b526769afbecc9defc 379 SUPERFAMILY SSF50331 251 373 3.53E-13 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TP_0652 3d577cf3b23cc4b526769afbecc9defc 379 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_1035 16dc18fef26584e79e275d409e174975 956 PRINTS PR00986 Valyl-tRNA synthetase signature 273 290 2.6E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TP_1035 16dc18fef26584e79e275d409e174975 956 PRINTS PR00986 Valyl-tRNA synthetase signature 518 536 2.6E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TP_1035 16dc18fef26584e79e275d409e174975 956 PRINTS PR00986 Valyl-tRNA synthetase signature 62 73 2.6E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TP_1035 16dc18fef26584e79e275d409e174975 956 PRINTS PR00986 Valyl-tRNA synthetase signature 389 402 2.6E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TP_1035 16dc18fef26584e79e275d409e174975 956 PRINTS PR00986 Valyl-tRNA synthetase signature 487 508 2.6E-35 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TP_1035 16dc18fef26584e79e275d409e174975 956 Gene3D G3DSA:1.10.730.10 11 794 3.7E-291 T 11-10-2018 TP_1035 16dc18fef26584e79e275d409e174975 956 Gene3D G3DSA:3.40.50.620 30 567 3.7E-291 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_1035 16dc18fef26584e79e275d409e174975 956 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 54 603 1.9E-186 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_1035 16dc18fef26584e79e275d409e174975 956 SUPERFAMILY SSF52374 10 611 2.94E-129 T 11-10-2018 TP_1035 16dc18fef26584e79e275d409e174975 956 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 945 5.0E-11 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 TP_1035 16dc18fef26584e79e275d409e174975 956 Hamap MF_02004 Valine--tRNA ligase [valS]. 10 946 14.625 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TP_1035 16dc18fef26584e79e275d409e174975 956 SUPERFAMILY SSF50677 217 385 2.75E-52 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TP_1035 16dc18fef26584e79e275d409e174975 956 SUPERFAMILY SSF46589 881 945 2.35E-12 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TP_1035 16dc18fef26584e79e275d409e174975 956 Pfam PF08264 Anticodon-binding domain of tRNA 648 806 1.0E-38 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TP_1035 16dc18fef26584e79e275d409e174975 956 TIGRFAM TIGR00422 valS: valine--tRNA ligase 13 928 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TP_1035 16dc18fef26584e79e275d409e174975 956 SUPERFAMILY SSF47323 618 895 3.55E-55 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_1035 16dc18fef26584e79e275d409e174975 956 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 69 80 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_1035 16dc18fef26584e79e275d409e174975 956 Gene3D G3DSA:1.10.287.380 877 946 6.9E-12 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 TP_1035 16dc18fef26584e79e275d409e174975 956 Gene3D G3DSA:3.90.740.10 201 385 3.7E-291 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 SUPERFAMILY SSF57716 11 45 2.28E-8 T 11-10-2018 TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 411 49.447 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 SUPERFAMILY SSF52540 58 391 2.55E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 Gene3D G3DSA:3.30.50.30 3 48 1.8E-12 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 306 4.0E-44 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 SMART SM00994 9 48 1.1E-14 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 SMART SM01086 313 407 6.5E-29 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 Pfam PF06689 ClpX C4-type zinc finger 12 46 1.2E-13 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 313 385 3.4E-16 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 SMART SM00382 109 262 2.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 406 2.5E-182 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 Gene3D G3DSA:3.40.50.300 54 311 2.0E-100 T 11-10-2018 TP_0508 db50ff1696fe1b478c902f1b21a7486c 415 Gene3D G3DSA:1.10.8.60 312 413 2.8E-33 T 11-10-2018 TP_0098 15ccb3f90f3265b6c536285a986ecba8 216 SMART SM00271 7 65 4.6E-27 T 11-10-2018 IPR001623 DnaJ domain TP_0098 15ccb3f90f3265b6c536285a986ecba8 216 PRINTS PR00625 DnaJ domain signature 10 28 7.1E-17 T 11-10-2018 IPR001623 DnaJ domain TP_0098 15ccb3f90f3265b6c536285a986ecba8 216 PRINTS PR00625 DnaJ domain signature 28 43 7.1E-17 T 11-10-2018 IPR001623 DnaJ domain TP_0098 15ccb3f90f3265b6c536285a986ecba8 216 PRINTS PR00625 DnaJ domain signature 45 65 7.1E-17 T 11-10-2018 IPR001623 DnaJ domain TP_0098 15ccb3f90f3265b6c536285a986ecba8 216 Gene3D G3DSA:1.10.287.110 1 87 1.1E-27 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TP_0098 15ccb3f90f3265b6c536285a986ecba8 216 ProSitePatterns PS00636 Nt-dnaJ domain signature. 50 69 - T 11-10-2018 IPR018253 DnaJ domain, conserved site TP_0098 15ccb3f90f3265b6c536285a986ecba8 216 SUPERFAMILY SSF46565 7 97 6.41E-26 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TP_0098 15ccb3f90f3265b6c536285a986ecba8 216 Pfam PF00226 DnaJ domain 8 70 5.1E-25 T 11-10-2018 IPR001623 DnaJ domain TP_0657 70451e173f8a353ab2ccf79f263d9dc6 73 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 71 17.97 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TP_0657 70451e173f8a353ab2ccf79f263d9dc6 73 SUPERFAMILY SSF117130 1 55 4.18E-19 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TP_0657 70451e173f8a353ab2ccf79f263d9dc6 73 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 1.4E-25 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TP_0657 70451e173f8a353ab2ccf79f263d9dc6 73 Gene3D G3DSA:3.30.70.1680 1 61 2.2E-26 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TP_0657 70451e173f8a353ab2ccf79f263d9dc6 73 Pfam PF02599 Global regulator protein family 1 52 3.9E-24 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TP_0657 70451e173f8a353ab2ccf79f263d9dc6 73 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 4.0E-21 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TP_0945 86194a7fc208ac3bf138dbc6b93b0bff 218 PIRSF PIRSF001461 1 213 3.8E-90 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TP_0945 86194a7fc208ac3bf138dbc6b93b0bff 218 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 204 1.7E-74 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TP_0945 86194a7fc208ac3bf138dbc6b93b0bff 218 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 203 4.5E-70 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TP_0945 86194a7fc208ac3bf138dbc6b93b0bff 218 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TP_0945 86194a7fc208ac3bf138dbc6b93b0bff 218 Gene3D G3DSA:3.20.20.70 1 210 6.3E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0945 86194a7fc208ac3bf138dbc6b93b0bff 218 SUPERFAMILY SSF51366 5 204 8.75E-63 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TP_0945 86194a7fc208ac3bf138dbc6b93b0bff 218 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TP_0948 4b0e0b8a419d8dde93f21bd063982502 231 Gene3D G3DSA:3.30.1370.50 163 229 8.4E-23 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 TP_0948 4b0e0b8a419d8dde93f21bd063982502 231 SMART SM00393 148 227 2.4E-28 T 11-10-2018 IPR001374 R3H domain GO:0003676 TP_0948 4b0e0b8a419d8dde93f21bd063982502 231 SUPERFAMILY SSF82708 180 226 2.94E-7 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 TP_0948 4b0e0b8a419d8dde93f21bd063982502 231 SMART SM01245 4 53 1.9E-12 T 11-10-2018 IPR032782 Jag, N-terminal TP_0948 4b0e0b8a419d8dde93f21bd063982502 231 Gene3D G3DSA:3.30.300.20 81 162 9.8E-19 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TP_0948 4b0e0b8a419d8dde93f21bd063982502 231 Pfam PF14804 Jag N-terminus 5 52 6.8E-11 T 11-10-2018 IPR032782 Jag, N-terminal TP_0948 4b0e0b8a419d8dde93f21bd063982502 231 Gene3D G3DSA:3.30.30.80 2 57 3.2E-5 T 11-10-2018 IPR038247 Jag, N-terminal domain superfamily TP_0948 4b0e0b8a419d8dde93f21bd063982502 231 Pfam PF01424 R3H domain 167 225 7.6E-13 T 11-10-2018 IPR001374 R3H domain GO:0003676 TP_0948 4b0e0b8a419d8dde93f21bd063982502 231 Pfam PF13083 KH domain 85 153 1.9E-10 T 11-10-2018 TP_0054 1a9295620665b154718ca691588f1d67 319 Gene3D G3DSA:3.30.1330.30 15 97 1.5E-7 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like TP_0054 1a9295620665b154718ca691588f1d67 319 SUPERFAMILY SSF55315 16 97 7.3E-11 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like TP_0054 1a9295620665b154718ca691588f1d67 319 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 28 101 3.6E-13 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TP_0054 1a9295620665b154718ca691588f1d67 319 SUPERFAMILY SSF75217 90 274 4.64E-34 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TP_0054 1a9295620665b154718ca691588f1d67 319 Pfam PF00588 SpoU rRNA Methylase family 118 261 5.0E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TP_0054 1a9295620665b154718ca691588f1d67 319 SMART SM00967 27 102 1.5E-9 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TP_0054 1a9295620665b154718ca691588f1d67 319 Gene3D G3DSA:3.40.1280.10 105 269 2.0E-38 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TP_0868 017444c36191a0d810c2c7862f5cc08b 286 PRINTS PR00207 Flagellin signature 35 52 3.2E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TP_0868 017444c36191a0d810c2c7862f5cc08b 286 PRINTS PR00207 Flagellin signature 74 93 3.2E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TP_0868 017444c36191a0d810c2c7862f5cc08b 286 PRINTS PR00207 Flagellin signature 109 132 3.2E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TP_0868 017444c36191a0d810c2c7862f5cc08b 286 SUPERFAMILY SSF64518 1 286 2.22E-82 T 11-10-2018 TP_0868 017444c36191a0d810c2c7862f5cc08b 286 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 1.8E-37 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TP_0868 017444c36191a0d810c2c7862f5cc08b 286 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 285 1.4E-21 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TP_0868 017444c36191a0d810c2c7862f5cc08b 286 Gene3D G3DSA:1.20.58.1830 251 285 6.4E-35 T 11-10-2018 TP_0868 017444c36191a0d810c2c7862f5cc08b 286 Gene3D G3DSA:1.20.58.1830 3 31 4.7E-59 T 11-10-2018 TP_0868 017444c36191a0d810c2c7862f5cc08b 286 Gene3D G3DSA:1.20.1330.10 43 180 4.7E-59 T 11-10-2018 TP_0868 017444c36191a0d810c2c7862f5cc08b 286 Gene3D G3DSA:1.20.1330.10 194 245 6.4E-35 T 11-10-2018 TP_0058 e9d51201496b87f5592f17d5e49f1a96 438 Pfam PF00772 DnaB-like helicase N terminal domain 16 116 9.8E-30 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 TP_0058 e9d51201496b87f5592f17d5e49f1a96 438 SUPERFAMILY SSF52540 191 427 3.75E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0058 e9d51201496b87f5592f17d5e49f1a96 438 Pfam PF03796 DnaB-like helicase C terminal domain 191 433 9.9E-82 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 TP_0058 e9d51201496b87f5592f17d5e49f1a96 438 SUPERFAMILY SSF48024 14 125 9.81E-32 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 TP_0058 e9d51201496b87f5592f17d5e49f1a96 438 Gene3D G3DSA:3.40.50.300 174 437 2.4E-86 T 11-10-2018 TP_0058 e9d51201496b87f5592f17d5e49f1a96 438 Gene3D G3DSA:1.10.860.10 8 172 2.5E-46 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal TP_0058 e9d51201496b87f5592f17d5e49f1a96 438 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 434 5.2E-132 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 TP_0710 c33e543f335b3b21f3fcc01b23c1a2bc 656 Pfam PF03961 Flagellar Assembly Protein A 182 634 1.1E-127 T 11-10-2018 IPR005646 Flagellar assembly protein A TP_0710 c33e543f335b3b21f3fcc01b23c1a2bc 656 Gene3D G3DSA:3.30.30.80 22 76 1.3E-10 T 11-10-2018 IPR038247 Jag, N-terminal domain superfamily TP_0710 c33e543f335b3b21f3fcc01b23c1a2bc 656 SMART SM01245 26 77 1.2E-13 T 11-10-2018 IPR032782 Jag, N-terminal TP_0710 c33e543f335b3b21f3fcc01b23c1a2bc 656 Pfam PF14804 Jag N-terminus 29 75 2.0E-13 T 11-10-2018 IPR032782 Jag, N-terminal TP_0108 2b63e0eff02633b343b2acba2208df69 461 Gene3D G3DSA:3.40.50.450 77 269 2.4E-57 T 11-10-2018 TP_0108 2b63e0eff02633b343b2acba2208df69 461 SUPERFAMILY SSF53784 50 456 2.49E-111 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0108 2b63e0eff02633b343b2acba2208df69 461 Pfam PF00365 Phosphofructokinase 84 405 3.6E-59 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0108 2b63e0eff02633b343b2acba2208df69 461 Hamap MF_01981 ATP-dependent 6-phosphofructokinase [pfkA]. 8 457 55.945 T 11-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TP_0108 2b63e0eff02633b343b2acba2208df69 461 PIRSF PIRSF000534 1 461 5.4E-228 T 11-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TP_0108 2b63e0eff02633b343b2acba2208df69 461 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 173 189 1.7E-25 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0108 2b63e0eff02633b343b2acba2208df69 461 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 224 242 1.7E-25 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0108 2b63e0eff02633b343b2acba2208df69 461 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 85 104 1.7E-25 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0108 2b63e0eff02633b343b2acba2208df69 461 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 206 223 1.7E-25 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0108 2b63e0eff02633b343b2acba2208df69 461 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 245 261 1.7E-25 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_0108 2b63e0eff02633b343b2acba2208df69 461 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 302 314 1.7E-25 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TP_1026 f5cce2dc05e6d0333414dd3381ec3ac5 589 Pfam PF01432 Peptidase family M3 312 508 8.3E-14 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 TP_1026 f5cce2dc05e6d0333414dd3381ec3ac5 589 SUPERFAMILY SSF55486 36 582 2.69E-93 T 11-10-2018 TP_1026 f5cce2dc05e6d0333414dd3381ec3ac5 589 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 35 576 1.2E-166 T 11-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related TP_1026 f5cce2dc05e6d0333414dd3381ec3ac5 589 Gene3D G3DSA:1.10.1370.30 1 588 1.0E-168 T 11-10-2018 TP_0359 88dcef8e753eeaa1fcb912e1b212f34c 211 Pfam PF16258 Domain of unknown function (DUF4912) 68 176 6.8E-20 T 11-10-2018 IPR032585 Protein of unknown function DUF4912 TP_0525 615167a01bafe9756bf053c123969d2b 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 60 9.5E-19 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like TP_0525 615167a01bafe9756bf053c123969d2b 187 Gene3D G3DSA:2.30.30.30 1 62 1.7E-19 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TP_0525 615167a01bafe9756bf053c123969d2b 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 121 4.0E-16 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TP_0525 615167a01bafe9756bf053c123969d2b 187 PIRSF PIRSF005901 1 186 1.2E-69 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP TP_0525 615167a01bafe9756bf053c123969d2b 187 SUPERFAMILY SSF50249 130 185 2.31E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0525 615167a01bafe9756bf053c123969d2b 187 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site TP_0525 615167a01bafe9756bf053c123969d2b 187 SUPERFAMILY SSF50249 65 127 8.14E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0525 615167a01bafe9756bf053c123969d2b 187 SUPERFAMILY SSF50104 1 63 4.03E-16 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TP_0525 615167a01bafe9756bf053c123969d2b 187 SMART SM00841 129 184 5.7E-28 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TP_0525 615167a01bafe9756bf053c123969d2b 187 Gene3D G3DSA:2.40.50.140 128 187 7.4E-24 T 11-10-2018 TP_0525 615167a01bafe9756bf053c123969d2b 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 1.7E-66 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TP_0525 615167a01bafe9756bf053c123969d2b 187 Hamap MF_00141 Elongation factor P [efp]. 1 185 47.291 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TP_0525 615167a01bafe9756bf053c123969d2b 187 Pfam PF09285 Elongation factor P, C-terminal 131 184 4.8E-23 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TP_0525 615167a01bafe9756bf053c123969d2b 187 SMART SM01185 67 121 3.9E-16 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TP_0525 615167a01bafe9756bf053c123969d2b 187 Gene3D G3DSA:2.40.50.140 64 127 1.0E-17 T 11-10-2018 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 752 763 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TP_0939 58b5a71782dd705f59b903a589f3a917 1184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 696 707 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TP_0939 58b5a71782dd705f59b903a589f3a917 1184 SUPERFAMILY SSF53323 424 675 1.16E-78 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Gene3D G3DSA:3.30.70.20 676 798 3.7E-39 T 11-10-2018 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 SUPERFAMILY SSF54862 672 842 3.91E-21 T 11-10-2018 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 SUPERFAMILY SSF52922 261 421 4.28E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 433 615 4.3E-27 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Gene3D G3DSA:3.40.50.970 3 259 2.3E-104 T 11-10-2018 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 248 4.0E-81 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Pfam PF12838 4Fe-4S dicluster domain 696 764 9.0E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Gene3D G3DSA:3.40.920.10 424 630 4.7E-84 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 SMART SM00890 629 686 3.6E-27 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 354 2.8E-13 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 969 1081 4.6E-12 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Pfam PF10371 Domain of unknown function 634 685 1.7E-20 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Gene3D G3DSA:3.40.50.920 260 422 3.5E-58 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 PIRSF PIRSF000159 1 1184 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 SUPERFAMILY SSF52518 804 1182 5.15E-126 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TP_0939 58b5a71782dd705f59b903a589f3a917 1184 SUPERFAMILY SSF52518 5 259 5.0E-72 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TP_0939 58b5a71782dd705f59b903a589f3a917 1184 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 1181 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TP_0939 58b5a71782dd705f59b903a589f3a917 1184 Gene3D G3DSA:3.40.50.970 802 1182 2.5E-158 T 11-10-2018 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 Gene3D G3DSA:3.30.420.40 197 411 3.2E-76 T 11-10-2018 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 PIRSF PIRSF000722 1 403 1.1E-138 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 Pfam PF00871 Acetokinase family 3 392 2.0E-134 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 SUPERFAMILY SSF53067 1 196 3.63E-58 T 11-10-2018 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 Hamap MF_00020 Acetate kinase [ackA]. 1 403 168.966 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 PRINTS PR00471 Acetate kinase family signature 301 314 1.8E-38 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 PRINTS PR00471 Acetate kinase family signature 324 340 1.8E-38 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 PRINTS PR00471 Acetate kinase family signature 3 14 1.8E-38 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 PRINTS PR00471 Acetate kinase family signature 381 393 1.8E-38 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 PRINTS PR00471 Acetate kinase family signature 204 225 1.8E-38 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 PRINTS PR00471 Acetate kinase family signature 174 187 1.8E-38 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 TIGRFAM TIGR00016 ackA: acetate kinase 2 400 3.3E-143 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 Gene3D G3DSA:3.30.420.40 1 195 2.9E-62 T 11-10-2018 TP_0476 db30d504e9dbeda91f0fe9c4ebce8ba4 448 SUPERFAMILY SSF53067 159 401 4.59E-83 T 11-10-2018 TP_0973 066d78babc5b9187dc15b7c9882874a9 553 SUPERFAMILY SSF55681 281 550 7.82E-56 T 11-10-2018 TP_0973 066d78babc5b9187dc15b7c9882874a9 553 Hamap MF_00282 Phenylalanine--tRNA ligase alpha subunit [pheS]. 17 553 36.588 T 11-10-2018 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal GO:0004826 KEGG: 00970+6.1.1.20 TP_0973 066d78babc5b9187dc15b7c9882874a9 553 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 250 549 1.8E-95 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TP_0973 066d78babc5b9187dc15b7c9882874a9 553 Gene3D G3DSA:3.30.930.10 253 552 8.0E-82 T 11-10-2018 TP_0973 066d78babc5b9187dc15b7c9882874a9 553 Pfam PF01409 tRNA synthetases class II core domain (F) 281 549 4.7E-81 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 TP_0072 1c41da8742ba74185629b1e4f0502458 90 SUPERFAMILY SSF52833 4 80 1.51E-8 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TP_0072 1c41da8742ba74185629b1e4f0502458 90 Gene3D G3DSA:3.40.30.10 3 88 7.8E-10 T 11-10-2018 TP_0072 1c41da8742ba74185629b1e4f0502458 90 Pfam PF00462 Glutaredoxin 6 41 2.8E-6 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TP_0072 1c41da8742ba74185629b1e4f0502458 90 PIRSF PIRSF037291 2 89 5.7E-42 T 11-10-2018 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 PRINTS PR00315 GTP-binding elongation factor signature 59 67 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 PRINTS PR00315 GTP-binding elongation factor signature 10 23 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 PRINTS PR00315 GTP-binding elongation factor signature 95 106 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 PRINTS PR00315 GTP-binding elongation factor signature 79 89 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 SUPERFAMILY SSF52540 5 280 4.42E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Pfam PF03144 Elongation factor Tu domain 2 321 387 2.7E-13 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Pfam PF00009 Elongation factor Tu GTP binding domain 8 279 1.9E-61 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Gene3D G3DSA:3.30.230.10 480 680 1.7E-77 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Gene3D G3DSA:3.40.50.300 3 289 1.3E-99 T 11-10-2018 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 SUPERFAMILY SSF54211 475 594 5.56E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 SMART SM00838 595 682 8.8E-36 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Pfam PF14492 Elongation Factor G, domain II 400 473 1.9E-32 T 11-10-2018 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 2.0E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Gene3D G3DSA:3.30.70.870 402 476 1.2E-28 T 11-10-2018 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Pfam PF03764 Elongation factor G, domain IV 475 592 1.9E-39 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 SUPERFAMILY SSF54980 400 477 1.26E-22 T 11-10-2018 IPR035647 EF-G domain III/V-like TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 5 686 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Hamap MF_00054_B Elongation factor G [fusA]. 4 686 103.709 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 SUPERFAMILY SSF54980 598 688 1.01E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Gene3D G3DSA:3.30.70.240 599 669 1.7E-77 T 11-10-2018 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 SUPERFAMILY SSF50447 248 398 2.07E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 SMART SM00889 476 593 1.5E-57 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Pfam PF00679 Elongation factor G C-terminus 596 679 4.6E-24 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TP_0767 2afc61dd95e8e69c11ae69c9ae383f87 695 Gene3D G3DSA:2.40.30.10 290 401 1.9E-30 T 11-10-2018 TP_0994 b6e213a0309c5e83bdeee6eb82d019c2 269 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 120 130 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TP_0994 b6e213a0309c5e83bdeee6eb82d019c2 269 Pfam PF01026 TatD related DNase 27 250 8.1E-43 T 11-10-2018 IPR001130 TatD family GO:0016788 TP_0994 b6e213a0309c5e83bdeee6eb82d019c2 269 Gene3D G3DSA:3.20.20.140 2 258 7.8E-53 T 11-10-2018 TP_0994 b6e213a0309c5e83bdeee6eb82d019c2 269 PIRSF PIRSF005902 3 255 2.2E-60 T 11-10-2018 IPR001130 TatD family GO:0016788 TP_0994 b6e213a0309c5e83bdeee6eb82d019c2 269 SUPERFAMILY SSF51556 30 251 6.5E-49 T 11-10-2018 IPR032466 Metal-dependent hydrolase TP_0994 b6e213a0309c5e83bdeee6eb82d019c2 269 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 187 203 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TP_0911 6df9a4b03d22f83d3439a7e96dac22d5 83 SUPERFAMILY SSF160544 7 81 1.14E-19 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TP_0911 6df9a4b03d22f83d3439a7e96dac22d5 83 Gene3D G3DSA:3.40.1690.10 5 83 8.3E-21 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TP_0911 6df9a4b03d22f83d3439a7e96dac22d5 83 TIGRFAM TIGR00789 flhB_rel: FlhB domain protein 4 83 2.7E-35 T 11-10-2018 IPR004683 Type III secretion system substrate exporter FlhB-like TP_0911 6df9a4b03d22f83d3439a7e96dac22d5 83 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 78 9.1E-17 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TP_0272 7dd9c04b9bf90befbc0d54bba8cc7e7b 253 Gene3D G3DSA:3.40.50.300 1 251 4.6E-78 T 11-10-2018 TP_0272 7dd9c04b9bf90befbc0d54bba8cc7e7b 253 SUPERFAMILY SSF52540 1 249 1.95E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0272 7dd9c04b9bf90befbc0d54bba8cc7e7b 253 Pfam PF13614 AAA domain 3 175 1.3E-58 T 11-10-2018 IPR025669 AAA domain TP_0272 7dd9c04b9bf90befbc0d54bba8cc7e7b 253 PIRSF PIRSF009320 86 253 6.3E-9 T 11-10-2018 TP_0272 7dd9c04b9bf90befbc0d54bba8cc7e7b 253 PIRSF PIRSF009320 2 64 1.4E-13 T 11-10-2018 TP_1011 8cdd124e663935d3d5484e6b062c5ee9 202 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 166 2.5E-46 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TP_1011 8cdd124e663935d3d5484e6b062c5ee9 202 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TP_1011 8cdd124e663935d3d5484e6b062c5ee9 202 SUPERFAMILY SSF53178 4 190 6.67E-53 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TP_1011 8cdd124e663935d3d5484e6b062c5ee9 202 Gene3D G3DSA:3.40.50.1470 2 192 3.7E-54 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TP_1011 8cdd124e663935d3d5484e6b062c5ee9 202 Pfam PF01195 Peptidyl-tRNA hydrolase 5 178 2.2E-48 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TP_1011 8cdd124e663935d3d5484e6b062c5ee9 202 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 183 31.299 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 Gene3D G3DSA:3.10.290.10 330 414 6.6E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 Pfam PF00579 tRNA synthetases class I (W and Y) 37 323 5.4E-83 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 51 73 6.0E-28 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 6.0E-28 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 6.0E-28 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 6.0E-28 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 9 412 39.269 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 SUPERFAMILY SSF55174 333 411 3.06E-12 T 11-10-2018 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 SUPERFAMILY SSF52374 10 321 7.74E-89 T 11-10-2018 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 412 1.1E-112 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 Gene3D G3DSA:1.10.240.10 228 329 7.3E-27 T 11-10-2018 TP_0834 6e91cd4488a43b30969738442ace9f8e 416 Gene3D G3DSA:3.40.50.620 8 227 3.3E-78 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0447 cde75186fb59e5ab488ca31fa6c79574 374 Gene3D G3DSA:1.25.40.10 28 323 7.0E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0851 d114219c43adeb66aa505ecc1b0dc1c3 724 SUPERFAMILY SSF51161 227 403 2.97E-8 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TP_0851 d114219c43adeb66aa505ecc1b0dc1c3 724 Gene3D G3DSA:2.160.10.10 210 405 1.8E-8 T 11-10-2018 TP_0851 d114219c43adeb66aa505ecc1b0dc1c3 724 Pfam PF16314 Domain of unknown function (DUF4954) 42 711 1.4E-132 T 11-10-2018 IPR032533 Protein of unknown function DUF4954 TP_0170 af16838fa7a3aab00917e399e660c24e 269 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 115 2.3E-22 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TP_0170 af16838fa7a3aab00917e399e660c24e 269 SUPERFAMILY SSF53167 2 252 2.36E-54 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TP_0170 af16838fa7a3aab00917e399e660c24e 269 Gene3D G3DSA:3.40.50.1580 1 260 3.3E-54 T 11-10-2018 TP_0170 af16838fa7a3aab00917e399e660c24e 269 Pfam PF01048 Phosphorylase superfamily 3 249 8.3E-48 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TP_0650 ba3a9e2eeb5942e47cf0aa374bd88cfe 160 SUPERFAMILY SSF55486 10 147 1.15E-34 T 11-10-2018 TP_0650 ba3a9e2eeb5942e47cf0aa374bd88cfe 160 Gene3D G3DSA:3.40.390.30 21 155 1.2E-33 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 TP_0650 ba3a9e2eeb5942e47cf0aa374bd88cfe 160 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 147 1.4E-31 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TP_0650 ba3a9e2eeb5942e47cf0aa374bd88cfe 160 Pfam PF02130 Uncharacterized protein family UPF0054 29 147 2.5E-28 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TP_0650 ba3a9e2eeb5942e47cf0aa374bd88cfe 160 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 158 19.133 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TP_0650 ba3a9e2eeb5942e47cf0aa374bd88cfe 160 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 118 128 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site TP_0362 1d640a15bc8851c92723af3573065f4d 78 Pfam PF00830 Ribosomal L28 family 3 56 3.0E-18 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0362 1d640a15bc8851c92723af3573065f4d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 74 17.038 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0362 1d640a15bc8851c92723af3573065f4d 78 Gene3D G3DSA:2.30.170.40 1 77 1.3E-14 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0362 1d640a15bc8851c92723af3573065f4d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 6.8E-24 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0362 1d640a15bc8851c92723af3573065f4d 78 SUPERFAMILY SSF143800 1 60 8.63E-21 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0102 6074084461c9dd5f7373e7d98bcd0c8b 657 Gene3D G3DSA:1.10.10.160 105 176 1.8E-86 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily TP_0102 6074084461c9dd5f7373e7d98bcd0c8b 657 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 123 2.8E-36 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TP_0102 6074084461c9dd5f7373e7d98bcd0c8b 657 Pfam PF00580 UvrD/REP helicase N-terminal domain 149 257 4.2E-36 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TP_0102 6074084461c9dd5f7373e7d98bcd0c8b 657 Pfam PF13361 UvrD-like helicase C-terminal domain 262 606 1.0E-67 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TP_0102 6074084461c9dd5f7373e7d98bcd0c8b 657 SUPERFAMILY SSF52540 2 632 9.97E-162 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0102 6074084461c9dd5f7373e7d98bcd0c8b 657 Gene3D G3DSA:3.40.50.300 265 625 1.5E-112 T 11-10-2018 TP_0102 6074084461c9dd5f7373e7d98bcd0c8b 657 Gene3D G3DSA:1.10.486.10 368 536 1.5E-112 T 11-10-2018 TP_0102 6074084461c9dd5f7373e7d98bcd0c8b 657 Gene3D G3DSA:3.40.50.300 5 257 1.8E-86 T 11-10-2018 TP_0727 c16108248c01ca8f6390591bfcce52ba 463 Pfam PF00460 Flagella basal body rod protein 8 35 2.6E-12 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TP_0727 c16108248c01ca8f6390591bfcce52ba 463 SUPERFAMILY SSF117143 91 423 4.58E-67 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TP_0727 c16108248c01ca8f6390591bfcce52ba 463 Pfam PF07559 Flagellar basal body protein FlaE 195 343 1.1E-16 T 11-10-2018 IPR011491 Flagellar hook protein FlgE TP_0727 c16108248c01ca8f6390591bfcce52ba 463 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 443 8.9E-84 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TP_0727 c16108248c01ca8f6390591bfcce52ba 463 Gene3D G3DSA:2.60.98.20 168 344 3.8E-9 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily TP_0727 c16108248c01ca8f6390591bfcce52ba 463 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 384 461 1.3E-17 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TP_0727 c16108248c01ca8f6390591bfcce52ba 463 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TP_0213 d58af2cc224de73d8e3987035d24fa52 164 SUPERFAMILY SSF64263 1 118 5.89E-42 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0213 d58af2cc224de73d8e3987035d24fa52 164 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.594 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0213 d58af2cc224de73d8e3987035d24fa52 164 Gene3D G3DSA:3.90.1030.10 1 116 8.3E-42 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0213 d58af2cc224de73d8e3987035d24fa52 164 Pfam PF01196 Ribosomal protein L17 20 116 7.0E-32 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0213 d58af2cc224de73d8e3987035d24fa52 164 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 4.7E-41 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0213 d58af2cc224de73d8e3987035d24fa52 164 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0511 13171942110d16b57e14bf104ae36c89 208 Gene3D G3DSA:2.30.30.840 31 96 7.7E-23 T 11-10-2018 TP_0511 13171942110d16b57e14bf104ae36c89 208 Pfam PF02559 CarD-like/TRCF domain 36 142 5.8E-13 T 11-10-2018 IPR003711 CarD-like/TRCF domain TP_0511 13171942110d16b57e14bf104ae36c89 208 SMART SM01058 35 145 1.5E-23 T 11-10-2018 IPR003711 CarD-like/TRCF domain TP_0511 13171942110d16b57e14bf104ae36c89 208 Gene3D G3DSA:1.20.58.1290 97 195 1.6E-19 T 11-10-2018 TP_0511 13171942110d16b57e14bf104ae36c89 208 SUPERFAMILY SSF141259 34 100 5.36E-11 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 33 238 1.3E-22 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 75 169 1.8E-12 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 SMART SM00662 27 244 4.0E-47 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 329 2.4E-111 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 SUPERFAMILY SSF56553 62 188 2.51E-24 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 7 330 31.409 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 273 329 3.0E-13 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 Gene3D G3DSA:3.30.1360.10 21 234 1.1E-71 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 SUPERFAMILY SSF55257 16 243 4.32E-28 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 Gene3D G3DSA:2.170.120.12 57 187 1.1E-71 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 SUPERFAMILY SSF47789 263 333 3.4E-19 T 11-10-2018 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 Gene3D G3DSA:1.10.150.20 235 348 1.1E-24 T 11-10-2018 TP_0212 807ea8004010a2bccf0c9a2f2f9c6c34 351 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 258 322 3.4E-21 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 SMART SM00480 17 366 1.4E-161 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 Gene3D G3DSA:3.10.150.10 2 242 6.3E-94 T 11-10-2018 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.5E-23 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 370 1.1E-135 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 SUPERFAMILY SSF55979 245 369 3.09E-27 T 11-10-2018 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 Gene3D G3DSA:3.70.10.10 138 368 6.3E-94 T 11-10-2018 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 369 1.7E-25 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 PIRSF PIRSF000804 1 371 2.1E-114 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 SUPERFAMILY SSF55979 2 120 5.76E-16 T 11-10-2018 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 SUPERFAMILY SSF55979 127 244 1.65E-20 T 11-10-2018 TP_0002 7addf2fd2ff2b1f9b4c812c05149d94a 371 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 2 119 6.5E-21 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TP_0236 a11d1511c6db65c6df234c36a9185902 185 SMART SM00738 2 117 8.3E-41 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TP_0236 a11d1511c6db65c6df234c36a9185902 185 Pfam PF02357 Transcription termination factor nusG 3 114 2.0E-19 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TP_0236 a11d1511c6db65c6df234c36a9185902 185 Gene3D G3DSA:2.30.30.30 125 184 2.3E-21 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TP_0236 a11d1511c6db65c6df234c36a9185902 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 184 1.4E-59 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TP_0236 a11d1511c6db65c6df234c36a9185902 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 185 20.572 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TP_0236 a11d1511c6db65c6df234c36a9185902 185 SMART SM00739 131 158 3.1E-4 T 11-10-2018 IPR005824 KOW TP_0236 a11d1511c6db65c6df234c36a9185902 185 SUPERFAMILY SSF50104 131 184 1.07E-15 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TP_0236 a11d1511c6db65c6df234c36a9185902 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 1.2E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TP_0236 a11d1511c6db65c6df234c36a9185902 185 PRINTS PR00338 Transcription termination factor NUSG signature 58 70 1.2E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TP_0236 a11d1511c6db65c6df234c36a9185902 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 1.2E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TP_0236 a11d1511c6db65c6df234c36a9185902 185 Gene3D G3DSA:3.30.70.940 1 124 1.4E-31 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TP_0236 a11d1511c6db65c6df234c36a9185902 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site TP_0236 a11d1511c6db65c6df234c36a9185902 185 Pfam PF00467 KOW motif 134 164 1.6E-5 T 11-10-2018 IPR005824 KOW TP_0236 a11d1511c6db65c6df234c36a9185902 185 SUPERFAMILY SSF82679 3 118 1.26E-25 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TP_0277 bf178b8a5f74a69e0c0938ffa0d36528 448 SUPERFAMILY SSF50156 51 171 1.46E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TP_0277 bf178b8a5f74a69e0c0938ffa0d36528 448 SMART SM00245 142 333 7.2E-86 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TP_0277 bf178b8a5f74a69e0c0938ffa0d36528 448 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 17 343 7.3E-93 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 TP_0277 bf178b8a5f74a69e0c0938ffa0d36528 448 SMART SM00228 63 141 7.6E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0277 bf178b8a5f74a69e0c0938ffa0d36528 448 Gene3D G3DSA:3.30.750.44 6 308 4.5E-82 T 11-10-2018 TP_0277 bf178b8a5f74a69e0c0938ffa0d36528 448 SUPERFAMILY SSF52096 4 337 2.15E-63 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TP_0277 bf178b8a5f74a69e0c0938ffa0d36528 448 Gene3D G3DSA:2.30.42.10 63 156 4.5E-82 T 11-10-2018 TP_0277 bf178b8a5f74a69e0c0938ffa0d36528 448 Gene3D G3DSA:3.90.226.10 157 330 4.5E-82 T 11-10-2018 TP_0277 bf178b8a5f74a69e0c0938ffa0d36528 448 Pfam PF03572 Peptidase family S41 167 332 1.1E-50 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TP_0201 af382afc4410c1d5deaecc32da6dc7b8 185 SUPERFAMILY SSF55282 10 185 2.24E-70 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0201 af382afc4410c1d5deaecc32da6dc7b8 185 Gene3D G3DSA:3.30.1440.10 6 185 1.6E-72 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0201 af382afc4410c1d5deaecc32da6dc7b8 185 Pfam PF00673 ribosomal L5P family C-terminus 90 183 8.1E-38 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0201 af382afc4410c1d5deaecc32da6dc7b8 185 PIRSF PIRSF002161 5 185 4.8E-58 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0201 af382afc4410c1d5deaecc32da6dc7b8 185 Pfam PF00281 Ribosomal protein L5 31 86 2.1E-22 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0201 af382afc4410c1d5deaecc32da6dc7b8 185 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 7 185 41.441 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0201 af382afc4410c1d5deaecc32da6dc7b8 185 ProSitePatterns PS00358 Ribosomal protein L5 signature. 63 79 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0209 aced9e86611d50ec14a12ff8ed39f5f8 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.1E-22 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0209 aced9e86611d50ec14a12ff8ed39f5f8 37 SUPERFAMILY SSF57840 1 37 3.01E-15 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0209 aced9e86611d50ec14a12ff8ed39f5f8 37 Pfam PF00444 Ribosomal protein L36 1 37 6.0E-16 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0209 aced9e86611d50ec14a12ff8ed39f5f8 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0209 aced9e86611d50ec14a12ff8ed39f5f8 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 15.829 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0209 aced9e86611d50ec14a12ff8ed39f5f8 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 5.0E-9 T 11-10-2018 TP_0271 70c6b20560afa93604e39dc7f688e888 324 Gene3D G3DSA:3.90.1530.30 46 108 1.1E-22 T 11-10-2018 TP_0271 70c6b20560afa93604e39dc7f688e888 324 SUPERFAMILY SSF110849 33 125 4.97E-25 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TP_0271 70c6b20560afa93604e39dc7f688e888 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 33 207 3.3E-54 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TP_0271 70c6b20560afa93604e39dc7f688e888 324 Pfam PF02195 ParB-like nuclease domain 35 122 2.7E-24 T 11-10-2018 IPR003115 ParB/Sulfiredoxin TP_0271 70c6b20560afa93604e39dc7f688e888 324 SMART SM00470 33 123 1.0E-33 T 11-10-2018 IPR003115 ParB/Sulfiredoxin TP_0271 70c6b20560afa93604e39dc7f688e888 324 Gene3D G3DSA:1.10.10.2830 110 223 3.2E-37 T 11-10-2018 TP_0271 70c6b20560afa93604e39dc7f688e888 324 SUPERFAMILY SSF109709 115 224 2.43E-33 T 11-10-2018 TP_0477 ed374bb014cec8669a46d274484ba0eb 241 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 213 1.1E-52 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 TP_0477 ed374bb014cec8669a46d274484ba0eb 241 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 214 3.0E-59 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 TP_0477 ed374bb014cec8669a46d274484ba0eb 241 SUPERFAMILY SSF100950 1 214 1.34E-52 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TP_0477 ed374bb014cec8669a46d274484ba0eb 241 Gene3D G3DSA:3.40.50.1360 1 226 2.9E-64 T 11-10-2018 TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 SUPERFAMILY SSF52096 16 199 1.06E-66 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 Gene3D G3DSA:3.90.226.10 1 202 5.1E-78 T 11-10-2018 TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 PRINTS PR00127 Clp protease catalytic subunit P signature 64 84 2.5E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 PRINTS PR00127 Clp protease catalytic subunit P signature 116 135 2.5E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 PRINTS PR00127 Clp protease catalytic subunit P signature 95 112 2.5E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 PRINTS PR00127 Clp protease catalytic subunit P signature 24 39 2.5E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 PRINTS PR00127 Clp protease catalytic subunit P signature 173 192 2.5E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 95 106 - T 11-10-2018 IPR018215 ClpP, Ser active site TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 8 198 41.004 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 117 130 - T 11-10-2018 IPR033135 ClpP, histidine active site TP_0507 d1057d5ad54daedeaeb906311bc466f1 203 Pfam PF00574 Clp protease 18 197 4.0E-80 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TP_0978 fd0667e120b774f247e76de66ada6bb9 197 Pfam PF01252 Signal peptidase (SPase) II 29 175 2.0E-26 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TP_0978 fd0667e120b774f247e76de66ada6bb9 197 TIGRFAM TIGR00077 lspA: signal peptidase II 26 181 6.7E-28 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TP_0978 fd0667e120b774f247e76de66ada6bb9 197 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 116 131 4.2E-13 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TP_0978 fd0667e120b774f247e76de66ada6bb9 197 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 67 75 4.2E-13 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TP_0978 fd0667e120b774f247e76de66ada6bb9 197 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 157 173 4.2E-13 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TP_0978 fd0667e120b774f247e76de66ada6bb9 197 ProSitePatterns PS00855 Signal peptidases II signature. 119 131 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TP_0978 fd0667e120b774f247e76de66ada6bb9 197 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 19 182 14.063 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 214 317 5.0E-24 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 SUPERFAMILY SSF53738 32 241 1.94E-44 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 46 189 8.2E-44 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 147 156 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 330 450 2.1E-17 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 SUPERFAMILY SSF53738 213 321 6.28E-19 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 505 553 2.3E-6 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 SUPERFAMILY SSF55957 449 582 3.66E-9 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 301 316 4.6E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 146 160 4.6E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 254 4.6E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 Gene3D G3DSA:3.40.120.10 37 195 4.1E-46 T 11-10-2018 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 Gene3D G3DSA:3.40.120.10 213 329 2.4E-19 T 11-10-2018 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 SUPERFAMILY SSF53738 309 458 4.32E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0642 cf127b165728a3bb11c865d58c8f57cb 586 Gene3D G3DSA:3.40.120.10 330 457 5.6E-30 T 11-10-2018 TP_0533 965ca57c558276cdba2978f1ae161c6c 454 Pfam PF01496 V-type ATPase 116kDa subunit family 161 315 2.6E-17 T 11-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0536 61afa1be03a596a8339414b0f00409fc 133 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 7 75 1.8E-16 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TP_0536 61afa1be03a596a8339414b0f00409fc 133 Pfam PF03840 Preprotein translocase SecG subunit 8 73 1.2E-12 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TP_0333 5a98bcb0b1e7b8788ea24ddb2fdb4596 230 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 64 213 3.6E-8 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like TP_0333 5a98bcb0b1e7b8788ea24ddb2fdb4596 230 SUPERFAMILY SSF89392 33 224 2.43E-20 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TP_0333 5a98bcb0b1e7b8788ea24ddb2fdb4596 230 Gene3D G3DSA:2.50.20.10 31 224 2.1E-27 T 11-10-2018 TP_1017 abb45c2be72c6790ff48896bac669f90 605 SUPERFAMILY SSF55681 7 250 2.49E-75 T 11-10-2018 TP_1017 abb45c2be72c6790ff48896bac669f90 605 PRINTS PR00980 Alanyl-tRNA synthetase signature 204 215 1.6E-24 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TP_1017 abb45c2be72c6790ff48896bac669f90 605 PRINTS PR00980 Alanyl-tRNA synthetase signature 307 320 1.6E-24 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TP_1017 abb45c2be72c6790ff48896bac669f90 605 PRINTS PR00980 Alanyl-tRNA synthetase signature 231 244 1.6E-24 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TP_1017 abb45c2be72c6790ff48896bac669f90 605 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.6E-24 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TP_1017 abb45c2be72c6790ff48896bac669f90 605 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.6E-24 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TP_1017 abb45c2be72c6790ff48896bac669f90 605 Gene3D G3DSA:3.30.54.20 523 576 5.1E-49 T 11-10-2018 TP_1017 abb45c2be72c6790ff48896bac669f90 605 Gene3D G3DSA:3.30.930.10 5 247 3.3E-95 T 11-10-2018 TP_1017 abb45c2be72c6790ff48896bac669f90 605 SMART SM00863 552 595 3.1E-16 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TP_1017 abb45c2be72c6790ff48896bac669f90 605 Gene3D G3DSA:3.30.980.10 462 596 5.1E-49 T 11-10-2018 TP_1017 abb45c2be72c6790ff48896bac669f90 605 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 552 594 2.3E-15 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TP_1017 abb45c2be72c6790ff48896bac669f90 605 SUPERFAMILY SSF101353 251 448 3.01E-60 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 TP_1017 abb45c2be72c6790ff48896bac669f90 605 SUPERFAMILY SSF55186 460 598 2.09E-43 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TP_1017 abb45c2be72c6790ff48896bac669f90 605 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 10 445 7.9E-138 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TP_1017 abb45c2be72c6790ff48896bac669f90 605 Pfam PF01411 tRNA synthetases class II (A) 10 448 8.9E-136 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TP_1017 abb45c2be72c6790ff48896bac669f90 605 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 605 92.367 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 TP_0191 c97e271f41fc013c93f49613a3b0a837 94 Pfam PF00276 Ribosomal protein L23 5 88 5.1E-30 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TP_0191 c97e271f41fc013c93f49613a3b0a837 94 Gene3D G3DSA:3.30.70.330 2 93 2.0E-30 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TP_0191 c97e271f41fc013c93f49613a3b0a837 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 19.461 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TP_0191 c97e271f41fc013c93f49613a3b0a837 94 SUPERFAMILY SSF54189 1 90 2.27E-27 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0523 4fbeebb3e692d42f43f89904a1131256 384 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 9 376 6.0E-96 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0523 4fbeebb3e692d42f43f89904a1131256 384 Gene3D G3DSA:3.40.50.2000 178 343 3.9E-93 T 11-10-2018 TP_0523 4fbeebb3e692d42f43f89904a1131256 384 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 203 376 1.9E-38 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 TP_0523 4fbeebb3e692d42f43f89904a1131256 384 SUPERFAMILY SSF53756 14 380 6.68E-90 T 11-10-2018 TP_0523 4fbeebb3e692d42f43f89904a1131256 384 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 153 4.0E-42 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0523 4fbeebb3e692d42f43f89904a1131256 384 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 15 380 28.569 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0523 4fbeebb3e692d42f43f89904a1131256 384 Gene3D G3DSA:3.40.50.2000 16 177 3.9E-93 T 11-10-2018 TP_0373 f2af2bc5807deb9391bfa0c0ae94cae2 477 Gene3D G3DSA:3.40.50.620 11 224 7.0E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0373 f2af2bc5807deb9391bfa0c0ae94cae2 477 SUPERFAMILY SSF56037 391 465 2.88E-9 T 11-10-2018 TP_0373 f2af2bc5807deb9391bfa0c0ae94cae2 477 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 19 343 21.653 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TP_0373 f2af2bc5807deb9391bfa0c0ae94cae2 477 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 411 453 2.6E-8 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TP_0373 f2af2bc5807deb9391bfa0c0ae94cae2 477 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 31 219 1.0E-48 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TP_0373 f2af2bc5807deb9391bfa0c0ae94cae2 477 SUPERFAMILY SSF52402 30 235 1.81E-44 T 11-10-2018 TP_0373 f2af2bc5807deb9391bfa0c0ae94cae2 477 Pfam PF01171 PP-loop family 31 216 3.9E-55 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TP_0119 97c6921c611081d7a30d63fd9643f625 219 Gene3D G3DSA:1.10.3720.10 3 216 3.8E-40 T 11-10-2018 IPR035906 MetI-like superfamily TP_0119 97c6921c611081d7a30d63fd9643f625 219 SUPERFAMILY SSF161098 11 203 5.76E-36 T 11-10-2018 IPR035906 MetI-like superfamily TP_0119 97c6921c611081d7a30d63fd9643f625 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 1.6E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TP_0167 3541eee22fef3929b4164e19a2b1ad90 153 SUPERFAMILY SSF46785 8 66 2.73E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TP_0167 3541eee22fef3929b4164e19a2b1ad90 153 SMART SM00529 29 128 9.8E-47 T 11-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 TP_0167 3541eee22fef3929b4164e19a2b1ad90 153 Gene3D G3DSA:1.10.10.10 7 76 2.0E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0167 3541eee22fef3929b4164e19a2b1ad90 153 SUPERFAMILY SSF47979 68 142 5.49E-23 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 TP_0167 3541eee22fef3929b4164e19a2b1ad90 153 Gene3D G3DSA:1.10.60.10 77 142 9.4E-24 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 TP_0167 3541eee22fef3929b4164e19a2b1ad90 153 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 68 136 6.6E-24 T 11-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 TP_0167 3541eee22fef3929b4164e19a2b1ad90 153 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 9 64 2.1E-10 T 11-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 TP_1012 ba9d3e89c7a68d078222480b38961283 311 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 88 101 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 60 300 9.7E-32 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 Pfam PF04545 Sigma-70, region 4 247 298 1.1E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 Gene3D G3DSA:1.10.601.10 11 136 3.7E-33 T 11-10-2018 TP_1012 ba9d3e89c7a68d078222480b38961283 311 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 271 297 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 SUPERFAMILY SSF88946 23 133 4.45E-35 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 Gene3D G3DSA:1.10.10.10 227 311 2.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_1012 ba9d3e89c7a68d078222480b38961283 311 SUPERFAMILY SSF88659 213 309 4.3E-23 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TP_1012 ba9d3e89c7a68d078222480b38961283 311 PRINTS PR00046 Major sigma-70 factor signature 286 297 1.9E-20 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 PRINTS PR00046 Major sigma-70 factor signature 250 262 1.9E-20 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 PRINTS PR00046 Major sigma-70 factor signature 112 120 1.9E-20 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 PRINTS PR00046 Major sigma-70 factor signature 271 286 1.9E-20 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 PRINTS PR00046 Major sigma-70 factor signature 88 101 1.9E-20 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_1012 ba9d3e89c7a68d078222480b38961283 311 Pfam PF04542 Sigma-70 region 2 64 133 1.6E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TP_0233 35c243ea4480974f3d0aa679580a2d33 181 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 26 121 4.0E-17 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TP_0233 35c243ea4480974f3d0aa679580a2d33 181 Pfam PF01740 STAS domain 22 124 7.5E-18 T 11-10-2018 IPR002645 STAS domain TP_0233 35c243ea4480974f3d0aa679580a2d33 181 Gene3D G3DSA:3.30.750.24 18 132 1.1E-22 T 11-10-2018 IPR036513 STAS domain superfamily TP_0233 35c243ea4480974f3d0aa679580a2d33 181 SUPERFAMILY SSF52091 26 126 4.91E-23 T 11-10-2018 IPR036513 STAS domain superfamily TP_0705 461bb5eec889f42da05677705d60f4f4 884 SUPERFAMILY SSF56601 212 778 7.65E-103 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TP_0705 461bb5eec889f42da05677705d60f4f4 884 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 720 6.1E-201 T 11-10-2018 TP_0705 461bb5eec889f42da05677705d60f4f4 884 Pfam PF00905 Penicillin binding protein transpeptidase domain 411 684 1.5E-20 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TP_0705 461bb5eec889f42da05677705d60f4f4 884 Gene3D G3DSA:1.10.3810.10 48 246 5.8E-64 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0705 461bb5eec889f42da05677705d60f4f4 884 SUPERFAMILY SSF53955 43 249 7.31E-65 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TP_0705 461bb5eec889f42da05677705d60f4f4 884 Gene3D G3DSA:3.40.710.10 387 756 2.1E-86 T 11-10-2018 TP_0705 461bb5eec889f42da05677705d60f4f4 884 Gene3D G3DSA:3.40.710.10 259 333 3.8E-6 T 11-10-2018 TP_0705 461bb5eec889f42da05677705d60f4f4 884 Pfam PF00912 Transglycosylase 55 231 2.5E-58 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0786 6c7ca697b98c13163e40dfc80ebd92da 237 Pfam PF00005 ABC transporter 16 161 4.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0786 6c7ca697b98c13163e40dfc80ebd92da 237 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 211 232 2.1E-5 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TP_0786 6c7ca697b98c13163e40dfc80ebd92da 237 SMART SM00382 24 219 6.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0786 6c7ca697b98c13163e40dfc80ebd92da 237 SUPERFAMILY SSF52540 5 232 1.39E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0786 6c7ca697b98c13163e40dfc80ebd92da 237 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 237 1.4E-103 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 TP_0786 6c7ca697b98c13163e40dfc80ebd92da 237 Gene3D G3DSA:3.40.50.300 2 237 1.5E-64 T 11-10-2018 TP_0786 6c7ca697b98c13163e40dfc80ebd92da 237 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0917 627e92b64e3d35bc239c117d9c57e358 449 Pfam PF03448 MgtE intracellular N domain 27 128 1.3E-26 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TP_0917 627e92b64e3d35bc239c117d9c57e358 449 SMART SM00116 201 249 1.9E-7 T 11-10-2018 IPR000644 CBS domain TP_0917 627e92b64e3d35bc239c117d9c57e358 449 SUPERFAMILY SSF161093 273 445 6.02E-47 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 TP_0917 627e92b64e3d35bc239c117d9c57e358 449 Pfam PF00571 CBS domain 130 186 3.3E-4 T 11-10-2018 IPR000644 CBS domain TP_0917 627e92b64e3d35bc239c117d9c57e358 449 Pfam PF00571 CBS domain 196 248 1.1E-7 T 11-10-2018 IPR000644 CBS domain TP_0917 627e92b64e3d35bc239c117d9c57e358 449 Pfam PF01769 Divalent cation transporter 316 438 1.9E-26 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 TP_0917 627e92b64e3d35bc239c117d9c57e358 449 SUPERFAMILY SSF158791 2 127 1.7E-28 T 11-10-2018 TP_0917 627e92b64e3d35bc239c117d9c57e358 449 SMART SM00924 27 130 2.0E-30 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TP_0917 627e92b64e3d35bc239c117d9c57e358 449 TIGRFAM TIGR00400 mgtE: magnesium transporter 6 445 1.1E-139 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 TP_0917 627e92b64e3d35bc239c117d9c57e358 449 SUPERFAMILY SSF54631 130 268 4.67E-31 T 11-10-2018 TP_0917 627e92b64e3d35bc239c117d9c57e358 449 Gene3D G3DSA:1.25.60.10 2 125 1.2E-25 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily TP_0917 627e92b64e3d35bc239c117d9c57e358 449 Gene3D G3DSA:3.10.580.10 126 254 1.4E-42 T 11-10-2018 TP_0917 627e92b64e3d35bc239c117d9c57e358 449 Gene3D G3DSA:1.10.357.20 267 446 2.0E-56 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain TP_0783 d46bea48f2aabd2df10202d4e6116ceb 377 SUPERFAMILY SSF50969 118 291 2.98E-6 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TP_1004 f6d1ccfdde45a81bb9bb1edc39abf3d1 201 Gene3D G3DSA:1.10.8.420 1 50 1.9E-14 T 11-10-2018 TP_1004 f6d1ccfdde45a81bb9bb1edc39abf3d1 201 Pfam PF13662 Toprim domain 79 169 6.0E-19 T 11-10-2018 IPR006171 TOPRIM domain TP_1004 f6d1ccfdde45a81bb9bb1edc39abf3d1 201 SUPERFAMILY SSF111304 3 196 4.05E-67 T 11-10-2018 IPR023627 Recombination protein RecR TP_1004 f6d1ccfdde45a81bb9bb1edc39abf3d1 201 SMART SM00493 78 163 2.1E-13 T 11-10-2018 IPR006171 TOPRIM domain TP_1004 f6d1ccfdde45a81bb9bb1edc39abf3d1 201 Gene3D G3DSA:3.40.1360.10 75 196 3.3E-43 T 11-10-2018 TP_1004 f6d1ccfdde45a81bb9bb1edc39abf3d1 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 194 4.0E-83 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TP_1004 f6d1ccfdde45a81bb9bb1edc39abf3d1 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 87.247 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TP_1004 f6d1ccfdde45a81bb9bb1edc39abf3d1 201 ProSitePatterns PS01300 RecR protein signature. 55 76 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 TP_0165 db5e1ad4711ec6ec680b6e27ba5c7f94 298 SUPERFAMILY SSF81345 10 266 7.06E-25 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TP_0165 db5e1ad4711ec6ec680b6e27ba5c7f94 298 Pfam PF00950 ABC 3 transport family 10 275 2.3E-82 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TP_0165 db5e1ad4711ec6ec680b6e27ba5c7f94 298 Gene3D G3DSA:1.10.3470.10 42 278 3.4E-7 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TP_0412 ef5446c41b396ef55c78e3a3a822ad07 101 Pfam PF11680 Protein of unknown function (DUF3276) 6 85 7.4E-15 T 11-10-2018 IPR021694 Protein of unknown function DUF3276 TP_0412 ef5446c41b396ef55c78e3a3a822ad07 101 Gene3D G3DSA:3.10.450.700 1 78 2.0E-24 T 11-10-2018 TP_0412 ef5446c41b396ef55c78e3a3a822ad07 101 SMART SM00712 6 73 2.2E-27 T 11-10-2018 IPR006628 Purine-rich element binding protein family TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 ProSitePatterns PS00323 Ribosomal protein S19 signature. 56 80 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 PRINTS PR00975 Ribosomal protein S19 family signature 56 68 8.0E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 PRINTS PR00975 Ribosomal protein S19 family signature 36 55 8.0E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 PRINTS PR00975 Ribosomal protein S19 family signature 68 83 8.0E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 95 2.0E-45 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 Gene3D G3DSA:3.30.860.10 1 95 8.2E-35 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 Pfam PF00203 Ribosomal protein S19 3 86 2.2E-33 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 92 25.155 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 PIRSF PIRSF002144 1 94 6.5E-30 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0193 41a03392a4c22ad3eb030825e8c242b8 95 SUPERFAMILY SSF54570 2 87 1.44E-30 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0712 4c48910c0107c1b50ab881a8f51fb9e9 304 PIRSF PIRSF003092 13 303 1.0E-82 T 11-10-2018 IPR025501 ATP binding protein MinD TP_0712 4c48910c0107c1b50ab881a8f51fb9e9 304 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 42 259 5.2E-19 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TP_0712 4c48910c0107c1b50ab881a8f51fb9e9 304 Gene3D G3DSA:3.40.50.300 39 281 1.5E-51 T 11-10-2018 TP_0712 4c48910c0107c1b50ab881a8f51fb9e9 304 SUPERFAMILY SSF52540 39 283 1.16E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0396 460b4b56b4c30e19ad7b68a032f3047c 136 Pfam PF00460 Flagella basal body rod protein 14 38 6.1E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TP_0396 460b4b56b4c30e19ad7b68a032f3047c 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TP_0396 460b4b56b4c30e19ad7b68a032f3047c 136 PIRSF PIRSF002889 1 136 1.2E-22 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TP_0396 460b4b56b4c30e19ad7b68a032f3047c 136 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 136 5.0E-44 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TP_0410 cf0040615424e192940b648500900aa7 583 SUPERFAMILY SSF82866 372 563 3.4E-40 T 11-10-2018 TP_0410 cf0040615424e192940b648500900aa7 583 Pfam PF02355 Protein export membrane protein 394 559 7.2E-20 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TP_0410 cf0040615424e192940b648500900aa7 583 Gene3D G3DSA:3.30.1360.200 282 387 1.4E-26 T 11-10-2018 TP_0410 cf0040615424e192940b648500900aa7 583 Gene3D G3DSA:3.30.70.3400 145 240 1.7E-20 T 11-10-2018 TP_0410 cf0040615424e192940b648500900aa7 583 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 577 40.164 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TP_0410 cf0040615424e192940b648500900aa7 583 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 326 555 4.1E-81 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TP_0410 cf0040615424e192940b648500900aa7 583 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 145 561 2.7E-144 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TP_0410 cf0040615424e192940b648500900aa7 583 Gene3D G3DSA:1.20.1640.10 388 570 3.1E-16 T 11-10-2018 TP_0646 e5c9791ae9f3054be8503c3c0df4fffd 440 Gene3D G3DSA:2.120.10.30 74 281 5.8E-7 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TP_0646 e5c9791ae9f3054be8503c3c0df4fffd 440 SUPERFAMILY SSF63825 99 343 2.07E-7 T 11-10-2018 TP_0358 7b428cf30d0bc3c3d0a92d92a316653b 526 SUPERFAMILY SSF88688 416 524 1.93E-29 T 11-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily TP_0358 7b428cf30d0bc3c3d0a92d92a316653b 526 Gene3D G3DSA:3.20.110.10 7 402 1.5E-94 T 11-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily TP_0358 7b428cf30d0bc3c3d0a92d92a316653b 526 Pfam PF09210 Domain of unknown function (DUF1957) 423 522 1.3E-25 T 11-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TP_0358 7b428cf30d0bc3c3d0a92d92a316653b 526 Pfam PF03065 Glycosyl hydrolase family 57 10 218 3.6E-17 T 11-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 TP_0358 7b428cf30d0bc3c3d0a92d92a316653b 526 Gene3D G3DSA:1.20.1430.10 415 526 7.7E-26 T 11-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TP_0358 7b428cf30d0bc3c3d0a92d92a316653b 526 SUPERFAMILY SSF88713 8 407 2.45E-79 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TP_0770 a1277bf68031ff24ec3946071ce55ac8 649 SMART SM00487 65 263 4.4E-55 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TP_0770 a1277bf68031ff24ec3946071ce55ac8 649 SMART SM00490 299 380 4.5E-34 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0770 a1277bf68031ff24ec3946071ce55ac8 649 Pfam PF00271 Helicase conserved C-terminal domain 271 380 6.1E-30 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0770 a1277bf68031ff24ec3946071ce55ac8 649 Gene3D G3DSA:3.40.50.300 44 251 9.6E-68 T 11-10-2018 TP_0770 a1277bf68031ff24ec3946071ce55ac8 649 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 194 202 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TP_0770 a1277bf68031ff24ec3946071ce55ac8 649 Pfam PF03880 DbpA RNA binding domain 523 580 6.1E-7 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain TP_0770 a1277bf68031ff24ec3946071ce55ac8 649 Pfam PF00270 DEAD/DEAH box helicase 70 234 9.1E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TP_0770 a1277bf68031ff24ec3946071ce55ac8 649 SUPERFAMILY SSF52540 116 399 1.43E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0770 a1277bf68031ff24ec3946071ce55ac8 649 Gene3D G3DSA:3.40.50.300 257 462 9.3E-50 T 11-10-2018 TP_0470 7c67d3fb284c76d19108f6fcde19f54f 369 Gene3D G3DSA:1.25.40.10 100 189 1.4E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0470 7c67d3fb284c76d19108f6fcde19f54f 369 SUPERFAMILY SSF48452 36 194 1.59E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0470 7c67d3fb284c76d19108f6fcde19f54f 369 Pfam PF14559 Tetratricopeptide repeat 48 99 2.5E-7 T 11-10-2018 TP_0470 7c67d3fb284c76d19108f6fcde19f54f 369 Gene3D G3DSA:1.25.40.10 27 98 7.2E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0470 7c67d3fb284c76d19108f6fcde19f54f 369 SMART SM00028 72 105 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0470 7c67d3fb284c76d19108f6fcde19f54f 369 SMART SM00028 141 174 2.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0470 7c67d3fb284c76d19108f6fcde19f54f 369 SMART SM00028 107 140 0.0029 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0470 7c67d3fb284c76d19108f6fcde19f54f 369 Pfam PF00515 Tetratricopeptide repeat 111 140 4.7E-7 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TP_0977 e1a35abd3a29b0e96ea17e6faaf66f59 286 SUPERFAMILY SSF102705 1 282 4.58E-63 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily TP_0977 e1a35abd3a29b0e96ea17e6faaf66f59 286 Gene3D G3DSA:3.40.1390.30 1 108 2.5E-28 T 11-10-2018 TP_0977 e1a35abd3a29b0e96ea17e6faaf66f59 286 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 23 272 1.6E-50 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TP_0977 e1a35abd3a29b0e96ea17e6faaf66f59 286 Gene3D G3DSA:3.40.1390.30 158 257 4.1E-21 T 11-10-2018 TP_0977 e1a35abd3a29b0e96ea17e6faaf66f59 286 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 284 1.5E-48 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TP_0627 6139067e2eee48475a1a6c6fdb0f55c7 1047 Gene3D G3DSA:3.40.50.300 728 1043 3.6E-25 T 11-10-2018 TP_0627 6139067e2eee48475a1a6c6fdb0f55c7 1047 Gene3D G3DSA:3.40.50.300 2 374 7.9E-31 T 11-10-2018 TP_0627 6139067e2eee48475a1a6c6fdb0f55c7 1047 Pfam PF13476 AAA domain 5 239 1.8E-16 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain TP_0627 6139067e2eee48475a1a6c6fdb0f55c7 1047 SUPERFAMILY SSF52540 4 1045 3.12E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0627 6139067e2eee48475a1a6c6fdb0f55c7 1047 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1042 0.0 T 11-10-2018 IPR004592 Nuclease SbcC, gammaproteobacteria type TP_0627 6139067e2eee48475a1a6c6fdb0f55c7 1047 Pfam PF13558 Putative exonuclease SbcCD, C subunit 944 1004 3.2E-11 T 11-10-2018 TP_0685 d6a73567fd520e15e7154a37bbbeb3d5 496 Pfam PF00005 ABC transporter 20 169 2.6E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0685 d6a73567fd520e15e7154a37bbbeb3d5 496 Gene3D G3DSA:3.40.50.300 257 491 7.6E-42 T 11-10-2018 TP_0685 d6a73567fd520e15e7154a37bbbeb3d5 496 SMART SM00382 29 218 4.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0685 d6a73567fd520e15e7154a37bbbeb3d5 496 SMART SM00382 279 473 8.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0685 d6a73567fd520e15e7154a37bbbeb3d5 496 SUPERFAMILY SSF52540 4 227 2.66E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0685 d6a73567fd520e15e7154a37bbbeb3d5 496 Gene3D G3DSA:3.40.50.300 2 241 1.2E-52 T 11-10-2018 TP_0685 d6a73567fd520e15e7154a37bbbeb3d5 496 SUPERFAMILY SSF52540 249 475 3.86E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0685 d6a73567fd520e15e7154a37bbbeb3d5 496 Pfam PF00005 ABC transporter 270 424 1.4E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0685 d6a73567fd520e15e7154a37bbbeb3d5 496 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0384 09ba4271da45bcaa5dc9dcb2173498c9 379 SUPERFAMILY SSF53335 29 378 2.71E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0384 09ba4271da45bcaa5dc9dcb2173498c9 379 Gene3D G3DSA:3.40.50.150 58 375 5.4E-73 T 11-10-2018 TP_0384 09ba4271da45bcaa5dc9dcb2173498c9 379 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 29 379 31.848 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TP_0384 09ba4271da45bcaa5dc9dcb2173498c9 379 Pfam PF01795 MraW methylase family 27 379 6.4E-127 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TP_0384 09ba4271da45bcaa5dc9dcb2173498c9 379 Gene3D G3DSA:1.10.150.170 168 285 5.4E-73 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TP_0384 09ba4271da45bcaa5dc9dcb2173498c9 379 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 153 378 5.4E-63 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TP_0384 09ba4271da45bcaa5dc9dcb2173498c9 379 SUPERFAMILY SSF81799 170 283 8.11E-25 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TP_0464 c7c41b483c94aec51377613c6bd7bf13 250 Pfam PF02390 Putative methyltransferase 81 244 1.1E-54 T 11-10-2018 TP_0464 c7c41b483c94aec51377613c6bd7bf13 250 Gene3D G3DSA:3.40.50.150 24 250 4.1E-53 T 11-10-2018 TP_0464 c7c41b483c94aec51377613c6bd7bf13 250 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 15 250 28.582 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TP_0464 c7c41b483c94aec51377613c6bd7bf13 250 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 81 244 7.0E-36 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TP_0464 c7c41b483c94aec51377613c6bd7bf13 250 SUPERFAMILY SSF53335 76 248 1.19E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0895 c64d4305d142ea04acf0d3c73f8c417f 168 Gene3D G3DSA:3.30.310.70 45 168 4.9E-11 T 11-10-2018 IPR035923 TT1751-like domain superfamily TP_0895 c64d4305d142ea04acf0d3c73f8c417f 168 Pfam PF03625 Domain of unknown function DUF302 78 137 2.5E-9 T 11-10-2018 IPR005180 Domain of unknown function DUF302 TP_0895 c64d4305d142ea04acf0d3c73f8c417f 168 SUPERFAMILY SSF103247 47 167 9.81E-22 T 11-10-2018 IPR035923 TT1751-like domain superfamily TP_0637 6166d7d098d27c91fdb64c71826f27c0 316 Pfam PF01715 IPP transferase 55 298 9.9E-53 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TP_0637 6166d7d098d27c91fdb64c71826f27c0 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 23 309 3.7E-53 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TP_0637 6166d7d098d27c91fdb64c71826f27c0 316 SUPERFAMILY SSF52540 24 150 5.72E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0637 6166d7d098d27c91fdb64c71826f27c0 316 Gene3D G3DSA:1.10.20.140 128 198 6.7E-70 T 11-10-2018 TP_0637 6166d7d098d27c91fdb64c71826f27c0 316 Gene3D G3DSA:3.40.50.300 26 305 6.7E-70 T 11-10-2018 TP_0637 6166d7d098d27c91fdb64c71826f27c0 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 22 316 22.133 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TP_0445 4f47517d377140d18bb1596472659b6d 209 SUPERFAMILY SSF52317 4 207 1.24E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TP_0445 4f47517d377140d18bb1596472659b6d 209 Gene3D G3DSA:3.40.50.880 2 209 8.4E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TP_0445 4f47517d377140d18bb1596472659b6d 209 Pfam PF01965 DJ-1/PfpI family 4 191 1.3E-48 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TP_1015 599f1479fa2d1ce0e49dc0e2d28becc8 141 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 140 8.8E-37 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 TP_1015 599f1479fa2d1ce0e49dc0e2d28becc8 141 Gene3D G3DSA:1.10.940.10 8 141 8.3E-39 T 11-10-2018 IPR035926 NusB-like superfamily TP_1015 599f1479fa2d1ce0e49dc0e2d28becc8 141 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 141 19.197 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 TP_1015 599f1479fa2d1ce0e49dc0e2d28becc8 141 Pfam PF01029 NusB family 11 139 1.3E-33 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TP_1015 599f1479fa2d1ce0e49dc0e2d28becc8 141 SUPERFAMILY SSF48013 9 140 2.35E-36 T 11-10-2018 IPR035926 NusB-like superfamily TP_0906 e6f32652b73829a575c5c078a0c0d9da 80 SUPERFAMILY SSF54814 10 66 3.2E-6 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TP_0906 e6f32652b73829a575c5c078a0c0d9da 80 Hamap MF_00088 UPF0109 protein . 5 79 21.9 T 11-10-2018 IPR020627 Uncharacterised protein family UPF0109 TP_0906 e6f32652b73829a575c5c078a0c0d9da 80 Pfam PF13083 KH domain 6 78 6.5E-21 T 11-10-2018 TP_0906 e6f32652b73829a575c5c078a0c0d9da 80 Gene3D G3DSA:3.30.300.20 3 80 5.5E-5 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 Gene3D G3DSA:3.50.30.10 364 494 2.1E-26 T 11-10-2018 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 SUPERFAMILY SSF51621 520 879 5.76E-105 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 Gene3D G3DSA:3.30.1490.20 22 209 8.0E-7 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 437 448 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 PIRSF PIRSF000853 3 883 7.6E-281 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 SUPERFAMILY SSF52009 381 483 3.53E-12 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 Gene3D G3DSA:1.10.189.10 328 505 2.1E-26 T 11-10-2018 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 SUPERFAMILY SSF56059 19 360 5.65E-41 T 11-10-2018 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 Gene3D G3DSA:1.20.80.30 109 195 8.0E-7 T 11-10-2018 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 Pfam PF00391 PEP-utilising enzyme, mobile domain 410 482 8.5E-8 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 521 874 1.1E-78 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 Gene3D G3DSA:3.20.20.60 521 877 9.3E-133 T 11-10-2018 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 Gene3D G3DSA:3.30.470.20 231 320 5.4E-10 T 11-10-2018 TP_0746 9a879c27e7518fd5b15a04cf19d6b083 901 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 766 784 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TP_0729 a40a6e2d4df22ec61270908349f7e9cd 547 Gene3D G3DSA:3.30.750.140 398 513 6.4E-9 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily TP_0729 a40a6e2d4df22ec61270908349f7e9cd 547 Pfam PF02120 Flagellar hook-length control protein FliK 425 494 4.9E-13 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal TP_0854 36686a38cfb3f1b9d5bc8b461b768ddf 1533 SMART SM00304 1104 1161 4.3E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TP_0854 36686a38cfb3f1b9d5bc8b461b768ddf 1533 SMART SM00331 1195 1418 9.6E-56 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0854 36686a38cfb3f1b9d5bc8b461b768ddf 1533 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 1222 1380 2.4E-26 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0854 36686a38cfb3f1b9d5bc8b461b768ddf 1533 SUPERFAMILY SSF81606 1212 1368 8.11E-6 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0854 36686a38cfb3f1b9d5bc8b461b768ddf 1533 SUPERFAMILY SSF50939 68 280 1.5E-15 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 TP_0854 36686a38cfb3f1b9d5bc8b461b768ddf 1533 Gene3D G3DSA:3.60.40.10 1157 1408 4.7E-41 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0854 36686a38cfb3f1b9d5bc8b461b768ddf 1533 Gene3D G3DSA:2.120.10.10 39 267 5.5E-10 T 11-10-2018 TP_0854 36686a38cfb3f1b9d5bc8b461b768ddf 1533 Pfam PF00672 HAMP domain 1106 1156 2.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TP_0613 6179d7365c0eed326abe1fa5d5acb635 382 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 77 365 7.7E-92 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 TP_0613 6179d7365c0eed326abe1fa5d5acb635 382 Pfam PF01458 Uncharacterized protein family (UPF0051) 112 347 4.1E-45 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TP_0613 6179d7365c0eed326abe1fa5d5acb635 382 SUPERFAMILY SSF101960 62 374 1.83E-60 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily TP_0694 556b3d051fbaf9210e4e16a4548bc2cc 225 PIRSF PIRSF006806 1 210 3.3E-30 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TP_0694 556b3d051fbaf9210e4e16a4548bc2cc 225 SUPERFAMILY SSF100950 4 214 9.35E-39 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TP_0694 556b3d051fbaf9210e4e16a4548bc2cc 225 Gene3D G3DSA:3.40.50.10420 2 220 2.6E-39 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily TP_0694 556b3d051fbaf9210e4e16a4548bc2cc 225 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 207 1.1E-52 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 364 4.1E-9 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 SUPERFAMILY SSF48019 245 365 5.67E-12 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 2.7E-127 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 Pfam PF13177 DNA polymerase III, delta subunit 20 176 2.4E-42 T 11-10-2018 TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 Gene3D G3DSA:3.40.50.300 13 177 7.6E-95 T 11-10-2018 TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 2.0E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 2.0E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 SMART SM00382 37 179 2.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 Gene3D G3DSA:1.10.8.60 9 238 7.6E-95 T 11-10-2018 TP_1005 ef45a5bb83c9c0cb602b69809fe37914 572 SUPERFAMILY SSF52540 34 225 1.05E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0252 0505f9bce35e730b95327a98954857ce 546 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 67 484 7.3E-127 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TP_0252 0505f9bce35e730b95327a98954857ce 546 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 14 522 17.246 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TP_0252 0505f9bce35e730b95327a98954857ce 546 SUPERFAMILY SSF56317 230 502 3.66E-41 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TP_0252 0505f9bce35e730b95327a98954857ce 546 Gene3D G3DSA:3.60.110.10 264 513 3.1E-18 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TP_0252 0505f9bce35e730b95327a98954857ce 546 Pfam PF00795 Carbon-nitrogen hydrolase 234 505 3.7E-25 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TP_0371 96faded1b6867bd6102a857c4b38267a 291 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 290 27.956 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TP_0371 96faded1b6867bd6102a857c4b38267a 291 Gene3D G3DSA:3.30.70.890 164 290 4.3E-19 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TP_0371 96faded1b6867bd6102a857c4b38267a 291 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 274 5.5E-42 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TP_0371 96faded1b6867bd6102a857c4b38267a 291 Pfam PF00288 GHMP kinases N terminal domain 87 140 2.1E-7 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TP_0371 96faded1b6867bd6102a857c4b38267a 291 Pfam PF08544 GHMP kinases C terminal 226 272 3.1E-4 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain TP_0371 96faded1b6867bd6102a857c4b38267a 291 SUPERFAMILY SSF55060 165 289 2.54E-19 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TP_0371 96faded1b6867bd6102a857c4b38267a 291 SUPERFAMILY SSF54211 4 158 8.35E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0371 96faded1b6867bd6102a857c4b38267a 291 Gene3D G3DSA:3.30.230.10 1 159 3.9E-45 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_0371 96faded1b6867bd6102a857c4b38267a 291 PIRSF PIRSF010376 2 290 2.4E-70 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TP_0147 34e26507e1954f6d26389df711903f48 619 Gene3D G3DSA:3.20.110.20 17 352 1.3E-38 T 11-10-2018 TP_0147 34e26507e1954f6d26389df711903f48 619 Pfam PF03065 Glycosyl hydrolase family 57 12 349 7.6E-61 T 11-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 TP_0147 34e26507e1954f6d26389df711903f48 619 SUPERFAMILY SSF74650 363 574 2.42E-49 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TP_0147 34e26507e1954f6d26389df711903f48 619 SUPERFAMILY SSF88713 15 269 6.35E-43 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TP_0147 34e26507e1954f6d26389df711903f48 619 Gene3D G3DSA:2.70.98.10 417 606 1.8E-7 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TP_0147 34e26507e1954f6d26389df711903f48 619 Pfam PF09095 Domain of unknown function (DUF1926) 442 576 2.1E-9 T 11-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 TP_0028 57542c0bb0bcde05fc873b5adabd12da 453 SMART SM01091 369 447 5.6E-18 T 11-10-2018 IPR005170 Transporter-associated domain TP_0028 57542c0bb0bcde05fc873b5adabd12da 453 Gene3D G3DSA:3.10.580.10 180 344 2.3E-22 T 11-10-2018 TP_0028 57542c0bb0bcde05fc873b5adabd12da 453 Pfam PF03471 Transporter associated domain 371 444 5.5E-17 T 11-10-2018 IPR005170 Transporter-associated domain TP_0028 57542c0bb0bcde05fc873b5adabd12da 453 SUPERFAMILY SSF56176 371 443 7.63E-15 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TP_0028 57542c0bb0bcde05fc873b5adabd12da 453 SUPERFAMILY SSF54631 188 337 2.61E-18 T 11-10-2018 TP_0028 57542c0bb0bcde05fc873b5adabd12da 453 Pfam PF01595 Domain of unknown function DUF21 11 185 1.9E-42 T 11-10-2018 IPR002550 CNNM, transmembrane domain TP_0028 57542c0bb0bcde05fc873b5adabd12da 453 Gene3D G3DSA:3.30.465.10 362 445 7.7E-16 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TP_0139 0f2415c37bd1b96f3d19eef4be516edf 230 Gene3D G3DSA:3.30.70.1450 140 229 5.9E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TP_0139 0f2415c37bd1b96f3d19eef4be516edf 230 Pfam PF02254 TrkA-N domain 7 121 1.8E-21 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TP_0139 0f2415c37bd1b96f3d19eef4be516edf 230 SUPERFAMILY SSF51735 6 137 3.94E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0139 0f2415c37bd1b96f3d19eef4be516edf 230 SUPERFAMILY SSF116726 133 229 7.32E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TP_0139 0f2415c37bd1b96f3d19eef4be516edf 230 Gene3D G3DSA:3.40.50.720 2 139 2.7E-25 T 11-10-2018 TP_0144 a7978d4d1aa0133c625ebd90798efa3f 335 Gene3D G3DSA:3.40.190.10 134 325 2.2E-80 T 11-10-2018 TP_0144 a7978d4d1aa0133c625ebd90798efa3f 335 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 28 320 4.5E-56 T 11-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 TP_0144 a7978d4d1aa0133c625ebd90798efa3f 335 SUPERFAMILY SSF53850 29 312 5.24E-51 T 11-10-2018 TP_0144 a7978d4d1aa0133c625ebd90798efa3f 335 Gene3D G3DSA:3.40.190.10 32 310 2.2E-80 T 11-10-2018 TP_0144 a7978d4d1aa0133c625ebd90798efa3f 335 Pfam PF13343 Bacterial extracellular solute-binding protein 87 301 2.2E-19 T 11-10-2018 TP_0528 c872f11f14351698021ec84a862663e2 480 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 70 6.4E-10 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0528 c872f11f14351698021ec84a862663e2 480 SUPERFAMILY SSF52540 79 355 5.84E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0528 c872f11f14351698021ec84a862663e2 480 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 3 459 58.271 T 11-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0528 c872f11f14351698021ec84a862663e2 480 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 350 2.4E-65 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0528 c872f11f14351698021ec84a862663e2 480 Gene3D G3DSA:3.40.50.12240 3 459 2.6E-163 T 11-10-2018 TP_0842 4231403b2df7e7622a686245d75c9397 255 SUPERFAMILY SSF55920 1 246 4.58E-74 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like TP_0842 4231403b2df7e7622a686245d75c9397 255 Gene3D G3DSA:3.90.230.10 1 253 1.2E-89 T 11-10-2018 TP_0842 4231403b2df7e7622a686245d75c9397 255 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.7E-79 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TP_0842 4231403b2df7e7622a686245d75c9397 255 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 37.293 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TP_0842 4231403b2df7e7622a686245d75c9397 255 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 164 182 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TP_0842 4231403b2df7e7622a686245d75c9397 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 7.0E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TP_0842 4231403b2df7e7622a686245d75c9397 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 7.0E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TP_0842 4231403b2df7e7622a686245d75c9397 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 7.0E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TP_0842 4231403b2df7e7622a686245d75c9397 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 7.0E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TP_0842 4231403b2df7e7622a686245d75c9397 255 Pfam PF00557 Metallopeptidase family M24 12 237 4.7E-46 T 11-10-2018 IPR000994 Peptidase M24 TP_0372 65844239d35c62ebc67793cc5ea42531 196 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 181 1.1E-17 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain TP_0372 65844239d35c62ebc67793cc5ea42531 196 Gene3D G3DSA:2.170.120.20 99 188 2.8E-18 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal TP_0372 65844239d35c62ebc67793cc5ea42531 196 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 96 5.0E-47 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TP_0372 65844239d35c62ebc67793cc5ea42531 196 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 184 23.251 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TP_0372 65844239d35c62ebc67793cc5ea42531 196 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 181 3.4E-65 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TP_0372 65844239d35c62ebc67793cc5ea42531 196 SUPERFAMILY SSF50715 4 186 5.23E-41 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TP_0372 65844239d35c62ebc67793cc5ea42531 196 Gene3D G3DSA:2.40.240.10 8 96 3.4E-18 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TP_0372 65844239d35c62ebc67793cc5ea42531 196 Pfam PF01386 Ribosomal L25p family 6 93 2.4E-18 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TP_0052 f40861d388286ee12bad904fe68bb007 348 SUPERFAMILY SSF53335 33 332 7.12E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0052 f40861d388286ee12bad904fe68bb007 348 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 21 336 40.871 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TP_0052 f40861d388286ee12bad904fe68bb007 348 Gene3D G3DSA:3.40.50.150 106 336 1.6E-47 T 11-10-2018 TP_0052 f40861d388286ee12bad904fe68bb007 348 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 25 338 3.7E-48 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 TP_0052 f40861d388286ee12bad904fe68bb007 348 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 43 332 3.7E-77 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TP_0052 f40861d388286ee12bad904fe68bb007 348 Gene3D G3DSA:1.10.8.10 23 103 6.8E-13 T 11-10-2018 TP_0496 7bd22650f4e512d5cc6a16f641a02cd2 329 SMART SM00028 182 215 0.26 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0496 7bd22650f4e512d5cc6a16f641a02cd2 329 SMART SM00028 252 285 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0496 7bd22650f4e512d5cc6a16f641a02cd2 329 SMART SM00028 286 319 0.15 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0496 7bd22650f4e512d5cc6a16f641a02cd2 329 SUPERFAMILY SSF48452 186 318 3.48E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0496 7bd22650f4e512d5cc6a16f641a02cd2 329 Gene3D G3DSA:1.25.40.10 72 243 7.2E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0496 7bd22650f4e512d5cc6a16f641a02cd2 329 Gene3D G3DSA:1.25.40.10 244 328 5.0E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0227 fdd09f66dfe6b9bc38d75687fdf178b3 255 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0227 fdd09f66dfe6b9bc38d75687fdf178b3 255 Gene3D G3DSA:3.40.50.300 18 238 2.3E-57 T 11-10-2018 TP_0227 fdd09f66dfe6b9bc38d75687fdf178b3 255 Pfam PF00005 ABC transporter 35 170 7.0E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0227 fdd09f66dfe6b9bc38d75687fdf178b3 255 SMART SM00382 44 224 3.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0227 fdd09f66dfe6b9bc38d75687fdf178b3 255 SUPERFAMILY SSF52540 17 231 2.15E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0068 4ee14bd4f8dca935d1e95df21bd78ec4 340 Gene3D G3DSA:3.20.20.70 64 325 3.4E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0068 4ee14bd4f8dca935d1e95df21bd78ec4 340 Pfam PF04055 Radical SAM superfamily 107 266 7.5E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TP_0068 4ee14bd4f8dca935d1e95df21bd78ec4 340 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 340 61.553 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TP_0068 4ee14bd4f8dca935d1e95df21bd78ec4 340 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 23 335 1.0E-91 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TP_0068 4ee14bd4f8dca935d1e95df21bd78ec4 340 PIRSF PIRSF006004 4 339 4.2E-114 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 TP_0068 4ee14bd4f8dca935d1e95df21bd78ec4 340 SUPERFAMILY SSF102114 100 316 3.27E-17 T 11-10-2018 TP_0068 4ee14bd4f8dca935d1e95df21bd78ec4 340 Gene3D G3DSA:1.10.150.530 6 62 3.2E-8 T 11-10-2018 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 SMART SM01086 711 800 2.2E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Gene3D G3DSA:1.10.8.60 711 806 1.4E-22 T 11-10-2018 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Gene3D G3DSA:1.10.8.60 344 432 1.5E-25 T 11-10-2018 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 SMART SM00382 534 683 1.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 SMART SM00382 200 344 6.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 583 601 1.9E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 538 556 1.9E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 612 630 1.9E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 645 659 1.9E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 711 791 2.2E-20 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 SUPERFAMILY SSF81923 13 140 2.88E-16 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 67 5.9E-8 T 11-10-2018 IPR004176 Clp, N-terminal TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 140 3.4E-9 T 11-10-2018 IPR004176 Clp, N-terminal TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Pfam PF07724 AAA domain (Cdc48 subfamily) 533 704 1.1E-47 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Gene3D G3DSA:3.40.50.300 150 343 9.6E-69 T 11-10-2018 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 SUPERFAMILY SSF52540 483 773 7.3E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 336 2.9E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Gene3D G3DSA:1.10.1780.10 1 148 2.3E-20 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 Gene3D G3DSA:3.40.50.300 465 710 9.1E-81 T 11-10-2018 TP_0549 e8471fb862a7d3bc9bb853c4e28cb325 814 SUPERFAMILY SSF52540 162 461 1.76E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0631 819bc70ad216f1d6fedb76fc256c0979 403 Gene3D G3DSA:3.40.50.180 206 399 7.7E-68 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal TP_0631 819bc70ad216f1d6fedb76fc256c0979 403 Pfam PF00072 Response regulator receiver domain 9 116 9.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TP_0631 819bc70ad216f1d6fedb76fc256c0979 403 Gene3D G3DSA:3.40.50.2300 4 148 2.4E-29 T 11-10-2018 TP_0631 819bc70ad216f1d6fedb76fc256c0979 403 SMART SM00448 7 122 1.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TP_0631 819bc70ad216f1d6fedb76fc256c0979 403 PIRSF PIRSF000876 4 402 4.7E-135 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TP_0631 819bc70ad216f1d6fedb76fc256c0979 403 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 7 398 37.587 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TP_0631 819bc70ad216f1d6fedb76fc256c0979 403 SUPERFAMILY SSF52738 210 396 1.57E-64 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal TP_0631 819bc70ad216f1d6fedb76fc256c0979 403 SUPERFAMILY SSF52172 6 129 6.69E-29 T 11-10-2018 IPR011006 CheY-like superfamily TP_0631 819bc70ad216f1d6fedb76fc256c0979 403 Pfam PF01339 CheB methylesterase 214 393 1.8E-59 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TP_0796 67eae5f2a297640aac9fadeb518481af 362 SUPERFAMILY SSF143631 32 348 4.8E-88 T 11-10-2018 IPR003374 ApbE-like superfamily TP_0796 67eae5f2a297640aac9fadeb518481af 362 Gene3D G3DSA:3.10.520.20 23 362 1.2E-136 T 11-10-2018 TP_0796 67eae5f2a297640aac9fadeb518481af 362 PIRSF PIRSF006268 1 355 7.8E-96 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TP_0796 67eae5f2a297640aac9fadeb518481af 362 Pfam PF02424 ApbE family 40 334 2.2E-80 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TP_0981 de8d555e7afca3505323e1a902af064c 387 Gene3D G3DSA:3.30.450.40 46 217 3.7E-13 T 11-10-2018 IPR029016 GAF-like domain superfamily TP_0981 de8d555e7afca3505323e1a902af064c 387 Gene3D G3DSA:3.30.70.270 218 384 3.7E-53 T 11-10-2018 TP_0981 de8d555e7afca3505323e1a902af064c 387 SUPERFAMILY SSF55781 54 220 2.4E-12 T 11-10-2018 TP_0981 de8d555e7afca3505323e1a902af064c 387 SUPERFAMILY SSF55073 224 379 3.22E-45 T 11-10-2018 IPR029787 Nucleotide cyclase TP_0981 de8d555e7afca3505323e1a902af064c 387 SMART SM00267 206 378 5.3E-57 T 11-10-2018 IPR000160 GGDEF domain TP_0981 de8d555e7afca3505323e1a902af064c 387 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 216 378 2.4E-49 T 11-10-2018 IPR000160 GGDEF domain TP_0981 de8d555e7afca3505323e1a902af064c 387 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 374 8.2E-47 T 11-10-2018 IPR000160 GGDEF domain TP_0091 a5405520033b4f8958962ce97f30f109 520 Gene3D G3DSA:1.20.120.1910 342 520 9.0E-26 T 11-10-2018 TP_0091 a5405520033b4f8958962ce97f30f109 520 SUPERFAMILY SSF47323 396 519 4.05E-21 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0091 a5405520033b4f8958962ce97f30f109 520 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 240 261 3.8E-22 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TP_0091 a5405520033b4f8958962ce97f30f109 520 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 3.8E-22 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TP_0091 a5405520033b4f8958962ce97f30f109 520 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 3.8E-22 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TP_0091 a5405520033b4f8958962ce97f30f109 520 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 209 227 3.8E-22 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TP_0091 a5405520033b4f8958962ce97f30f109 520 Gene3D G3DSA:3.40.50.620 1 341 6.5E-116 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0091 a5405520033b4f8958962ce97f30f109 520 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 519 5.8E-121 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TP_0091 a5405520033b4f8958962ce97f30f109 520 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 520 32.334 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TP_0091 a5405520033b4f8958962ce97f30f109 520 SUPERFAMILY SSF52374 3 348 2.68E-72 T 11-10-2018 TP_0091 a5405520033b4f8958962ce97f30f109 520 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 348 9.6E-81 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 TP_0091 a5405520033b4f8958962ce97f30f109 520 SMART SM00840 399 454 0.0035 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TP_0771 e9abfa0fbba7513e03432d614f0301d2 593 Pfam PF02690 Na+/Pi-cotransporter 56 195 6.3E-43 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TP_0771 e9abfa0fbba7513e03432d614f0301d2 593 Pfam PF02690 Na+/Pi-cotransporter 219 305 4.0E-11 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TP_0771 e9abfa0fbba7513e03432d614f0301d2 593 Pfam PF01895 PhoU domain 395 482 1.1E-4 T 11-10-2018 IPR026022 PhoU domain TP_0771 e9abfa0fbba7513e03432d614f0301d2 593 SUPERFAMILY SSF109755 389 590 4.71E-17 T 11-10-2018 TP_0771 e9abfa0fbba7513e03432d614f0301d2 593 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 44 363 1.6E-138 T 11-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 Gene3D G3DSA:3.40.30.60 358 501 4.8E-50 T 11-10-2018 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 Gene3D G3DSA:1.10.8.540 502 592 1.6E-30 T 11-10-2018 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 Gene3D G3DSA:1.10.490.80 594 693 2.5E-8 T 11-10-2018 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 Pfam PF00771 FHIPEP family 22 685 9.0E-231 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 134 150 1.4E-45 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 200 1.4E-45 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 234 248 1.4E-45 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 66 85 1.4E-45 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 171 1.4E-45 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 29 42 1.4E-45 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 11 693 3.3E-273 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 TP_0714 c272e513b7c1ace3fb78b8147bbd66dc 707 PIRSF PIRSF005419 1 699 2.0E-277 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TP_0570 19b80c3f796b20ab16d3b368e4118a0b 281 Gene3D G3DSA:3.10.310.50 165 277 2.7E-27 T 11-10-2018 TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 Pfam PF03717 Penicillin-binding Protein dimerisation domain 76 188 9.4E-15 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 SMART SM00740 594 652 4.7E-4 T 11-10-2018 IPR005543 PASTA domain TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 SUPERFAMILY SSF56519 71 210 8.63E-31 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 Gene3D G3DSA:3.90.1310.10 76 205 1.8E-17 T 11-10-2018 TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 Gene3D G3DSA:3.30.70.2110 94 167 1.8E-17 T 11-10-2018 TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 Gene3D G3DSA:3.40.710.10 284 484 1.4E-84 T 11-10-2018 TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 Pfam PF03793 PASTA domain 599 651 8.1E-7 T 11-10-2018 IPR005543 PASTA domain TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 Gene3D G3DSA:3.30.450.330 224 568 1.4E-84 T 11-10-2018 TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 Pfam PF00905 Penicillin binding protein transpeptidase domain 249 561 1.2E-52 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 SUPERFAMILY SSF54184 599 651 1.15E-9 T 11-10-2018 TP_0760 2ac671fcd1f77f2b44abd4ba628ff479 652 SUPERFAMILY SSF56601 223 572 5.83E-72 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:3.90.1100.10 617 684 1.1E-19 T 11-10-2018 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Pfam PF04560 RNA polymerase Rpb2, domain 7 1080 1154 1.7E-24 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 SUPERFAMILY SSF64484 18 1161 0.0 T 11-10-2018 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:2.40.270.10 922 1064 1.8E-49 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 ProSitePatterns PS01166 RNA polymerases beta chain signature. 931 943 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Pfam PF10385 RNA polymerase beta subunit external 1 domain 562 627 7.4E-17 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Pfam PF04563 RNA polymerase beta subunit 26 470 2.1E-23 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:3.90.1800.10 1066 1148 5.2E-10 T 11-10-2018 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:2.40.270.10 761 801 1.4E-5 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 905 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:3.90.1110.10 295 414 1.2E-26 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:3.90.1110.10 163 283 2.1E-22 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Pfam PF04565 RNA polymerase Rpb2, domain 3 484 552 7.0E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:2.40.50.150 802 921 5.1E-47 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 10 1156 12.023 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:2.40.50.100 685 760 9.0E-27 T 11-10-2018 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Pfam PF00562 RNA polymerase Rpb2, domain 6 689 1078 2.6E-155 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Pfam PF04561 RNA polymerase Rpb2, domain 2 315 425 1.2E-18 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Pfam PF04561 RNA polymerase Rpb2, domain 2 158 229 2.2E-5 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:3.90.1100.10 17 162 4.4E-43 T 11-10-2018 TP_0241 7878daa233465fa8f7e31e502b86196d 1178 Gene3D G3DSA:3.90.1100.10 415 594 1.0E-68 T 11-10-2018 TP_0898 007673570ceaacdbcf6e066eed3ddd25 1239 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 474 1.5E-51 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TP_0898 007673570ceaacdbcf6e066eed3ddd25 1239 Gene3D G3DSA:3.90.320.10 1050 1221 4.1E-13 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal TP_0898 007673570ceaacdbcf6e066eed3ddd25 1239 SUPERFAMILY SSF52980 1043 1218 8.04E-21 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TP_0898 007673570ceaacdbcf6e066eed3ddd25 1239 Pfam PF13361 UvrD-like helicase C-terminal domain 836 929 4.7E-9 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TP_0898 007673570ceaacdbcf6e066eed3ddd25 1239 SUPERFAMILY SSF52540 8 934 3.0E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0898 007673570ceaacdbcf6e066eed3ddd25 1239 Gene3D G3DSA:3.40.50.300 815 952 4.2E-17 T 11-10-2018 TP_0898 007673570ceaacdbcf6e066eed3ddd25 1239 Gene3D G3DSA:3.40.50.300 602 711 4.5E-13 T 11-10-2018 TP_0898 007673570ceaacdbcf6e066eed3ddd25 1239 Gene3D G3DSA:3.40.50.300 6 179 1.1E-29 T 11-10-2018 TP_0898 007673570ceaacdbcf6e066eed3ddd25 1239 Gene3D G3DSA:3.40.50.300 360 526 1.2E-26 T 11-10-2018 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1381 19.152 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Gene3D G3DSA:1.10.274.100 479 548 1.6E-19 T 11-10-2018 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 1.8E-91 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Gene3D G3DSA:1.10.132.30 616 757 2.4E-61 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Gene3D G3DSA:1.10.40.90 363 405 1.1E-17 T 11-10-2018 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1371 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 622 1.8E-21 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 SMART SM00663 224 503 5.6E-171 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Gene3D G3DSA:2.40.50.100 1039 1131 4.0E-21 T 11-10-2018 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Gene3D G3DSA:2.40.50.100 1156 1219 2.9E-60 T 11-10-2018 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 384 2.4E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Pfam PF00623 RNA polymerase Rpb1, domain 2 383 474 1.6E-26 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Gene3D G3DSA:1.10.1790.20 1140 1318 2.9E-60 T 11-10-2018 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 SUPERFAMILY SSF64484 6 1372 0.0 T 11-10-2018 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Pfam PF05000 RNA polymerase Rpb1, domain 4 651 723 6.2E-16 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Gene3D G3DSA:1.10.150.390 1320 1382 5.8E-27 T 11-10-2018 TP_0242 c3228e86b291d3eec1da90bf9612eb9c 1416 Pfam PF04998 RNA polymerase Rpb1, domain 5 733 1319 8.9E-78 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TP_0919 1a6479122ae28dce3017d388c05ce247 105 SUPERFAMILY SSF52833 4 104 1.13E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TP_0919 1a6479122ae28dce3017d388c05ce247 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 104 1.3E-37 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TP_0919 1a6479122ae28dce3017d388c05ce247 105 Gene3D G3DSA:3.40.30.10 6 105 8.8E-31 T 11-10-2018 TP_0919 1a6479122ae28dce3017d388c05ce247 105 PIRSF PIRSF000077 1 105 4.6E-33 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TP_0919 1a6479122ae28dce3017d388c05ce247 105 Pfam PF00085 Thioredoxin 12 103 7.8E-26 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 TP_0919 1a6479122ae28dce3017d388c05ce247 105 PRINTS PR00421 Thioredoxin family signature 69 80 9.5E-9 T 11-10-2018 TP_0919 1a6479122ae28dce3017d388c05ce247 105 PRINTS PR00421 Thioredoxin family signature 29 38 9.5E-9 T 11-10-2018 TP_0919 1a6479122ae28dce3017d388c05ce247 105 PRINTS PR00421 Thioredoxin family signature 21 29 9.5E-9 T 11-10-2018 TP_0919 1a6479122ae28dce3017d388c05ce247 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 SMART SM00382 173 311 7.6E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 ProSitePatterns PS00674 AAA-protein family signature. 279 297 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 Gene3D G3DSA:1.20.58.760 385 585 1.4E-66 T 11-10-2018 TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 SUPERFAMILY SSF140990 390 578 9.94E-63 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 177 308 3.5E-44 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 579 35.011 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 86 578 4.0E-226 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 Gene3D G3DSA:3.40.50.300 127 310 9.7E-65 T 11-10-2018 TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 SUPERFAMILY SSF52540 139 403 1.24E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 Pfam PF01434 Peptidase family M41 371 577 1.3E-76 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TP_0765 b35f060b24690e07f3b7ccd7f5d6bc1c 609 Gene3D G3DSA:1.10.8.60 311 384 3.1E-27 T 11-10-2018 TP_0640 51eca589fcfe6d844dfc2eb69edae691 614 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 548 6.0E-16 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TP_0640 51eca589fcfe6d844dfc2eb69edae691 614 SUPERFAMILY SSF58104 254 578 3.01E-31 T 11-10-2018 TP_0640 51eca589fcfe6d844dfc2eb69edae691 614 SMART SM00283 324 571 8.5E-26 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TP_0640 51eca589fcfe6d844dfc2eb69edae691 614 Gene3D G3DSA:1.10.287.950 292 612 3.0E-33 T 11-10-2018 TP_0640 51eca589fcfe6d844dfc2eb69edae691 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 345 374 2.1E-14 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TP_0640 51eca589fcfe6d844dfc2eb69edae691 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 449 2.1E-14 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TP_0640 51eca589fcfe6d844dfc2eb69edae691 614 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 451 480 2.1E-14 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TP_0815 9258ee5b145afcf5139f3c8b41538ae0 327 Pfam PF08445 FR47-like protein 262 319 4.4E-11 T 11-10-2018 IPR013653 FR47-like GO:0016747 TP_0815 9258ee5b145afcf5139f3c8b41538ae0 327 Gene3D G3DSA:3.40.630.30 113 325 5.5E-19 T 11-10-2018 TP_0815 9258ee5b145afcf5139f3c8b41538ae0 327 SUPERFAMILY SSF55729 188 323 3.19E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TP_0655 38c42a0cb04101570e38292828e17d67 348 PIRSF PIRSF019574 1 348 1.8E-87 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TP_0655 38c42a0cb04101570e38292828e17d67 348 Gene3D G3DSA:3.40.190.10 33 313 1.1E-118 T 11-10-2018 TP_0655 38c42a0cb04101570e38292828e17d67 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 207 226 3.9E-40 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TP_0655 38c42a0cb04101570e38292828e17d67 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 3.9E-40 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TP_0655 38c42a0cb04101570e38292828e17d67 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 3.9E-40 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TP_0655 38c42a0cb04101570e38292828e17d67 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 169 188 3.9E-40 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TP_0655 38c42a0cb04101570e38292828e17d67 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 3.9E-40 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TP_0655 38c42a0cb04101570e38292828e17d67 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 3.9E-40 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TP_0655 38c42a0cb04101570e38292828e17d67 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 3.9E-40 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TP_0655 38c42a0cb04101570e38292828e17d67 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 254 273 3.9E-40 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TP_0655 38c42a0cb04101570e38292828e17d67 348 SUPERFAMILY SSF53850 30 343 9.39E-61 T 11-10-2018 TP_0655 38c42a0cb04101570e38292828e17d67 348 Gene3D G3DSA:3.40.190.10 136 342 1.1E-118 T 11-10-2018 TP_0655 38c42a0cb04101570e38292828e17d67 348 Pfam PF13416 Bacterial extracellular solute-binding protein 45 305 5.5E-22 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein TP_0264 50273afbc0f70324d5b4b7fc47c8bee6 218 SMART SM01133 2 215 4.9E-80 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TP_0264 50273afbc0f70324d5b4b7fc47c8bee6 218 SUPERFAMILY SSF51569 1 215 2.09E-72 T 11-10-2018 TP_0264 50273afbc0f70324d5b4b7fc47c8bee6 218 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 217 32.859 T 11-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 TP_0264 50273afbc0f70324d5b4b7fc47c8bee6 218 Gene3D G3DSA:3.20.20.70 1 218 6.8E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0264 50273afbc0f70324d5b4b7fc47c8bee6 218 Pfam PF01791 DeoC/LacD family aldolase 7 198 3.8E-13 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TP_0264 50273afbc0f70324d5b4b7fc47c8bee6 218 PIRSF PIRSF001357 1 218 1.1E-70 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TP_0264 50273afbc0f70324d5b4b7fc47c8bee6 218 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 2 213 1.6E-67 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TP_0844 31aff6032f630c75f38c1e83120ee554 350 PIRSF PIRSF000149 1 350 7.2E-120 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 Gene3D G3DSA:3.30.360.10 163 333 8.0E-141 T 11-10-2018 TP_0844 31aff6032f630c75f38c1e83120ee554 350 SMART SM00846 1 162 1.1E-64 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 160 167 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 Gene3D G3DSA:3.40.50.720 2 345 8.0E-141 T 11-10-2018 TP_0844 31aff6032f630c75f38c1e83120ee554 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 114 127 8.2E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 281 296 8.2E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 184 200 8.2E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 241 258 8.2E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 156 174 8.2E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 SUPERFAMILY SSF55347 161 329 2.98E-69 T 11-10-2018 TP_0844 31aff6032f630c75f38c1e83120ee554 350 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 108 6.3E-29 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 2 341 4.7E-124 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 329 5.5E-63 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0844 31aff6032f630c75f38c1e83120ee554 350 SUPERFAMILY SSF51735 1 174 1.11E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0821 d3c08b0ee9ec4aae4fae2310dd85ffd0 268 Gene3D G3DSA:3.40.190.10 112 217 3.3E-84 T 11-10-2018 TP_0821 d3c08b0ee9ec4aae4fae2310dd85ffd0 268 Gene3D G3DSA:3.40.190.10 34 261 3.3E-84 T 11-10-2018 TP_0821 d3c08b0ee9ec4aae4fae2310dd85ffd0 268 SUPERFAMILY SSF53850 31 264 1.45E-66 T 11-10-2018 TP_0821 d3c08b0ee9ec4aae4fae2310dd85ffd0 268 PIRSF PIRSF002854 1 268 1.1E-101 T 11-10-2018 IPR004872 Lipoprotein NlpA family TP_0821 d3c08b0ee9ec4aae4fae2310dd85ffd0 268 Pfam PF03180 NLPA lipoprotein 33 264 3.7E-85 T 11-10-2018 IPR004872 Lipoprotein NlpA family TP_0121 82a099a12b4bbec4b1620bebe606b1be 355 SUPERFAMILY SSF102114 94 327 2.22E-25 T 11-10-2018 TP_0121 82a099a12b4bbec4b1620bebe606b1be 355 Gene3D G3DSA:3.20.20.70 36 322 3.0E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0121 82a099a12b4bbec4b1620bebe606b1be 355 Pfam PF13353 4Fe-4S single cluster domain 101 184 1.6E-7 T 11-10-2018 TP_0121 82a099a12b4bbec4b1620bebe606b1be 355 TIGRFAM TIGR00238 TIGR00238: KamA family protein 35 316 1.2E-59 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase TP_0121 82a099a12b4bbec4b1620bebe606b1be 355 PIRSF PIRSF004911 1 355 1.0E-111 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase TP_0744 6bdfe0a693197c12095b0821cb9c7f2d 108 SUPERFAMILY SSF118010 7 102 6.67E-18 T 11-10-2018 IPR036764 Cysteine protease Prp superfamily TP_0744 6bdfe0a693197c12095b0821cb9c7f2d 108 Pfam PF04327 Cysteine protease Prp 8 97 3.4E-12 T 11-10-2018 IPR007422 Cysteine protease Prp TP_0744 6bdfe0a693197c12095b0821cb9c7f2d 108 Gene3D G3DSA:3.30.70.1490 4 102 4.6E-13 T 11-10-2018 IPR036764 Cysteine protease Prp superfamily TP_0600 9929bd9624beb07d01782290a1e58ef1 450 Pfam PF13180 PDZ domain 222 286 2.2E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0600 9929bd9624beb07d01782290a1e58ef1 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 449 1.7E-76 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 TP_0600 9929bd9624beb07d01782290a1e58ef1 450 SMART SM00228 98 194 0.26 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0600 9929bd9624beb07d01782290a1e58ef1 450 SMART SM00228 195 278 1.2E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0600 9929bd9624beb07d01782290a1e58ef1 450 SUPERFAMILY SSF50156 198 297 7.23E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TP_0600 9929bd9624beb07d01782290a1e58ef1 450 SUPERFAMILY SSF50156 102 203 5.65E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TP_0600 9929bd9624beb07d01782290a1e58ef1 450 Gene3D G3DSA:2.30.42.10 219 301 1.1E-12 T 11-10-2018 TP_0600 9929bd9624beb07d01782290a1e58ef1 450 Gene3D G3DSA:2.30.42.10 139 218 2.1E-16 T 11-10-2018 TP_0600 9929bd9624beb07d01782290a1e58ef1 450 Pfam PF02163 Peptidase family M50 8 435 1.9E-58 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 TP_0740 bad09fc2149fa20574277e9b39e97a45 188 SUPERFAMILY SSF109604 9 136 1.36E-16 T 11-10-2018 TP_0740 bad09fc2149fa20574277e9b39e97a45 188 Gene3D G3DSA:1.10.3210.10 1 183 6.7E-31 T 11-10-2018 TP_0740 bad09fc2149fa20574277e9b39e97a45 188 Pfam PF01966 HD domain 13 129 7.5E-9 T 11-10-2018 IPR006674 HD domain TP_0740 bad09fc2149fa20574277e9b39e97a45 188 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 7 134 1.5E-22 T 11-10-2018 IPR005249 Conserved hypothetical protein CHP00488 TP_0740 bad09fc2149fa20574277e9b39e97a45 188 SMART SM00471 9 140 9.6E-6 T 11-10-2018 IPR003607 HD/PDEase domain TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 45.677 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 1.0E-51 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 SUPERFAMILY SSF50249 2 124 2.09E-44 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 PIRSF PIRSF002158 15 273 8.9E-93 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 SMART SM01382 124 251 5.5E-79 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 Gene3D G3DSA:2.30.30.30 115 195 3.1E-28 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.3E-30 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.6E-127 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 SMART SM01383 42 118 5.8E-43 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 SUPERFAMILY SSF50104 128 269 1.75E-56 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 Gene3D G3DSA:2.40.50.140 1 114 9.5E-41 T 11-10-2018 TP_0192 c9657f2af3875fd3f8cb194483fca19c 273 Gene3D G3DSA:4.10.950.10 196 273 1.8E-33 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0035 72dc0cda3d2b532b5c40b50e066410ac 238 Pfam PF00005 ABC transporter 27 156 1.7E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0035 72dc0cda3d2b532b5c40b50e066410ac 238 Gene3D G3DSA:3.40.50.300 5 235 1.6E-48 T 11-10-2018 TP_0035 72dc0cda3d2b532b5c40b50e066410ac 238 SMART SM00382 36 207 2.6E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0035 72dc0cda3d2b532b5c40b50e066410ac 238 SUPERFAMILY SSF52540 11 213 4.16E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0568 94c8d546158fb0c0b181c121007366dc 210 Pfam PF01081 KDPG and KHG aldolase 6 199 3.4E-70 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TP_0568 94c8d546158fb0c0b181c121007366dc 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TP_0568 94c8d546158fb0c0b181c121007366dc 210 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TP_0568 94c8d546158fb0c0b181c121007366dc 210 SUPERFAMILY SSF51569 3 206 9.71E-66 T 11-10-2018 TP_0568 94c8d546158fb0c0b181c121007366dc 210 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 6.9E-87 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TP_0568 94c8d546158fb0c0b181c121007366dc 210 Gene3D G3DSA:3.20.20.70 2 209 7.2E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0081 1b471ba8f0093f7e94fcf7343926fbb4 282 Gene3D G3DSA:3.30.465.10 12 178 4.0E-27 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TP_0081 1b471ba8f0093f7e94fcf7343926fbb4 282 SUPERFAMILY SSF56176 11 177 4.91E-29 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TP_0081 1b471ba8f0093f7e94fcf7343926fbb4 282 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 12 177 3.4E-35 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 812 23.329 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Gene3D G3DSA:1.10.268.10 374 462 5.3E-193 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Gene3D G3DSA:2.120.10.90 501 810 3.0E-105 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 468 1.5E-146 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 SUPERFAMILY SSF56719 34 492 7.46E-159 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Gene3D G3DSA:3.30.1360.40 240 337 5.3E-193 T 11-10-2018 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 510 554 1.7E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 714 760 1.3E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 810 3.5E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 559 606 2.3E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 663 710 9.8E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 616 659 7.3E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 SUPERFAMILY SSF101904 504 810 3.01E-93 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 Gene3D G3DSA:3.90.199.10 36 491 5.3E-193 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 811 0.0 T 11-10-2018 TP_0005 a3b775c4289ec1d9c62b46b62e060e80 813 SMART SM00434 15 469 2.4E-271 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 Gene3D G3DSA:1.25.40.10 293 389 1.6E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 SUPERFAMILY SSF48452 280 470 6.64E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 SMART SM00028 434 467 0.28 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 SMART SM00028 292 325 47.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 SMART SM00028 360 393 0.097 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 SMART SM00028 400 433 33.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 SMART SM00028 326 359 0.011 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 SMART SM00028 171 204 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 Gene3D G3DSA:1.25.40.10 390 482 7.6E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 Pfam PF13432 Tetratricopeptide repeat 341 393 2.5E-6 T 11-10-2018 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 Pfam PF13432 Tetratricopeptide repeat 406 467 0.0011 T 11-10-2018 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 SUPERFAMILY SSF48452 178 315 1.14E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0469 f03fc2404c742c91ccf85aac7a4fe5ff 487 Gene3D G3DSA:1.25.40.10 164 292 1.9E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0211 44c096424933ba100d1fa6545ec1ba55 126 PIRSF PIRSF002131 2 126 2.6E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TP_0211 44c096424933ba100d1fa6545ec1ba55 126 SUPERFAMILY SSF53137 11 126 2.01E-45 T 11-10-2018 TP_0211 44c096424933ba100d1fa6545ec1ba55 126 Gene3D G3DSA:3.30.420.80 1 126 3.9E-51 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 TP_0211 44c096424933ba100d1fa6545ec1ba55 126 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 7 122 3.4E-55 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0211 44c096424933ba100d1fa6545ec1ba55 126 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 126 31.594 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TP_0211 44c096424933ba100d1fa6545ec1ba55 126 Pfam PF00411 Ribosomal protein S11 16 125 3.1E-43 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TP_0764 b30bb53934c00b5d96211b7436623653 391 Gene3D G3DSA:1.10.3210.10 6 314 2.4E-36 T 11-10-2018 TP_0764 b30bb53934c00b5d96211b7436623653 391 SMART SM00471 152 287 1.3E-6 T 11-10-2018 IPR003607 HD/PDEase domain TP_0764 b30bb53934c00b5d96211b7436623653 391 SUPERFAMILY SSF109604 150 311 1.05E-12 T 11-10-2018 TP_0764 b30bb53934c00b5d96211b7436623653 391 Pfam PF01966 HD domain 157 277 1.9E-9 T 11-10-2018 IPR006674 HD domain TP_0801 4f889affddb3305c734cf24e766a75b1 809 Gene3D G3DSA:3.40.50.300 196 391 4.4E-64 T 11-10-2018 TP_0801 4f889affddb3305c734cf24e766a75b1 809 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 253 365 4.4E-11 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0801 4f889affddb3305c734cf24e766a75b1 809 Pfam PF07724 AAA domain (Cdc48 subfamily) 531 692 3.0E-44 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0801 4f889affddb3305c734cf24e766a75b1 809 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 343 355 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TP_0801 4f889affddb3305c734cf24e766a75b1 809 Gene3D G3DSA:1.10.1780.10 4 140 9.6E-23 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TP_0801 4f889affddb3305c734cf24e766a75b1 809 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 640 654 3.4E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0801 4f889affddb3305c734cf24e766a75b1 809 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 607 625 3.4E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0801 4f889affddb3305c734cf24e766a75b1 809 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 3.4E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0801 4f889affddb3305c734cf24e766a75b1 809 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 578 596 3.4E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TP_0801 4f889affddb3305c734cf24e766a75b1 809 SUPERFAMILY SSF52540 482 773 3.38E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0801 4f889affddb3305c734cf24e766a75b1 809 Gene3D G3DSA:1.10.8.60 393 483 1.9E-29 T 11-10-2018 TP_0801 4f889affddb3305c734cf24e766a75b1 809 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 6 780 6.5E-304 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 TP_0801 4f889affddb3305c734cf24e766a75b1 809 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 563 581 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 TP_0801 4f889affddb3305c734cf24e766a75b1 809 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 699 778 2.7E-15 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TP_0801 4f889affddb3305c734cf24e766a75b1 809 SMART SM00382 248 391 2.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0801 4f889affddb3305c734cf24e766a75b1 809 SMART SM00382 532 700 4.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0801 4f889affddb3305c734cf24e766a75b1 809 SUPERFAMILY SSF81923 5 138 1.2E-26 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TP_0801 4f889affddb3305c734cf24e766a75b1 809 Gene3D G3DSA:1.10.8.60 699 792 5.2E-17 T 11-10-2018 TP_0801 4f889affddb3305c734cf24e766a75b1 809 SMART SM01086 699 788 2.4E-20 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TP_0801 4f889affddb3305c734cf24e766a75b1 809 Gene3D G3DSA:3.40.50.300 485 698 3.3E-73 T 11-10-2018 TP_0801 4f889affddb3305c734cf24e766a75b1 809 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 65 2.7E-7 T 11-10-2018 IPR004176 Clp, N-terminal TP_0801 4f889affddb3305c734cf24e766a75b1 809 SUPERFAMILY SSF52540 209 453 1.22E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0852 ad274e0ccead061245f008b4b4b9dd12 332 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 317 1.9E-62 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TP_0852 ad274e0ccead061245f008b4b4b9dd12 332 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 9 322 17.868 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TP_0852 ad274e0ccead061245f008b4b4b9dd12 332 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 158 170 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TP_0852 ad274e0ccead061245f008b4b4b9dd12 332 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 21 315 3.5E-56 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SUPERFAMILY SSF48452 212 372 1.06E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 Pfam PF13432 Tetratricopeptide repeat 147 202 0.018 T 11-10-2018 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 Pfam PF13176 Tetratricopeptide repeat 282 311 0.0016 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 Gene3D G3DSA:1.25.40.10 210 310 2.8E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 141 174 0.15 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 39 72 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 245 278 3.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 107 140 0.12 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 175 208 0.29 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 73 106 0.24 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 279 312 2.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 313 345 46.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 346 379 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SMART SM00028 211 244 7.2E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 SUPERFAMILY SSF48452 44 206 7.83E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 Gene3D G3DSA:1.25.40.10 140 209 1.1E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 Pfam PF13181 Tetratricopeptide repeat 212 243 0.042 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 Gene3D G3DSA:1.25.40.10 311 391 1.2E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 Pfam PF14559 Tetratricopeptide repeat 85 139 5.3E-8 T 11-10-2018 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 Pfam PF14559 Tetratricopeptide repeat 325 371 7.9E-8 T 11-10-2018 TP_0067 d7d4ac2fd99a2721590af5651ec9ddec 393 Gene3D G3DSA:1.25.40.10 31 139 1.4E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0581 3badabf23517f73fbb87ba7db0eed23b 226 SMART SM00382 34 222 9.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0581 3badabf23517f73fbb87ba7db0eed23b 226 Gene3D G3DSA:3.40.50.300 3 226 1.5E-58 T 11-10-2018 TP_0581 3badabf23517f73fbb87ba7db0eed23b 226 SUPERFAMILY SSF52540 5 224 5.2E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0581 3badabf23517f73fbb87ba7db0eed23b 226 Pfam PF00005 ABC transporter 25 173 4.8E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0056 1a94f354534594db18e52a06d9507a40 593 Pfam PF00682 HMGL-like 5 270 3.3E-52 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TP_0056 1a94f354534594db18e52a06d9507a40 593 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 589 1.3E-283 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 TP_0056 1a94f354534594db18e52a06d9507a40 593 Gene3D G3DSA:2.40.50.100 525 593 7.3E-20 T 11-10-2018 TP_0056 1a94f354534594db18e52a06d9507a40 593 Gene3D G3DSA:3.20.20.70 1 452 7.4E-159 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0056 1a94f354534594db18e52a06d9507a40 593 SUPERFAMILY SSF51230 522 592 1.12E-15 T 11-10-2018 IPR011053 Single hybrid motif TP_0056 1a94f354534594db18e52a06d9507a40 593 Pfam PF00364 Biotin-requiring enzyme 528 592 1.5E-13 T 11-10-2018 IPR000089 Biotin/lipoyl attachment TP_0056 1a94f354534594db18e52a06d9507a40 593 Pfam PF02436 Conserved carboxylase domain 292 458 1.8E-48 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 TP_0056 1a94f354534594db18e52a06d9507a40 593 SUPERFAMILY SSF51569 2 299 3.85E-90 T 11-10-2018 TP_0056 1a94f354534594db18e52a06d9507a40 593 SUPERFAMILY SSF89000 297 453 4.71E-45 T 11-10-2018 TP_0303 94447512e8ad38e1f0eb10768db53116 648 Pfam PF08676 MutL C terminal dimerisation domain 472 605 4.6E-31 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TP_0303 94447512e8ad38e1f0eb10768db53116 648 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 36 353 2.2E-97 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 TP_0303 94447512e8ad38e1f0eb10768db53116 648 SMART SM00853 473 606 4.8E-32 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TP_0303 94447512e8ad38e1f0eb10768db53116 648 Gene3D G3DSA:3.30.565.10 35 259 1.0E-55 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TP_0303 94447512e8ad38e1f0eb10768db53116 648 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 35 645 22.248 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 TP_0303 94447512e8ad38e1f0eb10768db53116 648 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 127 133 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site TP_0303 94447512e8ad38e1f0eb10768db53116 648 SUPERFAMILY SSF54211 238 373 4.55E-21 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0303 94447512e8ad38e1f0eb10768db53116 648 Gene3D G3DSA:3.30.230.10 266 371 1.4E-18 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_0303 94447512e8ad38e1f0eb10768db53116 648 Gene3D G3DSA:2.30.42.20 474 647 2.1E-37 T 11-10-2018 TP_0303 94447512e8ad38e1f0eb10768db53116 648 SUPERFAMILY SSF118116 471 647 5.75E-30 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily TP_0303 94447512e8ad38e1f0eb10768db53116 648 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 58 150 4.2E-10 T 11-10-2018 TP_0303 94447512e8ad38e1f0eb10768db53116 648 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 270 372 1.1E-21 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TP_0303 94447512e8ad38e1f0eb10768db53116 648 SUPERFAMILY SSF55874 35 254 5.11E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TP_0303 94447512e8ad38e1f0eb10768db53116 648 Gene3D G3DSA:3.30.1370.100 513 603 2.1E-37 T 11-10-2018 TP_0303 94447512e8ad38e1f0eb10768db53116 648 SMART SM01340 257 373 4.7E-21 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TP_0306 208af61c1df6800a9dfdb8273de96217 204 Gene3D G3DSA:1.10.1050.10 8 204 3.6E-65 T 11-10-2018 TP_0306 208af61c1df6800a9dfdb8273de96217 204 SMART SM00363 95 159 7.3E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0306 208af61c1df6800a9dfdb8273de96217 204 SUPERFAMILY SSF55174 6 204 1.01E-50 T 11-10-2018 TP_0306 208af61c1df6800a9dfdb8273de96217 204 Gene3D G3DSA:3.10.290.10 94 189 3.6E-65 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TP_0306 208af61c1df6800a9dfdb8273de96217 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 204 9.5E-61 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TP_0306 208af61c1df6800a9dfdb8273de96217 204 Pfam PF01479 S4 domain 95 142 5.7E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0306 208af61c1df6800a9dfdb8273de96217 204 SMART SM01390 5 94 1.1E-29 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TP_0306 208af61c1df6800a9dfdb8273de96217 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 3 204 29.492 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TP_0306 208af61c1df6800a9dfdb8273de96217 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 4 94 4.9E-23 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TP_0306 208af61c1df6800a9dfdb8273de96217 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 93 117 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 SUPERFAMILY SSF46911 26 97 3.01E-27 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 TIGRFAM TIGR00165 S18: ribosomal protein bS18 31 96 4.1E-32 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 28 98 21.505 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 47 96 2.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 Gene3D G3DSA:4.10.640.10 16 98 8.2E-30 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 Pfam PF01084 Ribosomal protein S18 46 93 2.8E-25 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 PRINTS PR00974 Ribosomal protein S18 family signature 71 85 4.4E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 PRINTS PR00974 Ribosomal protein S18 family signature 63 70 4.4E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 PRINTS PR00974 Ribosomal protein S18 family signature 85 95 4.4E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0061 c7e69405a1b16bb5cc0038e9b09693ac 99 PRINTS PR00974 Ribosomal protein S18 family signature 53 63 4.4E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0240 7651b428c8561f413ad9bec4205c4b67 129 Gene3D G3DSA:3.30.1390.10 56 129 2.2E-27 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TP_0240 7651b428c8561f413ad9bec4205c4b67 129 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 128 3.0E-49 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0240 7651b428c8561f413ad9bec4205c4b67 129 Gene3D G3DSA:1.20.5.710 4 55 7.6E-17 T 11-10-2018 TP_0240 7651b428c8561f413ad9bec4205c4b67 129 SUPERFAMILY SSF48300 5 62 1.7E-13 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0240 7651b428c8561f413ad9bec4205c4b67 129 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 129 23.733 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0240 7651b428c8561f413ad9bec4205c4b67 129 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 128 2.3E-24 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0240 7651b428c8561f413ad9bec4205c4b67 129 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 50 1.1E-16 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0240 7651b428c8561f413ad9bec4205c4b67 129 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 128 5.0E-29 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0240 7651b428c8561f413ad9bec4205c4b67 129 SUPERFAMILY SSF54736 55 128 5.93E-20 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TP_0644 960848da7c1795485fbb1700f2c059bf 528 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 8 528 34.679 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TP_0644 960848da7c1795485fbb1700f2c059bf 528 Gene3D G3DSA:1.10.10.860 278 325 6.1E-23 T 11-10-2018 TP_0644 960848da7c1795485fbb1700f2c059bf 528 Pfam PF01921 tRNA synthetases class I (K) 9 369 2.3E-132 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TP_0644 960848da7c1795485fbb1700f2c059bf 528 Gene3D G3DSA:1.10.10.770 326 435 6.4E-26 T 11-10-2018 TP_0644 960848da7c1795485fbb1700f2c059bf 528 SUPERFAMILY SSF52374 9 326 4.02E-61 T 11-10-2018 TP_0644 960848da7c1795485fbb1700f2c059bf 528 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 45 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0644 960848da7c1795485fbb1700f2c059bf 528 Gene3D G3DSA:2.30.30.300 176 219 6.2E-93 T 11-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 TP_0644 960848da7c1795485fbb1700f2c059bf 528 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 8 528 3.4E-168 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TP_0644 960848da7c1795485fbb1700f2c059bf 528 Gene3D G3DSA:1.10.10.350 436 527 1.9E-17 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TP_0644 960848da7c1795485fbb1700f2c059bf 528 Gene3D G3DSA:3.40.50.620 10 277 6.2E-93 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0644 960848da7c1795485fbb1700f2c059bf 528 SUPERFAMILY SSF48163 330 526 1.7E-34 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 SMART SM01005 226 356 2.1E-57 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 10 20 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 Pfam PF01168 Alanine racemase, N-terminal domain 5 212 7.3E-61 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 Pfam PF00842 Alanine racemase, C-terminal domain 226 355 3.7E-41 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 TIGRFAM TIGR00492 alr: alanine racemase 6 356 2.6E-93 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 Gene3D G3DSA:2.40.37.10 214 357 3.0E-48 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 SUPERFAMILY SSF51419 6 227 2.62E-59 T 11-10-2018 IPR029066 PLP-binding barrel TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 PRINTS PR00992 Alanine racemase signature 41 59 1.3E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 PRINTS PR00992 Alanine racemase signature 185 212 1.3E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 PRINTS PR00992 Alanine racemase signature 242 257 1.3E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 PRINTS PR00992 Alanine racemase signature 280 297 1.3E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 PRINTS PR00992 Alanine racemase signature 5 21 1.3E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 PRINTS PR00992 Alanine racemase signature 139 150 1.3E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 PRINTS PR00992 Alanine racemase signature 338 351 1.3E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 PRINTS PR00992 Alanine racemase signature 259 274 1.3E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 PRINTS PR00992 Alanine racemase signature 105 117 1.3E-58 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 Gene3D G3DSA:3.20.20.10 1 213 2.0E-66 T 11-10-2018 IPR029066 PLP-binding barrel TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 SUPERFAMILY SSF50621 224 356 3.17E-42 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TP_0681 1379fb1ba5e5c196d2c9fe2a17df23d3 357 Hamap MF_01201 Alanine racemase. 1 356 28.259 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TP_0775 30c6123753558232f5e63abc9f650e39 211 SUPERFAMILY SSF48150 9 207 3.77E-63 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TP_0775 30c6123753558232f5e63abc9f650e39 211 Gene3D G3DSA:1.10.1670.10 14 206 4.6E-68 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TP_0775 30c6123753558232f5e63abc9f650e39 211 ProSitePatterns PS01155 Endonuclease III family signature. 105 134 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 TP_0775 30c6123753558232f5e63abc9f650e39 211 SMART SM00525 189 209 0.001 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 TP_0775 30c6123753558232f5e63abc9f650e39 211 PIRSF PIRSF001435 5 210 2.0E-45 T 11-10-2018 TP_0775 30c6123753558232f5e63abc9f650e39 211 Hamap MF_00942 Endonuclease III [nth]. 3 211 34.369 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TP_0775 30c6123753558232f5e63abc9f650e39 211 Gene3D G3DSA:1.10.340.30 24 135 4.6E-68 T 11-10-2018 TP_0775 30c6123753558232f5e63abc9f650e39 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 167 1.9E-18 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TP_0775 30c6123753558232f5e63abc9f650e39 211 SMART SM00478 41 188 3.1E-54 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TP_0775 30c6123753558232f5e63abc9f650e39 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 TP_0775 30c6123753558232f5e63abc9f650e39 211 TIGRFAM TIGR01083 nth: endonuclease III 8 197 3.8E-83 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Gene3D G3DSA:3.30.65.10 584 630 5.3E-12 T 11-10-2018 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 SMART SM00493 17 117 3.0E-26 T 11-10-2018 IPR006171 TOPRIM domain TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Pfam PF01131 DNA topoisomerase 143 558 1.7E-123 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 SUPERFAMILY SSF57783 587 624 4.25E-12 T 11-10-2018 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 SMART SM00436 119 207 3.2E-52 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Gene3D G3DSA:2.70.20.10 199 468 2.4E-145 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 SMART SM00437 257 521 6.9E-123 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 307 316 9.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 383 399 9.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 91 104 9.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 177 195 9.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 484 498 9.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Gene3D G3DSA:1.10.290.10 265 398 2.4E-145 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Gene3D G3DSA:3.40.50.140 13 149 4.1E-47 T 11-10-2018 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 SUPERFAMILY SSF56712 17 600 6.02E-174 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Hamap MF_00952 DNA topoisomerase 1 [topA]. 17 652 53.27 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 294 316 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Pfam PF01751 Toprim domain 19 128 6.3E-26 T 11-10-2018 IPR006171 TOPRIM domain TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 19 623 1.8E-262 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Gene3D G3DSA:1.10.460.10 150 561 2.4E-145 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 631 665 2.0E-7 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 670 705 4.7E-5 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TP_0394 23b4f7b622d6976374d9c83f7add08b1 731 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 589 624 3.9E-11 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TP_0969 f06fd27fc2c27da45cf300d7a8951935 539 SUPERFAMILY SSF56954 448 515 8.37E-5 T 11-10-2018 TP_0609 5739df77dd85a1a43f65372ab0296080 523 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 8 523 43.391 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 TP_0609 5739df77dd85a1a43f65372ab0296080 523 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 492 7.9E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0609 5739df77dd85a1a43f65372ab0296080 523 PRINTS PR01042 Aspartyl-tRNA synthetase signature 239 251 7.9E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0609 5739df77dd85a1a43f65372ab0296080 523 PRINTS PR01042 Aspartyl-tRNA synthetase signature 255 268 7.9E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0609 5739df77dd85a1a43f65372ab0296080 523 PRINTS PR01042 Aspartyl-tRNA synthetase signature 438 454 7.9E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0609 5739df77dd85a1a43f65372ab0296080 523 SUPERFAMILY SSF50249 16 128 2.18E-8 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0609 5739df77dd85a1a43f65372ab0296080 523 SUPERFAMILY SSF55681 120 521 3.11E-94 T 11-10-2018 TP_0609 5739df77dd85a1a43f65372ab0296080 523 Gene3D G3DSA:2.40.50.140 7 131 5.9E-11 T 11-10-2018 TP_0609 5739df77dd85a1a43f65372ab0296080 523 Pfam PF01336 OB-fold nucleic acid binding domain 23 124 4.5E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TP_0609 5739df77dd85a1a43f65372ab0296080 523 Pfam PF00152 tRNA synthetases class II (D, K and N) 142 517 9.2E-77 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0541 d540563cff8bdc51ee59116c78ae27bb 319 Gene3D G3DSA:3.40.50.300 9 207 5.7E-38 T 11-10-2018 TP_0541 d540563cff8bdc51ee59116c78ae27bb 319 Pfam PF01926 50S ribosome-binding GTPase 14 128 6.7E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0541 d540563cff8bdc51ee59116c78ae27bb 319 Pfam PF07650 KH domain 248 308 3.9E-9 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0541 d540563cff8bdc51ee59116c78ae27bb 319 SUPERFAMILY SSF54814 203 317 6.28E-26 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TP_0541 d540563cff8bdc51ee59116c78ae27bb 319 Gene3D G3DSA:3.30.300.20 208 319 8.1E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TP_0541 d540563cff8bdc51ee59116c78ae27bb 319 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 143 9.2E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TP_0541 d540563cff8bdc51ee59116c78ae27bb 319 Hamap MF_00367 GTPase Era [era]. 8 319 29.228 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0541 d540563cff8bdc51ee59116c78ae27bb 319 TIGRFAM TIGR00436 era: GTP-binding protein Era 15 302 1.7E-57 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0541 d540563cff8bdc51ee59116c78ae27bb 319 SUPERFAMILY SSF52540 15 234 9.0E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Pfam PF00270 DEAD/DEAH box helicase 601 760 1.1E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Gene3D G3DSA:2.30.30.840 479 537 3.1E-228 T 11-10-2018 TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SUPERFAMILY SSF52540 376 459 3.63E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Gene3D G3DSA:3.30.2060.10 138 227 3.3E-40 T 11-10-2018 TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SUPERFAMILY SSF52540 521 779 7.91E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Gene3D G3DSA:3.40.50.300 475 985 3.1E-228 T 11-10-2018 TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SUPERFAMILY SSF143517 986 1138 6.67E-30 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SMART SM00982 999 1099 1.1E-30 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Gene3D G3DSA:3.90.1150.50 995 1140 5.0E-31 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SUPERFAMILY SSF141259 469 544 2.48E-19 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SUPERFAMILY SSF52540 12 362 3.19E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SMART SM01058 475 572 7.2E-40 T 11-10-2018 IPR003711 CarD-like/TRCF domain TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Gene3D G3DSA:3.40.50.300 538 777 3.1E-228 T 11-10-2018 TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Pfam PF00271 Helicase conserved C-terminal domain 803 905 1.0E-16 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SMART SM00487 596 786 6.6E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 155 1073 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Pfam PF02559 CarD-like/TRCF domain 476 571 3.1E-27 T 11-10-2018 IPR003711 CarD-like/TRCF domain TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1100 25.584 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SUPERFAMILY SSF52540 778 986 6.82E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 SMART SM00490 822 906 7.9E-18 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Pfam PF03461 TRCF domain 1001 1091 4.0E-22 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TP_0344 5c34e755ce79e681825845158e2dfe3f 1140 Gene3D G3DSA:3.40.50.11180 32 345 3.3E-40 T 11-10-2018 TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 SUPERFAMILY SSF51905 7 270 1.89E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 Gene3D G3DSA:3.50.50.60 327 473 5.5E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 Gene3D G3DSA:3.50.50.60 2 240 3.4E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 SMART SM01228 555 626 1.8E-29 T 11-10-2018 TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 Gene3D G3DSA:1.10.150.570 578 630 1.9E-18 T 11-10-2018 TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 Pfam PF13932 GidA associated domain 416 624 1.6E-63 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 629 1.8E-231 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 Pfam PF01134 Glucose inhibited division protein A 9 406 1.9E-148 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 630 38.043 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 282 296 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TP_0044 e23dd52bc734e4400f6e9dc14f8641fe 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 377 400 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TP_0096 f8eb8eb7bf50733346a4e8be6b8f149e 120 Gene3D G3DSA:1.20.120.910 1 120 4.5E-29 T 11-10-2018 TP_0096 f8eb8eb7bf50733346a4e8be6b8f149e 120 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 80 114 3.5E-14 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TP_0096 f8eb8eb7bf50733346a4e8be6b8f149e 120 SUPERFAMILY SSF109635 7 80 2.75E-8 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily TP_0096 f8eb8eb7bf50733346a4e8be6b8f149e 120 SUPERFAMILY SSF57716 82 118 7.6E-10 T 11-10-2018 TP_0096 f8eb8eb7bf50733346a4e8be6b8f149e 120 PRINTS PR00618 DksA/TraR zinc finger signature 97 109 4.3E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria TP_0096 f8eb8eb7bf50733346a4e8be6b8f149e 120 PRINTS PR00618 DksA/TraR zinc finger signature 85 96 4.3E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria TP_0431 ac1a0f4fbe8187ee1f6bc5ddc4ca0b7e 273 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 254 5.0E-92 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TP_0431 ac1a0f4fbe8187ee1f6bc5ddc4ca0b7e 273 Pfam PF03309 Type III pantothenate kinase 1 210 6.4E-48 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TP_0431 ac1a0f4fbe8187ee1f6bc5ddc4ca0b7e 273 SUPERFAMILY SSF53067 129 255 1.94E-30 T 11-10-2018 TP_0431 ac1a0f4fbe8187ee1f6bc5ddc4ca0b7e 273 Gene3D G3DSA:3.30.420.40 97 259 1.8E-43 T 11-10-2018 TP_0431 ac1a0f4fbe8187ee1f6bc5ddc4ca0b7e 273 Gene3D G3DSA:3.30.420.40 1 91 3.1E-18 T 11-10-2018 TP_0431 ac1a0f4fbe8187ee1f6bc5ddc4ca0b7e 273 SUPERFAMILY SSF53067 1 126 1.55E-17 T 11-10-2018 TP_0431 ac1a0f4fbe8187ee1f6bc5ddc4ca0b7e 273 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 258 25.193 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TP_0687 c92627061294369d99a1849a34cbde0f 686 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 672 3.1E-257 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 TP_0687 c92627061294369d99a1849a34cbde0f 686 SMART SM00490 509 593 2.4E-21 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0687 c92627061294369d99a1849a34cbde0f 686 Pfam PF00270 DEAD/DEAH box helicase 274 438 1.5E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TP_0687 c92627061294369d99a1849a34cbde0f 686 SMART SM00487 267 464 1.5E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TP_0687 c92627061294369d99a1849a34cbde0f 686 SUPERFAMILY SSF50249 6 170 3.6E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0687 c92627061294369d99a1849a34cbde0f 686 SUPERFAMILY SSF52540 318 604 6.21E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0687 c92627061294369d99a1849a34cbde0f 686 Pfam PF17191 RecG wedge domain 12 163 1.7E-15 T 11-10-2018 IPR033454 RecG, wedge domain TP_0687 c92627061294369d99a1849a34cbde0f 686 Pfam PF00271 Helicase conserved C-terminal domain 472 592 3.1E-18 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0687 c92627061294369d99a1849a34cbde0f 686 Gene3D G3DSA:3.40.50.300 254 461 1.0E-77 T 11-10-2018 TP_0687 c92627061294369d99a1849a34cbde0f 686 Gene3D G3DSA:3.40.50.300 462 634 4.0E-52 T 11-10-2018 TP_0094 cd92788640d18496ae54b90c5e8e82d7 336 Gene3D G3DSA:3.40.50.10750 143 306 2.9E-123 T 11-10-2018 TP_0094 cd92788640d18496ae54b90c5e8e82d7 336 SUPERFAMILY SSF53659 1 333 1.6E-84 T 11-10-2018 TP_0094 cd92788640d18496ae54b90c5e8e82d7 336 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 330 3.2E-137 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TP_0094 cd92788640d18496ae54b90c5e8e82d7 336 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 329 7.1E-110 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TP_0094 cd92788640d18496ae54b90c5e8e82d7 336 Gene3D G3DSA:3.40.50.10950 10 332 2.9E-123 T 11-10-2018 TP_0094 cd92788640d18496ae54b90c5e8e82d7 336 PIRSF PIRSF000428 1 336 2.5E-114 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TP_0436 ad55b4b6dfa5ce5d77253851a0139b7f 360 Gene3D G3DSA:3.10.310.30 232 351 1.8E-22 T 11-10-2018 TP_0436 ad55b4b6dfa5ce5d77253851a0139b7f 360 Gene3D G3DSA:3.90.1640.10 31 231 9.8E-42 T 11-10-2018 TP_0436 ad55b4b6dfa5ce5d77253851a0139b7f 360 SUPERFAMILY SSF64182 44 340 4.97E-55 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily TP_0436 ad55b4b6dfa5ce5d77253851a0139b7f 360 Pfam PF02272 DHHA1 domain 224 344 2.2E-10 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TP_0436 ad55b4b6dfa5ce5d77253851a0139b7f 360 Pfam PF01368 DHH family 44 185 9.8E-12 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TP_0934 ad19451e0532413e1e400327a1b0956a 407 Pfam PF00375 Sodium:dicarboxylate symporter family 4 392 7.8E-28 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 TP_0934 ad19451e0532413e1e400327a1b0956a 407 Gene3D G3DSA:1.10.3860.10 1 404 2.3E-32 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TP_0934 ad19451e0532413e1e400327a1b0956a 407 SUPERFAMILY SSF118215 4 392 1.7E-35 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TP_0276 d4bd83c3b3af6d676344cd0e09dd9388 294 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 25 282 1.8E-30 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TP_0276 d4bd83c3b3af6d676344cd0e09dd9388 294 SUPERFAMILY SSF75217 91 283 3.34E-30 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TP_0276 d4bd83c3b3af6d676344cd0e09dd9388 294 Gene3D G3DSA:3.40.1280.10 16 288 1.4E-47 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TP_0276 d4bd83c3b3af6d676344cd0e09dd9388 294 Pfam PF04452 RNA methyltransferase 31 277 2.2E-40 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TP_0276 d4bd83c3b3af6d676344cd0e09dd9388 294 SUPERFAMILY SSF88697 24 71 5.14E-8 T 11-10-2018 IPR015947 PUA-like superfamily TP_0276 d4bd83c3b3af6d676344cd0e09dd9388 294 PIRSF PIRSF015601 15 286 1.7E-72 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TP_0809 b666d2b708e7f9b66398e900042ac828 254 Gene3D G3DSA:1.10.1520.10 23 169 6.6E-40 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TP_0809 b666d2b708e7f9b66398e900042ac828 254 Hamap MF_00104 Ribonuclease 3 [rnc]. 27 245 28.456 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TP_0809 b666d2b708e7f9b66398e900042ac828 254 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 27 248 1.0E-74 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TP_0809 b666d2b708e7f9b66398e900042ac828 254 SMART SM00535 39 175 5.8E-52 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TP_0809 b666d2b708e7f9b66398e900042ac828 254 SUPERFAMILY SSF54768 136 248 3.14E-22 T 11-10-2018 TP_0809 b666d2b708e7f9b66398e900042ac828 254 SUPERFAMILY SSF69065 18 183 7.5E-43 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TP_0809 b666d2b708e7f9b66398e900042ac828 254 SMART SM00358 182 249 3.3E-25 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain TP_0809 b666d2b708e7f9b66398e900042ac828 254 Pfam PF14622 Ribonuclease-III-like 38 169 9.6E-31 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TP_0809 b666d2b708e7f9b66398e900042ac828 254 ProSitePatterns PS00517 Ribonuclease III family signature. 64 72 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TP_0809 b666d2b708e7f9b66398e900042ac828 254 Pfam PF00035 Double-stranded RNA binding motif 182 248 3.7E-14 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain TP_0809 b666d2b708e7f9b66398e900042ac828 254 Gene3D G3DSA:3.30.160.20 181 248 6.0E-20 T 11-10-2018 TP_0460 a859827ceb54ee79c9643b5f5950fe6c 235 SMART SM00028 87 120 32.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0460 a859827ceb54ee79c9643b5f5950fe6c 235 SMART SM00028 53 86 5.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0460 a859827ceb54ee79c9643b5f5950fe6c 235 SMART SM00028 155 188 1.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0460 a859827ceb54ee79c9643b5f5950fe6c 235 SMART SM00028 121 154 0.01 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0460 a859827ceb54ee79c9643b5f5950fe6c 235 Gene3D G3DSA:1.25.40.10 39 220 3.0E-32 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0460 a859827ceb54ee79c9643b5f5950fe6c 235 Pfam PF13181 Tetratricopeptide repeat 157 184 0.0042 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0460 a859827ceb54ee79c9643b5f5950fe6c 235 Pfam PF13181 Tetratricopeptide repeat 122 153 2.6E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0460 a859827ceb54ee79c9643b5f5950fe6c 235 SUPERFAMILY SSF48452 52 217 1.41E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SUPERFAMILY SSF48452 47 218 2.28E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 Pfam PF13432 Tetratricopeptide repeat 123 177 2.3E-9 T 11-10-2018 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SMART SM00028 113 146 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SMART SM00028 342 375 18.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SMART SM00028 181 214 1.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SMART SM00028 215 248 32.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SMART SM00028 283 316 24.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SMART SM00028 147 180 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SMART SM00028 249 282 59.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SMART SM00028 45 78 0.94 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SMART SM00028 79 112 0.055 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 Pfam PF14559 Tetratricopeptide repeat 58 106 2.8E-6 T 11-10-2018 TP_0648 d8bef40177aa408e06188522ff3d73be 682 Gene3D G3DSA:1.25.40.10 42 501 1.4E-47 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 SUPERFAMILY SSF48452 181 316 1.33E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0648 d8bef40177aa408e06188522ff3d73be 682 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 230 305 4.2E-7 T 11-10-2018 TP_0184 3346b0c33db6e819d9fcbaa63b12c5aa 134 SUPERFAMILY SSF74982 1 112 1.14E-38 T 11-10-2018 IPR023620 Small protein B TP_0184 3346b0c33db6e819d9fcbaa63b12c5aa 134 Gene3D G3DSA:2.40.280.10 1 109 2.9E-38 T 11-10-2018 IPR023620 Small protein B TP_0184 3346b0c33db6e819d9fcbaa63b12c5aa 134 Pfam PF01668 SmpB protein 1 129 5.9E-48 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TP_0184 3346b0c33db6e819d9fcbaa63b12c5aa 134 TIGRFAM TIGR00086 smpB: SsrA-binding protein 1 129 4.2E-51 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TP_0184 3346b0c33db6e819d9fcbaa63b12c5aa 134 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 1 112 7.0E-61 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TP_0184 3346b0c33db6e819d9fcbaa63b12c5aa 134 ProSitePatterns PS01317 SsrA-binding protein. 7 19 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site TP_0184 3346b0c33db6e819d9fcbaa63b12c5aa 134 Hamap MF_00023 SsrA-binding protein [smpB]. 1 134 54.263 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 Pfam PF07719 Tetratricopeptide repeat 169 199 3.0E-5 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 SMART SM00028 28 61 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 SMART SM00028 62 95 430.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 SMART SM00028 96 129 260.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 SMART SM00028 167 200 0.28 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 SMART SM00028 133 166 48.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 SUPERFAMILY SSF48452 33 206 6.83E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 Gene3D G3DSA:1.25.40.10 132 213 4.4E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 Pfam PF13429 Tetratricopeptide repeat 40 136 5.6E-7 T 11-10-2018 TP_0268 fbdf9acd7d29b30aa409e9d5ae470cf3 217 Gene3D G3DSA:1.25.40.10 31 131 1.7E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0361 e616c4c9da7af63844a65e9323cd10fd 282 Pfam PF01553 Acyltransferase 80 205 1.8E-19 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TP_0361 e616c4c9da7af63844a65e9323cd10fd 282 SMART SM00563 88 210 1.1E-28 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TP_0361 e616c4c9da7af63844a65e9323cd10fd 282 SUPERFAMILY SSF69593 28 261 2.88E-22 T 11-10-2018 TP_0024 52614a7c4b0b84fe7bec2a8149178b3f 236 SUPERFAMILY SSF51735 2 131 1.2E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0024 52614a7c4b0b84fe7bec2a8149178b3f 236 SUPERFAMILY SSF116726 137 213 1.96E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TP_0024 52614a7c4b0b84fe7bec2a8149178b3f 236 Pfam PF02254 TrkA-N domain 4 119 5.0E-15 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TP_0024 52614a7c4b0b84fe7bec2a8149178b3f 236 Gene3D G3DSA:3.30.70.1450 135 215 1.1E-18 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TP_0024 52614a7c4b0b84fe7bec2a8149178b3f 236 Gene3D G3DSA:3.40.50.720 1 134 2.4E-18 T 11-10-2018 TP_0024 52614a7c4b0b84fe7bec2a8149178b3f 236 Pfam PF02080 TrkA-C domain 149 211 4.6E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TP_0572 a69427fe0b50b5a454a8798662a071e7 360 Pfam PF04205 FMN-binding domain 284 355 6.9E-10 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TP_0572 a69427fe0b50b5a454a8798662a071e7 360 Gene3D G3DSA:3.90.1010.20 305 359 8.0E-5 T 11-10-2018 TP_0572 a69427fe0b50b5a454a8798662a071e7 360 SMART SM00900 284 358 2.5E-11 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TP_0572 a69427fe0b50b5a454a8798662a071e7 360 Pfam PF01794 Ferric reductase like transmembrane component 68 177 4.3E-9 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain TP_0254 1aff8f234e2960226ffd2c4af559572c 519 SMART SM00959 102 146 1.0E-7 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 SUPERFAMILY SSF50249 148 222 1.94E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0254 1aff8f234e2960226ffd2c4af559572c 519 Pfam PF07498 Rho termination factor, N-terminal domain 102 146 7.1E-11 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 Gene3D G3DSA:2.40.50.140 146 222 3.6E-33 T 11-10-2018 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 255 459 1.3E-19 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 Gene3D G3DSA:3.40.50.300 229 513 7.5E-125 T 11-10-2018 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 SUPERFAMILY SSF52540 189 467 6.44E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0254 1aff8f234e2960226ffd2c4af559572c 519 Pfam PF07497 Rho termination factor, RNA-binding domain 151 222 1.0E-29 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 SMART SM00357 151 217 8.0E-18 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 TIGRFAM TIGR00767 rho: transcription termination factor Rho 100 513 8.4E-219 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 Hamap MF_01884 Transcription termination factor Rho [rho]. 100 515 217.427 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 Gene3D G3DSA:1.10.720.10 97 145 8.2E-7 T 11-10-2018 TP_0254 1aff8f234e2960226ffd2c4af559572c 519 SMART SM00382 266 451 3.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0667 1767210758e17975707a0596f89ff63d 555 SUPERFAMILY SSF52540 289 486 4.28E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0667 1767210758e17975707a0596f89ff63d 555 PRINTS PR00988 Uridine kinase signature 288 305 2.9E-9 T 11-10-2018 TP_0667 1767210758e17975707a0596f89ff63d 555 PRINTS PR00988 Uridine kinase signature 365 380 2.9E-9 T 11-10-2018 TP_0667 1767210758e17975707a0596f89ff63d 555 PRINTS PR00988 Uridine kinase signature 320 331 2.9E-9 T 11-10-2018 TP_0667 1767210758e17975707a0596f89ff63d 555 SUPERFAMILY SSF55186 73 243 1.13E-20 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TP_0667 1767210758e17975707a0596f89ff63d 555 SMART SM00382 287 452 0.0051 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0667 1767210758e17975707a0596f89ff63d 555 Gene3D G3DSA:3.40.50.300 223 499 1.4E-51 T 11-10-2018 TP_0667 1767210758e17975707a0596f89ff63d 555 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 290 488 4.7E-20 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 TP_0667 1767210758e17975707a0596f89ff63d 555 Gene3D G3DSA:3.30.980.10 72 210 6.2E-7 T 11-10-2018 TP_0354 055bc497aae21811e4a655fb0f73e58a 208 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TP_0354 055bc497aae21811e4a655fb0f73e58a 208 Pfam PF02223 Thymidylate kinase 10 197 1.2E-44 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 TP_0354 055bc497aae21811e4a655fb0f73e58a 208 Hamap MF_00165 Thymidylate kinase [tmk]. 6 205 22.205 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TP_0354 055bc497aae21811e4a655fb0f73e58a 208 Gene3D G3DSA:3.40.50.300 6 204 5.3E-51 T 11-10-2018 TP_0354 055bc497aae21811e4a655fb0f73e58a 208 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 197 2.1E-46 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TP_0354 055bc497aae21811e4a655fb0f73e58a 208 SUPERFAMILY SSF52540 7 204 1.12E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0162 732a907af190306f5321f4f7f3d3a98a 350 SUPERFAMILY SSF46785 260 334 1.36E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TP_0162 732a907af190306f5321f4f7f3d3a98a 350 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 239 1.5E-101 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 TP_0162 732a907af190306f5321f4f7f3d3a98a 350 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 331 2.0E-37 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TP_0162 732a907af190306f5321f4f7f3d3a98a 350 Gene3D G3DSA:1.10.8.60 186 260 6.7E-29 T 11-10-2018 TP_0162 732a907af190306f5321f4f7f3d3a98a 350 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 350 149.157 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TP_0162 732a907af190306f5321f4f7f3d3a98a 350 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 1.8E-30 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TP_0162 732a907af190306f5321f4f7f3d3a98a 350 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 2.5E-144 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TP_0162 732a907af190306f5321f4f7f3d3a98a 350 Gene3D G3DSA:3.40.50.300 24 185 4.5E-35 T 11-10-2018 TP_0162 732a907af190306f5321f4f7f3d3a98a 350 SMART SM00382 55 188 7.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0162 732a907af190306f5321f4f7f3d3a98a 350 SUPERFAMILY SSF52540 24 253 2.91E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0162 732a907af190306f5321f4f7f3d3a98a 350 Gene3D G3DSA:1.10.10.10 261 341 3.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 Gene3D G3DSA:3.30.70.1450 382 464 1.1E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 SUPERFAMILY SSF116726 379 462 4.71E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 Gene3D G3DSA:3.40.50.720 231 379 3.4E-23 T 11-10-2018 TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 Pfam PF02254 TrkA-N domain 233 364 2.0E-17 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 Pfam PF02254 TrkA-N domain 3 121 2.7E-20 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 SUPERFAMILY SSF51735 1 147 3.54E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 SUPERFAMILY SSF51735 232 391 5.91E-17 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 Pfam PF02080 TrkA-C domain 155 223 5.8E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 Pfam PF02080 TrkA-C domain 395 463 1.1E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 Gene3D G3DSA:3.30.70.1450 140 224 5.5E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 Gene3D G3DSA:3.40.50.720 1 137 1.5E-20 T 11-10-2018 TP_0513 7013f0e6ce741b4958f6e0efa07953fe 466 SUPERFAMILY SSF116726 139 224 2.22E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TP_0190 8eb95f6a758c0ed06b9137e3d7ce0095 216 Pfam PF00573 Ribosomal protein L4/L1 family 16 202 1.4E-55 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 TP_0190 8eb95f6a758c0ed06b9137e3d7ce0095 216 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 29.248 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0190 8eb95f6a758c0ed06b9137e3d7ce0095 216 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 7.4E-64 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0190 8eb95f6a758c0ed06b9137e3d7ce0095 216 SUPERFAMILY SSF52166 3 205 6.28E-63 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TP_0190 8eb95f6a758c0ed06b9137e3d7ce0095 216 Gene3D G3DSA:3.40.1370.10 1 214 1.4E-62 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 5.0E-59 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 Pfam PF01467 Cytidylyltransferase-like 4 132 4.7E-15 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 7.0E-36 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 7.0E-36 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 7.0E-36 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 48 72 7.0E-36 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 84 100 7.0E-36 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 56 1.4E-11 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 Gene3D G3DSA:3.40.50.620 2 159 6.9E-45 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 SUPERFAMILY SSF52374 2 155 3.28E-37 T 11-10-2018 TP_0283 0f1cb7a9d1d689267ac0f8965447ac63 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 157 29.649 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TP_0498 cc8f2db737ef0034701faf54d5b340cf 287 PIRSF PIRSF038471 3 285 3.3E-42 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TP_0498 cc8f2db737ef0034701faf54d5b340cf 287 Gene3D G3DSA:2.40.10.340 121 275 7.5E-31 T 11-10-2018 TP_0498 cc8f2db737ef0034701faf54d5b340cf 287 Pfam PF04085 rod shape-determining protein MreC 123 276 2.9E-32 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TP_0498 cc8f2db737ef0034701faf54d5b340cf 287 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 17 277 1.6E-42 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TP_0498 cc8f2db737ef0034701faf54d5b340cf 287 Gene3D G3DSA:2.40.10.350 184 264 7.5E-31 T 11-10-2018 TP_0889 a609740be6e91650c1088299893ef2d5 366 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 200 242 4.1E-8 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 TP_0889 a609740be6e91650c1088299893ef2d5 366 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 7 363 15.216 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0889 a609740be6e91650c1088299893ef2d5 366 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 29 199 2.7E-38 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 TP_0889 a609740be6e91650c1088299893ef2d5 366 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 8 238 2.8E-90 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0889 a609740be6e91650c1088299893ef2d5 366 SUPERFAMILY SSF55120 7 242 8.06E-60 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0889 a609740be6e91650c1088299893ef2d5 366 Gene3D G3DSA:3.30.2350.10 3 253 1.3E-68 T 11-10-2018 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 Gene3D G3DSA:1.10.287.610 103 150 1.2E-91 T 11-10-2018 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 Gene3D G3DSA:3.40.50.10490 9 219 1.2E-91 T 11-10-2018 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 226 42.986 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.9E-39 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 Pfam PF00318 Ribosomal protein S2 9 224 8.0E-97 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 1.0E-112 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 SUPERFAMILY SSF52313 6 227 1.31E-94 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily TP_0606 960bbd6d9f1c9cad3219057ac413633e 291 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 Gene3D G3DSA:3.30.70.1050 2 122 1.1E-25 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 Hamap MF_00303 Trigger factor [tig]. 3 425 16.816 T 11-10-2018 IPR005215 Trigger factor GO:0015031 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 266 419 1.5E-38 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 TIGRFAM TIGR00115 tig: trigger factor 14 419 1.2E-90 T 11-10-2018 IPR005215 Trigger factor GO:0015031 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 SUPERFAMILY SSF109998 252 425 8.54E-32 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 SUPERFAMILY SSF102735 4 137 1.15E-25 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 SUPERFAMILY SSF54534 139 250 6.62E-11 T 11-10-2018 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 Gene3D G3DSA:1.10.3120.10 123 420 4.9E-46 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 PIRSF PIRSF003095 3 442 6.0E-97 T 11-10-2018 IPR005215 Trigger factor GO:0015031 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 Pfam PF05697 Bacterial trigger factor protein (TF) 8 150 3.9E-30 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 TP_0506 2b2b3d8966b8b452fb3dcd24509c669f 442 Gene3D G3DSA:3.10.50.40 157 250 4.9E-46 T 11-10-2018 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 Gene3D G3DSA:3.40.50.300 230 414 1.1E-32 T 11-10-2018 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 SMART SM00490 479 562 5.0E-9 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 SUPERFAMILY SSF52540 254 575 2.89E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 Pfam PF04851 Type III restriction enzyme, res subunit 235 388 3.9E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 414 599 1.1E-44 T 11-10-2018 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 SMART SM00487 233 410 7.2E-20 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 Pfam PF13625 Helicase conserved C-terminal domain 8 132 7.2E-34 T 11-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 418 440 2.8E-34 T 11-10-2018 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 251 273 2.8E-34 T 11-10-2018 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 6 26 2.8E-34 T 11-10-2018 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 537 562 2.8E-34 T 11-10-2018 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 353 373 2.8E-34 T 11-10-2018 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 518 536 2.8E-34 T 11-10-2018 TP_0380 183ab8342be27313ee97c51ec38b0d3a 606 Gene3D G3DSA:3.40.50.300 415 606 1.3E-43 T 11-10-2018 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 570 596 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 401 414 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 Pfam PF04542 Sigma-70 region 2 377 446 1.1E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 Gene3D G3DSA:1.10.10.10 450 525 1.4E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 Gene3D G3DSA:1.10.10.10 526 611 8.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 Pfam PF00140 Sigma-70 factor, region 1.2 118 148 1.1E-13 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 373 598 3.2E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 610 42.76 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 PRINTS PR00046 Major sigma-70 factor signature 585 596 2.5E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 PRINTS PR00046 Major sigma-70 factor signature 549 561 2.5E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 PRINTS PR00046 Major sigma-70 factor signature 401 414 2.5E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 PRINTS PR00046 Major sigma-70 factor signature 425 433 2.5E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 PRINTS PR00046 Major sigma-70 factor signature 570 585 2.5E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 Pfam PF04539 Sigma-70 region 3 456 530 1.8E-27 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 SUPERFAMILY SSF88946 136 444 2.2E-54 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 Pfam PF04545 Sigma-70, region 4 546 598 1.5E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 373 609 2.4E-116 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 Gene3D G3DSA:1.10.601.10 116 449 1.8E-81 T 11-10-2018 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 SUPERFAMILY SSF88659 450 523 3.05E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 Pfam PF03979 Sigma-70 factor, region 1.1 7 66 4.7E-7 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 TP_0493 4d3551b4a11974a4bcdf0318e63e44b0 611 SUPERFAMILY SSF88659 507 609 2.62E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TP_0152 91e0cda7e8f972b116a5e603bef65128 514 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TP_0152 91e0cda7e8f972b116a5e603bef65128 514 Pfam PF10531 SLBB domain 337 372 4.2E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TP_0152 91e0cda7e8f972b116a5e603bef65128 514 SUPERFAMILY SSF142984 338 402 5.36E-5 T 11-10-2018 TP_0152 91e0cda7e8f972b116a5e603bef65128 514 Pfam PF13375 RnfC Barrel sandwich hybrid domain 48 122 1.7E-10 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain TP_0152 91e0cda7e8f972b116a5e603bef65128 514 Gene3D G3DSA:1.10.1060.10 405 483 4.1E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TP_0152 91e0cda7e8f972b116a5e603bef65128 514 SUPERFAMILY SSF46548 414 482 8.63E-11 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 SUPERFAMILY SSF53697 29 513 4.7E-135 T 11-10-2018 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 Gene3D G3DSA:3.40.50.10490 96 295 1.7E-147 T 11-10-2018 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 44 515 36.061 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 Gene3D G3DSA:1.10.1390.10 497 517 9.6E-6 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 Pfam PF00342 Phosphoglucose isomerase 51 513 5.8E-111 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 Gene3D G3DSA:3.40.50.10490 33 496 1.7E-147 T 11-10-2018 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 488 505 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 474 5.2E-41 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 PRINTS PR00662 Glucose-6-phosphate isomerase signature 342 363 5.2E-41 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 501 5.2E-41 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 PRINTS PR00662 Glucose-6-phosphate isomerase signature 264 282 5.2E-41 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 PRINTS PR00662 Glucose-6-phosphate isomerase signature 474 488 5.2E-41 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0475 0a0733fd51d3de0757c0a72e84fbdd9f 535 PRINTS PR00662 Glucose-6-phosphate isomerase signature 152 171 5.2E-41 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0440 f87e71ab6cea9d1bd6cded8cc2bf825d 383 SUPERFAMILY SSF53383 2 278 1.53E-29 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TP_0440 f87e71ab6cea9d1bd6cded8cc2bf825d 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 42 278 1.5E-19 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TP_0440 f87e71ab6cea9d1bd6cded8cc2bf825d 383 Gene3D G3DSA:3.40.640.10 2 193 2.7E-17 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TP_0997 bce678039e329c62a527316e5a1302f7 598 Gene3D G3DSA:3.90.226.10 309 533 1.3E-127 T 11-10-2018 TP_0997 bce678039e329c62a527316e5a1302f7 598 PIRSF PIRSF001217 4 598 1.3E-185 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 TP_0997 bce678039e329c62a527316e5a1302f7 598 Pfam PF01343 Peptidase family S49 133 286 4.2E-29 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TP_0997 bce678039e329c62a527316e5a1302f7 598 Pfam PF01343 Peptidase family S49 385 534 9.8E-38 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TP_0997 bce678039e329c62a527316e5a1302f7 598 SUPERFAMILY SSF52096 36 279 7.95E-15 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TP_0997 bce678039e329c62a527316e5a1302f7 598 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 13 589 1.7E-263 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 TP_0997 bce678039e329c62a527316e5a1302f7 598 Gene3D G3DSA:3.90.226.10 88 308 1.3E-127 T 11-10-2018 TP_0997 bce678039e329c62a527316e5a1302f7 598 SUPERFAMILY SSF52096 313 523 3.48E-40 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TP_0997 bce678039e329c62a527316e5a1302f7 598 Gene3D G3DSA:3.40.1750.10 180 492 1.3E-127 T 11-10-2018 TP_0187 05c3792d9c5550148a2a230e5098385c 495 SUPERFAMILY SSF50447 306 402 3.12E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TP_0187 05c3792d9c5550148a2a230e5098385c 495 Pfam PF00009 Elongation factor Tu GTP binding domain 112 302 2.4E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0187 05c3792d9c5550148a2a230e5098385c 495 Pfam PF03144 Elongation factor Tu domain 2 326 394 2.7E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TP_0187 05c3792d9c5550148a2a230e5098385c 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 113 250 4.0E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TP_0187 05c3792d9c5550148a2a230e5098385c 495 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 101 494 2.0E-201 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0187 05c3792d9c5550148a2a230e5098385c 495 Pfam PF03143 Elongation factor Tu C-terminal domain 399 493 7.4E-31 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TP_0187 05c3792d9c5550148a2a230e5098385c 495 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 151 166 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TP_0187 05c3792d9c5550148a2a230e5098385c 495 Hamap MF_00118_B Elongation factor Tu [tuf]. 101 495 56.7 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0187 05c3792d9c5550148a2a230e5098385c 495 Gene3D G3DSA:2.40.30.10 402 494 5.3E-38 T 11-10-2018 TP_0187 05c3792d9c5550148a2a230e5098385c 495 SUPERFAMILY SSF50465 399 493 2.5E-33 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TP_0187 05c3792d9c5550148a2a230e5098385c 495 PRINTS PR00315 GTP-binding elongation factor signature 114 127 7.9E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0187 05c3792d9c5550148a2a230e5098385c 495 PRINTS PR00315 GTP-binding elongation factor signature 178 188 7.9E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0187 05c3792d9c5550148a2a230e5098385c 495 PRINTS PR00315 GTP-binding elongation factor signature 158 166 7.9E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0187 05c3792d9c5550148a2a230e5098385c 495 PRINTS PR00315 GTP-binding elongation factor signature 194 205 7.9E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0187 05c3792d9c5550148a2a230e5098385c 495 PRINTS PR00315 GTP-binding elongation factor signature 231 240 7.9E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0187 05c3792d9c5550148a2a230e5098385c 495 Gene3D G3DSA:2.40.30.10 309 401 2.9E-35 T 11-10-2018 TP_0187 05c3792d9c5550148a2a230e5098385c 495 SUPERFAMILY SSF52540 109 327 1.5E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0187 05c3792d9c5550148a2a230e5098385c 495 Gene3D G3DSA:3.40.50.300 101 304 1.6E-62 T 11-10-2018 TP_0244 fd7626fdefad642ac16eb27b434234a6 156 PIRSF PIRSF002122 5 156 1.6E-55 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 TP_0244 fd7626fdefad642ac16eb27b434234a6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 33.842 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TP_0244 fd7626fdefad642ac16eb27b434234a6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 8.2E-69 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TP_0244 fd7626fdefad642ac16eb27b434234a6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0244 fd7626fdefad642ac16eb27b434234a6 156 Gene3D G3DSA:1.10.455.10 2 156 5.2E-57 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TP_0244 fd7626fdefad642ac16eb27b434234a6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.5E-60 T 11-10-2018 IPR023798 Ribosomal protein S7 domain TP_0244 fd7626fdefad642ac16eb27b434234a6 156 SUPERFAMILY SSF47973 7 149 2.22E-56 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 Hamap MF_00050 Elongation factor Ts [tsf]. 1 290 43.925 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 270 2.4E-58 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 Pfam PF00889 Elongation factor TS 79 286 2.1E-46 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 ProSitePatterns PS01127 Elongation factor Ts signature 2. 82 92 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 SUPERFAMILY SSF54713 152 280 5.1E-28 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 SUPERFAMILY SSF54713 53 143 2.09E-12 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 Gene3D G3DSA:3.30.479.20 154 288 4.2E-33 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 Gene3D G3DSA:3.30.479.20 56 145 1.1E-14 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 SUPERFAMILY SSF46934 1 55 1.22E-13 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 Gene3D G3DSA:1.10.8.10 1 55 2.0E-17 T 11-10-2018 TP_0605 51ea737b5fbbaec92b78233b7e520da0 290 Gene3D G3DSA:1.10.286.20 203 247 4.2E-33 T 11-10-2018 TP_0229 e5d4fbbf90577d980ddf97f191423cb9 277 Pfam PF03167 Uracil DNA glycosylase superfamily 114 260 1.0E-46 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TP_0229 e5d4fbbf90577d980ddf97f191423cb9 277 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 99 268 6.1E-76 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 TP_0229 e5d4fbbf90577d980ddf97f191423cb9 277 Gene3D G3DSA:3.40.470.10 90 276 2.0E-70 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TP_0229 e5d4fbbf90577d980ddf97f191423cb9 277 SMART SM00987 113 260 1.9E-40 T 11-10-2018 TP_0229 e5d4fbbf90577d980ddf97f191423cb9 277 SMART SM00986 113 260 1.9E-40 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TP_0229 e5d4fbbf90577d980ddf97f191423cb9 277 SUPERFAMILY SSF52141 90 266 1.14E-62 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TP_1028 ff51cb9fb2dfd1d14677238530fdfc2b 670 Gene3D G3DSA:1.10.10.160 108 194 1.8E-85 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily TP_1028 ff51cb9fb2dfd1d14677238530fdfc2b 670 Gene3D G3DSA:3.40.50.300 287 656 6.8E-94 T 11-10-2018 TP_1028 ff51cb9fb2dfd1d14677238530fdfc2b 670 SUPERFAMILY SSF52540 2 662 1.49E-145 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_1028 ff51cb9fb2dfd1d14677238530fdfc2b 670 Pfam PF13361 UvrD-like helicase C-terminal domain 282 635 2.2E-57 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TP_1028 ff51cb9fb2dfd1d14677238530fdfc2b 670 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 275 9.2E-71 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TP_1028 ff51cb9fb2dfd1d14677238530fdfc2b 670 Gene3D G3DSA:1.10.486.10 387 562 6.8E-94 T 11-10-2018 TP_1028 ff51cb9fb2dfd1d14677238530fdfc2b 670 Gene3D G3DSA:3.40.50.300 8 277 1.8E-85 T 11-10-2018 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 SUPERFAMILY SSF52374 4 396 1.66E-87 T 11-10-2018 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 1.5E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 1.5E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 PRINTS PR01041 Methionyl-tRNA synthetase signature 396 407 1.5E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 1.5E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 PRINTS PR01041 Methionyl-tRNA synthetase signature 301 316 1.5E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 1.5E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 Gene3D G3DSA:3.40.50.620 5 391 1.1E-157 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0798 8308607f4fa5b36f459e3f3827f86032 811 SUPERFAMILY SSF57770 139 172 8.89E-9 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 596 37.675 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 Pfam PF01588 Putative tRNA binding domain 654 735 9.8E-22 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 Gene3D G3DSA:2.40.50.140 646 776 1.1E-26 T 11-10-2018 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 SUPERFAMILY SSF47323 401 597 9.16E-29 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 Gene3D G3DSA:2.20.28.20 138 172 1.1E-157 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 Gene3D G3DSA:1.10.730.10 392 596 6.7E-35 T 11-10-2018 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 Pfam PF09334 tRNA synthetases class I (M) 5 409 9.9E-163 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0798 8308607f4fa5b36f459e3f3827f86032 811 SUPERFAMILY SSF50249 654 752 3.18E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0798 8308607f4fa5b36f459e3f3827f86032 811 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 532 5.8E-165 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TP_0034 08415b345502a4185352f7a8e630fd31 316 SUPERFAMILY SSF53807 32 308 1.32E-76 T 11-10-2018 TP_0034 08415b345502a4185352f7a8e630fd31 316 Gene3D G3DSA:3.40.50.1980 202 308 1.7E-27 T 11-10-2018 TP_0034 08415b345502a4185352f7a8e630fd31 316 Pfam PF01297 Zinc-uptake complex component A periplasmic 36 306 2.8E-67 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00691 Adhesin B signature 287 305 3.9E-15 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00691 Adhesin B signature 143 162 3.9E-15 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00691 Adhesin B signature 58 76 3.9E-15 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00691 Adhesin B signature 199 216 3.9E-15 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00691 Adhesin B signature 33 54 3.9E-15 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0034 08415b345502a4185352f7a8e630fd31 316 Gene3D G3DSA:3.40.50.1980 24 201 3.7E-48 T 11-10-2018 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00690 Adhesin family signature 64 77 3.6E-14 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00690 Adhesin family signature 77 94 3.6E-14 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00690 Adhesin family signature 33 51 3.6E-14 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00690 Adhesin family signature 252 270 3.6E-14 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0034 08415b345502a4185352f7a8e630fd31 316 PRINTS PR00690 Adhesin family signature 199 220 3.6E-14 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0926 6ed9119b338dfaf88ea803800bb11333 512 Gene3D G3DSA:2.10.109.10 379 511 2.2E-7 T 11-10-2018 TP_0926 6ed9119b338dfaf88ea803800bb11333 512 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 61 198 6.2E-18 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TP_0926 6ed9119b338dfaf88ea803800bb11333 512 ProSitePatterns PS00760 Signal peptidases I lysine active site. 177 189 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 TP_0926 6ed9119b338dfaf88ea803800bb11333 512 Gene3D G3DSA:2.10.109.10 72 232 6.3E-15 T 11-10-2018 TP_0926 6ed9119b338dfaf88ea803800bb11333 512 Pfam PF00717 Peptidase S24-like 83 136 5.8E-8 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TP_0926 6ed9119b338dfaf88ea803800bb11333 512 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 76 92 3.7E-17 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TP_0926 6ed9119b338dfaf88ea803800bb11333 512 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 441 460 3.7E-17 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TP_0926 6ed9119b338dfaf88ea803800bb11333 512 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 175 187 3.7E-17 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TP_0926 6ed9119b338dfaf88ea803800bb11333 512 SUPERFAMILY SSF51306 76 207 2.04E-25 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TP_0926 6ed9119b338dfaf88ea803800bb11333 512 SUPERFAMILY SSF51306 418 510 5.23E-12 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TP_0893 77b5004597ed2f6cd37785298bf382a8 156 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 154 12.051 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 TP_0893 77b5004597ed2f6cd37785298bf382a8 156 Pfam PF17384 RimP C-terminal SH3 domain 93 153 3.2E-12 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal TP_0893 77b5004597ed2f6cd37785298bf382a8 156 Pfam PF02576 RimP N-terminal domain 14 89 1.2E-13 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal TP_0893 77b5004597ed2f6cd37785298bf382a8 156 SUPERFAMILY SSF75420 15 89 9.68E-5 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily TP_0249 f4f47c860e8421c16d090ad0a2fdb9b8 350 PIRSF PIRSF002892 1 350 1.1E-167 T 11-10-2018 IPR016369 Flagellar filament outer layer protein FlaA, Spirochaetes TP_0249 f4f47c860e8421c16d090ad0a2fdb9b8 350 Pfam PF04620 Flagellar filament outer layer protein Flaa 43 290 7.5E-100 T 11-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 TP_0603 24412c2f9cc348b0d6f6eb8115e290e0 228 Pfam PF01255 Putative undecaprenyl diphosphate synthase 7 225 8.9E-72 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TP_0603 24412c2f9cc348b0d6f6eb8115e290e0 228 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 226 35.718 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TP_0603 24412c2f9cc348b0d6f6eb8115e290e0 228 SUPERFAMILY SSF64005 2 220 1.18E-74 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TP_0603 24412c2f9cc348b0d6f6eb8115e290e0 228 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 171 188 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 TP_0603 24412c2f9cc348b0d6f6eb8115e290e0 228 Gene3D G3DSA:3.40.1180.10 1 220 3.5E-82 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TP_0603 24412c2f9cc348b0d6f6eb8115e290e0 228 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 2 225 6.2E-72 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TP_0912 a0272261ee389a9068239d2346be37dc 440 Pfam PF01966 HD domain 211 327 7.4E-12 T 11-10-2018 IPR006674 HD domain TP_0912 a0272261ee389a9068239d2346be37dc 440 SUPERFAMILY SSF109604 211 364 3.38E-22 T 11-10-2018 TP_0912 a0272261ee389a9068239d2346be37dc 440 Gene3D G3DSA:1.10.3210.10 27 367 3.0E-47 T 11-10-2018 TP_0912 a0272261ee389a9068239d2346be37dc 440 Pfam PF11871 Domain of unknown function (DUF3391) 27 172 7.1E-12 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 TP_0611 4cd998a420027bf5766adf142fdf32dd 259 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 5 242 4.5E-102 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 TP_0611 4cd998a420027bf5766adf142fdf32dd 259 Pfam PF00005 ABC transporter 20 171 1.3E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0611 4cd998a420027bf5766adf142fdf32dd 259 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0611 4cd998a420027bf5766adf142fdf32dd 259 SUPERFAMILY SSF52540 4 230 1.28E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0611 4cd998a420027bf5766adf142fdf32dd 259 Gene3D G3DSA:3.40.50.300 3 238 7.5E-52 T 11-10-2018 TP_0611 4cd998a420027bf5766adf142fdf32dd 259 SMART SM00382 29 221 0.0015 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0399 ad7014a9a0447e8e549776ad12e1dada 567 Gene3D G3DSA:3.30.300.30 124 225 2.0E-7 T 11-10-2018 TP_0399 ad7014a9a0447e8e549776ad12e1dada 567 Pfam PF01514 Secretory protein of YscJ/FliF family 31 224 1.0E-41 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF TP_0399 ad7014a9a0447e8e549776ad12e1dada 567 Pfam PF08345 Flagellar M-ring protein C-terminal 260 449 2.6E-21 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal TP_0399 ad7014a9a0447e8e549776ad12e1dada 567 PRINTS PR01009 Flagellar M-ring protein signature 123 141 7.0E-10 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TP_0399 ad7014a9a0447e8e549776ad12e1dada 567 PRINTS PR01009 Flagellar M-ring protein signature 200 218 7.0E-10 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TP_0399 ad7014a9a0447e8e549776ad12e1dada 567 PRINTS PR01009 Flagellar M-ring protein signature 155 169 7.0E-10 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TP_0399 ad7014a9a0447e8e549776ad12e1dada 567 PRINTS PR01009 Flagellar M-ring protein signature 274 292 7.0E-10 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TP_0399 ad7014a9a0447e8e549776ad12e1dada 567 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 9 566 2.2E-101 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TP_0032 3138126c09dbe83fa67d4151f274db9a 266 PIRSF PIRSF015601 1 247 1.2E-64 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TP_0032 3138126c09dbe83fa67d4151f274db9a 266 Pfam PF04452 RNA methyltransferase 19 241 4.0E-47 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TP_0032 3138126c09dbe83fa67d4151f274db9a 266 Gene3D G3DSA:3.40.1280.10 4 251 2.3E-30 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TP_0032 3138126c09dbe83fa67d4151f274db9a 266 SUPERFAMILY SSF75217 77 247 4.8E-31 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TP_0032 3138126c09dbe83fa67d4151f274db9a 266 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 240 9.7E-30 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 8 883 7.1E-275 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 SUPERFAMILY SSF52374 4 674 5.43E-130 T 11-10-2018 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 Pfam PF08264 Anticodon-binding domain of tRNA 724 872 4.2E-30 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 Gene3D G3DSA:3.40.50.620 15 651 1.5E-229 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 Gene3D G3DSA:3.90.740.10 198 427 1.5E-229 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1078 13.617 T 11-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 Gene3D G3DSA:1.10.730.10 667 864 4.4E-50 T 11-10-2018 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 661 2.3E-185 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 7.4E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 41 52 7.4E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 244 267 7.4E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 421 436 7.4E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 584 593 7.4E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 SUPERFAMILY SSF47323 681 932 6.54E-51 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0452 cb709b24b919b256d98aa21a7ee6d25f 1091 SUPERFAMILY SSF50677 233 423 2.83E-42 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 TIGRFAM TIGR00484 EF-G: translation elongation factor G 4 680 7.6E-234 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Pfam PF00679 Elongation factor G C-terminus 604 682 3.8E-23 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Gene3D G3DSA:3.30.70.870 401 475 5.3E-27 T 11-10-2018 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Pfam PF03764 Elongation factor G, domain IV 474 600 7.7E-16 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 SUPERFAMILY SSF50447 261 399 3.3E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 SUPERFAMILY SSF54980 397 474 1.83E-21 T 11-10-2018 IPR035647 EF-G domain III/V-like TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 SMART SM00838 603 682 3.0E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 175 1.3E-31 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 PRINTS PR00315 GTP-binding elongation factor signature 8 21 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 PRINTS PR00315 GTP-binding elongation factor signature 54 62 2.5E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Hamap MF_00054_B Elongation factor G [fusA]. 2 683 93.72 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Gene3D G3DSA:3.40.50.300 1 288 1.8E-106 T 11-10-2018 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 SUPERFAMILY SSF54211 474 602 1.18E-22 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Pfam PF14492 Elongation Factor G, domain II 399 473 4.2E-27 T 11-10-2018 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 SMART SM00889 475 601 1.3E-16 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 SUPERFAMILY SSF52540 3 276 1.36E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Gene3D G3DSA:2.40.30.10 289 400 8.1E-33 T 11-10-2018 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Pfam PF00009 Elongation factor Tu GTP binding domain 5 276 1.8E-66 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 SUPERFAMILY SSF54980 604 682 5.28E-21 T 11-10-2018 IPR035647 EF-G domain III/V-like TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Gene3D G3DSA:3.30.230.10 479 682 2.7E-51 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Gene3D G3DSA:3.30.70.240 607 677 2.7E-51 T 11-10-2018 TP_0450 de5bb6caa9b0423f23e280a2955cf2fb 683 Pfam PF03144 Elongation factor Tu domain 2 321 385 1.7E-13 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TP_0074 b2af78122ebc6da42e00fd6382206738 469 Pfam PF01547 Bacterial extracellular solute-binding protein 67 372 1.8E-45 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein TP_0074 b2af78122ebc6da42e00fd6382206738 469 SUPERFAMILY SSF53850 68 459 2.4E-57 T 11-10-2018 TP_0074 b2af78122ebc6da42e00fd6382206738 469 Gene3D G3DSA:3.40.190.10 73 411 1.8E-87 T 11-10-2018 TP_0074 b2af78122ebc6da42e00fd6382206738 469 Gene3D G3DSA:3.40.190.10 189 450 1.8E-87 T 11-10-2018 TP_0733 fb4f0cd940e2cb570aec7a5d97f6d59c 219 ProDom PD155205 TRANSMEMBRANE MEMBRANE TP0733 TP0126 20 218 3.0E-83 T 11-10-2018 TP_0733 fb4f0cd940e2cb570aec7a5d97f6d59c 219 Pfam PF13505 Outer membrane protein beta-barrel domain 65 219 1.2E-7 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel TP_0733 fb4f0cd940e2cb570aec7a5d97f6d59c 219 SUPERFAMILY SSF56925 65 219 4.19E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SUPERFAMILY SSF50249 486 586 1.27E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 306 825 9.8E-223 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 PRINTS PR00681 Ribosomal protein S1 signature 340 354 4.8E-36 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 PRINTS PR00681 Ribosomal protein S1 signature 514 535 4.8E-36 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 PRINTS PR00681 Ribosomal protein S1 signature 592 611 4.8E-36 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 PRINTS PR00681 Ribosomal protein S1 signature 322 340 4.8E-36 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 PRINTS PR00681 Ribosomal protein S1 signature 457 477 4.8E-36 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 PRINTS PR00681 Ribosomal protein S1 signature 632 650 4.8E-36 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SUPERFAMILY SSF52540 32 278 2.91E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Pfam PF02224 Cytidylate kinase 37 284 3.9E-88 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SUPERFAMILY SSF50249 567 668 2.14E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SMART SM00316 492 562 6.7E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SMART SM00316 320 381 4.7E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SMART SM00316 577 649 5.8E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SMART SM00316 751 825 1.1E-16 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SMART SM00316 664 736 7.8E-18 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SMART SM00316 397 473 9.7E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SUPERFAMILY SSF50249 310 406 7.86E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Pfam PF00575 S1 RNA binding domain 752 825 3.1E-12 T 11-10-2018 IPR003029 S1 domain GO:0003676 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Pfam PF00575 S1 RNA binding domain 664 736 3.6E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Pfam PF00575 S1 RNA binding domain 493 562 9.3E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Pfam PF00575 S1 RNA binding domain 575 649 6.0E-17 T 11-10-2018 IPR003029 S1 domain GO:0003676 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Pfam PF00575 S1 RNA binding domain 319 371 4.5E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Hamap MF_00238 Cytidylate kinase [cmk]. 35 287 24.638 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Gene3D G3DSA:2.40.50.140 747 835 7.5E-18 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Gene3D G3DSA:2.40.50.140 658 746 1.0E-20 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SUPERFAMILY SSF50249 398 487 2.81E-7 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Gene3D G3DSA:2.40.50.140 574 657 1.2E-26 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Gene3D G3DSA:2.40.50.140 489 571 9.9E-23 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 Gene3D G3DSA:2.40.50.140 308 389 8.3E-9 T 11-10-2018 TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SUPERFAMILY SSF50249 644 755 8.58E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0279 9c63b4b54bbe535288d9fefafb06983d 863 SUPERFAMILY SSF50249 736 827 6.34E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 Pfam PF04471 Restriction endonuclease 413 465 1.2E-5 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 SUPERFAMILY SSF48452 47 106 4.64E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 Gene3D G3DSA:1.25.40.10 113 249 5.4E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 SUPERFAMILY SSF48452 117 281 1.26E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 Gene3D G3DSA:1.25.40.10 250 347 7.9E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 Pfam PF13432 Tetratricopeptide repeat 55 100 7.9E-4 T 11-10-2018 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 Pfam PF13432 Tetratricopeptide repeat 190 245 1.6E-5 T 11-10-2018 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 Pfam PF13432 Tetratricopeptide repeat 124 180 9.5E-5 T 11-10-2018 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 Gene3D G3DSA:1.25.40.10 51 112 6.7E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 SMART SM00028 151 184 1.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 SMART SM00028 292 325 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 SMART SM00028 253 286 17.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 SMART SM00028 44 77 340.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 SMART SM00028 117 150 7.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 SMART SM00028 219 252 56.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0471 a2c52af8ea8bedb26ce9e1f33c2f1ca3 469 SMART SM00028 185 218 17.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0903 897768d4ee8915b5973128b76095db54 532 Gene3D G3DSA:3.40.50.720 8 104 2.2E-17 T 11-10-2018 TP_0903 897768d4ee8915b5973128b76095db54 532 Gene3D G3DSA:3.90.190.20 395 529 7.8E-31 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0903 897768d4ee8915b5973128b76095db54 532 Gene3D G3DSA:3.40.1190.10 107 342 7.3E-31 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0903 897768d4ee8915b5973128b76095db54 532 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 528 1.5E-167 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TP_0903 897768d4ee8915b5973128b76095db54 532 SUPERFAMILY SSF53623 112 331 1.57E-26 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0903 897768d4ee8915b5973128b76095db54 532 Pfam PF02875 Mur ligase family, glutamate ligase domain 392 460 3.4E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TP_0903 897768d4ee8915b5973128b76095db54 532 Pfam PF08245 Mur ligase middle domain 122 270 2.3E-14 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TP_0903 897768d4ee8915b5973128b76095db54 532 SUPERFAMILY SSF53244 390 528 6.87E-27 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0903 897768d4ee8915b5973128b76095db54 532 SUPERFAMILY SSF51984 8 99 1.29E-9 T 11-10-2018 TP_0474 8a3a273c6e7d684e8dcafedcf08ee3c9 245 Pfam PF01709 Transcriptional regulator 5 237 2.1E-96 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TP_0474 8a3a273c6e7d684e8dcafedcf08ee3c9 245 Gene3D G3DSA:1.10.10.200 1 80 2.0E-36 T 11-10-2018 IPR017856 Integrase-like, N-terminal TP_0474 8a3a273c6e7d684e8dcafedcf08ee3c9 245 SUPERFAMILY SSF75625 3 243 7.98E-94 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TP_0474 8a3a273c6e7d684e8dcafedcf08ee3c9 245 Gene3D G3DSA:3.30.70.980 84 236 2.4E-53 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TP_0474 8a3a273c6e7d684e8dcafedcf08ee3c9 245 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.5E-106 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TP_0474 8a3a273c6e7d684e8dcafedcf08ee3c9 245 Gene3D G3DSA:3.30.70.980 133 205 2.4E-53 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TP_0474 8a3a273c6e7d684e8dcafedcf08ee3c9 245 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.0 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TP_0363 6ec125e93f29427d5f240f72605ea643 812 Gene3D G3DSA:2.30.30.40 661 789 5.0E-39 T 11-10-2018 TP_0363 6ec125e93f29427d5f240f72605ea643 812 Gene3D G3DSA:1.20.120.160 8 147 1.3E-35 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TP_0363 6ec125e93f29427d5f240f72605ea643 812 SMART SM01231 350 475 1.8E-18 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TP_0363 6ec125e93f29427d5f240f72605ea643 812 SUPERFAMILY SSF55874 477 659 3.27E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TP_0363 6ec125e93f29427d5f240f72605ea643 812 Gene3D G3DSA:2.40.50.180 684 748 5.0E-39 T 11-10-2018 TP_0363 6ec125e93f29427d5f240f72605ea643 812 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 351 475 7.1E-31 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TP_0363 6ec125e93f29427d5f240f72605ea643 812 SMART SM00387 520 661 7.2E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TP_0363 6ec125e93f29427d5f240f72605ea643 812 Pfam PF01584 CheW-like domain 665 794 2.7E-27 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TP_0363 6ec125e93f29427d5f240f72605ea643 812 Pfam PF01627 Hpt domain 13 105 6.5E-18 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TP_0363 6ec125e93f29427d5f240f72605ea643 812 SUPERFAMILY SSF55052 196 257 1.07E-10 T 11-10-2018 IPR035891 CheY-binding domain of CheA TP_0363 6ec125e93f29427d5f240f72605ea643 812 Gene3D G3DSA:3.30.565.10 474 660 1.1E-58 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TP_0363 6ec125e93f29427d5f240f72605ea643 812 Pfam PF07194 P2 response regulator binding domain 198 277 3.2E-10 T 11-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 TP_0363 6ec125e93f29427d5f240f72605ea643 812 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 660 1.3E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TP_0363 6ec125e93f29427d5f240f72605ea643 812 SUPERFAMILY SSF47226 12 132 4.84E-32 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TP_0363 6ec125e93f29427d5f240f72605ea643 812 SMART SM00073 11 108 7.7E-29 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TP_0363 6ec125e93f29427d5f240f72605ea643 812 SMART SM00260 653 793 4.9E-42 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TP_0363 6ec125e93f29427d5f240f72605ea643 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 639 2.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TP_0363 6ec125e93f29427d5f240f72605ea643 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 579 2.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TP_0363 6ec125e93f29427d5f240f72605ea643 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 658 2.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TP_0363 6ec125e93f29427d5f240f72605ea643 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 615 2.6E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TP_0363 6ec125e93f29427d5f240f72605ea643 812 SUPERFAMILY SSF50341 660 793 1.2E-31 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TP_0800 fc1c45a8354f704937caf50193fb39c0 490 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 135 1.9E-11 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TP_0800 fc1c45a8354f704937caf50193fb39c0 490 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 181 198 1.9E-11 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TP_0800 fc1c45a8354f704937caf50193fb39c0 490 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 208 221 1.9E-11 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TP_0800 fc1c45a8354f704937caf50193fb39c0 490 Gene3D G3DSA:3.40.710.10 79 365 3.3E-62 T 11-10-2018 TP_0800 fc1c45a8354f704937caf50193fb39c0 490 SUPERFAMILY SSF56601 86 367 4.97E-55 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TP_0800 fc1c45a8354f704937caf50193fb39c0 490 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 94 340 4.2E-43 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 TP_0819 155b32c343484c06244656e81f41a0f7 310 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 8 304 3.2E-109 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 TP_0819 155b32c343484c06244656e81f41a0f7 310 SUPERFAMILY SSF56281 8 306 1.03E-74 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TP_0819 155b32c343484c06244656e81f41a0f7 310 Pfam PF12706 Beta-lactamase superfamily domain 203 272 8.5E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase TP_0819 155b32c343484c06244656e81f41a0f7 310 Gene3D G3DSA:3.60.15.10 5 305 3.6E-85 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TP_0819 155b32c343484c06244656e81f41a0f7 310 Hamap MF_01818 Ribonuclease BN [rbn]. 5 306 35.037 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 TP_0819 155b32c343484c06244656e81f41a0f7 310 SMART SM00849 22 203 5.5E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase TP_0819 155b32c343484c06244656e81f41a0f7 310 Pfam PF00753 Metallo-beta-lactamase superfamily 24 107 2.4E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase TP_0537 3ea61e7dce6f790d3bb570b961d1b76e 249 Pfam PF00121 Triosephosphate isomerase 5 245 2.1E-89 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0537 3ea61e7dce6f790d3bb570b961d1b76e 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0537 3ea61e7dce6f790d3bb570b961d1b76e 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 59.583 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0537 3ea61e7dce6f790d3bb570b961d1b76e 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 3.3E-54 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0537 3ea61e7dce6f790d3bb570b961d1b76e 249 SUPERFAMILY SSF51351 1 247 1.96E-84 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0537 3ea61e7dce6f790d3bb570b961d1b76e 249 Gene3D G3DSA:3.20.20.70 1 249 1.2E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0289 ac57c2f1b2908c2494e7f049502b3a70 534 Gene3D G3DSA:3.40.50.150 266 511 1.9E-26 T 11-10-2018 TP_0289 ac57c2f1b2908c2494e7f049502b3a70 534 Pfam PF13489 Methyltransferase domain 291 476 2.7E-22 T 11-10-2018 TP_0289 ac57c2f1b2908c2494e7f049502b3a70 534 SUPERFAMILY SSF53335 315 501 8.14E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0696 5fe37bbbea5ab6516f7c1f1d10182487 278 Gene3D G3DSA:3.40.50.850 2 255 2.1E-38 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TP_0696 5fe37bbbea5ab6516f7c1f1d10182487 278 SUPERFAMILY SSF52499 1 231 2.75E-16 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TP_0263 399fee4b69ee69d8136193e787156f52 594 Gene3D G3DSA:2.60.120.200 155 373 8.9E-7 T 11-10-2018 TP_0263 399fee4b69ee69d8136193e787156f52 594 SUPERFAMILY SSF49899 191 369 4.95E-12 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily TP_0263 399fee4b69ee69d8136193e787156f52 594 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 218 362 3.9E-7 T 11-10-2018 TP_0263 399fee4b69ee69d8136193e787156f52 594 Gene3D G3DSA:2.60.40.10 487 576 3.3E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold TP_0263 399fee4b69ee69d8136193e787156f52 594 SUPERFAMILY SSF49265 477 567 1.75E-12 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TP_0263 399fee4b69ee69d8136193e787156f52 594 SMART SM00060 487 567 1.6E-6 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 TP_0300 1bdf436c7dfdd112f2ec8ed1d0de4568 516 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0300 1bdf436c7dfdd112f2ec8ed1d0de4568 516 Pfam PF00005 ABC transporter 2 150 1.5E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0300 1bdf436c7dfdd112f2ec8ed1d0de4568 516 SUPERFAMILY SSF52540 1 211 5.08E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0300 1bdf436c7dfdd112f2ec8ed1d0de4568 516 SUPERFAMILY SSF52540 264 502 6.59E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0300 1bdf436c7dfdd112f2ec8ed1d0de4568 516 Gene3D G3DSA:3.40.50.300 269 513 4.1E-24 T 11-10-2018 TP_0300 1bdf436c7dfdd112f2ec8ed1d0de4568 516 Pfam PF00005 ABC transporter 288 448 8.2E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0300 1bdf436c7dfdd112f2ec8ed1d0de4568 516 Gene3D G3DSA:3.40.50.300 1 235 6.7E-39 T 11-10-2018 TP_0219 99157e040169941bfdde3ab92eea8211 715 SUPERFAMILY SSF81606 501 710 7.32E-7 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0219 99157e040169941bfdde3ab92eea8211 715 SMART SM00331 488 711 8.4E-71 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0219 99157e040169941bfdde3ab92eea8211 715 Gene3D G3DSA:3.60.40.10 483 713 4.9E-45 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0219 99157e040169941bfdde3ab92eea8211 715 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 515 710 5.9E-37 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TP_0702 3ffda5c5fb986798ab70b3cb11910a5e 178 Gene3D G3DSA:2.70.70.10 2 142 6.4E-38 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0702 3ffda5c5fb986798ab70b3cb11910a5e 178 Pfam PF01551 Peptidase family M23 43 137 5.2E-27 T 11-10-2018 IPR016047 Peptidase M23 TP_0702 3ffda5c5fb986798ab70b3cb11910a5e 178 SUPERFAMILY SSF51261 13 140 1.46E-40 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 6.2E-38 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 SUPERFAMILY SSF64518 1 285 1.16E-79 T 11-10-2018 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 PRINTS PR00207 Flagellin signature 109 132 1.7E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 PRINTS PR00207 Flagellin signature 74 93 1.7E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 PRINTS PR00207 Flagellin signature 35 52 1.7E-23 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 Gene3D G3DSA:1.20.58.1830 250 284 5.4E-38 T 11-10-2018 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 Gene3D G3DSA:1.20.58.1830 3 31 4.2E-56 T 11-10-2018 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 Gene3D G3DSA:1.20.1330.10 43 177 4.2E-56 T 11-10-2018 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 Gene3D G3DSA:1.20.1330.10 193 244 5.4E-38 T 11-10-2018 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 Gene3D G3DSA:2.170.280.10 181 192 5.4E-38 T 11-10-2018 TP_0870 658c1e1f1ac64da3c71ad57ed894559a 285 Pfam PF00700 Bacterial flagellin C-terminal helical region 200 284 3.7E-23 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 15 417 35.935 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 17 337 2.7E-124 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 ProSitePatterns PS01135 FtsZ protein signature 2. 103 124 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 PRINTS PR00423 Cell division protein FtsZ signature 195 217 2.4E-43 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 PRINTS PR00423 Cell division protein FtsZ signature 132 153 2.4E-43 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 PRINTS PR00423 Cell division protein FtsZ signature 104 124 2.4E-43 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 PRINTS PR00423 Cell division protein FtsZ signature 218 239 2.4E-43 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 SUPERFAMILY SSF55307 210 324 8.93E-36 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 Pfam PF12327 FtsZ family, C-terminal domain 228 322 1.2E-28 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 SUPERFAMILY SSF52490 19 214 4.58E-68 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 20 179 7.6E-40 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 Gene3D G3DSA:3.40.50.1440 18 322 7.0E-111 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 ProSitePatterns PS01134 FtsZ protein signature 1. 50 84 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 SMART SM00864 19 211 3.9E-108 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TP_0390 dc1c0fbfbd9e12bb206b419e85baacf0 418 SMART SM00865 213 331 1.3E-41 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 TP_0099 633dccf3b8da82380c7af62f6bcf2e65 251 SUPERFAMILY SSF53633 2 250 7.33E-31 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TP_0099 633dccf3b8da82380c7af62f6bcf2e65 251 Gene3D G3DSA:3.40.1160.10 3 251 1.2E-40 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TP_0099 633dccf3b8da82380c7af62f6bcf2e65 251 PIRSF PIRSF005650 1 251 1.1E-52 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 TP_0099 633dccf3b8da82380c7af62f6bcf2e65 251 Pfam PF00696 Amino acid kinase family 1 227 3.8E-25 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TP_0100 a2e00553809ae8384a4aa8225694af15 200 Pfam PF08534 Redoxin 71 184 1.0E-20 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 TP_0100 a2e00553809ae8384a4aa8225694af15 200 Gene3D G3DSA:3.40.30.10 63 196 2.6E-38 T 11-10-2018 TP_0100 a2e00553809ae8384a4aa8225694af15 200 ProSitePatterns PS00194 Thioredoxin family active site. 89 107 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TP_0100 a2e00553809ae8384a4aa8225694af15 200 SUPERFAMILY SSF52833 66 198 1.63E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TP_0421 34dd6ac5b565b6ece7494ca7fd7e75a9 683 Pfam PF13414 TPR repeat 51 88 1.9E-6 T 11-10-2018 TP_0421 34dd6ac5b565b6ece7494ca7fd7e75a9 683 SUPERFAMILY SSF101898 148 398 5.49E-28 T 11-10-2018 TP_0421 34dd6ac5b565b6ece7494ca7fd7e75a9 683 Gene3D G3DSA:2.120.10.30 90 230 3.2E-9 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TP_0421 34dd6ac5b565b6ece7494ca7fd7e75a9 683 Gene3D G3DSA:2.120.10.30 231 415 3.3E-26 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TP_0421 34dd6ac5b565b6ece7494ca7fd7e75a9 683 SUPERFAMILY SSF48452 40 105 1.52E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0737 e487baad351c0f42322748ba0f7f80f2 436 Pfam PF01547 Bacterial extracellular solute-binding protein 54 342 1.8E-31 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein TP_0737 e487baad351c0f42322748ba0f7f80f2 436 Gene3D G3DSA:3.40.190.10 146 387 3.7E-45 T 11-10-2018 TP_0737 e487baad351c0f42322748ba0f7f80f2 436 SUPERFAMILY SSF53850 27 366 5.19E-35 T 11-10-2018 TP_0737 e487baad351c0f42322748ba0f7f80f2 436 Gene3D G3DSA:3.40.190.10 61 366 3.7E-45 T 11-10-2018 TP_0053 c1e362c3f5f346a9c44563f178ba72e0 351 PIRSF PIRSF000355 4 351 5.7E-129 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_0053 c1e362c3f5f346a9c44563f178ba72e0 351 SUPERFAMILY SSF47240 23 348 3.59E-93 T 11-10-2018 IPR009078 Ferritin-like superfamily TP_0053 c1e362c3f5f346a9c44563f178ba72e0 351 Pfam PF00268 Ribonucleotide reductase, small chain 36 312 4.4E-85 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_0053 c1e362c3f5f346a9c44563f178ba72e0 351 Gene3D G3DSA:1.10.620.20 12 324 5.7E-98 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 TP_0053 c1e362c3f5f346a9c44563f178ba72e0 351 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 123 139 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 Gene3D G3DSA:3.30.300.180 5 84 8.9E-12 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 370 438 6.4E-29 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 SUPERFAMILY SSF52540 118 337 1.63E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 152 172 1.1E-42 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 216 230 1.1E-42 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 250 277 1.1E-42 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 183 197 1.1E-42 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 419 438 1.1E-42 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 10 458 1.9E-149 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 Gene3D G3DSA:3.40.50.300 118 284 4.9E-47 T 11-10-2018 TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 SMART SM00382 151 281 3.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 SUPERFAMILY SSF48295 356 461 1.1E-33 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 Pfam PF00308 Bacterial dnaA protein 119 342 2.2E-78 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 ProSitePatterns PS01008 DnaA protein signature. 419 438 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 SMART SM00760 369 438 3.1E-39 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 Pfam PF11638 DnaA N-terminal domain 9 65 1.1E-6 T 11-10-2018 IPR024633 DnaA N-terminal domain TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 Gene3D G3DSA:1.10.1750.10 362 464 1.9E-32 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 7 460 30.216 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TP_0001 9137eaa2b913df36afb29c8af2cca1e6 464 Gene3D G3DSA:1.10.8.60 286 361 3.8E-15 T 11-10-2018 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 SUPERFAMILY SSF52156 606 736 1.96E-34 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 246 829 3.5E-242 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 SUPERFAMILY SSF52540 322 499 4.16E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 Gene3D G3DSA:2.40.30.10 731 828 1.9E-29 T 11-10-2018 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 Gene3D G3DSA:3.40.50.10050 623 730 5.7E-37 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 Pfam PF00009 Elongation factor Tu GTP binding domain 333 489 5.2E-31 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 Pfam PF11987 Translation-initiation factor 2 614 719 1.6E-35 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 ProSitePatterns PS01176 Initiation factor 2 signature. 780 802 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 Gene3D G3DSA:2.40.30.10 500 617 7.5E-36 T 11-10-2018 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 331 483 1.8E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 253 303 3.7E-16 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 SUPERFAMILY SSF50447 731 827 9.56E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 827 16.336 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 Gene3D G3DSA:3.40.50.300 326 499 3.4E-68 T 11-10-2018 TP_0891 e23d6d0d1a0866f7a6fe6b77cfcaf726 842 SUPERFAMILY SSF50447 503 583 2.14E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 SMART SM00937 79 188 7.2E-42 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 359 37.347 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 238 254 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 Gene3D G3DSA:3.30.70.1660 124 351 1.8E-90 T 11-10-2018 TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 Pfam PF00472 RF-1 domain 222 331 1.4E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 Pfam PF03462 PCRF domain 25 212 2.9E-51 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 SUPERFAMILY SSF75620 25 357 5.89E-119 T 11-10-2018 TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 Gene3D G3DSA:1.20.58.410 8 109 8.3E-19 T 11-10-2018 TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 Gene3D G3DSA:3.30.160.20 219 314 1.8E-90 T 11-10-2018 TP_0576 dd157ba042e169ff4f89c5aba7f205ea 368 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 12 356 1.5E-143 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 TP_0636 0c44b23404ae9221e24d3747b66b7900 256 SUPERFAMILY SSF57863 89 243 2.88E-12 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger TP_0636 0c44b23404ae9221e24d3747b66b7900 256 Pfam PF02565 Recombination protein O C terminal 118 249 6.0E-10 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TP_0210 1ed491e11b3f850034ad92bafbf47e61 121 PIRSF PIRSF002134 1 121 8.0E-41 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0210 1ed491e11b3f850034ad92bafbf47e61 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0210 1ed491e11b3f850034ad92bafbf47e61 121 SUPERFAMILY SSF46946 2 120 1.45E-41 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TP_0210 1ed491e11b3f850034ad92bafbf47e61 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.9E-28 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0210 1ed491e11b3f850034ad92bafbf47e61 121 Gene3D G3DSA:4.10.910.10 72 121 2.2E-28 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0210 1ed491e11b3f850034ad92bafbf47e61 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 24.85 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0210 1ed491e11b3f850034ad92bafbf47e61 121 Gene3D G3DSA:1.10.8.50 1 71 7.8E-25 T 11-10-2018 TP_0210 1ed491e11b3f850034ad92bafbf47e61 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.5E-51 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 Pfam PF13176 Tetratricopeptide repeat 323 352 0.025 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 Gene3D G3DSA:1.25.40.10 281 476 3.3E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 SMART SM00028 318 351 0.76 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 SMART SM00028 284 317 6.1E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 SMART SM00028 182 215 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 SMART SM00028 148 181 0.53 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 SMART SM00028 216 249 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 SMART SM00028 250 283 3.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 Pfam PF13432 Tetratricopeptide repeat 255 316 3.8E-8 T 11-10-2018 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 Pfam PF13432 Tetratricopeptide repeat 154 213 5.5E-11 T 11-10-2018 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 Gene3D G3DSA:1.25.40.10 40 113 6.2E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 SUPERFAMILY SSF48452 54 398 1.96E-40 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 Gene3D G3DSA:1.25.40.10 234 280 6.8E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0954 c7939899602b4aef5b8cad775a7fe18e 478 Gene3D G3DSA:1.25.40.10 114 233 5.9E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0231 1494b607cedc112682ed791d8174347c 216 Pfam PF00849 RNA pseudouridylate synthase 12 152 2.0E-27 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0231 1494b607cedc112682ed791d8174347c 216 Gene3D G3DSA:3.30.2350.10 1 205 6.7E-53 T 11-10-2018 TP_0231 1494b607cedc112682ed791d8174347c 216 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 48 62 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0231 1494b607cedc112682ed791d8174347c 216 SUPERFAMILY SSF55120 3 212 1.12E-53 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 598 0.0 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 Gene3D G3DSA:1.20.1270.10 518 601 2.7E-26 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 Gene3D G3DSA:3.30.420.40 177 360 5.0E-152 T 11-10-2018 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 Gene3D G3DSA:2.60.34.10 378 517 5.0E-65 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 Gene3D G3DSA:3.30.420.40 5 373 5.0E-152 T 11-10-2018 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 629 37.156 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 SUPERFAMILY SSF100934 501 601 9.29E-19 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 PRINTS PR00301 70kDa heat shock protein signature 382 401 4.2E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 PRINTS PR00301 70kDa heat shock protein signature 135 155 4.2E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 PRINTS PR00301 70kDa heat shock protein signature 359 379 4.2E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 PRINTS PR00301 70kDa heat shock protein signature 196 206 4.2E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.2E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.2E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.2E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 PRINTS PR00301 70kDa heat shock protein signature 328 344 4.2E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 PRINTS PR00301 70kDa heat shock protein signature 463 479 4.2E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 SUPERFAMILY SSF100920 378 534 6.02E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 Pfam PF00012 Hsp70 protein 4 598 2.3E-262 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 SUPERFAMILY SSF53067 185 376 2.72E-66 T 11-10-2018 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 SUPERFAMILY SSF53067 1 180 2.07E-60 T 11-10-2018 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TP_0216 4158bd0d957fcd575c35e25bf19ee8ad 635 Gene3D G3DSA:3.90.640.10 223 310 5.0E-152 T 11-10-2018 TP_0957 e06d577f245afb2e1bd64364e9ebcd14 342 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 319 2.3E-74 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TP_0957 e06d577f245afb2e1bd64364e9ebcd14 342 Gene3D G3DSA:3.40.190.170 15 342 3.0E-62 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TP_0890 4600796c7194aa88881f2d9c37eb0587 126 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 117 8.3E-27 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TP_0890 4600796c7194aa88881f2d9c37eb0587 126 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 TP_0890 4600796c7194aa88881f2d9c37eb0587 126 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 113 24.168 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TP_0890 4600796c7194aa88881f2d9c37eb0587 126 Gene3D G3DSA:3.30.300.20 3 107 2.8E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TP_0890 4600796c7194aa88881f2d9c37eb0587 126 SUPERFAMILY SSF89919 5 116 6.54E-25 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily TP_0890 4600796c7194aa88881f2d9c37eb0587 126 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 16 100 3.0E-44 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TP_0890 4600796c7194aa88881f2d9c37eb0587 126 Pfam PF02033 Ribosome-binding factor A 8 109 1.3E-23 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 SUPERFAMILY SSF48452 243 313 2.44E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 Pfam PF04471 Restriction endonuclease 374 440 1.3E-8 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 Pfam PF14559 Tetratricopeptide repeat 177 222 4.1E-6 T 11-10-2018 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 SUPERFAMILY SSF48452 54 261 1.14E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 SMART SM00028 129 162 0.98 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 SMART SM00028 269 302 26.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 SMART SM00028 163 196 2.5E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 SMART SM00028 231 264 49.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 SMART SM00028 56 89 93.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0915 48c8140c26ab6b9d47cfe7ba02e5bb49 444 Gene3D G3DSA:1.25.40.10 23 316 7.6E-37 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0079 7dc8234904f0a029408bfebd57e95127 740 SUPERFAMILY SSF54665 14 120 2.75E-18 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily TP_0079 7dc8234904f0a029408bfebd57e95127 740 SUPERFAMILY SSF56003 147 731 1.7E-103 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TP_0079 7dc8234904f0a029408bfebd57e95127 740 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 144 629 1.4E-32 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TP_0079 7dc8234904f0a029408bfebd57e95127 740 SMART SM01008 18 125 5.0E-10 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TP_0079 7dc8234904f0a029408bfebd57e95127 740 Gene3D G3DSA:3.30.365.10 14 731 2.7E-57 T 11-10-2018 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 SUPERFAMILY SSF53795 238 606 3.43E-148 T 11-10-2018 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 262 270 - T 11-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 SUPERFAMILY SSF68923 6 237 4.39E-99 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 2 606 49.675 T 11-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 PIRSF PIRSF001348 1 609 8.0E-298 T 11-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 Gene3D G3DSA:3.90.228.20 238 604 3.0E-261 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 14 234 6.8E-103 T 11-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 Gene3D G3DSA:3.40.449.10 14 237 3.0E-261 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 238 605 1.0E-165 T 11-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TP_0122 74d5fc92933361dfe7ed114239cc3231 618 Gene3D G3DSA:2.170.8.10 49 398 3.0E-261 T 11-10-2018 TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 1 249 4.4E-122 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 SUPERFAMILY SSF53254 1 224 2.22E-71 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 PIRSF PIRSF000709 2 110 4.8E-8 T 11-10-2018 TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 PIRSF PIRSF000709 147 231 0.23 T 11-10-2018 TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 148 213 8.8E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 122 3.9E-30 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 SMART SM00855 2 192 1.5E-26 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 Gene3D G3DSA:3.40.50.1240 1 251 1.5E-81 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 TP_0168 aeb5af94484c5ba14da2a2cd0397e4b5 251 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 231 42.808 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 TP_0538 9a600b1a4c43259cc784a42304031723 419 Gene3D G3DSA:3.40.50.1260 193 409 1.6E-140 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 Gene3D G3DSA:3.40.50.1260 7 417 1.6E-140 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 419 38.735 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 Pfam PF00162 Phosphoglycerate kinase 7 409 3.3E-141 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.8E-85 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.8E-85 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PRINTS PR00477 Phosphoglycerate kinase family signature 160 182 5.8E-85 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PRINTS PR00477 Phosphoglycerate kinase family signature 191 213 5.8E-85 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PRINTS PR00477 Phosphoglycerate kinase family signature 128 143 5.8E-85 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PRINTS PR00477 Phosphoglycerate kinase family signature 336 361 5.8E-85 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PRINTS PR00477 Phosphoglycerate kinase family signature 214 233 5.8E-85 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PRINTS PR00477 Phosphoglycerate kinase family signature 372 383 5.8E-85 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PRINTS PR00477 Phosphoglycerate kinase family signature 395 412 5.8E-85 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 SUPERFAMILY SSF53748 4 418 3.89E-142 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0538 9a600b1a4c43259cc784a42304031723 419 PIRSF PIRSF000724 1 419 1.6E-137 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TP_0095 c1a9a187701265857c985168433ca3e0 648 Pfam PF13174 Tetratricopeptide repeat 534 561 0.091 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 Pfam PF13174 Tetratricopeptide repeat 147 177 0.014 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SMART SM00028 76 109 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SMART SM00028 325 358 0.078 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SMART SM00028 428 461 42.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SMART SM00028 219 252 8.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SMART SM00028 144 177 1.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SMART SM00028 597 630 83.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SMART SM00028 110 143 34.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SMART SM00028 529 562 410.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 Gene3D G3DSA:1.25.40.10 396 524 2.8E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 Gene3D G3DSA:1.25.40.10 300 395 4.6E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SUPERFAMILY SSF48452 75 398 6.21E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 Pfam PF13176 Tetratricopeptide repeat 431 461 0.025 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SUPERFAMILY SSF48452 535 643 5.43E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 Gene3D G3DSA:1.25.40.10 171 299 9.3E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 Gene3D G3DSA:1.25.40.10 532 647 2.4E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0095 c1a9a187701265857c985168433ca3e0 648 SUPERFAMILY SSF48452 426 518 1.03E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 59 8.8E-20 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 16.89 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 Pfam PF01165 Ribosomal protein S21 4 56 5.9E-20 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 Gene3D G3DSA:1.20.5.1150 16 59 3.9E-12 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.1E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.1E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.1E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.1E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 43 2.0E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0758 360ff6da9c90453ea5f1596ee1e4a6cd 69 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0557 91a7f6d77be7a0249e8cac7f83d33298 237 Pfam PF06226 Protein of unknown function (DUF1007) 12 233 8.0E-50 T 11-10-2018 IPR010412 Protein of unknown function DUF1007 TP_0557 91a7f6d77be7a0249e8cac7f83d33298 237 PIRSF PIRSF008159 1 235 1.1E-70 T 11-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, TP_0090 8f4abd25bba5434579713935140bd8a7 354 SUPERFAMILY SSF56176 13 155 1.16E-28 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TP_0090 8f4abd25bba5434579713935140bd8a7 354 Gene3D G3DSA:3.30.43.10 4 82 2.8E-20 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TP_0090 8f4abd25bba5434579713935140bd8a7 354 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 354 67.023 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0090 8f4abd25bba5434579713935140bd8a7 354 SUPERFAMILY SSF56194 240 346 1.44E-31 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0090 8f4abd25bba5434579713935140bd8a7 354 Gene3D G3DSA:3.90.78.10 258 352 7.1E-26 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0090 8f4abd25bba5434579713935140bd8a7 354 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 240 339 2.6E-22 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0090 8f4abd25bba5434579713935140bd8a7 354 Pfam PF01565 FAD binding domain 33 153 5.2E-16 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TP_0736 9918e2a0336121635802c4dcf1538c17 280 Gene3D G3DSA:2.40.30.10 1 92 2.6E-20 T 11-10-2018 TP_0736 9918e2a0336121635802c4dcf1538c17 280 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 213 250 1.6E-13 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain TP_0736 9918e2a0336121635802c4dcf1538c17 280 SUPERFAMILY SSF63380 3 93 2.31E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TP_0736 9918e2a0336121635802c4dcf1538c17 280 Pfam PF00175 Oxidoreductase NAD-binding domain 105 198 1.3E-6 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TP_0736 9918e2a0336121635802c4dcf1538c17 280 PIRSF PIRSF006816 1 255 1.3E-67 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 TP_0736 9918e2a0336121635802c4dcf1538c17 280 Gene3D G3DSA:3.40.50.80 100 204 6.7E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TP_0736 9918e2a0336121635802c4dcf1538c17 280 SUPERFAMILY SSF52343 89 249 3.01E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TP_0103 8e6339cfade28d1b1b5b6890d0413c09 607 SMART SM00490 388 471 2.7E-23 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0103 8e6339cfade28d1b1b5b6890d0413c09 607 Gene3D G3DSA:3.40.50.300 222 343 2.3E-22 T 11-10-2018 TP_0103 8e6339cfade28d1b1b5b6890d0413c09 607 SUPERFAMILY SSF52540 147 486 7.96E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0103 8e6339cfade28d1b1b5b6890d0413c09 607 SMART SM00487 52 357 6.9E-16 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TP_0103 8e6339cfade28d1b1b5b6890d0413c09 607 Gene3D G3DSA:3.40.50.300 349 548 2.5E-44 T 11-10-2018 TP_0103 8e6339cfade28d1b1b5b6890d0413c09 607 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 280 289 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site TP_0103 8e6339cfade28d1b1b5b6890d0413c09 607 Gene3D G3DSA:3.40.50.300 108 215 9.1E-21 T 11-10-2018 TP_0103 8e6339cfade28d1b1b5b6890d0413c09 607 Pfam PF00271 Helicase conserved C-terminal domain 376 470 2.3E-15 T 11-10-2018 IPR001650 Helicase, C-terminal TP_0789 efb45912e123987aeac6487def921be8 258 Gene3D G3DSA:2.50.20.10 21 255 2.6E-51 T 11-10-2018 TP_0789 efb45912e123987aeac6487def921be8 258 Pfam PF17131 Outer membrane lipoprotein-sorting protein 70 254 2.0E-49 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TP_0199 698417ca27082b5b0fcfe8ea3167188e 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0199 698417ca27082b5b0fcfe8ea3167188e 122 SUPERFAMILY SSF50193 1 122 2.62E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TP_0199 698417ca27082b5b0fcfe8ea3167188e 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.1E-57 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 TP_0199 698417ca27082b5b0fcfe8ea3167188e 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.1E-53 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TP_0199 698417ca27082b5b0fcfe8ea3167188e 122 Gene3D G3DSA:2.40.150.20 1 122 9.5E-52 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TP_0199 698417ca27082b5b0fcfe8ea3167188e 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.013 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TP_0199 698417ca27082b5b0fcfe8ea3167188e 122 SMART SM01374 1 122 2.9E-81 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TP_0203 af6f1962b4f02ab12fb0b820f4235b40 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 29.78 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0203 af6f1962b4f02ab12fb0b820f4235b40 132 Gene3D G3DSA:3.30.1490.10 75 132 3.2E-23 T 11-10-2018 TP_0203 af6f1962b4f02ab12fb0b820f4235b40 132 SUPERFAMILY SSF56047 4 132 2.75E-45 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0203 af6f1962b4f02ab12fb0b820f4235b40 132 Pfam PF00410 Ribosomal protein S8 5 132 4.1E-49 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0203 af6f1962b4f02ab12fb0b820f4235b40 132 Gene3D G3DSA:3.30.1370.30 3 74 3.5E-29 T 11-10-2018 TP_0419 0165f1ffe5a2e63f35c58127bdcdb888 187 Pfam PF01975 Survival protein SurE 3 169 2.7E-48 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TP_0419 0165f1ffe5a2e63f35c58127bdcdb888 187 Gene3D G3DSA:3.40.1210.10 1 184 8.0E-59 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TP_0419 0165f1ffe5a2e63f35c58127bdcdb888 187 SUPERFAMILY SSF64167 1 168 2.88E-51 T 11-10-2018 TP_0419 0165f1ffe5a2e63f35c58127bdcdb888 187 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 167 1.7E-44 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TP_0087 c8dbae7065a95a01defd107060274cc9 179 Pfam PF02643 Uncharacterized ACR, COG1430 56 156 9.1E-27 T 11-10-2018 IPR003795 Protein of unknown function DUF192 TP_0087 c8dbae7065a95a01defd107060274cc9 179 Gene3D G3DSA:2.60.120.1140 35 166 4.3E-32 T 11-10-2018 IPR038695 Saro_0823-like superfamily TP_0594 0357f335bc27777819ca02559570262c 202 Gene3D G3DSA:2.40.128.520 61 186 1.0E-6 T 11-10-2018 TP_0594 0357f335bc27777819ca02559570262c 202 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 65 187 3.6E-23 T 11-10-2018 IPR019223 Domain of unknown function DUF2147 TP_0092 aebd64dc6d28e09d16be5408ed608fed 162 Pfam PF04542 Sigma-70 region 2 1 68 1.5E-9 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TP_0092 aebd64dc6d28e09d16be5408ed608fed 162 Pfam PF08281 Sigma-70, region 4 98 150 1.7E-16 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TP_0092 aebd64dc6d28e09d16be5408ed608fed 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 154 2.5E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TP_0092 aebd64dc6d28e09d16be5408ed608fed 162 Gene3D G3DSA:1.10.10.10 91 156 1.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0092 aebd64dc6d28e09d16be5408ed608fed 162 SUPERFAMILY SSF88946 1 84 4.32E-11 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TP_0092 aebd64dc6d28e09d16be5408ed608fed 162 SUPERFAMILY SSF88659 92 155 4.3E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TP_0092 aebd64dc6d28e09d16be5408ed608fed 162 Gene3D G3DSA:1.10.1740.10 1 70 1.7E-9 T 11-10-2018 TP_0543 1353a85d776062ea167a4a788f056ddb 227 SMART SM00278 73 92 0.5 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TP_0543 1353a85d776062ea167a4a788f056ddb 227 SMART SM00278 108 127 0.014 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TP_0543 1353a85d776062ea167a4a788f056ddb 227 Gene3D G3DSA:1.10.150.20 67 138 1.9E-22 T 11-10-2018 TP_0543 1353a85d776062ea167a4a788f056ddb 227 Gene3D G3DSA:2.40.50.140 1 65 2.6E-14 T 11-10-2018 TP_0543 1353a85d776062ea167a4a788f056ddb 227 SUPERFAMILY SSF47781 65 132 8.34E-18 T 11-10-2018 IPR010994 RuvA domain 2-like TP_0543 1353a85d776062ea167a4a788f056ddb 227 SUPERFAMILY SSF50249 1 63 3.94E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0543 1353a85d776062ea167a4a788f056ddb 227 Pfam PF14520 Helix-hairpin-helix domain 72 129 7.0E-16 T 11-10-2018 TP_0543 1353a85d776062ea167a4a788f056ddb 227 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 215 27.84 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TP_0543 1353a85d776062ea167a4a788f056ddb 227 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 187 5.2E-41 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TP_0543 1353a85d776062ea167a4a788f056ddb 227 Pfam PF01330 RuvA N terminal domain 1 62 1.0E-12 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 TP_0902 9114f708e1ee0f72fddb0e1a387e3190 293 Pfam PF12697 Alpha/beta hydrolase family 65 284 8.1E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TP_0902 9114f708e1ee0f72fddb0e1a387e3190 293 SUPERFAMILY SSF53474 60 292 3.38E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TP_0902 9114f708e1ee0f72fddb0e1a387e3190 293 PIRSF PIRSF017388 47 293 2.1E-101 T 11-10-2018 IPR012354 Esterase/lipase GO:0052689 TP_0902 9114f708e1ee0f72fddb0e1a387e3190 293 Gene3D G3DSA:3.40.50.1820 52 293 4.5E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TP_1016 6f68a44127586ee4696e80df93bcb0c2 361 Gene3D G3DSA:1.10.4030.30 36 300 7.2E-24 T 11-10-2018 TP_1016 6f68a44127586ee4696e80df93bcb0c2 361 Gene3D G3DSA:3.10.50.40 188 293 7.2E-24 T 11-10-2018 TP_1016 6f68a44127586ee4696e80df93bcb0c2 361 Pfam PF13145 PPIC-type PPIASE domain 169 301 1.7E-9 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TP_1016 6f68a44127586ee4696e80df93bcb0c2 361 Pfam PF13623 SurA N-terminal domain 51 101 4.0E-7 T 11-10-2018 TP_1016 6f68a44127586ee4696e80df93bcb0c2 361 SUPERFAMILY SSF109998 28 211 1.96E-19 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily TP_1009 784237f7b023b17ff0a698a21cf27c60 356 SUPERFAMILY SSF51735 3 192 1.97E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_1009 784237f7b023b17ff0a698a21cf27c60 356 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 352 31.763 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 Gene3D G3DSA:3.40.50.720 1 202 7.2E-51 T 11-10-2018 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 175 2.2E-48 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 SUPERFAMILY SSF48179 195 355 2.89E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 1.5E-34 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 259 276 1.5E-34 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 218 242 1.5E-34 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 1.5E-34 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 188 212 1.5E-34 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 148 168 1.5E-34 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 PIRSF PIRSF000114 1 355 3.2E-89 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 203 223 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 195 349 9.4E-40 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TP_1009 784237f7b023b17ff0a698a21cf27c60 356 Gene3D G3DSA:1.10.1040.10 204 355 5.1E-36 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TP_0114 ced32a3deb6432ad13247e594e74ad3a 331 Gene3D G3DSA:3.30.479.30 62 168 2.5E-9 T 11-10-2018 TP_0114 ced32a3deb6432ad13247e594e74ad3a 331 PIRSF PIRSF005651 4 331 8.9E-104 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TP_0114 ced32a3deb6432ad13247e594e74ad3a 331 Pfam PF01145 SPFH domain / Band 7 family 38 240 7.4E-21 T 11-10-2018 IPR001107 Band 7 domain TP_0114 ced32a3deb6432ad13247e594e74ad3a 331 TIGRFAM TIGR01932 hflC: HflC protein 16 329 3.3E-130 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TP_0114 ced32a3deb6432ad13247e594e74ad3a 331 SUPERFAMILY SSF117892 66 235 1.7E-17 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily TP_0114 ced32a3deb6432ad13247e594e74ad3a 331 SMART SM00244 33 202 1.1E-34 T 11-10-2018 IPR001107 Band 7 domain TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 Gene3D G3DSA:2.40.50.140 133 197 5.0E-17 T 11-10-2018 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 426 25.217 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 SMART SM00316 131 199 2.8E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 Gene3D G3DSA:3.30.300.20 198 276 2.2E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 Pfam PF08529 NusA N-terminal domain 9 122 2.1E-16 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 SUPERFAMILY SSF54814 278 342 9.81E-15 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 SUPERFAMILY SSF47794 370 425 3.3E-8 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 Gene3D G3DSA:3.30.300.20 278 443 1.6E-37 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 SUPERFAMILY SSF54814 200 276 1.24E-27 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 SUPERFAMILY SSF69705 9 123 3.01E-21 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 Pfam PF13184 NusA-like KH domain 229 296 3.8E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 8 343 2.4E-124 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 SUPERFAMILY SSF50249 129 198 3.32E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0892 83d2b83929415faf3a57edb2e13e5eeb 485 Gene3D G3DSA:3.30.1480.10 6 122 8.5E-19 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TP_0166 0e33d64f382dbc90f3779ba884d489bf 367 Pfam PF00950 ABC 3 transport family 3 270 1.3E-44 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TP_0166 0e33d64f382dbc90f3779ba884d489bf 367 SUPERFAMILY SSF81345 5 267 8.24E-23 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TP_0592 fcbf287a226781cfa63abca5cbd3a735 500 Gene3D G3DSA:3.30.1380.10 164 286 3.7E-13 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TP_0592 fcbf287a226781cfa63abca5cbd3a735 500 SUPERFAMILY SSF55166 162 293 5.76E-16 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TP_0592 fcbf287a226781cfa63abca5cbd3a735 500 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 211 287 1.6E-15 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 Gene3D G3DSA:1.10.8.60 576 671 1.6E-23 T 11-10-2018 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 SUPERFAMILY SSF54211 682 859 4.55E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0524 3f88f27c2045c9447250bd3765643b4a 881 Gene3D G3DSA:2.30.130.40 87 200 1.9E-20 T 11-10-2018 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 SMART SM00464 93 285 1.5E-65 T 11-10-2018 IPR003111 Lon, substrate-binding domain TP_0524 3f88f27c2045c9447250bd3765643b4a 881 PIRSF PIRSF001174 77 863 2.6E-290 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 682 698 8.2E-52 T 11-10-2018 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 761 780 8.2E-52 T 11-10-2018 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 791 810 8.2E-52 T 11-10-2018 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 440 459 8.2E-52 T 11-10-2018 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 814 832 8.2E-52 T 11-10-2018 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 SUPERFAMILY SSF88697 95 284 4.72E-30 T 11-10-2018 IPR015947 PUA-like superfamily TP_0524 3f88f27c2045c9447250bd3765643b4a 881 SMART SM00382 432 585 2.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0524 3f88f27c2045c9447250bd3765643b4a 881 SUPERFAMILY SSF52540 396 647 1.58E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0524 3f88f27c2045c9447250bd3765643b4a 881 TIGRFAM TIGR00763 lon: endopeptidase La 96 859 4.4E-280 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 764 772 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 Gene3D G3DSA:3.40.50.300 397 575 1.6E-62 T 11-10-2018 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 Hamap MF_01973 Lon protease [lon]. 94 860 64.419 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 436 573 4.5E-19 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 94 284 1.1E-33 T 11-10-2018 IPR003111 Lon, substrate-binding domain TP_0524 3f88f27c2045c9447250bd3765643b4a 881 Gene3D G3DSA:1.20.58.1480 205 327 1.6E-33 T 11-10-2018 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 659 859 2.6E-79 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 TP_0524 3f88f27c2045c9447250bd3765643b4a 881 Gene3D G3DSA:3.30.230.10 673 869 3.6E-74 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_0924 9bb3b0086e89a198520089be5cfe366e 778 SUPERFAMILY SSF53098 328 470 9.48E-42 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TP_0924 9bb3b0086e89a198520089be5cfe366e 778 Gene3D G3DSA:2.40.50.140 630 719 1.1E-23 T 11-10-2018 TP_0924 9bb3b0086e89a198520089be5cfe366e 778 SUPERFAMILY SSF50249 630 722 9.7E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0924 9bb3b0086e89a198520089be5cfe366e 778 SUPERFAMILY SSF47781 563 627 7.23E-11 T 11-10-2018 IPR010994 RuvA domain 2-like TP_0924 9bb3b0086e89a198520089be5cfe366e 778 Pfam PF00575 S1 RNA binding domain 643 715 3.5E-17 T 11-10-2018 IPR003029 S1 domain GO:0003676 TP_0924 9bb3b0086e89a198520089be5cfe366e 778 Pfam PF12836 Helix-hairpin-helix motif 493 556 1.6E-27 T 11-10-2018 TP_0924 9bb3b0086e89a198520089be5cfe366e 778 SMART SM00732 332 426 3.5E-26 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 TP_0924 9bb3b0086e89a198520089be5cfe366e 778 SUPERFAMILY SSF47781 472 560 6.23E-26 T 11-10-2018 IPR010994 RuvA domain 2-like TP_0924 9bb3b0086e89a198520089be5cfe366e 778 Gene3D G3DSA:1.10.10.650 12 122 1.6E-26 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily TP_0924 9bb3b0086e89a198520089be5cfe366e 778 Gene3D G3DSA:1.10.3500.10 125 500 5.8E-128 T 11-10-2018 IPR023323 Tex-like domain superfamily TP_0924 9bb3b0086e89a198520089be5cfe366e 778 SUPERFAMILY SSF158832 17 326 6.8E-81 T 11-10-2018 TP_0924 9bb3b0086e89a198520089be5cfe366e 778 Gene3D G3DSA:3.30.420.140 331 453 5.8E-128 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 TP_0924 9bb3b0086e89a198520089be5cfe366e 778 Pfam PF16921 Tex protein YqgF-like domain 333 453 7.9E-42 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain TP_0924 9bb3b0086e89a198520089be5cfe366e 778 Pfam PF09371 Tex-like protein N-terminal domain 22 210 1.7E-48 T 11-10-2018 IPR018974 Tex-like protein, N-terminal TP_0924 9bb3b0086e89a198520089be5cfe366e 778 Gene3D G3DSA:1.10.150.310 501 625 1.3E-39 T 11-10-2018 TP_0924 9bb3b0086e89a198520089be5cfe366e 778 SMART SM00316 644 715 7.0E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0972 8884fe52bbb00cfd0575b557d0b92230 448 Pfam PF03239 Iron permease FTR1 family 15 361 6.4E-84 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 TP_0483 3fc52fb56c01ebe2570bf8340486f855 374 SUPERFAMILY SSF49265 25 99 1.39E-5 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TP_0483 3fc52fb56c01ebe2570bf8340486f855 374 Gene3D G3DSA:2.60.40.10 21 110 4.6E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold TP_0485 d0fe09a2e5f3855770192901a3e7fce3 614 SMART SM00304 309 361 4.5E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TP_0485 d0fe09a2e5f3855770192901a3e7fce3 614 Gene3D G3DSA:3.30.70.1230 379 583 1.5E-66 T 11-10-2018 IPR029787 Nucleotide cyclase TP_0485 d0fe09a2e5f3855770192901a3e7fce3 614 Gene3D G3DSA:1.20.1480.50 275 366 1.5E-11 T 11-10-2018 TP_0485 d0fe09a2e5f3855770192901a3e7fce3 614 SUPERFAMILY SSF55073 385 573 1.07E-57 T 11-10-2018 IPR029787 Nucleotide cyclase TP_0485 d0fe09a2e5f3855770192901a3e7fce3 614 Pfam PF00672 HAMP domain 310 356 1.4E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TP_0485 d0fe09a2e5f3855770192901a3e7fce3 614 SMART SM00044 357 557 4.0E-28 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TP_0485 d0fe09a2e5f3855770192901a3e7fce3 614 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 390 569 6.5E-34 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TP_0485 d0fe09a2e5f3855770192901a3e7fce3 614 SUPERFAMILY SSF158472 310 358 5.75E-7 T 11-10-2018 TP_0993 0ef280de6d2a41dbc0232e7c15c886e9 318 Gene3D G3DSA:2.40.40.10 28 119 3.3E-36 T 11-10-2018 IPR036908 RlpA-like domain superfamily TP_0993 0ef280de6d2a41dbc0232e7c15c886e9 318 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 8 120 21.973 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 TP_0993 0ef280de6d2a41dbc0232e7c15c886e9 318 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 30 119 2.8E-40 T 11-10-2018 IPR012997 Rare lipoprotein A TP_0993 0ef280de6d2a41dbc0232e7c15c886e9 318 Pfam PF03330 Lytic transglycolase 29 116 1.9E-24 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain TP_0993 0ef280de6d2a41dbc0232e7c15c886e9 318 SUPERFAMILY SSF50685 30 117 2.96E-12 T 11-10-2018 IPR036908 RlpA-like domain superfamily TP_0778 2bfcd48629e72f13745b6a8e8638088f 303 SUPERFAMILY SSF101386 9 114 2.06E-19 T 11-10-2018 TP_0778 2bfcd48629e72f13745b6a8e8638088f 303 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 31 110 1.3E-18 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TP_0778 2bfcd48629e72f13745b6a8e8638088f 303 Gene3D G3DSA:1.10.287.1080 5 144 1.8E-34 T 11-10-2018 TP_0778 2bfcd48629e72f13745b6a8e8638088f 303 TIGRFAM TIGR00444 mazG: MazG family protein 15 250 2.0E-46 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG TP_0778 2bfcd48629e72f13745b6a8e8638088f 303 Gene3D G3DSA:1.10.287.1080 148 256 2.5E-15 T 11-10-2018 TP_0158 1e8262b6069265e1b6a3c52b5b5bcfb9 228 Gene3D G3DSA:3.40.50.1000 12 215 8.2E-27 T 11-10-2018 IPR023214 HAD superfamily TP_0158 1e8262b6069265e1b6a3c52b5b5bcfb9 228 Pfam PF00702 haloacid dehalogenase-like hydrolase 9 184 7.9E-8 T 11-10-2018 TP_0158 1e8262b6069265e1b6a3c52b5b5bcfb9 228 Gene3D G3DSA:1.10.150.450 22 92 8.2E-27 T 11-10-2018 TP_0158 1e8262b6069265e1b6a3c52b5b5bcfb9 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 11 191 1.5E-20 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TP_0158 1e8262b6069265e1b6a3c52b5b5bcfb9 228 SUPERFAMILY SSF56784 9 212 4.96E-24 T 11-10-2018 IPR036412 HAD-like superfamily TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 Pfam PF07478 D-ala D-ala ligase C-terminus 143 346 6.5E-79 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 PIRSF PIRSF039102 1 358 2.2E-108 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 Gene3D G3DSA:3.30.1490.20 151 223 1.1E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 2 350 38.688 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 3 349 6.6E-99 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 Pfam PF01820 D-ala D-ala ligase N-terminus 4 126 1.3E-25 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 292 320 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 Gene3D G3DSA:3.40.50.20 1 125 1.8E-28 T 11-10-2018 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 SUPERFAMILY SSF52440 3 135 3.26E-31 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 Gene3D G3DSA:3.30.470.20 126 352 1.1E-69 T 11-10-2018 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 103 114 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0670 e54b4580cc84b5ec08af1a7d88f2c708 396 SUPERFAMILY SSF56059 136 351 1.36E-51 T 11-10-2018 TP_0097 25ddffdd4db23753450a119de3ce5cfc 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.8E-33 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TP_0097 25ddffdd4db23753450a119de3ce5cfc 72 SUPERFAMILY SSF50249 2 70 3.9E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0097 25ddffdd4db23753450a119de3ce5cfc 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.5E-25 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 TP_0097 25ddffdd4db23753450a119de3ce5cfc 72 Gene3D G3DSA:2.40.50.140 1 70 2.9E-34 T 11-10-2018 TP_0097 25ddffdd4db23753450a119de3ce5cfc 72 SMART SM00316 4 72 3.2E-5 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0097 25ddffdd4db23753450a119de3ce5cfc 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.74 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TP_0739 18188f7e24aac72b3a9015ecf6e904dd 398 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 299 389 1.3E-9 T 11-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain TP_0739 18188f7e24aac72b3a9015ecf6e904dd 398 Gene3D G3DSA:1.10.260.150 60 293 1.1E-18 T 11-10-2018 TP_0739 18188f7e24aac72b3a9015ecf6e904dd 398 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 92 203 9.8E-7 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 242 262 1.6E-26 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 211 236 1.6E-26 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 51 77 1.6E-26 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 288 314 1.6E-26 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 22 38 1.6E-26 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 1.6E-26 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 Pfam PF14841 FliG middle domain 132 203 1.2E-17 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 Pfam PF01706 FliG C-terminal domain 234 337 1.4E-18 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 SUPERFAMILY SSF48029 131 313 9.15E-35 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 Gene3D G3DSA:1.10.220.30 24 119 3.5E-12 T 11-10-2018 TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 Pfam PF14842 FliG N-terminal domain 25 123 6.6E-23 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 Gene3D G3DSA:1.10.220.30 120 207 2.6E-19 T 11-10-2018 TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 Gene3D G3DSA:1.10.220.30 212 340 2.1E-24 T 11-10-2018 TP_0026 93a76a9a5dfde5aff3e09bc468e559f3 340 SUPERFAMILY SSF48029 26 117 2.12E-14 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TP_0235 46c80267944f6035c19104ac9c7db160 59 Gene3D G3DSA:1.20.5.1030 1 58 1.3E-15 T 11-10-2018 IPR038379 SecE superfamily TP_0235 46c80267944f6035c19104ac9c7db160 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 4 59 2.0E-19 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 TP_0235 46c80267944f6035c19104ac9c7db160 59 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TP_0235 46c80267944f6035c19104ac9c7db160 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 12.654 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TP_0235 46c80267944f6035c19104ac9c7db160 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 1.3E-15 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TP_1027 07135f9c91423a28902de080740dc116 258 SUPERFAMILY SSF53167 10 252 8.9E-67 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TP_1027 07135f9c91423a28902de080740dc116 258 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 10 252 6.5E-133 T 11-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 TP_1027 07135f9c91423a28902de080740dc116 258 Pfam PF01048 Phosphorylase superfamily 23 243 1.9E-33 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TP_1027 07135f9c91423a28902de080740dc116 258 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 68 83 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 TP_1027 07135f9c91423a28902de080740dc116 258 Gene3D G3DSA:3.40.50.1580 9 257 1.1E-77 T 11-10-2018 TP_0013 5c5892f67d092b36dd991d606747123e 221 Gene3D G3DSA:3.40.50.11400 39 156 2.2E-33 T 11-10-2018 TP_0013 5c5892f67d092b36dd991d606747123e 221 Gene3D G3DSA:3.40.50.11390 157 216 2.2E-33 T 11-10-2018 TP_0013 5c5892f67d092b36dd991d606747123e 221 Pfam PF12683 Protein of unknown function (DUF3798) 39 217 3.8E-56 T 11-10-2018 IPR024258 Protein of unknown function DUF3798 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 SUPERFAMILY SSF52374 3 682 8.0E-132 T 11-10-2018 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 Gene3D G3DSA:3.40.50.620 34 590 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 Gene3D G3DSA:3.90.740.10 228 433 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 Gene3D G3DSA:3.10.330.110 591 643 0.0 T 11-10-2018 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 423 4.0E-60 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 Gene3D G3DSA:3.10.20.590 819 878 9.9E-18 T 11-10-2018 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 509 527 4.3E-55 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 581 591 4.3E-55 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 129 146 4.3E-55 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 548 570 4.3E-55 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 4.3E-55 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 187 200 4.3E-55 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 PRINTS PR00985 Leucyl-tRNA synthetase signature 155 171 4.3E-55 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 SUPERFAMILY SSF50677 227 434 2.93E-49 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 Gene3D G3DSA:1.10.730.10 7 810 0.0 T 11-10-2018 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 Pfam PF09334 tRNA synthetases class I (M) 42 184 2.6E-19 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 878 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 878 22.497 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 Pfam PF08264 Anticodon-binding domain of tRNA 728 841 9.9E-16 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TP_0586 a00e7ed8d75ca59994f3d90b72a49680 878 SUPERFAMILY SSF47323 677 877 2.06E-27 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0725 455729bbec7bb82ae91632864ff56328 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 217 6.2E-22 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TP_0725 455729bbec7bb82ae91632864ff56328 259 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 Gene3D G3DSA:3.40.50.1980 177 307 3.5E-51 T 11-10-2018 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 Gene3D G3DSA:3.40.50.1980 32 174 1.7E-48 T 11-10-2018 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 36 305 1.2E-67 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00691 Adhesin B signature 77 96 5.7E-20 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00691 Adhesin B signature 285 303 5.7E-20 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00691 Adhesin B signature 58 76 5.7E-20 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00691 Adhesin B signature 264 282 5.7E-20 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00691 Adhesin B signature 188 205 5.7E-20 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00691 Adhesin B signature 33 54 5.7E-20 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00690 Adhesin family signature 188 209 2.8E-46 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00690 Adhesin family signature 241 259 2.8E-46 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00690 Adhesin family signature 272 291 2.8E-46 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00690 Adhesin family signature 77 94 2.8E-46 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00690 Adhesin family signature 33 51 2.8E-46 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 PRINTS PR00690 Adhesin family signature 64 77 2.8E-46 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 TP_0163 90dea5b5ce61d3f943153892da6b9e6e 308 SUPERFAMILY SSF53807 32 306 4.91E-77 T 11-10-2018 TP_0830 faedad9004f2ba2c04f6bcefec3f1e2a 280 Gene3D G3DSA:3.30.70.660 115 245 1.1E-26 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 TP_0830 faedad9004f2ba2c04f6bcefec3f1e2a 280 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 5 257 27.919 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0830 faedad9004f2ba2c04f6bcefec3f1e2a 280 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 235 2.5E-45 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0830 faedad9004f2ba2c04f6bcefec3f1e2a 280 PIRSF PIRSF001430 4 245 6.1E-60 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0830 faedad9004f2ba2c04f6bcefec3f1e2a 280 Gene3D G3DSA:3.30.70.580 2 114 8.8E-32 T 11-10-2018 TP_0830 faedad9004f2ba2c04f6bcefec3f1e2a 280 SUPERFAMILY SSF55120 4 241 9.78E-64 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0830 faedad9004f2ba2c04f6bcefec3f1e2a 280 Pfam PF01416 tRNA pseudouridine synthase 153 237 6.2E-12 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0830 faedad9004f2ba2c04f6bcefec3f1e2a 280 Pfam PF01416 tRNA pseudouridine synthase 12 112 1.2E-5 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0189 25d6d8b9858c5918d56459a3a3b000b1 208 Pfam PF00297 Ribosomal protein L3 97 178 3.4E-14 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0189 25d6d8b9858c5918d56459a3a3b000b1 208 Gene3D G3DSA:2.40.50.620 32 91 8.7E-8 T 11-10-2018 TP_0189 25d6d8b9858c5918d56459a3a3b000b1 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 201 1.5E-72 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0189 25d6d8b9858c5918d56459a3a3b000b1 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 99 122 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site TP_0189 25d6d8b9858c5918d56459a3a3b000b1 208 Gene3D G3DSA:2.40.30.10 118 207 2.1E-13 T 11-10-2018 TP_0189 25d6d8b9858c5918d56459a3a3b000b1 208 SUPERFAMILY SSF50447 1 206 2.21E-67 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TP_0189 25d6d8b9858c5918d56459a3a3b000b1 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 204 33.927 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0608 0b208d8127a419f65c9498268481c034 296 SUPERFAMILY SSF48371 169 215 5.35E-5 T 11-10-2018 IPR016024 Armadillo-type fold TP_0608 0b208d8127a419f65c9498268481c034 296 Pfam PF13646 HEAT repeats 167 215 2.3E-8 T 11-10-2018 TP_0608 0b208d8127a419f65c9498268481c034 296 Gene3D G3DSA:1.25.10.10 131 239 2.2E-5 T 11-10-2018 IPR011989 Armadillo-like helical TP_0297 fa7670bd25746ab576fafa89349ead10 270 SUPERFAMILY SSF110997 189 264 1.44E-11 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TP_0297 fa7670bd25746ab576fafa89349ead10 270 Gene3D G3DSA:3.30.70.1070 185 266 1.8E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TP_0297 fa7670bd25746ab576fafa89349ead10 270 Pfam PF05036 Sporulation related domain 191 263 6.6E-13 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 TP_0742 f8156799bff1faf322f260c20166ec10 376 SUPERFAMILY SSF52540 163 349 2.5E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0742 f8156799bff1faf322f260c20166ec10 376 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 325 2.7E-114 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TP_0742 f8156799bff1faf322f260c20166ec10 376 Gene3D G3DSA:3.40.50.300 161 330 5.1E-41 T 11-10-2018 TP_0742 f8156799bff1faf322f260c20166ec10 376 Pfam PF01018 GTP1/OBG 5 159 2.4E-50 T 11-10-2018 IPR006169 GTP1/OBG domain TP_0742 f8156799bff1faf322f260c20166ec10 376 Hamap MF_01454 GTPase Obg [obg]. 3 328 40.759 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TP_0742 f8156799bff1faf322f260c20166ec10 376 SUPERFAMILY SSF82051 4 159 4.58E-47 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily TP_0742 f8156799bff1faf322f260c20166ec10 376 Gene3D G3DSA:2.70.210.12 1 160 2.2E-48 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily TP_0742 f8156799bff1faf322f260c20166ec10 376 Pfam PF01926 50S ribosome-binding GTPase 163 254 6.2E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0742 f8156799bff1faf322f260c20166ec10 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 164 184 1.7E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0742 f8156799bff1faf322f260c20166ec10 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 185 203 1.7E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0742 f8156799bff1faf322f260c20166ec10 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 213 228 1.7E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0742 f8156799bff1faf322f260c20166ec10 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 1.7E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0742 f8156799bff1faf322f260c20166ec10 376 PIRSF PIRSF002401 1 360 4.5E-113 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type TP_0853 8cb6c0c46ad543ecb5d11430b14ecd40 378 SUPERFAMILY SSF52540 1 310 1.55E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0853 8cb6c0c46ad543ecb5d11430b14ecd40 378 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 263 9.9E-15 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TP_0505 c66b0a377db0467807c86757d33b6bb2 444 Gene3D G3DSA:3.40.367.20 34 430 4.3E-64 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 Gene3D G3DSA:3.30.420.40 61 439 4.3E-64 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 PRINTS PR00475 Hexokinase family signature 76 92 2.3E-23 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 PRINTS PR00475 Hexokinase family signature 353 375 2.3E-23 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 PRINTS PR00475 Hexokinase family signature 138 163 2.3E-23 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 PRINTS PR00475 Hexokinase family signature 219 233 2.3E-23 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 PRINTS PR00475 Hexokinase family signature 191 207 2.3E-23 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 PRINTS PR00475 Hexokinase family signature 278 300 2.3E-23 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 SUPERFAMILY SSF53067 9 208 6.76E-37 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 SUPERFAMILY SSF53067 218 440 1.09E-35 T 11-10-2018 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 Pfam PF00349 Hexokinase 20 205 6.2E-20 T 11-10-2018 IPR022672 Hexokinase, N-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 TP_0505 c66b0a377db0467807c86757d33b6bb2 444 Pfam PF03727 Hexokinase 219 440 5.3E-28 T 11-10-2018 IPR022673 Hexokinase, C-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 637 84.281 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 566 627 2.1E-27 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 Pfam PF00204 DNA gyrase B 222 394 8.2E-58 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 SMART SM00387 30 174 2.2E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 SUPERFAMILY SSF55874 5 211 1.31E-68 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 Gene3D G3DSA:3.30.565.10 3 220 8.5E-88 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 Gene3D G3DSA:3.40.50.670 403 637 1.6E-100 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 Gene3D G3DSA:3.30.230.10 221 402 7.3E-67 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 Pfam PF01751 Toprim domain 423 526 1.8E-15 T 11-10-2018 IPR006171 TOPRIM domain TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 SMART SM00433 34 631 0.0 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 SUPERFAMILY SSF56719 398 629 6.02E-86 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 167 2.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 474 483 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 364 378 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 316 332 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 180 195 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 221 243 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 378 398 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 607 623 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 5 15 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 195 208 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR01159 DNA gyrase subunit B signature 591 603 4.7E-66 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR00418 DNA topoisomerase II family signature 508 525 1.1E-70 T 11-10-2018 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR00418 DNA topoisomerase II family signature 34 49 1.1E-70 T 11-10-2018 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR00418 DNA topoisomerase II family signature 112 126 1.1E-70 T 11-10-2018 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR00418 DNA topoisomerase II family signature 269 282 1.1E-70 T 11-10-2018 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR00418 DNA topoisomerase II family signature 490 506 1.1E-70 T 11-10-2018 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR00418 DNA topoisomerase II family signature 69 82 1.1E-70 T 11-10-2018 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR00418 DNA topoisomerase II family signature 424 438 1.1E-70 T 11-10-2018 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR00418 DNA topoisomerase II family signature 570 586 1.1E-70 T 11-10-2018 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 PRINTS PR00418 DNA topoisomerase II family signature 528 540 1.1E-70 T 11-10-2018 TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 SUPERFAMILY SSF54211 222 394 4.36E-54 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_1006 f6fe9321a82a634910f34c8ce7db1e34 637 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 636 2.1E-304 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TP_0604 7727bae93e2d78ef502436f13ba578c5 183 Pfam PF01765 Ribosome recycling factor 18 181 8.0E-57 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 TP_0604 7727bae93e2d78ef502436f13ba578c5 183 TIGRFAM TIGR00496 frr: ribosome recycling factor 8 182 4.5E-62 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TP_0604 7727bae93e2d78ef502436f13ba578c5 183 Gene3D G3DSA:1.10.132.20 10 180 2.2E-60 T 11-10-2018 TP_0604 7727bae93e2d78ef502436f13ba578c5 183 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 183 24.66 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TP_0604 7727bae93e2d78ef502436f13ba578c5 183 Gene3D G3DSA:3.30.1360.40 29 103 2.2E-60 T 11-10-2018 TP_0604 7727bae93e2d78ef502436f13ba578c5 183 SUPERFAMILY SSF55194 6 182 1.44E-62 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 TP_0905 4304bce6c9f75f060e4d9a2abce9336f 123 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 78 24.172 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0905 4304bce6c9f75f060e4d9a2abce9336f 123 SUPERFAMILY SSF54565 3 77 3.4E-28 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0905 4304bce6c9f75f060e4d9a2abce9336f 123 Pfam PF00886 Ribosomal protein S16 10 68 7.0E-22 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0905 4304bce6c9f75f060e4d9a2abce9336f 123 Gene3D G3DSA:3.30.1320.10 1 113 2.3E-30 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0905 4304bce6c9f75f060e4d9a2abce9336f 123 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 77 1.4E-29 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0633 5269e09407f6406b3065640ec36d9c1e 291 Pfam PF01625 Peptide methionine sulfoxide reductase 128 280 4.1E-66 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TP_0633 5269e09407f6406b3065640ec36d9c1e 291 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 127 2.5E-52 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TP_0633 5269e09407f6406b3065640ec36d9c1e 291 SUPERFAMILY SSF51316 6 126 3.82E-51 T 11-10-2018 IPR011057 Mss4-like superfamily TP_0633 5269e09407f6406b3065640ec36d9c1e 291 Gene3D G3DSA:2.170.150.20 2 129 1.1E-46 T 11-10-2018 TP_0633 5269e09407f6406b3065640ec36d9c1e 291 Pfam PF01641 SelR domain 6 122 7.6E-44 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TP_0633 5269e09407f6406b3065640ec36d9c1e 291 SUPERFAMILY SSF55068 110 283 3.01E-74 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TP_0633 5269e09407f6406b3065640ec36d9c1e 291 Gene3D G3DSA:3.30.1060.10 130 291 5.5E-70 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TP_0633 5269e09407f6406b3065640ec36d9c1e 291 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 126 285 39.62 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TP_0633 5269e09407f6406b3065640ec36d9c1e 291 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 128 279 3.7E-63 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TP_0085 9af83aff8b9e2e0706036decf54f1926 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 2.5E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain TP_0085 9af83aff8b9e2e0706036decf54f1926 148 SUPERFAMILY SSF55804 1 148 4.84E-34 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TP_0085 9af83aff8b9e2e0706036decf54f1926 148 Gene3D G3DSA:3.40.930.10 1 148 8.0E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TP_0943 fb38b02fde0b7b62cb250dcc4199ca02 148 Gene3D G3DSA:1.20.120.340 1 130 1.6E-40 T 11-10-2018 TP_0943 fb38b02fde0b7b62cb250dcc4199ca02 148 TIGRFAM TIGR00208 fliS: flagellar protein FliS 7 129 3.0E-25 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TP_0943 fb38b02fde0b7b62cb250dcc4199ca02 148 SUPERFAMILY SSF101116 7 128 4.58E-30 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 TP_0943 fb38b02fde0b7b62cb250dcc4199ca02 148 PIRSF PIRSF039090 2 137 3.7E-27 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TP_0943 fb38b02fde0b7b62cb250dcc4199ca02 148 Pfam PF02561 Flagellar protein FliS 9 126 1.1E-34 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TP_0985 57df1e72981e8240be5bfc493699cf27 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 535 549 6.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0985 57df1e72981e8240be5bfc493699cf27 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 222 6.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0985 57df1e72981e8240be5bfc493699cf27 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 491 507 6.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0985 57df1e72981e8240be5bfc493699cf27 602 PRINTS PR01042 Aspartyl-tRNA synthetase signature 227 240 6.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0985 57df1e72981e8240be5bfc493699cf27 602 Gene3D G3DSA:2.40.50.140 11 124 5.8E-31 T 11-10-2018 TP_0985 57df1e72981e8240be5bfc493699cf27 602 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 18 601 32.021 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TP_0985 57df1e72981e8240be5bfc493699cf27 602 Gene3D G3DSA:3.30.1360.30 292 436 3.6E-174 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TP_0985 57df1e72981e8240be5bfc493699cf27 602 SUPERFAMILY SSF55261 330 431 6.32E-18 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TP_0985 57df1e72981e8240be5bfc493699cf27 602 Pfam PF01336 OB-fold nucleic acid binding domain 35 119 1.9E-12 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TP_0985 57df1e72981e8240be5bfc493699cf27 602 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 18 599 2.7E-208 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TP_0985 57df1e72981e8240be5bfc493699cf27 602 SUPERFAMILY SSF50249 19 121 1.41E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0985 57df1e72981e8240be5bfc493699cf27 602 SUPERFAMILY SSF55681 135 600 6.77E-100 T 11-10-2018 TP_0985 57df1e72981e8240be5bfc493699cf27 602 Pfam PF00152 tRNA synthetases class II (D, K and N) 138 575 4.2E-103 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0985 57df1e72981e8240be5bfc493699cf27 602 Pfam PF02938 GAD domain 328 421 2.6E-26 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 TP_0985 57df1e72981e8240be5bfc493699cf27 602 Gene3D G3DSA:3.30.930.10 136 598 3.6E-174 T 11-10-2018 TP_0688 258a88b684d141c2d0cc16d8c4943f41 337 PIRSF PIRSF028757 8 331 4.0E-72 T 11-10-2018 IPR003507 Peptidase family S66 TP_0688 258a88b684d141c2d0cc16d8c4943f41 337 Gene3D G3DSA:3.50.30.60 166 330 1.1E-45 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily TP_0688 258a88b684d141c2d0cc16d8c4943f41 337 SUPERFAMILY SSF141986 172 323 3.01E-32 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily TP_0688 258a88b684d141c2d0cc16d8c4943f41 337 SUPERFAMILY SSF52317 12 170 3.02E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TP_0688 258a88b684d141c2d0cc16d8c4943f41 337 Pfam PF02016 LD-carboxypeptidase 19 317 3.0E-69 T 11-10-2018 IPR003507 Peptidase family S66 TP_0688 258a88b684d141c2d0cc16d8c4943f41 337 Gene3D G3DSA:3.40.50.10740 11 164 9.3E-50 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal TP_0741 abdab33be0f221a331b218c30eaf7211 204 Gene3D G3DSA:3.40.50.620 1 204 5.9E-53 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0741 abdab33be0f221a331b218c30eaf7211 204 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 203 27.815 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TP_0741 abdab33be0f221a331b218c30eaf7211 204 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 202 1.6E-62 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TP_0741 abdab33be0f221a331b218c30eaf7211 204 SUPERFAMILY SSF52374 2 203 4.56E-47 T 11-10-2018 TP_0741 abdab33be0f221a331b218c30eaf7211 204 Pfam PF01467 Cytidylyltransferase-like 5 176 1.1E-31 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TP_0741 abdab33be0f221a331b218c30eaf7211 204 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 3.8E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TP_0397 24852507104a72ed7022c2e5a8f28998 129 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 1 129 9.5E-39 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 TP_0397 24852507104a72ed7022c2e5a8f28998 129 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 82 126 1.9E-14 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TP_0063 ed8476572efa1a60b4cbd3177285121f 93 SUPERFAMILY SSF54995 1 92 4.06E-19 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0063 ed8476572efa1a60b4cbd3177285121f 93 Pfam PF01250 Ribosomal protein S6 4 90 1.5E-15 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0063 ed8476572efa1a60b4cbd3177285121f 93 Gene3D G3DSA:3.30.70.60 1 93 3.6E-19 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 TP_0063 ed8476572efa1a60b4cbd3177285121f 93 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 93 16.345 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 TP_0063 ed8476572efa1a60b4cbd3177285121f 93 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 2.8E-16 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0257 f58fc9ffb7e1cf432aec66b21320d6ec 356 SUPERFAMILY SSF51695 26 350 2.49E-73 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TP_0257 f58fc9ffb7e1cf432aec66b21320d6ec 356 Gene3D G3DSA:3.20.20.190 23 351 2.5E-92 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TP_0257 f58fc9ffb7e1cf432aec66b21320d6ec 356 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 31 344 7.6E-49 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TP_0621 8c93e54b0c6e503f9bcad0c274b31c6b 758 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 555 758 4.0E-95 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0621 8c93e54b0c6e503f9bcad0c274b31c6b 758 Pfam PF02707 Major Outer Sheath Protein N-terminal region 96 288 7.9E-98 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_0261 bed4d7088c219f357af6182814f3599a 347 Pfam PF00027 Cyclic nucleotide-binding domain 22 108 8.6E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TP_0261 bed4d7088c219f357af6182814f3599a 347 Gene3D G3DSA:1.25.40.10 132 346 2.6E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0261 bed4d7088c219f357af6182814f3599a 347 Gene3D G3DSA:2.60.120.10 15 131 4.6E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TP_0261 bed4d7088c219f357af6182814f3599a 347 SUPERFAMILY SSF48452 229 330 3.64E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0261 bed4d7088c219f357af6182814f3599a 347 Pfam PF00515 Tetratricopeptide repeat 296 328 1.1E-7 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TP_0261 bed4d7088c219f357af6182814f3599a 347 SMART SM00028 296 329 5.7E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0261 bed4d7088c219f357af6182814f3599a 347 SMART SM00028 259 292 3.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0261 bed4d7088c219f357af6182814f3599a 347 Pfam PF13174 Tetratricopeptide repeat 261 292 0.015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0261 bed4d7088c219f357af6182814f3599a 347 SUPERFAMILY SSF51206 19 133 1.7E-20 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TP_0077 409bca99f017ff038c7950ee6b5da5bf 538 SUPERFAMILY SSF51735 47 175 1.26E-13 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0077 409bca99f017ff038c7950ee6b5da5bf 538 Gene3D G3DSA:3.40.50.720 44 169 2.6E-23 T 11-10-2018 TP_0077 409bca99f017ff038c7950ee6b5da5bf 538 SUPERFAMILY SSF51735 185 458 2.58E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0077 409bca99f017ff038c7950ee6b5da5bf 538 Pfam PF02719 Polysaccharide biosynthesis protein 188 480 3.1E-108 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain TP_0077 409bca99f017ff038c7950ee6b5da5bf 538 Gene3D G3DSA:3.40.50.720 184 494 8.7E-98 T 11-10-2018 TP_0239 ccb8a88c416dc80c6c2ca8aff1e59361 180 Gene3D G3DSA:3.30.70.1730 9 138 8.5E-29 T 11-10-2018 TP_0239 ccb8a88c416dc80c6c2ca8aff1e59361 180 Pfam PF00466 Ribosomal protein L10 11 105 2.4E-18 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 TP_0239 ccb8a88c416dc80c6c2ca8aff1e59361 180 SUPERFAMILY SSF160369 10 164 4.97E-42 T 11-10-2018 TP_0239 ccb8a88c416dc80c6c2ca8aff1e59361 180 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 27 160 0.001 T 11-10-2018 TP_0239 ccb8a88c416dc80c6c2ca8aff1e59361 180 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 7 165 23.639 T 11-10-2018 IPR022973 Ribosomal protein L10 TP_0239 ccb8a88c416dc80c6c2ca8aff1e59361 180 ProSitePatterns PS01109 Ribosomal protein L10 signature. 12 46 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 PRINTS PR00474 Glutamate 5-kinase family signature 185 212 7.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 PRINTS PR00474 Glutamate 5-kinase family signature 246 266 7.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 7.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 PRINTS PR00474 Glutamate 5-kinase family signature 138 159 7.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 PRINTS PR00474 Glutamate 5-kinase family signature 98 126 7.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 PIRSF PIRSF000729 5 296 2.5E-71 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 Gene3D G3DSA:3.40.1160.10 1 296 2.2E-70 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 ProSitePatterns PS00902 Glutamate 5-kinase signature. 244 261 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 294 8.8E-70 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 296 32.764 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 SUPERFAMILY SSF53633 10 294 6.55E-52 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TP_0351 06ae50f5e943071720fb69fce90d4dfd 296 Pfam PF00696 Amino acid kinase family 10 272 7.0E-46 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TP_0089 189e27fc0948eb37d08490f8f38149ae 411 SUPERFAMILY SSF51206 197 307 1.57E-27 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TP_0089 189e27fc0948eb37d08490f8f38149ae 411 Gene3D G3DSA:2.60.120.10 1 123 2.7E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TP_0089 189e27fc0948eb37d08490f8f38149ae 411 SMART SM00100 178 296 5.4E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TP_0089 189e27fc0948eb37d08490f8f38149ae 411 SMART SM00100 1 107 0.36 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TP_0089 189e27fc0948eb37d08490f8f38149ae 411 Pfam PF00027 Cyclic nucleotide-binding domain 197 283 6.9E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TP_0089 189e27fc0948eb37d08490f8f38149ae 411 Pfam PF00027 Cyclic nucleotide-binding domain 7 95 6.3E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TP_0089 189e27fc0948eb37d08490f8f38149ae 411 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 245 262 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TP_0089 189e27fc0948eb37d08490f8f38149ae 411 SUPERFAMILY SSF51206 3 120 1.83E-18 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TP_0089 189e27fc0948eb37d08490f8f38149ae 411 Gene3D G3DSA:2.60.120.10 186 309 1.2E-28 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TP_0256 3b7666a1a535ac2362da1d15a6ffd47f 216 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 81 1.4E-12 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TP_0256 3b7666a1a535ac2362da1d15a6ffd47f 216 Gene3D G3DSA:1.20.120.1760 5 185 5.4E-7 T 11-10-2018 TP_0256 3b7666a1a535ac2362da1d15a6ffd47f 216 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 194 4.8E-35 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TP_0256 3b7666a1a535ac2362da1d15a6ffd47f 216 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TP_0256 3b7666a1a535ac2362da1d15a6ffd47f 216 PIRSF PIRSF000847 1 206 1.5E-50 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TP_0790 988dfda29b6c4abe8a19638aa43b9889 888 SUPERFAMILY SSF82866 473 885 6.93E-34 T 11-10-2018 TP_0790 988dfda29b6c4abe8a19638aa43b9889 888 SUPERFAMILY SSF82866 194 395 2.35E-27 T 11-10-2018 TP_0790 988dfda29b6c4abe8a19638aa43b9889 888 Gene3D G3DSA:1.20.1640.10 702 885 2.0E-12 T 11-10-2018 TP_0790 988dfda29b6c4abe8a19638aa43b9889 888 Gene3D G3DSA:1.20.1640.10 210 400 5.8E-11 T 11-10-2018 TP_0790 988dfda29b6c4abe8a19638aa43b9889 888 Pfam PF03176 MMPL family 668 880 2.5E-21 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TP_0790 988dfda29b6c4abe8a19638aa43b9889 888 Pfam PF03176 MMPL family 151 397 8.8E-24 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 Gene3D G3DSA:3.30.930.10 104 425 1.4E-118 T 11-10-2018 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 3.1E-21 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 Gene3D G3DSA:1.10.287.40 1 103 6.1E-17 T 11-10-2018 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 SUPERFAMILY SSF55681 116 423 4.66E-80 T 11-10-2018 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 PIRSF PIRSF001529 1 424 1.0E-135 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 398 3.2E-26 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 SUPERFAMILY SSF46589 2 111 9.42E-19 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 2 415 4.9E-134 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 2.3E-26 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 2.3E-26 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 2.3E-26 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 2.3E-26 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 2.3E-26 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TP_0647 37f7dda297fc084e4ec2fb2cd98f68d9 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 36.441 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 SUPERFAMILY SSF103190 270 331 3.66E-10 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 SMART SM00304 458 512 8.1E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 SUPERFAMILY SSF58104 562 844 4.36E-43 T 11-10-2018 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 SUPERFAMILY SSF58104 480 581 4.71E-8 T 11-10-2018 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 Gene3D G3DSA:1.10.287.950 526 844 5.9E-48 T 11-10-2018 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 Gene3D G3DSA:3.30.450.20 292 425 1.9E-15 T 11-10-2018 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 Gene3D G3DSA:1.20.1480.50 426 516 6.3E-8 T 11-10-2018 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 621 768 8.0E-27 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 Pfam PF00672 HAMP domain 458 508 2.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 Pfam PF02743 Cache domain 184 420 1.5E-19 T 11-10-2018 IPR033479 Double Cache domain 1 TP_0488 9e23442ea45ab39d7dc79d61f9473a73 845 SMART SM00283 555 802 3.5E-55 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TP_0872 cff04606ddaeb10c25ec92f086b01f5d 722 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 14 106 5.6E-15 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 TP_0872 cff04606ddaeb10c25ec92f086b01f5d 722 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 449 705 4.1E-64 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 SUPERFAMILY SSF53448 22 221 1.41E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 Gene3D G3DSA:3.30.1330.50 241 399 1.4E-55 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 244 398 2.0E-52 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 36 220 5.8E-36 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 Pfam PF02542 YgbB family 244 396 9.5E-53 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 243 398 31.021 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 SUPERFAMILY SSF69765 243 398 1.44E-52 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 277 292 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TP_0512 bae90fb6ebdacfb30030e10f480bc714 399 Gene3D G3DSA:3.90.550.10 2 226 5.8E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TP_0596 ad0b19992906226e0383c3d5c87c0bd2 370 Gene3D G3DSA:3.30.460.10 17 161 8.4E-45 T 11-10-2018 TP_0596 ad0b19992906226e0383c3d5c87c0bd2 370 SUPERFAMILY SSF81301 24 162 1.2E-35 T 11-10-2018 TP_0596 ad0b19992906226e0383c3d5c87c0bd2 370 Pfam PF01743 Poly A polymerase head domain 50 165 3.0E-34 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TP_0596 ad0b19992906226e0383c3d5c87c0bd2 370 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 198 253 5.1E-10 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TP_0596 ad0b19992906226e0383c3d5c87c0bd2 370 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 19 369 2.0E-139 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 TP_0596 ad0b19992906226e0383c3d5c87c0bd2 370 Gene3D G3DSA:1.10.3090.10 172 297 1.4E-17 T 11-10-2018 TP_0596 ad0b19992906226e0383c3d5c87c0bd2 370 SUPERFAMILY SSF81891 164 318 1.44E-18 T 11-10-2018 TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 4 380 2.5E-138 T 11-10-2018 IPR020823 Cell division protein FtsA TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 PIRSF PIRSF003101 1 414 2.8E-129 T 11-10-2018 IPR020823 Cell division protein FtsA TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 SMART SM00842 5 196 3.0E-75 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 Gene3D G3DSA:3.30.420.40 197 355 3.2E-95 T 11-10-2018 TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 SUPERFAMILY SSF53067 4 197 6.29E-47 T 11-10-2018 TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 414 25.989 T 11-10-2018 IPR020823 Cell division protein FtsA TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 Gene3D G3DSA:3.30.1490.110 82 169 3.2E-95 T 11-10-2018 TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 Pfam PF02491 SHS2 domain inserted in FTSA 80 162 4.2E-28 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 SUPERFAMILY SSF53067 199 379 1.43E-35 T 11-10-2018 TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 Pfam PF14450 Cell division protein FtsA 207 377 1.9E-19 T 11-10-2018 TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 Gene3D G3DSA:3.90.640.10 235 300 3.2E-95 T 11-10-2018 TP_0389 f5cedb335ddd8f4f44a9e593be5ee62e 414 Gene3D G3DSA:3.30.420.40 8 374 3.2E-95 T 11-10-2018 TP_0330 1ca9a9ed13dcc6dd1068595f5f8bfeb9 598 Gene3D G3DSA:3.40.50.300 307 470 2.4E-20 T 11-10-2018 TP_0330 1ca9a9ed13dcc6dd1068595f5f8bfeb9 598 Gene3D G3DSA:1.10.8.60 476 551 9.4E-7 T 11-10-2018 TP_0330 1ca9a9ed13dcc6dd1068595f5f8bfeb9 598 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 347 468 7.6E-16 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TP_0330 1ca9a9ed13dcc6dd1068595f5f8bfeb9 598 SUPERFAMILY SSF52540 313 549 1.26E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0330 1ca9a9ed13dcc6dd1068595f5f8bfeb9 598 SMART SM00382 342 474 0.0011 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0330 1ca9a9ed13dcc6dd1068595f5f8bfeb9 598 SUPERFAMILY SSF52540 110 270 3.98E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0907 f510e4062ab50d17ef705f3eb91ab78c 174 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 2 167 4.5E-23 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TP_0907 f510e4062ab50d17ef705f3eb91ab78c 174 SUPERFAMILY SSF50447 2 95 4.94E-7 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TP_0907 f510e4062ab50d17ef705f3eb91ab78c 174 Pfam PF01782 RimM N-terminal domain 2 94 3.8E-15 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 TP_0907 f510e4062ab50d17ef705f3eb91ab78c 174 Gene3D G3DSA:2.30.30.240 99 172 1.3E-6 T 11-10-2018 TP_0907 f510e4062ab50d17ef705f3eb91ab78c 174 SUPERFAMILY SSF50346 104 166 4.55E-7 T 11-10-2018 IPR011033 PRC-barrel-like superfamily TP_0907 f510e4062ab50d17ef705f3eb91ab78c 174 Gene3D G3DSA:2.40.30.60 1 97 1.2E-8 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 TP_0062 8e3c08e57f3442e3e883f1e9aba48b61 176 SUPERFAMILY SSF50249 4 145 3.77E-37 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0062 8e3c08e57f3442e3e883f1e9aba48b61 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 176 1.4E-45 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TP_0062 8e3c08e57f3442e3e883f1e9aba48b61 176 Gene3D G3DSA:2.40.50.140 1 122 9.8E-37 T 11-10-2018 TP_0062 8e3c08e57f3442e3e883f1e9aba48b61 176 Pfam PF00436 Single-strand binding protein family 4 105 2.8E-31 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TP_0062 8e3c08e57f3442e3e883f1e9aba48b61 176 Hamap MF_00984 Single-stranded DNA-binding protein. 4 109 31.517 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 14 473 2.8E-162 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 SUPERFAMILY SSF53244 330 475 2.22E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 Gene3D G3DSA:3.40.50.720 14 103 4.0E-22 T 11-10-2018 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 Pfam PF08245 Mur ligase middle domain 120 302 1.9E-16 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 Gene3D G3DSA:3.90.190.20 326 480 3.9E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 12 479 33.328 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 413 2.7E-20 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 Pfam PF01225 Mur ligase family, catalytic domain 14 114 1.1E-18 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 SUPERFAMILY SSF53623 106 304 9.16E-39 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 SUPERFAMILY SSF51984 14 102 2.09E-17 T 11-10-2018 TP_0341 a825c85780dbd176aa2d831e50ea3b8a 481 Gene3D G3DSA:3.40.1190.10 105 318 6.4E-44 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 Hamap MF_01465 Protein translocase subunit SecY [secY]. 6 429 28.112 T 11-10-2018 IPR026593 Protein translocase subunit SecY TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PIRSF PIRSF004557 5 433 1.9E-115 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 4.0E-86 T 11-10-2018 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 136 4.0E-86 T 11-10-2018 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 362 380 4.0E-86 T 11-10-2018 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 308 330 4.0E-86 T 11-10-2018 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 19 37 4.0E-86 T 11-10-2018 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 4.0E-86 T 11-10-2018 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 4.0E-86 T 11-10-2018 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 4.0E-86 T 11-10-2018 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 4.0E-86 T 11-10-2018 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 SUPERFAMILY SSF103491 7 420 1.31E-105 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 Gene3D G3DSA:1.10.3370.10 4 424 1.6E-140 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 423 2.6E-107 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TP_0208 276beb188f3bb41179a62fc19d9335f9 450 Pfam PF00344 SecY translocase 74 413 4.7E-101 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TP_0755 aa54e94622bd409af9eeca6a7756357c 180 Gene3D G3DSA:3.40.930.10 29 177 3.4E-33 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TP_0755 aa54e94622bd409af9eeca6a7756357c 180 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 40 176 1.8E-26 T 11-10-2018 IPR002178 PTS EIIA type-2 domain TP_0755 aa54e94622bd409af9eeca6a7756357c 180 SUPERFAMILY SSF55804 32 176 1.03E-27 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 SUPERFAMILY SSF46785 135 210 1.06E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 SMART SM00100 1 116 5.8E-18 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 Gene3D G3DSA:2.60.120.10 3 130 2.4E-32 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 Pfam PF00027 Cyclic nucleotide-binding domain 18 102 4.9E-24 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 SUPERFAMILY SSF51206 17 125 1.83E-30 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 Pfam PF13545 Crp-like helix-turn-helix domain 137 210 1.4E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 66 83 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 PRINTS PR00103 cAMP-dependent protein kinase signature 35 49 8.4E-5 T 11-10-2018 TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 PRINTS PR00103 cAMP-dependent protein kinase signature 64 73 8.4E-5 T 11-10-2018 TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 PRINTS PR00103 cAMP-dependent protein kinase signature 76 87 8.4E-5 T 11-10-2018 TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 PRINTS PR00103 cAMP-dependent protein kinase signature 20 34 8.4E-5 T 11-10-2018 TP_0262 d6386cb1c0c3b9183e027a7d94ced4b7 224 Gene3D G3DSA:1.10.10.10 135 216 1.7E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0947 5ebc9007918a0b86090958066d367551 215 PIRSF PIRSF001467 27 203 2.0E-68 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 TP_0947 5ebc9007918a0b86090958066d367551 215 Gene3D G3DSA:2.40.100.10 39 187 3.0E-61 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily TP_0947 5ebc9007918a0b86090958066d367551 215 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 84 101 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 TP_0947 5ebc9007918a0b86090958066d367551 215 SUPERFAMILY SSF50891 41 183 7.89E-57 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily TP_0947 5ebc9007918a0b86090958066d367551 215 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 55 70 3.1E-34 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TP_0947 5ebc9007918a0b86090958066d367551 215 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 129 144 3.1E-34 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TP_0947 5ebc9007918a0b86090958066d367551 215 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 3.1E-34 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TP_0947 5ebc9007918a0b86090958066d367551 215 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 89 101 3.1E-34 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TP_0947 5ebc9007918a0b86090958066d367551 215 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 156 3.1E-34 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TP_0947 5ebc9007918a0b86090958066d367551 215 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 42 181 4.1E-47 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TP_0392 342662e4fda210a17d1a251f93e080e8 319 SUPERFAMILY SSF48452 141 290 3.52E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0392 342662e4fda210a17d1a251f93e080e8 319 SMART SM00028 225 259 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0392 342662e4fda210a17d1a251f93e080e8 319 SMART SM00028 260 293 0.0023 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0392 342662e4fda210a17d1a251f93e080e8 319 SMART SM00028 140 173 1.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0392 342662e4fda210a17d1a251f93e080e8 319 Gene3D G3DSA:1.25.40.10 98 313 1.2E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0392 342662e4fda210a17d1a251f93e080e8 319 Pfam PF14559 Tetratricopeptide repeat 238 293 4.4E-9 T 11-10-2018 TP_0724 d4eb53027b41168a0021733929c6c483 238 Pfam PF00691 OmpA family 124 226 6.0E-18 T 11-10-2018 IPR006665 OmpA-like domain TP_0724 d4eb53027b41168a0021733929c6c483 238 SUPERFAMILY SSF103088 112 232 4.45E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily TP_0724 d4eb53027b41168a0021733929c6c483 238 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 51 3.1E-14 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain TP_0724 d4eb53027b41168a0021733929c6c483 238 Gene3D G3DSA:3.30.1330.60 78 237 2.8E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 501 1.4E-37 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 SUPERFAMILY SSF55681 8 519 3.95E-84 T 11-10-2018 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 PRINTS PR01046 Prolyl-tRNA synthetase signature 102 113 1.8E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 PRINTS PR01046 Prolyl-tRNA synthetase signature 66 84 1.8E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 PRINTS PR01046 Prolyl-tRNA synthetase signature 142 153 1.8E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 PRINTS PR01046 Prolyl-tRNA synthetase signature 132 140 1.8E-15 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 SUPERFAMILY SSF52954 506 610 2.27E-21 T 11-10-2018 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 SUPERFAMILY SSF55826 257 430 1.23E-21 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 Pfam PF03129 Anticodon binding domain 518 581 9.3E-11 T 11-10-2018 IPR004154 Anticodon-binding TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 Pfam PF04073 Aminoacyl-tRNA editing domain 268 357 3.0E-18 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 2 586 2.4E-164 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 Gene3D G3DSA:3.40.50.800 1 587 9.6E-208 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 Gene3D G3DSA:3.30.930.10 9 507 9.6E-208 T 11-10-2018 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 609 35.866 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TP_0160 f73587991d111ac6ed8110dbcf3b9ad6 617 Gene3D G3DSA:3.90.960.10 249 431 9.6E-208 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TP_0417 d2859f6d3dbd091804fa479cd1fa72ef 559 SUPERFAMILY SSF56317 219 515 1.11E-37 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TP_0417 d2859f6d3dbd091804fa479cd1fa72ef 559 Pfam PF00795 Carbon-nitrogen hydrolase 223 495 8.6E-19 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TP_0417 d2859f6d3dbd091804fa479cd1fa72ef 559 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 7 525 17.384 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TP_0417 d2859f6d3dbd091804fa479cd1fa72ef 559 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 56 487 1.1E-133 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TP_0417 d2859f6d3dbd091804fa479cd1fa72ef 559 Gene3D G3DSA:3.60.110.10 217 503 1.0E-15 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TP_0946 0856251955d7319199eee4121fd803c0 222 PIRSF PIRSF003078 7 216 7.9E-39 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TP_0946 0856251955d7319199eee4121fd803c0 222 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 30 214 4.4E-56 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TP_0946 0856251955d7319199eee4121fd803c0 222 Gene3D G3DSA:3.40.50.150 2 222 2.5E-47 T 11-10-2018 TP_0946 0856251955d7319199eee4121fd803c0 222 Pfam PF02527 rRNA small subunit methyltransferase G 27 211 1.8E-58 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TP_0946 0856251955d7319199eee4121fd803c0 222 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 19 212 20.744 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TP_0946 0856251955d7319199eee4121fd803c0 222 SUPERFAMILY SSF53335 24 213 7.49E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 80 1.1E-31 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 Pfam PF01016 Ribosomal L27 protein 2 80 7.7E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 8.0E-18 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 Gene3D G3DSA:2.40.50.100 21 86 3.2E-27 T 11-10-2018 TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 PRINTS PR00063 Ribosomal protein L27 signature 29 53 9.5E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 PRINTS PR00063 Ribosomal protein L27 signature 4 28 9.5E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 PRINTS PR00063 Ribosomal protein L27 signature 54 78 9.5E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 26.721 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0743 82dddcd90bf86415fbbbc9c20955e8a7 87 SUPERFAMILY SSF110324 2 80 4.53E-30 T 11-10-2018 TP_0628 b6aaf8cb5a279c5654bb84ea46abcdf2 493 Gene3D G3DSA:3.20.140.10 6 484 2.0E-171 T 11-10-2018 TP_0628 b6aaf8cb5a279c5654bb84ea46abcdf2 493 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 480 5.1E-204 T 11-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 TP_0628 b6aaf8cb5a279c5654bb84ea46abcdf2 493 Gene3D G3DSA:3.20.20.70 146 314 2.0E-171 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0628 b6aaf8cb5a279c5654bb84ea46abcdf2 493 SUPERFAMILY SSF54675 3 133 4.91E-45 T 11-10-2018 TP_0628 b6aaf8cb5a279c5654bb84ea46abcdf2 493 SUPERFAMILY SSF51690 134 490 1.05E-106 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 TP_0628 b6aaf8cb5a279c5654bb84ea46abcdf2 493 PIRSF PIRSF000484 1 493 4.3E-166 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 TP_0628 b6aaf8cb5a279c5654bb84ea46abcdf2 493 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 150 262 1.1E-7 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 TP_0367 49de55099b8e5b127c388a960b4349be 941 Gene3D G3DSA:3.40.50.300 773 935 1.3E-44 T 11-10-2018 TP_0367 49de55099b8e5b127c388a960b4349be 941 Gene3D G3DSA:3.40.50.300 2 232 2.7E-51 T 11-10-2018 TP_0367 49de55099b8e5b127c388a960b4349be 941 SUPERFAMILY SSF52540 3 925 3.93E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0367 49de55099b8e5b127c388a960b4349be 941 SUPERFAMILY SSF57997 249 411 3.27E-7 T 11-10-2018 TP_0367 49de55099b8e5b127c388a960b4349be 941 Hamap MF_01894 Chromosome partition protein Smc [smc]. 2 927 18.012 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 TP_0367 49de55099b8e5b127c388a960b4349be 941 PIRSF PIRSF005719 1 325 4.8E-93 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein TP_0367 49de55099b8e5b127c388a960b4349be 941 PIRSF PIRSF005719 224 450 1.8E-11 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein TP_0367 49de55099b8e5b127c388a960b4349be 941 PIRSF PIRSF005719 477 934 7.0E-101 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein TP_0367 49de55099b8e5b127c388a960b4349be 941 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 918 7.5E-70 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TP_0073 078bcbe408cf3352b80f3ae7e1c46a2b 513 Pfam PF08668 HDOD domain 254 446 1.6E-54 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TP_0073 078bcbe408cf3352b80f3ae7e1c46a2b 513 SUPERFAMILY SSF109604 248 501 1.93E-53 T 11-10-2018 TP_0073 078bcbe408cf3352b80f3ae7e1c46a2b 513 Gene3D G3DSA:1.10.3210.10 232 511 5.8E-59 T 11-10-2018 TP_0366 e80fbd25fbdc756f8b70ab825d24f6de 144 Pfam PF00072 Response regulator receiver domain 27 139 9.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TP_0366 e80fbd25fbdc756f8b70ab825d24f6de 144 SUPERFAMILY SSF52172 24 144 1.85E-32 T 11-10-2018 IPR011006 CheY-like superfamily TP_0366 e80fbd25fbdc756f8b70ab825d24f6de 144 SMART SM00448 25 139 3.3E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TP_0366 e80fbd25fbdc756f8b70ab825d24f6de 144 Gene3D G3DSA:3.40.50.2300 16 143 8.8E-36 T 11-10-2018 TP_0325 f117352f545708616105553b910acc90 988 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 731 908 2.0E-5 T 11-10-2018 IPR007452 Translocation and assembly module TamB TP_0875 70ea46428b1cca7e29adb55190c587f4 135 SUPERFAMILY SSF52540 22 125 2.93E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0875 70ea46428b1cca7e29adb55190c587f4 135 Gene3D G3DSA:3.40.50.300 2 135 6.8E-37 T 11-10-2018 TP_0875 70ea46428b1cca7e29adb55190c587f4 135 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 6 123 6.4E-33 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TP_0875 70ea46428b1cca7e29adb55190c587f4 135 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 134 1.2E-34 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TP_0713 273afffffff204d17bf3b45cc581b9eb 437 SUPERFAMILY SSF52540 144 246 1.69E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0713 273afffffff204d17bf3b45cc581b9eb 437 Gene3D G3DSA:1.20.120.1380 162 407 1.1E-55 T 11-10-2018 TP_0713 273afffffff204d17bf3b45cc581b9eb 437 Gene3D G3DSA:3.40.50.300 212 405 1.1E-55 T 11-10-2018 TP_0713 273afffffff204d17bf3b45cc581b9eb 437 SMART SM00382 216 394 5.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0713 273afffffff204d17bf3b45cc581b9eb 437 SUPERFAMILY SSF52540 217 415 1.32E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0713 273afffffff204d17bf3b45cc581b9eb 437 SMART SM00962 217 417 1.3E-42 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0713 273afffffff204d17bf3b45cc581b9eb 437 Pfam PF00448 SRP54-type protein, GTPase domain 219 415 1.6E-33 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0713 273afffffff204d17bf3b45cc581b9eb 437 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 6 311 7.8E-57 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 Gene3D G3DSA:1.10.8.60 314 392 2.4E-27 T 11-10-2018 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TP_0519 7a993210d4498a515e04c702b35d2f2c 458 Gene3D G3DSA:3.40.50.300 134 313 3.5E-64 T 11-10-2018 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 SUPERFAMILY SSF46689 356 445 6.45E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 4.6E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 4.6E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 Pfam PF00158 Sigma-54 interaction domain 143 310 3.3E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 SMART SM00382 163 310 4.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0519 7a993210d4498a515e04c702b35d2f2c 458 Pfam PF00072 Response regulator receiver domain 5 112 5.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 SUPERFAMILY SSF52540 142 386 8.71E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0519 7a993210d4498a515e04c702b35d2f2c 458 SUPERFAMILY SSF52172 3 188 1.29E-45 T 11-10-2018 IPR011006 CheY-like superfamily TP_0519 7a993210d4498a515e04c702b35d2f2c 458 Gene3D G3DSA:3.40.50.2300 1 133 3.5E-37 T 11-10-2018 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 Gene3D G3DSA:1.10.10.60 400 447 4.4E-14 T 11-10-2018 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 Pfam PF02954 Bacterial regulatory protein, Fis family 405 445 5.1E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TP_0519 7a993210d4498a515e04c702b35d2f2c 458 SMART SM00448 3 114 1.3E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TP_0238 068b6b6b8ade6693863135d50d1dad00 226 PIRSF PIRSF002155 1 223 4.0E-71 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0238 068b6b6b8ade6693863135d50d1dad00 226 SUPERFAMILY SSF56808 5 220 3.27E-67 T 11-10-2018 IPR023674 Ribosomal protein L1-like TP_0238 068b6b6b8ade6693863135d50d1dad00 226 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 225 34.718 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TP_0238 068b6b6b8ade6693863135d50d1dad00 226 Gene3D G3DSA:3.40.50.790 64 155 1.0E-67 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich TP_0238 068b6b6b8ade6693863135d50d1dad00 226 Gene3D G3DSA:3.30.190.20 21 218 1.0E-67 T 11-10-2018 TP_0238 068b6b6b8ade6693863135d50d1dad00 226 Pfam PF00687 Ribosomal protein L1p/L10e family 29 216 4.9E-43 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein TP_0238 068b6b6b8ade6693863135d50d1dad00 226 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 223 1.1E-92 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TP_0238 068b6b6b8ade6693863135d50d1dad00 226 ProSitePatterns PS01199 Ribosomal protein L1 signature. 117 135 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0931 26da4f781f840e94953bea3468426b3b 476 Pfam PF01204 Trehalase 181 362 1.6E-11 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 TP_0931 26da4f781f840e94953bea3468426b3b 476 SUPERFAMILY SSF48208 61 406 1.7E-57 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TP_0931 26da4f781f840e94953bea3468426b3b 476 Gene3D G3DSA:1.50.10.10 50 381 1.8E-46 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TP_0141 dc7d3026d8127f7d3da833719c2c9037 177 SUPERFAMILY SSF53155 13 96 1.0E-13 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TP_0141 dc7d3026d8127f7d3da833719c2c9037 177 SUPERFAMILY SSF46767 90 171 5.76E-26 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 TP_0141 dc7d3026d8127f7d3da833719c2c9037 177 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 92 171 1.1E-25 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TP_0141 dc7d3026d8127f7d3da833719c2c9037 177 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 91 170 5.3E-34 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TP_0141 dc7d3026d8127f7d3da833719c2c9037 177 Gene3D G3DSA:1.10.10.10 88 172 2.8E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0141 dc7d3026d8127f7d3da833719c2c9037 177 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 141 147 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TP_0141 dc7d3026d8127f7d3da833719c2c9037 177 Gene3D G3DSA:3.30.160.70 12 86 2.1E-10 T 11-10-2018 TP_0846 192a2d85cf76f8dff5062a7ab214ed70 108 Pfam PF05164 Cell division protein ZapA 9 87 5.2E-8 T 11-10-2018 IPR007838 Cell division protein ZapA-like TP_0846 192a2d85cf76f8dff5062a7ab214ed70 108 SUPERFAMILY SSF102829 8 83 1.31E-6 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily TP_0065 df04be1a688fcf8d52a75ed32d98fb49 195 Pfam PF03602 Conserved hypothetical protein 95 3 168 3.8E-33 T 11-10-2018 TP_0065 df04be1a688fcf8d52a75ed32d98fb49 195 Gene3D G3DSA:3.40.50.150 1 173 4.7E-37 T 11-10-2018 TP_0065 df04be1a688fcf8d52a75ed32d98fb49 195 SUPERFAMILY SSF53335 3 168 3.7E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0065 df04be1a688fcf8d52a75ed32d98fb49 195 PIRSF PIRSF004553 1 171 1.0E-62 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 TP_0310 0e1ad7e5e4a0db96b01b833b26758421 127 Gene3D G3DSA:2.40.50.140 17 124 1.6E-17 T 11-10-2018 TP_0310 0e1ad7e5e4a0db96b01b833b26758421 127 Pfam PF00436 Single-strand binding protein family 22 121 2.8E-20 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TP_0310 0e1ad7e5e4a0db96b01b833b26758421 127 SUPERFAMILY SSF50249 22 121 1.1E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0310 0e1ad7e5e4a0db96b01b833b26758421 127 PIRSF PIRSF002070 19 124 9.8E-15 T 11-10-2018 TP_0321 00e99ffa778656aa7e98b782de6af5ca 533 Gene3D G3DSA:3.40.50.300 283 513 2.4E-38 T 11-10-2018 TP_0321 00e99ffa778656aa7e98b782de6af5ca 533 SUPERFAMILY SSF52540 4 228 1.66E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0321 00e99ffa778656aa7e98b782de6af5ca 533 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0321 00e99ffa778656aa7e98b782de6af5ca 533 Pfam PF00005 ABC transporter 23 170 8.3E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0321 00e99ffa778656aa7e98b782de6af5ca 533 SUPERFAMILY SSF52540 290 503 7.74E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0321 00e99ffa778656aa7e98b782de6af5ca 533 Gene3D G3DSA:3.40.50.300 2 242 7.2E-55 T 11-10-2018 TP_0321 00e99ffa778656aa7e98b782de6af5ca 533 Pfam PF00005 ABC transporter 291 448 1.5E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0321 00e99ffa778656aa7e98b782de6af5ca 533 SMART SM00382 299 488 1.4 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0321 00e99ffa778656aa7e98b782de6af5ca 533 SMART SM00382 29 218 2.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0659 33f3fbe1d6dfd1d6a60ea63d2572296a 416 Pfam PF07196 Flagellin hook IN motif 225 264 5.7E-5 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TP_0659 33f3fbe1d6dfd1d6a60ea63d2572296a 416 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 5 415 3.2E-87 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 TP_0659 33f3fbe1d6dfd1d6a60ea63d2572296a 416 SUPERFAMILY SSF64518 5 416 3.66E-51 T 11-10-2018 TP_0659 33f3fbe1d6dfd1d6a60ea63d2572296a 416 Gene3D G3DSA:1.20.1330.10 43 226 4.4E-30 T 11-10-2018 TP_0659 33f3fbe1d6dfd1d6a60ea63d2572296a 416 Pfam PF00669 Bacterial flagellin N-terminal helical region 20 143 5.3E-14 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TP_0442 e635a8e28eb2bd02ccde34d56f1cdd29 573 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 520 1.7E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TP_0442 e635a8e28eb2bd02ccde34d56f1cdd29 573 PIRSF PIRSF003128 1 566 1.0E-154 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TP_0442 e635a8e28eb2bd02ccde34d56f1cdd29 573 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 562 1.1E-232 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TP_0442 e635a8e28eb2bd02ccde34d56f1cdd29 573 Gene3D G3DSA:3.40.50.300 263 562 7.2E-56 T 11-10-2018 TP_0442 e635a8e28eb2bd02ccde34d56f1cdd29 573 Gene3D G3DSA:3.40.50.300 1 262 8.3E-40 T 11-10-2018 TP_0442 e635a8e28eb2bd02ccde34d56f1cdd29 573 SUPERFAMILY SSF52540 1 518 1.43E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0843 b2228cb605f138db2a12c7d21552e74e 274 PRINTS PR00625 DnaJ domain signature 42 57 1.1E-9 T 11-10-2018 IPR001623 DnaJ domain TP_0843 b2228cb605f138db2a12c7d21552e74e 274 PRINTS PR00625 DnaJ domain signature 24 42 1.1E-9 T 11-10-2018 IPR001623 DnaJ domain TP_0843 b2228cb605f138db2a12c7d21552e74e 274 PRINTS PR00625 DnaJ domain signature 66 86 1.1E-9 T 11-10-2018 IPR001623 DnaJ domain TP_0843 b2228cb605f138db2a12c7d21552e74e 274 SMART SM00271 21 86 1.0E-19 T 11-10-2018 IPR001623 DnaJ domain TP_0843 b2228cb605f138db2a12c7d21552e74e 274 Pfam PF00226 DnaJ domain 22 91 1.7E-15 T 11-10-2018 IPR001623 DnaJ domain TP_0843 b2228cb605f138db2a12c7d21552e74e 274 Gene3D G3DSA:1.10.287.110 19 96 2.9E-18 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TP_0843 b2228cb605f138db2a12c7d21552e74e 274 SUPERFAMILY SSF46565 21 106 1.23E-18 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TP_0634 d9b76af300282194ca866e98008d3715 823 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 638 1.1E-211 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TP_0634 d9b76af300282194ca866e98008d3715 823 Gene3D G3DSA:1.10.150.20 408 478 2.5E-10 T 11-10-2018 TP_0634 d9b76af300282194ca866e98008d3715 823 SUPERFAMILY SSF56091 3 299 4.32E-61 T 11-10-2018 TP_0634 d9b76af300282194ca866e98008d3715 823 SUPERFAMILY SSF52113 656 730 1.8E-11 T 11-10-2018 IPR036420 BRCT domain superfamily TP_0634 d9b76af300282194ca866e98008d3715 823 SUPERFAMILY SSF52113 564 643 1.8E-8 T 11-10-2018 IPR036420 BRCT domain superfamily TP_0634 d9b76af300282194ca866e98008d3715 823 Gene3D G3DSA:2.40.50.140 299 371 6.2E-16 T 11-10-2018 TP_0634 d9b76af300282194ca866e98008d3715 823 Gene3D G3DSA:3.40.50.10190 645 731 3.4E-16 T 11-10-2018 IPR036420 BRCT domain superfamily TP_0634 d9b76af300282194ca866e98008d3715 823 Gene3D G3DSA:3.40.50.10190 732 820 7.0E-19 T 11-10-2018 IPR036420 BRCT domain superfamily TP_0634 d9b76af300282194ca866e98008d3715 823 Gene3D G3DSA:3.40.50.10190 557 644 1.6E-14 T 11-10-2018 IPR036420 BRCT domain superfamily TP_0634 d9b76af300282194ca866e98008d3715 823 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 304 373 1.2E-13 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 TP_0634 d9b76af300282194ca866e98008d3715 823 SUPERFAMILY SSF52113 745 819 8.18E-14 T 11-10-2018 IPR036420 BRCT domain superfamily TP_0634 d9b76af300282194ca866e98008d3715 823 SMART SM00532 3 424 1.0E-177 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 TP_0634 d9b76af300282194ca866e98008d3715 823 PIRSF PIRSF001604 584 734 1.9E-37 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TP_0634 d9b76af300282194ca866e98008d3715 823 PIRSF PIRSF001604 1 647 8.9E-225 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TP_0634 d9b76af300282194ca866e98008d3715 823 PIRSF PIRSF001604 735 821 1.9E-11 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TP_0634 d9b76af300282194ca866e98008d3715 823 SMART SM00278 420 439 110.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TP_0634 d9b76af300282194ca866e98008d3715 823 SMART SM00278 454 473 0.05 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TP_0634 d9b76af300282194ca866e98008d3715 823 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 564 641 3.0E-6 T 11-10-2018 IPR001357 BRCT domain TP_0634 d9b76af300282194ca866e98008d3715 823 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 744 817 2.3E-12 T 11-10-2018 IPR001357 BRCT domain TP_0634 d9b76af300282194ca866e98008d3715 823 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 657 729 3.5E-7 T 11-10-2018 IPR001357 BRCT domain TP_0634 d9b76af300282194ca866e98008d3715 823 Gene3D G3DSA:1.10.150.20 479 553 1.0E-8 T 11-10-2018 TP_0634 d9b76af300282194ca866e98008d3715 823 SMART SM00292 564 645 3.0E-7 T 11-10-2018 IPR001357 BRCT domain TP_0634 d9b76af300282194ca866e98008d3715 823 SMART SM00292 743 822 7.7E-14 T 11-10-2018 IPR001357 BRCT domain TP_0634 d9b76af300282194ca866e98008d3715 823 SMART SM00292 656 732 4.6E-10 T 11-10-2018 IPR001357 BRCT domain TP_0634 d9b76af300282194ca866e98008d3715 823 Gene3D G3DSA:1.10.287.610 1 65 2.6E-9 T 11-10-2018 TP_0634 d9b76af300282194ca866e98008d3715 823 Gene3D G3DSA:3.30.470.30 66 239 2.1E-44 T 11-10-2018 TP_0634 d9b76af300282194ca866e98008d3715 823 SUPERFAMILY SSF47781 382 554 2.11E-33 T 11-10-2018 IPR010994 RuvA domain 2-like TP_0634 d9b76af300282194ca866e98008d3715 823 SUPERFAMILY SSF50249 300 379 5.48E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0634 d9b76af300282194ca866e98008d3715 823 Pfam PF12826 Helix-hairpin-helix motif 485 537 2.1E-6 T 11-10-2018 TP_0634 d9b76af300282194ca866e98008d3715 823 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 100 129 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site TP_0634 d9b76af300282194ca866e98008d3715 823 Gene3D G3DSA:3.30.1490.70 70 297 2.1E-44 T 11-10-2018 TP_0634 d9b76af300282194ca866e98008d3715 823 Hamap MF_01588 DNA ligase [ligA]. 2 819 47.551 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TP_0634 d9b76af300282194ca866e98008d3715 823 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 299 3.6E-41 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 TP_0995 903a5b8ff62bd1f71997a25c9bae4cdc 428 SUPERFAMILY SSF51206 309 415 4.06E-21 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TP_0995 903a5b8ff62bd1f71997a25c9bae4cdc 428 SMART SM00100 293 412 2.3E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TP_0995 903a5b8ff62bd1f71997a25c9bae4cdc 428 Pfam PF00027 Cyclic nucleotide-binding domain 318 400 3.2E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TP_0995 903a5b8ff62bd1f71997a25c9bae4cdc 428 SUPERFAMILY SSF55874 184 304 4.39E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TP_0995 903a5b8ff62bd1f71997a25c9bae4cdc 428 Pfam PF13581 Histidine kinase-like ATPase domain 172 295 1.1E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TP_0995 903a5b8ff62bd1f71997a25c9bae4cdc 428 Gene3D G3DSA:2.60.120.10 300 426 4.4E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TP_0518 f86b581083b47f209fccd77562fcb2ce 230 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 22 115 5.5E-15 T 11-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TP_0518 f86b581083b47f209fccd77562fcb2ce 230 Gene3D G3DSA:3.40.50.10240 4 222 6.4E-37 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TP_0518 f86b581083b47f209fccd77562fcb2ce 230 SUPERFAMILY SSF63862 153 205 3.53E-5 T 11-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TP_0518 f86b581083b47f209fccd77562fcb2ce 230 SUPERFAMILY SSF63999 1 125 4.58E-31 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TP_0518 f86b581083b47f209fccd77562fcb2ce 230 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 5 206 5.2E-28 T 11-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TP_0626 e8deee84d26bda2dcf9905e0e65e66b8 391 SUPERFAMILY SSF56300 1 283 8.36E-47 T 11-10-2018 TP_0626 e8deee84d26bda2dcf9905e0e65e66b8 391 Gene3D G3DSA:3.60.21.10 1 267 2.5E-64 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TP_0626 e8deee84d26bda2dcf9905e0e65e66b8 391 Pfam PF00149 Calcineurin-like phosphoesterase 1 220 3.5E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TP_0626 e8deee84d26bda2dcf9905e0e65e66b8 391 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 247 7.0E-90 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 SUPERFAMILY SSF55424 322 443 1.17E-29 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 Gene3D G3DSA:3.50.50.60 3 315 2.5E-100 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 SUPERFAMILY SSF51905 2 316 3.46E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 306 1.2E-60 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 Gene3D G3DSA:3.50.50.60 117 242 2.5E-100 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 Gene3D G3DSA:3.30.390.30 326 445 2.3E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.6E-16 T 11-10-2018 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 3.6E-16 T 11-10-2018 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 3.6E-16 T 11-10-2018 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 3.6E-16 T 11-10-2018 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 3.6E-16 T 11-10-2018 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 333 430 2.0E-11 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.7E-21 T 11-10-2018 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.7E-21 T 11-10-2018 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 1.7E-21 T 11-10-2018 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.7E-21 T 11-10-2018 TP_0921 b88f52438446a14b085b3cfd2eb0c93e 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.7E-21 T 11-10-2018 TP_0999 a3566c676088a660a7966f41350d8d93 799 SMART SM00382 479 658 0.0046 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0999 a3566c676088a660a7966f41350d8d93 799 Pfam PF01580 FtsK/SpoIIIE family 449 581 5.5E-41 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TP_0999 a3566c676088a660a7966f41350d8d93 799 Pfam PF01580 FtsK/SpoIIIE family 586 635 9.3E-11 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TP_0999 a3566c676088a660a7966f41350d8d93 799 Gene3D G3DSA:3.40.50.300 441 722 2.7E-100 T 11-10-2018 TP_0999 a3566c676088a660a7966f41350d8d93 799 SUPERFAMILY SSF52540 418 707 7.94E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0999 a3566c676088a660a7966f41350d8d93 799 Pfam PF09397 Ftsk gamma domain 738 797 2.8E-29 T 11-10-2018 IPR018541 FtsK gamma domain TP_0999 a3566c676088a660a7966f41350d8d93 799 SUPERFAMILY SSF46785 737 798 2.31E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TP_0999 a3566c676088a660a7966f41350d8d93 799 Gene3D G3DSA:3.30.980.40 337 440 2.4E-31 T 11-10-2018 TP_0999 a3566c676088a660a7966f41350d8d93 799 Gene3D G3DSA:1.10.10.10 734 797 1.0E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0999 a3566c676088a660a7966f41350d8d93 799 SMART SM00843 736 799 2.8E-36 T 11-10-2018 IPR018541 FtsK gamma domain TP_0806 c8a295805e9aeaf09158e2592ae24d69 498 SUPERFAMILY SSF55729 57 241 2.33E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TP_0806 c8a295805e9aeaf09158e2592ae24d69 498 Gene3D G3DSA:3.40.630.30 204 335 3.6E-19 T 11-10-2018 TP_0806 c8a295805e9aeaf09158e2592ae24d69 498 Gene3D G3DSA:3.40.630.30 346 442 1.5E-30 T 11-10-2018 TP_0806 c8a295805e9aeaf09158e2592ae24d69 498 Pfam PF02388 FemAB family 58 461 5.2E-132 T 11-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 TP_0806 c8a295805e9aeaf09158e2592ae24d69 498 SUPERFAMILY SSF55729 234 456 1.38E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TP_0887 0159f314ac0769bbebccb27c0153d55b 89 Gene3D G3DSA:1.10.287.10 1 89 9.9E-31 T 11-10-2018 TP_0887 0159f314ac0769bbebccb27c0153d55b 89 SMART SM01387 8 88 2.3E-39 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0887 0159f314ac0769bbebccb27c0153d55b 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 49 1.0E-16 T 11-10-2018 TP_0887 0159f314ac0769bbebccb27c0153d55b 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.658 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0887 0159f314ac0769bbebccb27c0153d55b 89 SUPERFAMILY SSF47060 3 89 2.65E-29 T 11-10-2018 IPR009068 S15/NS1, RNA-binding TP_0887 0159f314ac0769bbebccb27c0153d55b 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 4.2E-38 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0887 0159f314ac0769bbebccb27c0153d55b 89 Pfam PF00312 Ribosomal protein S15 10 88 1.4E-30 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0164 c2f0f7a2cc98bb3c123e71ece2d47367 266 Gene3D G3DSA:3.40.50.300 2 246 2.0E-65 T 11-10-2018 TP_0164 c2f0f7a2cc98bb3c123e71ece2d47367 266 SUPERFAMILY SSF52540 10 218 7.24E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0164 c2f0f7a2cc98bb3c123e71ece2d47367 266 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0164 c2f0f7a2cc98bb3c123e71ece2d47367 266 Pfam PF00005 ABC transporter 28 171 3.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0164 c2f0f7a2cc98bb3c123e71ece2d47367 266 SMART SM00382 35 219 6.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0582 6afd0903399b26dba139416019d158fe 495 Pfam PF12704 MacB-like periplasmic core domain 67 298 2.7E-7 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TP_0582 6afd0903399b26dba139416019d158fe 495 Pfam PF02687 FtsX-like permease family 357 486 8.4E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TP_0404 1ee42783278679e46718d92ce256992d 177 SUPERFAMILY SSF56281 1 169 8.98E-12 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TP_0404 1ee42783278679e46718d92ce256992d 177 Gene3D G3DSA:3.60.15.10 1 176 8.6E-9 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 SMART SM00963 1 86 7.1E-25 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 SMART SM00962 101 300 2.1E-92 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 Gene3D G3DSA:3.40.50.300 90 289 2.1E-106 T 11-10-2018 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 273 286 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 8.9E-14 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 1.7E-175 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 SUPERFAMILY SSF47446 302 431 4.45E-39 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 Gene3D G3DSA:1.10.260.30 311 432 7.0E-35 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 SUPERFAMILY SSF52540 42 359 1.06E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 Pfam PF00448 SRP54-type protein, GTPase domain 102 300 5.7E-66 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 Pfam PF02978 Signal peptide binding domain 333 429 1.8E-29 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 SMART SM00382 100 305 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0416 5a6cd05a6a4e7086b7f7e629df7c2530 452 Gene3D G3DSA:1.20.120.140 4 310 2.1E-106 T 11-10-2018 TP_0346 3d16eb7e4c9793c99c85d6a2caa74e48 233 ProDom PD415579 TP0346 PRECURSOR TP0697 TP0347 SIGNAL TP0698 TP0479 7 144 2.0E-76 T 11-10-2018 TP_0346 3d16eb7e4c9793c99c85d6a2caa74e48 233 Pfam PF10895 Domain of unknown function (DUF2715) 23 233 1.2E-50 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0426 247eb303a21439930ee7ff089ff934ac 589 Gene3D G3DSA:3.40.50.300 77 440 2.0E-153 T 11-10-2018 TP_0426 247eb303a21439930ee7ff089ff934ac 589 Gene3D G3DSA:2.40.50.100 119 191 2.0E-153 T 11-10-2018 TP_0426 247eb303a21439930ee7ff089ff934ac 589 Gene3D G3DSA:2.40.30.20 1 75 6.7E-11 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0426 247eb303a21439930ee7ff089ff934ac 589 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 88 209 4.3E-33 T 11-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0426 247eb303a21439930ee7ff089ff934ac 589 SUPERFAMILY SSF52540 176 444 2.31E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0426 247eb303a21439930ee7ff089ff934ac 589 Gene3D G3DSA:1.10.1140.10 442 579 5.1E-13 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0426 247eb303a21439930ee7ff089ff934ac 589 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 72 1.9E-9 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0426 247eb303a21439930ee7ff089ff934ac 589 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 3 577 45.002 T 11-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0426 247eb303a21439930ee7ff089ff934ac 589 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 220 440 6.9E-76 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0426 247eb303a21439930ee7ff089ff934ac 589 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 431 440 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0337 db711f2025c838e86232ca48c8a63bcf 285 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 53 80 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 TP_0337 db711f2025c838e86232ca48c8a63bcf 285 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 22 280 5.0E-79 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TP_0337 db711f2025c838e86232ca48c8a63bcf 285 SUPERFAMILY SSF53335 18 282 5.58E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0337 db711f2025c838e86232ca48c8a63bcf 285 Gene3D G3DSA:3.40.50.150 5 208 5.2E-48 T 11-10-2018 TP_0337 db711f2025c838e86232ca48c8a63bcf 285 Gene3D G3DSA:1.10.8.100 215 280 4.7E-15 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 TP_0337 db711f2025c838e86232ca48c8a63bcf 285 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 21 282 46.361 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TP_0337 db711f2025c838e86232ca48c8a63bcf 285 SMART SM00650 37 206 1.6E-63 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 TP_0337 db711f2025c838e86232ca48c8a63bcf 285 Pfam PF00398 Ribosomal RNA adenine dimethylase 22 279 6.3E-38 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TP_0356 212f31cea31f5be62a0d95affcf1a6fb 105 SUPERFAMILY SSF54928 19 100 1.75E-31 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 TP_0356 212f31cea31f5be62a0d95affcf1a6fb 105 Gene3D G3DSA:3.30.70.330 5 102 7.5E-31 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TP_0356 212f31cea31f5be62a0d95affcf1a6fb 105 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 21 91 3.3E-23 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 TP_0356 212f31cea31f5be62a0d95affcf1a6fb 105 SMART SM00360 20 93 1.3E-28 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 TP_0342 789bb4e35b7604b44a7a774377ecb2bb 186 Gene3D G3DSA:3.40.50.300 3 185 6.9E-35 T 11-10-2018 TP_0342 789bb4e35b7604b44a7a774377ecb2bb 186 SUPERFAMILY SSF52540 10 183 5.04E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0342 789bb4e35b7604b44a7a774377ecb2bb 186 TIGRFAM TIGR02173 cyt_kin_arch: putative cytidylate kinase 14 178 2.1E-33 T 11-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TP_0342 789bb4e35b7604b44a7a774377ecb2bb 186 Pfam PF13189 Cytidylate kinase-like family 79 164 1.9E-10 T 11-10-2018 TP_0342 789bb4e35b7604b44a7a774377ecb2bb 186 Hamap MF_00239 Cytidylate kinase [cmk]. 13 183 41.486 T 11-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TP_0885 f1a6deda4ea512259ebee2e83d65196a 146 SUPERFAMILY SSF51283 6 145 1.7E-41 T 11-10-2018 IPR036157 dUTPase-like superfamily TP_0885 f1a6deda4ea512259ebee2e83d65196a 146 Gene3D G3DSA:2.70.40.10 4 145 1.4E-42 T 11-10-2018 IPR036157 dUTPase-like superfamily TP_0885 f1a6deda4ea512259ebee2e83d65196a 146 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 2 145 30.772 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TP_0885 f1a6deda4ea512259ebee2e83d65196a 146 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 144 2.3E-50 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TP_0885 f1a6deda4ea512259ebee2e83d65196a 146 Pfam PF00692 dUTPase 13 144 4.3E-21 T 11-10-2018 IPR029054 dUTPase-like TP_0982 000f24c30c722b61a50949f22612a703 208 SUPERFAMILY SSF144091 10 193 6.8E-33 T 11-10-2018 TP_0982 000f24c30c722b61a50949f22612a703 208 SMART SM01160 44 141 0.0036 T 11-10-2018 TP_0982 000f24c30c722b61a50949f22612a703 208 Gene3D G3DSA:1.20.1540.10 6 198 6.6E-25 T 11-10-2018 IPR035952 Rhomboid-like superfamily TP_0982 000f24c30c722b61a50949f22612a703 208 Pfam PF01694 Rhomboid family 49 196 2.2E-32 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TP_0365 5489cd409f15dfade5f2fb06f4d409ea 154 Pfam PF13690 Chemotaxis phosphatase CheX 42 137 2.4E-17 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain TP_0365 5489cd409f15dfade5f2fb06f4d409ea 154 Gene3D G3DSA:3.40.1550.10 1 154 8.0E-39 T 11-10-2018 IPR028976 CheC-like superfamily TP_0365 5489cd409f15dfade5f2fb06f4d409ea 154 SUPERFAMILY SSF103039 1 150 4.58E-32 T 11-10-2018 IPR028976 CheC-like superfamily TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 17 352 1.6E-141 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 Pfam PF14841 FliG middle domain 133 207 2.8E-32 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 Gene3D G3DSA:1.10.220.30 213 352 7.5E-50 T 11-10-2018 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 SUPERFAMILY SSF48029 21 130 3.14E-21 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 Pfam PF14842 FliG N-terminal domain 23 125 3.5E-33 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 SUPERFAMILY SSF48029 132 343 4.58E-69 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 Gene3D G3DSA:1.10.220.30 121 212 3.6E-35 T 11-10-2018 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 Gene3D G3DSA:1.10.220.30 17 102 3.7E-19 T 11-10-2018 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 Pfam PF01706 FliG C-terminal domain 235 342 6.4E-43 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 PIRSF PIRSF003161 17 352 2.5E-117 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 290 316 3.3E-85 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 266 286 3.3E-85 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 52 78 3.3E-85 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 23 39 3.3E-85 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 213 238 3.3E-85 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 3.3E-85 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0400 693bb77ef757a7af6f16a34d0e6814fd 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 132 155 3.3E-85 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TP_0080 1e9c7f9fa92eb7b9213a84aa5c304af4 155 Gene3D G3DSA:3.10.20.30 1 75 4.5E-13 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TP_0080 1e9c7f9fa92eb7b9213a84aa5c304af4 155 SUPERFAMILY SSF47741 85 150 1.83E-17 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily TP_0080 1e9c7f9fa92eb7b9213a84aa5c304af4 155 Gene3D G3DSA:1.10.150.120 80 154 1.8E-14 T 11-10-2018 TP_0080 1e9c7f9fa92eb7b9213a84aa5c304af4 155 SUPERFAMILY SSF54292 2 75 3.87E-5 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TP_0080 1e9c7f9fa92eb7b9213a84aa5c304af4 155 Pfam PF01799 [2Fe-2S] binding domain 85 145 3.5E-15 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TP_0251 32d6b8f09a17aad2d4407a4aa73ad2fa 105 Pfam PF00216 Bacterial DNA-binding protein 7 94 6.8E-25 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TP_0251 32d6b8f09a17aad2d4407a4aa73ad2fa 105 SMART SM00411 6 95 6.4E-35 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TP_0251 32d6b8f09a17aad2d4407a4aa73ad2fa 105 Gene3D G3DSA:4.10.520.10 6 99 1.4E-25 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TP_0251 32d6b8f09a17aad2d4407a4aa73ad2fa 105 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 1.9E-7 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TP_0251 32d6b8f09a17aad2d4407a4aa73ad2fa 105 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 1.9E-7 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TP_0251 32d6b8f09a17aad2d4407a4aa73ad2fa 105 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 1.9E-7 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TP_0251 32d6b8f09a17aad2d4407a4aa73ad2fa 105 SUPERFAMILY SSF47729 7 98 1.62E-24 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TP_0171 0a5d49278d9c42de6981827ad289811e 142 PIRSF PIRSF036531 4 135 9.9E-50 T 11-10-2018 IPR017058 Major membrane immunogen, tpp15, predicted TP_0171 0a5d49278d9c42de6981827ad289811e 142 SMART SM00900 40 131 4.8E-7 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TP_0171 0a5d49278d9c42de6981827ad289811e 142 Gene3D G3DSA:3.90.1010.20 24 142 5.4E-33 T 11-10-2018 TP_0171 0a5d49278d9c42de6981827ad289811e 142 Pfam PF04205 FMN-binding domain 45 122 8.9E-6 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TP_0823 9f0cee91cbda5ec9b3a59c63446d805e 128 Gene3D G3DSA:2.60.40.730 41 128 1.3E-35 T 11-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 TP_0823 9f0cee91cbda5ec9b3a59c63446d805e 128 Gene3D G3DSA:2.30.30.510 1 40 1.2E-30 T 11-10-2018 TP_0823 9f0cee91cbda5ec9b3a59c63446d805e 128 Pfam PF01880 Desulfoferrodoxin 43 127 2.6E-23 T 11-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 TP_0823 9f0cee91cbda5ec9b3a59c63446d805e 128 SUPERFAMILY SSF49367 39 127 5.89E-29 T 11-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 TP_0823 9f0cee91cbda5ec9b3a59c63446d805e 128 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 42 127 3.4E-18 T 11-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 SUPERFAMILY SSF51735 123 289 5.31E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 8.9E-33 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 268 276 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 289 2.2E-64 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 282 6.5E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 247 263 6.5E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 6.5E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 206 235 6.5E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 6.5E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 6.5E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 6.5E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 291 36.524 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 Gene3D G3DSA:3.40.50.10860 8 284 1.0E-101 T 11-10-2018 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 SUPERFAMILY SSF53223 3 122 7.19E-33 T 11-10-2018 TP_0732 3041f302ea6821c32eb8217ca246f2e1 315 Gene3D G3DSA:3.40.50.720 6 267 1.0E-101 T 11-10-2018 TP_0345 06450bff53c07ea9cae2b50406223b94 363 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 26 360 17.457 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0345 06450bff53c07ea9cae2b50406223b94 363 ProSitePatterns PS01348 MraY family signature 2. 187 198 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0345 06450bff53c07ea9cae2b50406223b94 363 Pfam PF00953 Glycosyl transferase family 4 105 283 3.8E-26 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 TP_0569 4b1b226e406b77e7f311210787847c41 774 SUPERFAMILY SSF55920 421 674 2.36E-41 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like TP_0569 4b1b226e406b77e7f311210787847c41 774 Pfam PF16189 Creatinase/Prolidase N-terminal domain 187 335 1.2E-30 T 11-10-2018 TP_0569 4b1b226e406b77e7f311210787847c41 774 Gene3D G3DSA:3.40.350.10 180 312 7.8E-32 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TP_0569 4b1b226e406b77e7f311210787847c41 774 Pfam PF00557 Metallopeptidase family M24 429 673 2.2E-39 T 11-10-2018 IPR000994 Peptidase M24 TP_0569 4b1b226e406b77e7f311210787847c41 774 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 164 2.8E-16 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TP_0569 4b1b226e406b77e7f311210787847c41 774 SUPERFAMILY SSF53092 39 165 2.09E-12 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TP_0569 4b1b226e406b77e7f311210787847c41 774 Gene3D G3DSA:3.40.350.10 34 169 3.8E-30 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TP_0569 4b1b226e406b77e7f311210787847c41 774 SUPERFAMILY SSF53092 202 275 6.63E-6 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TP_0569 4b1b226e406b77e7f311210787847c41 774 Pfam PF16188 C-terminal region of peptidase_M24 715 774 4.7E-16 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 SUPERFAMILY SSF54849 137 203 1.95E-19 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 Gene3D G3DSA:3.50.7.10 191 371 1.2E-229 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 41.682 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 5.3E-97 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 SUPERFAMILY SSF52029 183 375 5.41E-83 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 Gene3D G3DSA:1.10.560.10 7 521 1.2E-229 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 Gene3D G3DSA:3.30.260.10 135 409 1.2E-229 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 PRINTS PR00298 60kDa chaperonin signature 82 109 1.1E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 PRINTS PR00298 60kDa chaperonin signature 397 418 1.1E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 PRINTS PR00298 60kDa chaperonin signature 349 374 1.1E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 PRINTS PR00298 60kDa chaperonin signature 267 290 1.1E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 PRINTS PR00298 60kDa chaperonin signature 26 52 1.1E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 SUPERFAMILY SSF48592 6 521 5.08E-72 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily TP_0030 2d03bfd539d3bb2ad6b733c747ae3bea 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 5.8E-257 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TP_0364 50b922e456292a6d0e24756f6d726572 455 PRINTS PR00996 Glutamate methyltransferase family signature 298 318 1.6E-6 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0364 50b922e456292a6d0e24756f6d726572 455 PRINTS PR00996 Glutamate methyltransferase family signature 412 435 1.6E-6 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0364 50b922e456292a6d0e24756f6d726572 455 Pfam PF01584 CheW-like domain 41 176 2.0E-33 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TP_0364 50b922e456292a6d0e24756f6d726572 455 Gene3D G3DSA:3.40.50.150 279 454 2.7E-22 T 11-10-2018 TP_0364 50b922e456292a6d0e24756f6d726572 455 Gene3D G3DSA:2.40.50.180 57 174 7.2E-36 T 11-10-2018 TP_0364 50b922e456292a6d0e24756f6d726572 455 SMART SM00138 205 453 8.0E-87 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0364 50b922e456292a6d0e24756f6d726572 455 Gene3D G3DSA:2.30.30.40 42 169 7.2E-36 T 11-10-2018 TP_0364 50b922e456292a6d0e24756f6d726572 455 Pfam PF01739 CheR methyltransferase, SAM binding domain 272 450 1.2E-45 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TP_0364 50b922e456292a6d0e24756f6d726572 455 SMART SM00260 36 175 1.9E-44 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TP_0364 50b922e456292a6d0e24756f6d726572 455 SUPERFAMILY SSF50341 39 176 3.01E-33 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TP_0364 50b922e456292a6d0e24756f6d726572 455 SUPERFAMILY SSF53335 272 449 1.41E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0591 409f73530503e5ad2f2c5b0bc22bfb9f 319 Gene3D G3DSA:3.40.50.300 130 312 5.3E-70 T 11-10-2018 TP_0591 409f73530503e5ad2f2c5b0bc22bfb9f 319 SUPERFAMILY SSF53795 131 297 9.77E-39 T 11-10-2018 TP_0591 409f73530503e5ad2f2c5b0bc22bfb9f 319 Pfam PF02603 HPr Serine kinase N terminus 9 126 5.7E-32 T 11-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 TP_0591 409f73530503e5ad2f2c5b0bc22bfb9f 319 SUPERFAMILY SSF75138 9 130 1.44E-31 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily TP_0591 409f73530503e5ad2f2c5b0bc22bfb9f 319 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 3.5E-70 T 11-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 TP_0591 409f73530503e5ad2f2c5b0bc22bfb9f 319 Gene3D G3DSA:3.40.1390.20 6 128 1.3E-32 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily TP_0591 409f73530503e5ad2f2c5b0bc22bfb9f 319 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 1 306 38.871 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 TP_0591 409f73530503e5ad2f2c5b0bc22bfb9f 319 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 11 301 1.2E-106 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 Gene3D G3DSA:3.40.50.1000 454 726 6.3E-79 T 11-10-2018 IPR023214 HAD superfamily TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 278 784 9.0E-141 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 Gene3D G3DSA:3.40.1110.10 484 607 6.3E-79 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 Gene3D G3DSA:3.30.70.100 1 83 9.6E-12 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 600 611 8.8E-29 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 698 710 8.8E-29 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 632 8.8E-29 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 323 337 8.8E-29 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 675 694 8.8E-29 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 473 487 8.8E-29 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 SUPERFAMILY SSF81653 285 373 5.75E-24 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 475 481 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 Pfam PF00702 haloacid dehalogenase-like hydrolase 470 689 3.8E-36 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 SUPERFAMILY SSF55008 1 74 1.1E-12 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 Gene3D G3DSA:2.70.150.20 237 376 2.2E-31 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 Pfam PF00122 E1-E2 ATPase 287 452 3.0E-46 T 11-10-2018 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 SUPERFAMILY SSF56784 471 782 2.58E-52 T 11-10-2018 IPR036412 HAD-like superfamily TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 SUPERFAMILY SSF81665 211 467 1.24E-8 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 Pfam PF00403 Heavy-metal-associated domain 6 69 4.3E-8 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 173 784 5.7E-166 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TP_1036 505ae8cfbcdcac4d5af17cd65769502a 792 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 277 752 3.5E-79 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TP_0660 98166445fa3408bbb3aecd5d4b1f046f 625 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 3.8E-6 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TP_0660 98166445fa3408bbb3aecd5d4b1f046f 625 PRINTS PR01005 Flagellar hook-associated protein signature 133 153 3.8E-6 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TP_0660 98166445fa3408bbb3aecd5d4b1f046f 625 PRINTS PR01005 Flagellar hook-associated protein signature 166 190 3.8E-6 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TP_0660 98166445fa3408bbb3aecd5d4b1f046f 625 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 576 621 8.2E-10 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TP_0660 98166445fa3408bbb3aecd5d4b1f046f 625 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 347 1.0E-72 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TP_0660 98166445fa3408bbb3aecd5d4b1f046f 625 Pfam PF07196 Flagellin hook IN motif 377 426 3.1E-7 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TP_0660 98166445fa3408bbb3aecd5d4b1f046f 625 SUPERFAMILY SSF64518 139 622 1.57E-21 T 11-10-2018 TP_0413 4f9133b675c202a1414d93e675b6cdb8 632 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 366 451 9.5E-6 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0413 4f9133b675c202a1414d93e675b6cdb8 632 Gene3D G3DSA:3.40.120.10 241 450 6.4E-10 T 11-10-2018 TP_0413 4f9133b675c202a1414d93e675b6cdb8 632 SUPERFAMILY SSF53738 27 164 1.27E-23 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0413 4f9133b675c202a1414d93e675b6cdb8 632 Gene3D G3DSA:3.40.120.10 28 180 3.6E-23 T 11-10-2018 TP_0413 4f9133b675c202a1414d93e675b6cdb8 632 Gene3D G3DSA:3.40.120.10 337 437 6.4E-10 T 11-10-2018 TP_0413 4f9133b675c202a1414d93e675b6cdb8 632 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 52 161 5.0E-22 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TP_0925 a74113bdf00acca4be949d66fee61704 146 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 TP_0925 a74113bdf00acca4be949d66fee61704 146 TIGRFAM TIGR01753 flav_short: flavodoxin 4 145 3.3E-49 T 11-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 TP_0925 a74113bdf00acca4be949d66fee61704 146 SUPERFAMILY SSF52218 3 145 2.84E-30 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TP_0925 a74113bdf00acca4be949d66fee61704 146 Pfam PF00258 Flavodoxin 6 139 5.7E-19 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 TP_0925 a74113bdf00acca4be949d66fee61704 146 Gene3D G3DSA:3.40.50.360 4 146 2.2E-30 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TP_0383 675ccbfefadc151345ec1fd773412e9c 149 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 149 43.27 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TP_0383 675ccbfefadc151345ec1fd773412e9c 149 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 6 147 6.8E-34 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TP_0383 675ccbfefadc151345ec1fd773412e9c 149 SUPERFAMILY SSF89447 5 139 1.78E-37 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily TP_0383 675ccbfefadc151345ec1fd773412e9c 149 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 8 135 3.0E-68 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TP_0383 675ccbfefadc151345ec1fd773412e9c 149 Gene3D G3DSA:2.40.330.20 2 148 1.7E-38 T 11-10-2018 IPR038619 MraZ superfamily TP_0383 675ccbfefadc151345ec1fd773412e9c 149 Pfam PF02381 MraZ protein, putative antitoxin-like 6 76 7.4E-24 T 11-10-2018 IPR020603 MraZ domain TP_0383 675ccbfefadc151345ec1fd773412e9c 149 Pfam PF02381 MraZ protein, putative antitoxin-like 79 146 6.0E-24 T 11-10-2018 IPR020603 MraZ domain TP_0827 9651fb0e72f1586a3efad4141a2a3ad2 425 Pfam PF07949 YbbR-like protein 241 310 8.5E-7 T 11-10-2018 IPR012505 YbbR-like TP_0827 9651fb0e72f1586a3efad4141a2a3ad2 425 Pfam PF07949 YbbR-like protein 148 212 2.2E-5 T 11-10-2018 IPR012505 YbbR-like TP_0827 9651fb0e72f1586a3efad4141a2a3ad2 425 Gene3D G3DSA:2.170.120.40 242 323 1.0E-6 T 11-10-2018 TP_0827 9651fb0e72f1586a3efad4141a2a3ad2 425 Gene3D G3DSA:2.170.120.30 328 419 3.5E-5 T 11-10-2018 TP_0827 9651fb0e72f1586a3efad4141a2a3ad2 425 Gene3D G3DSA:2.170.120.30 142 241 2.9E-13 T 11-10-2018 TP_0735 24d786580697bd558b15156769b0e6d0 518 SUPERFAMILY SSF46548 45 207 4.24E-33 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TP_0735 24d786580697bd558b15156769b0e6d0 518 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 74 184 6.5E-38 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TP_0735 24d786580697bd558b15156769b0e6d0 518 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 339 357 1.1E-21 T 11-10-2018 TP_0735 24d786580697bd558b15156769b0e6d0 518 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 456 1.1E-21 T 11-10-2018 TP_0735 24d786580697bd558b15156769b0e6d0 518 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 218 1.1E-21 T 11-10-2018 TP_0735 24d786580697bd558b15156769b0e6d0 518 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 1.1E-21 T 11-10-2018 TP_0735 24d786580697bd558b15156769b0e6d0 518 Gene3D G3DSA:1.10.1060.10 49 196 3.7E-39 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TP_0735 24d786580697bd558b15156769b0e6d0 518 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 66 514 7.7E-244 T 11-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 TP_0735 24d786580697bd558b15156769b0e6d0 518 SUPERFAMILY SSF51971 195 448 2.0E-63 T 11-10-2018 TP_0735 24d786580697bd558b15156769b0e6d0 518 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 389 405 1.0E-15 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0735 24d786580697bd558b15156769b0e6d0 518 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 335 359 1.0E-15 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0735 24d786580697bd558b15156769b0e6d0 518 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 495 514 1.0E-15 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0735 24d786580697bd558b15156769b0e6d0 518 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 220 1.0E-15 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TP_0735 24d786580697bd558b15156769b0e6d0 518 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 197 503 9.0E-37 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TP_0735 24d786580697bd558b15156769b0e6d0 518 Gene3D G3DSA:3.50.50.60 335 518 3.8E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0735 24d786580697bd558b15156769b0e6d0 518 Gene3D G3DSA:3.50.50.60 197 330 1.3E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TP_0221 f7d4dd1cec61a6c831258bf21f98d184 260 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 108 229 2.4E-37 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 TP_0221 f7d4dd1cec61a6c831258bf21f98d184 260 SUPERFAMILY SSF55166 100 236 4.71E-29 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TP_0221 f7d4dd1cec61a6c831258bf21f98d184 260 Gene3D G3DSA:3.30.1380.10 53 247 1.3E-50 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TP_1029 ccef5cca8e41b1ac65d7fe99983660ca 228 Pfam PF03880 DbpA RNA binding domain 123 192 9.9E-18 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain TP_1029 ccef5cca8e41b1ac65d7fe99983660ca 228 Gene3D G3DSA:3.30.70.330 122 196 2.4E-16 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TP_0223 3a559124e3bf97daa4e46983f2d3ba4b 435 SUPERFAMILY SSF53383 19 418 1.01E-42 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TP_0223 3a559124e3bf97daa4e46983f2d3ba4b 435 Gene3D G3DSA:3.40.640.10 2 305 5.0E-52 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TP_0223 3a559124e3bf97daa4e46983f2d3ba4b 435 Gene3D G3DSA:3.90.1150.10 315 426 6.0E-30 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TP_0223 3a559124e3bf97daa4e46983f2d3ba4b 435 Pfam PF00155 Aminotransferase class I and II 36 418 2.0E-21 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TP_0269 9dbf7e611d855fe14dc9df354928f71a 482 SUPERFAMILY SSF102114 187 433 1.44E-48 T 11-10-2018 TP_0269 9dbf7e611d855fe14dc9df354928f71a 482 Gene3D G3DSA:3.80.30.20 202 429 1.2E-66 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TP_0269 9dbf7e611d855fe14dc9df354928f71a 482 Pfam PF04055 Radical SAM superfamily 208 373 3.2E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TP_0269 9dbf7e611d855fe14dc9df354928f71a 482 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 472 9.1E-169 T 11-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 TP_0269 9dbf7e611d855fe14dc9df354928f71a 482 SMART SM00729 203 415 1.2E-43 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TP_0269 9dbf7e611d855fe14dc9df354928f71a 482 Gene3D G3DSA:3.40.50.12160 2 117 2.6E-13 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TP_0269 9dbf7e611d855fe14dc9df354928f71a 482 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 207 227 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TP_0269 9dbf7e611d855fe14dc9df354928f71a 482 Pfam PF00919 Uncharacterized protein family UPF0004 4 97 1.5E-16 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TP_0020 257737b4b73a113e8c07f4f0c6242d89 707 SUPERFAMILY SSF53300 38 188 1.85E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TP_0020 257737b4b73a113e8c07f4f0c6242d89 707 SMART SM00327 37 214 4.2E-14 T 11-10-2018 IPR002035 von Willebrand factor, type A TP_0020 257737b4b73a113e8c07f4f0c6242d89 707 Gene3D G3DSA:3.40.50.410 32 223 9.3E-10 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TP_0020 257737b4b73a113e8c07f4f0c6242d89 707 PIRSF PIRSF008381 1 707 0.0 T 11-10-2018 IPR011191 Uncharacterised protein family Treponema vWA TP_0020 257737b4b73a113e8c07f4f0c6242d89 707 Pfam PF00092 von Willebrand factor type A domain 39 210 3.2E-5 T 11-10-2018 IPR002035 von Willebrand factor, type A TP_0850 56ec6b903b771fa0b02fc0f8d90e2de3 179 Gene3D G3DSA:3.10.20.80 10 83 6.9E-29 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TP_0850 56ec6b903b771fa0b02fc0f8d90e2de3 179 SUPERFAMILY SSF54364 13 86 7.45E-27 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TP_0850 56ec6b903b771fa0b02fc0f8d90e2de3 179 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 92 176 1.8E-33 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 TP_0850 56ec6b903b771fa0b02fc0f8d90e2de3 179 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 TP_0850 56ec6b903b771fa0b02fc0f8d90e2de3 179 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 178 6.7E-60 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TP_0850 56ec6b903b771fa0b02fc0f8d90e2de3 179 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 82 3.8E-28 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TP_0850 56ec6b903b771fa0b02fc0f8d90e2de3 179 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 178 29.124 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TP_0850 56ec6b903b771fa0b02fc0f8d90e2de3 179 Gene3D G3DSA:3.30.110.10 84 179 1.7E-32 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TP_0850 56ec6b903b771fa0b02fc0f8d90e2de3 179 SUPERFAMILY SSF55200 92 179 3.01E-28 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TP_0295 049d9c5fc9db86ce2c275c9e0a0ee79a 414 Gene3D G3DSA:3.30.420.40 287 413 1.0E-16 T 11-10-2018 TP_0295 049d9c5fc9db86ce2c275c9e0a0ee79a 414 SUPERFAMILY SSF53067 300 404 4.75E-16 T 11-10-2018 TP_0295 049d9c5fc9db86ce2c275c9e0a0ee79a 414 SUPERFAMILY SSF53067 8 200 2.17E-20 T 11-10-2018 TP_0295 049d9c5fc9db86ce2c275c9e0a0ee79a 414 Gene3D G3DSA:3.30.420.40 3 95 3.1E-7 T 11-10-2018 TP_0295 049d9c5fc9db86ce2c275c9e0a0ee79a 414 Gene3D G3DSA:3.30.420.40 96 199 6.7E-7 T 11-10-2018 TP_0295 049d9c5fc9db86ce2c275c9e0a0ee79a 414 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 298 369 1.5E-6 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TP_0259 6b426a509e1d6d02e60d4238e9dd9d06 203 Gene3D G3DSA:3.10.350.10 91 158 2.6E-7 T 11-10-2018 IPR036779 LysM domain superfamily TP_0259 6b426a509e1d6d02e60d4238e9dd9d06 203 Pfam PF01476 LysM domain 97 148 8.4E-10 T 11-10-2018 IPR018392 LysM domain TP_0624 d16300a8bb41df36d78f2d9d9cae2f07 476 Pfam PF00691 OmpA family 372 467 3.9E-14 T 11-10-2018 IPR006665 OmpA-like domain TP_0624 d16300a8bb41df36d78f2d9d9cae2f07 476 SUPERFAMILY SSF103088 365 473 8.63E-24 T 11-10-2018 IPR036737 OmpA-like domain superfamily TP_0624 d16300a8bb41df36d78f2d9d9cae2f07 476 Gene3D G3DSA:3.30.1330.60 341 476 2.9E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily TP_1010 257b0f1919d991ab6fb46981617baa5b 149 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 32.619 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.4E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.4E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.4E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.4E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.4E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 SMART SM00562 3 140 5.2E-76 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 SUPERFAMILY SSF54919 1 142 3.8E-52 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 Pfam PF00334 Nucleoside diphosphate kinase 4 137 9.9E-50 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 Gene3D G3DSA:3.30.70.141 2 148 5.2E-52 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TP_1010 257b0f1919d991ab6fb46981617baa5b 149 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_0662 01f1152da4c5ad131715dcd6f94024c5 332 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 9 331 7.2E-77 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TP_0662 01f1152da4c5ad131715dcd6f94024c5 332 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 9 332 5.6E-119 T 11-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 TP_0662 01f1152da4c5ad131715dcd6f94024c5 332 SUPERFAMILY SSF51569 9 331 9.23E-92 T 11-10-2018 TP_0662 01f1152da4c5ad131715dcd6f94024c5 332 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 84 95 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TP_0662 01f1152da4c5ad131715dcd6f94024c5 332 Gene3D G3DSA:3.20.20.70 1 332 7.7E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0662 01f1152da4c5ad131715dcd6f94024c5 332 Pfam PF01116 Fructose-bisphosphate aldolase class-II 10 331 4.7E-95 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TP_0662 01f1152da4c5ad131715dcd6f94024c5 332 PIRSF PIRSF001359 7 332 1.1E-83 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TP_0143 1e75d8980eba375d7291b7e602959eee 593 SUPERFAMILY SSF161098 45 317 2.06E-31 T 11-10-2018 IPR035906 MetI-like superfamily TP_0143 1e75d8980eba375d7291b7e602959eee 593 Gene3D G3DSA:1.10.3720.10 347 589 5.3E-19 T 11-10-2018 IPR035906 MetI-like superfamily TP_0143 1e75d8980eba375d7291b7e602959eee 593 Gene3D G3DSA:1.10.3720.10 93 326 3.1E-37 T 11-10-2018 IPR035906 MetI-like superfamily TP_0143 1e75d8980eba375d7291b7e602959eee 593 SUPERFAMILY SSF161098 346 586 6.54E-26 T 11-10-2018 IPR035906 MetI-like superfamily TP_0143 1e75d8980eba375d7291b7e602959eee 593 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 308 3.8E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TP_0340 08d793c72bdc6b07713e8d9b8c957933 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 344 413 4.2E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TP_0340 08d793c72bdc6b07713e8d9b8c957933 490 TIGRFAM TIGR01499 folC: bifunctional protein FolC 65 480 9.0E-121 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TP_0340 08d793c72bdc6b07713e8d9b8c957933 490 SUPERFAMILY SSF53623 49 343 7.72E-73 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0340 08d793c72bdc6b07713e8d9b8c957933 490 Gene3D G3DSA:3.40.1190.10 35 343 1.9E-77 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TP_0340 08d793c72bdc6b07713e8d9b8c957933 490 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 184 199 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 TP_0340 08d793c72bdc6b07713e8d9b8c957933 490 SUPERFAMILY SSF53244 344 479 5.86E-16 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0340 08d793c72bdc6b07713e8d9b8c957933 490 Pfam PF08245 Mur ligase middle domain 87 322 6.0E-6 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TP_0340 08d793c72bdc6b07713e8d9b8c957933 490 Gene3D G3DSA:3.90.190.20 347 486 1.6E-19 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TP_0050 be45b0dbc8fb9457c7957e1572a34179 202 Gene3D G3DSA:3.40.50.2020 1 188 1.2E-20 T 11-10-2018 TP_0050 be45b0dbc8fb9457c7957e1572a34179 202 Pfam PF00156 Phosphoribosyl transferase domain 36 133 1.2E-7 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TP_0050 be45b0dbc8fb9457c7957e1572a34179 202 SUPERFAMILY SSF53271 3 169 4.46E-18 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 68 77 2.6E-22 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 260 270 2.6E-22 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 128 140 2.6E-22 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 140 154 2.6E-22 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 182 2.6E-22 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 192 204 2.6E-22 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 199 219 7.7E-63 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 89 109 7.7E-63 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 220 241 7.7E-63 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 244 269 7.7E-63 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 70 89 7.7E-63 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 128 7.7E-63 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 199 214 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 247 259 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 72 270 4.0E-90 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TP_0718 ae1e1ef508f9ab0fe340af373799e235 271 Pfam PF00813 FliP family 72 266 1.1E-71 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TP_0075 afa59bb2cf6c442b80077da534100911 296 SUPERFAMILY SSF161098 58 284 6.28E-59 T 11-10-2018 IPR035906 MetI-like superfamily TP_0075 afa59bb2cf6c442b80077da534100911 296 Gene3D G3DSA:1.10.3720.10 54 295 5.1E-67 T 11-10-2018 IPR035906 MetI-like superfamily TP_0075 afa59bb2cf6c442b80077da534100911 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 290 1.1E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TP_0145 94ea2b6808abc5e4c125e72d414770e7 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 11-10-2018 IPR020845 AMP-binding, conserved site TP_0145 94ea2b6808abc5e4c125e72d414770e7 656 Gene3D G3DSA:3.40.50.12780 3 326 3.4E-44 T 11-10-2018 TP_0145 94ea2b6808abc5e4c125e72d414770e7 656 SUPERFAMILY SSF56801 17 587 2.09E-103 T 11-10-2018 TP_0145 94ea2b6808abc5e4c125e72d414770e7 656 Pfam PF00501 AMP-binding enzyme 33 525 8.6E-102 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TP_0145 94ea2b6808abc5e4c125e72d414770e7 656 Gene3D G3DSA:3.40.50.12780 341 520 4.8E-40 T 11-10-2018 TP_0131 e90ceecc9013c6056f65db54e6bdafe8 598 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 400 598 1.5E-96 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0131 e90ceecc9013c6056f65db54e6bdafe8 598 Pfam PF02707 Major Outer Sheath Protein N-terminal region 84 278 1.2E-97 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_0117 e90ceecc9013c6056f65db54e6bdafe8 598 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 400 598 1.5E-96 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0117 e90ceecc9013c6056f65db54e6bdafe8 598 Pfam PF02707 Major Outer Sheath Protein N-terminal region 84 278 1.2E-97 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_0562 aa0edad23b992493a1796c6bff8b798f 378 Gene3D G3DSA:3.20.20.70 1 281 3.7E-68 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0562 aa0edad23b992493a1796c6bff8b798f 378 Gene3D G3DSA:3.90.1210.10 311 378 3.9E-5 T 11-10-2018 TP_0562 aa0edad23b992493a1796c6bff8b798f 378 Pfam PF03102 NeuB family 35 264 3.6E-48 T 11-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 TP_0562 aa0edad23b992493a1796c6bff8b798f 378 SUPERFAMILY SSF51569 2 269 7.03E-52 T 11-10-2018 TP_0562 aa0edad23b992493a1796c6bff8b798f 378 Pfam PF08666 SAF domain 313 364 1.1E-4 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TP_0154 495dd20b0d07e12638a9a7841341dbf7 345 SUPERFAMILY SSF55120 106 287 1.07E-33 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0154 495dd20b0d07e12638a9a7841341dbf7 345 SMART SM00363 30 90 2.7E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0154 495dd20b0d07e12638a9a7841341dbf7 345 Gene3D G3DSA:3.10.290.10 20 81 2.4E-7 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TP_0154 495dd20b0d07e12638a9a7841341dbf7 345 Pfam PF00849 RNA pseudouridylate synthase 113 248 5.6E-21 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0154 495dd20b0d07e12638a9a7841341dbf7 345 Gene3D G3DSA:3.30.2350.10 101 290 3.3E-30 T 11-10-2018 TP_0154 495dd20b0d07e12638a9a7841341dbf7 345 Pfam PF01479 S4 domain 30 76 7.1E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0807 5e7563d5ce67b261dc74dd3a94b22c54 62 SUPERFAMILY SSF57829 1 56 2.62E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TP_0807 5e7563d5ce67b261dc74dd3a94b22c54 62 Pfam PF01783 Ribosomal L32p protein family 2 57 3.1E-23 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0807 5e7563d5ce67b261dc74dd3a94b22c54 62 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 56 18.77 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0807 5e7563d5ce67b261dc74dd3a94b22c54 62 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 57 3.8E-26 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0407 1eb0917741d4f2bdc82356eb2cec1056 224 SUPERFAMILY SSF56784 1 197 1.24E-33 T 11-10-2018 IPR036412 HAD-like superfamily TP_0407 1eb0917741d4f2bdc82356eb2cec1056 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 183 9.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TP_0407 1eb0917741d4f2bdc82356eb2cec1056 224 Gene3D G3DSA:3.40.50.1000 1 199 7.4E-28 T 11-10-2018 IPR023214 HAD superfamily TP_0407 1eb0917741d4f2bdc82356eb2cec1056 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 70 188 8.5E-14 T 11-10-2018 TP_0393 19acc5d3c64439db09a985222b65c03a 302 Pfam PF02481 DNA recombination-mediator protein A 80 285 3.1E-70 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TP_0393 19acc5d3c64439db09a985222b65c03a 302 Gene3D G3DSA:3.40.50.450 2 295 1.3E-76 T 11-10-2018 TP_0393 19acc5d3c64439db09a985222b65c03a 302 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 294 8.5E-90 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TP_0393 19acc5d3c64439db09a985222b65c03a 302 SUPERFAMILY SSF102405 88 261 3.36E-34 T 11-10-2018 TP_0785 8ce6146a299b3f5e7907cb3c8f98d982 228 Gene3D G3DSA:2.60.450.10 39 156 4.0E-7 T 11-10-2018 TP_0785 8ce6146a299b3f5e7907cb3c8f98d982 228 Pfam PF03968 OstA-like protein 72 162 1.3E-5 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal TP_0936 0cff069b69cb42798cc5d6da26d1a627 357 SUPERFAMILY SSF56176 236 323 3.27E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TP_0936 0cff069b69cb42798cc5d6da26d1a627 357 Gene3D G3DSA:3.30.465.10 235 319 5.9E-21 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TP_0936 0cff069b69cb42798cc5d6da26d1a627 357 SMART SM01091 238 319 6.9E-20 T 11-10-2018 IPR005170 Transporter-associated domain TP_0936 0cff069b69cb42798cc5d6da26d1a627 357 SUPERFAMILY SSF54631 64 226 6.42E-15 T 11-10-2018 TP_0936 0cff069b69cb42798cc5d6da26d1a627 357 Pfam PF03471 Transporter associated domain 240 318 3.4E-16 T 11-10-2018 IPR005170 Transporter-associated domain TP_0307 b97dfb165c121da74d0df5fa017a0302 342 Gene3D G3DSA:3.30.10.20 35 100 1.7E-8 T 11-10-2018 TP_0307 b97dfb165c121da74d0df5fa017a0302 342 Pfam PF03793 PASTA domain 106 172 1.6E-9 T 11-10-2018 IPR005543 PASTA domain TP_0307 b97dfb165c121da74d0df5fa017a0302 342 Pfam PF03793 PASTA domain 41 100 1.7E-7 T 11-10-2018 IPR005543 PASTA domain TP_0307 b97dfb165c121da74d0df5fa017a0302 342 SMART SM00740 34 100 1.7E-10 T 11-10-2018 IPR005543 PASTA domain TP_0307 b97dfb165c121da74d0df5fa017a0302 342 SMART SM00740 101 172 2.5E-9 T 11-10-2018 IPR005543 PASTA domain TP_0307 b97dfb165c121da74d0df5fa017a0302 342 Gene3D G3DSA:3.30.10.20 103 175 2.2E-7 T 11-10-2018 TP_0076 0f06e73534b06929393d652bcb44cf79 273 SUPERFAMILY SSF161098 7 270 9.94E-64 T 11-10-2018 IPR035906 MetI-like superfamily TP_0076 0f06e73534b06929393d652bcb44cf79 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 266 1.6E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TP_0076 0f06e73534b06929393d652bcb44cf79 273 Gene3D G3DSA:1.10.3720.10 6 263 6.1E-58 T 11-10-2018 IPR035906 MetI-like superfamily TP_0461 a3aef8cb1c6d56d7161e487443bc1727 119 Gene3D G3DSA:1.10.260.40 21 89 5.7E-7 T 11-10-2018 TP_0461 a3aef8cb1c6d56d7161e487443bc1727 119 SUPERFAMILY SSF47413 21 89 1.07E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TP_0461 a3aef8cb1c6d56d7161e487443bc1727 119 SMART SM00530 27 82 1.6E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TP_0578 80be888b12a9175bbc1d05d338f6d280 295 SMART SM00962 90 292 2.0E-86 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0578 80be888b12a9175bbc1d05d338f6d280 295 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 265 278 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0578 80be888b12a9175bbc1d05d338f6d280 295 SUPERFAMILY SSF52540 90 292 2.83E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0578 80be888b12a9175bbc1d05d338f6d280 295 Gene3D G3DSA:1.20.120.140 4 288 2.2E-79 T 11-10-2018 TP_0578 80be888b12a9175bbc1d05d338f6d280 295 SMART SM00382 89 237 3.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0578 80be888b12a9175bbc1d05d338f6d280 295 Gene3D G3DSA:3.40.50.300 87 280 2.2E-79 T 11-10-2018 TP_0578 80be888b12a9175bbc1d05d338f6d280 295 SMART SM00963 1 78 1.2E-5 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0578 80be888b12a9175bbc1d05d338f6d280 295 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 23 289 4.4E-81 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TP_0578 80be888b12a9175bbc1d05d338f6d280 295 SUPERFAMILY SSF47364 7 76 2.09E-9 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 TP_0578 80be888b12a9175bbc1d05d338f6d280 295 Pfam PF00448 SRP54-type protein, GTPase domain 92 291 1.8E-67 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0578 80be888b12a9175bbc1d05d338f6d280 295 Pfam PF02881 SRP54-type protein, helical bundle domain 9 68 2.9E-6 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TP_0109 c7e66a333d5ff14b63126b719d2d1024 292 SUPERFAMILY SSF75217 121 279 9.81E-46 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TP_0109 c7e66a333d5ff14b63126b719d2d1024 292 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 40 275 9.5E-57 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 TP_0109 c7e66a333d5ff14b63126b719d2d1024 292 Pfam PF00588 SpoU rRNA Methylase family 132 271 6.6E-38 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TP_0109 c7e66a333d5ff14b63126b719d2d1024 292 Gene3D G3DSA:3.40.1280.10 111 292 1.8E-51 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TP_0691 b44539c3cabc1c5912e67194be0d9f4e 252 Pfam PF02616 Segregation and condensation protein ScpA 28 235 7.0E-24 T 11-10-2018 IPR003768 Segregation and condensation protein A TP_0602 16a22287d39807f932813304d93939f6 287 Pfam PF01148 Cytidylyltransferase family 6 282 2.3E-59 T 11-10-2018 TP_0550 b8ed4b2aad67c2e398b179a7f9bb29ae 495 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 495 27.273 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TP_0550 b8ed4b2aad67c2e398b179a7f9bb29ae 495 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 347 4.3E-84 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TP_0550 b8ed4b2aad67c2e398b179a7f9bb29ae 495 Gene3D G3DSA:3.30.1360.120 2 128 1.5E-34 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TP_0550 b8ed4b2aad67c2e398b179a7f9bb29ae 495 Pfam PF01926 50S ribosome-binding GTPase 225 322 6.4E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0550 b8ed4b2aad67c2e398b179a7f9bb29ae 495 Pfam PF10396 GTP-binding protein TrmE N-terminus 12 128 3.7E-28 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 TP_0550 b8ed4b2aad67c2e398b179a7f9bb29ae 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 342 1.4E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TP_0550 b8ed4b2aad67c2e398b179a7f9bb29ae 495 Pfam PF12631 MnmE helical domain 131 492 1.9E-32 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 TP_0550 b8ed4b2aad67c2e398b179a7f9bb29ae 495 SUPERFAMILY SSF52540 80 409 9.56E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0247 b2d602b9da69946049b9861a4ae8625a 357 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 128 341 9.2E-45 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TP_0247 b2d602b9da69946049b9861a4ae8625a 357 Gene3D G3DSA:3.30.457.10 39 112 3.5E-6 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily TP_0247 b2d602b9da69946049b9861a4ae8625a 357 SMART SM00646 199 341 1.5E-47 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TP_0247 b2d602b9da69946049b9861a4ae8625a 357 SUPERFAMILY SSF53187 128 344 1.04E-41 T 11-10-2018 TP_0247 b2d602b9da69946049b9861a4ae8625a 357 Gene3D G3DSA:3.40.630.40 117 348 5.8E-55 T 11-10-2018 TP_0247 b2d602b9da69946049b9861a4ae8625a 357 Pfam PF07833 Copper amine oxidase N-terminal domain 36 108 3.8E-9 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal TP_0247 b2d602b9da69946049b9861a4ae8625a 357 SUPERFAMILY SSF55383 38 122 9.42E-16 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily TP_0745 7cfae131a034c50ce98825fba6c3c107 105 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0745 7cfae131a034c50ce98825fba6c3c107 105 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 8.9E-28 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0745 7cfae131a034c50ce98825fba6c3c107 105 SUPERFAMILY SSF141091 2 102 1.22E-31 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0745 7cfae131a034c50ce98825fba6c3c107 105 Pfam PF00829 Ribosomal prokaryotic L21 protein 2 102 9.5E-31 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0745 7cfae131a034c50ce98825fba6c3c107 105 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 104 22.095 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0304 38419f6ca11a94e8be8825ab7dcd6507 1039 SUPERFAMILY SSF82171 340 500 1.79E-9 T 11-10-2018 TP_0860 4c5b5a5b98da6a23b7cea3f31e6e844a 240 Pfam PF03687 Uncharacterised protein family (UPF0164) 1 143 1.5E-52 T 11-10-2018 IPR005362 Uncharacterised protein family UPF0164 TP_0234 13c9703b81f8b7b39ae807e48623893b 56 SUPERFAMILY SSF57829 5 54 1.16E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TP_0234 13c9703b81f8b7b39ae807e48623893b 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 5.3E-28 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0234 13c9703b81f8b7b39ae807e48623893b 56 Gene3D G3DSA:2.20.28.120 1 55 8.4E-21 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0234 13c9703b81f8b7b39ae807e48623893b 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0234 13c9703b81f8b7b39ae807e48623893b 56 Pfam PF00471 Ribosomal protein L33 9 54 6.1E-21 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0234 13c9703b81f8b7b39ae807e48623893b 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 17.77 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 703 725 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 237 312 1.1E-17 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 SUPERFAMILY SSF48168 111 315 1.83E-49 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 530 541 3.3E-46 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 392 411 3.3E-46 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 625 647 3.3E-46 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 714 741 3.3E-46 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 587 610 3.3E-46 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 PRINTS PR01183 Ribonucleotide reductase large chain signature 653 676 3.3E-46 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 Pfam PF02867 Ribonucleotide reductase, barrel domain 317 829 3.4E-141 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 Pfam PF03477 ATP cone domain 1 95 2.4E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 SUPERFAMILY SSF51998 316 834 1.25E-165 T 11-10-2018 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 243 833 1.1E-181 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TP_1008 db86ba3d2eee88f519976fca13370fc9 845 Gene3D G3DSA:3.20.70.20 172 838 1.3E-189 T 11-10-2018 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 SUPERFAMILY SSF52374 1 328 1.8E-81 T 11-10-2018 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 Gene3D G3DSA:1.10.240.10 182 296 1.2E-112 T 11-10-2018 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 Gene3D G3DSA:3.40.50.620 4 323 1.2E-112 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.8E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 2.8E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 2.8E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 2.8E-25 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 329 37.058 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 Pfam PF00579 tRNA synthetases class I (W and Y) 2 284 7.0E-78 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0632 d46922a9182981c3522ed4e41c8fb39a 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 328 2.0E-92 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TP_0832 a05f1c18053b14d2cf66607245706a7a 271 Pfam PF10646 Sporulation and spore germination 144 251 5.3E-17 T 11-10-2018 IPR019606 GerMN domain TP_0832 a05f1c18053b14d2cf66607245706a7a 271 SMART SM00909 165 256 1.1E-25 T 11-10-2018 IPR019606 GerMN domain TP_0832 a05f1c18053b14d2cf66607245706a7a 271 PIRSF PIRSF027936 1 271 1.8E-155 T 11-10-2018 IPR016862 Uncharacterised conserved protein UCP027936 TP_0491 594d5bcc1488c56daf111977ce12be64 344 Pfam PF02618 YceG-like family 53 320 2.9E-64 T 11-10-2018 IPR003770 Endolytic murein transglycosylase TP_0491 594d5bcc1488c56daf111977ce12be64 344 Gene3D G3DSA:1.10.8.1150 48 118 3.7E-8 T 11-10-2018 TP_0491 594d5bcc1488c56daf111977ce12be64 344 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 28 343 24.228 T 11-10-2018 IPR003770 Endolytic murein transglycosylase TP_0491 594d5bcc1488c56daf111977ce12be64 344 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 39 319 1.2E-64 T 11-10-2018 IPR003770 Endolytic murein transglycosylase TP_0023 19049792e7ff40694522b3d9380903e9 443 SUPERFAMILY SSF161070 8 439 2.62E-98 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 TP_0023 19049792e7ff40694522b3d9380903e9 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 1.0E-9 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TP_0023 19049792e7ff40694522b3d9380903e9 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 304 323 1.0E-9 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TP_0023 19049792e7ff40694522b3d9380903e9 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 1.0E-9 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TP_0023 19049792e7ff40694522b3d9380903e9 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 379 399 1.0E-9 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TP_0023 19049792e7ff40694522b3d9380903e9 443 Pfam PF00209 Sodium:neurotransmitter symporter family 149 438 8.4E-20 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TP_0023 19049792e7ff40694522b3d9380903e9 443 Pfam PF00209 Sodium:neurotransmitter symporter family 8 137 2.7E-17 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TP_0849 c44b173a4b4f4a9ba15349314f53ed24 66 Gene3D G3DSA:2.40.50.530 1 66 2.9E-19 T 11-10-2018 TP_0849 c44b173a4b4f4a9ba15349314f53ed24 66 SUPERFAMILY SSF143034 3 62 1.44E-18 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0849 c44b173a4b4f4a9ba15349314f53ed24 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0849 c44b173a4b4f4a9ba15349314f53ed24 66 Pfam PF01632 Ribosomal protein L35 3 60 1.7E-19 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0849 c44b173a4b4f4a9ba15349314f53ed24 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 3 65 8.4E-24 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TP_0849 c44b173a4b4f4a9ba15349314f53ed24 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.2E-17 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TP_0849 c44b173a4b4f4a9ba15349314f53ed24 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.2E-17 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TP_0849 c44b173a4b4f4a9ba15349314f53ed24 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.2E-17 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TP_0849 c44b173a4b4f4a9ba15349314f53ed24 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.668 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TP_0458 5c8e5a8d217d67a54ddd95aa75eccdf6 192 Gene3D G3DSA:1.10.10.10 92 189 6.7E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0458 5c8e5a8d217d67a54ddd95aa75eccdf6 192 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 19 187 3.9E-29 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TP_0458 5c8e5a8d217d67a54ddd95aa75eccdf6 192 PIRSF PIRSF019345 8 189 3.5E-38 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TP_0458 5c8e5a8d217d67a54ddd95aa75eccdf6 192 SUPERFAMILY SSF46785 98 171 1.09E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TP_0458 5c8e5a8d217d67a54ddd95aa75eccdf6 192 Pfam PF04079 Segregation and condensation complex subunit ScpB 19 180 4.1E-45 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Gene3D G3DSA:1.25.40.20 434 532 5.8E-16 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SUPERFAMILY SSF48403 39 323 3.67E-49 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SUPERFAMILY SSF48403 242 597 1.03E-62 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Pfam PF00023 Ankyrin repeat 545 575 0.0051 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Gene3D G3DSA:1.25.40.20 640 770 9.1E-30 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 614 643 1200.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 382 411 1.1 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 446 476 33.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 781 811 0.18 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 544 573 0.023 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 685 714 1.6 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 194 227 1200.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 718 747 0.082 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 314 344 180.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 577 607 120.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 99 128 0.91 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 815 844 1.9 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 281 310 0.0012 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 66 95 0.02 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 348 378 0.23 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 480 509 0.16 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 161 191 0.4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 652 681 6.3E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 248 277 7.3E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SMART SM00248 878 908 800.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Gene3D G3DSA:1.25.40.20 771 934 2.1E-24 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Gene3D G3DSA:1.25.40.20 533 639 1.4E-18 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Gene3D G3DSA:1.25.40.20 149 325 7.7E-35 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Gene3D G3DSA:1.25.40.20 21 148 4.1E-23 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Pfam PF12796 Ankyrin repeats (3 copies) 650 716 1.8E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Pfam PF12796 Ankyrin repeats (3 copies) 240 312 5.8E-11 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Pfam PF12796 Ankyrin repeats (3 copies) 71 150 2.1E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Pfam PF12796 Ankyrin repeats (3 copies) 774 842 2.0E-7 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Pfam PF12796 Ankyrin repeats (3 copies) 427 509 4.8E-8 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 SUPERFAMILY SSF48403 532 898 2.41E-49 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0835 80df92f83e0ae1c0af6c86b94edd5cc8 934 Gene3D G3DSA:1.25.40.20 327 433 6.0E-23 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0962 37a41f1b2efd9fd2e8e9754d9b214491 410 Pfam PF12704 MacB-like periplasmic core domain 19 249 3.2E-24 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TP_0962 37a41f1b2efd9fd2e8e9754d9b214491 410 Pfam PF02687 FtsX-like permease family 311 404 9.5E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TP_0352 651f0c34d20680a7286a923cae09d83d 85 Gene3D G3DSA:2.30.31.70 9 83 1.4E-27 T 11-10-2018 TP_0352 651f0c34d20680a7286a923cae09d83d 85 PIRSF PIRSF037246 2 82 5.9E-39 T 11-10-2018 IPR017154 Uncharacterised conserved protein UCP037246 TP_0352 651f0c34d20680a7286a923cae09d83d 85 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 30 75 2.7E-7 T 11-10-2018 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0006355 TP_0879 913be4f282b0263855d0dec4ede621e4 493 Pfam PF09822 ABC-type uncharacterized transport system 29 286 2.7E-36 T 11-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 TP_0115 dfe2bc18054888c382498ff7440fc3b8 269 Gene3D G3DSA:3.40.1190.20 1 266 2.2E-71 T 11-10-2018 IPR029056 Ribokinase-like TP_0115 dfe2bc18054888c382498ff7440fc3b8 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 259 2.3E-65 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TP_0115 dfe2bc18054888c382498ff7440fc3b8 269 SUPERFAMILY SSF53613 3 261 2.34E-61 T 11-10-2018 IPR029056 Ribokinase-like TP_0115 dfe2bc18054888c382498ff7440fc3b8 269 Pfam PF08543 Phosphomethylpyrimidine kinase 11 258 2.3E-74 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 TP_0292 c4a6f5d999ca544ec8fd63c1a7e4f2bd 417 PRINTS PR01021 OMPA domain signature 313 335 8.9E-6 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TP_0292 c4a6f5d999ca544ec8fd63c1a7e4f2bd 417 PRINTS PR01021 OMPA domain signature 358 374 8.9E-6 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TP_0292 c4a6f5d999ca544ec8fd63c1a7e4f2bd 417 PRINTS PR01021 OMPA domain signature 343 358 8.9E-6 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TP_0292 c4a6f5d999ca544ec8fd63c1a7e4f2bd 417 Gene3D G3DSA:3.30.1330.60 280 417 6.5E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily TP_0292 c4a6f5d999ca544ec8fd63c1a7e4f2bd 417 ProSitePatterns PS01068 OmpA-like domain. 345 390 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 TP_0292 c4a6f5d999ca544ec8fd63c1a7e4f2bd 417 SUPERFAMILY SSF103088 305 414 1.44E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily TP_0292 c4a6f5d999ca544ec8fd63c1a7e4f2bd 417 Pfam PF00691 OmpA family 313 408 1.2E-18 T 11-10-2018 IPR006665 OmpA-like domain TP_0427 f7b0179e505a2ab90bf04f736d32c331 430 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 430 44.596 T 11-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0427 f7b0179e505a2ab90bf04f736d32c331 430 SUPERFAMILY SSF52540 76 334 8.63E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0427 f7b0179e505a2ab90bf04f736d32c331 430 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 319 1.0E-44 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0427 f7b0179e505a2ab90bf04f736d32c331 430 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 71 1.9E-9 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TP_0427 f7b0179e505a2ab90bf04f736d32c331 430 Gene3D G3DSA:3.40.50.12240 13 430 9.9E-105 T 11-10-2018 TP_0438 84a985ab7d4e12e0d9ee79e9aec1b9c1 269 Hamap MF_01405 dITP/XTP pyrophosphatase. 16 207 40.515 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 TP_0438 84a985ab7d4e12e0d9ee79e9aec1b9c1 269 Gene3D G3DSA:3.90.950.10 16 209 6.6E-60 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TP_0438 84a985ab7d4e12e0d9ee79e9aec1b9c1 269 SUPERFAMILY SSF52972 7 205 3.66E-55 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TP_0438 84a985ab7d4e12e0d9ee79e9aec1b9c1 269 Pfam PF01725 Ham1 family 18 203 4.9E-47 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TP_0822 2bf481b9cdd523ff80909e5c36d92501 301 Gene3D G3DSA:2.30.30.60 142 190 3.7E-13 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TP_0822 2bf481b9cdd523ff80909e5c36d92501 301 SUPERFAMILY SSF82689 194 290 5.23E-26 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TP_0822 2bf481b9cdd523ff80909e5c36d92501 301 SUPERFAMILY SSF50182 126 191 2.58E-15 T 11-10-2018 IPR010920 LSM domain superfamily TP_0822 2bf481b9cdd523ff80909e5c36d92501 301 SUPERFAMILY SSF82861 44 124 2.75E-12 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TP_0822 2bf481b9cdd523ff80909e5c36d92501 301 Pfam PF00924 Mechanosensitive ion channel 83 279 2.1E-56 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TP_0822 2bf481b9cdd523ff80909e5c36d92501 301 Gene3D G3DSA:3.30.70.100 192 285 1.6E-22 T 11-10-2018 TP_0888 0bfb29757a0e18634f41707ebded560c 275 Pfam PF06574 FAD synthetase 16 172 3.4E-37 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TP_0888 0bfb29757a0e18634f41707ebded560c 275 SUPERFAMILY SSF52374 22 180 1.13E-16 T 11-10-2018 TP_0888 0bfb29757a0e18634f41707ebded560c 275 Gene3D G3DSA:3.40.50.620 10 193 1.3E-34 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 SUPERFAMILY SSF54106 361 404 4.05E-8 T 11-10-2018 TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 SUPERFAMILY SSF54106 309 355 3.01E-6 T 11-10-2018 TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 SMART SM00257 361 404 4.9E-12 T 11-10-2018 IPR018392 LysM domain TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 SMART SM00257 310 355 7.4E-12 T 11-10-2018 IPR018392 LysM domain TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 Gene3D G3DSA:2.70.70.10 406 546 3.1E-47 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 Gene3D G3DSA:3.10.350.10 304 360 8.1E-11 T 11-10-2018 IPR036779 LysM domain superfamily TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 SUPERFAMILY SSF51261 416 544 1.31E-53 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 Pfam PF01551 Peptidase family M23 446 540 2.7E-30 T 11-10-2018 IPR016047 Peptidase M23 TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 Pfam PF01476 LysM domain 362 404 2.5E-9 T 11-10-2018 IPR018392 LysM domain TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 Pfam PF01476 LysM domain 311 355 4.5E-9 T 11-10-2018 IPR018392 LysM domain TP_0864 d84b2ac021846dcfc7fee63272bd29c6 546 Gene3D G3DSA:3.10.350.10 361 405 7.5E-11 T 11-10-2018 IPR036779 LysM domain superfamily TP_0107 8c17fa24097c92076111897bbba00710 525 Pfam PF12804 MobA-like NTP transferase domain 1 86 6.0E-10 T 11-10-2018 IPR025877 MobA-like NTP transferase TP_0107 8c17fa24097c92076111897bbba00710 525 PIRSF PIRSF037383 1 516 8.7E-253 T 11-10-2018 IPR017190 Bifunctional CTP:phosphocholine cytidylyltransferase/choline kinase TP_0107 8c17fa24097c92076111897bbba00710 525 SUPERFAMILY SSF53448 1 244 1.04E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TP_0107 8c17fa24097c92076111897bbba00710 525 SUPERFAMILY SSF56112 227 506 4.39E-35 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TP_0107 8c17fa24097c92076111897bbba00710 525 Gene3D G3DSA:3.90.1200.10 319 522 1.4E-49 T 11-10-2018 TP_0107 8c17fa24097c92076111897bbba00710 525 Gene3D G3DSA:3.30.200.20 223 317 1.7E-18 T 11-10-2018 TP_0107 8c17fa24097c92076111897bbba00710 525 Gene3D G3DSA:3.90.550.10 1 219 1.4E-49 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TP_0107 8c17fa24097c92076111897bbba00710 525 Pfam PF01636 Phosphotransferase enzyme family 246 454 6.3E-13 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 SMART SM00316 618 688 6.8E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 7.6E-13 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 SUPERFAMILY SSF54211 294 486 2.94E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 691 28.382 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 PIRSF PIRSF005499 1 700 1.5E-292 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 SUPERFAMILY SSF54791 553 638 4.07E-18 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Gene3D G3DSA:3.30.230.70 238 548 9.1E-106 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 SMART SM00322 550 615 5.5E-10 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 SUPERFAMILY SSF55666 143 233 1.54E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 687 3.5E-282 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 SUPERFAMILY SSF50249 613 689 8.95E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 318 2.2E-20 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Pfam PF00575 S1 RNA binding domain 617 686 3.2E-17 T 11-10-2018 IPR003029 S1 domain GO:0003676 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Gene3D G3DSA:2.40.50.140 620 690 4.4E-24 T 11-10-2018 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 SUPERFAMILY SSF54211 7 142 4.3E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 SUPERFAMILY SSF55666 448 544 8.55E-26 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Pfam PF01138 3' exoribonuclease family, domain 1 14 142 5.2E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Pfam PF01138 3' exoribonuclease family, domain 1 323 454 4.0E-21 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Pfam PF00013 KH domain 554 609 1.1E-8 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Gene3D G3DSA:3.30.230.70 1 228 1.1E-72 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 Gene3D G3DSA:3.30.1370.10 549 619 7.2E-14 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TP_0886 9fad6e65525a9019e18621a5f0b5aa31 702 SUPERFAMILY SSF46915 242 319 4.97E-13 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TP_0560 1868453bef8bb00f8994b5ce641deb87 661 SUPERFAMILY SSF52922 541 661 1.03E-22 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TP_0560 1868453bef8bb00f8994b5ce641deb87 661 Gene3D G3DSA:3.40.50.970 338 536 6.4E-68 T 11-10-2018 TP_0560 1868453bef8bb00f8994b5ce641deb87 661 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TP_0560 1868453bef8bb00f8994b5ce641deb87 661 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 656 3.5E-221 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 TP_0560 1868453bef8bb00f8994b5ce641deb87 661 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 328 1.7E-132 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TP_0560 1868453bef8bb00f8994b5ce641deb87 661 SMART SM00861 355 526 3.0E-59 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TP_0560 1868453bef8bb00f8994b5ce641deb87 661 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TP_0560 1868453bef8bb00f8994b5ce641deb87 661 Gene3D G3DSA:3.40.50.920 542 661 1.0E-23 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TP_0560 1868453bef8bb00f8994b5ce641deb87 661 Gene3D G3DSA:3.40.50.970 3 332 1.1E-109 T 11-10-2018 TP_0560 1868453bef8bb00f8994b5ce641deb87 661 Pfam PF02779 Transketolase, pyrimidine binding domain 354 525 3.2E-44 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TP_0560 1868453bef8bb00f8994b5ce641deb87 661 SUPERFAMILY SSF52518 3 327 5.05E-101 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TP_0560 1868453bef8bb00f8994b5ce641deb87 661 SUPERFAMILY SSF52518 345 527 1.27E-62 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TP_0540 8296a122d0633cc5a56651b1102dad4d 123 SUPERFAMILY SSF52091 3 112 1.43E-28 T 11-10-2018 IPR036513 STAS domain superfamily TP_0540 8296a122d0633cc5a56651b1102dad4d 123 Gene3D G3DSA:3.30.750.24 2 115 1.7E-27 T 11-10-2018 IPR036513 STAS domain superfamily TP_0540 8296a122d0633cc5a56651b1102dad4d 123 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 107 2.1E-31 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TP_0540 8296a122d0633cc5a56651b1102dad4d 123 Pfam PF01740 STAS domain 6 108 1.8E-18 T 11-10-2018 IPR002645 STAS domain TP_0684 82918edb02251d5a493d29285e8a169d 403 Gene3D G3DSA:3.40.50.2300 36 260 2.6E-44 T 11-10-2018 TP_0684 82918edb02251d5a493d29285e8a169d 403 Pfam PF13407 Periplasmic binding protein domain 59 260 2.7E-23 T 11-10-2018 IPR025997 Periplasmic binding protein TP_0684 82918edb02251d5a493d29285e8a169d 403 SUPERFAMILY SSF53822 35 306 3.0E-31 T 11-10-2018 IPR028082 Periplasmic binding protein-like I TP_0684 82918edb02251d5a493d29285e8a169d 403 Gene3D G3DSA:3.40.50.2300 72 240 2.6E-44 T 11-10-2018 TP_0958 39500bbad8c610463a02c2b74aca2a4a 632 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 220 627 8.7E-63 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TP_0958 39500bbad8c610463a02c2b74aca2a4a 632 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 62 167 1.8E-15 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TP_0958 39500bbad8c610463a02c2b74aca2a4a 632 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 229 631 1.4E-129 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TP_0858 77d5237788942644fef8e8826f4199b0 408 Pfam PF03687 Uncharacterised protein family (UPF0164) 16 371 7.8E-139 T 11-10-2018 IPR005362 Uncharacterised protein family UPF0164 TP_0826 e19649222ddab608ef34c19f56d8b3c6 273 Hamap MF_01499 Diadenylate cyclase [dacA]. 2 253 27.912 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 TP_0826 e19649222ddab608ef34c19f56d8b3c6 273 PIRSF PIRSF004793 5 267 2.2E-88 T 11-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 TP_0826 e19649222ddab608ef34c19f56d8b3c6 273 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 118 234 3.1E-36 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal TP_0826 e19649222ddab608ef34c19f56d8b3c6 273 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 14 249 7.1E-64 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 TP_0826 e19649222ddab608ef34c19f56d8b3c6 273 Gene3D G3DSA:3.40.1700.10 102 254 6.0E-48 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily TP_0826 e19649222ddab608ef34c19f56d8b3c6 273 SUPERFAMILY SSF143597 43 238 6.02E-55 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily TP_0157 8db5be1a5f7ce9711d853807ba78905b 300 SUPERFAMILY SSF69593 3 266 2.48E-40 T 11-10-2018 TP_0157 8db5be1a5f7ce9711d853807ba78905b 300 Pfam PF01553 Acyltransferase 69 193 1.4E-5 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TP_0157 8db5be1a5f7ce9711d853807ba78905b 300 Gene3D G3DSA:3.40.1130.10 41 208 7.4E-7 T 11-10-2018 TP_0157 8db5be1a5f7ce9711d853807ba78905b 300 SMART SM00563 77 221 2.2E-10 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TP_0270 0a3545143aa5b2127ada36cacded6233 478 Gene3D G3DSA:3.30.460.10 8 145 2.5E-44 T 11-10-2018 TP_0270 0a3545143aa5b2127ada36cacded6233 478 Pfam PF01743 Poly A polymerase head domain 24 144 6.0E-40 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TP_0270 0a3545143aa5b2127ada36cacded6233 478 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 310 467 2.6E-15 T 11-10-2018 IPR032810 CCA-adding enzyme, C-terminal TP_0270 0a3545143aa5b2127ada36cacded6233 478 Gene3D G3DSA:1.10.3090.10 146 461 6.9E-46 T 11-10-2018 TP_0270 0a3545143aa5b2127ada36cacded6233 478 SUPERFAMILY SSF81301 6 142 7.74E-40 T 11-10-2018 TP_0270 0a3545143aa5b2127ada36cacded6233 478 SUPERFAMILY SSF81891 144 472 4.58E-54 T 11-10-2018 TP_0270 0a3545143aa5b2127ada36cacded6233 478 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 173 233 2.3E-19 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TP_0500 2260b3705f6543052463f72faf43cb4a 624 Gene3D G3DSA:3.40.710.10 243 607 4.0E-93 T 11-10-2018 TP_0500 2260b3705f6543052463f72faf43cb4a 624 Gene3D G3DSA:3.90.1310.10 59 235 2.2E-40 T 11-10-2018 TP_0500 2260b3705f6543052463f72faf43cb4a 624 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 15 597 3.5E-192 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TP_0500 2260b3705f6543052463f72faf43cb4a 624 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 231 2.9E-44 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TP_0500 2260b3705f6543052463f72faf43cb4a 624 SUPERFAMILY SSF56601 248 578 5.07E-83 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TP_0500 2260b3705f6543052463f72faf43cb4a 624 Pfam PF00905 Penicillin binding protein transpeptidase domain 265 572 4.3E-64 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TP_0500 2260b3705f6543052463f72faf43cb4a 624 SUPERFAMILY SSF56519 54 247 1.11E-43 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TP_0500 2260b3705f6543052463f72faf43cb4a 624 Gene3D G3DSA:3.30.1390.30 81 157 2.2E-40 T 11-10-2018 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 Gene3D G3DSA:2.40.10.10 51 165 2.4E-27 T 11-10-2018 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 SMART SM00228 282 383 1.7E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 SUPERFAMILY SSF50494 72 279 5.59E-58 T 11-10-2018 IPR009003 Peptidase S1, PA clan TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 SUPERFAMILY SSF50156 241 382 3.43E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 Pfam PF13365 Trypsin-like peptidase domain 105 243 4.4E-33 T 11-10-2018 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 Pfam PF13180 PDZ domain 304 392 1.3E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 PRINTS PR00834 HtrA/DegQ protease family signature 341 353 5.8E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 PRINTS PR00834 HtrA/DegQ protease family signature 135 155 5.8E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 PRINTS PR00834 HtrA/DegQ protease family signature 178 202 5.8E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 PRINTS PR00834 HtrA/DegQ protease family signature 114 126 5.8E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 PRINTS PR00834 HtrA/DegQ protease family signature 214 231 5.8E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 5.8E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 Gene3D G3DSA:2.30.42.10 289 398 2.1E-22 T 11-10-2018 TP_0773 56231bc20a5abed28de5af08e37ea7d8 398 Gene3D G3DSA:2.40.10.10 169 281 6.4E-41 T 11-10-2018 TP_0776 7566a8a9f0c2cb3bf45bbc596593b7b1 258 SUPERFAMILY SSF53271 89 252 1.2E-12 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TP_0776 7566a8a9f0c2cb3bf45bbc596593b7b1 258 Gene3D G3DSA:3.40.50.2020 157 257 2.1E-9 T 11-10-2018 TP_0561 21d99b8ed10a5dabae1b2c7951b7f054 283 Pfam PF04536 TPM domain 74 180 1.4E-24 T 11-10-2018 IPR007621 TPM domain TP_0561 21d99b8ed10a5dabae1b2c7951b7f054 283 Gene3D G3DSA:3.10.310.50 22 190 6.6E-34 T 11-10-2018 TP_0317 5d040523ba30a74bd8f6855e38051108 756 Pfam PF02707 Major Outer Sheath Protein N-terminal region 96 288 7.9E-98 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_0317 5d040523ba30a74bd8f6855e38051108 756 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 553 756 1.8E-91 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0486 50942ddfe2f2dafb6a9853755328bfc5 484 Pfam PF05262 Borrelia P83/100 protein 23 473 6.2E-215 T 11-10-2018 IPR007926 Borrelia P83100 TP_0290 49005afc4355b47bc72efe14d014569b 277 ProSitePatterns PS01229 Hypothetical cof family signature 2. 224 246 - T 11-10-2018 TP_0290 49005afc4355b47bc72efe14d014569b 277 Gene3D G3DSA:3.30.1240.10 87 199 1.4E-69 T 11-10-2018 TP_0290 49005afc4355b47bc72efe14d014569b 277 SUPERFAMILY SSF56784 5 273 2.42E-68 T 11-10-2018 IPR036412 HAD-like superfamily TP_0290 49005afc4355b47bc72efe14d014569b 277 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 270 4.1E-62 T 11-10-2018 TP_0290 49005afc4355b47bc72efe14d014569b 277 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 8 242 1.7E-23 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 TP_0290 49005afc4355b47bc72efe14d014569b 277 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 8 270 2.3E-59 T 11-10-2018 IPR000150 Cof family GO:0016787 TP_0290 49005afc4355b47bc72efe14d014569b 277 Gene3D G3DSA:3.40.50.1000 7 270 1.4E-69 T 11-10-2018 IPR023214 HAD superfamily TP_0651 e735953f0d034f29dfb40669f0899230 803 SUPERFAMILY SSF109604 579 769 9.42E-17 T 11-10-2018 TP_0651 e735953f0d034f29dfb40669f0899230 803 Gene3D G3DSA:1.10.3210.10 570 750 2.4E-17 T 11-10-2018 TP_0651 e735953f0d034f29dfb40669f0899230 803 Pfam PF07697 7TM-HD extracellular 49 354 3.4E-23 T 11-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain TP_0651 e735953f0d034f29dfb40669f0899230 803 TIGRFAM TIGR00277 HDIG: HDIG domain 579 676 3.3E-30 T 11-10-2018 IPR006675 HDIG domain TP_0651 e735953f0d034f29dfb40669f0899230 803 Pfam PF01966 HD domain 581 721 3.0E-20 T 11-10-2018 IPR006674 HD domain TP_0651 e735953f0d034f29dfb40669f0899230 803 Pfam PF07698 7TM receptor with intracellular HD hydrolase 367 556 1.6E-30 T 11-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain TP_0651 e735953f0d034f29dfb40669f0899230 803 SMART SM00471 577 731 4.3E-7 T 11-10-2018 IPR003607 HD/PDEase domain TP_0439 ca5b80d0504eea50f8941c3b221c63c2 170 Pfam PF01584 CheW-like domain 22 162 1.0E-32 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TP_0439 ca5b80d0504eea50f8941c3b221c63c2 170 Gene3D G3DSA:2.30.30.40 24 153 9.4E-37 T 11-10-2018 TP_0439 ca5b80d0504eea50f8941c3b221c63c2 170 SMART SM00260 18 159 2.2E-47 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TP_0439 ca5b80d0504eea50f8941c3b221c63c2 170 SUPERFAMILY SSF50341 15 163 2.09E-34 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TP_0439 ca5b80d0504eea50f8941c3b221c63c2 170 Gene3D G3DSA:2.40.50.180 41 154 9.4E-37 T 11-10-2018 TP_0156 35fd366da1334f1145a9aff568464db7 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 122 1.5E-22 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TP_0156 35fd366da1334f1145a9aff568464db7 134 PIRSF PIRSF003230 1 130 3.1E-24 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TP_0156 35fd366da1334f1145a9aff568464db7 134 Pfam PF03061 Thioesterase superfamily 17 102 1.1E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TP_0156 35fd366da1334f1145a9aff568464db7 134 SUPERFAMILY SSF54637 3 125 4.09E-37 T 11-10-2018 IPR029069 HotDog domain superfamily TP_0156 35fd366da1334f1145a9aff568464db7 134 Gene3D G3DSA:3.10.129.10 1 127 2.2E-36 T 11-10-2018 TP_0721 3072b862d29fbc29a2f754af836e6246 344 SUPERFAMILY SSF101801 250 327 2.49E-15 T 11-10-2018 IPR036429 SpoA-like superfamily TP_0721 3072b862d29fbc29a2f754af836e6246 344 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 325 1.4E-120 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TP_0721 3072b862d29fbc29a2f754af836e6246 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 3.7E-34 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TP_0721 3072b862d29fbc29a2f754af836e6246 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 3.7E-34 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TP_0721 3072b862d29fbc29a2f754af836e6246 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 3.7E-34 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TP_0721 3072b862d29fbc29a2f754af836e6246 344 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 3.7E-34 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TP_0721 3072b862d29fbc29a2f754af836e6246 344 PIRSF PIRSF002888 1 334 1.6E-115 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TP_0721 3072b862d29fbc29a2f754af836e6246 344 SUPERFAMILY SSF103039 45 230 1.65E-27 T 11-10-2018 IPR028976 CheC-like superfamily TP_0721 3072b862d29fbc29a2f754af836e6246 344 Gene3D G3DSA:2.30.330.10 243 333 4.7E-7 T 11-10-2018 IPR036429 SpoA-like superfamily TP_0721 3072b862d29fbc29a2f754af836e6246 344 Pfam PF02154 Flagellar motor switch protein FliM 39 229 5.4E-88 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TP_0721 3072b862d29fbc29a2f754af836e6246 344 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 324 1.0E-19 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) TP_0721 3072b862d29fbc29a2f754af836e6246 344 Gene3D G3DSA:3.40.1550.10 45 231 5.6E-66 T 11-10-2018 IPR028976 CheC-like superfamily TP_0049 2c56629290f46cdb6a7146e904858d8c 342 Gene3D G3DSA:2.70.70.10 176 338 2.3E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0049 2c56629290f46cdb6a7146e904858d8c 342 SUPERFAMILY SSF51261 174 334 8.37E-50 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0049 2c56629290f46cdb6a7146e904858d8c 342 Pfam PF01551 Peptidase family M23 235 330 7.8E-31 T 11-10-2018 IPR016047 Peptidase M23 TP_0480 19c567d629eaffefeffc3c76486953e4 162 TIGRFAM TIGR03546 TIGR03546: TIGR03546 family protein 4 156 1.1E-56 T 11-10-2018 IPR019935 Conserved hypothetical protein CHP03546 TP_0952 321795e0d83750587f122b6d5a76b92c 345 Gene3D G3DSA:3.40.50.1820 49 320 6.5E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TP_0952 321795e0d83750587f122b6d5a76b92c 345 SUPERFAMILY SSF53474 73 308 2.14E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TP_0952 321795e0d83750587f122b6d5a76b92c 345 Pfam PF12740 Chlorophyllase enzyme 76 200 1.2E-9 T 11-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 TP_1002 f2c9ad8d19c0489d2480c14735264caf 222 Pfam PF10016 Predicted secreted protein (DUF2259) 37 221 1.0E-23 T 11-10-2018 IPR018725 Protein of unknown function DUF2259, secreted TP_0566 4c4038212f387099af76158fc1845784 495 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 123 389 7.0E-25 T 11-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT TP_0566 4c4038212f387099af76158fc1845784 495 PIRSF PIRSF016636 1 495 3.0E-118 T 11-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB TP_0566 4c4038212f387099af76158fc1845784 495 PIRSF PIRSF500217 1 495 2.9E-115 T 11-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 Gene3D G3DSA:1.10.150.300 113 203 9.3E-139 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 Pfam PF06071 Protein of unknown function (DUF933) 284 367 1.1E-37 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 Gene3D G3DSA:3.10.20.30 48 366 9.3E-139 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 Pfam PF01926 50S ribosome-binding GTPase 5 121 4.4E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 7.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 7.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 7.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 7.5E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 368 39.978 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 SUPERFAMILY SSF81271 284 365 7.85E-33 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 Gene3D G3DSA:3.40.50.300 4 283 9.3E-139 T 11-10-2018 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 PIRSF PIRSF006641 1 368 4.1E-150 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 SUPERFAMILY SSF52540 4 305 2.94E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0124 820709f816c7ceddcf590a7567cdc2d3 368 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 368 2.2E-129 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TP_0123 b88165c4db765a716759a69f80031e20 856 SUPERFAMILY SSF48452 524 632 9.76E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0123 b88165c4db765a716759a69f80031e20 856 Gene3D G3DSA:1.25.40.10 484 687 3.5E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0215 74d608b6f83215ef03662da182038fe2 220 SUPERFAMILY SSF58014 54 145 8.37E-19 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 SUPERFAMILY SSF51064 150 205 3.92E-15 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 PRINTS PR00773 GrpE protein signature 184 203 7.5E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 PRINTS PR00773 GrpE protein signature 97 112 7.5E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 PRINTS PR00773 GrpE protein signature 69 85 7.5E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 PRINTS PR00773 GrpE protein signature 157 172 7.5E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 ProSitePatterns PS01071 grpE protein signature. 160 203 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 Gene3D G3DSA:3.90.20.20 33 147 4.3E-23 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 Hamap MF_01151 Protein GrpE [grpE]. 16 205 18.053 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 Gene3D G3DSA:2.30.22.10 149 212 1.9E-16 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TP_0215 74d608b6f83215ef03662da182038fe2 220 Pfam PF01025 GrpE 49 204 4.2E-39 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 Gene3D G3DSA:3.40.50.150 10 264 7.2E-56 T 11-10-2018 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 Gene3D G3DSA:1.10.1020.10 67 189 7.2E-56 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 13 146 6.1E-24 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 176 265 1.6E-13 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 13 29 7.5E-14 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 35 49 7.5E-14 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 206 218 7.5E-14 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 60 73 7.5E-14 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 PIRSF PIRSF000398 4 300 6.2E-86 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 TIGRFAM TIGR00571 dam: DNA adenine methylase 8 294 1.8E-101 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 209 215 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TP_0810 9335cd861ab0ebbe01f0ece82a5f7bc9 303 SUPERFAMILY SSF53335 7 295 8.32E-62 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_1023 1270b25fd2c4dc146bb8217a5c78fb77 164 Pfam PF02631 RecX family 44 158 3.6E-22 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TP_1023 1270b25fd2c4dc146bb8217a5c78fb77 164 Hamap MF_01114 Regulatory protein RecX [recX]. 2 164 12.021 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TP_1023 1270b25fd2c4dc146bb8217a5c78fb77 164 Gene3D G3DSA:1.10.10.10 68 111 5.4E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_1023 1270b25fd2c4dc146bb8217a5c78fb77 164 Gene3D G3DSA:1.10.10.10 23 66 4.4E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TP_0484 057392cb51290f20974d41c21ac420af 671 Pfam PF04773 FecR protein 103 197 1.8E-11 T 11-10-2018 IPR006860 FecR protein TP_0484 057392cb51290f20974d41c21ac420af 671 Gene3D G3DSA:2.60.40.10 334 433 3.2E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold TP_0484 057392cb51290f20974d41c21ac420af 671 Gene3D G3DSA:2.60.40.10 434 539 1.7E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold TP_0484 057392cb51290f20974d41c21ac420af 671 Gene3D G3DSA:2.60.40.10 242 333 5.3E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold TP_0689 a7b113e547a87618d639457bcd3d88a0 460 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 375 454 5.5E-23 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like TP_0689 a7b113e547a87618d639457bcd3d88a0 460 Gene3D G3DSA:3.40.50.300 17 187 4.4E-35 T 11-10-2018 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 Hamap MF_00195 GTPase Der [der]. 20 457 31.22 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 Pfam PF01926 50S ribosome-binding GTPase 22 141 1.8E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 Pfam PF01926 50S ribosome-binding GTPase 200 317 1.7E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 21 454 5.0E-136 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 SUPERFAMILY SSF52540 193 458 1.26E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0689 a7b113e547a87618d639457bcd3d88a0 460 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 198 363 3.3E-31 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 22 175 4.4E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 Gene3D G3DSA:3.40.50.300 194 371 2.6E-48 T 11-10-2018 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 Gene3D G3DSA:3.30.300.20 375 456 4.1E-22 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TP_0689 a7b113e547a87618d639457bcd3d88a0 460 PIRSF PIRSF006485 19 460 3.7E-143 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 270 288 2.9E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.9E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TP_0689 a7b113e547a87618d639457bcd3d88a0 460 SUPERFAMILY SSF52540 21 187 1.04E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0551 8b66a50be962675269935582ef8ecd20 362 Pfam PF01569 PAP2 superfamily 55 203 1.9E-17 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TP_0551 8b66a50be962675269935582ef8ecd20 362 SMART SM00014 53 199 1.1E-7 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TP_0551 8b66a50be962675269935582ef8ecd20 362 SUPERFAMILY SSF48317 4 203 1.44E-23 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TP_0551 8b66a50be962675269935582ef8ecd20 362 Gene3D G3DSA:1.20.144.10 84 221 4.8E-16 T 11-10-2018 TP_0334 fe91cc2bf050a6a2d5a6c1611d41c9fe 405 Gene3D G3DSA:1.10.260.40 1 89 1.2E-25 T 11-10-2018 TP_0334 fe91cc2bf050a6a2d5a6c1611d41c9fe 405 SMART SM00530 7 63 0.0089 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TP_0334 fe91cc2bf050a6a2d5a6c1611d41c9fe 405 SUPERFAMILY SSF47413 3 66 5.33E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TP_0334 fe91cc2bf050a6a2d5a6c1611d41c9fe 405 Pfam PF13413 Helix-turn-helix domain 8 66 4.0E-21 T 11-10-2018 TP_0738 a3e37888cafe88a129e1d91f8a66a495 111 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 17.751 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TP_0738 a3e37888cafe88a129e1d91f8a66a495 111 Gene3D G3DSA:3.30.460.10 2 107 9.9E-22 T 11-10-2018 TP_0738 a3e37888cafe88a129e1d91f8a66a495 111 Pfam PF02410 Ribosomal silencing factor during starvation 9 104 5.6E-21 T 11-10-2018 TP_0738 a3e37888cafe88a129e1d91f8a66a495 111 SUPERFAMILY SSF81301 6 108 1.5E-21 T 11-10-2018 TP_0738 a3e37888cafe88a129e1d91f8a66a495 111 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 2.7E-17 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TP_0406 10d8a74cbcdd9a73a4244bacd865e9e5 268 Gene3D G3DSA:3.40.50.1860 13 231 2.4E-61 T 11-10-2018 TP_0406 10d8a74cbcdd9a73a4244bacd865e9e5 268 Pfam PF01177 Asp/Glu/Hydantoin racemase 15 221 1.4E-18 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TP_0406 10d8a74cbcdd9a73a4244bacd865e9e5 268 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 75 83 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TP_0406 10d8a74cbcdd9a73a4244bacd865e9e5 268 TIGRFAM TIGR00067 glut_race: glutamate racemase 12 236 2.4E-47 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TP_0406 10d8a74cbcdd9a73a4244bacd865e9e5 268 Hamap MF_00258 Glutamate racemase [murI]. 8 265 28.464 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TP_0406 10d8a74cbcdd9a73a4244bacd865e9e5 268 SUPERFAMILY SSF53681 114 246 4.09E-24 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TP_0406 10d8a74cbcdd9a73a4244bacd865e9e5 268 SUPERFAMILY SSF53681 11 111 1.44E-24 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TP_0406 10d8a74cbcdd9a73a4244bacd865e9e5 268 Gene3D G3DSA:3.40.50.1860 100 213 2.4E-61 T 11-10-2018 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Gene3D G3DSA:3.10.20.310 202 289 5.1E-18 T 11-10-2018 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Pfam PF01103 Surface antigen 478 849 2.6E-62 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Pfam PF07244 Surface antigen variable number repeat 202 289 1.0E-16 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Pfam PF07244 Surface antigen variable number repeat 123 198 1.2E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Pfam PF07244 Surface antigen variable number repeat 374 446 7.5E-13 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Pfam PF07244 Surface antigen variable number repeat 292 366 2.9E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Gene3D G3DSA:3.10.20.310 120 200 3.9E-14 T 11-10-2018 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Gene3D G3DSA:3.10.20.310 290 368 1.1E-12 T 11-10-2018 TP_0326 997cf5a2698b756fe3e94d5316699512 853 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 48 832 2.3E-145 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TP_0326 997cf5a2698b756fe3e94d5316699512 853 PIRSF PIRSF006076 11 850 3.7E-169 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Gene3D G3DSA:3.10.20.310 369 448 1.9E-20 T 11-10-2018 TP_0326 997cf5a2698b756fe3e94d5316699512 853 Gene3D G3DSA:2.40.160.50 449 847 1.3E-12 T 11-10-2018 TP_0717 87d32067e1047c517a4e1d2cf81ce341 94 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 2 88 3.0E-33 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 TP_0717 87d32067e1047c517a4e1d2cf81ce341 94 Pfam PF01313 Bacterial export proteins, family 3 7 78 2.7E-26 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TP_0717 87d32067e1047c517a4e1d2cf81ce341 94 PIRSF PIRSF004669 2 90 9.8E-30 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TP_0717 87d32067e1047c517a4e1d2cf81ce341 94 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 55 77 1.5E-21 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TP_0717 87d32067e1047c517a4e1d2cf81ce341 94 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 19 40 1.5E-21 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TP_0717 87d32067e1047c517a4e1d2cf81ce341 94 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 40 55 1.5E-21 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TP_0615 a5966f44abe0ec7a7115e67a07c85bb4 147 Pfam PF01592 NifU-like N terminal domain 28 89 1.5E-13 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 TP_0615 a5966f44abe0ec7a7115e67a07c85bb4 147 SUPERFAMILY SSF82649 2 140 4.97E-35 T 11-10-2018 TP_0615 a5966f44abe0ec7a7115e67a07c85bb4 147 Gene3D G3DSA:3.90.1010.10 1 145 5.3E-37 T 11-10-2018 TP_0615 a5966f44abe0ec7a7115e67a07c85bb4 147 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 4 139 3.9E-52 T 11-10-2018 TP_0881 0ba5adc1cbdf0c009d3c5ccac615dc88 268 Pfam PF00005 ABC transporter 24 164 8.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0881 0ba5adc1cbdf0c009d3c5ccac615dc88 268 SUPERFAMILY SSF52540 17 224 5.44E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0881 0ba5adc1cbdf0c009d3c5ccac615dc88 268 SMART SM00382 32 211 4.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0881 0ba5adc1cbdf0c009d3c5ccac615dc88 268 Gene3D G3DSA:3.40.50.300 1 238 1.1E-54 T 11-10-2018 TP_1040 7efaef2b7abdbeed90e009bc63a4cb25 351 SUPERFAMILY SSF55681 7 344 2.3E-54 T 11-10-2018 TP_1040 7efaef2b7abdbeed90e009bc63a4cb25 351 Gene3D G3DSA:3.30.930.10 1 349 1.9E-69 T 11-10-2018 TP_1040 7efaef2b7abdbeed90e009bc63a4cb25 351 Pfam PF00152 tRNA synthetases class II (D, K and N) 8 344 1.0E-31 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TP_0692 0c383ade23a263393d2c49886edac12f 407 Gene3D G3DSA:3.40.50.300 41 282 5.7E-77 T 11-10-2018 TP_0692 0c383ade23a263393d2c49886edac12f 407 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 17 338 2.8E-158 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TP_0692 0c383ade23a263393d2c49886edac12f 407 Hamap MF_00268 Protein RecA [recA]. 18 344 49.522 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TP_0692 0c383ade23a263393d2c49886edac12f 407 PRINTS PR00142 RecA protein signature 107 136 3.6E-77 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TP_0692 0c383ade23a263393d2c49886edac12f 407 PRINTS PR00142 RecA protein signature 258 287 3.6E-77 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TP_0692 0c383ade23a263393d2c49886edac12f 407 PRINTS PR00142 RecA protein signature 224 252 3.6E-77 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TP_0692 0c383ade23a263393d2c49886edac12f 407 PRINTS PR00142 RecA protein signature 141 170 3.6E-77 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TP_0692 0c383ade23a263393d2c49886edac12f 407 PRINTS PR00142 RecA protein signature 179 208 3.6E-77 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TP_0692 0c383ade23a263393d2c49886edac12f 407 PRINTS PR00142 RecA protein signature 312 329 3.6E-77 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TP_0692 0c383ade23a263393d2c49886edac12f 407 Gene3D G3DSA:3.30.250.10 283 357 5.1E-22 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TP_0692 0c383ade23a263393d2c49886edac12f 407 SUPERFAMILY SSF54752 285 339 1.83E-17 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TP_0692 0c383ade23a263393d2c49886edac12f 407 Pfam PF00154 recA bacterial DNA recombination protein 20 283 1.2E-133 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TP_0692 0c383ade23a263393d2c49886edac12f 407 SUPERFAMILY SSF52540 16 282 1.7E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0692 0c383ade23a263393d2c49886edac12f 407 ProSitePatterns PS00321 recA signature. 227 235 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 TP_0692 0c383ade23a263393d2c49886edac12f 407 SMART SM00382 71 242 1.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0862 2dc003a453debc15b5d2b205ef10b7bc 264 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 56 161 3.6E-19 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 TP_0862 2dc003a453debc15b5d2b205ef10b7bc 264 Gene3D G3DSA:1.10.287.460 48 149 1.4E-14 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 TP_0862 2dc003a453debc15b5d2b205ef10b7bc 264 SUPERFAMILY SSF54534 67 256 2.04E-48 T 11-10-2018 TP_0862 2dc003a453debc15b5d2b205ef10b7bc 264 Gene3D G3DSA:3.10.50.40 150 263 3.3E-33 T 11-10-2018 TP_0862 2dc003a453debc15b5d2b205ef10b7bc 264 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 168 253 8.9E-22 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 8.0E-34 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 Pfam PF00366 Ribosomal protein S17 11 78 9.7E-31 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 Gene3D G3DSA:2.40.50.140 5 84 3.5E-33 T 11-10-2018 TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 23.96 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 77 9.0E-35 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 SUPERFAMILY SSF50249 6 83 2.83E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 8.2E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 8.2E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0198 3d25cbd7e0065df36bc1ce11596cb8a1 84 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 8.2E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_1032 d78a59367b7b33be33a0e0387fab0efd 144 Pfam PF07009 NusG domain II 34 133 1.9E-12 T 11-10-2018 IPR024045 NusG, domain 2 TP_1032 d78a59367b7b33be33a0e0387fab0efd 144 Gene3D G3DSA:2.60.320.10 52 144 6.3E-14 T 11-10-2018 IPR038690 NusG, domain 2 superfamily TP_1034 30f3f582a0ff511d3d2f18d979868039 341 Gene3D G3DSA:1.20.58.1130 22 223 2.0E-62 T 11-10-2018 TP_1034 30f3f582a0ff511d3d2f18d979868039 341 Pfam PF01699 Sodium/calcium exchanger protein 196 333 1.3E-21 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TP_1034 30f3f582a0ff511d3d2f18d979868039 341 Pfam PF01699 Sodium/calcium exchanger protein 17 162 1.0E-24 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TP_1034 30f3f582a0ff511d3d2f18d979868039 341 Gene3D G3DSA:1.20.1420.30 48 326 2.0E-62 T 11-10-2018 TP_0036 4aa38d1cc8048c9e4886f57f747da2bb 266 Pfam PF00950 ABC 3 transport family 3 257 3.1E-53 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TP_0036 4aa38d1cc8048c9e4886f57f747da2bb 266 SUPERFAMILY SSF81345 2 255 6.93E-29 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TP_0780 76890bc3630aae7cf99e1f41ba970e10 679 Gene3D G3DSA:3.60.110.10 7 286 3.4E-23 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TP_0780 76890bc3630aae7cf99e1f41ba970e10 679 TIGRFAM TIGR00552 nadE: NAD+ synthetase 365 531 1.4E-20 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 TP_0780 76890bc3630aae7cf99e1f41ba970e10 679 PIRSF PIRSF006630 10 669 2.2E-76 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TP_0780 76890bc3630aae7cf99e1f41ba970e10 679 Pfam PF02540 NAD synthase 363 532 9.3E-25 T 11-10-2018 IPR022310 NAD/GMP synthase TP_0780 76890bc3630aae7cf99e1f41ba970e10 679 SUPERFAMILY SSF56317 12 240 3.92E-14 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TP_0780 76890bc3630aae7cf99e1f41ba970e10 679 SUPERFAMILY SSF52402 354 648 8.13E-57 T 11-10-2018 TP_0780 76890bc3630aae7cf99e1f41ba970e10 679 Gene3D G3DSA:1.10.10.1140 575 678 1.4E-31 T 11-10-2018 TP_0780 76890bc3630aae7cf99e1f41ba970e10 679 Gene3D G3DSA:3.40.50.620 338 536 7.1E-47 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0015 c877ea68bf14fc89cc568921bf475278 604 SUPERFAMILY SSF55681 398 603 2.04E-34 T 11-10-2018 TP_0015 c877ea68bf14fc89cc568921bf475278 604 Pfam PF03484 tRNA synthetase B5 domain 334 392 1.4E-11 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TP_0015 c877ea68bf14fc89cc568921bf475278 604 SUPERFAMILY SSF46955 333 400 3.11E-11 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TP_0015 c877ea68bf14fc89cc568921bf475278 604 Gene3D G3DSA:3.50.40.10 127 318 7.5E-45 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 TP_0015 c877ea68bf14fc89cc568921bf475278 604 Gene3D G3DSA:3.30.56.10 330 395 9.6E-11 T 11-10-2018 TP_0015 c877ea68bf14fc89cc568921bf475278 604 Gene3D G3DSA:3.30.930.10 416 603 1.1E-37 T 11-10-2018 TP_0015 c877ea68bf14fc89cc568921bf475278 604 SMART SM00874 329 397 1.5E-12 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TP_0015 c877ea68bf14fc89cc568921bf475278 604 SMART SM00873 143 303 0.0095 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TP_0015 c877ea68bf14fc89cc568921bf475278 604 Hamap MF_00284 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 600 31.059 T 11-10-2018 IPR022918 Phenylalanine-tRNA ligase beta chain 2, bacterial/archaeal GO:0004826 KEGG: 00970+6.1.1.20 TP_0015 c877ea68bf14fc89cc568921bf475278 604 TIGRFAM TIGR00471 pheT_arch: phenylalanine--tRNA ligase, beta subunit 73 602 7.3E-124 T 11-10-2018 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TP_0489 095189918f67f322feec7bf072707832 322 SMART SM00849 61 258 3.6E-4 T 11-10-2018 IPR001279 Metallo-beta-lactamase TP_0489 095189918f67f322feec7bf072707832 322 Pfam PF12706 Beta-lactamase superfamily domain 75 281 1.8E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase TP_0489 095189918f67f322feec7bf072707832 322 SUPERFAMILY SSF56281 2 293 6.55E-38 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TP_0489 095189918f67f322feec7bf072707832 322 Gene3D G3DSA:3.60.15.10 53 319 3.8E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TP_0285 1eb66351a73ed4a39764947fabb2db11 359 SUPERFAMILY SSF102114 101 353 3.92E-13 T 11-10-2018 TP_0285 1eb66351a73ed4a39764947fabb2db11 359 Pfam PF13186 Iron-sulfur cluster-binding domain 289 351 7.2E-7 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain TP_0285 1eb66351a73ed4a39764947fabb2db11 359 TIGRFAM TIGR04321 spiroSPASM: spiro-SPASM protein 3 359 3.9E-128 T 11-10-2018 IPR027608 Spirochetes SPASM protein TP_0829 5a56e5f000dca497fd77e47aca87e8b2 294 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 19 282 7.4E-65 T 11-10-2018 IPR018708 Protein of unknown function DUF2225 TP_0127 eb6db8c9dfc41782c115af92e15da35f 229 Pfam PF10895 Domain of unknown function (DUF2715) 25 229 9.6E-40 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0127 eb6db8c9dfc41782c115af92e15da35f 229 ProDom PD332235 TP0127 TP0619 TP0618 TP0315 4 115 6.0E-61 T 11-10-2018 TP_0127 eb6db8c9dfc41782c115af92e15da35f 229 ProDom PD151141 TP0314 TP0127 TP0619 TP0617 183 228 9.0E-20 T 11-10-2018 TP_0750 9909a898f3aaa0ca61dfd0d657fe4ca8 223 SUPERFAMILY SSF53300 26 149 5.34E-16 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TP_0750 9909a898f3aaa0ca61dfd0d657fe4ca8 223 Gene3D G3DSA:3.40.50.410 24 193 4.6E-16 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TP_0750 9909a898f3aaa0ca61dfd0d657fe4ca8 223 SMART SM00327 28 206 2.6E-20 T 11-10-2018 IPR002035 von Willebrand factor, type A TP_0750 9909a898f3aaa0ca61dfd0d657fe4ca8 223 Pfam PF13519 von Willebrand factor type A domain 32 139 4.5E-13 T 11-10-2018 IPR002035 von Willebrand factor, type A TP_0185 66088b27526d25ab59d9445274c974a2 235 Pfam PF00717 Peptidase S24-like 46 94 7.9E-5 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TP_0185 66088b27526d25ab59d9445274c974a2 235 SUPERFAMILY SSF51306 39 235 5.75E-31 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TP_0185 66088b27526d25ab59d9445274c974a2 235 Gene3D G3DSA:2.10.109.10 113 235 4.2E-19 T 11-10-2018 TP_0185 66088b27526d25ab59d9445274c974a2 235 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 27 229 5.6E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TP_0185 66088b27526d25ab59d9445274c974a2 235 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 40 56 2.1E-14 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TP_0185 66088b27526d25ab59d9445274c974a2 235 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 188 207 2.1E-14 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TP_0185 66088b27526d25ab59d9445274c974a2 235 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 2.1E-14 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TP_0449 6042d214799567225840de4442b7c8f2 196 Gene3D G3DSA:1.25.40.10 21 175 6.1E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0449 6042d214799567225840de4442b7c8f2 196 SUPERFAMILY SSF48452 29 156 1.42E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_1025 0b39d5d82c213f56f1ef19cea0417b68 142 SUPERFAMILY SSF52161 2 139 3.14E-51 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TP_1025 0b39d5d82c213f56f1ef19cea0417b68 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 2.3E-61 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_1025 0b39d5d82c213f56f1ef19cea0417b68 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.474 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TP_1025 0b39d5d82c213f56f1ef19cea0417b68 142 Gene3D G3DSA:3.90.1180.10 1 142 1.4E-56 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TP_1025 0b39d5d82c213f56f1ef19cea0417b68 142 PIRSF PIRSF002181 2 141 6.2E-47 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TP_1025 0b39d5d82c213f56f1ef19cea0417b68 142 Pfam PF00572 Ribosomal protein L13 15 137 3.9E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TP_1025 0b39d5d82c213f56f1ef19cea0417b68 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 TP_0719 765ac3000ab6768deb09bf4f24f55a0e 262 Pfam PF04347 Flagellar biosynthesis protein, FliO 135 221 6.4E-8 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 60 71 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 37.872 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 PRINTS PR00060 Ribosomal protein L16 signature 43 54 1.3E-35 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 PRINTS PR00060 Ribosomal protein L16 signature 59 88 1.3E-35 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 PRINTS PR00060 Ribosomal protein L16 signature 89 118 1.3E-35 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 PRINTS PR00060 Ribosomal protein L16 signature 25 37 1.3E-35 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 3 128 9.3E-62 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 SUPERFAMILY SSF54686 3 133 3.66E-52 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 Pfam PF00252 Ribosomal protein L16p/L10e 5 132 2.9E-48 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 TP_0196 749cdfd2416b18cb3c7e0a4e4b66e05c 139 Gene3D G3DSA:3.90.1170.10 2 139 9.9E-52 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TP_0140 9c92c16c6f69b5c7966aeb11213d5d99 575 Pfam PF02386 Cation transport protein 103 567 1.0E-135 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 TP_0140 9c92c16c6f69b5c7966aeb11213d5d99 575 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 149 546 2.9E-126 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 TP_0274 c31feb080af6fd3e037987e836b7dd28 166 PIRSF PIRSF006019 4 163 7.3E-44 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TP_0274 c31feb080af6fd3e037987e836b7dd28 166 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 86 121 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TP_0274 c31feb080af6fd3e037987e836b7dd28 166 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 12 131 2.9E-27 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TP_0274 c31feb080af6fd3e037987e836b7dd28 166 Gene3D G3DSA:3.40.140.10 9 163 1.1E-41 T 11-10-2018 TP_0274 c31feb080af6fd3e037987e836b7dd28 166 SUPERFAMILY SSF53927 14 155 1.84E-32 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 19 167 1.7E-68 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 SUPERFAMILY SSF53098 18 171 6.57E-46 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 Gene3D G3DSA:3.30.420.10 17 173 1.4E-48 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 123 142 6.6E-38 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 155 167 6.6E-38 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 77 93 6.6E-38 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 99 115 6.6E-38 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 20 33 6.6E-38 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 17 170 41.034 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TP_0517 2dbfc953d1746c72aba191c05cfaf35c 196 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 19 171 9.4E-44 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TP_1038 fac21e43d51e4ffb7bb51d5a75f6d298 177 Gene3D G3DSA:1.20.1260.10 22 177 2.5E-52 T 11-10-2018 IPR012347 Ferritin-like TP_1038 fac21e43d51e4ffb7bb51d5a75f6d298 177 PIRSF PIRSF005900 15 177 5.1E-48 T 11-10-2018 IPR002177 DNA-binding protein Dps TP_1038 fac21e43d51e4ffb7bb51d5a75f6d298 177 SUPERFAMILY SSF47240 35 175 2.31E-34 T 11-10-2018 IPR009078 Ferritin-like superfamily TP_1038 fac21e43d51e4ffb7bb51d5a75f6d298 177 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 57 73 2.4E-14 T 11-10-2018 IPR002177 DNA-binding protein Dps TP_1038 fac21e43d51e4ffb7bb51d5a75f6d298 177 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 81 97 2.4E-14 T 11-10-2018 IPR002177 DNA-binding protein Dps TP_1038 fac21e43d51e4ffb7bb51d5a75f6d298 177 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 153 171 2.4E-14 T 11-10-2018 IPR002177 DNA-binding protein Dps TP_1038 fac21e43d51e4ffb7bb51d5a75f6d298 177 Pfam PF00210 Ferritin-like domain 37 176 7.5E-24 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TP_1038 fac21e43d51e4ffb7bb51d5a75f6d298 177 ProSitePatterns PS00819 Dps protein family signature 2. 83 97 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 TP_1038 fac21e43d51e4ffb7bb51d5a75f6d298 177 ProSitePatterns PS00818 Dps protein family signature 1. 57 73 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 TP_0315 c692101415e4a6e9a72f150e282f6e66 215 ProDom PD332235 TP0127 TP0619 TP0618 TP0315 36 146 2.0E-59 T 11-10-2018 TP_0315 c692101415e4a6e9a72f150e282f6e66 215 Pfam PF10895 Domain of unknown function (DUF2715) 54 169 3.7E-26 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 Pfam PF04055 Radical SAM superfamily 156 333 7.4E-29 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 452 65.411 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 Pfam PF01938 TRAM domain 388 451 4.3E-16 T 11-10-2018 IPR002792 TRAM domain TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 156 176 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 2 451 4.7E-218 T 11-10-2018 TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 Pfam PF00919 Uncharacterized protein family UPF0004 3 100 4.9E-25 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 448 6.4E-156 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 SMART SM00729 152 376 1.8E-60 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 Gene3D G3DSA:3.40.50.12160 1 135 4.9E-29 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 Gene3D G3DSA:3.80.30.20 151 390 5.2E-84 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TP_0754 fe81979dea9f688a30aaf1eb8899f97d 456 SUPERFAMILY SSF102114 139 380 2.88E-57 T 11-10-2018 TP_0348 8b7e7da7d0daa96996e9f8527334d0fa 469 Pfam PF07456 Heptaprenyl diphosphate synthase component I 20 163 6.0E-38 T 11-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I TP_0588 bee15f4e31bd115f120dcb8117351b26 254 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 2 233 8.5E-30 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 TP_0588 bee15f4e31bd115f120dcb8117351b26 254 Gene3D G3DSA:1.10.8.60 124 211 5.6E-16 T 11-10-2018 TP_0588 bee15f4e31bd115f120dcb8117351b26 254 SUPERFAMILY SSF52540 2 189 3.19E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0588 bee15f4e31bd115f120dcb8117351b26 254 Gene3D G3DSA:3.40.50.300 1 114 1.6E-8 T 11-10-2018 TP_0588 bee15f4e31bd115f120dcb8117351b26 254 Pfam PF06144 DNA polymerase III, delta subunit 5 164 4.0E-10 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 TP_1033 2a11eef17b2383635a22e46fcaa4f6f9 311 Gene3D G3DSA:3.40.1090.10 2 97 8.0E-23 T 11-10-2018 TP_1033 2a11eef17b2383635a22e46fcaa4f6f9 311 Gene3D G3DSA:3.40.1090.10 117 230 8.6E-16 T 11-10-2018 TP_1033 2a11eef17b2383635a22e46fcaa4f6f9 311 Pfam PF01734 Patatin-like phospholipase 5 198 6.9E-26 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TP_1033 2a11eef17b2383635a22e46fcaa4f6f9 311 SUPERFAMILY SSF52151 2 227 1.78E-49 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TP_0998 95847104b65a26bd85ba7e589c4e9a77 500 Pfam PF01235 Sodium:alanine symporter family 91 485 1.4E-139 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0998 95847104b65a26bd85ba7e589c4e9a77 500 PRINTS PR00175 Sodium/alanine symporter signature 218 236 6.2E-58 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0998 95847104b65a26bd85ba7e589c4e9a77 500 PRINTS PR00175 Sodium/alanine symporter signature 125 147 6.2E-58 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0998 95847104b65a26bd85ba7e589c4e9a77 500 PRINTS PR00175 Sodium/alanine symporter signature 337 355 6.2E-58 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0998 95847104b65a26bd85ba7e589c4e9a77 500 PRINTS PR00175 Sodium/alanine symporter signature 246 265 6.2E-58 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0998 95847104b65a26bd85ba7e589c4e9a77 500 PRINTS PR00175 Sodium/alanine symporter signature 442 462 6.2E-58 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0998 95847104b65a26bd85ba7e589c4e9a77 500 PRINTS PR00175 Sodium/alanine symporter signature 382 404 6.2E-58 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0998 95847104b65a26bd85ba7e589c4e9a77 500 TIGRFAM TIGR00835 agcS: amino acid carrier protein 57 473 3.5E-156 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0998 95847104b65a26bd85ba7e589c4e9a77 500 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 125 140 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0683 3de389ce151e4bdd4a728801a0ee4c84 364 SUPERFAMILY SSF48576 36 338 3.89E-59 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TP_0683 3de389ce151e4bdd4a728801a0ee4c84 364 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 239 251 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TP_0683 3de389ce151e4bdd4a728801a0ee4c84 364 Gene3D G3DSA:1.10.600.10 5 357 1.8E-66 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TP_0683 3de389ce151e4bdd4a728801a0ee4c84 364 Pfam PF00348 Polyprenyl synthetase 43 292 2.3E-49 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 TP_0683 3de389ce151e4bdd4a728801a0ee4c84 364 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 110 124 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TP_0395 4df6314170267c3f02ef7705c000e360 297 Gene3D G3DSA:1.10.443.10 113 291 6.7E-48 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TP_0395 4df6314170267c3f02ef7705c000e360 297 SUPERFAMILY SSF56349 5 288 4.41E-51 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TP_0395 4df6314170267c3f02ef7705c000e360 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 87 4.9E-25 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TP_0395 4df6314170267c3f02ef7705c000e360 297 Gene3D G3DSA:1.10.150.130 2 96 7.9E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TP_0395 4df6314170267c3f02ef7705c000e360 297 Pfam PF00589 Phage integrase family 131 282 2.3E-34 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TP_0395 4df6314170267c3f02ef7705c000e360 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 297 46.971 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD TP_0194 dae2faf6dddbb90911ae629132264086 124 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 9 112 3.6E-24 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0194 dae2faf6dddbb90911ae629132264086 124 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 5 115 21.579 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0194 dae2faf6dddbb90911ae629132264086 124 ProSitePatterns PS00464 Ribosomal protein L22 signature. 88 112 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0194 dae2faf6dddbb90911ae629132264086 124 Gene3D G3DSA:3.90.470.10 3 123 1.7E-33 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TP_0194 dae2faf6dddbb90911ae629132264086 124 SUPERFAMILY SSF54843 4 114 1.16E-30 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TP_0194 dae2faf6dddbb90911ae629132264086 124 Pfam PF00237 Ribosomal protein L22p/L17e 9 112 1.9E-26 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 Gene3D G3DSA:3.10.350.10 112 164 1.0E-14 T 11-10-2018 IPR036779 LysM domain superfamily TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 Gene3D G3DSA:3.10.350.10 58 111 1.8E-11 T 11-10-2018 IPR036779 LysM domain superfamily TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 SUPERFAMILY SSF51261 113 336 7.32E-25 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 SUPERFAMILY SSF54106 65 110 1.31E-8 T 11-10-2018 TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 Pfam PF01476 LysM domain 67 110 2.6E-10 T 11-10-2018 IPR018392 LysM domain TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 Pfam PF01476 LysM domain 113 156 1.3E-13 T 11-10-2018 IPR018392 LysM domain TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 Gene3D G3DSA:2.70.70.10 211 338 3.0E-19 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 Pfam PF01551 Peptidase family M23 242 335 6.4E-17 T 11-10-2018 IPR016047 Peptidase M23 TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 SMART SM00257 112 156 2.0E-13 T 11-10-2018 IPR018392 LysM domain TP_0444 67254ecfbbc2420a35755bd9f955e21e 342 SMART SM00257 66 110 5.9E-12 T 11-10-2018 IPR018392 LysM domain TP_0804 dac50bc39daa974374443d2d56103efe 387 Gene3D G3DSA:3.40.50.300 1 239 1.5E-71 T 11-10-2018 TP_0804 dac50bc39daa974374443d2d56103efe 387 SUPERFAMILY SSF52540 4 244 2.1E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0804 dac50bc39daa974374443d2d56103efe 387 Gene3D G3DSA:2.40.50.140 286 352 3.3E-18 T 11-10-2018 TP_0804 dac50bc39daa974374443d2d56103efe 387 Pfam PF00005 ABC transporter 21 162 2.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0804 dac50bc39daa974374443d2d56103efe 387 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0804 dac50bc39daa974374443d2d56103efe 387 SUPERFAMILY SSF50331 237 367 2.43E-23 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TP_0804 dac50bc39daa974374443d2d56103efe 387 SMART SM00382 29 212 2.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0804 dac50bc39daa974374443d2d56103efe 387 Gene3D G3DSA:2.40.50.100 261 366 3.3E-18 T 11-10-2018 TP_0083 c3a144907c365c2ad5851d696c9773b5 426 Pfam PF13200 Putative glycosyl hydrolase domain 65 320 2.0E-77 T 11-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 TP_0083 c3a144907c365c2ad5851d696c9773b5 426 SUPERFAMILY SSF51445 126 300 3.85E-8 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TP_0589 4bff642f0b9ca0a9de114d953998bb66 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site TP_0589 4bff642f0b9ca0a9de114d953998bb66 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.6E-27 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TP_0589 4bff642f0b9ca0a9de114d953998bb66 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site TP_0589 4bff642f0b9ca0a9de114d953998bb66 88 Gene3D G3DSA:3.30.1340.10 1 88 4.8E-31 T 11-10-2018 IPR035895 HPr-like superfamily TP_0589 4bff642f0b9ca0a9de114d953998bb66 88 Pfam PF00381 PTS HPr component phosphorylation site 4 82 8.4E-28 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TP_0589 4bff642f0b9ca0a9de114d953998bb66 88 SUPERFAMILY SSF55594 1 87 1.31E-27 T 11-10-2018 IPR035895 HPr-like superfamily TP_0589 4bff642f0b9ca0a9de114d953998bb66 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.6E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TP_0589 4bff642f0b9ca0a9de114d953998bb66 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.6E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TP_0589 4bff642f0b9ca0a9de114d953998bb66 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.6E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TP_1031 17ad0cd4b9e8463ec9b2a721af1bb28d 514 Pfam PF02707 Major Outer Sheath Protein N-terminal region 1 195 1.3E-102 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_1031 17ad0cd4b9e8463ec9b2a721af1bb28d 514 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 317 514 4.3E-96 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0353 2c9cc6b05756b60fa55f7c99296e59d7 169 Gene3D G3DSA:3.30.420.10 2 168 3.3E-55 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TP_0353 2c9cc6b05756b60fa55f7c99296e59d7 169 Hamap MF_00042 Ribonuclease H [rnhA]. 4 167 40.397 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 TP_0353 2c9cc6b05756b60fa55f7c99296e59d7 169 SUPERFAMILY SSF53098 7 159 5.94E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TP_0353 2c9cc6b05756b60fa55f7c99296e59d7 169 Pfam PF00075 RNase H 5 158 1.4E-51 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 TP_0308 35084e35703f25d6cfd7ab564cedde5b 321 Gene3D G3DSA:3.40.190.10 151 270 9.4E-37 T 11-10-2018 TP_0308 35084e35703f25d6cfd7ab564cedde5b 321 SUPERFAMILY SSF53850 63 313 8.89E-38 T 11-10-2018 TP_0308 35084e35703f25d6cfd7ab564cedde5b 321 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 312 1.2E-57 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TP_0308 35084e35703f25d6cfd7ab564cedde5b 321 Gene3D G3DSA:3.40.190.10 67 312 9.4E-37 T 11-10-2018 TP_0308 35084e35703f25d6cfd7ab564cedde5b 321 SMART SM00062 65 314 2.4E-58 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TP_0715 8f7fca5d853773e7e34534c880812079 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 26 361 2.7E-101 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TP_0715 8f7fca5d853773e7e34534c880812079 376 Gene3D G3DSA:3.40.1690.10 236 376 8.0E-44 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TP_0715 8f7fca5d853773e7e34534c880812079 376 SUPERFAMILY SSF160544 265 367 4.05E-30 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TP_0715 8f7fca5d853773e7e34534c880812079 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 25 371 3.7E-123 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 TP_0715 8f7fca5d853773e7e34534c880812079 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 320 341 2.5E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TP_0715 8f7fca5d853773e7e34534c880812079 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 28 50 2.5E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TP_0715 8f7fca5d853773e7e34534c880812079 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 247 264 2.5E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TP_0715 8f7fca5d853773e7e34534c880812079 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 245 2.5E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TP_0715 8f7fca5d853773e7e34534c880812079 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 290 305 2.5E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TP_0388 653a13ea28a06a93a8a3270d53e73182 271 Pfam PF08478 POTRA domain, FtsQ-type 57 123 2.6E-15 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type TP_0288 244cfb66b0d33bcfaf2427baebcc3de6 315 Pfam PF02348 Cytidylyltransferase 9 238 3.6E-57 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 TP_0288 244cfb66b0d33bcfaf2427baebcc3de6 315 SUPERFAMILY SSF53448 9 212 5.63E-23 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TP_0288 244cfb66b0d33bcfaf2427baebcc3de6 315 Gene3D G3DSA:3.90.550.10 2 212 5.1E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TP_0142 8573352e52050d0cb0789758fb848690 220 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0142 8573352e52050d0cb0789758fb848690 220 Gene3D G3DSA:3.40.50.300 3 216 3.6E-58 T 11-10-2018 TP_0142 8573352e52050d0cb0789758fb848690 220 Pfam PF00005 ABC transporter 23 162 2.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0142 8573352e52050d0cb0789758fb848690 220 SUPERFAMILY SSF52540 7 211 1.08E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0142 8573352e52050d0cb0789758fb848690 220 SMART SM00382 29 212 3.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0501 1fdf4276cc1b047bbe6de9cac893a8a3 433 Pfam PF01098 Cell cycle protein 12 197 6.9E-32 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0501 1fdf4276cc1b047bbe6de9cac893a8a3 433 Pfam PF01098 Cell cycle protein 235 431 5.4E-54 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0501 1fdf4276cc1b047bbe6de9cac893a8a3 433 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 432 2.5E-122 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0501 1fdf4276cc1b047bbe6de9cac893a8a3 433 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 390 414 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0501 1fdf4276cc1b047bbe6de9cac893a8a3 433 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 433 28.592 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0018 9683b8ed1a4d8a8d5b1dcf453a635336 657 SUPERFAMILY SSF48452 100 295 1.61E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0018 9683b8ed1a4d8a8d5b1dcf453a635336 657 Gene3D G3DSA:1.25.40.10 39 267 8.1E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0040 9e9ac6a9a3bb4922a1547bef40d6ab72 597 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 499 4.4E-21 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TP_0040 9e9ac6a9a3bb4922a1547bef40d6ab72 597 SMART SM00283 288 553 2.8E-55 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TP_0040 9e9ac6a9a3bb4922a1547bef40d6ab72 597 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 309 338 3.1E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TP_0040 9e9ac6a9a3bb4922a1547bef40d6ab72 597 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 3.1E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TP_0040 9e9ac6a9a3bb4922a1547bef40d6ab72 597 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 413 3.1E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TP_0040 9e9ac6a9a3bb4922a1547bef40d6ab72 597 Gene3D G3DSA:1.10.287.950 279 566 5.1E-37 T 11-10-2018 TP_0040 9e9ac6a9a3bb4922a1547bef40d6ab72 597 SUPERFAMILY SSF58104 285 550 1.2E-35 T 11-10-2018 TP_0205 8b78cbdbd5fa0670b8b5d807c2c718c1 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 120 4.1E-35 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0205 8b78cbdbd5fa0670b8b5d807c2c718c1 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 7 120 24.877 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0205 8b78cbdbd5fa0670b8b5d807c2c718c1 120 Gene3D G3DSA:3.30.420.100 6 120 8.1E-37 T 11-10-2018 TP_0205 8b78cbdbd5fa0670b8b5d807c2c718c1 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 7 120 2.6E-38 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0205 8b78cbdbd5fa0670b8b5d807c2c718c1 120 SUPERFAMILY SSF53137 8 118 1.44E-40 T 11-10-2018 TP_0876 cfd8c45b4634d241ff089880e345fac3 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 212 4.0E-33 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 TP_0876 cfd8c45b4634d241ff089880e345fac3 221 SUPERFAMILY SSF53067 107 194 1.07E-6 T 11-10-2018 TP_0876 cfd8c45b4634d241ff089880e345fac3 221 Gene3D G3DSA:3.30.420.40 95 184 6.6E-28 T 11-10-2018 TP_0876 cfd8c45b4634d241ff089880e345fac3 221 Gene3D G3DSA:3.30.420.40 3 203 6.6E-28 T 11-10-2018 TP_0876 cfd8c45b4634d241ff089880e345fac3 221 SUPERFAMILY SSF53067 1 101 1.29E-14 T 11-10-2018 TP_0876 cfd8c45b4634d241ff089880e345fac3 221 Pfam PF00814 Glycoprotease family 36 147 2.5E-12 T 11-10-2018 IPR000905 Gcp-like domain TP_0731 49efdac7b9323c07e1b67b7c10aaad36 236 Pfam PF00293 NUDIX domain 90 198 2.8E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TP_0731 49efdac7b9323c07e1b67b7c10aaad36 236 Gene3D G3DSA:3.90.79.10 40 213 8.7E-34 T 11-10-2018 TP_0731 49efdac7b9323c07e1b67b7c10aaad36 236 ProSitePatterns PS00893 Nudix box signature. 118 139 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TP_0731 49efdac7b9323c07e1b67b7c10aaad36 236 PRINTS PR00502 NUDIX hydrolase family signature 113 127 2.3E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TP_0731 49efdac7b9323c07e1b67b7c10aaad36 236 PRINTS PR00502 NUDIX hydrolase family signature 127 142 2.3E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TP_0731 49efdac7b9323c07e1b67b7c10aaad36 236 SUPERFAMILY SSF55811 44 215 1.35E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TP_0327 bacc074b3177a2479d5b9a67eb910faa 172 SUPERFAMILY SSF111384 23 169 1.15E-21 T 11-10-2018 TP_0327 bacc074b3177a2479d5b9a67eb910faa 172 Pfam PF03938 Outer membrane protein (OmpH-like) 10 169 2.5E-21 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TP_0327 bacc074b3177a2479d5b9a67eb910faa 172 Gene3D G3DSA:3.30.910.20 15 172 6.7E-17 T 11-10-2018 IPR024930 Skp domain superfamily TP_0327 bacc074b3177a2479d5b9a67eb910faa 172 SMART SM00935 8 170 5.3E-21 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TP_0620 af7dca4091fec32f803346d34ebe45c9 609 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 411 609 7.7E-89 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0620 af7dca4091fec32f803346d34ebe45c9 609 Pfam PF02707 Major Outer Sheath Protein N-terminal region 84 278 1.6E-97 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_0838 91d8a17130b79872ded2afc62f6cd074 554 SUPERFAMILY SSF52540 4 241 1.2E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0838 91d8a17130b79872ded2afc62f6cd074 554 Pfam PF12848 ABC transporter 227 309 2.2E-17 T 11-10-2018 IPR032781 ABC-transporter extension domain TP_0838 91d8a17130b79872ded2afc62f6cd074 554 SMART SM00382 29 234 3.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0838 91d8a17130b79872ded2afc62f6cd074 554 SMART SM00382 353 520 0.37 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0838 91d8a17130b79872ded2afc62f6cd074 554 Gene3D G3DSA:3.40.50.300 5 282 1.4E-59 T 11-10-2018 TP_0838 91d8a17130b79872ded2afc62f6cd074 554 Gene3D G3DSA:3.40.50.300 293 546 5.1E-35 T 11-10-2018 TP_0838 91d8a17130b79872ded2afc62f6cd074 554 SUPERFAMILY SSF52540 236 521 4.66E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0838 91d8a17130b79872ded2afc62f6cd074 554 Pfam PF00005 ABC transporter 345 475 3.2E-9 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0838 91d8a17130b79872ded2afc62f6cd074 554 Pfam PF00005 ABC transporter 21 187 2.6E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0664 e1c53bb3490b527c7e760f9bf5ad64b7 241 Pfam PF04620 Flagellar filament outer layer protein Flaa 17 232 1.4E-69 T 11-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 TP_0674 c7030d2796f48938794e833e7d4de340 202 Gene3D G3DSA:3.30.1370.110 82 199 4.5E-20 T 11-10-2018 TP_0674 c7030d2796f48938794e833e7d4de340 202 SMART SM00463 113 196 2.3E-27 T 11-10-2018 IPR002625 Smr domain TP_0674 c7030d2796f48938794e833e7d4de340 202 Pfam PF01713 Smr domain 116 196 6.9E-20 T 11-10-2018 IPR002625 Smr domain TP_0674 c7030d2796f48938794e833e7d4de340 202 SUPERFAMILY SSF160443 113 196 1.57E-14 T 11-10-2018 IPR036063 Smr domain superfamily TP_0797 0f539cd7c67528e427821bf96b4981e1 263 SUPERFAMILY SSF51735 1 160 4.54E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0797 0f539cd7c67528e427821bf96b4981e1 263 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 262 9.4E-79 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TP_0797 0f539cd7c67528e427821bf96b4981e1 263 SUPERFAMILY SSF48179 164 260 1.53E-29 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TP_0797 0f539cd7c67528e427821bf96b4981e1 263 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TP_0797 0f539cd7c67528e427821bf96b4981e1 263 PIRSF PIRSF000193 1 263 1.0E-82 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TP_0797 0f539cd7c67528e427821bf96b4981e1 263 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 95 1.4E-21 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal TP_0797 0f539cd7c67528e427821bf96b4981e1 263 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 165 261 1.4E-31 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TP_0797 0f539cd7c67528e427821bf96b4981e1 263 Gene3D G3DSA:1.10.3730.10 165 263 2.3E-32 T 11-10-2018 TP_0797 0f539cd7c67528e427821bf96b4981e1 263 Gene3D G3DSA:3.40.50.720 1 164 5.1E-33 T 11-10-2018 TP_0797 0f539cd7c67528e427821bf96b4981e1 263 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 263 21.227 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TP_0003 f9701d8616b03a0530476c276f565a96 403 SUPERFAMILY SSF52540 51 368 1.03E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0003 f9701d8616b03a0530476c276f565a96 403 Gene3D G3DSA:3.40.50.300 55 376 2.7E-74 T 11-10-2018 TP_0003 f9701d8616b03a0530476c276f565a96 403 Pfam PF02463 RecF/RecN/SMC N terminal domain 53 376 2.4E-10 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TP_0003 f9701d8616b03a0530476c276f565a96 403 ProSitePatterns PS00617 RecF protein signature 1. 163 183 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TP_0003 f9701d8616b03a0530476c276f565a96 403 Gene3D G3DSA:1.20.1050.90 166 344 2.7E-74 T 11-10-2018 TP_0003 f9701d8616b03a0530476c276f565a96 403 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 403 49.242 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TP_0003 f9701d8616b03a0530476c276f565a96 403 ProSitePatterns PS00618 RecF protein signature 2. 345 363 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TP_0003 f9701d8616b03a0530476c276f565a96 403 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 54 385 5.5E-62 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TP_0329 ee16ac8cf04c844a85a59c0bf3c7eeea 574 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 31 488 43.892 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TP_0329 ee16ac8cf04c844a85a59c0bf3c7eeea 574 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 280 296 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TP_0329 ee16ac8cf04c844a85a59c0bf3c7eeea 574 Gene3D G3DSA:3.90.1150.10 341 493 2.6E-43 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TP_0329 ee16ac8cf04c844a85a59c0bf3c7eeea 574 Pfam PF00464 Serine hydroxymethyltransferase 168 441 4.0E-90 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TP_0329 ee16ac8cf04c844a85a59c0bf3c7eeea 574 Pfam PF00464 Serine hydroxymethyltransferase 36 154 5.0E-26 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TP_0329 ee16ac8cf04c844a85a59c0bf3c7eeea 574 SUPERFAMILY SSF53383 19 490 3.75E-146 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TP_0959 8f14b2766c7eb50e41875b0c77f17975 129 Pfam PF10135 Rod binding protein 69 118 2.0E-9 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal TP_0559 ce8853104151912bae63eab10d8e3b24 401 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 401 118.25 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 TP_0559 ce8853104151912bae63eab10d8e3b24 401 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 178 374 1.8E-84 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 TP_0559 ce8853104151912bae63eab10d8e3b24 401 SUPERFAMILY SSF143437 8 176 2.44E-34 T 11-10-2018 TP_0559 ce8853104151912bae63eab10d8e3b24 401 SUPERFAMILY SSF52402 180 371 1.15E-41 T 11-10-2018 TP_0559 ce8853104151912bae63eab10d8e3b24 401 Gene3D G3DSA:3.30.2130.30 4 177 7.9E-42 T 11-10-2018 TP_0559 ce8853104151912bae63eab10d8e3b24 401 Gene3D G3DSA:3.40.50.620 178 390 3.0E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0559 ce8853104151912bae63eab10d8e3b24 401 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 9 371 7.1E-98 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 TP_0559 ce8853104151912bae63eab10d8e3b24 401 Pfam PF02926 THUMP domain 51 165 5.4E-24 T 11-10-2018 IPR004114 THUMP domain GO:0003723 TP_0559 ce8853104151912bae63eab10d8e3b24 401 SMART SM00981 77 168 3.3E-18 T 11-10-2018 IPR004114 THUMP domain GO:0003723 TP_0630 1858145573b0406b4505c1d14b9cf476 303 PRINTS PR00996 Glutamate methyltransferase family signature 51 64 1.7E-42 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0630 1858145573b0406b4505c1d14b9cf476 303 PRINTS PR00996 Glutamate methyltransferase family signature 130 150 1.7E-42 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0630 1858145573b0406b4505c1d14b9cf476 303 PRINTS PR00996 Glutamate methyltransferase family signature 229 243 1.7E-42 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0630 1858145573b0406b4505c1d14b9cf476 303 PRINTS PR00996 Glutamate methyltransferase family signature 163 179 1.7E-42 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0630 1858145573b0406b4505c1d14b9cf476 303 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 1.7E-42 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0630 1858145573b0406b4505c1d14b9cf476 303 PRINTS PR00996 Glutamate methyltransferase family signature 248 271 1.7E-42 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0630 1858145573b0406b4505c1d14b9cf476 303 SMART SM00138 29 291 1.9E-91 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TP_0630 1858145573b0406b4505c1d14b9cf476 303 SUPERFAMILY SSF47757 22 94 1.05E-14 T 11-10-2018 TP_0630 1858145573b0406b4505c1d14b9cf476 303 SUPERFAMILY SSF53335 95 286 2.24E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TP_0630 1858145573b0406b4505c1d14b9cf476 303 Pfam PF03705 CheR methyltransferase, all-alpha domain 30 80 3.4E-12 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TP_0630 1858145573b0406b4505c1d14b9cf476 303 PIRSF PIRSF000410 17 284 4.8E-76 T 11-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR TP_0630 1858145573b0406b4505c1d14b9cf476 303 Gene3D G3DSA:1.10.155.10 20 93 3.9E-12 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily TP_0630 1858145573b0406b4505c1d14b9cf476 303 Gene3D G3DSA:3.40.50.150 94 287 2.7E-59 T 11-10-2018 TP_0630 1858145573b0406b4505c1d14b9cf476 303 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 286 6.0E-70 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TP_0619 6a3f5d3cbf2fb5b963fe5c4ed3c7ecae 270 ProDom PD151141 TP0314 TP0127 TP0619 TP0617 223 270 2.0E-21 T 11-10-2018 TP_0619 6a3f5d3cbf2fb5b963fe5c4ed3c7ecae 270 Pfam PF10895 Domain of unknown function (DUF2715) 53 270 4.7E-43 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0619 6a3f5d3cbf2fb5b963fe5c4ed3c7ecae 270 ProDom PD332235 TP0127 TP0619 TP0618 TP0315 35 145 2.0E-59 T 11-10-2018 TP_0944 8916e5ac4b8b8a66f1b4b6dbfe98ca26 390 SUPERFAMILY SSF48452 7 112 5.58E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0944 8916e5ac4b8b8a66f1b4b6dbfe98ca26 390 Gene3D G3DSA:1.25.40.10 2 147 1.8E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0428 136c752b3a397b0a68ff0542ed7fffab 206 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 3 194 4.5E-41 T 11-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0428 136c752b3a397b0a68ff0542ed7fffab 206 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 1 197 17.154 T 11-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0428 136c752b3a397b0a68ff0542ed7fffab 206 Pfam PF01813 ATP synthase subunit D 9 192 3.4E-39 T 11-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0391 ad4b5733fe7bde7de9517fe20f9409d4 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 88 6.5E-17 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TP_0391 ad4b5733fe7bde7de9517fe20f9409d4 306 Gene3D G3DSA:1.10.443.10 110 294 6.6E-55 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TP_0391 ad4b5733fe7bde7de9517fe20f9409d4 306 Pfam PF00589 Phage integrase family 111 285 4.7E-42 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TP_0391 ad4b5733fe7bde7de9517fe20f9409d4 306 Gene3D G3DSA:1.10.150.130 5 98 3.4E-10 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TP_0391 ad4b5733fe7bde7de9517fe20f9409d4 306 SUPERFAMILY SSF56349 19 286 1.27E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TP_0305 0f6dea4747ba21d44e1ce35cbc8e2fb0 577 Hamap MF_01227 CTP synthase [pyrG]. 3 573 45.675 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TP_0305 0f6dea4747ba21d44e1ce35cbc8e2fb0 577 Pfam PF06418 CTP synthase N-terminus 5 268 5.0E-113 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TP_0305 0f6dea4747ba21d44e1ce35cbc8e2fb0 577 TIGRFAM TIGR00337 PyrG: CTP synthase 4 568 1.7E-207 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TP_0305 0f6dea4747ba21d44e1ce35cbc8e2fb0 577 Pfam PF00117 Glutamine amidotransferase class-I 343 567 7.6E-44 T 11-10-2018 IPR017926 Glutamine amidotransferase TP_0305 0f6dea4747ba21d44e1ce35cbc8e2fb0 577 Gene3D G3DSA:3.40.50.300 2 275 5.8E-115 T 11-10-2018 TP_0305 0f6dea4747ba21d44e1ce35cbc8e2fb0 577 Gene3D G3DSA:3.40.50.880 325 577 1.9E-87 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TP_0305 0f6dea4747ba21d44e1ce35cbc8e2fb0 577 SUPERFAMILY SSF52317 330 574 1.92E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TP_0305 0f6dea4747ba21d44e1ce35cbc8e2fb0 577 SUPERFAMILY SSF52540 5 268 3.64E-110 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0331 d588135b70de170b919a856e32afbfbd 488 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 170 1.6E-51 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TP_0331 d588135b70de170b919a856e32afbfbd 488 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 362 384 3.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 SUPERFAMILY SSF51735 3 174 9.86E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TP_0331 d588135b70de170b919a856e32afbfbd 488 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 Gene3D G3DSA:3.40.50.720 2 180 2.0E-54 T 11-10-2018 TP_0331 d588135b70de170b919a856e32afbfbd 488 SUPERFAMILY SSF48179 177 478 2.72E-114 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TP_0331 d588135b70de170b919a856e32afbfbd 488 SMART SM01350 179 475 1.5E-189 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 PIRSF PIRSF000109 1 483 3.6E-216 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 Gene3D G3DSA:1.10.1040.10 181 439 2.1E-97 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TP_0331 d588135b70de170b919a856e32afbfbd 488 Gene3D G3DSA:1.20.5.320 441 488 3.0E-23 T 11-10-2018 TP_0331 d588135b70de170b919a856e32afbfbd 488 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 475 2.7E-231 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0331 d588135b70de170b919a856e32afbfbd 488 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 474 2.3E-120 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 TP_0722 39038b26acfc49fa43f0ee533a9bd9cd 182 Pfam PF03748 Flagellar basal body-associated protein FliL 89 177 3.6E-8 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 TP_0298 5e53a4ed708d49ffa0832c410d2e7cd3 343 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 30 337 1.0E-89 T 11-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TP_0298 5e53a4ed708d49ffa0832c410d2e7cd3 343 Gene3D G3DSA:3.40.50.2300 33 300 1.3E-114 T 11-10-2018 TP_0298 5e53a4ed708d49ffa0832c410d2e7cd3 343 Gene3D G3DSA:3.40.50.2300 141 338 1.3E-114 T 11-10-2018 TP_0298 5e53a4ed708d49ffa0832c410d2e7cd3 343 SUPERFAMILY SSF53822 31 291 7.36E-6 T 11-10-2018 IPR028082 Periplasmic binding protein-like I TP_0253 14c1ae16ae446aa9b218b453d980560d 137 Pfam PF04519 Polymer-forming cytoskeletal 13 110 3.8E-20 T 11-10-2018 IPR007607 Bactofilin A/B TP_0459 77c8194098088dcc4595324d7e1af845 261 Pfam PF00849 RNA pseudouridylate synthase 71 216 5.2E-19 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0459 77c8194098088dcc4595324d7e1af845 261 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 125 139 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 TP_0459 77c8194098088dcc4595324d7e1af845 261 Gene3D G3DSA:3.30.70.580 71 250 3.7E-39 T 11-10-2018 TP_0459 77c8194098088dcc4595324d7e1af845 261 Gene3D G3DSA:3.30.70.1560 154 233 3.7E-39 T 11-10-2018 TP_0459 77c8194098088dcc4595324d7e1af845 261 Gene3D G3DSA:3.10.290.10 9 64 1.5E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TP_0459 77c8194098088dcc4595324d7e1af845 261 Pfam PF01479 S4 domain 11 54 3.2E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0459 77c8194098088dcc4595324d7e1af845 261 SUPERFAMILY SSF55120 70 250 1.38E-31 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0459 77c8194098088dcc4595324d7e1af845 261 SMART SM00363 10 73 6.1E-14 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0459 77c8194098088dcc4595324d7e1af845 261 SUPERFAMILY SSF55174 7 85 2.22E-15 T 11-10-2018 TP_0897 666f83c912fb65240bddd2728105295b 505 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 319 505 1.2E-78 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0897 666f83c912fb65240bddd2728105295b 505 Pfam PF02707 Major Outer Sheath Protein N-terminal region 112 284 8.7E-40 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_0563 f19c24544d1944b1d8aa5bcb3aa8f0ff 137 SUPERFAMILY SSF46565 61 122 2.75E-8 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TP_0563 f19c24544d1944b1d8aa5bcb3aa8f0ff 137 SMART SM00271 66 127 1.1E-5 T 11-10-2018 IPR001623 DnaJ domain TP_0563 f19c24544d1944b1d8aa5bcb3aa8f0ff 137 Gene3D G3DSA:1.10.287.110 66 124 5.2E-5 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TP_0197 15c99ebda6d71f32bf3869a13ea96331 72 Pfam PF00831 Ribosomal L29 protein 8 60 8.1E-10 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0197 15c99ebda6d71f32bf3869a13ea96331 72 TIGRFAM TIGR00012 L29: ribosomal protein uL29 8 60 1.1E-6 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0197 15c99ebda6d71f32bf3869a13ea96331 72 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 11.445 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0197 15c99ebda6d71f32bf3869a13ea96331 72 Gene3D G3DSA:1.10.287.310 6 67 3.8E-10 T 11-10-2018 TP_0197 15c99ebda6d71f32bf3869a13ea96331 72 SUPERFAMILY SSF46561 8 62 2.09E-11 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0882 47e8816c778cf2436808a95b70a23f70 500 Pfam PF13646 HEAT repeats 252 326 1.3E-6 T 11-10-2018 TP_0882 47e8816c778cf2436808a95b70a23f70 500 Gene3D G3DSA:1.25.10.10 132 333 2.5E-12 T 11-10-2018 IPR011989 Armadillo-like helical TP_0882 47e8816c778cf2436808a95b70a23f70 500 SUPERFAMILY SSF48371 109 404 6.33E-11 T 11-10-2018 IPR016024 Armadillo-type fold TP_0953 6ff3d9832ebfbddee5542d9a23e69682 396 Pfam PF01963 TraB family 13 229 1.1E-20 T 11-10-2018 IPR002816 Pheromone shutdown, TraB TP_0953 6ff3d9832ebfbddee5542d9a23e69682 396 TIGRFAM TIGR00261 traB: TraB family protein 17 391 2.2E-77 T 11-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal TP_1039 86428851490c2356a4b1acbdb8729642 190 Pfam PF00156 Phosphoribosyl transferase domain 61 162 1.4E-16 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TP_1039 86428851490c2356a4b1acbdb8729642 190 Gene3D G3DSA:3.40.50.2020 8 190 6.8E-55 T 11-10-2018 TP_1039 86428851490c2356a4b1acbdb8729642 190 SUPERFAMILY SSF53271 21 185 2.23E-46 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TP_1039 86428851490c2356a4b1acbdb8729642 190 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 17 184 33.995 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 TP_0900 65cbb5bd16bb5f355852c26c8de77c65 797 SUPERFAMILY SSF52540 239 409 2.12E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0900 65cbb5bd16bb5f355852c26c8de77c65 797 Pfam PF12705 PD-(D/E)XK nuclease superfamily 700 781 1.2E-7 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TP_0282 5e296f234f81cfceba453056357a67ed 239 Gene3D G3DSA:1.25.40.10 118 232 3.1E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0282 5e296f234f81cfceba453056357a67ed 239 SUPERFAMILY SSF48452 106 220 5.69E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0112 64d3c01a1725b7994654d70490b6d0a0 450 SUPERFAMILY SSF54001 6 442 7.72E-121 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TP_0112 64d3c01a1725b7994654d70490b6d0a0 450 Gene3D G3DSA:3.90.70.10 51 442 2.9E-165 T 11-10-2018 TP_0112 64d3c01a1725b7994654d70490b6d0a0 450 Pfam PF03051 Peptidase C1-like family 3 439 6.4E-198 T 11-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 TP_0112 64d3c01a1725b7994654d70490b6d0a0 450 PIRSF PIRSF005700 1 443 5.6E-179 T 11-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 TP_0112 64d3c01a1725b7994654d70490b6d0a0 450 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 62 73 - T 11-10-2018 IPR000169 Cysteine peptidase, cysteine active site TP_0112 64d3c01a1725b7994654d70490b6d0a0 450 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 360 370 - T 11-10-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 TP_0913 492b379517b7190c13b113ed3772e0a3 126 SUPERFAMILY SSF52980 6 118 2.79E-22 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TP_0913 492b379517b7190c13b113ed3772e0a3 126 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 116 21.819 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 TP_0913 492b379517b7190c13b113ed3772e0a3 126 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 104 8.5E-27 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 TP_0913 492b379517b7190c13b113ed3772e0a3 126 Gene3D G3DSA:3.40.1350.10 11 125 3.6E-30 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TP_0913 492b379517b7190c13b113ed3772e0a3 126 Pfam PF02021 Uncharacterised protein family UPF0102 12 102 1.8E-25 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 TP_0598 d809146469902f462bc7273b29a04866 605 Gene3D G3DSA:2.130.10.10 90 326 8.4E-8 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TP_0598 d809146469902f462bc7273b29a04866 605 SUPERFAMILY SSF51004 112 320 1.18E-18 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily TP_0598 d809146469902f462bc7273b29a04866 605 SUPERFAMILY SSF69304 241 502 3.92E-5 T 11-10-2018 TP_0545 da49a2f7a36b7074e4cf7d28f62f0c57 354 Gene3D G3DSA:3.40.50.2300 28 297 4.0E-79 T 11-10-2018 TP_0545 da49a2f7a36b7074e4cf7d28f62f0c57 354 SUPERFAMILY SSF53822 24 347 7.24E-62 T 11-10-2018 IPR028082 Periplasmic binding protein-like I TP_0545 da49a2f7a36b7074e4cf7d28f62f0c57 354 Pfam PF13407 Periplasmic binding protein domain 28 296 5.5E-42 T 11-10-2018 IPR025997 Periplasmic binding protein TP_0545 da49a2f7a36b7074e4cf7d28f62f0c57 354 Gene3D G3DSA:3.40.50.2300 132 280 4.0E-79 T 11-10-2018 TP_0774 381fa01d0bd37e1536194098d4f6a4a3 224 Pfam PF02308 MgtC family 11 137 4.3E-34 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TP_0774 381fa01d0bd37e1536194098d4f6a4a3 224 PRINTS PR01837 MgtC/SapB protein signature 33 51 1.3E-40 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TP_0774 381fa01d0bd37e1536194098d4f6a4a3 224 PRINTS PR01837 MgtC/SapB protein signature 64 86 1.3E-40 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TP_0774 381fa01d0bd37e1536194098d4f6a4a3 224 PRINTS PR01837 MgtC/SapB protein signature 14 33 1.3E-40 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TP_0774 381fa01d0bd37e1536194098d4f6a4a3 224 PRINTS PR01837 MgtC/SapB protein signature 91 115 1.3E-40 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TP_0291 d413babd26c1c9ebd5305526ec0f53b3 293 Gene3D G3DSA:3.20.20.70 47 292 3.7E-29 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TP_0291 d413babd26c1c9ebd5305526ec0f53b3 293 Pfam PF01070 FMN-dependent dehydrogenase 161 287 9.1E-26 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 TP_0291 d413babd26c1c9ebd5305526ec0f53b3 293 SUPERFAMILY SSF51395 51 287 2.44E-24 T 11-10-2018 TP_1020 31e74eb197b896aba97fb9fbcf9d2fe7 506 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 14 505 73.428 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TP_1020 31e74eb197b896aba97fb9fbcf9d2fe7 506 Pfam PF01425 Amidase 49 494 2.4E-150 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TP_1020 31e74eb197b896aba97fb9fbcf9d2fe7 506 SUPERFAMILY SSF75304 5 503 9.16E-139 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TP_1020 31e74eb197b896aba97fb9fbcf9d2fe7 506 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 69 503 5.1E-149 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TP_1020 31e74eb197b896aba97fb9fbcf9d2fe7 506 ProSitePatterns PS00571 Amidases signature. 170 201 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TP_1020 31e74eb197b896aba97fb9fbcf9d2fe7 506 Gene3D G3DSA:3.90.1300.10 5 506 6.9E-161 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TP_0971 d348c8058662c264ffba2c8f3cb93102 204 Pfam PF10634 Fe2+ transport protein 47 201 6.0E-54 T 11-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type TP_0971 d348c8058662c264ffba2c8f3cb93102 204 Gene3D G3DSA:2.60.40.2480 48 204 3.5E-65 T 11-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily TP_0971 d348c8058662c264ffba2c8f3cb93102 204 PIRSF PIRSF017018 19 204 4.4E-74 T 11-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type TP_0302 2e58a5cef1cb2c56c4483674a94b3a7d 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 263 3.6E-16 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TP_0695 8ef8d995e45c7b8458b636df09fc77d2 597 SUPERFAMILY SSF52440 3 63 4.03E-9 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TP_0695 8ef8d995e45c7b8458b636df09fc77d2 597 Gene3D G3DSA:3.30.1490.20 143 198 4.0E-8 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TP_0695 8ef8d995e45c7b8458b636df09fc77d2 597 SUPERFAMILY SSF56059 105 337 1.1E-21 T 11-10-2018 TP_0695 8ef8d995e45c7b8458b636df09fc77d2 597 Gene3D G3DSA:3.40.50.20 1 119 1.9E-29 T 11-10-2018 TP_0695 8ef8d995e45c7b8458b636df09fc77d2 597 Gene3D G3DSA:3.30.470.20 199 280 7.4E-12 T 11-10-2018 TP_0695 8ef8d995e45c7b8458b636df09fc77d2 597 Pfam PF13535 ATP-grasp domain 152 269 1.3E-9 T 11-10-2018 TP_0398 01c24c452ac0dfe571ec22fb6905988f 124 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 38 121 2.9E-16 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TP_0398 01c24c452ac0dfe571ec22fb6905988f 124 Pfam PF02049 Flagellar hook-basal body complex protein FliE 44 121 1.5E-14 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TP_0398 01c24c452ac0dfe571ec22fb6905988f 124 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 14 124 13.032 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TP_0398 01c24c452ac0dfe571ec22fb6905988f 124 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 110 123 3.4E-7 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TP_0398 01c24c452ac0dfe571ec22fb6905988f 124 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 54 70 3.4E-7 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TP_0398 01c24c452ac0dfe571ec22fb6905988f 124 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 105 3.4E-7 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TP_0309 1904ad5f244b956285e2dd4a28b871c0 272 Gene3D G3DSA:3.40.190.10 67 264 3.6E-35 T 11-10-2018 TP_0309 1904ad5f244b956285e2dd4a28b871c0 272 SUPERFAMILY SSF53850 67 267 2.17E-34 T 11-10-2018 TP_0309 1904ad5f244b956285e2dd4a28b871c0 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 67 264 7.5E-35 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TP_0309 1904ad5f244b956285e2dd4a28b871c0 272 Gene3D G3DSA:3.40.190.10 133 222 3.6E-35 T 11-10-2018 TP_0309 1904ad5f244b956285e2dd4a28b871c0 272 SMART SM00062 49 266 8.5E-51 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TP_0544 615e00d3c37d64d2031f769cebc081d6 622 SUPERFAMILY SSF56219 293 622 6.28E-31 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TP_0544 615e00d3c37d64d2031f769cebc081d6 622 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 304 613 1.4E-11 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TP_0544 615e00d3c37d64d2031f769cebc081d6 622 Gene3D G3DSA:3.60.10.10 301 621 2.5E-37 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TP_0225 b7d3b976fd84168681408992aa3c7a57 246 Pfam PF13306 Leucine rich repeats (6 copies) 80 206 6.4E-34 T 11-10-2018 IPR026906 Leucine rich repeat 5 TP_0225 b7d3b976fd84168681408992aa3c7a57 246 SUPERFAMILY SSF52058 80 209 4.29E-13 T 11-10-2018 TP_0225 b7d3b976fd84168681408992aa3c7a57 246 Gene3D G3DSA:3.80.10.10 32 240 5.1E-45 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily TP_0339 d23d4ae76826ca37345d7acdc7b58abb 331 SUPERFAMILY SSF55120 83 329 7.81E-62 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0339 d23d4ae76826ca37345d7acdc7b58abb 331 SMART SM00363 27 85 2.4E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0339 d23d4ae76826ca37345d7acdc7b58abb 331 Gene3D G3DSA:3.30.2350.10 82 318 5.3E-63 T 11-10-2018 TP_0339 d23d4ae76826ca37345d7acdc7b58abb 331 Pfam PF00849 RNA pseudouridylate synthase 98 268 3.2E-30 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0339 d23d4ae76826ca37345d7acdc7b58abb 331 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 28 328 2.5E-61 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TP_0405 529ea7e2ae50a091ca28e8c0e3c8354f 149 Pfam PF00805 Pentapeptide repeats (8 copies) 8 34 0.011 T 11-10-2018 IPR001646 Pentapeptide repeat TP_0405 529ea7e2ae50a091ca28e8c0e3c8354f 149 Pfam PF13599 Pentapeptide repeats (9 copies) 56 133 3.9E-16 T 11-10-2018 IPR001646 Pentapeptide repeat TP_0405 529ea7e2ae50a091ca28e8c0e3c8354f 149 SUPERFAMILY SSF141571 5 147 3.53E-26 T 11-10-2018 TP_0405 529ea7e2ae50a091ca28e8c0e3c8354f 149 Gene3D G3DSA:2.160.20.100 3 148 1.6E-22 T 11-10-2018 TP_1037 741bb9280e5e758fc01f5d14a2222942 238 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 35 237 1.1E-70 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 TP_1037 741bb9280e5e758fc01f5d14a2222942 238 Pfam PF03006 Haemolysin-III related 32 231 5.5E-34 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 TP_0029 9bcc4e2b3b0b03ff993ced4ce66a3c39 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 5.8E-58 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TP_0029 9bcc4e2b3b0b03ff993ced4ce66a3c39 425 Gene3D G3DSA:3.65.10.10 21 228 2.7E-140 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TP_0029 9bcc4e2b3b0b03ff993ced4ce66a3c39 425 SUPERFAMILY SSF55205 1 422 7.85E-105 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TP_0029 9bcc4e2b3b0b03ff993ced4ce66a3c39 425 Gene3D G3DSA:3.65.10.10 6 421 2.7E-140 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TP_0029 9bcc4e2b3b0b03ff993ced4ce66a3c39 425 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 423 7.8E-160 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0029 9bcc4e2b3b0b03ff993ced4ce66a3c39 425 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 35.413 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TP_0027 913fc90ed2db8fe264e8f1e575de2b8b 407 Gene3D G3DSA:3.90.1280.20 196 266 1.4E-26 T 11-10-2018 TP_0027 913fc90ed2db8fe264e8f1e575de2b8b 407 SUPERFAMILY SSF54631 177 311 3.05E-18 T 11-10-2018 TP_0027 913fc90ed2db8fe264e8f1e575de2b8b 407 Gene3D G3DSA:3.10.580.10 160 307 1.4E-26 T 11-10-2018 TP_0027 913fc90ed2db8fe264e8f1e575de2b8b 407 SMART SM01091 329 407 1.2E-17 T 11-10-2018 IPR005170 Transporter-associated domain TP_0027 913fc90ed2db8fe264e8f1e575de2b8b 407 SUPERFAMILY SSF56176 334 404 2.4E-15 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TP_0027 913fc90ed2db8fe264e8f1e575de2b8b 407 Gene3D G3DSA:3.30.465.10 335 405 7.1E-15 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TP_0027 913fc90ed2db8fe264e8f1e575de2b8b 407 Pfam PF03471 Transporter associated domain 334 405 5.5E-17 T 11-10-2018 IPR005170 Transporter-associated domain TP_0027 913fc90ed2db8fe264e8f1e575de2b8b 407 Pfam PF01595 Domain of unknown function DUF21 1 172 1.2E-32 T 11-10-2018 IPR002550 CNNM, transmembrane domain TP_0113 7fb5cb17cdd8204a2e025195da3ef7d3 328 Gene3D G3DSA:3.30.479.30 94 213 7.5E-14 T 11-10-2018 TP_0113 7fb5cb17cdd8204a2e025195da3ef7d3 328 TIGRFAM TIGR01933 hflK: HflK protein 33 314 2.8E-115 T 11-10-2018 IPR010201 HflK GO:0016021 TP_0113 7fb5cb17cdd8204a2e025195da3ef7d3 328 SMART SM00244 31 212 3.7E-46 T 11-10-2018 IPR001107 Band 7 domain TP_0113 7fb5cb17cdd8204a2e025195da3ef7d3 328 SUPERFAMILY SSF117892 101 214 8.5E-15 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily TP_0113 7fb5cb17cdd8204a2e025195da3ef7d3 328 Pfam PF01145 SPFH domain / Band 7 family 35 225 3.6E-28 T 11-10-2018 IPR001107 Band 7 domain TP_0979 5646d6583d44f3a343c049863de2160c 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 255 4.0E-84 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 TP_0979 5646d6583d44f3a343c049863de2160c 257 PIRSF PIRSF005902 1 257 1.0E-67 T 11-10-2018 IPR001130 TatD family GO:0016788 TP_0979 5646d6583d44f3a343c049863de2160c 257 Pfam PF01026 TatD related DNase 4 254 6.4E-64 T 11-10-2018 IPR001130 TatD family GO:0016788 TP_0979 5646d6583d44f3a343c049863de2160c 257 Gene3D G3DSA:3.20.20.140 1 255 5.1E-71 T 11-10-2018 TP_0979 5646d6583d44f3a343c049863de2160c 257 SUPERFAMILY SSF51556 1 255 6.5E-71 T 11-10-2018 IPR032466 Metal-dependent hydrolase TP_1024 37053bd04a4e9fe170c2e376fbd7228b 129 SUPERFAMILY SSF54211 6 129 4.17E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TP_1024 37053bd04a4e9fe170c2e376fbd7228b 129 Gene3D G3DSA:3.30.230.10 4 129 6.1E-45 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TP_1024 37053bd04a4e9fe170c2e376fbd7228b 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 5.5E-42 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 TP_1024 37053bd04a4e9fe170c2e376fbd7228b 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 TP_1024 37053bd04a4e9fe170c2e376fbd7228b 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 28.55 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid TP_0220 cba370aaec0e9ed657544726ef431756 108 Pfam PF01740 STAS domain 8 106 1.2E-17 T 11-10-2018 IPR002645 STAS domain TP_0220 cba370aaec0e9ed657544726ef431756 108 Gene3D G3DSA:3.30.750.24 1 107 3.6E-24 T 11-10-2018 IPR036513 STAS domain superfamily TP_0220 cba370aaec0e9ed657544726ef431756 108 SUPERFAMILY SSF52091 5 106 3.66E-22 T 11-10-2018 IPR036513 STAS domain superfamily TP_0220 cba370aaec0e9ed657544726ef431756 108 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 3 106 3.4E-17 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TP_0768 4b6e293f946e95fd2466977d9837f933 345 ProDom PD416840 MEMBRANE A ANTIGEN TREPONEMAL TMPA PRECURSOR PALMITATE SIGNAL LIPOPROTEIN PROTEIN 1 322 2.0E-170 T 11-10-2018 TP_0960 7de4102bc293a8094a4561ac56a108bf 264 SUPERFAMILY SSF117143 94 224 3.01E-34 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TP_0960 7de4102bc293a8094a4561ac56a108bf 264 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 2.9E-114 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 TP_0960 7de4102bc293a8094a4561ac56a108bf 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.4E-45 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TP_0960 7de4102bc293a8094a4561ac56a108bf 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 150 245 8.0E-31 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TP_0960 7de4102bc293a8094a4561ac56a108bf 264 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 262 1.4E-24 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TP_0960 7de4102bc293a8094a4561ac56a108bf 264 Pfam PF00460 Flagella basal body rod protein 5 35 2.2E-11 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TP_0960 7de4102bc293a8094a4561ac56a108bf 264 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TP_0730 c1e68ac85529a9b4f7c0bb7e9e98d603 365 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 226 248 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TP_0730 c1e68ac85529a9b4f7c0bb7e9e98d603 365 Gene3D G3DSA:1.20.120.1760 171 345 1.3E-9 T 11-10-2018 TP_0730 c1e68ac85529a9b4f7c0bb7e9e98d603 365 Pfam PF01066 CDP-alcohol phosphatidyltransferase 180 248 1.7E-8 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TP_0275 fe47b0303d8fda21577b5e04e8d2ec02 249 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 205 3.7E-20 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 TP_0673 c9c734509d3f143ff1342a555365af28 537 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 339 2.8E-96 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TP_0673 c9c734509d3f143ff1342a555365af28 537 SUPERFAMILY SSF52374 3 332 4.02E-103 T 11-10-2018 TP_0673 c9c734509d3f143ff1342a555365af28 537 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 523 30.847 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TP_0673 c9c734509d3f143ff1342a555365af28 537 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.6E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TP_0673 c9c734509d3f143ff1342a555365af28 537 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 222 4.6E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TP_0673 c9c734509d3f143ff1342a555365af28 537 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.6E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TP_0673 c9c734509d3f143ff1342a555365af28 537 PRINTS PR00987 Glutamyl-tRNA synthetase signature 228 236 4.6E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TP_0673 c9c734509d3f143ff1342a555365af28 537 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.6E-24 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TP_0673 c9c734509d3f143ff1342a555365af28 537 Gene3D G3DSA:1.10.10.350 423 532 5.9E-19 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TP_0673 c9c734509d3f143ff1342a555365af28 537 SUPERFAMILY SSF48163 333 523 2.75E-29 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TP_0673 c9c734509d3f143ff1342a555365af28 537 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 524 1.4E-154 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TP_0673 c9c734509d3f143ff1342a555365af28 537 Gene3D G3DSA:3.40.50.620 1 348 3.2E-136 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TP_0078 91ef126fb06f1b27b5dd52f4c1429a7e 412 PIRSF PIRSF000390 21 406 2.7E-93 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TP_0078 91ef126fb06f1b27b5dd52f4c1429a7e 412 Gene3D G3DSA:3.40.640.10 2 277 9.5E-87 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TP_0078 91ef126fb06f1b27b5dd52f4c1429a7e 412 SUPERFAMILY SSF53383 26 400 1.85E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TP_0078 91ef126fb06f1b27b5dd52f4c1429a7e 412 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 35 398 3.5E-101 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TP_0078 91ef126fb06f1b27b5dd52f4c1429a7e 412 Gene3D G3DSA:3.90.1150.10 280 405 2.0E-22 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TP_0548 de27b2381ba7b5e17bd840c92b76fb25 434 Pfam PF03687 Uncharacterised protein family (UPF0164) 35 336 8.2E-121 T 11-10-2018 IPR005362 Uncharacterised protein family UPF0164 TP_1041 e98f2124b63af8d71ae31ed7672f1a19 237 SUPERFAMILY SSF52096 59 231 5.74E-52 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TP_1041 e98f2124b63af8d71ae31ed7672f1a19 237 Gene3D G3DSA:3.90.226.10 39 233 5.0E-58 T 11-10-2018 TP_1041 e98f2124b63af8d71ae31ed7672f1a19 237 PRINTS PR00127 Clp protease catalytic subunit P signature 206 225 8.5E-28 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_1041 e98f2124b63af8d71ae31ed7672f1a19 237 PRINTS PR00127 Clp protease catalytic subunit P signature 97 117 8.5E-28 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_1041 e98f2124b63af8d71ae31ed7672f1a19 237 PRINTS PR00127 Clp protease catalytic subunit P signature 57 72 8.5E-28 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_1041 e98f2124b63af8d71ae31ed7672f1a19 237 PRINTS PR00127 Clp protease catalytic subunit P signature 149 168 8.5E-28 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_1041 e98f2124b63af8d71ae31ed7672f1a19 237 PRINTS PR00127 Clp protease catalytic subunit P signature 128 145 8.5E-28 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_1041 e98f2124b63af8d71ae31ed7672f1a19 237 Pfam PF00574 Clp protease 58 230 1.1E-63 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TP_1041 e98f2124b63af8d71ae31ed7672f1a19 237 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 34 231 33.512 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TP_0762 78a20a751f37df1864357121a3e6054e 393 Pfam PF01973 Protein of unknown function DUF115 4 120 1.2E-8 T 11-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TP_0502 33d17f799a1d00c66d8f4aa26ab137b1 298 SMART SM00248 139 172 2800.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0502 33d17f799a1d00c66d8f4aa26ab137b1 298 SMART SM00248 243 272 0.011 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0502 33d17f799a1d00c66d8f4aa26ab137b1 298 SMART SM00248 210 239 0.075 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0502 33d17f799a1d00c66d8f4aa26ab137b1 298 SMART SM00248 176 205 59.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TP_0502 33d17f799a1d00c66d8f4aa26ab137b1 298 SUPERFAMILY SSF48403 152 291 2.84E-28 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0502 33d17f799a1d00c66d8f4aa26ab137b1 298 Pfam PF12796 Ankyrin repeats (3 copies) 152 240 3.7E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain TP_0502 33d17f799a1d00c66d8f4aa26ab137b1 298 Gene3D G3DSA:1.25.40.20 124 296 9.0E-32 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TP_0643 d50d52e86af5a131ac57d81f4b2940d1 215 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 8 212 7.8E-85 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TP_0643 d50d52e86af5a131ac57d81f4b2940d1 215 SMART SM00479 14 182 4.5E-59 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TP_0643 d50d52e86af5a131ac57d81f4b2940d1 215 SUPERFAMILY SSF53098 15 202 4.62E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TP_0643 d50d52e86af5a131ac57d81f4b2940d1 215 Gene3D G3DSA:3.30.420.10 9 185 3.4E-53 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TP_0643 d50d52e86af5a131ac57d81f4b2940d1 215 Pfam PF00929 Exonuclease 17 173 8.5E-40 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TP_0499 7385c2b8ef828daef65a8befd6e583b6 168 PIRSF PIRSF037497 3 168 1.4E-31 T 11-10-2018 IPR017225 Cell shape-determining protein MreD, predicted TP_0499 7385c2b8ef828daef65a8befd6e583b6 168 Pfam PF04093 rod shape-determining protein MreD 1 156 1.9E-38 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TP_0499 7385c2b8ef828daef65a8befd6e583b6 168 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 154 5.4E-24 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TP_0047 45769122f8ca3a3fef3131eb3d3366a1 173 Gene3D G3DSA:1.20.120.490 54 172 3.3E-27 T 11-10-2018 IPR024042 TM1646-like domain superfamily TP_0047 45769122f8ca3a3fef3131eb3d3366a1 173 SUPERFAMILY SSF158397 57 172 3.01E-24 T 11-10-2018 IPR024042 TM1646-like domain superfamily TP_0047 45769122f8ca3a3fef3131eb3d3366a1 173 Pfam PF03885 Protein of unknown function (DUF327) 32 172 9.6E-25 T 11-10-2018 IPR005585 Protein of unknown function DUF327 TP_0313 5293cc47a58c4f84b2e2bc2e0c8499e8 762 Pfam PF02707 Major Outer Sheath Protein N-terminal region 96 288 8.0E-98 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_0313 5293cc47a58c4f84b2e2bc2e0c8499e8 762 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 559 762 1.9E-91 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0479 66fd4afeb925ce8384d0d0a21c76e4b4 224 ProDom PD415579 TP0346 PRECURSOR TP0697 TP0347 SIGNAL TP0698 TP0479 60 182 2.0E-65 T 11-10-2018 TP_0479 66fd4afeb925ce8384d0d0a21c76e4b4 224 Pfam PF10895 Domain of unknown function (DUF2715) 57 224 7.8E-44 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0894 9e6a03af06d51e07229e9d3aeed0c338 340 Pfam PF12872 OST-HTH/LOTUS domain 193 240 1.0E-12 T 11-10-2018 IPR025605 OST-HTH/LOTUS domain TP_0894 9e6a03af06d51e07229e9d3aeed0c338 340 Pfam PF01936 NYN domain 5 136 2.9E-20 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type TP_0894 9e6a03af06d51e07229e9d3aeed0c338 340 Gene3D G3DSA:3.40.50.1010 1 140 4.1E-5 T 11-10-2018 TP_0894 9e6a03af06d51e07229e9d3aeed0c338 340 Gene3D G3DSA:2.40.50.140 261 337 2.6E-5 T 11-10-2018 TP_0894 9e6a03af06d51e07229e9d3aeed0c338 340 Gene3D G3DSA:1.10.10.1880 180 251 2.4E-13 T 11-10-2018 TP_0641 8f17f731c9a3ec646a1f659bf8676882 442 Gene3D G3DSA:3.40.50.800 348 440 1.1E-5 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TP_0641 8f17f731c9a3ec646a1f659bf8676882 442 Pfam PF13393 Histidyl-tRNA synthetase 14 332 2.9E-50 T 11-10-2018 TP_0641 8f17f731c9a3ec646a1f659bf8676882 442 PIRSF PIRSF001549 5 441 1.2E-127 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 TP_0641 8f17f731c9a3ec646a1f659bf8676882 442 Gene3D G3DSA:3.30.930.10 4 342 8.8E-94 T 11-10-2018 TP_0641 8f17f731c9a3ec646a1f659bf8676882 442 SUPERFAMILY SSF55681 10 342 2.79E-70 T 11-10-2018 TP_0641 8f17f731c9a3ec646a1f659bf8676882 442 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 11 429 1.2E-107 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TP_0641 8f17f731c9a3ec646a1f659bf8676882 442 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 7 440 25.002 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TP_0446 2d8a6f2c9cde8499113d3c211fcd9c07 404 PIRSF PIRSF004640 24 403 1.6E-130 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TP_0446 2d8a6f2c9cde8499113d3c211fcd9c07 404 SUPERFAMILY SSF56014 308 373 9.16E-8 T 11-10-2018 TP_0446 2d8a6f2c9cde8499113d3c211fcd9c07 404 Gene3D G3DSA:3.30.413.10 302 401 2.0E-27 T 11-10-2018 TP_0446 2d8a6f2c9cde8499113d3c211fcd9c07 404 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 32 394 9.7E-135 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TP_0446 2d8a6f2c9cde8499113d3c211fcd9c07 404 Gene3D G3DSA:3.20.20.20 31 301 3.3E-77 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TP_0446 2d8a6f2c9cde8499113d3c211fcd9c07 404 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 35 399 33.488 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TP_0446 2d8a6f2c9cde8499113d3c211fcd9c07 404 Pfam PF04551 GcpE protein 44 386 2.3E-111 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TP_0043 9962638cc985f63961b989b94bfab5de 710 Pfam PF01464 Transglycosylase SLT domain 549 660 2.9E-29 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TP_0043 9962638cc985f63961b989b94bfab5de 710 Gene3D G3DSA:1.10.530.10 540 700 1.2E-39 T 11-10-2018 TP_0043 9962638cc985f63961b989b94bfab5de 710 SUPERFAMILY SSF53955 545 693 2.7E-38 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TP_0654 bec8de5d18228c5c99de4536a57fb7e8 272 Gene3D G3DSA:1.10.3720.10 15 267 6.2E-44 T 11-10-2018 IPR035906 MetI-like superfamily TP_0654 bec8de5d18228c5c99de4536a57fb7e8 272 SUPERFAMILY SSF161098 16 261 1.03E-49 T 11-10-2018 IPR035906 MetI-like superfamily TP_0654 bec8de5d18228c5c99de4536a57fb7e8 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 270 7.9E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TP_0408 66af19fc25d69fbc09827c33a0fdbfe5 1084 SUPERFAMILY SSF58113 558 699 9.55E-5 T 11-10-2018 TP_0408 66af19fc25d69fbc09827c33a0fdbfe5 1084 Gene3D G3DSA:1.20.120.20 656 816 2.6E-7 T 11-10-2018 TP_0408 66af19fc25d69fbc09827c33a0fdbfe5 1084 Gene3D G3DSA:1.20.120.20 232 386 6.2E-6 T 11-10-2018 TP_0350 c7f9c65a4246c29fa659bf7747c36385 428 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 417 2.2E-127 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TP_0350 c7f9c65a4246c29fa659bf7747c36385 428 SUPERFAMILY SSF53720 4 427 4.97E-96 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TP_0350 c7f9c65a4246c29fa659bf7747c36385 428 Gene3D G3DSA:3.40.309.10 223 385 1.4E-146 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TP_0350 c7f9c65a4246c29fa659bf7747c36385 428 Pfam PF00171 Aldehyde dehydrogenase family 17 279 2.4E-8 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TP_0350 c7f9c65a4246c29fa659bf7747c36385 428 Gene3D G3DSA:3.40.605.10 13 422 1.4E-146 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TP_0350 c7f9c65a4246c29fa659bf7747c36385 428 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 427 35.237 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TP_0350 c7f9c65a4246c29fa659bf7747c36385 428 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 334 355 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TP_0350 c7f9c65a4246c29fa659bf7747c36385 428 PIRSF PIRSF000151 1 428 1.1E-162 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 TP_0704 841f62152d839cb8ca8272aad861b66c 706 Pfam PF01368 DHH family 78 180 9.7E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TP_0704 841f62152d839cb8ca8272aad861b66c 706 SUPERFAMILY SSF64182 354 578 4.19E-42 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily TP_0704 841f62152d839cb8ca8272aad861b66c 706 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 702 3.5E-209 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 TP_0704 841f62152d839cb8ca8272aad861b66c 706 Pfam PF02272 DHHA1 domain 454 574 1.5E-12 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TP_0704 841f62152d839cb8ca8272aad861b66c 706 SUPERFAMILY SSF64182 53 208 8.11E-39 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily TP_0704 841f62152d839cb8ca8272aad861b66c 706 Gene3D G3DSA:3.10.310.30 459 578 2.5E-21 T 11-10-2018 TP_0704 841f62152d839cb8ca8272aad861b66c 706 Gene3D G3DSA:2.40.50.460 579 706 1.8E-14 T 11-10-2018 TP_0704 841f62152d839cb8ca8272aad861b66c 706 Gene3D G3DSA:3.90.1640.30 55 221 6.2E-42 T 11-10-2018 TP_0704 841f62152d839cb8ca8272aad861b66c 706 Gene3D G3DSA:3.90.1640.30 334 456 1.1E-23 T 11-10-2018 TP_0547 ad1bcf623bd97de9546abb48fe678014 376 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 10 322 1.0E-95 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TP_0547 ad1bcf623bd97de9546abb48fe678014 376 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 8 324 31.894 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TP_0547 ad1bcf623bd97de9546abb48fe678014 376 Gene3D G3DSA:3.40.1010.20 10 320 2.0E-80 T 11-10-2018 TP_0547 ad1bcf623bd97de9546abb48fe678014 376 Gene3D G3DSA:3.40.1010.20 122 235 2.0E-80 T 11-10-2018 TP_0547 ad1bcf623bd97de9546abb48fe678014 376 Gene3D G3DSA:3.40.50.11270 19 121 2.0E-80 T 11-10-2018 TP_0547 ad1bcf623bd97de9546abb48fe678014 376 Pfam PF02401 LytB protein 10 320 9.0E-79 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TP_0515 209a4398d6a8c5108c656ab8f72073a4 991 Pfam PF04453 Organic solvent tolerance protein 342 829 1.8E-81 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 TP_0899 002b067d04d90f5e9c2dd6f2213fb3d1 195 Pfam PF12705 PD-(D/E)XK nuclease superfamily 7 186 1.9E-15 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TP_0963 6df4467ff767b9f9fbc2e17c37a113f0 409 Pfam PF12704 MacB-like periplasmic core domain 20 247 2.2E-19 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TP_0963 6df4467ff767b9f9fbc2e17c37a113f0 409 Pfam PF02687 FtsX-like permease family 309 401 9.5E-14 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TP_0046 ece16e1cb03c834fd5d227cda890857c 233 Pfam PF04468 PSP1 C-terminal conserved region 86 170 6.8E-20 T 11-10-2018 IPR007557 PSP1, C-terminal TP_0260 5c24d463ff1e80923189358a882e77f8 448 Pfam PF08239 Bacterial SH3 domain 114 178 6.9E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type TP_0260 5c24d463ff1e80923189358a882e77f8 448 Gene3D G3DSA:2.30.30.40 101 179 9.3E-9 T 11-10-2018 TP_0336 efa925d9dbec1cc578df293f5729f375 566 Pfam PF03772 Competence protein 289 549 5.6E-47 T 11-10-2018 IPR004477 ComEC/Rec2-related protein TP_0336 efa925d9dbec1cc578df293f5729f375 566 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 310 483 5.7E-19 T 11-10-2018 IPR004477 ComEC/Rec2-related protein TP_0698 1b64d60e801a8a492db0b014013af23d 181 Pfam PF10895 Domain of unknown function (DUF2715) 19 181 3.6E-31 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0698 1b64d60e801a8a492db0b014013af23d 181 ProDom PD415579 TP0346 PRECURSOR TP0697 TP0347 SIGNAL TP0698 TP0479 19 143 1.0E-54 T 11-10-2018 TP_0558 c667996aebd1f8a60e7ae23044dfdb85 302 Pfam PF03824 High-affinity nickel-transport protein 73 176 2.0E-10 T 11-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 TP_0716 e3bb261e5fa8091fc2148313a3331def 265 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 258 1.3E-72 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 TP_0716 e3bb261e5fa8091fc2148313a3331def 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 205 224 1.4E-27 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TP_0716 e3bb261e5fa8091fc2148313a3331def 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 183 205 1.4E-27 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TP_0716 e3bb261e5fa8091fc2148313a3331def 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.4E-27 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TP_0716 e3bb261e5fa8091fc2148313a3331def 265 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.4E-27 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TP_0716 e3bb261e5fa8091fc2148313a3331def 265 Pfam PF01311 Bacterial export proteins, family 1 14 246 2.9E-51 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TP_0865 e2d48dbd0761b85b5d9f9194e3da8d51 479 Pfam PF03687 Uncharacterised protein family (UPF0164) 77 385 1.1E-136 T 11-10-2018 IPR005362 Uncharacterised protein family UPF0164 TP_0877 8c2fea27b831739b695a203f451678c9 365 SMART SM00471 182 323 1.2E-8 T 11-10-2018 IPR003607 HD/PDEase domain TP_0877 8c2fea27b831739b695a203f451678c9 365 SUPERFAMILY SSF109604 169 352 5.34E-32 T 11-10-2018 TP_0877 8c2fea27b831739b695a203f451678c9 365 Pfam PF01966 HD domain 189 313 1.1E-18 T 11-10-2018 IPR006674 HD domain TP_0877 8c2fea27b831739b695a203f451678c9 365 Gene3D G3DSA:1.10.3210.10 163 365 7.4E-65 T 11-10-2018 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 PRINTS PR00061 Ribosomal protein L19 signature 89 114 2.3E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 PRINTS PR00061 Ribosomal protein L19 signature 35 64 2.3E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 PRINTS PR00061 Ribosomal protein L19 signature 5 34 2.3E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 PIRSF PIRSF002191 1 123 6.5E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 Pfam PF01245 Ribosomal protein L19 5 113 4.7E-46 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 114 8.3E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 4 115 31.948 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 Gene3D G3DSA:2.30.30.790 7 119 2.7E-15 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0909 7685ad35f1967a1769ce6e0b9a56ca9e 123 SUPERFAMILY SSF50104 3 115 1.26E-43 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TP_0430 1463da45956fc3e9dcc19f0ae8affdb8 140 Gene3D G3DSA:1.20.120.610 1 140 3.8E-15 T 11-10-2018 TP_0430 1463da45956fc3e9dcc19f0ae8affdb8 140 SUPERFAMILY SSF81333 76 138 1.1E-10 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TP_0430 1463da45956fc3e9dcc19f0ae8affdb8 140 Pfam PF00137 ATP synthase subunit C 80 138 4.0E-10 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TP_0863 bcdb84cfaa05dc1ed0f7cdfa36d8d065 427 SUPERFAMILY SSF53383 3 426 1.64E-63 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TP_0863 bcdb84cfaa05dc1ed0f7cdfa36d8d065 427 Pfam PF00266 Aminotransferase class-V 4 190 2.3E-29 T 11-10-2018 IPR000192 Aminotransferase class V domain TP_0863 bcdb84cfaa05dc1ed0f7cdfa36d8d065 427 Pfam PF00266 Aminotransferase class-V 320 416 1.8E-6 T 11-10-2018 IPR000192 Aminotransferase class V domain TP_0863 bcdb84cfaa05dc1ed0f7cdfa36d8d065 427 Gene3D G3DSA:3.90.1150.10 298 427 9.2E-24 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TP_0863 bcdb84cfaa05dc1ed0f7cdfa36d8d065 427 PIRSF PIRSF005572 1 200 5.5E-48 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TP_0863 bcdb84cfaa05dc1ed0f7cdfa36d8d065 427 PIRSF PIRSF005572 219 287 1.1E-15 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TP_0863 bcdb84cfaa05dc1ed0f7cdfa36d8d065 427 PIRSF PIRSF005572 306 427 2.7E-18 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TP_0863 bcdb84cfaa05dc1ed0f7cdfa36d8d065 427 Gene3D G3DSA:3.40.640.10 3 281 8.8E-60 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TP_0840 41d5fdf692489902ce6946d32d368862 749 Gene3D G3DSA:1.20.1250.20 20 428 1.7E-16 T 11-10-2018 TP_0840 41d5fdf692489902ce6946d32d368862 749 SUPERFAMILY SSF103473 32 423 1.09E-27 T 11-10-2018 IPR036259 MFS transporter superfamily TP_0840 41d5fdf692489902ce6946d32d368862 749 SUPERFAMILY SSF48371 435 622 3.42E-12 T 11-10-2018 IPR016024 Armadillo-type fold TP_0840 41d5fdf692489902ce6946d32d368862 749 Gene3D G3DSA:1.25.10.10 451 690 4.1E-9 T 11-10-2018 IPR011989 Armadillo-like helical TP_0106 4714f1e2194964801bf8cd1ea0872af9 510 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 10 506 1.4E-126 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TP_0106 4714f1e2194964801bf8cd1ea0872af9 510 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 48 507 1.4E-167 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TP_0435 636d1308d23f486d492d92ccb5028548 156 Gene3D G3DSA:2.40.128.640 33 154 7.0E-49 T 11-10-2018 TP_0435 636d1308d23f486d492d92ccb5028548 156 Pfam PF04170 NlpE N-terminal domain 49 120 8.1E-14 T 11-10-2018 IPR007298 Copper resistance lipoprotein NlpE TP_0186 bfad82ea52f9120df87451715d4099f7 393 SMART SM00729 6 231 2.6E-38 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TP_0186 bfad82ea52f9120df87451715d4099f7 393 SUPERFAMILY SSF102114 7 385 1.57E-71 T 11-10-2018 TP_0186 bfad82ea52f9120df87451715d4099f7 393 Pfam PF06969 HemN C-terminal domain 319 376 7.7E-9 T 11-10-2018 IPR010723 HemN, C-terminal TP_0186 bfad82ea52f9120df87451715d4099f7 393 Pfam PF04055 Radical SAM superfamily 11 190 3.6E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TP_0186 bfad82ea52f9120df87451715d4099f7 393 Gene3D G3DSA:3.80.30.20 2 305 4.5E-71 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TP_0668 7320737e83f3e8ba616f72cebe375386 202 Pfam PF02325 YGGT family 11 78 8.3E-18 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 TP_0126 501852d2ab5cc013fcfc36bb2bee20e2 291 SUPERFAMILY SSF56925 164 289 4.97E-5 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TP_0126 501852d2ab5cc013fcfc36bb2bee20e2 291 ProDom PD155205 TRANSMEMBRANE MEMBRANE TP0733 TP0126 145 291 2.0E-71 T 11-10-2018 TP_0658 b78e8dfdea79d98b70da4230f83db5f4 150 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 140 24.991 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 TP_0658 b78e8dfdea79d98b70da4230f83db5f4 150 Gene3D G3DSA:2.30.290.10 1 149 5.7E-46 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily TP_0658 b78e8dfdea79d98b70da4230f83db5f4 150 SUPERFAMILY SSF141457 1 140 1.57E-42 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily TP_0658 b78e8dfdea79d98b70da4230f83db5f4 150 Pfam PF02623 FliW protein 19 137 2.2E-37 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 TP_0555 79e7f5e42e7f85af18ca64e44b632523 396 SUPERFAMILY SSF118215 10 379 9.81E-65 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TP_0555 79e7f5e42e7f85af18ca64e44b632523 396 Pfam PF00375 Sodium:dicarboxylate symporter family 9 379 5.6E-74 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 TP_0555 79e7f5e42e7f85af18ca64e44b632523 396 Gene3D G3DSA:1.10.3860.10 4 389 5.4E-47 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TP_0555 79e7f5e42e7f85af18ca64e44b632523 396 PRINTS PR00173 Glutamate-aspartate symporter signature 336 356 6.7E-9 T 11-10-2018 TP_0555 79e7f5e42e7f85af18ca64e44b632523 396 PRINTS PR00173 Glutamate-aspartate symporter signature 272 298 6.7E-9 T 11-10-2018 TP_0555 79e7f5e42e7f85af18ca64e44b632523 396 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 6.7E-9 T 11-10-2018 TP_0555 79e7f5e42e7f85af18ca64e44b632523 396 PRINTS PR00173 Glutamate-aspartate symporter signature 49 69 6.7E-9 T 11-10-2018 TP_0120 e187dfa77bbb8c5d5660ac60212114c6 269 SUPERFAMILY SSF52540 1 235 1.02E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0120 e187dfa77bbb8c5d5660ac60212114c6 269 Pfam PF00005 ABC transporter 17 165 8.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0120 e187dfa77bbb8c5d5660ac60212114c6 269 SMART SM00382 26 222 2.3E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0120 e187dfa77bbb8c5d5660ac60212114c6 269 Gene3D G3DSA:3.40.50.300 1 267 1.0E-75 T 11-10-2018 TP_0120 e187dfa77bbb8c5d5660ac60212114c6 269 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0335 72cc80f011b9e18ae0727ae63b741ecb 180 Pfam PF02517 CAAX protease self-immunity 77 172 2.7E-11 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TP_0756 1524c9894e5d63db2435dbe5425fa8a3 319 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 312 27.729 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TP_0756 1524c9894e5d63db2435dbe5425fa8a3 319 Gene3D G3DSA:3.40.50.170 1 212 4.4E-56 T 11-10-2018 TP_0756 1524c9894e5d63db2435dbe5425fa8a3 319 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 309 2.4E-70 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TP_0756 1524c9894e5d63db2435dbe5425fa8a3 319 SUPERFAMILY SSF50486 213 317 5.3E-28 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 TP_0756 1524c9894e5d63db2435dbe5425fa8a3 319 Pfam PF00551 Formyl transferase 23 176 1.5E-32 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TP_0756 1524c9894e5d63db2435dbe5425fa8a3 319 Gene3D G3DSA:3.10.25.10 213 316 1.8E-28 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TP_0756 1524c9894e5d63db2435dbe5425fa8a3 319 SUPERFAMILY SSF53328 2 210 1.83E-48 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TP_0756 1524c9894e5d63db2435dbe5425fa8a3 319 Pfam PF02911 Formyl transferase, C-terminal domain 211 309 2.6E-23 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TP_0675 17536991bfa336bc1b4b7768255da5de 332 Pfam PF01963 TraB family 63 328 1.2E-25 T 11-10-2018 IPR002816 Pheromone shutdown, TraB TP_0521 9cd6738eb0846956c4d2a82112491870 423 SUPERFAMILY SSF52540 19 310 6.54E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0521 9cd6738eb0846956c4d2a82112491870 423 Pfam PF13177 DNA polymerase III, delta subunit 11 257 7.0E-29 T 11-10-2018 TP_0734 266849febdbc67735c6624c135bbc1d3 233 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 44.43 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 TP_0734 266849febdbc67735c6624c135bbc1d3 233 Pfam PF01048 Phosphorylase superfamily 15 222 8.3E-34 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TP_0734 266849febdbc67735c6624c135bbc1d3 233 Gene3D G3DSA:3.40.50.1580 2 233 1.4E-65 T 11-10-2018 TP_0734 266849febdbc67735c6624c135bbc1d3 233 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 TP_0734 266849febdbc67735c6624c135bbc1d3 233 SUPERFAMILY SSF53167 2 232 7.99E-82 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TP_0734 266849febdbc67735c6624c135bbc1d3 233 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 2.8E-85 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 TP_0055 d4828613b562545a013e12f7281cad33 78 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 72 2.1E-5 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 TP_0055 d4828613b562545a013e12f7281cad33 78 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 77 9.6E-22 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 TP_0349 865b998e80b7e467f893ffdbaf885e55 176 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 135 2.8E-10 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TP_0349 865b998e80b7e467f893ffdbaf885e55 176 Gene3D G3DSA:3.10.50.40 3 148 1.0E-47 T 11-10-2018 TP_0349 865b998e80b7e467f893ffdbaf885e55 176 SUPERFAMILY SSF54534 2 140 5.5E-33 T 11-10-2018 TP_0349 865b998e80b7e467f893ffdbaf885e55 176 Gene3D G3DSA:2.40.10.330 71 121 1.0E-47 T 11-10-2018 TP_0923 129e64756cdc92e6fa58d2af2ae641cd 339 Pfam PF08308 PEGA domain 29 90 2.0E-6 T 11-10-2018 IPR013229 PEGA TP_0177 06b227b8d5c57fb174f1246a2928fdd7 436 Pfam PF01973 Protein of unknown function DUF115 147 261 3.0E-10 T 11-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TP_0951 504aa7c036fab43482442547336b32b4 51 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 24 9.0E-6 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0951 504aa7c036fab43482442547336b32b4 51 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.328 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0951 504aa7c036fab43482442547336b32b4 51 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 5.3E-23 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0951 504aa7c036fab43482442547336b32b4 51 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0951 504aa7c036fab43482442547336b32b4 51 Pfam PF00468 Ribosomal protein L34 2 44 7.8E-21 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TP_0175 537e89d41a6bf2068f30f7a11752c1e4 210 Pfam PF01973 Protein of unknown function DUF115 108 180 1.7E-18 T 11-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TP_0357 89a5d6cc9927aba9a2b1d3ca1865121f 246 SUPERFAMILY SSF55681 5 181 2.98E-36 T 11-10-2018 TP_0357 89a5d6cc9927aba9a2b1d3ca1865121f 246 Pfam PF02237 Biotin protein ligase C terminal domain 213 246 5.7E-6 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TP_0357 89a5d6cc9927aba9a2b1d3ca1865121f 246 Pfam PF03099 Biotin/lipoate A/B protein ligase family 28 140 1.6E-8 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TP_0357 89a5d6cc9927aba9a2b1d3ca1865121f 246 Gene3D G3DSA:3.30.930.10 8 186 9.9E-37 T 11-10-2018 TP_0964 a31cec83c5d4a3772bcb43fb22a55a47 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TP_0964 a31cec83c5d4a3772bcb43fb22a55a47 235 Pfam PF00005 ABC transporter 24 172 3.7E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TP_0964 a31cec83c5d4a3772bcb43fb22a55a47 235 SMART SM00382 33 227 5.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain TP_0964 a31cec83c5d4a3772bcb43fb22a55a47 235 SUPERFAMILY SSF52540 5 224 3.59E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0964 a31cec83c5d4a3772bcb43fb22a55a47 235 Gene3D G3DSA:3.40.50.300 2 227 2.3E-69 T 11-10-2018 TP_0859 e7ade476d7cb074df1088ca0917bf95c 232 Pfam PF03687 Uncharacterised protein family (UPF0164) 69 232 9.5E-73 T 11-10-2018 IPR005362 Uncharacterised protein family UPF0164 TP_0580 708e594804da27e9525ee2f00c797f1a 429 Pfam PF02687 FtsX-like permease family 297 418 2.7E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TP_0580 708e594804da27e9525ee2f00c797f1a 429 Pfam PF12704 MacB-like periplasmic core domain 32 215 3.3E-12 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TP_0639 2d114eb2f3c641d5b7e170cfb81a0875 654 Gene3D G3DSA:1.10.287.950 269 591 1.2E-38 T 11-10-2018 TP_0639 2d114eb2f3c641d5b7e170cfb81a0875 654 SUPERFAMILY SSF58104 392 580 7.19E-36 T 11-10-2018 TP_0639 2d114eb2f3c641d5b7e170cfb81a0875 654 SMART SM00283 364 611 1.2E-21 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TP_0639 2d114eb2f3c641d5b7e170cfb81a0875 654 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 432 560 6.0E-25 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TP_0202 6df25aef53703b94f20a11967b96542d 61 SUPERFAMILY SSF57716 5 61 1.35E-20 T 11-10-2018 TP_0202 6df25aef53703b94f20a11967b96542d 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 3.7E-25 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TP_0202 6df25aef53703b94f20a11967b96542d 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 24.806 T 11-10-2018 IPR023053 Ribosomal protein S14, type Z TP_0202 6df25aef53703b94f20a11967b96542d 61 Gene3D G3DSA:4.10.830.10 1 61 2.6E-28 T 11-10-2018 TP_0202 6df25aef53703b94f20a11967b96542d 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TP_0448 b56e3093102a75e9996bf170d5ebb9cc 360 Pfam PF14681 Uracil phosphoribosyltransferase 94 318 2.9E-20 T 11-10-2018 TP_0448 b56e3093102a75e9996bf170d5ebb9cc 360 Gene3D G3DSA:3.40.50.2020 88 322 1.5E-32 T 11-10-2018 TP_0448 b56e3093102a75e9996bf170d5ebb9cc 360 SUPERFAMILY SSF53271 73 321 3.73E-31 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TP_0434 b31d05b1e8b6512d173fd0b6d953af84 227 SUPERFAMILY SSF110997 152 224 3.14E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TP_0671 7e0014caa2e027a56f2a4fa1d3e51f1d 344 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 94 116 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TP_0671 7e0014caa2e027a56f2a4fa1d3e51f1d 344 Gene3D G3DSA:1.20.120.1760 28 205 5.7E-14 T 11-10-2018 TP_0671 7e0014caa2e027a56f2a4fa1d3e51f1d 344 Pfam PF01066 CDP-alcohol phosphatidyltransferase 47 116 1.3E-11 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TP_0617 662e88882e92d90f8d58c16d6a46cc33 92 Pfam PF10895 Domain of unknown function (DUF2715) 39 92 7.4E-14 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0617 662e88882e92d90f8d58c16d6a46cc33 92 ProDom PD151141 TP0314 TP0127 TP0619 TP0617 45 92 7.0E-22 T 11-10-2018 TP_0556 87bad927dc839c8118c3b8114dc9af6d 330 SUPERFAMILY SSF55681 5 330 1.28E-90 T 11-10-2018 TP_0556 87bad927dc839c8118c3b8114dc9af6d 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 6.4E-88 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 TP_0556 87bad927dc839c8118c3b8114dc9af6d 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 43.841 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 TP_0556 87bad927dc839c8118c3b8114dc9af6d 330 Gene3D G3DSA:3.30.930.10 1 330 1.0E-137 T 11-10-2018 TP_0556 87bad927dc839c8118c3b8114dc9af6d 330 PIRSF PIRSF001555 1 330 6.5E-152 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 TP_0556 87bad927dc839c8118c3b8114dc9af6d 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 9.5E-206 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 TP_0803 d56a5edd92b32ec65e18452ab4c6002c 402 SUPERFAMILY SSF64182 40 375 9.42E-23 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily TP_0803 d56a5edd92b32ec65e18452ab4c6002c 402 Pfam PF01368 DHH family 40 182 1.8E-7 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TP_0803 d56a5edd92b32ec65e18452ab4c6002c 402 Gene3D G3DSA:3.90.1640.10 19 235 1.3E-19 T 11-10-2018 TP_0571 edd9bc41bc2fafe4b14c1daeb985af13 221 Pfam PF04011 LemA family 36 221 4.7E-65 T 11-10-2018 IPR007156 LemA TP_0571 edd9bc41bc2fafe4b14c1daeb985af13 221 Gene3D G3DSA:1.20.1440.20 43 221 9.7E-63 T 11-10-2018 IPR023353 LemA-like domain superfamily TP_0571 edd9bc41bc2fafe4b14c1daeb985af13 221 SUPERFAMILY SSF140478 52 210 3.66E-52 T 11-10-2018 IPR023353 LemA-like domain superfamily TP_0531 b141b3e81b8ad73542dcbef46b30688d 112 Gene3D G3DSA:3.40.50.10580 11 109 3.7E-20 T 11-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0531 b141b3e81b8ad73542dcbef46b30688d 112 SUPERFAMILY SSF159468 11 112 7.19E-18 T 11-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0531 b141b3e81b8ad73542dcbef46b30688d 112 Pfam PF01990 ATP synthase (F/14-kDa) subunit 12 102 2.7E-17 T 11-10-2018 IPR008218 ATPase, V1 complex, subunit F GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0988 b7a064cea2e911fd894ae1b029bd87a4 278 Pfam PF01914 MarC family integral membrane protein 83 275 5.9E-64 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TP_0323 9528829d9702899e2fd7c202da1f5102 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 293 2.5E-50 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TP_0901 2123f27e9ecf0a90a40fbe23999253fc 470 Pfam PF01554 MatE 272 410 3.6E-8 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TP_0901 2123f27e9ecf0a90a40fbe23999253fc 470 Pfam PF01554 MatE 32 196 9.3E-34 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TP_0045 2683ac4f055b4ce5242adb20e01c5208 299 Pfam PF00962 Adenosine/AMP deaminase 145 273 3.0E-25 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 TP_0045 2683ac4f055b4ce5242adb20e01c5208 299 SUPERFAMILY SSF51556 11 285 8.17E-51 T 11-10-2018 IPR032466 Metal-dependent hydrolase TP_0045 2683ac4f055b4ce5242adb20e01c5208 299 Gene3D G3DSA:3.20.20.140 1 291 1.2E-41 T 11-10-2018 TP_0011 178076f48a1643334761ec5e76158611 660 Pfam PF02707 Major Outer Sheath Protein N-terminal region 97 319 2.4E-92 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_0011 178076f48a1643334761ec5e76158611 660 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 436 660 1.0E-94 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0319 42e0207bb0d9f71a613fd261dede4ec3 353 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 41 347 1.4E-103 T 11-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TP_0319 42e0207bb0d9f71a613fd261dede4ec3 353 Gene3D G3DSA:3.40.50.2300 143 342 1.0E-115 T 11-10-2018 TP_0319 42e0207bb0d9f71a613fd261dede4ec3 353 Gene3D G3DSA:3.40.50.2300 43 309 1.0E-115 T 11-10-2018 TP_0319 42e0207bb0d9f71a613fd261dede4ec3 353 SUPERFAMILY SSF53822 52 295 3.43E-16 T 11-10-2018 IPR028082 Periplasmic binding protein-like I TP_0553 2e4539b7ff8a42b5d81717b8190ea777 403 Pfam PF01594 AI-2E family transporter 85 371 1.2E-36 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like TP_0612 345e35f6d4cf6948152e910b307d5899 479 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 25 470 8.2E-206 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 TP_0612 345e35f6d4cf6948152e910b307d5899 479 SUPERFAMILY SSF101960 46 476 4.58E-127 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily TP_0612 345e35f6d4cf6948152e910b307d5899 479 Pfam PF01458 Uncharacterized protein family (UPF0051) 225 450 2.7E-66 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TP_0856 9a3e35cb470c55f614a43e810c3ac92a 325 Pfam PF03687 Uncharacterised protein family (UPF0164) 8 313 2.2E-86 T 11-10-2018 IPR005362 Uncharacterised protein family UPF0164 TP_0017 e7d2ac285ae26afbd04bc34737c56aad 315 SMART SM00028 122 155 6.9E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TP_0017 e7d2ac285ae26afbd04bc34737c56aad 315 SUPERFAMILY SSF48452 11 183 3.8E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0403 8c17063a30c739d50dd3092a063ec695 150 Pfam PF02050 Flagellar FliJ protein 25 141 1.4E-8 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TP_0403 8c17063a30c739d50dd3092a063ec695 150 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 3.6E-34 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TP_0014 9e5975dec42a97bdcb7dc80eb2408f9b 202 Pfam PF12683 Protein of unknown function (DUF3798) 9 103 6.4E-14 T 11-10-2018 IPR024258 Protein of unknown function DUF3798 TP_0014 9e5975dec42a97bdcb7dc80eb2408f9b 202 Gene3D G3DSA:3.40.50.11390 3 105 8.9E-13 T 11-10-2018 TP_0301 64b254bcdeafe2d7164952fc8d920721 377 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 322 1.4E-16 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TP_0686 3652051a87883b27f07c81d44e27db88 531 Pfam PF02653 Branched-chain amino acid transport system / permease component 227 520 4.5E-32 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TP_0878 af80e6f56ca167d3f1a38c9c74ece8ba 316 Pfam PF14238 Domain of unknown function (DUF4340) 90 205 1.2E-8 T 11-10-2018 IPR025641 Domain of unknown function DUF4340 TP_0007 caca4987f7742dd47d93fb8d7625dbb3 216 Pfam PF12683 Protein of unknown function (DUF3798) 3 213 2.0E-57 T 11-10-2018 IPR024258 Protein of unknown function DUF3798 TP_0007 caca4987f7742dd47d93fb8d7625dbb3 216 Gene3D G3DSA:3.40.50.11390 64 215 1.1E-32 T 11-10-2018 TP_0610 3dbfeb39e4c9963217714d44550ce4e3 693 Pfam PF02722 Major Outer Sheath Protein C-terminal domain 490 693 2.2E-93 T 11-10-2018 IPR003872 Major outer sheath protein, C-terminal TP_0610 3dbfeb39e4c9963217714d44550ce4e3 693 Pfam PF02707 Major Outer Sheath Protein N-terminal region 181 388 1.2E-98 T 11-10-2018 IPR003857 Major outer sheath protein, N-terminal TP_0314 029ddee665ac68726a641317c87206e6 48 ProDom PD151141 TP0314 TP0127 TP0619 TP0617 1 48 2.0E-21 T 11-10-2018 TP_0314 029ddee665ac68726a641317c87206e6 48 Pfam PF10895 Domain of unknown function (DUF2715) 1 48 1.7E-12 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0565 a5619e1204053bbe7a8a81679a97e153 406 Pfam PF04311 Protein of unknown function (DUF459) 55 376 3.2E-205 T 11-10-2018 IPR007407 Protein of unknown function DUF459 TP_0565 a5619e1204053bbe7a8a81679a97e153 406 SUPERFAMILY SSF52266 162 370 1.07E-15 T 11-10-2018 TP_0565 a5619e1204053bbe7a8a81679a97e153 406 Gene3D G3DSA:3.40.50.1110 144 370 1.7E-10 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TP_0033 2ae43ecd3c17464469157bce1ff33541 203 Pfam PF07099 Protein of unknown function (DUF1361) 26 187 4.3E-40 T 11-10-2018 IPR009793 Protein of unknown function DUF1361 TP_0883 65b9a0d91c41ab211901ed9748587df7 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 1 343 1.4E-44 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TP_0494 df340d351c6075f230552ad64ec502a6 273 Pfam PF02591 C4-type zinc ribbon domain 200 232 3.6E-10 T 11-10-2018 IPR003743 C4-type zinc ribbon domain TP_0845 afa319586197ef0b76be1417dfd67c32 196 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 20 166 30.637 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 TP_0845 afa319586197ef0b76be1417dfd67c32 196 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 37 162 2.7E-34 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 TP_0414 18aa561a53c15f69f6784d66637d2c2b 451 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 444 4.9E-163 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0414 18aa561a53c15f69f6784d66637d2c2b 451 Pfam PF01235 Sodium:alanine symporter family 57 449 1.0E-121 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0414 18aa561a53c15f69f6784d66637d2c2b 451 PRINTS PR00175 Sodium/alanine symporter signature 414 434 7.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0414 18aa561a53c15f69f6784d66637d2c2b 451 PRINTS PR00175 Sodium/alanine symporter signature 93 115 7.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0414 18aa561a53c15f69f6784d66637d2c2b 451 PRINTS PR00175 Sodium/alanine symporter signature 310 328 7.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0414 18aa561a53c15f69f6784d66637d2c2b 451 PRINTS PR00175 Sodium/alanine symporter signature 187 205 7.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0414 18aa561a53c15f69f6784d66637d2c2b 451 PRINTS PR00175 Sodium/alanine symporter signature 355 377 7.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0414 18aa561a53c15f69f6784d66637d2c2b 451 PRINTS PR00175 Sodium/alanine symporter signature 215 234 7.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TP_0086 88fbc2c4bf608d01911f76c19039ce16 314 Pfam PF07238 PilZ domain 158 272 1.3E-8 T 11-10-2018 IPR009875 PilZ domain GO:0035438 TP_0181 396fba9609d0cbb55984920222bff9b9 147 Pfam PF04977 Septum formation initiator 16 92 2.1E-15 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC TP_0110 e89cd5610d6db0a67517f35487b49bf6 577 Pfam PF17239 Family of unknown function (DUF5312) 13 566 4.4E-217 T 11-10-2018 IPR035196 Protein of unknown function DUF5312 TP_0322 f25dc17f6ecc5f1f04ff954d4c3ad7eb 400 Pfam PF02653 Branched-chain amino acid transport system / permease component 103 380 3.7E-34 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TP_0487 9103c22b09ccb3e0a6a9df599a73399a 525 SUPERFAMILY SSF50998 82 263 5.34E-5 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TP_0663 59144e04c2f53d1a3bdc799d34434663 242 Pfam PF04620 Flagellar filament outer layer protein Flaa 28 224 5.5E-58 T 11-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 TP_0228 15640b50ad49a2cacd037b874d601264 271 Pfam PF02632 BioY family 107 259 1.8E-31 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TP_0228 15640b50ad49a2cacd037b874d601264 271 Gene3D G3DSA:1.10.1760.20 72 268 3.2E-47 T 11-10-2018 TP_0387 3dbf6f3850ed84b3dba068935c98f97a 384 Pfam PF01098 Cell cycle protein 20 372 3.3E-96 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0387 3dbf6f3850ed84b3dba068935c98f97a 384 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 18 369 2.3E-108 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TP_0042 890d73aefc0d5db650737acd489696a4 310 Pfam PF01476 LysM domain 262 308 2.8E-12 T 11-10-2018 IPR018392 LysM domain TP_0042 890d73aefc0d5db650737acd489696a4 310 SUPERFAMILY SSF54106 260 308 1.24E-7 T 11-10-2018 TP_0042 890d73aefc0d5db650737acd489696a4 310 Gene3D G3DSA:3.10.350.10 254 310 3.2E-12 T 11-10-2018 IPR036779 LysM domain superfamily TP_0042 890d73aefc0d5db650737acd489696a4 310 SMART SM00257 261 308 3.4E-12 T 11-10-2018 IPR018392 LysM domain TP_0942 ffd8e2358c6691afdc93102ac7f35f8e 154 SUPERFAMILY SSF140566 18 129 4.32E-5 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 TP_0653 3e527de7d8cde20f9f1f87ec725b3088 299 Gene3D G3DSA:1.10.3720.10 18 283 7.0E-36 T 11-10-2018 IPR035906 MetI-like superfamily TP_0653 3e527de7d8cde20f9f1f87ec725b3088 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 270 7.3E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TP_0653 3e527de7d8cde20f9f1f87ec725b3088 299 SUPERFAMILY SSF161098 16 276 7.38E-42 T 11-10-2018 IPR035906 MetI-like superfamily TP_0530 ea46782de151be5abd59cbdf306d5c8e 208 SUPERFAMILY SSF160527 85 201 6.02E-6 T 11-10-2018 TP_0401 7141374ad2d83b8ffb77b2598751592e 309 Pfam PF02108 Flagellar assembly protein FliH 162 288 4.5E-27 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE TP_0048 4fe800daf06579382da8067ec69ed880 143 Pfam PF04519 Polymer-forming cytoskeletal 11 107 4.1E-21 T 11-10-2018 IPR007607 Bactofilin A/B TP_0226 38852044dec54cb45e803523d10b3eb1 228 Pfam PF02361 Cobalt transport protein 11 209 2.5E-5 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TP_0779 9e656006517da0af2a14572f2cfa76bc 214 Pfam PF09335 SNARE associated Golgi protein 55 155 6.2E-10 T 11-10-2018 IPR032816 SNARE associated Golgi protein TP_0004 71f737099a0da92d60998d4589fbe242 145 Pfam PF05258 Protein of unknown function (DUF721) 29 90 2.6E-12 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 TP_0151 be77e0181064b2c0b3203d1dca4235d3 339 Pfam PF03116 NQR2, RnfD, RnfE family 22 321 2.2E-18 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 TP_0245 bcdba4027508dfb0beeac665d6a03813 1151 SUPERFAMILY SSF52540 220 513 1.87E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0347 04c56f8fe079e530ef8bede2556f1b4a 276 ProDom PD415579 TP0346 PRECURSOR TP0697 TP0347 SIGNAL TP0698 TP0479 67 179 2.0E-59 T 11-10-2018 TP_0347 04c56f8fe079e530ef8bede2556f1b4a 276 Pfam PF10895 Domain of unknown function (DUF2715) 60 276 1.7E-52 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0726 13bedeab1ce406233f0f26ee149e9302 65 Pfam PF06289 Flagellar protein (FlbD) 1 58 6.6E-26 T 11-10-2018 IPR009384 Swarming motility protein SwrD-like TP_0038 49840f59e28a0998d3a94464c5006e61 350 Pfam PF13303 Phosphotransferase system, EIIC 13 343 2.0E-89 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 TP_0424 eb1e1bc70b755df1a721a9622cb3ab9f 232 SUPERFAMILY SSF160527 81 171 6.28E-5 T 11-10-2018 TP_0697 3b2f993fd644267266db4608572cd2b9 202 ProDom PD415579 TP0346 PRECURSOR TP0697 TP0347 SIGNAL TP0698 TP0479 22 144 4.0E-65 T 11-10-2018 TP_0697 3b2f993fd644267266db4608572cd2b9 202 Pfam PF10895 Domain of unknown function (DUF2715) 28 202 4.2E-43 T 11-10-2018 IPR024471 Protein of unknown function DUF2715 TP_0267 a7d4abd9c3e948fcde964d9195a55d5e 121 Pfam PF04519 Polymer-forming cytoskeletal 19 115 6.0E-22 T 11-10-2018 IPR007607 Bactofilin A/B TP_0884 85dfd42cb2d3a040b05525ce43309964 362 Pfam PF03739 Predicted permease YjgP/YjgQ family 2 357 1.2E-58 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TP_0534 d1ab3ec9098690bfb36bd69d06473522 341 SUPERFAMILY SSF103486 159 334 1.7E-9 T 11-10-2018 IPR036079 V-type ATP synthase subunit C-like Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0534 d1ab3ec9098690bfb36bd69d06473522 341 Pfam PF01992 ATP synthase (C/AC39) subunit 159 325 1.4E-12 T 11-10-2018 IPR002843 ATPase, V0 complex, c/d subunit Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TP_0522 46990db5a75916e05390d4926b659858 159 Pfam PF02674 Colicin V production protein 6 144 5.7E-26 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 TP_0782 0beb6ef30e2327c90a3c637939582019 147 SUPERFAMILY SSF51261 25 135 8.89E-5 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0782 0beb6ef30e2327c90a3c637939582019 147 Gene3D G3DSA:2.70.70.10 17 142 5.7E-7 T 11-10-2018 IPR011055 Duplicated hybrid motif TP_0101 f95c1c6cc39723227784782aa5a1d37f 264 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 10 220 2.7E-71 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 TP_0625 6ee9c8e0c8e6b78872c18f892a2df8a3 250 Gene3D G3DSA:1.25.40.10 65 246 3.1E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TP_0423 0f363305b060bd63b59526dd272ced92 268 SUPERFAMILY SSF52540 35 169 6.43E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TP_0153 eb8403be5a415833c3f320371a511988 163 Pfam PF02681 Divergent PAP2 family 16 152 1.8E-36 T 11-10-2018 IPR003832 Protein of unknown function DUF212 TP_0728 b81d693964a852f8517284493df35cac 153 Pfam PF03963 Flagellar hook capping protein - N-terminal region 34 89 1.1E-21 T 11-10-2018 IPR005648 Flagellar hook capping protein TP_0312 51b2dbd72fe21d5357ef8de9473c3796 337 Pfam PF04018 Domain of unknown function (DUF368) 14 310 7.0E-61 T 11-10-2018 IPR007163 Protein of unknown function DUF368 TP_0599 eb3db57a5c88ca24bbf8c9f3ad368c85 218 Pfam PF14353 CpXC protein 4 133 5.2E-21 T 11-10-2018 IPR025682 CpXC domain