locus-tag class description IFE08_00005 PF16200 C-terminal region of band_7 IFE08_00005 PF01145 SPFH domain / Band 7 family IFE08_00010 PF01145 SPFH domain / Band 7 family IFE08_00015 PF01406 tRNA synthetases class I (C) catalytic domain IFE08_00015 PF09190 DALR domain IFE08_00030 PF01841 Transglutaminase-like superfamily IFE08_00035 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IFE08_00035 PF04055 Radical SAM superfamily IFE08_00040 PF10437 Bacterial lipoate protein ligase C-terminus IFE08_00040 PF03099 Biotin/lipoate A/B protein ligase family IFE08_00045 PF01588 Putative tRNA binding domain IFE08_00045 PF09334 tRNA synthetases class I (M) IFE08_00050 PF00464 Serine hydroxymethyltransferase IFE08_00055 PF01139 tRNA-splicing ligase RtcB IFE08_00060 PF13180 PDZ domain IFE08_00065 PF00749 tRNA synthetases class I (E and Q), catalytic domain IFE08_00070 PF00291 Pyridoxal-phosphate dependent enzyme IFE08_00075 PF00375 Sodium:dicarboxylate symporter family IFE08_00085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IFE08_00085 PF00128 Alpha amylase, catalytic domain IFE08_00100 PF00708 Acylphosphatase IFE08_00105 PF01235 Sodium:alanine symporter family IFE08_00110 PF01207 Dihydrouridine synthase (Dus) IFE08_00115 PF01725 Ham1 family IFE08_00130 PF03960 ArsC family IFE08_00135 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IFE08_00135 PF00326 Prolyl oligopeptidase family IFE08_00140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IFE08_00140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IFE08_00155 PF01740 STAS domain IFE08_00160 PF02557 D-alanyl-D-alanine carboxypeptidase IFE08_00180 PF01915 Glycosyl hydrolase family 3 C-terminal domain IFE08_00180 PF00933 Glycosyl hydrolase family 3 N terminal domain IFE08_00200 PF03129 Anticodon binding domain IFE08_00200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IFE08_00205 PF01204 Trehalase IFE08_00215 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IFE08_00215 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain IFE08_00215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IFE08_00225 PF01979 Amidohydrolase family IFE08_00235 PF00326 Prolyl oligopeptidase family IFE08_00235 PF07676 WD40-like Beta Propeller Repeat IFE08_00260 PF02151 UvrB/uvrC motif IFE08_00260 PF00271 Helicase conserved C-terminal domain IFE08_00260 PF04851 Type III restriction enzyme, res subunit IFE08_00260 PF12344 Ultra-violet resistance protein B IFE08_00260 PF17757 UvrB interaction domain IFE08_00285 PF00571 CBS domain IFE08_00285 PF01769 Divalent cation transporter IFE08_00285 PF03448 MgtE intracellular N domain IFE08_00290 PF00005 ABC transporter IFE08_00290 PF00664 ABC transporter transmembrane region IFE08_00295 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family IFE08_00315 PF00883 Cytosol aminopeptidase family, catalytic domain IFE08_00315 PF02789 Cytosol aminopeptidase family, N-terminal domain IFE08_00335 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_00340 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_00340 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_00345 PF00005 ABC transporter IFE08_00345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_00350 PF00005 ABC transporter IFE08_00350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_00355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_00375 PF17239 Family of unknown function (DUF5312) IFE08_00395 PF01180 Dihydroorotate dehydrogenase IFE08_00400 PF02875 Mur ligase family, glutamate ligase domain IFE08_00400 PF01225 Mur ligase family, catalytic domain IFE08_00400 PF08245 Mur ligase middle domain IFE08_00410 PF03773 Predicted permease IFE08_00415 PF05598 Transposase domain (DUF772) IFE08_00415 PF01609 Transposase DDE domain IFE08_00425 PF05598 Transposase domain (DUF772) IFE08_00425 PF01609 Transposase DDE domain IFE08_00435 PF14579 Helix-hairpin-helix motif IFE08_00435 PF02811 PHP domain IFE08_00435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IFE08_00435 PF07733 Bacterial DNA polymerase III alpha NTPase domain IFE08_00450 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFE08_00450 PF04324 BFD-like [2Fe-2S] binding domain IFE08_00470 PF00005 ABC transporter IFE08_00485 PF01609 Transposase DDE domain IFE08_00485 PF05598 Transposase domain (DUF772) IFE08_00500 PF05598 Transposase domain (DUF772) IFE08_00500 PF01609 Transposase DDE domain IFE08_00505 PF00391 PEP-utilising enzyme, mobile domain IFE08_00505 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IFE08_00525 PF01171 PP-loop family IFE08_00530 PF01925 Sulfite exporter TauE/SafE IFE08_00540 PF02082 Transcriptional regulator IFE08_00545 PF13460 NAD(P)H-binding IFE08_00550 PF03102 NeuB family IFE08_00550 PF08666 SAF domain IFE08_00565 PF00817 impB/mucB/samB family IFE08_00565 PF11798 IMS family HHH motif IFE08_00565 PF11799 impB/mucB/samB family C-terminal domain IFE08_00585 PF00005 ABC transporter IFE08_00605 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IFE08_00605 PF00037 4Fe-4S binding domain IFE08_00605 PF02256 Iron hydrogenase small subunit IFE08_00605 PF02906 Iron only hydrogenase large subunit, C-terminal domain IFE08_00620 PF00005 ABC transporter IFE08_00625 PF00210 Ferritin-like domain IFE08_00630 PF00672 HAMP domain IFE08_00630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_00630 PF02743 Cache domain IFE08_00640 PF01206 Sulfurtransferase TusA IFE08_00665 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_00670 PF00005 ABC transporter IFE08_00680 PF00005 ABC transporter IFE08_00685 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component IFE08_00700 PF05598 Transposase domain (DUF772) IFE08_00700 PF01609 Transposase DDE domain IFE08_00710 PF00436 Single-strand binding protein family IFE08_00715 PF00731 AIR carboxylase IFE08_00720 PF03600 Citrate transporter IFE08_00725 PF08011 PD-(D/E)XK nuclease superfamily IFE08_00725 PF09820 Predicted AAA-ATPase IFE08_00735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_00740 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_00745 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_00745 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_00750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_00750 PF00005 ABC transporter IFE08_00755 PF00005 ABC transporter IFE08_00755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_00760 PF00005 ABC transporter IFE08_00760 PF00664 ABC transporter transmembrane region IFE08_00765 PF00664 ABC transporter transmembrane region IFE08_00765 PF00005 ABC transporter IFE08_00785 PF09820 Predicted AAA-ATPase IFE08_00785 PF08011 PD-(D/E)XK nuclease superfamily IFE08_00790 PF00013 KH domain IFE08_00790 PF03725 3' exoribonuclease family, domain 2 IFE08_00790 PF00575 S1 RNA binding domain IFE08_00790 PF01138 3' exoribonuclease family, domain 1 IFE08_00790 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IFE08_00795 PF00312 Ribosomal protein S15 IFE08_00800 PF01687 Riboflavin kinase IFE08_00800 PF06574 FAD synthetase IFE08_00805 PF00672 HAMP domain IFE08_00805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_00805 PF02743 Cache domain IFE08_00830 PF00899 ThiF family IFE08_00835 PF00953 Glycosyl transferase family 4 IFE08_00845 PF00860 Permease family IFE08_00855 PF01569 PAP2 superfamily IFE08_00860 PF12631 MnmE helical domain IFE08_00860 PF01926 50S ribosome-binding GTPase IFE08_00860 PF10396 GTP-binding protein TrmE N-terminus IFE08_00870 PF10502 Signal peptidase, peptidase S26 IFE08_00885 PF00919 Uncharacterized protein family UPF0004 IFE08_00885 PF04055 Radical SAM superfamily IFE08_00885 PF18693 TRAM domain IFE08_00910 PF01609 Transposase DDE domain IFE08_00910 PF05598 Transposase domain (DUF772) IFE08_00915 PF00211 Adenylate and Guanylate cyclase catalytic domain IFE08_00915 PF00672 HAMP domain IFE08_00920 PF00211 Adenylate and Guanylate cyclase catalytic domain IFE08_00925 PF13419 Haloacid dehalogenase-like hydrolase IFE08_00930 PF00501 AMP-binding enzyme IFE08_00930 PF13193 AMP-binding enzyme C-terminal domain IFE08_00935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_00945 PF01661 Macro domain IFE08_00955 PF11867 Domain of unknown function (DUF3387) IFE08_00955 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IFE08_00955 PF18766 SWI2/SNF2 ATPase IFE08_00975 PF00270 DEAD/DEAH box helicase IFE08_00975 PF17191 RecG wedge domain IFE08_00975 PF13749 Putative ATP-dependent DNA helicase recG C-terminal IFE08_00980 PF12161 HsdM N-terminal domain IFE08_00980 PF02384 N-6 DNA Methylase IFE08_01000 PF00005 ABC transporter IFE08_01055 PF13411 MerR HTH family regulatory protein IFE08_01080 PF02082 Transcriptional regulator IFE08_01090 PF13460 NAD(P)H-binding IFE08_01130 PF03069 Acetamidase/Formamidase family IFE08_01195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFE08_01195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFE08_01200 PF01136 Peptidase family U32 IFE08_01200 PF12392 Collagenase IFE08_01205 PF02540 NAD synthase IFE08_01210 PF00664 ABC transporter transmembrane region IFE08_01210 PF00005 ABC transporter IFE08_01220 PF00664 ABC transporter transmembrane region IFE08_01220 PF00005 ABC transporter IFE08_01220 PF03412 Peptidase C39 family IFE08_01225 PF00005 ABC transporter IFE08_01225 PF00664 ABC transporter transmembrane region IFE08_01240 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IFE08_01240 PF12557 Cob(I)alamin adenosyltransferase N terminal IFE08_01245 PF02195 ParB-like nuclease domain IFE08_01245 PF17762 HTH domain found in ParB protein IFE08_01250 PF13614 AAA domain IFE08_01260 PF05598 Transposase domain (DUF772) IFE08_01260 PF01609 Transposase DDE domain IFE08_01265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_01265 PF00672 HAMP domain IFE08_01265 PF02743 Cache domain IFE08_01280 PF07729 FCD domain IFE08_01280 PF00392 Bacterial regulatory proteins, gntR family IFE08_01285 PF03390 2-hydroxycarboxylate transporter family IFE08_01290 PF00682 HMGL-like IFE08_01290 PF00364 Biotin-requiring enzyme IFE08_01290 PF02436 Conserved carboxylase domain IFE08_01300 PF00364 Biotin-requiring enzyme IFE08_01305 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit IFE08_01310 PF06857 Malonate decarboxylase delta subunit (MdcD) IFE08_01315 PF03328 HpcH/HpaI aldolase/citrate lyase family IFE08_01320 PF04223 Citrate lyase, alpha subunit (CitF) IFE08_01335 PF01343 Peptidase family S49 IFE08_01340 PF01926 50S ribosome-binding GTPase IFE08_01340 PF06071 Protein of unknown function (DUF933) IFE08_01345 PF08245 Mur ligase middle domain IFE08_01345 PF02875 Mur ligase family, glutamate ligase domain IFE08_01350 PF02608 ABC transporter substrate-binding protein PnrA-like IFE08_01355 PF00005 ABC transporter IFE08_01360 PF02653 Branched-chain amino acid transport system / permease component IFE08_01365 PF02653 Branched-chain amino acid transport system / permease component IFE08_01370 PF13941 MutL protein IFE08_01375 PF02310 B12 binding domain IFE08_01385 PF00005 ABC transporter IFE08_01390 PF00005 ABC transporter IFE08_01395 PF01266 FAD dependent oxidoreductase IFE08_01420 PF01515 Phosphate acetyl/butaryl transferase IFE08_01425 PF13176 Tetratricopeptide repeat IFE08_01425 PF13174 Tetratricopeptide repeat IFE08_01430 PF08439 Oligopeptidase F IFE08_01430 PF01432 Peptidase family M3 IFE08_01435 PF10431 C-terminal, D2-small domain, of ClpB protein IFE08_01435 PF17871 AAA lid domain IFE08_01435 PF07724 AAA domain (Cdc48 subfamily) IFE08_01435 PF00004 ATPase family associated with various cellular activities (AAA) IFE08_01435 PF02861 Clp amino terminal domain, pathogenicity island component IFE08_01450 PF01416 tRNA pseudouridine synthase IFE08_01455 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) IFE08_01460 PF01680 SOR/SNZ family IFE08_01470 PF01066 CDP-alcohol phosphatidyltransferase IFE08_01480 PF00672 HAMP domain IFE08_01480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_01480 PF02743 Cache domain IFE08_01490 PF07724 AAA domain (Cdc48 subfamily) IFE08_01490 PF10431 C-terminal, D2-small domain, of ClpB protein IFE08_01490 PF06689 ClpX C4-type zinc finger IFE08_01495 PF00574 Clp protease IFE08_01500 PF05698 Bacterial trigger factor protein (TF) C-terminus IFE08_01500 PF05697 Bacterial trigger factor protein (TF) IFE08_01500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IFE08_01515 PF00155 Aminotransferase class I and II IFE08_01530 PF00072 Response regulator receiver domain IFE08_01540 PF01584 CheW-like domain IFE08_01545 PF01627 Hpt domain IFE08_01545 PF01584 CheW-like domain IFE08_01545 PF07194 P2 response regulator binding domain IFE08_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFE08_01545 PF02895 Signal transducing histidine kinase, homodimeric domain IFE08_01560 PF00814 Glycoprotease family IFE08_01575 PF01106 NifU-like domain IFE08_01575 PF01521 Iron-sulphur cluster biosynthesis IFE08_01580 PF00692 dUTPase IFE08_01585 PF16258 Domain of unknown function (DUF4912) IFE08_01595 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFE08_01595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IFE08_01600 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B IFE08_01600 PF00970 Oxidoreductase FAD-binding domain IFE08_01600 PF00175 Oxidoreductase NAD-binding domain IFE08_01620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IFE08_01630 PF00111 2Fe-2S iron-sulfur cluster binding domain IFE08_01630 PF01799 [2Fe-2S] binding domain IFE08_01635 PF03450 CO dehydrogenase flavoprotein C-terminal domain IFE08_01635 PF00941 FAD binding domain in molybdopterin dehydrogenase IFE08_01645 PF00154 recA bacterial DNA recombination protein IFE08_01650 PF01313 Bacterial export proteins, family 3 IFE08_01655 PF01311 Bacterial export proteins, family 1 IFE08_01660 PF01312 FlhB HrpN YscU SpaS Family IFE08_01665 PF00771 FHIPEP family IFE08_01680 PF00403 Heavy-metal-associated domain IFE08_01690 PF00158 Sigma-54 interaction domain IFE08_01690 PF00072 Response regulator receiver domain IFE08_01690 PF02954 Bacterial regulatory protein, Fis family IFE08_01710 PF00834 Ribulose-phosphate 3 epimerase family IFE08_01730 PF04225 Opacity-associated protein A LysM-like domain IFE08_01730 PF01551 Peptidase family M23 IFE08_01735 PF01966 HD domain IFE08_01735 PF00013 KH domain IFE08_01735 PF12072 Domain of unknown function (DUF3552) IFE08_01760 PF00521 DNA gyrase/topoisomerase IV, subunit A IFE08_01765 PF01497 Periplasmic binding protein IFE08_01770 PF01032 FecCD transport family IFE08_01775 PF00005 ABC transporter IFE08_01800 PF00672 HAMP domain IFE08_01800 PF02743 Cache domain IFE08_01800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_01805 PF01661 Macro domain IFE08_01810 PF01814 Hemerythrin HHE cation binding domain IFE08_01850 PF00005 ABC transporter IFE08_01860 PF00005 ABC transporter IFE08_01865 PF02571 Precorrin-6x reductase CbiJ/CobK IFE08_01870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IFE08_01870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFE08_01875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_01875 PF00672 HAMP domain IFE08_01875 PF12729 Four helix bundle sensory module for signal transduction IFE08_01880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IFE08_01880 PF07685 CobB/CobQ-like glutamine amidotransferase domain IFE08_01885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFE08_01890 PF06180 Cobalt chelatase (CbiK) IFE08_01900 PF05785 Rho-activating domain of cytotoxic necrotizing factor IFE08_01900 PF18807 Tripartite Tc toxins repeat IFE08_01980 PF01609 Transposase DDE domain IFE08_01980 PF05598 Transposase domain (DUF772) IFE08_02000 PF02743 Cache domain IFE08_02000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_02000 PF00672 HAMP domain IFE08_02005 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IFE08_02005 PF10531 SLBB domain IFE08_02005 PF13375 RnfC Barrel sandwich hybrid domain IFE08_02005 PF13237 4Fe-4S dicluster domain IFE08_02010 PF03116 NQR2, RnfD, RnfE family IFE08_02015 PF04205 FMN-binding domain IFE08_02020 PF02508 Rnf-Nqr subunit, membrane protein IFE08_02025 PF02508 Rnf-Nqr subunit, membrane protein IFE08_02030 PF05034 Methylaspartate ammonia-lyase N-terminus IFE08_02030 PF07476 Methylaspartate ammonia-lyase C-terminus IFE08_02045 PF02021 Uncharacterised protein family UPF0102 IFE08_02050 PF00072 Response regulator receiver domain IFE08_02055 PF01312 FlhB HrpN YscU SpaS Family IFE08_02065 PF04452 RNA methyltransferase IFE08_02075 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IFE08_02075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IFE08_02080 PF00849 RNA pseudouridylate synthase IFE08_02085 PF02527 rRNA small subunit methyltransferase G IFE08_02090 PF00171 Aldehyde dehydrogenase family IFE08_02095 PF05598 Transposase domain (DUF772) IFE08_02095 PF01609 Transposase DDE domain IFE08_02100 PF00171 Aldehyde dehydrogenase family IFE08_02105 PF03553 Na+/H+ antiporter family IFE08_02110 PF00005 ABC transporter IFE08_02110 PF16326 ABC transporter C-terminal domain IFE08_02110 PF12848 ABC transporter IFE08_02115 PF00005 ABC transporter IFE08_02115 PF00664 ABC transporter transmembrane region IFE08_02120 PF06368 Methylaspartate mutase E chain (MutE) IFE08_02125 PF00266 Aminotransferase class-V IFE08_02140 PF03880 DbpA RNA binding domain IFE08_02145 PF00211 Adenylate and Guanylate cyclase catalytic domain IFE08_02150 PF01554 MatE IFE08_02155 PF00149 Calcineurin-like phosphoesterase IFE08_02160 PF13476 AAA domain IFE08_02190 PF14353 CpXC protein IFE08_02195 PF00849 RNA pseudouridylate synthase IFE08_02195 PF01479 S4 domain IFE08_02215 PF00561 alpha/beta hydrolase fold IFE08_02240 PF01425 Amidase IFE08_02260 PF13545 Crp-like helix-turn-helix domain IFE08_02260 PF00027 Cyclic nucleotide-binding domain IFE08_02275 PF01613 Flavin reductase like domain IFE08_02275 PF00753 Metallo-beta-lactamase superfamily IFE08_02285 PF01609 Transposase DDE domain IFE08_02285 PF05598 Transposase domain (DUF772) IFE08_02300 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFE08_02305 PF00085 Thioredoxin IFE08_02315 PF03006 Haemolysin-III related IFE08_02330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IFE08_02370 PF01494 FAD binding domain IFE08_02375 PF01209 ubiE/COQ5 methyltransferase family IFE08_02385 PF00348 Polyprenyl synthetase IFE08_02390 PF02589 LUD domain IFE08_02390 PF11870 Domain of unknown function (DUF3390) IFE08_02390 PF13183 4Fe-4S dicluster domain IFE08_02400 PF00005 ABC transporter IFE08_02405 PF02374 Anion-transporting ATPase IFE08_02405 PF17886 HSP20-like domain found in ArsA IFE08_02410 PF17886 HSP20-like domain found in ArsA IFE08_02410 PF02374 Anion-transporting ATPase IFE08_02415 PF02652 L-lactate permease IFE08_02420 PF01012 Electron transfer flavoprotein domain IFE08_02425 PF00766 Electron transfer flavoprotein FAD-binding domain IFE08_02425 PF01012 Electron transfer flavoprotein domain IFE08_02435 PF08011 PD-(D/E)XK nuclease superfamily IFE08_02435 PF09820 Predicted AAA-ATPase IFE08_02660 PF00300 Histidine phosphatase superfamily (branch 1) IFE08_02665 PF05598 Transposase domain (DUF772) IFE08_02665 PF01609 Transposase DDE domain IFE08_02675 PF04055 Radical SAM superfamily IFE08_02675 PF06463 Molybdenum Cofactor Synthesis C IFE08_02695 PF12728 Helix-turn-helix domain IFE08_02695 PF02661 Fic/DOC family IFE08_02795 PF01048 Phosphorylase superfamily IFE08_02900 PF00561 alpha/beta hydrolase fold IFE08_02925 PF00005 ABC transporter IFE08_02925 PF00664 ABC transporter transmembrane region IFE08_02970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_02970 PF02743 Cache domain IFE08_02970 PF00672 HAMP domain IFE08_02990 PF08011 PD-(D/E)XK nuclease superfamily IFE08_02990 PF09820 Predicted AAA-ATPase IFE08_02995 PF02311 AraC-like ligand binding domain IFE08_02995 PF12833 Helix-turn-helix domain IFE08_03000 PF00005 ABC transporter IFE08_03000 PF00664 ABC transporter transmembrane region IFE08_03005 PF00664 ABC transporter transmembrane region IFE08_03005 PF00005 ABC transporter IFE08_03050 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IFE08_03050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IFE08_03060 PF02601 Exonuclease VII, large subunit IFE08_03060 PF13742 OB-fold nucleic acid binding domain IFE08_03070 PF00005 ABC transporter IFE08_03075 PF03390 2-hydroxycarboxylate transporter family IFE08_03080 PF13407 Periplasmic binding protein domain IFE08_03080 PF18610 Periplasmic binding protein domain IFE08_03090 PF13439 Glycosyltransferase Family 4 IFE08_03090 PF00534 Glycosyl transferases group 1 IFE08_03095 PF00005 ABC transporter IFE08_03095 PF08402 TOBE domain IFE08_03100 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_03105 PF03952 Enolase, N-terminal domain IFE08_03105 PF00113 Enolase, C-terminal TIM barrel domain IFE08_03115 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_03120 PF00005 ABC transporter IFE08_03160 PF02254 TrkA-N domain IFE08_03160 PF02080 TrkA-C domain IFE08_03165 PF00521 DNA gyrase/topoisomerase IV, subunit A IFE08_03165 PF03989 DNA gyrase C-terminal domain, beta-propeller IFE08_03170 PF00117 Glutamine amidotransferase class-I IFE08_03170 PF06418 CTP synthase N-terminus IFE08_03180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IFE08_03180 PF02896 PEP-utilising enzyme, TIM barrel domain IFE08_03180 PF00391 PEP-utilising enzyme, mobile domain IFE08_03185 PF00596 Class II Aldolase and Adducin N-terminal domain IFE08_03190 PF00072 Response regulator receiver domain IFE08_03195 PF02631 RecX family IFE08_03200 PF00380 Ribosomal protein S9/S16 IFE08_03205 PF00572 Ribosomal protein L13 IFE08_03215 PF00754 F5/8 type C domain IFE08_03215 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase IFE08_03215 PF13088 BNR repeat-like domain IFE08_03220 PF02743 Cache domain IFE08_03220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_03220 PF00672 HAMP domain IFE08_03230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IFE08_03240 PF16811 TRAP transporter T-component IFE08_03260 PF01547 Bacterial extracellular solute-binding protein IFE08_03265 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_03270 PF08402 TOBE domain IFE08_03270 PF00005 ABC transporter IFE08_03285 PF01522 Polysaccharide deacetylase IFE08_03295 PF00005 ABC transporter IFE08_03300 PF02632 BioY family IFE08_03315 PF00478 IMP dehydrogenase / GMP reductase domain IFE08_03315 PF00571 CBS domain IFE08_03330 PF01470 Pyroglutamyl peptidase IFE08_03340 PF13419 Haloacid dehalogenase-like hydrolase IFE08_03350 PF03781 Sulfatase-modifying factor enzyme 1 IFE08_03360 PF00196 Bacterial regulatory proteins, luxR family IFE08_03360 PF00072 Response regulator receiver domain IFE08_03365 PF02080 TrkA-C domain IFE08_03365 PF02254 TrkA-N domain IFE08_03370 PF02386 Cation transport protein IFE08_03400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IFE08_03400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IFE08_03415 PF02978 Signal peptide binding domain IFE08_03415 PF02881 SRP54-type protein, helical bundle domain IFE08_03415 PF00448 SRP54-type protein, GTPase domain IFE08_03425 PF00465 Iron-containing alcohol dehydrogenase IFE08_03435 PF02223 Thymidylate kinase IFE08_03445 PF08546 Ketopantoate reductase PanE/ApbA C terminal IFE08_03445 PF02558 Ketopantoate reductase PanE/ApbA IFE08_03460 PF07244 Surface antigen variable number repeat IFE08_03460 PF01103 Surface antigen IFE08_03470 PF00488 MutS domain V IFE08_03470 PF05190 MutS family domain IV IFE08_03470 PF05188 MutS domain II IFE08_03470 PF01624 MutS domain I IFE08_03470 PF05192 MutS domain III IFE08_03480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IFE08_03485 PF02504 Fatty acid synthesis protein IFE08_03510 PF13847 Methyltransferase domain IFE08_03525 PF03687 Uncharacterised protein family (UPF0164) IFE08_03540 PF00005 ABC transporter IFE08_03560 PF00005 ABC transporter IFE08_03560 PF00664 ABC transporter transmembrane region IFE08_03565 PF00005 ABC transporter IFE08_03565 PF00664 ABC transporter transmembrane region IFE08_03575 PF01979 Amidohydrolase family IFE08_03580 PF07075 Protein of unknown function (DUF1343) IFE08_03585 PF00144 Beta-lactamase IFE08_03635 PF00005 ABC transporter IFE08_03655 PF07670 Nucleoside recognition IFE08_03655 PF02421 Ferrous iron transport protein B IFE08_03655 PF17910 FeoB cytosolic helical domain IFE08_03655 PF07664 Ferrous iron transport protein B C terminus IFE08_03655 PF04023 FeoA domain IFE08_03690 PF00270 DEAD/DEAH box helicase IFE08_03690 PF00570 HRDC domain IFE08_03690 PF16124 RecQ zinc-binding IFE08_03690 PF09382 RQC domain IFE08_03690 PF00271 Helicase conserved C-terminal domain IFE08_03720 PF02872 5'-nucleotidase, C-terminal domain IFE08_03720 PF00149 Calcineurin-like phosphoesterase IFE08_03735 PF01168 Alanine racemase, N-terminal domain IFE08_03745 PF01330 RuvA N terminal domain IFE08_03750 PF02075 Crossover junction endodeoxyribonuclease RuvC IFE08_03760 PF08367 Peptidase M16C associated IFE08_03760 PF00675 Insulinase (Peptidase family M16) IFE08_03760 PF05193 Peptidase M16 inactive domain IFE08_03765 PF01171 PP-loop family IFE08_03765 PF00117 Glutamine amidotransferase class-I IFE08_03765 PF00958 GMP synthase C terminal domain IFE08_03800 PF14659 Phage integrase, N-terminal SAM-like domain IFE08_03800 PF00589 Phage integrase family IFE08_03825 PF03432 Relaxase/Mobilisation nuclease domain IFE08_03845 PF02603 HPr Serine kinase N terminus IFE08_03845 PF07475 HPr Serine kinase C-terminal domain IFE08_03850 PF00381 PTS HPr component phosphorylation site IFE08_03865 PF02687 FtsX-like permease family IFE08_03865 PF00005 ABC transporter IFE08_03865 PF12704 MacB-like periplasmic core domain IFE08_03870 PF00005 ABC transporter IFE08_03870 PF12704 MacB-like periplasmic core domain IFE08_03870 PF02687 FtsX-like permease family IFE08_03875 PF00152 tRNA synthetases class II (D, K and N) IFE08_03880 PF00403 Heavy-metal-associated domain IFE08_03890 PF08264 Anticodon-binding domain of tRNA IFE08_03890 PF00133 tRNA synthetases class I (I, L, M and V) IFE08_03890 PF10458 Valyl tRNA synthetase tRNA binding arm IFE08_03895 PF00664 ABC transporter transmembrane region IFE08_03895 PF00005 ABC transporter IFE08_03905 PF01042 Endoribonuclease L-PSP IFE08_03910 PF08032 RNA 2'-O ribose methyltransferase substrate binding IFE08_03910 PF00588 SpoU rRNA Methylase family IFE08_03920 PF00829 Ribosomal prokaryotic L21 protein IFE08_03930 PF01016 Ribosomal L27 protein IFE08_03935 PF01018 GTP1/OBG IFE08_03935 PF01926 50S ribosome-binding GTPase IFE08_03940 PF01467 Cytidylyltransferase-like IFE08_03950 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component IFE08_03960 PF01869 BadF/BadG/BcrA/BcrD ATPase family IFE08_03965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_03965 PF00672 HAMP domain IFE08_03965 PF02743 Cache domain IFE08_04005 PF00471 Ribosomal protein L33 IFE08_04015 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IFE08_04020 PF02357 Transcription termination factor nusG IFE08_04020 PF00467 KOW motif IFE08_04025 PF03946 Ribosomal protein L11, N-terminal domain IFE08_04025 PF00298 Ribosomal protein L11, RNA binding domain IFE08_04030 PF00687 Ribosomal protein L1p/L10e family IFE08_04035 PF00466 Ribosomal protein L10 IFE08_04040 PF16320 Ribosomal protein L7/L12 dimerisation domain IFE08_04040 PF00542 Ribosomal protein L7/L12 C-terminal domain IFE08_04045 PF04563 RNA polymerase beta subunit IFE08_04045 PF04561 RNA polymerase Rpb2, domain 2 IFE08_04045 PF04565 RNA polymerase Rpb2, domain 3 IFE08_04045 PF10385 RNA polymerase beta subunit external 1 domain IFE08_04045 PF00562 RNA polymerase Rpb2, domain 6 IFE08_04045 PF04560 RNA polymerase Rpb2, domain 7 IFE08_04050 PF00623 RNA polymerase Rpb1, domain 2 IFE08_04050 PF04983 RNA polymerase Rpb1, domain 3 IFE08_04050 PF05000 RNA polymerase Rpb1, domain 4 IFE08_04050 PF04998 RNA polymerase Rpb1, domain 5 IFE08_04050 PF04997 RNA polymerase Rpb1, domain 1 IFE08_04060 PF01541 GIY-YIG catalytic domain IFE08_04060 PF02151 UvrB/uvrC motif IFE08_04060 PF08459 UvrC Helix-hairpin-helix N-terminal IFE08_04075 PF02073 Thermophilic metalloprotease (M29) IFE08_04080 PF00266 Aminotransferase class-V IFE08_04100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IFE08_04100 PF03129 Anticodon binding domain IFE08_04100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IFE08_04105 PF07730 Histidine kinase IFE08_04110 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IFE08_04110 PF00271 Helicase conserved C-terminal domain IFE08_04110 PF04408 Helicase associated domain (HA2) IFE08_04110 PF00270 DEAD/DEAH box helicase IFE08_04120 PF01268 Formate--tetrahydrofolate ligase IFE08_04125 PF00756 Putative esterase IFE08_04125 PF01476 LysM domain IFE08_04130 PF05343 M42 glutamyl aminopeptidase IFE08_04145 PF05598 Transposase domain (DUF772) IFE08_04145 PF01609 Transposase DDE domain IFE08_04155 PF00501 AMP-binding enzyme IFE08_04165 PF00440 Bacterial regulatory proteins, tetR family IFE08_04165 PF17932 Tetracyclin repressor-like, C-terminal domain IFE08_04170 PF03616 Sodium/glutamate symporter IFE08_04175 PF00005 ABC transporter IFE08_04175 PF00664 ABC transporter transmembrane region IFE08_04190 PF00005 ABC transporter IFE08_04195 PF08021 Siderophore-interacting FAD-binding domain IFE08_04195 PF00664 ABC transporter transmembrane region IFE08_04195 PF04954 Siderophore-interacting protein IFE08_04195 PF00005 ABC transporter IFE08_04210 PF03484 tRNA synthetase B5 domain IFE08_04210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IFE08_04215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IFE08_04215 PF02874 ATP synthase alpha/beta family, beta-barrel domain IFE08_04220 PF01813 ATP synthase subunit D IFE08_04235 PF13277 YmdB-like protein IFE08_04245 PF12804 MobA-like NTP transferase domain IFE08_04250 PF02028 BCCT, betaine/carnitine/choline family transporter IFE08_04260 PF09338 Glycine/sarcosine/betaine reductase component B subunits IFE08_04265 PF02028 BCCT, betaine/carnitine/choline family transporter IFE08_04270 PF01032 FecCD transport family IFE08_04280 PF00300 Histidine phosphatase superfamily (branch 1) IFE08_04295 PF01880 Desulfoferrodoxin IFE08_04305 PF01554 MatE IFE08_04330 PF00263 Bacterial type II and III secretion system protein IFE08_04330 PF03958 Bacterial type II/III secretion system short domain IFE08_04340 PF18807 Tripartite Tc toxins repeat IFE08_04340 PF05785 Rho-activating domain of cytotoxic necrotizing factor IFE08_04450 PF05785 Rho-activating domain of cytotoxic necrotizing factor IFE08_04450 PF18807 Tripartite Tc toxins repeat IFE08_04485 PF01609 Transposase DDE domain IFE08_04485 PF05598 Transposase domain (DUF772) IFE08_04525 PF00005 ABC transporter IFE08_04530 PF00005 ABC transporter IFE08_04530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_04535 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_04535 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_04540 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_04545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_04550 PF12833 Helix-turn-helix domain IFE08_04550 PF02311 AraC-like ligand binding domain IFE08_04555 PF02743 Cache domain IFE08_04555 PF00672 HAMP domain IFE08_04555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_04600 PF10609 NUBPL iron-transfer P-loop NTPase IFE08_04610 PF01790 Prolipoprotein diacylglyceryl transferase IFE08_04615 PF02540 NAD synthase IFE08_04640 PF02390 Putative methyltransferase IFE08_04665 PF09338 Glycine/sarcosine/betaine reductase component B subunits IFE08_04670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_04670 PF00672 HAMP domain IFE08_04670 PF02743 Cache domain IFE08_04675 PF07724 AAA domain (Cdc48 subfamily) IFE08_04675 PF17871 AAA lid domain IFE08_04675 PF02861 Clp amino terminal domain, pathogenicity island component IFE08_04675 PF10431 C-terminal, D2-small domain, of ClpB protein IFE08_04675 PF00004 ATPase family associated with various cellular activities (AAA) IFE08_04680 PF02617 ATP-dependent Clp protease adaptor protein ClpS IFE08_04690 PF02677 Epoxyqueuosine reductase QueH IFE08_04700 PF00905 Penicillin binding protein transpeptidase domain IFE08_04700 PF03793 PASTA domain IFE08_04700 PF03717 Penicillin-binding Protein dimerisation domain IFE08_04720 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IFE08_04720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IFE08_04725 PF01479 S4 domain IFE08_04725 PF00163 Ribosomal protein S4/S9 N-terminal domain IFE08_04740 PF00166 Chaperonin 10 Kd subunit IFE08_04745 PF03979 Sigma-70 factor, region 1.1 IFE08_04745 PF04542 Sigma-70 region 2 IFE08_04745 PF00140 Sigma-70 factor, region 1.2 IFE08_04745 PF04539 Sigma-70 region 3 IFE08_04745 PF04545 Sigma-70, region 4 IFE08_04750 PF01171 PP-loop family IFE08_04760 PF13180 PDZ domain IFE08_04765 PF13026 Protein of unknown function (DUF3887) IFE08_04765 PF12146 Serine aminopeptidase, S33 IFE08_04770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IFE08_04770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IFE08_04785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IFE08_04790 PF13173 AAA domain IFE08_04790 PF13635 Domain of unknown function (DUF4143) IFE08_04795 PF00132 Bacterial transferase hexapeptide (six repeats) IFE08_04805 PF02719 Polysaccharide biosynthesis protein IFE08_04810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IFE08_04845 PF02350 UDP-N-acetylglucosamine 2-epimerase IFE08_04855 PF07478 D-ala D-ala ligase C-terminus IFE08_04855 PF01820 D-ala D-ala ligase N-terminus IFE08_04860 PF08666 SAF domain IFE08_04860 PF03102 NeuB family IFE08_04875 PF02348 Cytidylyltransferase IFE08_04885 PF00483 Nucleotidyl transferase IFE08_04900 PF00535 Glycosyl transferase family 2 IFE08_04925 PF02350 UDP-N-acetylglucosamine 2-epimerase IFE08_04930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IFE08_04930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IFE08_04930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IFE08_04945 PF00535 Glycosyl transferase family 2 IFE08_04950 PF00535 Glycosyl transferase family 2 IFE08_04985 PF16363 GDP-mannose 4,6 dehydratase IFE08_04995 PF03313 Serine dehydratase alpha chain IFE08_05000 PF03315 Serine dehydratase beta chain IFE08_05000 PF01842 ACT domain IFE08_05005 PF05525 Branched-chain amino acid transport protein IFE08_05020 PF04055 Radical SAM superfamily IFE08_05020 PF00919 Uncharacterized protein family UPF0004 IFE08_05060 PF03601 Conserved hypothetical protein 698 IFE08_05070 PF00005 ABC transporter IFE08_05085 PF00672 HAMP domain IFE08_05085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_05085 PF02743 Cache domain IFE08_05090 PF03537 Glycoside-hydrolase family GH114 IFE08_05095 PF02608 ABC transporter substrate-binding protein PnrA-like IFE08_05100 PF00005 ABC transporter IFE08_05105 PF02653 Branched-chain amino acid transport system / permease component IFE08_05110 PF02653 Branched-chain amino acid transport system / permease component IFE08_05125 PF00162 Phosphoglycerate kinase IFE08_05130 PF01520 N-acetylmuramoyl-L-alanine amidase IFE08_05140 PF04620 Flagellar filament outer layer protein Flaa IFE08_05150 PF01649 Ribosomal protein S20 IFE08_05155 PF00216 Bacterial DNA-binding protein IFE08_05160 PF00795 Carbon-nitrogen hydrolase IFE08_05170 PF02464 Competence-damaged protein IFE08_05170 PF18146 Damage-inducible protein CinA KH domain IFE08_05170 PF00994 Probable molybdopterin binding domain IFE08_05175 PF00892 EamA-like transporter family IFE08_05180 PF03313 Serine dehydratase alpha chain IFE08_05185 PF00672 HAMP domain IFE08_05185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_05185 PF02743 Cache domain IFE08_05190 PF12627 Probable RNA and SrmB- binding site of polymerase A IFE08_05190 PF01743 Poly A polymerase head domain IFE08_05190 PF13735 tRNA nucleotidyltransferase domain 2 putative IFE08_05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFE08_05200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IFE08_05210 PF00664 ABC transporter transmembrane region IFE08_05210 PF00005 ABC transporter IFE08_05215 PF00005 ABC transporter IFE08_05215 PF00664 ABC transporter transmembrane region IFE08_05240 PF01702 Queuine tRNA-ribosyltransferase IFE08_05245 PF12850 Calcineurin-like phosphoesterase superfamily domain IFE08_05260 PF01281 Ribosomal protein L9, N-terminal domain IFE08_05260 PF03948 Ribosomal protein L9, C-terminal domain IFE08_05265 PF01084 Ribosomal protein S18 IFE08_05270 PF00436 Single-strand binding protein family IFE08_05275 PF01250 Ribosomal protein S6 IFE08_05335 PF14220 Domain of unknown function (DUF4329) IFE08_05335 PF05593 RHS Repeat IFE08_05335 PF03527 RHS protein IFE08_05345 PF05488 PAAR motif IFE08_05345 PF05593 RHS Repeat IFE08_05380 PF14220 Domain of unknown function (DUF4329) IFE08_05380 PF03527 RHS protein IFE08_05380 PF05593 RHS Repeat IFE08_05385 PF00860 Permease family IFE08_05400 PF01888 CbiD IFE08_05405 PF02901 Pyruvate formate lyase-like IFE08_05405 PF01228 Glycine radical IFE08_05410 PF04055 Radical SAM superfamily IFE08_05415 PF00011 Hsp20/alpha crystallin family IFE08_05420 PF16314 Domain of unknown function (DUF4954) IFE08_05445 PF00664 ABC transporter transmembrane region IFE08_05445 PF00005 ABC transporter IFE08_05450 PF00664 ABC transporter transmembrane region IFE08_05450 PF00005 ABC transporter IFE08_05455 PF00005 ABC transporter IFE08_05460 PF01032 FecCD transport family IFE08_05465 PF01497 Periplasmic binding protein IFE08_05470 PF00672 HAMP domain IFE08_05470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_05470 PF17200 Single Cache domain 2 IFE08_05475 PF01339 CheB methylesterase IFE08_05475 PF00072 Response regulator receiver domain IFE08_05480 PF01739 CheR methyltransferase, SAM binding domain IFE08_05480 PF03705 CheR methyltransferase, all-alpha domain IFE08_05485 PF01609 Transposase DDE domain IFE08_05485 PF05598 Transposase domain (DUF772) IFE08_05500 PF00005 ABC transporter IFE08_05500 PF12399 Branched-chain amino acid ATP-binding cassette transporter IFE08_05505 PF04205 FMN-binding domain IFE08_05505 PF00890 FAD binding domain IFE08_05505 PF03358 NADPH-dependent FMN reductase IFE08_05510 PF01966 HD domain IFE08_05520 PF07687 Peptidase dimerisation domain IFE08_05520 PF01546 Peptidase family M20/M25/M40 IFE08_05525 PF13393 Histidyl-tRNA synthetase IFE08_05535 PF02654 Cobalamin-5-phosphate synthase IFE08_05540 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IFE08_05545 PF00488 MutS domain V IFE08_05545 PF01713 Smr domain IFE08_05590 PF01740 STAS domain IFE08_05610 PF01212 Beta-eliminating lyase IFE08_05615 PF00005 ABC transporter IFE08_05625 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_05630 PF01991 ATP synthase (E/31 kDa) subunit IFE08_05655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IFE08_05655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IFE08_05660 PF05872 Bacterial protein of unknown function (DUF853) IFE08_05665 PF01212 Beta-eliminating lyase IFE08_05670 PF00005 ABC transporter IFE08_05670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_05675 PF00005 ABC transporter IFE08_05675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_05680 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_05680 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_05685 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_05690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_05695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_05695 PF00672 HAMP domain IFE08_05695 PF02743 Cache domain IFE08_05700 PF13847 Methyltransferase domain IFE08_05705 PF01496 V-type ATPase 116kDa subunit family IFE08_05720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFE08_05720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IFE08_05725 PF03840 Preprotein translocase SecG subunit IFE08_05735 PF03462 PCRF domain IFE08_05735 PF00472 RF-1 domain IFE08_05740 PF05175 Methyltransferase small domain IFE08_05740 PF17827 PrmC N-terminal domain IFE08_05750 PF05598 Transposase domain (DUF772) IFE08_05750 PF01609 Transposase DDE domain IFE08_05760 PF00288 GHMP kinases N terminal domain IFE08_05760 PF08544 GHMP kinases C terminal IFE08_05765 PF04026 SpoVG IFE08_05775 PF14693 Ribosomal protein TL5, C-terminal domain IFE08_05775 PF01386 Ribosomal L25p family IFE08_05780 PF03144 Elongation factor Tu domain 2 IFE08_05780 PF00679 Elongation factor G C-terminus IFE08_05780 PF14492 Elongation Factor G, domain II IFE08_05780 PF03764 Elongation factor G, domain IV IFE08_05780 PF00009 Elongation factor Tu GTP binding domain IFE08_05790 PF02915 Rubrerythrin IFE08_05795 PF02690 Na+/Pi-cotransporter IFE08_05810 PF13520 Amino acid permease IFE08_05815 PF07722 Peptidase C26 IFE08_05820 PF07497 Rho termination factor, RNA-binding domain IFE08_05820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IFE08_05820 PF07498 Rho termination factor, N-terminal domain IFE08_05825 PF02618 YceG-like family IFE08_05835 PF00753 Metallo-beta-lactamase superfamily IFE08_05870 PF12002 MgsA AAA+ ATPase C terminal IFE08_05870 PF00004 ATPase family associated with various cellular activities (AAA) IFE08_05870 PF16193 AAA C-terminal domain IFE08_05875 PF00005 ABC transporter IFE08_05880 PF01458 Uncharacterized protein family (UPF0051) IFE08_05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IFE08_05890 PF03466 LysR substrate binding domain IFE08_05895 PF00005 ABC transporter IFE08_05905 PF00005 ABC transporter IFE08_05905 PF00664 ABC transporter transmembrane region IFE08_05925 PF02517 CPBP intramembrane metalloprotease IFE08_05940 PF00133 tRNA synthetases class I (I, L, M and V) IFE08_05940 PF09334 tRNA synthetases class I (M) IFE08_05940 PF13603 Leucyl-tRNA synthetase, Domain 2 IFE08_05940 PF08264 Anticodon-binding domain of tRNA IFE08_05960 PF09028 Mac 1 IFE08_05970 PF02463 RecF/RecN/SMC N terminal domain IFE08_05970 PF06470 SMC proteins Flexible Hinge Domain IFE08_05980 PF13525 Outer membrane lipoprotein IFE08_06005 PF00263 Bacterial type II and III secretion system protein IFE08_06005 PF03958 Bacterial type II/III secretion system short domain IFE08_06015 PF18807 Tripartite Tc toxins repeat IFE08_06015 PF05785 Rho-activating domain of cytotoxic necrotizing factor IFE08_06195 PF06969 HemN C-terminal domain IFE08_06195 PF04055 Radical SAM superfamily IFE08_06205 PF00005 ABC transporter IFE08_06210 PF01032 FecCD transport family IFE08_06220 PF00557 Metallopeptidase family M24 IFE08_06220 PF01321 Creatinase/Prolidase N-terminal domain IFE08_06225 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IFE08_06225 PF02843 Phosphoribosylglycinamide synthetase, C domain IFE08_06225 PF02844 Phosphoribosylglycinamide synthetase, N domain IFE08_06230 PF01820 D-ala D-ala ligase N-terminus IFE08_06230 PF07478 D-ala D-ala ligase C-terminus IFE08_06235 PF01256 Carbohydrate kinase IFE08_06235 PF03853 YjeF-related protein N-terminus IFE08_06245 PF03755 YicC-like family, N-terminal region IFE08_06245 PF08340 Domain of unknown function (DUF1732) IFE08_06250 PF08245 Mur ligase middle domain IFE08_06250 PF02875 Mur ligase family, glutamate ligase domain IFE08_06250 PF01225 Mur ligase family, catalytic domain IFE08_06255 PF02875 Mur ligase family, glutamate ligase domain IFE08_06255 PF08245 Mur ligase middle domain IFE08_06260 PF00849 RNA pseudouridylate synthase IFE08_06265 PF00849 RNA pseudouridylate synthase IFE08_06275 PF00398 Ribosomal RNA adenine dimethylase IFE08_06280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IFE08_06290 PF01297 Zinc-uptake complex component A periplasmic IFE08_06295 PF00186 Dihydrofolate reductase IFE08_06300 PF00809 Pterin binding enzyme IFE08_06305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IFE08_06305 PF02152 Dihydroneopterin aldolase IFE08_06310 PF01551 Peptidase family M23 IFE08_06310 PF01464 Transglycosylase SLT domain IFE08_06310 PF10145 Phage-related minor tail protein IFE08_06320 PF04542 Sigma-70 region 2 IFE08_06320 PF08281 Sigma-70, region 4 IFE08_06335 PF08544 GHMP kinases C terminal IFE08_06335 PF10509 Galactokinase galactose-binding signature IFE08_06340 PF00795 Carbon-nitrogen hydrolase IFE08_06345 PF02554 Carbon starvation protein CstA IFE08_06350 PF03819 MazG nucleotide pyrophosphohydrolase domain IFE08_06365 PF13180 PDZ domain IFE08_06365 PF03572 Peptidase family S41 IFE08_06370 PF01554 MatE IFE08_06380 PF00696 Amino acid kinase family IFE08_06400 PF13307 Helicase C-terminal domain IFE08_06400 PF06733 DEAD_2 IFE08_06485 PF08032 RNA 2'-O ribose methyltransferase substrate binding IFE08_06485 PF00588 SpoU rRNA Methylase family IFE08_06490 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IFE08_06490 PF00753 Metallo-beta-lactamase superfamily IFE08_06490 PF10996 Beta-Casp domain IFE08_06500 PF02233 NAD(P) transhydrogenase beta subunit IFE08_06510 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IFE08_06510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IFE08_06510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IFE08_06515 PF12832 MFS_1 like family IFE08_06520 PF00005 ABC transporter IFE08_06520 PF12848 ABC transporter IFE08_06530 PF00150 Cellulase (glycosyl hydrolase family 5) IFE08_06545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IFE08_06545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IFE08_06550 PF01728 FtsJ-like methyltransferase IFE08_06555 PF00343 Carbohydrate phosphorylase IFE08_06575 PF01121 Dephospho-CoA kinase IFE08_06580 PF01612 3'-5' exonuclease IFE08_06580 PF01367 5'-3' exonuclease, C-terminal SAM fold IFE08_06580 PF00476 DNA polymerase family A IFE08_06580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IFE08_06590 PF00591 Glycosyl transferase family, a/b domain IFE08_06590 PF02885 Glycosyl transferase family, helical bundle domain IFE08_06590 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IFE08_06595 PF02403 Seryl-tRNA synthetase N-terminal domain IFE08_06595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IFE08_06620 PF09335 SNARE associated Golgi protein IFE08_06630 PF00581 Rhodanese-like domain IFE08_06635 PF01609 Transposase DDE domain IFE08_06635 PF05598 Transposase domain (DUF772) IFE08_06645 PF00924 Mechanosensitive ion channel IFE08_06660 PF03781 Sulfatase-modifying factor enzyme 1 IFE08_06670 PF00581 Rhodanese-like domain IFE08_06675 PF02627 Carboxymuconolactone decarboxylase family IFE08_06690 PF01380 SIS domain IFE08_06700 PF00654 Voltage gated chloride channel IFE08_06715 PF17768 RecJ OB domain IFE08_06715 PF02272 DHHA1 domain IFE08_06715 PF01368 DHH family IFE08_06715 PF10141 Single-strand DNA-specific exonuclease, C terminal domain IFE08_06720 PF10397 Adenylosuccinate lyase C-terminus IFE08_06720 PF00206 Lyase IFE08_06725 PF08275 DNA primase catalytic core, N-terminal domain IFE08_06725 PF01807 CHC2 zinc finger IFE08_06730 PF04542 Sigma-70 region 2 IFE08_06730 PF00140 Sigma-70 factor, region 1.2 IFE08_06730 PF03979 Sigma-70 factor, region 1.1 IFE08_06730 PF04545 Sigma-70, region 4 IFE08_06730 PF04539 Sigma-70 region 3 IFE08_06765 PF00905 Penicillin binding protein transpeptidase domain IFE08_06765 PF03717 Penicillin-binding Protein dimerisation domain IFE08_06770 PF01098 Cell cycle protein IFE08_06790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IFE08_06790 PF02874 ATP synthase alpha/beta family, beta-barrel domain IFE08_06790 PF16886 ATPsynthase alpha/beta subunit N-term extension IFE08_06795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_06795 PF02743 Cache domain IFE08_06795 PF00672 HAMP domain IFE08_06810 PF01813 ATP synthase subunit D IFE08_06815 PF02874 ATP synthase alpha/beta family, beta-barrel domain IFE08_06815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IFE08_06820 PF16886 ATPsynthase alpha/beta subunit N-term extension IFE08_06820 PF02874 ATP synthase alpha/beta family, beta-barrel domain IFE08_06820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IFE08_06825 PF00156 Phosphoribosyl transferase domain IFE08_06845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IFE08_06845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IFE08_06860 PF00005 ABC transporter IFE08_06865 PF00795 Carbon-nitrogen hydrolase IFE08_06880 PF01555 DNA methylase IFE08_06900 PF01709 Transcriptional regulator IFE08_06905 PF02142 MGS-like domain IFE08_06905 PF01808 AICARFT/IMPCHase bienzyme IFE08_06910 PF08011 PD-(D/E)XK nuclease superfamily IFE08_06910 PF09820 Predicted AAA-ATPase IFE08_06915 PF02127 Aminopeptidase I zinc metalloprotease (M18) IFE08_06935 PF07977 FabA-like domain IFE08_06945 PF01235 Sodium:alanine symporter family IFE08_06965 PF02417 Chromate transporter IFE08_06980 PF02562 PhoH-like protein IFE08_06985 PF07697 7TM-HD extracellular IFE08_06985 PF01966 HD domain IFE08_06985 PF07698 7TM receptor with intracellular HD hydrolase IFE08_06990 PF02130 Uncharacterized protein family UPF0054 IFE08_06995 PF03471 Transporter associated domain IFE08_06995 PF00571 CBS domain IFE08_07000 PF00691 OmpA family IFE08_07000 PF13488 Glycine zipper IFE08_07005 PF08207 Elongation factor P (EF-P) KOW-like domain IFE08_07005 PF01132 Elongation factor P (EF-P) OB domain IFE08_07005 PF09285 Elongation factor P, C-terminal IFE08_07015 PF08669 Glycine cleavage T-protein C-terminal barrel domain IFE08_07015 PF01571 Aminomethyltransferase folate-binding domain IFE08_07025 PF01597 Glycine cleavage H-protein IFE08_07030 PF02347 Glycine cleavage system P-protein IFE08_07035 PF02347 Glycine cleavage system P-protein IFE08_07040 PF02609 Exonuclease VII small subunit IFE08_07045 PF01119 DNA mismatch repair protein, C-terminal domain IFE08_07045 PF08676 MutL C terminal dimerisation domain IFE08_07050 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IFE08_07075 PF01668 SmpB protein IFE08_07085 PF05598 Transposase domain (DUF772) IFE08_07085 PF01609 Transposase DDE domain IFE08_07095 PF10502 Signal peptidase, peptidase S26 IFE08_07100 PF04055 Radical SAM superfamily IFE08_07110 PF00301 Rubredoxin IFE08_07120 PF02277 Phosphoribosyltransferase IFE08_07130 PF13277 YmdB-like protein IFE08_07140 PF00348 Polyprenyl synthetase IFE08_07150 PF00005 ABC transporter IFE08_07180 PF01235 Sodium:alanine symporter family IFE08_07195 PF01546 Peptidase family M20/M25/M40 IFE08_07195 PF07687 Peptidase dimerisation domain IFE08_07200 PF10672 S-adenosylmethionine-dependent methyltransferase IFE08_07200 PF17785 PUA-like domain IFE08_07205 PF01165 Ribosomal protein S21 IFE08_07210 PF00533 BRCA1 C Terminus (BRCT) domain IFE08_07210 PF01653 NAD-dependent DNA ligase adenylation domain IFE08_07210 PF03120 NAD-dependent DNA ligase OB-fold domain IFE08_07230 PF00155 Aminotransferase class I and II IFE08_07235 PF04060 Putative Fe-S cluster IFE08_07240 PF07650 KH domain IFE08_07240 PF01926 50S ribosome-binding GTPase IFE08_07245 PF00575 S1 RNA binding domain IFE08_07245 PF16921 Tex protein YqgF-like domain IFE08_07245 PF09371 Tex-like protein N-terminal domain IFE08_07245 PF17674 HHH domain IFE08_07250 PF05343 M42 glutamyl aminopeptidase IFE08_07255 PF00390 Malic enzyme, N-terminal domain IFE08_07255 PF03949 Malic enzyme, NAD binding domain IFE08_07270 PF04298 Putative neutral zinc metallopeptidase IFE08_07275 PF01189 16S rRNA methyltransferase RsmB/F IFE08_07275 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF IFE08_07275 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF IFE08_07280 PF00849 RNA pseudouridylate synthase IFE08_07285 PF10672 S-adenosylmethionine-dependent methyltransferase IFE08_07290 PF06971 Putative DNA-binding protein N-terminus IFE08_07290 PF02629 CoA binding domain IFE08_07295 PF00871 Acetokinase family IFE08_07310 PF04055 Radical SAM superfamily IFE08_07315 PF00309 Sigma-54 factor, Activator interacting domain (AID) IFE08_07315 PF04963 Sigma-54 factor, core binding domain IFE08_07315 PF04552 Sigma-54, DNA binding domain IFE08_07365 PF00664 ABC transporter transmembrane region IFE08_07365 PF00005 ABC transporter IFE08_07365 PF03412 Peptidase C39 family IFE08_07385 PF13180 PDZ domain IFE08_07385 PF17820 PDZ domain IFE08_07390 PF02542 YgbB family IFE08_07395 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IFE08_07395 PF02542 YgbB family IFE08_07400 PF02559 CarD-like/TRCF domain IFE08_07415 PF12704 MacB-like periplasmic core domain IFE08_07415 PF02687 FtsX-like permease family IFE08_07415 PF00005 ABC transporter IFE08_07425 PF00005 ABC transporter IFE08_07435 PF01300 Telomere recombination IFE08_07455 PF00990 Diguanylate cyclase, GGDEF domain IFE08_07455 PF00563 EAL domain IFE08_07455 PF03707 Bacterial signalling protein N terminal repeat IFE08_07460 PF01609 Transposase DDE domain IFE08_07460 PF05598 Transposase domain (DUF772) IFE08_07475 PF02954 Bacterial regulatory protein, Fis family IFE08_07475 PF00158 Sigma-54 interaction domain IFE08_07475 PF00072 Response regulator receiver domain IFE08_07480 PF00575 S1 RNA binding domain IFE08_07500 PF17760 UvrA interaction domain IFE08_07500 PF00005 ABC transporter IFE08_07500 PF17755 UvrA DNA-binding domain IFE08_07520 PF02463 RecF/RecN/SMC N terminal domain IFE08_07540 PF01476 LysM domain IFE08_07545 PF03553 Na+/H+ antiporter family IFE08_07550 PF01053 Cys/Met metabolism PLP-dependent enzyme IFE08_07570 PF01351 Ribonuclease HII IFE08_07580 PF00005 ABC transporter IFE08_07580 PF12848 ABC transporter IFE08_07585 PF00232 Glycosyl hydrolase family 1 IFE08_07590 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IFE08_07595 PF09820 Predicted AAA-ATPase IFE08_07595 PF08011 PD-(D/E)XK nuclease superfamily IFE08_07605 PF00773 RNB domain IFE08_07610 PF05922 Peptidase inhibitor I9 IFE08_07610 PF00082 Subtilase family IFE08_07630 PF01263 Aldose 1-epimerase IFE08_07640 PF03193 RsgA GTPase IFE08_07640 PF16745 RsgA N-terminal domain IFE08_07645 PF01177 Asp/Glu/Hydantoin racemase IFE08_07655 PF01921 tRNA synthetases class I (K) IFE08_07660 PF00155 Aminotransferase class I and II IFE08_07670 PF05496 Holliday junction DNA helicase RuvB P-loop domain IFE08_07670 PF05491 RuvB C-terminal winged helix domain IFE08_07670 PF17864 RuvB AAA lid domain IFE08_07675 PF00465 Iron-containing alcohol dehydrogenase IFE08_07680 PF00483 Nucleotidyl transferase IFE08_07685 PF10431 C-terminal, D2-small domain, of ClpB protein IFE08_07685 PF02861 Clp amino terminal domain, pathogenicity island component IFE08_07685 PF00004 ATPase family associated with various cellular activities (AAA) IFE08_07685 PF07724 AAA domain (Cdc48 subfamily) IFE08_07685 PF17871 AAA lid domain IFE08_07690 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain IFE08_07695 PF02151 UvrB/uvrC motif IFE08_07705 PF00005 ABC transporter IFE08_07710 PF12704 MacB-like periplasmic core domain IFE08_07710 PF02687 FtsX-like permease family IFE08_07720 PF02881 SRP54-type protein, helical bundle domain IFE08_07720 PF00448 SRP54-type protein, GTPase domain IFE08_07735 PF03462 PCRF domain IFE08_07735 PF00472 RF-1 domain IFE08_07750 PF02743 Cache domain IFE08_07750 PF00672 HAMP domain IFE08_07750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_07755 PF08534 Redoxin IFE08_07760 PF13361 UvrD-like helicase C-terminal domain IFE08_07760 PF00580 UvrD/REP helicase N-terminal domain IFE08_07770 PF00679 Elongation factor G C-terminus IFE08_07770 PF03144 Elongation factor Tu domain 2 IFE08_07770 PF00009 Elongation factor Tu GTP binding domain IFE08_07770 PF03764 Elongation factor G, domain IV IFE08_07770 PF14492 Elongation Factor G, domain II IFE08_07775 PF00156 Phosphoribosyl transferase domain IFE08_07775 PF13537 Glutamine amidotransferase domain IFE08_07785 PF13726 Na+-H+ antiporter family IFE08_07785 PF03553 Na+/H+ antiporter family IFE08_07800 PF01264 Chorismate synthase IFE08_07805 PF00440 Bacterial regulatory proteins, tetR family IFE08_07805 PF17932 Tetracyclin repressor-like, C-terminal domain IFE08_07810 PF00005 ABC transporter IFE08_07810 PF00664 ABC transporter transmembrane region IFE08_07815 PF00005 ABC transporter IFE08_07830 PF12848 ABC transporter IFE08_07830 PF16326 ABC transporter C-terminal domain IFE08_07830 PF00005 ABC transporter IFE08_07835 PF08239 Bacterial SH3 domain IFE08_07840 PF00005 ABC transporter IFE08_07840 PF00664 ABC transporter transmembrane region IFE08_07840 PF03412 Peptidase C39 family IFE08_07895 PF00005 ABC transporter IFE08_07895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_07900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_07900 PF00005 ABC transporter IFE08_07905 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_07905 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_07910 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_07920 PF01523 Putative modulator of DNA gyrase IFE08_07935 PF00375 Sodium:dicarboxylate symporter family IFE08_07945 PF01973 Protein of unknown function DUF115 IFE08_07950 PF00226 DnaJ domain IFE08_07950 PF00684 DnaJ central domain IFE08_07950 PF01556 DnaJ C terminal domain IFE08_07955 PF00012 Hsp70 protein IFE08_07960 PF01025 GrpE IFE08_07965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IFE08_07970 PF00586 AIR synthase related protein, N-terminal domain IFE08_07970 PF02769 AIR synthase related protein, C-terminal domain IFE08_07975 PF08501 Shikimate dehydrogenase substrate binding domain IFE08_07975 PF01488 Shikimate / quinate 5-dehydrogenase IFE08_07975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IFE08_07980 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IFE08_07990 PF02779 Transketolase, pyrimidine binding domain IFE08_07990 PF00456 Transketolase, thiamine diphosphate binding domain IFE08_07995 PF02237 Biotin protein ligase C terminal domain IFE08_07995 PF08279 HTH domain IFE08_07995 PF03099 Biotin/lipoate A/B protein ligase family IFE08_08000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IFE08_08005 PF01039 Carboxyl transferase domain IFE08_08010 PF00289 Biotin carboxylase, N-terminal domain IFE08_08010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IFE08_08010 PF02785 Biotin carboxylase C-terminal domain IFE08_08015 PF00364 Biotin-requiring enzyme IFE08_08020 PF07055 Enoyl reductase FAD binding domain IFE08_08020 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IFE08_08020 PF12241 Trans-2-enoyl-CoA reductase catalytic region IFE08_08025 PF02801 Beta-ketoacyl synthase, C-terminal domain IFE08_08025 PF00109 Beta-ketoacyl synthase, N-terminal domain IFE08_08035 PF00698 Acyl transferase domain IFE08_08045 PF05598 Transposase domain (DUF772) IFE08_08045 PF01609 Transposase DDE domain IFE08_08050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IFE08_08050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IFE08_08055 PF01609 Transposase DDE domain IFE08_08055 PF05598 Transposase domain (DUF772) IFE08_08060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IFE08_08060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IFE08_08070 PF01336 OB-fold nucleic acid binding domain IFE08_08070 PF02938 GAD domain IFE08_08070 PF00152 tRNA synthetases class II (D, K and N) IFE08_08085 PF03062 MBOAT, membrane-bound O-acyltransferase family IFE08_08095 PF01145 SPFH domain / Band 7 family IFE08_08100 PF01145 SPFH domain / Band 7 family IFE08_08105 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase IFE08_08110 PF08218 Citrate lyase ligase C-terminal domain IFE08_08115 PF05681 Fumarate hydratase (Fumerase) IFE08_08115 PF05683 Fumarase C-terminus IFE08_08120 PF05681 Fumarate hydratase (Fumerase) IFE08_08125 PF00700 Bacterial flagellin C-terminal helical region IFE08_08125 PF00669 Bacterial flagellin N-terminal helical region IFE08_08130 PF01584 CheW-like domain IFE08_08140 PF01513 ATP-NAD kinase IFE08_08145 PF00005 ABC transporter IFE08_08145 PF00664 ABC transporter transmembrane region IFE08_08150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IFE08_08150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IFE08_08155 PF00221 Aromatic amino acid lyase IFE08_08165 PF00005 ABC transporter IFE08_08185 PF03477 ATP cone domain IFE08_08220 PF01609 Transposase DDE domain IFE08_08220 PF05598 Transposase domain (DUF772) IFE08_08270 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IFE08_08275 PF01850 PIN domain IFE08_08280 PF13495 Phage integrase, N-terminal SAM-like domain IFE08_08280 PF00589 Phage integrase family IFE08_08285 PF00672 HAMP domain IFE08_08285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_08285 PF02743 Cache domain IFE08_08300 PF02743 Cache domain IFE08_08300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_08300 PF00672 HAMP domain IFE08_08310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_08310 PF00672 HAMP domain IFE08_08310 PF02743 Cache domain IFE08_08315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_08315 PF00672 HAMP domain IFE08_08315 PF02743 Cache domain IFE08_08320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_08320 PF02743 Cache domain IFE08_08320 PF00672 HAMP domain IFE08_08325 PF17200 Single Cache domain 2 IFE08_08325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_08325 PF00672 HAMP domain IFE08_08330 PF01609 Transposase DDE domain IFE08_08330 PF05598 Transposase domain (DUF772) IFE08_08335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_08335 PF00672 HAMP domain IFE08_08335 PF02743 Cache domain IFE08_08360 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system IFE08_08365 PF13495 Phage integrase, N-terminal SAM-like domain IFE08_08365 PF00589 Phage integrase family IFE08_08460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IFE08_08460 PF03129 Anticodon binding domain IFE08_08460 PF04073 Aminoacyl-tRNA editing domain IFE08_08465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_08465 PF00005 ABC transporter IFE08_08470 PF00005 ABC transporter IFE08_08470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_08475 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_08475 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_08480 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_08485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_08490 PF00892 EamA-like transporter family IFE08_08495 PF05670 NFACT protein RNA binding domain IFE08_08510 PF00534 Glycosyl transferases group 1 IFE08_08510 PF08323 Starch synthase catalytic domain IFE08_08520 PF04260 Protein of unknown function (DUF436) IFE08_08535 PF00933 Glycosyl hydrolase family 3 N terminal domain IFE08_08550 PF02874 ATP synthase alpha/beta family, beta-barrel domain IFE08_08550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IFE08_08550 PF18269 T3SS EscN ATPase C-terminal domain IFE08_08555 PF02108 Flagellar assembly protein FliH IFE08_08560 PF01706 FliG C-terminal domain IFE08_08560 PF14841 FliG middle domain IFE08_08560 PF14842 FliG N-terminal domain IFE08_08565 PF08345 Flagellar M-ring protein C-terminal IFE08_08565 PF01514 Secretory protein of YscJ/FliF family IFE08_08570 PF02049 Flagellar hook-basal body complex protein FliE IFE08_08575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IFE08_08575 PF00460 Flagella basal body rod protein IFE08_08580 PF00460 Flagella basal body rod protein IFE08_08585 PF07724 AAA domain (Cdc48 subfamily) IFE08_08585 PF00004 ATPase family associated with various cellular activities (AAA) IFE08_08590 PF00227 Proteasome subunit IFE08_08595 PF02899 Phage integrase, N-terminal SAM-like domain IFE08_08595 PF00589 Phage integrase family IFE08_08600 PF01751 Toprim domain IFE08_08600 PF01396 Topoisomerase DNA binding C4 zinc finger IFE08_08600 PF01131 DNA topoisomerase IFE08_08605 PF02481 DNA recombination-mediator protein A IFE08_08605 PF17782 DprA winged helix domain IFE08_08615 PF02899 Phage integrase, N-terminal SAM-like domain IFE08_08615 PF00589 Phage integrase family IFE08_08620 PF00091 Tubulin/FtsZ family, GTPase domain IFE08_08620 PF12327 FtsZ family, C-terminal domain IFE08_08625 PF02491 SHS2 domain inserted in FTSA IFE08_08635 PF01098 Cell cycle protein IFE08_08640 PF02875 Mur ligase family, glutamate ligase domain IFE08_08640 PF01225 Mur ligase family, catalytic domain IFE08_08640 PF08245 Mur ligase middle domain IFE08_08650 PF01795 MraW methylase family IFE08_08655 PF02381 MraZ protein, putative antitoxin-like IFE08_08665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IFE08_08665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IFE08_08670 PF10282 Lactonase, 7-bladed beta-propeller IFE08_08680 PF00270 DEAD/DEAH box helicase IFE08_08680 PF00271 Helicase conserved C-terminal domain IFE08_08690 PF09338 Glycine/sarcosine/betaine reductase component B subunits IFE08_08705 PF09186 Domain of unknown function (DUF1949) IFE08_08705 PF01205 Uncharacterized protein family UPF0029 IFE08_08725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_08730 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_08735 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_08735 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_08740 PF00005 ABC transporter IFE08_08740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_08750 PF08241 Methyltransferase domain IFE08_08755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IFE08_08765 PF00679 Elongation factor G C-terminus IFE08_08765 PF14492 Elongation Factor G, domain II IFE08_08765 PF03144 Elongation factor Tu domain 2 IFE08_08765 PF00009 Elongation factor Tu GTP binding domain IFE08_08765 PF06421 GTP-binding protein LepA C-terminus IFE08_08770 PF00156 Phosphoribosyl transferase domain IFE08_08775 PF00672 HAMP domain IFE08_08775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_08775 PF02743 Cache domain IFE08_08780 PF17820 PDZ domain IFE08_08780 PF02163 Peptidase family M50 IFE08_08785 PF13288 DXP reductoisomerase C-terminal domain IFE08_08785 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IFE08_08785 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IFE08_08795 PF01255 Putative undecaprenyl diphosphate synthase IFE08_08800 PF01765 Ribosome recycling factor IFE08_08805 PF00889 Elongation factor TS IFE08_08810 PF00318 Ribosomal protein S2 IFE08_08865 PF05488 PAAR motif IFE08_08865 PF05593 RHS Repeat IFE08_08875 PF05488 PAAR motif IFE08_08875 PF05593 RHS Repeat IFE08_08895 PF11480 Colicin-E5 Imm protein IFE08_08965 PF02743 Cache domain IFE08_08965 PF00672 HAMP domain IFE08_08965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_08975 PF01523 Putative modulator of DNA gyrase IFE08_08980 PF01523 Putative modulator of DNA gyrase IFE08_08985 PF06857 Malonate decarboxylase delta subunit (MdcD) IFE08_08990 PF03328 HpcH/HpaI aldolase/citrate lyase family IFE08_08995 PF04223 Citrate lyase, alpha subunit (CitF) IFE08_09000 PF09107 Elongation factor SelB, winged helix IFE08_09000 PF00009 Elongation factor Tu GTP binding domain IFE08_09000 PF03144 Elongation factor Tu domain 2 IFE08_09000 PF09106 Elongation factor SelB, winged helix IFE08_09000 PF09105 Elongation factor SelB, winged helix IFE08_09010 PF01176 Translation initiation factor 1A / IF-1 IFE08_09015 PF00684 DnaJ central domain IFE08_09015 PF01556 DnaJ C terminal domain IFE08_09015 PF00226 DnaJ domain IFE08_09020 PF00696 Amino acid kinase family IFE08_09025 PF01648 4'-phosphopantetheinyl transferase superfamily IFE08_09035 PF02457 DisA bacterial checkpoint controller nucleotide-binding IFE08_09040 PF02780 Transketolase, C-terminal domain IFE08_09040 PF02779 Transketolase, pyrimidine binding domain IFE08_09040 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IFE08_09045 PF13180 PDZ domain IFE08_09045 PF17820 PDZ domain IFE08_09050 PF02545 Maf-like protein IFE08_09065 PF00669 Bacterial flagellin N-terminal helical region IFE08_09065 PF00700 Bacterial flagellin C-terminal helical region IFE08_09070 PF00700 Bacterial flagellin C-terminal helical region IFE08_09070 PF00669 Bacterial flagellin N-terminal helical region IFE08_09075 PF03646 FlaG protein IFE08_09080 PF07195 Flagellar hook-associated protein 2 C-terminus IFE08_09080 PF02465 Flagellar hook-associated protein 2 N-terminus IFE08_09095 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IFE08_09105 PF00072 Response regulator receiver domain IFE08_09110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IFE08_09110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IFE08_09110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IFE08_09110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IFE08_09115 PF00929 Exonuclease IFE08_09120 PF00158 Sigma-54 interaction domain IFE08_09120 PF00072 Response regulator receiver domain IFE08_09120 PF02954 Bacterial regulatory protein, Fis family IFE08_09130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IFE08_09175 PF13186 Iron-sulfur cluster-binding domain IFE08_09190 PF01625 Peptide methionine sulfoxide reductase IFE08_09190 PF01641 SelR domain IFE08_09195 PF00912 Transglycosylase IFE08_09195 PF00905 Penicillin binding protein transpeptidase domain IFE08_09200 PF02623 FliW protein IFE08_09205 PF02599 Global regulator protein family IFE08_09210 PF05857 TraX protein IFE08_09215 PF00579 tRNA synthetases class I (W and Y) IFE08_09225 PF00890 FAD binding domain IFE08_09225 PF14537 Cytochrome c3 IFE08_09255 PF01078 Magnesium chelatase, subunit ChlI IFE08_09255 PF13335 Magnesium chelatase, subunit ChlI C-terminal IFE08_09260 PF03806 AbgT putative transporter family IFE08_09270 PF04551 GcpE protein IFE08_09290 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFE08_09295 PF01266 FAD dependent oxidoreductase IFE08_09300 PF00460 Flagella basal body rod protein IFE08_09300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IFE08_09305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IFE08_09305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IFE08_09320 PF01029 NusB family IFE08_09325 PF13145 PPIC-type PPIASE domain IFE08_09330 PF01411 tRNA synthetases class II (A) IFE08_09330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IFE08_09355 PF00990 Diguanylate cyclase, GGDEF domain IFE08_09365 PF08011 PD-(D/E)XK nuclease superfamily IFE08_09365 PF09820 Predicted AAA-ATPase IFE08_09370 PF07517 SecA DEAD-like domain IFE08_09370 PF07516 SecA Wing and Scaffold domain IFE08_09370 PF02810 SEC-C motif IFE08_09370 PF01043 SecA preprotein cross-linking domain IFE08_09380 PF00551 Formyl transferase IFE08_09395 PF00326 Prolyl oligopeptidase family IFE08_09400 PF00391 PEP-utilising enzyme, mobile domain IFE08_09400 PF00224 Pyruvate kinase, barrel domain IFE08_09400 PF02887 Pyruvate kinase, alpha/beta domain IFE08_09410 PF01195 Peptidyl-tRNA hydrolase IFE08_09415 PF13302 Acetyltransferase (GNAT) domain IFE08_09420 PF00574 Clp protease IFE08_09425 PF01555 DNA methylase IFE08_09460 PF00027 Cyclic nucleotide-binding domain IFE08_09460 PF13545 Crp-like helix-turn-helix domain IFE08_09465 PF01252 Signal peptidase (SPase) II IFE08_09470 PF02424 ApbE family IFE08_09475 PF05958 tRNA (Uracil-5-)-methyltransferase IFE08_09515 PF03781 Sulfatase-modifying factor enzyme 1 IFE08_09520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IFE08_09520 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFE08_09525 PF02256 Iron hydrogenase small subunit IFE08_09525 PF00037 4Fe-4S binding domain IFE08_09525 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IFE08_09525 PF02906 Iron only hydrogenase large subunit, C-terminal domain IFE08_09530 PF00919 Uncharacterized protein family UPF0004 IFE08_09530 PF04055 Radical SAM superfamily IFE08_09530 PF01938 TRAM domain IFE08_09535 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IFE08_09535 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IFE08_09540 PF01891 Cobalt uptake substrate-specific transmembrane region IFE08_09550 PF01008 Initiation factor 2 subunit family IFE08_09570 PF00118 TCP-1/cpn60 chaperonin family IFE08_09580 PF07009 NusG domain II IFE08_09585 PF12704 MacB-like periplasmic core domain IFE08_09585 PF02687 FtsX-like permease family IFE08_09585 PF00005 ABC transporter IFE08_09590 PF01136 Peptidase family U32 IFE08_09590 PF16325 Peptidase family U32 C-terminal domain IFE08_09595 PF07859 alpha/beta hydrolase fold IFE08_09600 PF00005 ABC transporter IFE08_09600 PF00664 ABC transporter transmembrane region IFE08_09625 PF08011 PD-(D/E)XK nuclease superfamily IFE08_09625 PF09820 Predicted AAA-ATPase IFE08_09635 PF00005 ABC transporter IFE08_09650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IFE08_09655 PF18073 Rubredoxin metal binding domain IFE08_09655 PF06745 KaiC IFE08_09680 PF00580 UvrD/REP helicase N-terminal domain IFE08_09680 PF13361 UvrD-like helicase C-terminal domain IFE08_09685 PF02824 TGS domain IFE08_09685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IFE08_09685 PF03129 Anticodon binding domain IFE08_09685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IFE08_09705 PF00005 ABC transporter IFE08_09710 PF02355 Protein export membrane protein IFE08_09715 PF02355 Protein export membrane protein IFE08_09720 PF02699 Preprotein translocase subunit IFE08_09725 PF01783 Ribosomal L32p protein family IFE08_09730 PF00550 Phosphopantetheine attachment site IFE08_09735 PF14622 Ribonuclease-III-like IFE08_09735 PF00035 Double-stranded RNA binding motif IFE08_09740 PF00271 Helicase conserved C-terminal domain IFE08_09740 PF00270 DEAD/DEAH box helicase IFE08_09740 PF18074 Primosomal protein N C-terminal domain IFE08_09740 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IFE08_09740 PF17764 3′ DNA-binding domain (3′BD) IFE08_09745 PF03167 Uracil DNA glycosylase superfamily IFE08_09760 PF00579 tRNA synthetases class I (W and Y) IFE08_09765 PF05191 Adenylate kinase, active site lid IFE08_09785 PF04225 Opacity-associated protein A LysM-like domain IFE08_09785 PF01551 Peptidase family M23 IFE08_09795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_09795 PF00672 HAMP domain IFE08_09795 PF02743 Cache domain IFE08_09810 PF05598 Transposase domain (DUF772) IFE08_09810 PF01609 Transposase DDE domain IFE08_09825 PF04851 Type III restriction enzyme, res subunit IFE08_09825 PF17757 UvrB interaction domain IFE08_09825 PF02151 UvrB/uvrC motif IFE08_09825 PF00271 Helicase conserved C-terminal domain IFE08_09825 PF12344 Ultra-violet resistance protein B IFE08_09830 PF01197 Ribosomal protein L31 IFE08_09845 PF10415 Fumarase C C-terminus IFE08_09845 PF00206 Lyase IFE08_09850 PF08011 PD-(D/E)XK nuclease superfamily IFE08_09850 PF09820 Predicted AAA-ATPase IFE08_09855 PF00270 DEAD/DEAH box helicase IFE08_09855 PF17757 UvrB interaction domain IFE08_09855 PF03461 TRCF domain IFE08_09855 PF00271 Helicase conserved C-terminal domain IFE08_09855 PF02559 CarD-like/TRCF domain IFE08_09865 PF01370 NAD dependent epimerase/dehydratase family IFE08_09870 PF00403 Heavy-metal-associated domain IFE08_09875 PF01022 Bacterial regulatory protein, arsR family IFE08_09890 PF00005 ABC transporter IFE08_09895 PF00588 SpoU rRNA Methylase family IFE08_09900 PF11849 Domain of unknown function (DUF3369) IFE08_09905 PF03841 L-seryl-tRNA selenium transferase IFE08_09905 PF12390 Selenocysteine synthase N terminal IFE08_09910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IFE08_09910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IFE08_09920 PF12826 Helix-hairpin-helix motif IFE08_09920 PF04002 RadC-like JAB domain IFE08_09925 PF08534 Redoxin IFE08_09935 PF12801 4Fe-4S binding domain IFE08_09935 PF04205 FMN-binding domain IFE08_09940 PF00664 ABC transporter transmembrane region IFE08_09940 PF00005 ABC transporter IFE08_09975 PF03033 Glycosyltransferase family 28 N-terminal domain IFE08_09975 PF04101 Glycosyltransferase family 28 C-terminal domain IFE08_09985 PF00440 Bacterial regulatory proteins, tetR family IFE08_09985 PF08361 MAATS-type transcriptional repressor, C-terminal region IFE08_09990 PF04954 Siderophore-interacting protein IFE08_09990 PF08021 Siderophore-interacting FAD-binding domain IFE08_09990 PF00005 ABC transporter IFE08_09990 PF00664 ABC transporter transmembrane region IFE08_09995 PF00664 ABC transporter transmembrane region IFE08_09995 PF00005 ABC transporter IFE08_10115 PF04072 Leucine carboxyl methyltransferase IFE08_10140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IFE08_10190 PF00849 RNA pseudouridylate synthase IFE08_10190 PF01479 S4 domain IFE08_10205 PF10531 SLBB domain IFE08_10205 PF13237 4Fe-4S dicluster domain IFE08_10205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IFE08_10205 PF13375 RnfC Barrel sandwich hybrid domain IFE08_10235 PF02245 Methylpurine-DNA glycosylase (MPG) IFE08_10250 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_10255 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_10260 PF00005 ABC transporter IFE08_10260 PF17912 MalK OB fold domain IFE08_10260 PF03459 TOBE domain IFE08_10265 PF02446 4-alpha-glucanotransferase IFE08_10270 PF00005 ABC transporter IFE08_10275 PF00005 ABC transporter IFE08_10280 PF02576 RimP N-terminal domain IFE08_10280 PF17384 RimP C-terminal SH3 domain IFE08_10285 PF08529 NusA N-terminal domain IFE08_10285 PF00575 S1 RNA binding domain IFE08_10285 PF13184 NusA-like KH domain IFE08_10290 PF00009 Elongation factor Tu GTP binding domain IFE08_10290 PF11987 Translation-initiation factor 2 IFE08_10290 PF04760 Translation initiation factor IF-2, N-terminal region IFE08_10295 PF02033 Ribosome-binding factor A IFE08_10300 PF01509 TruB family pseudouridylate synthase (N terminal domain) IFE08_10315 PF02492 CobW/HypB/UreG, nucleotide-binding domain IFE08_10320 PF00164 Ribosomal protein S12/S23 IFE08_10325 PF00177 Ribosomal protein S7p/S5e IFE08_10330 PF00877 NlpC/P60 family IFE08_10335 PF13193 AMP-binding enzyme C-terminal domain IFE08_10335 PF00501 AMP-binding enzyme IFE08_10350 PF00664 ABC transporter transmembrane region IFE08_10350 PF00005 ABC transporter IFE08_10355 PF03412 Peptidase C39 family IFE08_10355 PF00005 ABC transporter IFE08_10355 PF00664 ABC transporter transmembrane region IFE08_10400 PF00005 ABC transporter IFE08_10405 PF12683 Protein of unknown function (DUF3798) IFE08_10420 PF01784 NIF3 (NGG1p interacting factor 3) IFE08_10430 PF02637 GatB domain IFE08_10430 PF02934 GatB/GatE catalytic domain IFE08_10435 PF00106 short chain dehydrogenase IFE08_10445 PF02441 Flavoprotein IFE08_10445 PF04127 DNA / pantothenate metabolism flavoprotein IFE08_10465 PF04011 LemA family IFE08_10470 PF01259 SAICAR synthetase IFE08_10475 PF00731 AIR carboxylase IFE08_10480 PF01636 Phosphotransferase enzyme family IFE08_10490 PF00005 ABC transporter IFE08_10495 PF00005 ABC transporter IFE08_10515 PF00691 OmpA family IFE08_10520 PF08239 Bacterial SH3 domain IFE08_10520 PF01476 LysM domain IFE08_10520 PF00877 NlpC/P60 family IFE08_10535 PF00005 ABC transporter IFE08_10535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_10540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_10540 PF00005 ABC transporter IFE08_10545 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_10545 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_10550 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_10560 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IFE08_10560 PF00326 Prolyl oligopeptidase family IFE08_10565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_10575 PF01467 Cytidylyltransferase-like IFE08_10600 PF12627 Probable RNA and SrmB- binding site of polymerase A IFE08_10600 PF12626 Polymerase A arginine-rich C-terminus IFE08_10600 PF01743 Poly A polymerase head domain IFE08_10625 PF01966 HD domain IFE08_10640 PF02386 Cation transport protein IFE08_10645 PF02080 TrkA-C domain IFE08_10645 PF02254 TrkA-N domain IFE08_10670 PF01168 Alanine racemase, N-terminal domain IFE08_10670 PF00842 Alanine racemase, C-terminal domain IFE08_10675 PF02401 LytB protein IFE08_10680 PF03330 Lytic transglycolase IFE08_10685 PF05198 Translation initiation factor IF-3, N-terminal domain IFE08_10685 PF00707 Translation initiation factor IF-3, C-terminal domain IFE08_10690 PF01632 Ribosomal protein L35 IFE08_10695 PF00453 Ribosomal protein L20 IFE08_10705 PF05164 Cell division protein ZapA IFE08_10710 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IFE08_10720 PF00005 ABC transporter IFE08_10725 PF00005 ABC transporter IFE08_10730 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_10735 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_10740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_10745 PF13673 Acetyltransferase (GNAT) domain IFE08_10750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_10750 PF02743 Cache domain IFE08_10750 PF00672 HAMP domain IFE08_10755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_10755 PF02743 Cache domain IFE08_10755 PF00672 HAMP domain IFE08_10765 PF02719 Polysaccharide biosynthesis protein IFE08_10780 PF01245 Ribosomal protein L19 IFE08_10785 PF01746 tRNA (Guanine-1)-methyltransferase IFE08_10790 PF01782 RimM N-terminal domain IFE08_10800 PF00886 Ribosomal protein S16 IFE08_10805 PF00391 PEP-utilising enzyme, mobile domain IFE08_10805 PF02896 PEP-utilising enzyme, TIM barrel domain IFE08_10805 PF05524 PEP-utilising enzyme, N-terminal IFE08_10815 PF01926 50S ribosome-binding GTPase IFE08_10815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IFE08_10825 PF01609 Transposase DDE domain IFE08_10825 PF05598 Transposase domain (DUF772) IFE08_10835 PF17922 Tetracyclin repressor-like, C-terminal domain IFE08_10835 PF00440 Bacterial regulatory proteins, tetR family IFE08_10845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IFE08_10845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IFE08_10845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IFE08_10845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IFE08_10850 PF02308 MgtC family IFE08_10870 PF05598 Transposase domain (DUF772) IFE08_10870 PF01609 Transposase DDE domain IFE08_10880 PF00005 ABC transporter IFE08_10885 PF00905 Penicillin binding protein transpeptidase domain IFE08_10885 PF00912 Transglycosylase IFE08_10885 PF06832 Penicillin-Binding Protein C-terminus Family IFE08_10890 PF05598 Transposase domain (DUF772) IFE08_10890 PF01609 Transposase DDE domain IFE08_10895 PF00905 Penicillin binding protein transpeptidase domain IFE08_10895 PF00912 Transglycosylase IFE08_10895 PF06832 Penicillin-Binding Protein C-terminus Family IFE08_10900 PF02190 ATP-dependent protease La (LON) substrate-binding domain IFE08_10900 PF05362 Lon protease (S16) C-terminal proteolytic domain IFE08_10900 PF00004 ATPase family associated with various cellular activities (AAA) IFE08_10915 PF01026 TatD related DNase IFE08_10925 PF02769 AIR synthase related protein, C-terminal domain IFE08_10925 PF00586 AIR synthase related protein, N-terminal domain IFE08_10930 PF00207 Alpha-2-macroglobulin family IFE08_10930 PF07703 Alpha-2-macroglobulin bait region domain IFE08_10930 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain IFE08_10930 PF11974 Bacterial alpha-2-macroglobulin MG3 domain IFE08_10930 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain IFE08_10930 PF17962 Bacterial macroglobulin domain 6 IFE08_10930 PF01835 MG2 domain IFE08_10940 PF02674 Colicin V production protein IFE08_10945 PF09115 DNA polymerase III, delta subunit, C terminal IFE08_10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFE08_10950 PF13426 PAS domain IFE08_10950 PF13188 PAS domain IFE08_10950 PF00989 PAS fold IFE08_10950 PF00512 His Kinase A (phospho-acceptor) domain IFE08_10955 PF00578 AhpC/TSA family IFE08_10955 PF10417 C-terminal domain of 1-Cys peroxiredoxin IFE08_10960 PF03372 Endonuclease/Exonuclease/phosphatase family IFE08_10965 PF00557 Metallopeptidase family M24 IFE08_10970 PF00684 DnaJ central domain IFE08_10970 PF01556 DnaJ C terminal domain IFE08_10970 PF00226 DnaJ domain IFE08_10990 PF01609 Transposase DDE domain IFE08_10990 PF05598 Transposase domain (DUF772) IFE08_10995 PF00211 Adenylate and Guanylate cyclase catalytic domain IFE08_10995 PF00672 HAMP domain IFE08_11010 PF01973 Protein of unknown function DUF115 IFE08_11045 PF02653 Branched-chain amino acid transport system / permease component IFE08_11050 PF00830 Ribosomal L28 family IFE08_11065 PF03193 RsgA GTPase IFE08_11075 PF00005 ABC transporter IFE08_11080 PF01032 FecCD transport family IFE08_11090 PF00664 ABC transporter transmembrane region IFE08_11090 PF00005 ABC transporter IFE08_11095 PF00005 ABC transporter IFE08_11095 PF00664 ABC transporter transmembrane region IFE08_11105 PF01196 Ribosomal protein L17 IFE08_11110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IFE08_11110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IFE08_11110 PF01000 RNA polymerase Rpb3/RpoA insert domain IFE08_11115 PF00411 Ribosomal protein S11 IFE08_11120 PF00416 Ribosomal protein S13/S18 IFE08_11125 PF00444 Ribosomal protein L36 IFE08_11130 PF00344 SecY translocase IFE08_11135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IFE08_11140 PF00327 Ribosomal protein L30p/L7e IFE08_11145 PF00333 Ribosomal protein S5, N-terminal domain IFE08_11145 PF03719 Ribosomal protein S5, C-terminal domain IFE08_11150 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IFE08_11155 PF00347 Ribosomal protein L6 IFE08_11160 PF00410 Ribosomal protein S8 IFE08_11165 PF00253 Ribosomal protein S14p/S29e IFE08_11170 PF00281 Ribosomal protein L5 IFE08_11170 PF00673 ribosomal L5P family C-terminus IFE08_11175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IFE08_11175 PF00467 KOW motif IFE08_11180 PF00238 Ribosomal protein L14p/L23e IFE08_11185 PF00366 Ribosomal protein S17 IFE08_11190 PF00831 Ribosomal L29 protein IFE08_11195 PF00252 Ribosomal protein L16p/L10e IFE08_11200 PF07650 KH domain IFE08_11200 PF00189 Ribosomal protein S3, C-terminal domain IFE08_11205 PF00237 Ribosomal protein L22p/L17e IFE08_11210 PF00203 Ribosomal protein S19 IFE08_11215 PF00181 Ribosomal Proteins L2, RNA binding domain IFE08_11215 PF03947 Ribosomal Proteins L2, C-terminal domain IFE08_11220 PF00276 Ribosomal protein L23 IFE08_11225 PF00573 Ribosomal protein L4/L1 family IFE08_11230 PF00297 Ribosomal protein L3 IFE08_11235 PF00338 Ribosomal protein S10p/S20e IFE08_11240 PF00009 Elongation factor Tu GTP binding domain IFE08_11240 PF03144 Elongation factor Tu domain 2 IFE08_11240 PF03143 Elongation factor Tu C-terminal domain IFE08_11245 PF07726 ATPase family associated with various cellular activities (AAA) IFE08_11245 PF17863 AAA lid domain IFE08_11250 PF02511 Thymidylate synthase complementing protein IFE08_11280 PF01434 Peptidase family M41 IFE08_11280 PF00004 ATPase family associated with various cellular activities (AAA) IFE08_11280 PF17862 AAA+ lid domain IFE08_11295 PF02743 Cache domain IFE08_11295 PF00672 HAMP domain IFE08_11295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_11310 PF00934 PE family IFE08_11310 PF07859 alpha/beta hydrolase fold IFE08_11335 PF00005 ABC transporter IFE08_11335 PF12848 ABC transporter IFE08_11355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IFE08_11355 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFE08_11385 PF09820 Predicted AAA-ATPase IFE08_11385 PF08011 PD-(D/E)XK nuclease superfamily IFE08_11395 PF08021 Siderophore-interacting FAD-binding domain IFE08_11395 PF00005 ABC transporter IFE08_11395 PF04954 Siderophore-interacting protein IFE08_11395 PF00664 ABC transporter transmembrane region IFE08_11400 PF00664 ABC transporter transmembrane region IFE08_11400 PF00005 ABC transporter IFE08_11415 PF00005 ABC transporter IFE08_11425 PF00440 Bacterial regulatory proteins, tetR family IFE08_11425 PF08359 YsiA-like protein, C-terminal region IFE08_11430 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IFE08_11430 PF00391 PEP-utilising enzyme, mobile domain IFE08_11450 PF00005 ABC transporter IFE08_11460 PF06445 GyrI-like small molecule binding domain IFE08_11460 PF12833 Helix-turn-helix domain IFE08_11465 PF08279 HTH domain IFE08_11465 PF13280 WYL domain IFE08_11480 PF06445 GyrI-like small molecule binding domain IFE08_11480 PF12833 Helix-turn-helix domain IFE08_11485 PF04205 FMN-binding domain IFE08_11485 PF00890 FAD binding domain IFE08_11490 PF00005 ABC transporter IFE08_11495 PF01032 FecCD transport family IFE08_11500 PF01032 FecCD transport family IFE08_11505 PF01497 Periplasmic binding protein IFE08_11520 PF17391 Urocanase N-terminal domain IFE08_11520 PF17392 Urocanase C-terminal domain IFE08_11520 PF01175 Urocanase Rossmann-like domain IFE08_11545 PF08011 PD-(D/E)XK nuclease superfamily IFE08_11545 PF09820 Predicted AAA-ATPase IFE08_11550 PF13654 AAA domain IFE08_11550 PF05362 Lon protease (S16) C-terminal proteolytic domain IFE08_11560 PF08448 PAS fold IFE08_11560 PF00990 Diguanylate cyclase, GGDEF domain IFE08_11565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFE08_11570 PF05175 Methyltransferase small domain IFE08_11580 PF00365 Phosphofructokinase IFE08_11585 PF13662 Toprim domain IFE08_11585 PF02132 RecR protein IFE08_11590 PF02575 YbaB/EbfC DNA-binding family IFE08_11595 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IFE08_11595 PF02769 AIR synthase related protein, C-terminal domain IFE08_11595 PF00586 AIR synthase related protein, N-terminal domain IFE08_11610 PF00121 Triosephosphate isomerase IFE08_11615 PF16363 GDP-mannose 4,6 dehydratase IFE08_11620 PF02773 S-adenosylmethionine synthetase, C-terminal domain IFE08_11620 PF00438 S-adenosylmethionine synthetase, N-terminal domain IFE08_11620 PF02772 S-adenosylmethionine synthetase, central domain IFE08_11625 PF09820 Predicted AAA-ATPase IFE08_11625 PF08011 PD-(D/E)XK nuclease superfamily IFE08_11630 PF01554 MatE IFE08_11635 PF00551 Formyl transferase IFE08_11635 PF02911 Formyl transferase, C-terminal domain IFE08_11640 PF01327 Polypeptide deformylase IFE08_11645 PF00300 Histidine phosphatase superfamily (branch 1) IFE08_11655 PF03793 PASTA domain IFE08_11665 PF03796 DnaB-like helicase C terminal domain IFE08_11665 PF00772 DnaB-like helicase N terminal domain IFE08_11680 PF01713 Smr domain IFE08_11680 PF00488 MutS domain V IFE08_11695 PF07584 Aerotolerance regulator N-terminal IFE08_11695 PF00092 von Willebrand factor type A domain IFE08_11700 PF00092 von Willebrand factor type A domain IFE08_11710 PF01882 Protein of unknown function DUF58 IFE08_11720 PF17131 Outer membrane lipoprotein-sorting protein IFE08_11730 PF00440 Bacterial regulatory proteins, tetR family IFE08_11740 PF00950 ABC 3 transport family IFE08_11745 PF00950 ABC 3 transport family IFE08_11750 PF00005 ABC transporter IFE08_11755 PF01297 Zinc-uptake complex component A periplasmic IFE08_11775 PF02146 Sir2 family IFE08_11780 PF01381 Helix-turn-helix IFE08_11790 PF03186 CobD/Cbib protein IFE08_11795 PF00365 Phosphofructokinase IFE08_11805 PF01751 Toprim domain IFE08_11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFE08_11805 PF00986 DNA gyrase B subunit, carboxyl terminus IFE08_11805 PF00204 DNA gyrase B IFE08_11815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IFE08_11825 PF01424 R3H domain IFE08_11825 PF14804 Jag N-terminus IFE08_11830 PF02096 60Kd inner membrane protein IFE08_11830 PF14849 YidC periplasmic domain IFE08_11835 PF01809 Putative membrane protein insertion efficiency factor IFE08_11840 PF00825 Ribonuclease P IFE08_11845 PF00468 Ribosomal protein L34 IFE08_11870 PF00005 ABC transporter IFE08_11870 PF03412 Peptidase C39 family IFE08_11870 PF00664 ABC transporter transmembrane region IFE08_11875 PF07670 Nucleoside recognition IFE08_11880 PF01048 Phosphorylase superfamily IFE08_11910 PF00990 Diguanylate cyclase, GGDEF domain IFE08_11910 PF17158 Membrane-associated sensor, integral membrane domain IFE08_11915 PF05598 Transposase domain (DUF772) IFE08_11915 PF01609 Transposase DDE domain IFE08_11925 PF00563 EAL domain IFE08_11925 PF00990 Diguanylate cyclase, GGDEF domain IFE08_11925 PF03707 Bacterial signalling protein N terminal repeat IFE08_11940 PF00753 Metallo-beta-lactamase superfamily IFE08_11940 PF12706 Beta-lactamase superfamily domain IFE08_11945 PF14842 FliG N-terminal domain IFE08_11945 PF01706 FliG C-terminal domain IFE08_11945 PF14841 FliG middle domain IFE08_11950 PF00460 Flagella basal body rod protein IFE08_11950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IFE08_11955 PF10135 Rod binding protein IFE08_11960 PF01565 FAD binding domain IFE08_11960 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IFE08_12005 PF00005 ABC transporter IFE08_12010 PF00570 HRDC domain IFE08_12010 PF00271 Helicase conserved C-terminal domain IFE08_12010 PF00270 DEAD/DEAH box helicase IFE08_12010 PF16124 RecQ zinc-binding IFE08_12010 PF09382 RQC domain IFE08_12015 PF00204 DNA gyrase B IFE08_12015 PF01751 Toprim domain IFE08_12015 PF00986 DNA gyrase B subunit, carboxyl terminus IFE08_12015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFE08_12020 PF00308 Bacterial dnaA protein IFE08_12020 PF11638 DnaA N-terminal domain IFE08_12020 PF08299 Bacterial dnaA protein helix-turn-helix IFE08_12035 PF01336 OB-fold nucleic acid binding domain IFE08_12035 PF00152 tRNA synthetases class II (D, K and N) IFE08_12040 PF00768 D-alanyl-D-alanine carboxypeptidase IFE08_12040 PF07943 Penicillin-binding protein 5, C-terminal domain IFE08_12045 PF02570 Precorrin-8X methylmutase IFE08_12055 PF02743 Cache domain IFE08_12055 PF00672 HAMP domain IFE08_12055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_12080 PF16916 Dimerisation domain of Zinc Transporter IFE08_12080 PF01545 Cation efflux family IFE08_12110 PF03023 Lipid II flippase MurJ IFE08_12115 PF03616 Sodium/glutamate symporter IFE08_12125 PF12671 Putative amidase domain IFE08_12140 PF01192 RNA polymerase Rpb6 IFE08_12145 PF08011 PD-(D/E)XK nuclease superfamily IFE08_12145 PF09820 Predicted AAA-ATPase IFE08_12160 PF00691 OmpA family IFE08_12165 PF05598 Transposase domain (DUF772) IFE08_12165 PF01609 Transposase DDE domain IFE08_12170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_12170 PF00672 HAMP domain IFE08_12170 PF12729 Four helix bundle sensory module for signal transduction IFE08_12175 PF01546 Peptidase family M20/M25/M40 IFE08_12175 PF07687 Peptidase dimerisation domain IFE08_12180 PF00849 RNA pseudouridylate synthase IFE08_12180 PF01479 S4 domain IFE08_12185 PF04079 Segregation and condensation complex subunit ScpB IFE08_12190 PF02616 Segregation and condensation protein ScpA IFE08_12205 PF00391 PEP-utilising enzyme, mobile domain IFE08_12205 PF02896 PEP-utilising enzyme, TIM barrel domain IFE08_12220 PF13519 von Willebrand factor type A domain IFE08_12225 PF18663 Pallilysin beta barrel domain IFE08_12230 PF00581 Rhodanese-like domain IFE08_12240 PF01032 FecCD transport family IFE08_12245 PF00005 ABC transporter IFE08_12285 PF02867 Ribonucleotide reductase, barrel domain IFE08_12285 PF00317 Ribonucleotide reductase, all-alpha domain IFE08_12285 PF03477 ATP cone domain IFE08_12290 PF01609 Transposase DDE domain IFE08_12290 PF05598 Transposase domain (DUF772) IFE08_12295 PF00266 Aminotransferase class-V IFE08_12300 PF01761 3-dehydroquinate synthase IFE08_12305 PF01048 Phosphorylase superfamily IFE08_12310 PF00571 CBS domain IFE08_12310 PF03471 Transporter associated domain IFE08_12310 PF01595 Cyclin M transmembrane N-terminal domain IFE08_12315 PF00571 CBS domain IFE08_12315 PF03471 Transporter associated domain IFE08_12315 PF01595 Cyclin M transmembrane N-terminal domain IFE08_12325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_12330 PF00005 ABC transporter IFE08_12330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_12335 PF00005 ABC transporter IFE08_12335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_12340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_12345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IFE08_12350 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_12350 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_12355 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_12380 PF00990 Diguanylate cyclase, GGDEF domain IFE08_12385 PF00990 Diguanylate cyclase, GGDEF domain IFE08_12410 PF01081 KDPG and KHG aldolase IFE08_12435 PF05598 Transposase domain (DUF772) IFE08_12435 PF01609 Transposase DDE domain IFE08_12440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_12440 PF00672 HAMP domain IFE08_12440 PF12729 Four helix bundle sensory module for signal transduction IFE08_12455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFE08_12455 PF00512 His Kinase A (phospho-acceptor) domain IFE08_12455 PF00072 Response regulator receiver domain IFE08_12455 PF00672 HAMP domain IFE08_12455 PF01627 Hpt domain IFE08_12455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IFE08_12460 PF00072 Response regulator receiver domain IFE08_12470 PF08241 Methyltransferase domain IFE08_12485 PF00753 Metallo-beta-lactamase superfamily IFE08_12495 PF00075 RNase H IFE08_12500 PF00793 DAHP synthetase I family IFE08_12505 PF02926 THUMP domain IFE08_12505 PF02568 Thiamine biosynthesis protein (ThiI) IFE08_12515 PF00005 ABC transporter IFE08_12535 PF00183 Hsp90 protein IFE08_12550 PF04542 Sigma-70 region 2 IFE08_12550 PF04539 Sigma-70 region 3 IFE08_12550 PF04545 Sigma-70, region 4 IFE08_12550 PF00140 Sigma-70 factor, region 1.2 IFE08_12550 PF03979 Sigma-70 factor, region 1.1 IFE08_12570 PF01812 5-formyltetrahydrofolate cyclo-ligase family IFE08_12575 PF00497 Bacterial extracellular solute-binding proteins, family 3 IFE08_12590 PF00080 Copper/zinc superoxide dismutase (SODC) IFE08_12600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IFE08_12600 PF07196 Flagellin hook IN motif IFE08_12605 PF00700 Bacterial flagellin C-terminal helical region IFE08_12605 PF07196 Flagellin hook IN motif IFE08_12605 PF00669 Bacterial flagellin N-terminal helical region IFE08_12610 PF02743 Cache domain IFE08_12610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_12610 PF00672 HAMP domain IFE08_12625 PF01026 TatD related DNase IFE08_12630 PF01207 Dihydrouridine synthase (Dus) IFE08_12635 PF08011 PD-(D/E)XK nuclease superfamily IFE08_12635 PF09820 Predicted AAA-ATPase IFE08_12640 PF00211 Adenylate and Guanylate cyclase catalytic domain IFE08_12645 PF00258 Flavodoxin IFE08_12655 PF02492 CobW/HypB/UreG, nucleotide-binding domain IFE08_12660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IFE08_12660 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFE08_12675 PF01066 CDP-alcohol phosphatidyltransferase IFE08_12680 PF00953 Glycosyl transferase family 4 IFE08_12685 PF00448 SRP54-type protein, GTPase domain IFE08_12690 PF10609 NUBPL iron-transfer P-loop NTPase IFE08_12700 PF04542 Sigma-70 region 2 IFE08_12700 PF04545 Sigma-70, region 4 IFE08_12700 PF04539 Sigma-70 region 3 IFE08_12730 PF00268 Ribonucleotide reductase, small chain IFE08_12735 PF01594 AI-2E family transporter IFE08_12740 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IFE08_12755 PF01791 DeoC/LacD family aldolase IFE08_12760 PF08011 PD-(D/E)XK nuclease superfamily IFE08_12760 PF09820 Predicted AAA-ATPase IFE08_12765 PF03009 Glycerophosphoryl diester phosphodiesterase family IFE08_12770 PF00156 Phosphoribosyl transferase domain IFE08_12775 PF00750 tRNA synthetases class I (R) IFE08_12775 PF05746 DALR anticodon binding domain IFE08_12775 PF03485 Arginyl tRNA synthetase N terminal domain IFE08_12780 PF17863 AAA lid domain IFE08_12780 PF07726 ATPase family associated with various cellular activities (AAA) IFE08_12835 PF01554 MatE IFE08_12840 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IFE08_12845 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IFE08_12845 PF14572 Phosphoribosyl synthetase-associated domain IFE08_12855 PF00813 FliP family IFE08_12865 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IFE08_12865 PF04509 CheC-like family IFE08_12870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IFE08_12870 PF02154 Flagellar motor switch protein FliM IFE08_12875 PF03748 Flagellar basal body-associated protein FliL IFE08_12880 PF00691 OmpA family IFE08_12880 PF13677 Membrane MotB of proton-channel complex MotA/MotB IFE08_12885 PF01618 MotA/TolQ/ExbB proton channel family IFE08_12895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IFE08_12895 PF07559 Flagellar basal body protein FlaE IFE08_12895 PF00460 Flagella basal body rod protein IFE08_12900 PF03963 Flagellar hook capping protein - N-terminal region IFE08_12910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFE08_12915 PF11760 Cobalamin synthesis G N-terminal IFE08_12915 PF11761 Cobalamin biosynthesis central region IFE08_12915 PF01890 Cobalamin synthesis G C-terminus IFE08_12930 PF00005 ABC transporter IFE08_12940 PF05656 Protein of unknown function (DUF805) IFE08_12955 PF12705 PD-(D/E)XK nuclease superfamily IFE08_12960 PF13361 UvrD-like helicase C-terminal domain IFE08_12960 PF00580 UvrD/REP helicase N-terminal domain IFE08_12960 PF12705 PD-(D/E)XK nuclease superfamily IFE08_12970 PF00005 ABC transporter IFE08_12975 PF00950 ABC 3 transport family IFE08_13000 PF05598 Transposase domain (DUF772) IFE08_13000 PF01609 Transposase DDE domain IFE08_13020 PF14492 Elongation Factor G, domain II IFE08_13020 PF03764 Elongation factor G, domain IV IFE08_13020 PF03144 Elongation factor Tu domain 2 IFE08_13020 PF00009 Elongation factor Tu GTP binding domain IFE08_13020 PF00679 Elongation factor G C-terminus IFE08_13050 PF02926 THUMP domain IFE08_13050 PF01170 Putative RNA methylase family UPF0020 IFE08_13065 PF01555 DNA methylase IFE08_13100 PF00005 ABC transporter IFE08_13135 PF00583 Acetyltransferase (GNAT) family IFE08_13160 PF01381 Helix-turn-helix IFE08_13215 PF00149 Calcineurin-like phosphoesterase IFE08_13215 PF02872 5'-nucleotidase, C-terminal domain IFE08_13225 PF08544 GHMP kinases C terminal IFE08_13225 PF00288 GHMP kinases N terminal domain IFE08_13225 PF10509 Galactokinase galactose-binding signature IFE08_13230 PF00342 Phosphoglucose isomerase IFE08_13235 PF01926 50S ribosome-binding GTPase IFE08_13245 PF13193 AMP-binding enzyme C-terminal domain IFE08_13245 PF00501 AMP-binding enzyme IFE08_13270 PF09820 Predicted AAA-ATPase IFE08_13270 PF08011 PD-(D/E)XK nuclease superfamily IFE08_13275 PF01409 tRNA synthetases class II core domain (F) IFE08_13285 PF07687 Peptidase dimerisation domain IFE08_13285 PF01546 Peptidase family M20/M25/M40 IFE08_13305 PF00005 ABC transporter IFE08_13335 PF09827 CRISPR associated protein Cas2 IFE08_13345 PF18470 Cas9 alpha-helical lobe domain IFE08_13345 PF18070 CRISPR-Cas9 PI domain IFE08_13345 PF18061 CRISPR-Cas9 WED domain IFE08_13345 PF13395 HNH endonuclease IFE08_13345 PF18541 RuvC endonuclease subdomain 3 IFE08_13350 PF05598 Transposase domain (DUF772) IFE08_13350 PF01609 Transposase DDE domain IFE08_13360 PF00664 ABC transporter transmembrane region IFE08_13360 PF00005 ABC transporter IFE08_13365 PF00664 ABC transporter transmembrane region IFE08_13365 PF00005 ABC transporter IFE08_13365 PF08021 Siderophore-interacting FAD-binding domain IFE08_13365 PF04954 Siderophore-interacting protein IFE08_13375 PF00005 ABC transporter IFE08_13385 PF12833 Helix-turn-helix domain IFE08_13385 PF02311 AraC-like ligand binding domain IFE08_13395 PF01420 Type I restriction modification DNA specificity domain IFE08_13405 PF02661 Fic/DOC family IFE08_13410 PF12161 HsdM N-terminal domain IFE08_13410 PF02384 N-6 DNA Methylase IFE08_13420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IFE08_13420 PF00512 His Kinase A (phospho-acceptor) domain IFE08_13440 PF04607 Region found in RelA / SpoT proteins IFE08_13460 PF00005 ABC transporter IFE08_13460 PF00664 ABC transporter transmembrane region IFE08_13475 PF08241 Methyltransferase domain IFE08_13480 PF01032 FecCD transport family IFE08_13485 PF00005 ABC transporter IFE08_13495 PF01497 Periplasmic binding protein IFE08_13505 PF00005 ABC transporter IFE08_13505 PF00664 ABC transporter transmembrane region IFE08_13510 PF04191 Phospholipid methyltransferase IFE08_13515 PF08003 Protein of unknown function (DUF1698) IFE08_13520 PF00440 Bacterial regulatory proteins, tetR family IFE08_13520 PF08361 MAATS-type transcriptional repressor, C-terminal region IFE08_13535 PF00255 Glutathione peroxidase IFE08_13545 PF05598 Transposase domain (DUF772) IFE08_13545 PF01609 Transposase DDE domain IFE08_13550 PF00672 HAMP domain IFE08_13550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_13555 PF12419 SNF2 Helicase protein IFE08_13555 PF00271 Helicase conserved C-terminal domain IFE08_13555 PF00176 SNF2 family N-terminal domain IFE08_13565 PF02561 Flagellar protein FliS IFE08_13570 PF04024 PspC domain IFE08_13585 PF01963 TraB family IFE08_13595 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system IFE08_13605 PF01609 Transposase DDE domain IFE08_13605 PF05598 Transposase domain (DUF772) IFE08_13610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IFE08_13610 PF07992 Pyridine nucleotide-disulphide oxidoreductase IFE08_13615 PF00274 Fructose-bisphosphate aldolase class-I IFE08_13620 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_13625 PF00528 Binding-protein-dependent transport system inner membrane component IFE08_13625 PF12911 N-terminal TM domain of oligopeptide transport permease C IFE08_13630 PF00005 ABC transporter IFE08_13630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_13635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IFE08_13635 PF00005 ABC transporter IFE08_13640 PF00271 Helicase conserved C-terminal domain IFE08_13640 PF00270 DEAD/DEAH box helicase IFE08_13640 PF17191 RecG wedge domain IFE08_13645 PF01048 Phosphorylase superfamily IFE08_13655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IFE08_13670 PF00155 Aminotransferase class I and II IFE08_13675 PF02971 Formiminotransferase domain IFE08_13675 PF07837 Formiminotransferase domain, N-terminal subdomain IFE08_13680 PF01969 Protein of unknown function DUF111 IFE08_13685 PF08543 Phosphomethylpyrimidine kinase IFE08_13690 PF01926 50S ribosome-binding GTPase IFE08_13690 PF13167 GTP-binding GTPase N-terminal IFE08_13690 PF16360 GTP-binding GTPase Middle Region IFE08_13700 PF00326 Prolyl oligopeptidase family IFE08_13700 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IFE08_13705 PF00210 Ferritin-like domain IFE08_13710 PF07690 Major Facilitator Superfamily IFE08_13715 PF07687 Peptidase dimerisation domain IFE08_13715 PF01546 Peptidase family M20/M25/M40 IFE08_13725 PF03030 Inorganic H+ pyrophosphatase IFE08_13735 PF02127 Aminopeptidase I zinc metalloprotease (M18) IFE08_13740 PF13932 GidA associated domain IFE08_13740 PF01134 Glucose inhibited division protein A IFE08_13745 PF07685 CobB/CobQ-like glutamine amidotransferase domain IFE08_13755 PF02673 Bacitracin resistance protein BacA IFE08_13760 PF01580 FtsK/SpoIIIE family IFE08_13760 PF09397 Ftsk gamma domain IFE08_13760 PF17854 FtsK alpha domain IFE08_13765 PF00730 HhH-GPD superfamily base excision DNA repair protein IFE08_13770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IFE08_13770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IFE08_13770 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IFE08_13770 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IFE08_13775 PF00005 ABC transporter IFE08_13780 PF03412 Peptidase C39 family IFE08_13780 PF00005 ABC transporter IFE08_13780 PF00664 ABC transporter transmembrane region IFE08_13785 PF00005 ABC transporter IFE08_13785 PF00664 ABC transporter transmembrane region IFE08_13790 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IFE08_13790 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IFE08_13790 PF10371 Domain of unknown function IFE08_13790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IFE08_13790 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IFE08_13795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IFE08_13795 PF02743 Cache domain IFE08_13795 PF00672 HAMP domain IFE08_13805 PF03824 High-affinity nickel-transport protein IFE08_13820 PF04468 PSP1 C-terminal conserved region IFE08_13825 PF03885 Protein of unknown function (DUF327) IFE08_13835 PF04225 Opacity-associated protein A LysM-like domain IFE08_13835 PF01551 Peptidase family M23 IFE08_13840 PF00133 tRNA synthetases class I (I, L, M and V) IFE08_13840 PF08264 Anticodon-binding domain of tRNA IFE08_13850 PF00005 ABC transporter IFE08_13865 PF02547 Queuosine biosynthesis protein IFE08_13875 PF01430 Hsp33 protein IFE08_13885 PF00962 Adenosine/AMP deaminase IFE08_13900 PF13649 Methyltransferase domain IFE08_13905 PF02463 RecF/RecN/SMC N terminal domain IFE08_13910 PF00712 DNA polymerase III beta subunit, N-terminal domain IFE08_13910 PF02767 DNA polymerase III beta subunit, central domain IFE08_13910 PF02768 DNA polymerase III beta subunit, C-terminal domain IFE08_13915 PF01226 Formate/nitrite transporter