TPCCA_0001 PF00308 Bacterial dnaA protein TPCCA_0001 PF08299 Bacterial dnaA protein helix-turn-helix TPCCA_0001 PF11638 DnaA N-terminal domain TPCCA_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain TPCCA_0002 PF02767 DNA polymerase III beta subunit, central domain TPCCA_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain TPCCA_0003 PF02463 RecF/RecN/SMC N terminal domain TPCCA_0004 PF05258 TPCCA_0004 TPCCA_0005 PF00521 DNA gyrase/topoisomerase IV, subunit A TPCCA_0005 PF03989 DNA gyrase C-terminal domain, beta-propeller TPCCA_0006 PF12683 Protein of unknown function (DUF3798) TPCCA_0009 PF02707 TPCCA_0009 TPCCA_0009 PF02722 TPCCA_0009 TPCCA_0011 PF02707 TPCCA_0011 TPCCA_0011 PF02722 TPCCA_0011 TPCCA_0013 PF12683 Protein of unknown function (DUF3798) TPCCA_0015 PF03484 tRNA synthetase B5 domain TPCCA_0016 PF05362 Lon protease (S16) C-terminal proteolytic domain TPCCA_0016 PF13654 AAA domain TPCCA_0018 PF01272 Transcription elongation factor, GreA/GreB, C-term TPCCA_0018 PF03449 Transcription elongation factor, N-terminal TPCCA_0020 PF00092 von Willebrand factor type A domain TPCCA_0023 PF00209 Sodium:neurotransmitter symporter family TPCCA_0024 PF02080 TrkA-C domain TPCCA_0024 PF02254 TrkA-N domain TPCCA_0025 PF00675 Insulinase (Peptidase family M16) TPCCA_0025 PF05193 Peptidase M16 inactive domain TPCCA_0025 PF08367 Peptidase M16C associated TPCCA_0026 PF01706 FliG C-terminal domain TPCCA_0026 PF14841 FliG middle domain TPCCA_0026 PF14842 FliG N-terminal domain TPCCA_0027 PF01595 TPCCA_0027 TPCCA_0027 PF03471 Transporter associated domain TPCCA_0028 PF01595 TPCCA_0028 TPCCA_0028 PF03471 Transporter associated domain TPCCA_0029 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TPCCA_0030 PF00118 TCP-1/cpn60 chaperonin family TPCCA_0032 PF04452 RNA methyltransferase TPCCA_0033 PF07099 TPCCA_0033 TPCCA_0034 PF01297 Periplasmic solute binding protein family TPCCA_0035 PF00005 ABC transporter TPCCA_0036 PF00950 TPCCA_0036 TPCCA_0037 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TPCCA_0037 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TPCCA_0038 PF13303 TPCCA_0038 TPCCA_0040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPCCA_0042 PF01476 LysM domain TPCCA_0043 PF01464 Transglycosylase SLT domain TPCCA_0044 PF01134 Glucose inhibited division protein A TPCCA_0044 PF13932 GidA associated domain 3 TPCCA_0045 PF00962 Adenosine/AMP deaminase TPCCA_0046 PF04468 TPCCA_0046 TPCCA_0047 PF03885 Protein of unknown function (DUF327) TPCCA_0048 PF04519 TPCCA_0048 TPCCA_0049 PF01551 Peptidase family M23 TPCCA_0050 PF00156 Phosphoribosyl transferase domain TPCCA_0051 PF00472 RF-1 domain TPCCA_0051 PF03462 PCRF domain TPCCA_0053 PF00268 Ribonucleotide reductase, small chain TPCCA_0054 PF00588 SpoU rRNA Methylase family TPCCA_0054 PF08032 RNA 2'-O ribose methyltransferase substrate binding TPCCA_0055 PF04277 TPCCA_0055 TPCCA_0056 PF00364 Biotin-requiring enzyme TPCCA_0056 PF00682 HMGL-like TPCCA_0056 PF02436 Conserved carboxylase domain TPCCA_0057 PF03977 TPCCA_0057 TPCCA_0058 PF00772 DnaB-like helicase N terminal domain TPCCA_0058 PF03796 DnaB-like helicase C terminal domain TPCCA_0060 PF01281 Ribosomal protein L9, N-terminal domain TPCCA_0060 PF03948 Ribosomal protein L9, C-terminal domain TPCCA_0061 PF01084 Ribosomal protein S18 TPCCA_0062 PF00436 Single-strand binding protein family TPCCA_0063 PF01250 Ribosomal protein S6 TPCCA_0065 PF03602 Conserved hypothetical protein 95 TPCCA_0067 PF13176 Tetratricopeptide repeat TPCCA_0067 PF13181 Tetratricopeptide repeat TPCCA_0067 PF13432 Tetratricopeptide repeat TPCCA_0067 PF14559 Tetratricopeptide repeat TPCCA_0068 PF04055 Radical SAM superfamily TPCCA_0071 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_0071 PF02861 Clp amino terminal domain TPCCA_0071 PF07724 AAA domain (Cdc48 subfamily) TPCCA_0071 PF10431 C-terminal, D2-small domain, of ClpB protein TPCCA_0072 PF00462 Glutaredoxin TPCCA_0073 PF08668 HDOD domain TPCCA_0074 PF01547 Bacterial extracellular solute-binding protein TPCCA_0075 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_0076 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_0077 PF02719 Polysaccharide biosynthesis protein TPCCA_0078 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TPCCA_0079 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TPCCA_0079 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TPCCA_0080 PF01799 [2Fe-2S] binding domain TPCCA_0081 PF00941 FAD binding domain in molybdopterin dehydrogenase TPCCA_0082 PF00158 Sigma-54 interaction domain TPCCA_0082 PF02954 Bacterial regulatory protein, Fis family TPCCA_0082 PF13492 GAF domain TPCCA_0083 PF13200 TPCCA_0083 TPCCA_0085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TPCCA_0086 PF07238 PilZ domain TPCCA_0087 PF02643 Uncharacterized ACR, COG1430 TPCCA_0089 PF00027 Cyclic nucleotide-binding domain TPCCA_0090 PF01565 FAD binding domain TPCCA_0090 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TPCCA_0091 PF01406 tRNA synthetases class I (C) catalytic domain TPCCA_0092 PF04542 Sigma-70 region 2 TPCCA_0092 PF08281 Sigma-70, region 4 TPCCA_0094 PF01515 Phosphate acetyl/butaryl transferase TPCCA_0095 PF13174 Tetratricopeptide repeat TPCCA_0095 PF13176 Tetratricopeptide repeat TPCCA_0096 PF01258 Prokaryotic dksA/traR C4-type zinc finger TPCCA_0097 PF01176 Translation initiation factor 1A / IF-1 TPCCA_0098 PF00226 DnaJ domain TPCCA_0099 PF00696 Amino acid kinase family TPCCA_0100 PF08534 Redoxin TPCCA_0101 PF02683 TPCCA_0101 TPCCA_0102 PF00580 UvrD/REP helicase N-terminal domain TPCCA_0102 PF13361 UvrD-like helicase C-terminal domain TPCCA_0104 PF00149 Calcineurin-like phosphoesterase TPCCA_0104 PF02872 5'-nucleotidase, C-terminal domain TPCCA_0105 PF00476 DNA polymerase family A TPCCA_0105 PF01367 5'-3' exonuclease, C-terminal SAM fold TPCCA_0105 PF01612 3'-5' exonuclease TPCCA_0105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TPCCA_0106 PF02028 BCCT family transporter TPCCA_0107 PF01636 Phosphotransferase enzyme family TPCCA_0107 PF12804 MobA-like NTP transferase domain TPCCA_0108 PF00365 Phosphofructokinase TPCCA_0109 PF00588 SpoU rRNA Methylase family TPCCA_0110 PF17239 TPCCA_0110 TPCCA_0111 PF00309 TPCCA_0111 TPCCA_0111 PF04552 Sigma-54, DNA binding domain TPCCA_0111 PF04963 Sigma-54 factor, core binding domain TPCCA_0112 PF03051 Peptidase C1-like family TPCCA_0113 PF01145 SPFH domain / Band 7 family TPCCA_0114 PF01145 SPFH domain / Band 7 family TPCCA_0115 PF08543 Phosphomethylpyrimidine kinase TPCCA_0116 PF00271 Helicase conserved C-terminal domain TPCCA_0116 PF02151 UvrB/uvrC motif TPCCA_0116 PF04851 Type III restriction enzyme, res subunit TPCCA_0116 PF12344 Ultra-violet resistance protein B TPCCA_0119 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_0120 PF00005 ABC transporter TPCCA_0121 PF13353 4Fe-4S single cluster domain TPCCA_0122 PF00821 Phosphoenolpyruvate carboxykinase TPCCA_0122 PF17297 TPCCA_0122 TPCCA_0124 PF01926 50S ribosome-binding GTPase TPCCA_0124 PF06071 Protein of unknown function (DUF933) TPCCA_0125 PF03372 Endonuclease/Exonuclease/phosphatase family TPCCA_0126a PF02722 TPCCA_0126a TPCCA_0126b PF02722 TPCCA_0126b TPCCA_0139 PF02254 TrkA-N domain TPCCA_0140 PF02386 Cation transport protein TPCCA_0141 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TPCCA_0142 PF00005 ABC transporter TPCCA_0143 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_0144 PF13343 Bacterial extracellular solute-binding protein TPCCA_0145 PF00501 AMP-binding enzyme TPCCA_0147 PF03065 Glycosyl hydrolase family 57 TPCCA_0147 PF09095 Domain of unknown function (DUF1926) TPCCA_0151 PF03116 TPCCA_0151 TPCCA_0152 PF10531 SLBB domain TPCCA_0152 PF13375 RnfC Barrel sandwich hybrid domain TPCCA_0153 PF02681 TPCCA_0153 TPCCA_0154 PF00849 RNA pseudouridylate synthase TPCCA_0154 PF01479 S4 domain TPCCA_0155 PF01476 LysM domain TPCCA_0155 PF01551 Peptidase family M23 TPCCA_0156 PF03061 Thioesterase superfamily TPCCA_0157 PF01553 Acyltransferase TPCCA_0158 PF00702 haloacid dehalogenase-like hydrolase TPCCA_0160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPCCA_0160 PF03129 Anticodon binding domain TPCCA_0160 PF04073 Aminoacyl-tRNA editing domain TPCCA_0162 PF05491 Holliday junction DNA helicase ruvB C-terminus TPCCA_0162 PF05496 Holliday junction DNA helicase ruvB N-terminus TPCCA_0163 PF01297 Periplasmic solute binding protein family TPCCA_0164 PF00005 ABC transporter TPCCA_0165 PF00950 TPCCA_0165 TPCCA_0166 PF00950 TPCCA_0166 TPCCA_0167 PF01325 Iron dependent repressor, N-terminal DNA binding domain TPCCA_0167 PF02742 Iron dependent repressor, metal binding and dimerisation domain TPCCA_0168 PF00300 Histidine phosphatase superfamily (branch 1) TPCCA_0170 PF01048 Phosphorylase superfamily TPCCA_0171 PF04205 FMN-binding domain TPCCA_0174 PF01973 TPCCA_0174 TPCCA_0177 PF01973 TPCCA_0177 TPCCA_0181 PF04977 Septum formation initiator TPCCA_0182 PF01300 Telomere recombination TPCCA_0184 PF01668 SmpB protein TPCCA_0185 PF00717 Peptidase S24-like TPCCA_0186 PF04055 Radical SAM superfamily TPCCA_0186 PF06969 HemN C-terminal domain TPCCA_0187 PF00009 Elongation factor Tu GTP binding domain TPCCA_0187 PF03143 Elongation factor Tu C-terminal domain TPCCA_0187 PF03144 Elongation factor Tu domain 2 TPCCA_0188 PF00338 Ribosomal protein S10p/S20e TPCCA_0189 PF00297 Ribosomal protein L3 TPCCA_0190 PF00573 Ribosomal protein L4/L1 family TPCCA_0191 PF00276 Ribosomal protein L23 TPCCA_0192 PF00181 Ribosomal Proteins L2, RNA binding domain TPCCA_0192 PF03947 Ribosomal Proteins L2, C-terminal domain TPCCA_0193 PF00203 Ribosomal protein S19 TPCCA_0194 PF00237 Ribosomal protein L22p/L17e TPCCA_0195 PF00189 Ribosomal protein S3, C-terminal domain TPCCA_0195 PF07650 KH domain TPCCA_0196 PF00252 Ribosomal protein L16p/L10e TPCCA_0197 PF00831 Ribosomal L29 protein TPCCA_0198 PF00366 Ribosomal protein S17 TPCCA_0199 PF00238 Ribosomal protein L14p/L23e TPCCA_0200 PF00467 KOW motif TPCCA_0200 PF17136 TPCCA_0200 TPCCA_0201 PF00281 Ribosomal protein L5 TPCCA_0201 PF00673 ribosomal L5P family C-terminus TPCCA_0203 PF00410 Ribosomal protein S8 TPCCA_0204 PF00347 Ribosomal protein L6 TPCCA_0205 PF00861 Ribosomal L18p/L5e family TPCCA_0206 PF00333 Ribosomal protein S5, N-terminal domain TPCCA_0206 PF03719 Ribosomal protein S5, C-terminal domain TPCCA_0206a PF00327 Ribosomal protein L30p/L7e TPCCA_0207 PF00828 Ribosomal protein L18e/L15 TPCCA_0208 PF00344 SecY translocase TPCCA_0209 PF00444 Ribosomal protein L36 TPCCA_0210 PF00416 Ribosomal protein S13/S18 TPCCA_0211 PF00411 Ribosomal protein S11 TPCCA_0212 PF01000 RNA polymerase Rpb3/RpoA insert domain TPCCA_0212 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TPCCA_0212 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TPCCA_0213 PF01196 Ribosomal protein L17 TPCCA_0215 PF01025 GrpE TPCCA_0216 PF00012 Hsp70 protein TPCCA_0217 PF00226 DnaJ domain TPCCA_0217 PF00684 DnaJ central domain TPCCA_0217 PF01556 DnaJ C terminal domain TPCCA_0218 PF07228 Stage II sporulation protein E (SpoIIE) TPCCA_0219 PF07228 Stage II sporulation protein E (SpoIIE) TPCCA_0220 PF01740 STAS domain TPCCA_0221 PF02557 D-alanyl-D-alanine carboxypeptidase TPCCA_0223 PF00155 Aminotransferase class I and II TPCCA_0225 PF13306 Leucine rich repeats (6 copies) TPCCA_0226 PF02361 Cobalt transport protein TPCCA_0227 PF00005 ABC transporter TPCCA_0228 PF02632 BioY family TPCCA_0229 PF03167 Uracil DNA glycosylase superfamily TPCCA_0230 PF00270 DEAD/DEAH box helicase TPCCA_0230 PF00271 Helicase conserved C-terminal domain TPCCA_0231 PF00849 RNA pseudouridylate synthase TPCCA_0233 PF01740 STAS domain TPCCA_0234 PF00471 Ribosomal protein L33 TPCCA_0235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TPCCA_0236 PF00467 KOW motif TPCCA_0236 PF02357 Transcription termination factor nusG TPCCA_0237 PF00298 Ribosomal protein L11, RNA binding domain TPCCA_0237 PF03946 Ribosomal protein L11, N-terminal domain TPCCA_0238 PF00687 Ribosomal protein L1p/L10e family TPCCA_0239 PF00466 Ribosomal protein L10 TPCCA_0240 PF00542 Ribosomal protein L7/L12 C-terminal domain TPCCA_0240 PF16320 TPCCA_0240 TPCCA_0241 PF00562 RNA polymerase Rpb2, domain 6 TPCCA_0241 PF04560 RNA polymerase Rpb2, domain 7 TPCCA_0241 PF04561 RNA polymerase Rpb2, domain 2 TPCCA_0241 PF04563 RNA polymerase beta subunit TPCCA_0241 PF04565 RNA polymerase Rpb2, domain 3 TPCCA_0241 PF10385 RNA polymerase beta subunit external 1 domain TPCCA_0242 PF00623 RNA polymerase Rpb1, domain 2 TPCCA_0242 PF04983 RNA polymerase Rpb1, domain 3 TPCCA_0242 PF04997 RNA polymerase Rpb1, domain 1 TPCCA_0242 PF04998 RNA polymerase Rpb1, domain 5 TPCCA_0242 PF05000 RNA polymerase Rpb1, domain 4 TPCCA_0243 PF00164 Ribosomal protein S12/S23 TPCCA_0244 PF00177 Ribosomal protein S7p/S5e TPCCA_0246 PF00092 von Willebrand factor type A domain TPCCA_0247 PF01520 N-acetylmuramoyl-L-alanine amidase TPCCA_0247 PF07833 Copper amine oxidase N-terminal domain TPCCA_0249 PF04620 TPCCA_0249 TPCCA_0252 PF00795 Carbon-nitrogen hydrolase TPCCA_0253 PF04519 TPCCA_0253 TPCCA_0254 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_0254 PF07497 Rho termination factor, RNA-binding domain TPCCA_0254 PF07498 Rho termination factor, N-terminal domain TPCCA_0255 PF01197 Ribosomal protein L31 TPCCA_0256 PF01066 CDP-alcohol phosphatidyltransferase TPCCA_0257 PF03009 Glycerophosphoryl diester phosphodiesterase family TPCCA_0259 PF01476 LysM domain TPCCA_0260 PF08239 Bacterial SH3 domain TPCCA_0261 PF00027 Cyclic nucleotide-binding domain TPCCA_0261 PF00515 Tetratricopeptide repeat TPCCA_0261 PF13174 Tetratricopeptide repeat TPCCA_0262 PF00027 Cyclic nucleotide-binding domain TPCCA_0262 PF13545 Crp-like helix-turn-helix domain TPCCA_0263 PF00041 Fibronectin type III domain TPCCA_0263 PF13385 Concanavalin A-like lectin/glucanases superfamily TPCCA_0264 PF01791 DeoC/LacD family aldolase TPCCA_0265 PF05525 TPCCA_0265 TPCCA_0267 PF04519 TPCCA_0267 TPCCA_0268 PF07719 Tetratricopeptide repeat TPCCA_0268 PF13429 Tetratricopeptide repeat TPCCA_0269 PF00919 Uncharacterized protein family UPF0004 TPCCA_0269 PF04055 Radical SAM superfamily TPCCA_0270 PF01743 Poly A polymerase head domain TPCCA_0270 PF12627 Probable RNA and SrmB- binding site of polymerase A TPCCA_0270 PF13735 tRNA nucleotidyltransferase domain 2 putative TPCCA_0271 PF02195 ParB-like nuclease domain TPCCA_0272 PF13614 AAA domain TPCCA_0274 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TPCCA_0275 PF03808 TPCCA_0275 TPCCA_0276 PF04452 RNA methyltransferase TPCCA_0277 PF03572 Peptidase family S41 TPCCA_0279 PF00575 S1 RNA binding domain TPCCA_0279 PF02224 Cytidylate kinase TPCCA_0283 PF01467 Cytidylyltransferase TPCCA_0284 PF13186 Iron-sulfur cluster-binding domain TPCCA_0288 PF02348 Cytidylyltransferase TPCCA_0288 PF13489 Methyltransferase domain TPCCA_0290 PF08282 haloacid dehalogenase-like hydrolase TPCCA_0291 PF01070 FMN-dependent dehydrogenase TPCCA_0292 PF00691 OmpA family TPCCA_0294 PF00156 Phosphoribosyl transferase domain TPCCA_0294 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TPCCA_0295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TPCCA_0296 PF01121 Dephospho-CoA kinase TPCCA_0297 PF05036 Sporulation related domain TPCCA_0298 PF02608 Basic membrane protein TPCCA_0300 PF00005 ABC transporter TPCCA_0301 PF02653 TPCCA_0301 TPCCA_0302 PF02653 TPCCA_0302 TPCCA_0303 PF01119 DNA mismatch repair protein, C-terminal domain TPCCA_0303 PF08676 MutL C terminal dimerisation domain TPCCA_0303 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPCCA_0305 PF00117 Glutamine amidotransferase class-I TPCCA_0305 PF06418 CTP synthase N-terminus TPCCA_0306 PF00163 Ribosomal protein S4/S9 N-terminal domain TPCCA_0306 PF01479 S4 domain TPCCA_0307 PF03793 PASTA domain TPCCA_0308 PF00497 Bacterial extracellular solute-binding proteins, family 3 TPCCA_0309 PF00497 Bacterial extracellular solute-binding proteins, family 3 TPCCA_0310 PF00436 Single-strand binding protein family TPCCA_0312 PF04018 TPCCA_0312 TPCCA_0313a PF10895 TPCCA_0313a TPCCA_0315 PF10895 TPCCA_0315 TPCCA_0316 PF02707 TPCCA_0316 TPCCA_0316 PF02722 TPCCA_0316 TPCCA_0317 PF02707 TPCCA_0317 TPCCA_0319 PF02608 Basic membrane protein TPCCA_0321 PF00005 ABC transporter TPCCA_0322 PF02653 TPCCA_0322 TPCCA_0323 PF02653 TPCCA_0323 TPCCA_0326 PF01103 Surface antigen TPCCA_0326 PF07244 Surface antigen variable number repeat TPCCA_0327 PF03938 Outer membrane protein (OmpH-like) TPCCA_0328 PF00488 MutS domain V TPCCA_0328 PF01624 MutS domain I TPCCA_0328 PF05188 MutS domain II TPCCA_0328 PF05190 MutS family domain IV TPCCA_0328 PF05192 MutS domain III TPCCA_0329 PF00464 Serine hydroxymethyltransferase TPCCA_0330 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_0331 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TPCCA_0331 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TPCCA_0333 PF03548 Outer membrane lipoprotein carrier protein LolA TPCCA_0334 PF13413 Helix-turn-helix domain TPCCA_0335 PF02517 CAAX protease self-immunity TPCCA_0336 PF03772 TPCCA_0336 TPCCA_0337 PF00398 Ribosomal RNA adenine dimethylase TPCCA_0339 PF00849 RNA pseudouridylate synthase TPCCA_0340 PF02875 Mur ligase family, glutamate ligase domain TPCCA_0340 PF08245 Mur ligase middle domain TPCCA_0341 PF01225 Mur ligase family, catalytic domain TPCCA_0341 PF02875 Mur ligase family, glutamate ligase domain TPCCA_0341 PF08245 Mur ligase middle domain TPCCA_0342 PF13189 Cytidylate kinase-like family TPCCA_0343 PF00633 Helix-hairpin-helix motif TPCCA_0343 PF00730 HhH-GPD superfamily base excision DNA repair protein TPCCA_0344 PF00270 DEAD/DEAH box helicase TPCCA_0344 PF00271 Helicase conserved C-terminal domain TPCCA_0344 PF02559 CarD-like/TRCF domain TPCCA_0344 PF03461 TRCF domain TPCCA_0345 PF00953 Glycosyl transferase family 4 TPCCA_0346 PF10895 TPCCA_0346 TPCCA_0347 PF10895 TPCCA_0347 TPCCA_0348 PF07456 TPCCA_0348 TPCCA_0349 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPCCA_0350 PF00171 Aldehyde dehydrogenase family TPCCA_0351 PF00696 Amino acid kinase family TPCCA_0352 PF02229 Transcriptional Coactivator p15 (PC4) TPCCA_0353 PF00075 RNase H TPCCA_0354 PF02223 Thymidylate kinase TPCCA_0356 PF00076 RNA recognition motif TPCCA_0357 PF02237 Biotin protein ligase C terminal domain TPCCA_0357 PF03099 Biotin/lipoate A/B protein ligase family TPCCA_0358 PF03065 Glycosyl hydrolase family 57 TPCCA_0358 PF09210 Domain of unknown function (DUF1957) TPCCA_0359 PF16258 TPCCA_0359 TPCCA_0361 PF01553 Acyltransferase TPCCA_0362 PF00830 Ribosomal L28 family TPCCA_0363 PF01584 CheW-like domain TPCCA_0363 PF01627 Hpt domain TPCCA_0363 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPCCA_0363 PF02895 Signal transducing histidine kinase, homodimeric domain TPCCA_0363 PF07194 P2 response regulator binding domain TPCCA_0364 PF01584 CheW-like domain TPCCA_0364 PF01739 CheR methyltransferase, SAM binding domain TPCCA_0365 PF13690 Chemotaxis phosphatase CheX TPCCA_0366 PF00072 Response regulator receiver domain TPCCA_0367 PF02463 RecF/RecN/SMC N terminal domain TPCCA_0369 PF13525 Outer membrane lipoprotein TPCCA_0371 PF00288 GHMP kinases N terminal domain TPCCA_0371 PF08544 GHMP kinases C terminal TPCCA_0372 PF01386 Ribosomal L25p family TPCCA_0372 PF14693 Ribosomal protein TL5, C-terminal domain TPCCA_0373 PF01171 PP-loop family TPCCA_0374a PF08348 TPCCA_0374a TPCCA_0374a PF13309 TPCCA_0374a TPCCA_0379 PF01043 SecA preprotein cross-linking domain TPCCA_0379 PF02810 SEC-C motif TPCCA_0379 PF07516 SecA Wing and Scaffold domain TPCCA_0379 PF07517 SecA DEAD-like domain TPCCA_0380 PF04851 Type III restriction enzyme, res subunit TPCCA_0380 PF13625 TPCCA_0380 TPCCA_0380 PF16203 TPCCA_0380 TPCCA_0381 PF09529 TPCCA_0381 TPCCA_0383 PF02381 MraZ protein TPCCA_0384 PF01795 MraW methylase family TPCCA_0386 PF01225 Mur ligase family, catalytic domain TPCCA_0386 PF02875 Mur ligase family, glutamate ligase domain TPCCA_0386 PF08245 Mur ligase middle domain TPCCA_0387 PF01098 TPCCA_0387 TPCCA_0388 PF08478 POTRA domain, FtsQ-type TPCCA_0389 PF02491 SHS2 domain inserted in FTSA TPCCA_0389 PF14450 Cell division protein FtsA TPCCA_0390 PF00091 Tubulin/FtsZ family, GTPase domain TPCCA_0390 PF12327 FtsZ family, C-terminal domain TPCCA_0391 PF00589 Phage integrase family TPCCA_0391 PF02899 Phage integrase, N-terminal SAM-like domain TPCCA_0392 PF14559 Tetratricopeptide repeat TPCCA_0393 PF02481 DNA recombination-mediator protein A TPCCA_0394 PF01131 DNA topoisomerase TPCCA_0394 PF01396 TPCCA_0394 TPCCA_0394 PF01751 Toprim domain TPCCA_0395 PF00589 Phage integrase family TPCCA_0395 PF02899 Phage integrase, N-terminal SAM-like domain TPCCA_0396 PF00460 Flagella basal body rod protein TPCCA_0397 PF00460 Flagella basal body rod protein TPCCA_0397 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_0398 PF02049 TPCCA_0398 TPCCA_0399 PF01514 Secretory protein of YscJ/FliF family TPCCA_0399 PF08345 TPCCA_0399 TPCCA_0400 PF01706 FliG C-terminal domain TPCCA_0400 PF14841 FliG middle domain TPCCA_0400 PF14842 FliG N-terminal domain TPCCA_0401 PF02108 TPCCA_0401 TPCCA_0402 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_0402 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_0403 PF02050 Flagellar FliJ protein TPCCA_0405 PF13599 Pentapeptide repeats (9 copies) TPCCA_0406 PF01177 Asp/Glu/Hydantoin racemase TPCCA_0407 PF13419 Haloacid dehalogenase-like hydrolase TPCCA_0409a PF02699 Preprotein translocase subunit TPCCA_0410 PF02355 Protein export membrane protein TPCCA_0411 PF02355 Protein export membrane protein TPCCA_0412 PF11680 Protein of unknown function (DUF3276) TPCCA_0413 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPCCA_0413 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPCCA_0414 PF01235 TPCCA_0414 TPCCA_0416 PF00448 SRP54-type protein, GTPase domain TPCCA_0416 PF02881 SRP54-type protein, helical bundle domain TPCCA_0416 PF02978 Signal peptide binding domain TPCCA_0417 PF00795 Carbon-nitrogen hydrolase TPCCA_0418 PF08544 GHMP kinases C terminal TPCCA_0418 PF10509 Galactokinase galactose-binding signature TPCCA_0419 PF01975 Survival protein SurE TPCCA_0421 PF13414 TPR repeat TPCCA_0426 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_0426 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_0426 PF16886 TPCCA_0426 TPCCA_0427 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_0427 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_0428 PF01813 ATP synthase subunit D TPCCA_0430 PF00137 ATP synthase subunit C TPCCA_0431 PF03309 Type III pantothenate kinase TPCCA_0435 PF04170 NlpE N-terminal domain TPCCA_0436 PF01368 DHH family TPCCA_0436 PF02272 DHHA1 domain TPCCA_0438 PF01725 Ham1 family TPCCA_0439 PF01584 CheW-like domain TPCCA_0440 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TPCCA_0441 PF01513 ATP-NAD kinase TPCCA_0442 PF02463 RecF/RecN/SMC N terminal domain TPCCA_0444 PF01476 LysM domain TPCCA_0444 PF01551 Peptidase family M23 TPCCA_0445 PF01965 DJ-1/PfpI family TPCCA_0446 PF04551 GcpE protein TPCCA_0448 PF14681 Uracil phosphoribosyltransferase TPCCA_0450 PF00009 Elongation factor Tu GTP binding domain TPCCA_0450 PF00679 Elongation factor G C-terminus TPCCA_0450 PF03144 Elongation factor Tu domain 2 TPCCA_0450 PF03764 Elongation factor G, domain IV TPCCA_0450 PF14492 Elongation Factor G, domain II TPCCA_0452 PF00133 tRNA synthetases class I (I, L, M and V) TPCCA_0452 PF08264 Anticodon-binding domain of tRNA TPCCA_0458 PF04079 Putative transcriptional regulators (Ypuh-like) TPCCA_0459 PF00849 RNA pseudouridylate synthase TPCCA_0459 PF01479 S4 domain TPCCA_0460 PF13181 Tetratricopeptide repeat TPCCA_0464 PF02390 Putative methyltransferase TPCCA_0468 PF13432 Tetratricopeptide repeat TPCCA_0470 PF13432 Tetratricopeptide repeat TPCCA_0470 PF14559 Tetratricopeptide repeat TPCCA_0471 PF04471 Restriction endonuclease TPCCA_0471 PF13432 Tetratricopeptide repeat TPCCA_0472 PF01541 GIY-YIG catalytic domain TPCCA_0472 PF02151 UvrB/uvrC motif TPCCA_0472 PF08459 UvrC Helix-hairpin-helix N-terminal TPCCA_0474 PF01709 Transcriptional regulator TPCCA_0475 PF00342 Phosphoglucose isomerase TPCCA_0476 PF00871 Acetokinase family TPCCA_0477 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TPCCA_0478 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TPCCA_0478 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TPCCA_0479 PF10895 TPCCA_0479 TPCCA_0484 PF04773 FecR protein TPCCA_0485 PF00211 Adenylate and Guanylate cyclase catalytic domain TPCCA_0485 PF00672 HAMP domain TPCCA_0486 PF05262 TPCCA_0486 TPCCA_0488 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPCCA_0488 PF02743 Cache domain TPCCA_0489 PF12706 Beta-lactamase superfamily domain TPCCA_0491 PF02618 YceG-like family TPCCA_0492 PF01807 CHC2 zinc finger TPCCA_0492 PF08275 DNA primase catalytic core, N-terminal domain TPCCA_0492 PF13155 Toprim-like TPCCA_0493 PF00140 Sigma-70 factor, region 1 TPCCA_0493 PF03979 Sigma-70 factor, region 1 TPCCA_0493 PF04539 Sigma-70 region 3 TPCCA_0493 PF04542 Sigma-70 region 2 TPCCA_0493 PF04545 Sigma-70, region 4 TPCCA_0494 PF02591 Putative zinc ribbon domain TPCCA_0496 PF13432 Tetratricopeptide repeat TPCCA_0497 PF06723 MreB/Mbl protein TPCCA_0498 PF04085 rod shape-determining protein MreC TPCCA_0499 PF04093 TPCCA_0499 TPCCA_0500 PF00905 Penicillin binding protein transpeptidase domain TPCCA_0500 PF03717 Penicillin-binding Protein dimerisation domain TPCCA_0501 PF01098 TPCCA_0501 TPCCA_0502 PF12796 Ankyrin repeats (3 copies) TPCCA_0505 PF00349 Hexokinase TPCCA_0505 PF03727 Hexokinase TPCCA_0506 PF05697 Bacterial trigger factor protein (TF) TPCCA_0506 PF05698 Bacterial trigger factor protein (TF) C-terminus TPCCA_0507 PF00574 Clp protease TPCCA_0508 PF06689 ClpX C4-type zinc finger TPCCA_0508 PF07724 AAA domain (Cdc48 subfamily) TPCCA_0508 PF10431 C-terminal, D2-small domain, of ClpB protein TPCCA_0509 PF00578 AhpC/TSA family TPCCA_0509 PF10417 C-terminal domain of 1-Cys peroxiredoxin TPCCA_0510 PF00009 Elongation factor Tu GTP binding domain TPCCA_0510 PF00679 Elongation factor G C-terminus TPCCA_0510 PF03144 Elongation factor Tu domain 2 TPCCA_0510 PF06421 GTP-binding protein LepA C-terminus TPCCA_0510 PF14492 Elongation Factor G, domain II TPCCA_0511 PF02559 CarD-like/TRCF domain TPCCA_0512 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TPCCA_0512 PF02542 YgbB family TPCCA_0513 PF02080 TrkA-C domain TPCCA_0513 PF02254 TrkA-N domain TPCCA_0514 PF00005 ABC transporter TPCCA_0515 PF04453 Organic solvent tolerance protein TPCCA_0516 PF03023 TPCCA_0516 TPCCA_0517 PF02075 Crossover junction endodeoxyribonuclease RuvC TPCCA_0518 PF04263 Thiamin pyrophosphokinase, catalytic domain TPCCA_0519 PF00072 Response regulator receiver domain TPCCA_0519 PF00158 Sigma-54 interaction domain TPCCA_0519 PF02954 Bacterial regulatory protein, Fis family TPCCA_0520 PF00512 His Kinase A (phospho-acceptor) domain TPCCA_0520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPCCA_0521 PF13177 DNA polymerase III, delta subunit TPCCA_0522 PF02674 TPCCA_0522 TPCCA_0523 PF03033 Glycosyltransferase family 28 N-terminal domain TPCCA_0523 PF04101 Glycosyltransferase family 28 C-terminal domain TPCCA_0524 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_0524 PF02190 ATP-dependent protease La (LON) domain TPCCA_0524 PF05362 Lon protease (S16) C-terminal proteolytic domain TPCCA_0525 PF01132 Elongation factor P (EF-P) OB domain TPCCA_0525 PF08207 Elongation factor P (EF-P) KOW-like domain TPCCA_0525 PF09285 Elongation factor P, C-terminal TPCCA_0526 PF00270 DEAD/DEAH box helicase TPCCA_0526 PF00271 Helicase conserved C-terminal domain TPCCA_0526 PF04408 Helicase associated domain (HA2) TPCCA_0526 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TPCCA_0527 PF01813 ATP synthase subunit D TPCCA_0528 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_0528 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_0529 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_0529 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_0529 PF16886 TPCCA_0529 TPCCA_0531 PF01990 ATP synthase (F/14-kDa) subunit TPCCA_0531a PF00137 ATP synthase subunit C TPCCA_0533 PF01496 V-type ATPase 116kDa subunit family TPCCA_0534 PF01992 ATP synthase (C/AC39) subunit TPCCA_0536 PF03840 Preprotein translocase SecG subunit TPCCA_0537 PF00121 Triosephosphate isomerase TPCCA_0538 PF00162 Phosphoglycerate kinase TPCCA_0540 PF01740 STAS domain TPCCA_0541 PF01926 50S ribosome-binding GTPase TPCCA_0541 PF07650 KH domain TPCCA_0542 PF00365 Phosphofructokinase TPCCA_0543 PF01330 RuvA N terminal domain TPCCA_0543 PF14520 Helix-hairpin-helix domain TPCCA_0544 PF03372 Endonuclease/Exonuclease/phosphatase family TPCCA_0545 PF13407 Periplasmic binding protein domain TPCCA_0546 PF13365 Trypsin-like peptidase domain TPCCA_0547 PF02401 LytB protein TPCCA_0548 PF03687 TPCCA_0548 TPCCA_0549 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_0549 PF02861 Clp amino terminal domain TPCCA_0549 PF07724 AAA domain (Cdc48 subfamily) TPCCA_0549 PF10431 C-terminal, D2-small domain, of ClpB protein TPCCA_0550 PF01926 50S ribosome-binding GTPase TPCCA_0550 PF10396 GTP-binding protein TrmE N-terminus TPCCA_0550 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE TPCCA_0551 PF01569 PAP2 superfamily TPCCA_0553 PF01594 TPCCA_0553 TPCCA_0554 PF13419 Haloacid dehalogenase-like hydrolase TPCCA_0555 PF00375 Sodium:dicarboxylate symporter family TPCCA_0556 PF03590 Aspartate-ammonia ligase TPCCA_0557 PF06226 TPCCA_0557 TPCCA_0558 PF03824 TPCCA_0558 TPCCA_0559 PF02568 Thiamine biosynthesis protein (ThiI) TPCCA_0559 PF02926 THUMP domain TPCCA_0560 PF00456 Transketolase, thiamine diphosphate binding domain TPCCA_0560 PF02779 Transketolase, pyrimidine binding domain TPCCA_0561 PF04536 TLP18 TPCCA_0562 PF03102 NeuB family TPCCA_0565 PF04311 TPCCA_0565 TPCCA_0566 PF03062 TPCCA_0566 TPCCA_0568 PF01081 KDPG and KHG aldolase TPCCA_0569 PF00557 Metallopeptidase family M24 TPCCA_0569 PF01321 Creatinase/Prolidase N-terminal domain TPCCA_0569 PF16188 TPCCA_0569 TPCCA_0569 PF16189 TPCCA_0569 TPCCA_0571 PF04011 LemA family TPCCA_0572 PF01794 TPCCA_0572 TPCCA_0572 PF04205 FMN-binding domain TPCCA_0574 PF14888 Penicillin-binding protein Tp47 domain C TPCCA_0574 PF14889 Penicillin-binding protein Tp47 domain a TPCCA_0575 PF00391 PEP-utilising enzyme, mobile domain TPCCA_0575 PF02896 PEP-utilising enzyme, TIM barrel domain TPCCA_0575 PF05524 PEP-utilising enzyme, N-terminal TPCCA_0576 PF00472 RF-1 domain TPCCA_0576 PF03462 PCRF domain TPCCA_0578 PF00448 SRP54-type protein, GTPase domain TPCCA_0578 PF02881 SRP54-type protein, helical bundle domain TPCCA_0580 PF02687 TPCCA_0580 TPCCA_0580 PF12704 MacB-like periplasmic core domain TPCCA_0581 PF00005 ABC transporter TPCCA_0582 PF02687 TPCCA_0582 TPCCA_0582 PF12704 MacB-like periplasmic core domain TPCCA_0585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPCCA_0586 PF08264 Anticodon-binding domain of tRNA TPCCA_0586 PF09334 tRNA synthetases class I (M) TPCCA_0586 PF13603 Leucyl-tRNA synthetase, Domain 2 TPCCA_0587 PF06144 DNA polymerase III, delta subunit TPCCA_0589 PF00381 PTS HPr component phosphorylation site TPCCA_0591 PF02603 HPr Serine kinase N terminus TPCCA_0591 PF07475 HPr Serine kinase C-terminal domain TPCCA_0592 PF13539 D-alanyl-D-alanine carboxypeptidase TPCCA_0594 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) TPCCA_0595 PF00406 Adenylate kinase TPCCA_0595 PF05191 Adenylate kinase, active site lid TPCCA_0596 PF01743 Poly A polymerase head domain TPCCA_0596 PF12627 Probable RNA and SrmB- binding site of polymerase A TPCCA_0599 PF14353 TPCCA_0599 TPCCA_0600 PF02163 Peptidase family M50 TPCCA_0600 PF13180 PDZ domain TPCCA_0601 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TPCCA_0601 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal TPCCA_0601 PF13288 DXP reductoisomerase C-terminal domain TPCCA_0602 PF01148 Cytidylyltransferase family TPCCA_0603 PF01255 Putative undecaprenyl diphosphate synthase TPCCA_0604 PF01765 Ribosome recycling factor TPCCA_0605 PF00889 Elongation factor TS TPCCA_0606 PF00318 Ribosomal protein S2 TPCCA_0608 PF13646 HEAT repeats TPCCA_0609 PF00152 tRNA synthetases class II (D, K and N) TPCCA_0609 PF01336 OB-fold nucleic acid binding domain TPCCA_0610 PF02707 TPCCA_0610 TPCCA_0610 PF02722 TPCCA_0610 TPCCA_0611 PF00005 ABC transporter TPCCA_0612 PF01458 Uncharacterized protein family (UPF0051) TPCCA_0613 PF01458 Uncharacterized protein family (UPF0051) TPCCA_0614 PF00266 Aminotransferase class-V TPCCA_0615 PF01592 NifU-like N terminal domain TPCCA_0616 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TPCCA_0617 PF10895 TPCCA_0617 TPCCA_0622 PF13432 Tetratricopeptide repeat TPCCA_0623 PF01464 Transglycosylase SLT domain TPCCA_0623 PF01476 LysM domain TPCCA_0624 PF00691 OmpA family TPCCA_0626 PF00149 Calcineurin-like phosphoesterase TPCCA_0627 PF13476 AAA domain TPCCA_0627 PF13558 Putative exonuclease SbcCD, C subunit TPCCA_0628 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TPCCA_0630 PF01739 CheR methyltransferase, SAM binding domain TPCCA_0630 PF03705 CheR methyltransferase, all-alpha domain TPCCA_0631 PF00072 Response regulator receiver domain TPCCA_0631 PF01339 CheB methylesterase TPCCA_0632 PF00579 tRNA synthetases class I (W and Y) TPCCA_0633 PF01625 Peptide methionine sulfoxide reductase TPCCA_0633 PF01641 SelR domain TPCCA_0634 PF00533 BRCA1 C Terminus (BRCT) domain TPCCA_0634 PF01653 NAD-dependent DNA ligase adenylation domain TPCCA_0634 PF03120 NAD-dependent DNA ligase OB-fold domain TPCCA_0634 PF12826 Helix-hairpin-helix motif TPCCA_0636 PF02565 Recombination protein O C terminal TPCCA_0637 PF01715 IPP transferase TPCCA_0639 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPCCA_0640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPCCA_0641 PF13393 Histidyl-tRNA synthetase TPCCA_0642 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPCCA_0642 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPCCA_0642 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPCCA_0642 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPCCA_0643 PF00929 Exonuclease TPCCA_0644 PF01921 tRNA synthetases class I (K) TPCCA_0647 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPCCA_0647 PF02403 Seryl-tRNA synthetase N-terminal domain TPCCA_0648 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 TPCCA_0648 PF13432 Tetratricopeptide repeat TPCCA_0648 PF14559 Tetratricopeptide repeat TPCCA_0649 PF00571 CBS domain TPCCA_0649 PF03471 Transporter associated domain TPCCA_0650 PF02130 Uncharacterized protein family UPF0054 TPCCA_0651 PF01966 HD domain TPCCA_0651 PF07697 TPCCA_0651 TPCCA_0651 PF07698 TPCCA_0651 TPCCA_0652 PF00005 ABC transporter TPCCA_0652 PF08402 TOBE domain TPCCA_0653 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_0654 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_0655 PF13416 Bacterial extracellular solute-binding protein TPCCA_0657 PF02599 Global regulator protein family TPCCA_0658 PF02623 FliW protein TPCCA_0659 PF00669 Bacterial flagellin N-terminal helical region TPCCA_0659 PF07196 Flagellin hook IN motif TPCCA_0660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_0660 PF07196 Flagellin hook IN motif TPCCA_0662 PF01116 Fructose-bisphosphate aldolase class-II TPCCA_0663 PF04620 TPCCA_0663 TPCCA_0664 PF04620 TPCCA_0664 TPCCA_0667 PF00485 Phosphoribulokinase / Uridine kinase family TPCCA_0668 PF02325 TPCCA_0668 TPCCA_0669 PF02811 PHP domain TPCCA_0669 PF07733 Bacterial DNA polymerase III alpha subunit TPCCA_0669 PF14579 Helix-hairpin-helix motif TPCCA_0670 PF01820 D-ala D-ala ligase N-terminus TPCCA_0670 PF07478 D-ala D-ala ligase C-terminus TPCCA_0671 PF01066 CDP-alcohol phosphatidyltransferase TPCCA_0672 PF03129 Anticodon binding domain TPCCA_0673 PF00749 tRNA synthetases class I (E and Q), catalytic domain TPCCA_0674 PF01713 Smr domain TPCCA_0675 PF01963 TPCCA_0675 TPCCA_0680 PF00814 Glycoprotease family TPCCA_0681 PF00842 Alanine racemase, C-terminal domain TPCCA_0681 PF01168 Alanine racemase, N-terminal domain TPCCA_0682 PF01728 FtsJ-like methyltransferase TPCCA_0683 PF00348 Polyprenyl synthetase TPCCA_0684 PF13407 Periplasmic binding protein domain TPCCA_0685 PF00005 ABC transporter TPCCA_0686 PF02653 TPCCA_0686 TPCCA_0687 PF00270 DEAD/DEAH box helicase TPCCA_0687 PF00271 Helicase conserved C-terminal domain TPCCA_0687 PF17191 TPCCA_0687 TPCCA_0688 PF02016 LD-carboxypeptidase TPCCA_0689 PF01926 50S ribosome-binding GTPase TPCCA_0689 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TPCCA_0691 PF02616 ScpA/B protein TPCCA_0692 PF00154 recA bacterial DNA recombination protein TPCCA_0694 PF01812 5-formyltetrahydrofolate cyclo-ligase family TPCCA_0695 PF13535 ATP-grasp domain TPCCA_0697 PF10895 TPCCA_0697 TPCCA_0698 PF10895 TPCCA_0698 TPCCA_0701 PF01192 RNA polymerase Rpb6 TPCCA_0702 PF01551 Peptidase family M23 TPCCA_0704 PF01368 DHH family TPCCA_0704 PF02272 DHHA1 domain TPCCA_0705 PF00905 Penicillin binding protein transpeptidase domain TPCCA_0705 PF00912 Transglycosylase TPCCA_0706 PF01476 LysM domain TPCCA_0706 PF01551 Peptidase family M23 TPCCA_0709 PF04539 Sigma-70 region 3 TPCCA_0709 PF04542 Sigma-70 region 2 TPCCA_0709 PF04545 Sigma-70, region 4 TPCCA_0710 PF03961 TPCCA_0710 TPCCA_0710 PF14804 Jag N-terminus TPCCA_0712 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TPCCA_0713 PF00448 SRP54-type protein, GTPase domain TPCCA_0714 PF00771 FHIPEP family TPCCA_0715 PF01312 FlhB HrpN YscU SpaS Family TPCCA_0716 PF01311 TPCCA_0716 TPCCA_0717 PF01313 TPCCA_0717 TPCCA_0718 PF00813 TPCCA_0718 TPCCA_0719 PF04347 TPCCA_0719 TPCCA_0720 PF01052 Surface presentation of antigens (SPOA) TPCCA_0721 PF01052 Surface presentation of antigens (SPOA) TPCCA_0721 PF02154 Flagellar motor switch protein FliM TPCCA_0722 PF03748 TPCCA_0722 TPCCA_0724 PF00691 OmpA family TPCCA_0724 PF13677 TPCCA_0724 TPCCA_0725 PF01618 TPCCA_0725 TPCCA_0726 PF06289 TPCCA_0726 TPCCA_0727 PF00460 Flagella basal body rod protein TPCCA_0727 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_0727 PF07559 Flagellar basal body protein FlaE TPCCA_0728 PF03963 TPCCA_0728 TPCCA_0729 PF02120 Flagellar hook-length control protein FliK TPCCA_0730 PF01066 CDP-alcohol phosphatidyltransferase TPCCA_0731 PF00293 NUDIX domain TPCCA_0732 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TPCCA_0732 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TPCCA_0734 PF01048 Phosphorylase superfamily TPCCA_0735 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPCCA_0735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TPCCA_0736 PF00175 Oxidoreductase NAD-binding domain TPCCA_0736 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TPCCA_0737 PF01547 Bacterial extracellular solute-binding protein TPCCA_0738 PF02410 Oligomerisation domain TPCCA_0739 PF03816 Cell envelope-related transcriptional attenuator domain TPCCA_0739 PF13399 LytR cell envelope-related transcriptional attenuator TPCCA_0740 PF01966 HD domain TPCCA_0741 PF01467 Cytidylyltransferase TPCCA_0742 PF01018 GTP1/OBG TPCCA_0742 PF01926 50S ribosome-binding GTPase TPCCA_0743 PF01016 Ribosomal L27 protein TPCCA_0744 PF04327 Protein of unknown function (DUF464) TPCCA_0745 PF00829 Ribosomal prokaryotic L21 protein TPCCA_0746 PF00391 PEP-utilising enzyme, mobile domain TPCCA_0746 PF02896 PEP-utilising enzyme, TIM barrel domain TPCCA_0750 PF13519 von Willebrand factor type A domain TPCCA_0754 PF00919 Uncharacterized protein family UPF0004 TPCCA_0754 PF01938 TRAM domain TPCCA_0754 PF04055 Radical SAM superfamily TPCCA_0755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TPCCA_0755 PF12728 Helix-turn-helix domain TPCCA_0756 PF00551 Formyl transferase TPCCA_0756 PF02911 Formyl transferase, C-terminal domain TPCCA_0757 PF01327 Polypeptide deformylase TPCCA_0758 PF01165 Ribosomal protein S21 TPCCA_0760 PF00905 Penicillin binding protein transpeptidase domain TPCCA_0760 PF03717 Penicillin-binding Protein dimerisation domain TPCCA_0760 PF03793 PASTA domain TPCCA_0762 PF01973 TPCCA_0762 TPCCA_0764 PF01966 HD domain TPCCA_0765 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_0765 PF01434 Peptidase family M41 TPCCA_0767 PF00009 Elongation factor Tu GTP binding domain TPCCA_0767 PF00679 Elongation factor G C-terminus TPCCA_0767 PF03144 Elongation factor Tu domain 2 TPCCA_0767 PF03764 Elongation factor G, domain IV TPCCA_0767 PF14492 Elongation Factor G, domain II TPCCA_0770 PF00270 DEAD/DEAH box helicase TPCCA_0770 PF00271 Helicase conserved C-terminal domain TPCCA_0771 PF01895 PhoU domain TPCCA_0771 PF02690 TPCCA_0771 TPCCA_0773 PF13180 PDZ domain TPCCA_0773 PF13365 Trypsin-like peptidase domain TPCCA_0774 PF02308 TPCCA_0774 TPCCA_0775 PF00730 HhH-GPD superfamily base excision DNA repair protein TPCCA_0778 PF03819 MazG nucleotide pyrophosphohydrolase domain TPCCA_0779 PF09335 TPCCA_0779 TPCCA_0780 PF02540 NAD synthase TPCCA_0785 PF03968 OstA-like protein TPCCA_0786 PF00005 ABC transporter TPCCA_0786 PF12399 Branched-chain amino acid ATP-binding cassette transporter TPCCA_0789 PF17131 TPCCA_0789 TPCCA_0790 PF03176 MMPL family TPCCA_0792 PF00669 Bacterial flagellin N-terminal helical region TPCCA_0792 PF00700 Bacterial flagellin C-terminal helical region TPCCA_0794 PF00438 S-adenosylmethionine synthetase, N-terminal domain TPCCA_0794 PF02772 S-adenosylmethionine synthetase, central domain TPCCA_0794 PF02773 S-adenosylmethionine synthetase, C-terminal domain TPCCA_0796 PF02424 ApbE family TPCCA_0797 PF03807 NADP oxidoreductase coenzyme F420-dependent TPCCA_0797 PF14748 Pyrroline-5-carboxylate reductase dimerisation TPCCA_0798 PF01588 Putative tRNA binding domain TPCCA_0798 PF09334 tRNA synthetases class I (M) TPCCA_0800 PF00768 D-alanyl-D-alanine carboxypeptidase TPCCA_0801 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_0801 PF02861 Clp amino terminal domain TPCCA_0801 PF07724 AAA domain (Cdc48 subfamily) TPCCA_0801 PF10431 C-terminal, D2-small domain, of ClpB protein TPCCA_0803 PF01368 DHH family TPCCA_0804 PF00005 ABC transporter TPCCA_0804 PF08402 TOBE domain TPCCA_0805 PF00773 RNB domain TPCCA_0806 PF02388 FemAB family TPCCA_0807 PF01783 Ribosomal L32p protein family TPCCA_0808 PF00550 Phosphopantetheine attachment site TPCCA_0809 PF00035 Double-stranded RNA binding motif TPCCA_0809 PF14622 Ribonuclease-III-like TPCCA_0810 PF02086 D12 class N6 adenine-specific DNA methyltransferase TPCCA_0812 PF00501 AMP-binding enzyme TPCCA_0814 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPCCA_0815 PF08445 FR47-like protein TPCCA_0817 PF00113 Enolase, C-terminal TIM barrel domain TPCCA_0817 PF03952 Enolase, N-terminal domain TPCCA_0819 PF00753 Metallo-beta-lactamase superfamily TPCCA_0819 PF12706 Beta-lactamase superfamily domain TPCCA_0820 PF13432 Tetratricopeptide repeat TPCCA_0821 PF03180 NLPA lipoprotein TPCCA_0822 PF00924 Mechanosensitive ion channel TPCCA_0823 PF01880 Desulfoferrodoxin TPCCA_0824 PF02779 Transketolase, pyrimidine binding domain TPCCA_0824 PF02780 Transketolase, C-terminal domain TPCCA_0824 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TPCCA_0826 PF02457 DisA bacterial checkpoint controller nucleotide-binding TPCCA_0827 PF07949 YbbR-like protein TPCCA_0828 PF01648 4'-phosphopantetheinyl transferase superfamily TPCCA_0829 PF09986 TPCCA_0829 TPCCA_0830 PF01416 tRNA pseudouridine synthase TPCCA_0831 PF00750 tRNA synthetases class I (R) TPCCA_0831 PF03485 Arginyl tRNA synthetase N terminal domain TPCCA_0831 PF05746 DALR anticodon binding domain TPCCA_0832 PF10646 TPCCA_0832 TPCCA_0834 PF00579 tRNA synthetases class I (W and Y) TPCCA_0835 PF00023 Ankyrin repeat TPCCA_0835 PF12796 Ankyrin repeats (3 copies) TPCCA_0837 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPCCA_0837 PF03129 Anticodon binding domain TPCCA_0837 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPCCA_0838 PF00005 ABC transporter TPCCA_0838 PF12848 ABC transporter TPCCA_0839 PF13349 TPCCA_0839 TPCCA_0841 PF13180 PDZ domain TPCCA_0841 PF13365 Trypsin-like peptidase domain TPCCA_0842 PF00557 Metallopeptidase family M24 TPCCA_0843 PF00226 DnaJ domain TPCCA_0844 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TPCCA_0844 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TPCCA_0845 PF02639 TPCCA_0845 TPCCA_0846 PF05164 Cell division protein ZapA TPCCA_0848 PF00453 Ribosomal protein L20 TPCCA_0849 PF01632 Ribosomal protein L35 TPCCA_0850 PF00707 Translation initiation factor IF-3, C-terminal domain TPCCA_0850 PF05198 Translation initiation factor IF-3, N-terminal domain TPCCA_0851 PF16314 TPCCA_0851 TPCCA_0852 PF01790 TPCCA_0852 TPCCA_0853 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TPCCA_0854 PF00672 HAMP domain TPCCA_0854 PF07228 Stage II sporulation protein E (SpoIIE) TPCCA_0856 PF03687 TPCCA_0856 TPCCA_0858 PF03687 TPCCA_0858 TPCCA_0859 PF03687 TPCCA_0859 TPCCA_0861 PF01380 SIS domain TPCCA_0861 PF13522 Glutamine amidotransferase domain TPCCA_0862 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPCCA_0862 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TPCCA_0863 PF00266 Aminotransferase class-V TPCCA_0864 PF01476 LysM domain TPCCA_0864 PF01551 Peptidase family M23 TPCCA_0865 PF03687 TPCCA_0865 TPCCA_0866 PF01078 Magnesium chelatase, subunit ChlI TPCCA_0866 PF13335 TPCCA_0866 TPCCA_0866 PF13541 Subunit ChlI of Mg-chelatase TPCCA_0868 PF00669 Bacterial flagellin N-terminal helical region TPCCA_0868 PF00700 Bacterial flagellin C-terminal helical region TPCCA_0870 PF00669 Bacterial flagellin N-terminal helical region TPCCA_0870 PF00700 Bacterial flagellin C-terminal helical region TPCCA_0872 PF02465 TPCCA_0872 TPCCA_0872 PF07195 TPCCA_0872 TPCCA_0875 PF02367 Uncharacterised P-loop hydrolase UPF0079 TPCCA_0876 PF00814 Glycoprotease family TPCCA_0877 PF01966 HD domain TPCCA_0878 PF14238 TPCCA_0878 TPCCA_0879 PF09822 TPCCA_0879 TPCCA_0881 PF00005 ABC transporter TPCCA_0883 PF03739 TPCCA_0883 TPCCA_0884 PF03739 TPCCA_0884 TPCCA_0885 PF00692 dUTPase TPCCA_0886 PF00013 KH domain TPCCA_0886 PF00575 S1 RNA binding domain TPCCA_0886 PF01138 3' exoribonuclease family, domain 1 TPCCA_0886 PF03725 3' exoribonuclease family, domain 2 TPCCA_0886 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TPCCA_0887 PF00312 Ribosomal protein S15 TPCCA_0888 PF06574 FAD synthetase TPCCA_0889 PF01509 TruB family pseudouridylate synthase (N terminal domain) TPCCA_0889 PF16198 TPCCA_0889 TPCCA_0890 PF02033 Ribosome-binding factor A TPCCA_0891 PF00009 Elongation factor Tu GTP binding domain TPCCA_0891 PF04760 Translation initiation factor IF-2, N-terminal region TPCCA_0891 PF11987 Translation-initiation factor 2 TPCCA_0892 PF08529 NusA N-terminal domain TPCCA_0892 PF13184 NusA-like KH domain TPCCA_0893 PF02576 Uncharacterised BCR, YhbC family COG0779 TPCCA_0893 PF17384 TPCCA_0893 TPCCA_0894 PF01936 NYN domain TPCCA_0894 PF12872 OST-HTH/LOTUS domain TPCCA_0895 PF03625 Domain of unknown function DUF302 TPCCA_0897 PF02707 TPCCA_0897 TPCCA_0897 PF02722 TPCCA_0897 TPCCA_0898 PF00580 UvrD/REP helicase N-terminal domain TPCCA_0898 PF13361 UvrD-like helicase C-terminal domain TPCCA_0899 PF12705 PD-(D/E)XK nuclease superfamily TPCCA_0901 PF01554 MatE TPCCA_0902 PF12697 Alpha/beta hydrolase family TPCCA_0903 PF02875 Mur ligase family, glutamate ligase domain TPCCA_0903 PF08245 Mur ligase middle domain TPCCA_0905 PF00886 Ribosomal protein S16 TPCCA_0906 PF13083 KH domain TPCCA_0907 PF01782 RimM N-terminal domain TPCCA_0908 PF01746 tRNA (Guanine-1)-methyltransferase TPCCA_0909 PF01245 Ribosomal protein L19 TPCCA_0911 PF01312 FlhB HrpN YscU SpaS Family TPCCA_0912 PF01966 HD domain TPCCA_0912 PF11871 TPCCA_0912 TPCCA_0913 PF02021 Uncharacterised protein family UPF0102 TPCCA_0915 PF04471 Restriction endonuclease TPCCA_0915 PF14559 Tetratricopeptide repeat TPCCA_0917 PF00571 CBS domain TPCCA_0917 PF01769 Divalent cation transporter TPCCA_0917 PF03448 MgtE intracellular N domain TPCCA_0919 PF00085 Thioredoxin TPCCA_0920 PF13432 Tetratricopeptide repeat TPCCA_0921 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPCCA_0921 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPCCA_0921a PF12804 MobA-like NTP transferase domain TPCCA_0923 PF13860 FlgD Ig-like domain TPCCA_0924 PF00575 S1 RNA binding domain TPCCA_0924 PF09371 Tex-like protein N-terminal domain TPCCA_0924 PF12836 Helix-hairpin-helix motif TPCCA_0924 PF16921 TPCCA_0924 TPCCA_0925 PF00258 Flavodoxin TPCCA_0926 PF00717 Peptidase S24-like TPCCA_0930 PF01973 TPCCA_0930 TPCCA_0931 PF01204 Trehalase TPCCA_0933 PF01225 Mur ligase family, catalytic domain TPCCA_0933 PF02875 Mur ligase family, glutamate ligase domain TPCCA_0933 PF08245 Mur ligase middle domain TPCCA_0934 PF00375 Sodium:dicarboxylate symporter family TPCCA_0935 PF07859 alpha/beta hydrolase fold TPCCA_0936 PF03471 Transporter associated domain TPCCA_0937 PF12850 Calcineurin-like phosphoesterase superfamily domain TPCCA_0939 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TPCCA_0939 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPCCA_0939 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPCCA_0939 PF10371 Domain of unknown function TPCCA_0939 PF12838 4Fe-4S dicluster domain TPCCA_0939 PF17147 TPCCA_0939 TPCCA_0943 PF02561 Flagellar protein FliS TPCCA_0945 PF00834 Ribulose-phosphate 3 epimerase family TPCCA_0946 PF02527 rRNA small subunit methyltransferase G TPCCA_0947 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TPCCA_0948 PF01424 R3H domain TPCCA_0948 PF13083 KH domain TPCCA_0948 PF14804 Jag N-terminus TPCCA_0949 PF02096 60Kd inner membrane protein TPCCA_0949 PF14849 YidC periplasmic domain TPCCA_0949a PF01809 TPCCA_0949a TPCCA_0950a PF00825 Ribonuclease P TPCCA_0951 PF00468 Ribosomal protein L34 TPCCA_0952 PF12740 Chlorophyllase enzyme TPCCA_0953 PF01963 TPCCA_0953 TPCCA_0954 PF13176 Tetratricopeptide repeat TPCCA_0954 PF13432 Tetratricopeptide repeat TPCCA_0956 PF16811 TPCCA_0956 TPCCA_0957 PF03480 Bacterial extracellular solute-binding protein, family 7 TPCCA_0958 PF04290 TPCCA_0958 TPCCA_0958 PF06808 TPCCA_0958 TPCCA_0959 PF10135 TPCCA_0959 TPCCA_0960 PF00460 Flagella basal body rod protein TPCCA_0960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_0961 PF00460 Flagella basal body rod protein TPCCA_0961 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_0962 PF02687 TPCCA_0962 TPCCA_0962 PF12704 MacB-like periplasmic core domain TPCCA_0963 PF02687 TPCCA_0963 TPCCA_0963 PF12704 MacB-like periplasmic core domain TPCCA_0964 PF00005 ABC transporter TPCCA_0965 PF16576 TPCCA_0965 TPCCA_0971 PF10634 Fe2+ transport protein TPCCA_0972 PF03239 TPCCA_0972 TPCCA_0973 PF01409 tRNA synthetases class II core domain (F) TPCCA_0975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPCCA_0977 PF01784 NIF3 (NGG1p interacting factor 3) TPCCA_0978 PF01252 TPCCA_0978 TPCCA_0979 PF01026 TatD related DNase TPCCA_0980 PF01207 Dihydrouridine synthase (Dus) TPCCA_0981 PF00990 GGDEF domain TPCCA_0982 PF01694 Rhomboid family TPCCA_0984 PF00183 Hsp90 protein TPCCA_0984 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPCCA_0985 PF00152 tRNA synthetases class II (D, K and N) TPCCA_0985 PF01336 OB-fold nucleic acid binding domain TPCCA_0985 PF02938 GAD domain TPCCA_0986 PF00892 EamA-like transporter family TPCCA_0988 PF01914 TPCCA_0988 TPCCA_0989 PF16561 TPCCA_0989 TPCCA_0990 PF13174 Tetratricopeptide repeat TPCCA_0990 PF13432 Tetratricopeptide repeat TPCCA_0991 PF00301 Rubredoxin TPCCA_0993 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel TPCCA_0993 PF05036 Sporulation related domain TPCCA_0994 PF01026 TatD related DNase TPCCA_0995 PF00027 Cyclic nucleotide-binding domain TPCCA_0995 PF13581 Histidine kinase-like ATPase domain TPCCA_0997 PF01343 Peptidase family S49 TPCCA_0998 PF01235 TPCCA_0998 TPCCA_0999 PF01580 FtsK/SpoIIIE family TPCCA_0999 PF09397 Ftsk gamma domain TPCCA_1002 PF10016 TPCCA_1002 TPCCA_1004 PF13662 Toprim domain TPCCA_1005 PF12169 DNA polymerase III subunits gamma and tau domain III TPCCA_1005 PF13177 DNA polymerase III, delta subunit TPCCA_1006 PF00204 DNA gyrase B TPCCA_1006 PF00986 DNA gyrase B subunit, carboxyl terminus TPCCA_1006 PF01751 Toprim domain TPCCA_1006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPCCA_1007 PF02511 Thymidylate synthase complementing protein TPCCA_1008 PF00317 Ribonucleotide reductase, all-alpha domain TPCCA_1008 PF02867 Ribonucleotide reductase, barrel domain TPCCA_1008 PF03477 ATP cone domain TPCCA_1009 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TPCCA_1009 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TPCCA_1010 PF00334 Nucleoside diphosphate kinase TPCCA_1011 PF01195 Peptidyl-tRNA hydrolase TPCCA_1012 PF04542 Sigma-70 region 2 TPCCA_1012 PF04545 Sigma-70, region 4 TPCCA_1013 PF00166 Chaperonin 10 Kd subunit TPCCA_1015 PF01029 NusB family TPCCA_1016 PF13145 PPIC-type PPIASE domain TPCCA_1016 PF13624 SurA N-terminal domain TPCCA_1017 PF01411 tRNA synthetases class II (A) TPCCA_1017 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPCCA_1018 PF00013 KH domain TPCCA_1018 PF01966 HD domain TPCCA_1018 PF12072 TPCCA_1018 TPCCA_1020 PF01425 Amidase TPCCA_1021 PF02637 GatB domain TPCCA_1021 PF02934 GatB/GatE catalytic domain TPCCA_1022 PF06745 KaiC TPCCA_1022 PF13541 Subunit ChlI of Mg-chelatase TPCCA_1023 PF02631 RecX family TPCCA_1024 PF00380 Ribosomal protein S9/S16 TPCCA_1025 PF00572 Ribosomal protein L13 TPCCA_1026 PF01432 Peptidase family M3 TPCCA_1027 PF01048 Phosphorylase superfamily TPCCA_1028 PF00580 UvrD/REP helicase N-terminal domain TPCCA_1028 PF13361 UvrD-like helicase C-terminal domain TPCCA_1029 PF03880 DbpA RNA binding domain TPCCA_1031 PF02707 TPCCA_1031 TPCCA_1031 PF02722 TPCCA_1031 TPCCA_1032 PF07009 Protein of unknown function (DUF1312) TPCCA_1033 PF01734 Patatin-like phospholipase TPCCA_1034 PF01699 Sodium/calcium exchanger protein TPCCA_1035 PF00133 tRNA synthetases class I (I, L, M and V) TPCCA_1035 PF08264 Anticodon-binding domain of tRNA TPCCA_1035 PF10458 Valyl tRNA synthetase tRNA binding arm TPCCA_1036 PF00122 E1-E2 ATPase TPCCA_1036 PF00403 Heavy-metal-associated domain TPCCA_1036 PF00702 haloacid dehalogenase-like hydrolase TPCCA_1037 PF03006 TPCCA_1037 TPCCA_1038 PF00210 Ferritin-like domain TPCCA_1039 PF00156 Phosphoribosyl transferase domain TPCCA_1040 PF00152 tRNA synthetases class II (D, K and N) TPCCA_1041 PF00574 Clp protease