locus-tag class description DYQ05_00005 IPR024633 DnaA N-terminal domain DYQ05_00005 IPR001957 Chromosomal replication control, initiator DnaA DYQ05_00005 IPR020591 Chromosomal replication control, initiator DnaA-like DYQ05_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site DYQ05_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_00005 IPR013317 Chromosomal replication initiator protein DnaA DYQ05_00005 IPR010921 Trp repressor/replication initiator DYQ05_00005 IPR038454 DnaA, N-terminal domain superfamily DYQ05_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal DYQ05_00005 IPR003593 AAA+ ATPase domain DYQ05_00015 IPR003876 Arginine deiminase DYQ05_00020 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DYQ05_00020 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DYQ05_00020 IPR006195 Aminoacyl-tRNA synthetase, class II DYQ05_00020 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DYQ05_00020 IPR012340 Nucleic acid-binding, OB-fold DYQ05_00020 IPR004522 Asparagine-tRNA ligase DYQ05_00025 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DYQ05_00025 IPR012338 Beta-lactamase/transpeptidase-like DYQ05_00025 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DYQ05_00025 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DYQ05_00025 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DYQ05_00025 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DYQ05_00030 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC DYQ05_00030 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily DYQ05_00040 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_00040 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_00040 IPR003660 HAMP domain DYQ05_00040 IPR033479 Double Cache domain 1 DYQ05_00065 IPR036837 Cation efflux protein, cytoplasmic domain superfamily DYQ05_00065 IPR027470 Cation efflux protein, cytoplasmic domain DYQ05_00065 IPR002524 Cation efflux protein DYQ05_00065 IPR027469 Cation efflux transmembrane domain superfamily DYQ05_00095 IPR004268 Peptidoglycan biosynthesis protein MurJ DYQ05_00100 IPR004445 Sodium/glutamate symport carrier protein GltS DYQ05_00110 IPR024301 Putative amidase domain DYQ05_00120 IPR039657 Dimethylallyltransferase DYQ05_00120 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_00120 IPR018022 IPP transferase DYQ05_00125 IPR006110 RNA polymerase, subunit omega/K/RPB6 DYQ05_00125 IPR036161 RPB6/omega subunit-like superfamily DYQ05_00130 IPR018631 AAA-ATPase-like domain DYQ05_00130 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_00145 IPR006690 Outer membrane protein, OmpA-like, conserved site DYQ05_00145 IPR006664 Outer membrane protein, bacterial DYQ05_00145 IPR006665 OmpA-like domain DYQ05_00145 IPR036737 OmpA-like domain superfamily DYQ05_00150 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_00150 IPR004090 Chemotaxis methyl-accepting receptor DYQ05_00150 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DYQ05_00150 IPR000727 Target SNARE coiled-coil homology domain DYQ05_00150 IPR003660 HAMP domain DYQ05_00155 IPR011650 Peptidase M20, dimerisation domain DYQ05_00155 IPR036264 Bacterial exopeptidase dimerisation domain DYQ05_00155 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria DYQ05_00155 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DYQ05_00155 IPR002933 Peptidase M20 DYQ05_00160 IPR020103 Pseudouridine synthase, catalytic domain superfamily DYQ05_00160 IPR002942 RNA-binding S4 domain DYQ05_00160 IPR036986 RNA-binding S4 domain superfamily DYQ05_00160 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DYQ05_00160 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DYQ05_00160 IPR006145 Pseudouridine synthase, RsuA/RluA DYQ05_00160 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DYQ05_00165 IPR005234 Chromosome segregation/condensation protein ScpB DYQ05_00165 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_00165 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_00170 IPR003768 Segregation and condensation protein A DYQ05_00185 IPR000121 PEP-utilising enzyme, C-terminal DYQ05_00185 IPR018274 PEP-utilising enzyme, active site DYQ05_00185 IPR023151 PEP-utilising enzyme, conserved site DYQ05_00185 IPR036637 Phosphohistidine domain superfamily DYQ05_00185 IPR010121 Pyruvate, phosphate dikinase DYQ05_00185 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DYQ05_00185 IPR040442 Pyruvate kinase-like domain superfamily DYQ05_00185 IPR013815 ATP-grasp fold, subdomain 1 DYQ05_00185 IPR008279 PEP-utilising enzyme, mobile domain DYQ05_00200 IPR036465 von Willebrand factor A-like domain superfamily DYQ05_00200 IPR002035 von Willebrand factor, type A DYQ05_00210 IPR036873 Rhodanese-like domain superfamily DYQ05_00210 IPR001763 Rhodanese-like domain DYQ05_00220 IPR000522 ABC transporter, permease protein, BtuC-like DYQ05_00220 IPR037294 ABC transporter, BtuC-like DYQ05_00225 IPR003593 AAA+ ATPase domain DYQ05_00225 IPR003439 ABC transporter-like DYQ05_00225 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_00225 IPR017871 ABC transporter, conserved site DYQ05_00250 IPR029044 Nucleotide-diphospho-sugar transferases DYQ05_00250 IPR025877 MobA-like NTP transferase DYQ05_00250 IPR017189 CTP:phosphocholine cytidylyltransferase DYQ05_00255 IPR018093 BCCT transporter, conserved site DYQ05_00255 IPR000060 BCCT transporter family DYQ05_00255 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT DYQ05_00265 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta DYQ05_00265 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta DYQ05_00270 IPR000060 BCCT transporter family DYQ05_00270 IPR018093 BCCT transporter, conserved site DYQ05_00275 IPR037294 ABC transporter, BtuC-like DYQ05_00275 IPR000522 ABC transporter, permease protein, BtuC-like DYQ05_00285 IPR029033 Histidine phosphatase superfamily DYQ05_00285 IPR013078 Histidine phosphatase superfamily, clade-1 DYQ05_00285 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DYQ05_00285 IPR005952 Phosphoglycerate mutase 1 DYQ05_00300 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain DYQ05_00300 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily DYQ05_00310 IPR002528 Multi antimicrobial extrusion protein DYQ05_00345 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain DYQ05_00345 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily DYQ05_00345 IPR011324 Cytotoxic necrotizing factor-like, catalytic DYQ05_00345 IPR022385 Rhs repeat-associated core DYQ05_00345 IPR041508 Toxin complex C-like repeat DYQ05_00610 IPR003593 AAA+ ATPase domain DYQ05_00610 IPR003439 ABC transporter-like DYQ05_00610 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_00615 IPR003593 AAA+ ATPase domain DYQ05_00615 IPR003439 ABC transporter-like DYQ05_00615 IPR017871 ABC transporter, conserved site DYQ05_00615 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_00615 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_00620 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DYQ05_00620 IPR035906 MetI-like superfamily DYQ05_00620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_00625 IPR035906 MetI-like superfamily DYQ05_00625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_00635 IPR020449 Transcription regulator HTH, AraC- type DYQ05_00635 IPR014710 RmlC-like jelly roll fold DYQ05_00635 IPR018060 DNA binding HTH domain, AraC-type DYQ05_00635 IPR009057 Homeobox-like domain superfamily DYQ05_00635 IPR003313 AraC-type arabinose-binding/dimerisation domain DYQ05_00635 IPR018062 HTH domain AraC-type, conserved site DYQ05_00635 IPR037923 Transcription regulator HTH-like DYQ05_00640 IPR033479 Double Cache domain 1 DYQ05_00640 IPR003660 HAMP domain DYQ05_00640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_00640 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_00640 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DYQ05_00690 IPR025501 ATP binding protein MinD DYQ05_00690 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_00690 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DYQ05_00700 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt DYQ05_00730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_00730 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type DYQ05_00745 IPR038728 Uncharacterized membrane protein YkvI DYQ05_00755 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta DYQ05_00755 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta DYQ05_00760 IPR033479 Double Cache domain 1 DYQ05_00760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_00760 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_00760 IPR003660 HAMP domain DYQ05_00765 IPR028299 ClpA/B, conserved site 2 DYQ05_00765 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_00765 IPR003593 AAA+ ATPase domain DYQ05_00765 IPR003959 ATPase, AAA-type, core DYQ05_00765 IPR041546 ClpA/ClpB, AAA lid domain DYQ05_00765 IPR019489 Clp ATPase, C-terminal DYQ05_00765 IPR018368 ClpA/B, conserved site 1 DYQ05_00765 IPR004176 Clp, N-terminal DYQ05_00765 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA DYQ05_00765 IPR001270 ClpA/B family DYQ05_00765 IPR036628 Clp, N-terminal domain superfamily DYQ05_00770 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DYQ05_00770 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DYQ05_00770 IPR003769 Adaptor protein ClpS, core DYQ05_00780 IPR003828 Epoxyqueuosine reductase QueH DYQ05_00810 IPR008104 Macrophage infectivity potentiator DYQ05_00810 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DYQ05_00810 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DYQ05_00810 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DYQ05_00815 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DYQ05_00815 IPR008104 Macrophage infectivity potentiator DYQ05_00815 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DYQ05_00815 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DYQ05_00820 IPR018079 Ribosomal protein S4, conserved site DYQ05_00820 IPR036986 RNA-binding S4 domain superfamily DYQ05_00820 IPR002942 RNA-binding S4 domain DYQ05_00820 IPR001912 Ribosomal protein S4/S9, N-terminal DYQ05_00820 IPR022801 Ribosomal protein S4/S9 DYQ05_00820 IPR005709 Ribosomal protein S4, bacterial-type DYQ05_00835 IPR020818 GroES chaperonin family DYQ05_00835 IPR037124 GroES chaperonin superfamily DYQ05_00835 IPR011032 GroES-like superfamily DYQ05_00835 IPR018369 Chaperonin GroES, conserved site DYQ05_00840 IPR012760 RNA polymerase sigma factor RpoD, C-terminal DYQ05_00840 IPR028630 RNA polymerase sigma factor RpoD DYQ05_00840 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_00840 IPR009042 RNA polymerase sigma-70 region 1.2 DYQ05_00840 IPR013324 RNA polymerase sigma factor, region 3/4-like DYQ05_00840 IPR013325 RNA polymerase sigma factor, region 2 DYQ05_00840 IPR042189 Sigma-70 factor, region 1.1 superfamily DYQ05_00840 IPR007127 RNA polymerase sigma factor 70, region 1.1 DYQ05_00840 IPR007630 RNA polymerase sigma-70 region 4 DYQ05_00840 IPR000943 RNA polymerase sigma-70 DYQ05_00840 IPR007627 RNA polymerase sigma-70 region 2 DYQ05_00840 IPR014284 RNA polymerase sigma-70 like domain DYQ05_00840 IPR007624 RNA polymerase sigma-70 region 3 DYQ05_00845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_00845 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal DYQ05_00845 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DYQ05_00845 IPR012094 tRNA(Ile)-lysidine synthase DYQ05_00845 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal DYQ05_00850 IPR011990 Tetratricopeptide-like helical domain superfamily DYQ05_00855 IPR001940 Peptidase S1C DYQ05_00855 IPR001478 PDZ domain DYQ05_00855 IPR036034 PDZ superfamily DYQ05_00855 IPR011782 Peptidase S1C, Do DYQ05_00855 IPR009003 Peptidase S1, PA clan DYQ05_00860 IPR024981 Domain of unknown function DUF3887 DYQ05_00860 IPR029058 Alpha/Beta hydrolase fold DYQ05_00860 IPR022742 Serine aminopeptidase, S33 DYQ05_00865 IPR000683 Oxidoreductase, N-terminal DYQ05_00865 IPR036291 NAD(P)-binding domain superfamily DYQ05_00865 IPR004104 Oxidoreductase, C-terminal DYQ05_00880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_00880 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DYQ05_00880 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_00880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_00885 IPR025420 Domain of unknown function DUF4143 DYQ05_00885 IPR041682 AAA domain, group 14 DYQ05_00890 IPR011004 Trimeric LpxA-like superfamily DYQ05_00890 IPR001451 Hexapeptide repeat DYQ05_00900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_00900 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DYQ05_00900 IPR036291 NAD(P)-binding domain superfamily DYQ05_00905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_00905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_00905 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_00905 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DYQ05_00925 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like DYQ05_00925 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain DYQ05_00925 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing DYQ05_00930 IPR037022 Formyl transferase, C-terminal domain superfamily DYQ05_00930 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain DYQ05_00930 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DYQ05_00930 IPR011034 Formyl transferase-like, C-terminal domain superfamily DYQ05_00930 IPR036477 Formyl transferase, N-terminal domain superfamily DYQ05_00930 IPR002376 Formyl transferase, N-terminal DYQ05_00930 IPR005793 Formyl transferase, C-terminal DYQ05_00930 IPR005794 Methionyl-tRNA formyltransferase DYQ05_00950 IPR020007 N-acetylneuraminate synthase DYQ05_00950 IPR013974 SAF domain DYQ05_00950 IPR013132 N-acetylneuraminic acid synthase, N-terminal DYQ05_00950 IPR013785 Aldolase-type TIM barrel DYQ05_00950 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily DYQ05_00950 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal DYQ05_00955 IPR003329 Acylneuraminate cytidylyltransferase DYQ05_00955 IPR029044 Nucleotide-diphospho-sugar transferases DYQ05_00955 IPR020039 Pseudaminic acid cytidylyltransferase DYQ05_00960 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria DYQ05_00960 IPR005835 Nucleotidyl transferase domain DYQ05_00960 IPR029044 Nucleotide-diphospho-sugar transferases DYQ05_00985 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like DYQ05_00985 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain DYQ05_00990 IPR036291 NAD(P)-binding domain superfamily DYQ05_00990 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DYQ05_00990 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DYQ05_00990 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DYQ05_00990 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DYQ05_00990 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DYQ05_00990 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DYQ05_00990 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase DYQ05_01005 IPR007074 LicD family DYQ05_01015 IPR002656 Acyltransferase 3 DYQ05_01025 IPR005835 Nucleotidyl transferase domain DYQ05_01025 IPR029044 Nucleotide-diphospho-sugar transferases DYQ05_01025 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DYQ05_01030 IPR014710 RmlC-like jelly roll fold DYQ05_01030 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related DYQ05_01030 IPR011051 RmlC-like cupin domain superfamily DYQ05_01035 IPR036291 NAD(P)-binding domain superfamily DYQ05_01035 IPR005913 dTDP-4-dehydrorhamnose reductase family DYQ05_01035 IPR029903 RmlD-like substrate binding domain DYQ05_01040 IPR005888 dTDP-glucose 4,6-dehydratase DYQ05_01040 IPR036291 NAD(P)-binding domain superfamily DYQ05_01040 IPR016040 NAD(P)-binding domain DYQ05_01050 IPR005130 Serine dehydratase-like, alpha subunit DYQ05_01050 IPR004642 Serine dehydratase, alpha subunit DYQ05_01055 IPR005131 Serine dehydratase beta chain DYQ05_01055 IPR029009 Allosteric substrate binding domain superfamily DYQ05_01055 IPR002912 ACT domain DYQ05_01055 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit DYQ05_01060 IPR004685 Branched-chain amino acid transport system II carrier protein DYQ05_01075 IPR005839 Methylthiotransferase DYQ05_01075 IPR013848 Methylthiotransferase, N-terminal DYQ05_01075 IPR006467 MiaB-like tRNA modifying enzyme DYQ05_01075 IPR007197 Radical SAM DYQ05_01075 IPR023404 Radical SAM, alpha/beta horseshoe DYQ05_01075 IPR006638 Elp3/MiaB/NifB DYQ05_01075 IPR038135 Methylthiotransferase, N-terminal domain superfamily DYQ05_01075 IPR020612 Methylthiotransferase, conserved site DYQ05_01145 IPR025824 OB-fold nucleic acid binding domain DYQ05_01145 IPR020579 Exonuclease VII, large subunit, C-terminal DYQ05_01145 IPR003753 Exonuclease VII, large subunit DYQ05_01155 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01155 IPR015862 ABC transporter, galactose import, MglA DYQ05_01155 IPR017871 ABC transporter, conserved site DYQ05_01155 IPR003439 ABC transporter-like DYQ05_01155 IPR003593 AAA+ ATPase domain DYQ05_01160 IPR004679 2-hydroxycarboxylate transporter DYQ05_01160 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes DYQ05_01165 IPR028082 Periplasmic binding protein-like I DYQ05_01165 IPR025997 Periplasmic binding protein DYQ05_01165 IPR040740 MglB-2, periplasmic binding protein domain DYQ05_01170 IPR026045 Ferric binding protein DYQ05_01175 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA DYQ05_01175 IPR001296 Glycosyl transferase, family 1 DYQ05_01175 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DYQ05_01180 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA DYQ05_01180 IPR017871 ABC transporter, conserved site DYQ05_01180 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01180 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit DYQ05_01180 IPR013611 Transport-associated OB, type 2 DYQ05_01180 IPR003439 ABC transporter-like DYQ05_01180 IPR008995 Molybdate/tungstate binding, C-terminal DYQ05_01180 IPR003593 AAA+ ATPase domain DYQ05_01185 IPR035906 MetI-like superfamily DYQ05_01185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_01190 IPR020809 Enolase, conserved site DYQ05_01190 IPR029017 Enolase-like, N-terminal DYQ05_01190 IPR036849 Enolase-like, C-terminal domain superfamily DYQ05_01190 IPR020811 Enolase, N-terminal DYQ05_01190 IPR000941 Enolase DYQ05_01190 IPR020810 Enolase, C-terminal TIM barrel domain DYQ05_01200 IPR035906 MetI-like superfamily DYQ05_01200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_01205 IPR003439 ABC transporter-like DYQ05_01205 IPR003593 AAA+ ATPase domain DYQ05_01205 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01205 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB DYQ05_01205 IPR017871 ABC transporter, conserved site DYQ05_01250 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DYQ05_01250 IPR036291 NAD(P)-binding domain superfamily DYQ05_01250 IPR006037 Regulator of K+ conductance, C-terminal DYQ05_01250 IPR003148 Regulator of K+ conductance, N-terminal DYQ05_01255 IPR005743 DNA gyrase, subunit A DYQ05_01255 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat DYQ05_01255 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DYQ05_01255 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DYQ05_01255 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DYQ05_01255 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DYQ05_01255 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DYQ05_01260 IPR017926 Glutamine amidotransferase DYQ05_01260 IPR004468 CTP synthase DYQ05_01260 IPR017456 CTP synthase, N-terminal DYQ05_01260 IPR033828 CTP synthase GATase domain DYQ05_01260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01260 IPR029062 Class I glutamine amidotransferase-like DYQ05_01275 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DYQ05_01275 IPR001303 Class II aldolase/adducin N-terminal DYQ05_01280 IPR037522 HD-GYP domain DYQ05_01280 IPR003607 HD/PDEase domain DYQ05_01280 IPR001789 Signal transduction response regulator, receiver domain DYQ05_01280 IPR011006 CheY-like superfamily DYQ05_01285 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_01285 IPR003783 Regulatory protein RecX DYQ05_01290 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_01290 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_01290 IPR000754 Ribosomal protein S9 DYQ05_01290 IPR023035 Ribosomal protein S9, bacterial/plastid DYQ05_01290 IPR020574 Ribosomal protein S9, conserved site DYQ05_01295 IPR036899 Ribosomal protein L13 superfamily DYQ05_01295 IPR005823 Ribosomal protein L13, bacterial-type DYQ05_01295 IPR005822 Ribosomal protein L13 DYQ05_01295 IPR023563 Ribosomal protein L13, conserved site DYQ05_01305 IPR026856 Sialidase family DYQ05_01305 IPR000421 Coagulation factor 5/8 C-terminal domain DYQ05_01305 IPR036278 Sialidase superfamily DYQ05_01305 IPR014756 Immunoglobulin E-set DYQ05_01305 IPR018905 Alpha-galactosidase, NEW3 domain DYQ05_01305 IPR011040 Sialidase DYQ05_01305 IPR013783 Immunoglobulin-like fold DYQ05_01305 IPR006311 Twin-arginine translocation pathway, signal sequence DYQ05_01305 IPR008979 Galactose-binding-like domain superfamily DYQ05_01315 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_01315 IPR033479 Double Cache domain 1 DYQ05_01315 IPR003660 HAMP domain DYQ05_01315 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_01325 IPR004681 TRAP transporter large membrane protein DctM DYQ05_01325 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DYQ05_01335 IPR031823 TRAP transporter T-component DYQ05_01335 IPR038537 TatT superfamily DYQ05_01350 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily DYQ05_01350 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding DYQ05_01355 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_01355 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_01355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01355 IPR017871 ABC transporter, conserved site DYQ05_01355 IPR039421 Type I protein exporter DYQ05_01355 IPR003593 AAA+ ATPase domain DYQ05_01355 IPR003439 ABC transporter-like DYQ05_01360 IPR003439 ABC transporter-like DYQ05_01360 IPR039421 Type I protein exporter DYQ05_01360 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01360 IPR017871 ABC transporter, conserved site DYQ05_01360 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_01360 IPR003593 AAA+ ATPase domain DYQ05_01360 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_01365 IPR003593 AAA+ ATPase domain DYQ05_01365 IPR003439 ABC transporter-like DYQ05_01365 IPR017871 ABC transporter, conserved site DYQ05_01365 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01435 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter DYQ05_01435 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria DYQ05_01435 IPR006059 Bacterial extracellular solute-binding protein DYQ05_01445 IPR013611 Transport-associated OB, type 2 DYQ05_01445 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01445 IPR008995 Molybdate/tungstate binding, C-terminal DYQ05_01445 IPR015853 ABC transporter, ferric cation import, FbpC DYQ05_01445 IPR017871 ABC transporter, conserved site DYQ05_01445 IPR003439 ABC transporter-like DYQ05_01445 IPR003593 AAA+ ATPase domain DYQ05_01465 IPR003593 AAA+ ATPase domain DYQ05_01465 IPR017871 ABC transporter, conserved site DYQ05_01465 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01465 IPR003439 ABC transporter-like DYQ05_01470 IPR003784 BioY protein DYQ05_01485 IPR005990 Inosine-5'-monophosphate dehydrogenase DYQ05_01485 IPR013785 Aldolase-type TIM barrel DYQ05_01485 IPR000644 CBS domain DYQ05_01485 IPR015875 IMP dehydrogenase / GMP reductase, conserved site DYQ05_01485 IPR001093 IMP dehydrogenase/GMP reductase DYQ05_01500 IPR000816 Peptidase C15, pyroglutamyl peptidase I DYQ05_01500 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like DYQ05_01500 IPR029762 Pyroglutamyl peptidase I, bacterial-type DYQ05_01500 IPR033694 Pyroglutamyl peptidase I, Cys active site DYQ05_01500 IPR033693 Pyroglutamyl peptidase I, Glu active site DYQ05_01500 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily DYQ05_01510 IPR036412 HAD-like superfamily DYQ05_01510 IPR006439 HAD hydrolase, subfamily IA DYQ05_01510 IPR041492 Haloacid dehalogenase-like hydrolase DYQ05_01510 IPR023214 HAD superfamily DYQ05_01510 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DYQ05_01510 IPR006328 L-2-Haloacid dehalogenase DYQ05_01520 IPR042095 Sulfatase-modifying factor enzyme superfamily DYQ05_01520 IPR005532 Sulfatase-modifying factor enzyme DYQ05_01520 IPR016187 C-type lectin fold DYQ05_01525 IPR001789 Signal transduction response regulator, receiver domain DYQ05_01525 IPR000792 Transcription regulator LuxR, C-terminal DYQ05_01525 IPR011006 CheY-like superfamily DYQ05_01525 IPR016032 Signal transduction response regulator, C-terminal effector DYQ05_01530 IPR036291 NAD(P)-binding domain superfamily DYQ05_01530 IPR003148 Regulator of K+ conductance, N-terminal DYQ05_01530 IPR006037 Regulator of K+ conductance, C-terminal DYQ05_01530 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DYQ05_01530 IPR006036 Potassium uptake protein TrkA DYQ05_01535 IPR004772 TrkH potassium transport family DYQ05_01535 IPR003445 Cation transporter DYQ05_01565 IPR036291 NAD(P)-binding domain superfamily DYQ05_01565 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DYQ05_01565 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DYQ05_01565 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal DYQ05_01565 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal DYQ05_01565 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent DYQ05_01585 IPR013822 Signal recognition particle SRP54, helical bundle DYQ05_01585 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DYQ05_01585 IPR004125 Signal recognition particle, SRP54 subunit, M-domain DYQ05_01585 IPR004780 Signal recognition particle protein DYQ05_01585 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily DYQ05_01585 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01585 IPR003593 AAA+ ATPase domain DYQ05_01585 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DYQ05_01585 IPR022941 Signal recognition particle, SRP54 subunit DYQ05_01595 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DYQ05_01595 IPR039697 Iron-type alcohol dehydrogenase-like DYQ05_01595 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DYQ05_01605 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01605 IPR039430 Thymidylate kinase-like domain DYQ05_01605 IPR018094 Thymidylate kinase DYQ05_01605 IPR018095 Thymidylate kinase, conserved site DYQ05_01615 IPR036291 NAD(P)-binding domain superfamily DYQ05_01615 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DYQ05_01615 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DYQ05_01615 IPR003710 Ketopantoate reductase ApbA/PanE DYQ05_01615 IPR013752 Ketopantoate reductase, C-terminal domain DYQ05_01615 IPR013332 Ketopantoate reductase, N-terminal domain DYQ05_01630 IPR023707 Outer membrane protein assembly factor BamA DYQ05_01630 IPR034746 POTRA domain DYQ05_01630 IPR000184 Bacterial surface antigen (D15) DYQ05_01630 IPR010827 POTRA domain, BamA/TamA-like DYQ05_01630 IPR039910 Surface antigen D15-like DYQ05_01640 IPR036678 MutS, connector domain superfamily DYQ05_01640 IPR007860 DNA mismatch repair protein MutS, connector domain DYQ05_01640 IPR005748 DNA mismatch repair protein MutS DYQ05_01640 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01640 IPR007695 DNA mismatch repair protein MutS-like, N-terminal DYQ05_01640 IPR000432 DNA mismatch repair protein MutS, C-terminal DYQ05_01640 IPR007861 DNA mismatch repair protein MutS, clamp DYQ05_01640 IPR017261 DNA mismatch repair protein MutS/MSH DYQ05_01640 IPR007696 DNA mismatch repair protein MutS, core DYQ05_01640 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DYQ05_01640 IPR016151 DNA mismatch repair protein MutS, N-terminal DYQ05_01650 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYQ05_01650 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta DYQ05_01650 IPR016039 Thiolase-like DYQ05_01655 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit DYQ05_01655 IPR003664 Fatty acid synthesis PlsX protein DYQ05_01675 IPR026669 Arsenite methyltransferase-like DYQ05_01675 IPR025714 Methyltransferase domain DYQ05_01675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_01690 IPR005362 Uncharacterised protein family UPF0164 DYQ05_01730 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01730 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_01730 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_01730 IPR017871 ABC transporter, conserved site DYQ05_01730 IPR003439 ABC transporter-like DYQ05_01730 IPR003593 AAA+ ATPase domain DYQ05_01730 IPR039421 Type I protein exporter DYQ05_01745 IPR004722 Dihydroorotase DYQ05_01745 IPR011059 Metal-dependent hydrolase, composite domain superfamily DYQ05_01745 IPR002195 Dihydroorotase, conserved site DYQ05_01745 IPR006680 Amidohydrolase-related DYQ05_01745 IPR032466 Metal-dependent hydrolase DYQ05_01750 IPR008302 Uncharacterised conserved protein UCP016719 DYQ05_01755 IPR012338 Beta-lactamase/transpeptidase-like DYQ05_01755 IPR001466 Beta-lactamase-related DYQ05_01770 IPR002197 DNA binding HTH domain, Fis-type DYQ05_01770 IPR025944 Sigma-54 interaction domain, conserved site DYQ05_01770 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DYQ05_01770 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DYQ05_01770 IPR003593 AAA+ ATPase domain DYQ05_01770 IPR009057 Homeobox-like domain superfamily DYQ05_01770 IPR002078 RNA polymerase sigma factor 54 interaction domain DYQ05_01770 IPR013767 PAS fold DYQ05_01770 IPR035965 PAS domain superfamily DYQ05_01770 IPR000014 PAS domain DYQ05_01770 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01770 IPR036291 NAD(P)-binding domain superfamily DYQ05_01785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01785 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 DYQ05_01785 IPR017871 ABC transporter, conserved site DYQ05_01785 IPR003439 ABC transporter-like DYQ05_01785 IPR003593 AAA+ ATPase domain DYQ05_01785 IPR015856 ABC transporter, CbiO/EcfA subunit DYQ05_01805 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DYQ05_01805 IPR011640 Ferrous iron transport protein B, C-terminal DYQ05_01805 IPR007167 Ferrous iron transporter FeoA domain DYQ05_01805 IPR003373 Ferrous iron transport protein B DYQ05_01805 IPR038157 Ferrous iron transporter, core domain DYQ05_01805 IPR041069 FeoB, cytosolic helical domain DYQ05_01805 IPR008988 Transcriptional repressor, C-terminal DYQ05_01805 IPR005225 Small GTP-binding protein domain DYQ05_01805 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01805 IPR006073 GTP binding domain DYQ05_01805 IPR030389 FeoB-type guanine nucleotide-binding (G) domain DYQ05_01840 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial DYQ05_01840 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_01840 IPR001650 Helicase, C-terminal DYQ05_01840 IPR010997 HRDC-like superfamily DYQ05_01840 IPR002121 HRDC domain DYQ05_01840 IPR004589 DNA helicase, ATP-dependent, RecQ type DYQ05_01840 IPR011545 DEAD/DEAH box helicase domain DYQ05_01840 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DYQ05_01840 IPR018982 RQC domain DYQ05_01840 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_01840 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01870 IPR006179 5'-Nucleotidase/apyrase DYQ05_01870 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DYQ05_01870 IPR008334 5'-Nucleotidase, C-terminal DYQ05_01870 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DYQ05_01870 IPR029052 Metallo-dependent phosphatase-like DYQ05_01885 IPR001608 Alanine racemase, N-terminal DYQ05_01885 IPR011078 Pyridoxal phosphate homeostasis protein DYQ05_01885 IPR029066 PLP-binding barrel DYQ05_01895 IPR012340 Nucleic acid-binding, OB-fold DYQ05_01895 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DYQ05_01895 IPR000085 Bacterial DNA recombination protein RuvA DYQ05_01895 IPR010994 RuvA domain 2-like DYQ05_01895 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial DYQ05_01900 IPR012337 Ribonuclease H-like superfamily DYQ05_01900 IPR002176 Crossover junction endodeoxyribonuclease RuvC DYQ05_01900 IPR036397 Ribonuclease H superfamily DYQ05_01915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_01915 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DYQ05_01915 IPR029062 Class I glutamine amidotransferase-like DYQ05_01915 IPR017926 Glutamine amidotransferase DYQ05_01915 IPR001674 GMP synthase, C-terminal DYQ05_01915 IPR004739 GMP synthase, glutamine amidotransferase DYQ05_01915 IPR025777 GMP synthetase ATP pyrophosphatase domain DYQ05_01915 IPR022955 GMP synthase DYQ05_01925 IPR001525 C-5 cytosine methyltransferase DYQ05_01925 IPR018117 DNA methylase, C-5 cytosine-specific, active site DYQ05_01925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_01930 IPR019062 Restriction endonuclease, type II, HpaII DYQ05_01935 IPR004603 DNA mismatch endonuclease vsr DYQ05_01935 IPR007569 Protein of unknown function DUF559 DYQ05_01935 IPR011335 Restriction endonuclease type II-like DYQ05_01940 IPR003755 HPr(Ser) kinase/phosphorylase DYQ05_01940 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DYQ05_01940 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal DYQ05_01940 IPR011104 HPr kinase/phosphorylase, C-terminal DYQ05_01945 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DYQ05_01945 IPR035895 HPr-like superfamily DYQ05_01945 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DYQ05_01945 IPR000032 Phosphocarrier protein HPr-like DYQ05_01960 IPR017911 ABC transporter, macrolide export, ATP-binding domain DYQ05_01960 IPR003439 ABC transporter-like DYQ05_01960 IPR003838 ABC transporter permease protein domain DYQ05_01960 IPR003593 AAA+ ATPase domain DYQ05_01960 IPR017871 ABC transporter, conserved site DYQ05_01960 IPR025857 MacB-like periplasmic core domain DYQ05_01960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01965 IPR003838 ABC transporter permease protein domain DYQ05_01965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01965 IPR017871 ABC transporter, conserved site DYQ05_01965 IPR003439 ABC transporter-like DYQ05_01965 IPR003593 AAA+ ATPase domain DYQ05_01965 IPR025857 MacB-like periplasmic core domain DYQ05_01965 IPR017911 ABC transporter, macrolide export, ATP-binding domain DYQ05_01970 IPR006195 Aminoacyl-tRNA synthetase, class II DYQ05_01970 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DYQ05_01970 IPR004525 Elongation factor P--(R)-beta-lysine ligase DYQ05_01975 IPR017969 Heavy-metal-associated, conserved site DYQ05_01975 IPR006122 Heavy metal-associated domain, copper ion-binding DYQ05_01975 IPR006121 Heavy metal-associated domain, HMA DYQ05_01975 IPR018303 P-type ATPase, phosphorylation site DYQ05_01975 IPR036163 Heavy metal-associated domain superfamily DYQ05_01975 IPR027256 P-type ATPase, subfamily IB DYQ05_01975 IPR001757 P-type ATPase DYQ05_01975 IPR023298 P-type ATPase, transmembrane domain superfamily DYQ05_01975 IPR008250 P-type ATPase, A domain superfamily DYQ05_01975 IPR036412 HAD-like superfamily DYQ05_01975 IPR023214 HAD superfamily DYQ05_01975 IPR023299 P-type ATPase, cytoplasmic domain N DYQ05_01980 IPR002300 Aminoacyl-tRNA synthetase, class Ia DYQ05_01980 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DYQ05_01980 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DYQ05_01980 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm DYQ05_01980 IPR033705 Valyl tRNA synthetase, anticodon-binding domain DYQ05_01980 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DYQ05_01980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_01980 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DYQ05_01980 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DYQ05_01980 IPR002303 Valine-tRNA ligase DYQ05_01980 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DYQ05_01985 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_01985 IPR017871 ABC transporter, conserved site DYQ05_01985 IPR003439 ABC transporter-like DYQ05_01985 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_01985 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_01985 IPR003593 AAA+ ATPase domain DYQ05_01985 IPR039421 Type I protein exporter DYQ05_01985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_01995 IPR019897 RidA, conserved site DYQ05_01995 IPR006056 RidA family DYQ05_01995 IPR035959 RutC-like superfamily DYQ05_01995 IPR006175 YjgF/YER057c/UK114 family DYQ05_02000 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted DYQ05_02000 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DYQ05_02000 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DYQ05_02000 IPR001537 tRNA/rRNA methyltransferase, SpoU type DYQ05_02000 IPR004441 RNA methyltransferase TrmH family DYQ05_02000 IPR029064 50S ribosomal protein L30e-like DYQ05_02000 IPR029028 Alpha/beta knot methyltransferases DYQ05_02010 IPR001787 Ribosomal protein L21 DYQ05_02010 IPR018258 Ribosomal protein L21, conserved site DYQ05_02010 IPR028909 Ribosomal protein L21-like DYQ05_02010 IPR036164 L21-like superfamily DYQ05_02020 IPR001684 Ribosomal protein L27 DYQ05_02020 IPR018261 Ribosomal protein L27, conserved site DYQ05_02025 IPR031167 OBG-type guanine nucleotide-binding (G) domain DYQ05_02025 IPR035101 GTP-binding protein, Obg-type DYQ05_02025 IPR014100 GTP-binding protein Obg/CgtA DYQ05_02025 IPR006074 GTP1/OBG, conserved site DYQ05_02025 IPR006073 GTP binding domain DYQ05_02025 IPR036726 GTP1/OBG domain superfamily DYQ05_02025 IPR006169 GTP1/OBG domain DYQ05_02025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02030 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase DYQ05_02030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_02030 IPR004821 Cytidyltransferase-like domain DYQ05_02050 IPR008275 CoA enzyme activase DYQ05_02050 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type DYQ05_02055 IPR033479 Double Cache domain 1 DYQ05_02055 IPR003660 HAMP domain DYQ05_02055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_02055 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_02100 IPR038584 Ribosomal protein L33 superfamily DYQ05_02100 IPR001705 Ribosomal protein L33 DYQ05_02100 IPR018264 Ribosomal protein L33, conserved site DYQ05_02100 IPR011332 Zinc-binding ribosomal protein DYQ05_02110 IPR005807 SecE subunit of protein translocation complex, bacterial-like DYQ05_02110 IPR038379 SecE superfamily DYQ05_02110 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit DYQ05_02115 IPR008991 Translation protein SH3-like domain superfamily DYQ05_02115 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DYQ05_02115 IPR001062 Transcription antitermination protein, NusG DYQ05_02115 IPR005824 KOW DYQ05_02115 IPR014722 Ribosomal protein L2, domain 2 DYQ05_02115 IPR036735 NusG, N-terminal domain superfamily DYQ05_02115 IPR006645 NusG, N-terminal DYQ05_02120 IPR020784 Ribosomal protein L11, N-terminal DYQ05_02120 IPR020785 Ribosomal protein L11, conserved site DYQ05_02120 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DYQ05_02120 IPR020783 Ribosomal protein L11, C-terminal DYQ05_02120 IPR006519 Ribosomal protein L11, bacterial-type DYQ05_02120 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DYQ05_02120 IPR000911 Ribosomal protein L11/L12 DYQ05_02125 IPR005878 Ribosomal protein L1, bacterial-type DYQ05_02125 IPR002143 Ribosomal protein L1 DYQ05_02125 IPR023674 Ribosomal protein L1-like DYQ05_02125 IPR023673 Ribosomal protein L1, conserved site DYQ05_02125 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DYQ05_02125 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DYQ05_02130 IPR022973 Ribosomal protein L10 DYQ05_02130 IPR001790 Ribosomal protein L10P DYQ05_02135 IPR000206 Ribosomal protein L7/L12 DYQ05_02135 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily DYQ05_02135 IPR008932 Ribosomal protein L7/L12, oligomerisation DYQ05_02135 IPR013823 Ribosomal protein L7/L12, C-terminal DYQ05_02135 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DYQ05_02140 IPR007641 RNA polymerase Rpb2, domain 7 DYQ05_02140 IPR007645 RNA polymerase Rpb2, domain 3 DYQ05_02140 IPR037034 RNA polymerase Rpb2, domain 2 superfamily DYQ05_02140 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain DYQ05_02140 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily DYQ05_02140 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type DYQ05_02140 IPR007644 RNA polymerase, beta subunit, protrusion DYQ05_02140 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain DYQ05_02140 IPR015712 DNA-directed RNA polymerase, subunit 2 DYQ05_02140 IPR007642 RNA polymerase Rpb2, domain 2 DYQ05_02140 IPR014724 RNA polymerase Rpb2, OB-fold DYQ05_02140 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily DYQ05_02145 IPR038120 RNA polymerase Rpb1, funnel domain superfamily DYQ05_02145 IPR007083 RNA polymerase Rpb1, domain 4 DYQ05_02145 IPR042102 RNA polymerase Rpb1, domain 3 superfamily DYQ05_02145 IPR007066 RNA polymerase Rpb1, domain 3 DYQ05_02145 IPR007080 RNA polymerase Rpb1, domain 1 DYQ05_02145 IPR006592 RNA polymerase, N-terminal DYQ05_02145 IPR000722 RNA polymerase, alpha subunit DYQ05_02145 IPR012754 DNA-directed RNA polymerase, subunit beta-prime DYQ05_02145 IPR007081 RNA polymerase Rpb1, domain 5 DYQ05_02175 IPR035097 Peptidase M29, N-terminal DYQ05_02175 IPR000787 Peptidase M29 DYQ05_02180 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_02180 IPR000192 Aminotransferase class V domain DYQ05_02180 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DYQ05_02180 IPR010970 Cysteine desulfurase, SufS DYQ05_02180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_02180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_02200 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DYQ05_02200 IPR004154 Anticodon-binding DYQ05_02200 IPR036621 Anticodon-binding domain superfamily DYQ05_02200 IPR002320 Threonine-tRNA ligase, class IIa DYQ05_02200 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DYQ05_02200 IPR033728 Threonine-tRNA ligase catalytic core domain DYQ05_02200 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DYQ05_02200 IPR006195 Aminoacyl-tRNA synthetase, class II DYQ05_02205 IPR003594 Histidine kinase/HSP90-like ATPase DYQ05_02205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DYQ05_02205 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DYQ05_02210 IPR042035 DEAH helicase, winged-helix domain DYQ05_02210 IPR011545 DEAD/DEAH box helicase domain DYQ05_02210 IPR011709 Domain of unknown function DUF1605 DYQ05_02210 IPR007502 Helicase-associated domain DYQ05_02210 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02210 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_02210 IPR001650 Helicase, C-terminal DYQ05_02220 IPR000559 Formate-tetrahydrofolate ligase, FTHFS DYQ05_02220 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02220 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site DYQ05_02225 IPR036779 LysM domain superfamily DYQ05_02225 IPR018392 LysM domain DYQ05_02225 IPR000801 Putative esterase DYQ05_02225 IPR029058 Alpha/Beta hydrolase fold DYQ05_02230 IPR023367 Peptidase M42, domain 2 DYQ05_02230 IPR008007 Peptidase M42 DYQ05_02245 IPR000873 AMP-dependent synthetase/ligase DYQ05_02245 IPR020845 AMP-binding, conserved site DYQ05_02245 IPR042099 AMP-dependent synthetase-like superfamily DYQ05_02255 IPR009057 Homeobox-like domain superfamily DYQ05_02255 IPR001647 DNA-binding HTH domain, TetR-type DYQ05_02255 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal DYQ05_02255 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DYQ05_02260 IPR004445 Sodium/glutamate symport carrier protein GltS DYQ05_02265 IPR017871 ABC transporter, conserved site DYQ05_02265 IPR039421 Type I protein exporter DYQ05_02265 IPR003439 ABC transporter-like DYQ05_02265 IPR003593 AAA+ ATPase domain DYQ05_02265 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_02265 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_02265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02265 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_02280 IPR017871 ABC transporter, conserved site DYQ05_02280 IPR003593 AAA+ ATPase domain DYQ05_02280 IPR003439 ABC transporter-like DYQ05_02280 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02285 IPR003593 AAA+ ATPase domain DYQ05_02285 IPR017871 ABC transporter, conserved site DYQ05_02285 IPR013113 FAD-binding 9, siderophore-interacting DYQ05_02285 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_02285 IPR003439 ABC transporter-like DYQ05_02285 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DYQ05_02285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02285 IPR017938 Riboflavin synthase-like beta-barrel DYQ05_02285 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_02285 IPR007037 Siderophore-interacting protein, C-terminal domain DYQ05_02285 IPR017927 FAD-binding domain, ferredoxin reductase-type DYQ05_02300 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DYQ05_02300 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DYQ05_02300 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02300 IPR022879 V-type ATP synthase regulatory subunit B/beta DYQ05_02305 IPR002699 ATPase, V1 complex, subunit D DYQ05_02320 IPR029052 Metallo-dependent phosphatase-like DYQ05_02320 IPR005235 Metallophosphoesterase, YmdB-like DYQ05_02335 IPR013346 Ribonucleotide reductase, class I , alpha subunit DYQ05_02335 IPR039718 Ribonucleoside-diphosphate reductase large subunit DYQ05_02335 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DYQ05_02335 IPR013509 Ribonucleotide reductase large subunit, N-terminal DYQ05_02335 IPR000788 Ribonucleotide reductase large subunit, C-terminal DYQ05_02335 IPR005144 ATP-cone domain DYQ05_02340 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DYQ05_02340 IPR000192 Aminotransferase class V domain DYQ05_02340 IPR016454 Cysteine desulfurase DYQ05_02340 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_02340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_02340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_02345 IPR030963 3-dehydroquinate synthase family DYQ05_02345 IPR016037 3-dehydroquinate synthase AroB DYQ05_02345 IPR030960 3-dehydroquinate synthase domain DYQ05_02350 IPR010049 MTA/SAH nucleosidase DYQ05_02350 IPR035994 Nucleoside phosphorylase superfamily DYQ05_02350 IPR000845 Nucleoside phosphorylase domain DYQ05_02355 IPR002550 CNNM, transmembrane domain DYQ05_02355 IPR000644 CBS domain DYQ05_02355 IPR036318 FAD-binding, type PCMH-like superfamily DYQ05_02355 IPR005170 Transporter-associated domain DYQ05_02355 IPR016169 FAD-binding, type PCMH, subdomain 2 DYQ05_02375 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02375 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_02375 IPR017871 ABC transporter, conserved site DYQ05_02375 IPR003593 AAA+ ATPase domain DYQ05_02375 IPR003439 ABC transporter-like DYQ05_02380 IPR003593 AAA+ ATPase domain DYQ05_02380 IPR003439 ABC transporter-like DYQ05_02380 IPR017871 ABC transporter, conserved site DYQ05_02380 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_02380 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02385 IPR039424 Solute-binding protein family 5 DYQ05_02385 IPR030678 Peptide/nickel binding protein, MppA-type DYQ05_02385 IPR023765 Solute-binding protein family 5, conserved site DYQ05_02385 IPR000914 Solute-binding protein family 5 domain DYQ05_02390 IPR039424 Solute-binding protein family 5 DYQ05_02390 IPR030678 Peptide/nickel binding protein, MppA-type DYQ05_02390 IPR023765 Solute-binding protein family 5, conserved site DYQ05_02390 IPR000914 Solute-binding protein family 5 domain DYQ05_02395 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_02395 IPR035906 MetI-like superfamily DYQ05_02395 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DYQ05_02400 IPR035906 MetI-like superfamily DYQ05_02400 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_02425 IPR000160 GGDEF domain DYQ05_02425 IPR029787 Nucleotide cyclase DYQ05_02430 IPR029787 Nucleotide cyclase DYQ05_02430 IPR000160 GGDEF domain DYQ05_02430 IPR029016 GAF-like domain superfamily DYQ05_02455 IPR000887 KDPG/KHG aldolase DYQ05_02455 IPR031338 KDPG/KHG aldolase, active site 2 DYQ05_02455 IPR031337 KDPG/KHG aldolase, active site 1 DYQ05_02455 IPR013785 Aldolase-type TIM barrel DYQ05_02475 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_02475 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DYQ05_02475 IPR004090 Chemotaxis methyl-accepting receptor DYQ05_02475 IPR003660 HAMP domain DYQ05_02475 IPR000727 Target SNARE coiled-coil homology domain DYQ05_02490 IPR001789 Signal transduction response regulator, receiver domain DYQ05_02490 IPR003660 HAMP domain DYQ05_02490 IPR011006 CheY-like superfamily DYQ05_02490 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DYQ05_02490 IPR036641 HPT domain superfamily DYQ05_02490 IPR019247 Histidine kinase BarA, N-terminal DYQ05_02490 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DYQ05_02490 IPR005467 Histidine kinase domain DYQ05_02490 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DYQ05_02490 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DYQ05_02490 IPR003594 Histidine kinase/HSP90-like ATPase DYQ05_02490 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DYQ05_02495 IPR001789 Signal transduction response regulator, receiver domain DYQ05_02495 IPR011006 CheY-like superfamily DYQ05_02505 IPR013216 Methyltransferase type 11 DYQ05_02505 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DYQ05_02505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_02520 IPR001279 Metallo-beta-lactamase DYQ05_02520 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DYQ05_02530 IPR022892 Ribonuclease HI DYQ05_02530 IPR036397 Ribonuclease H superfamily DYQ05_02530 IPR002156 Ribonuclease H domain DYQ05_02530 IPR012337 Ribonuclease H-like superfamily DYQ05_02535 IPR013785 Aldolase-type TIM barrel DYQ05_02535 IPR006218 DAHP synthetase I/KDSA DYQ05_02535 IPR006219 DHAP synthase, class 1 DYQ05_02540 IPR003720 tRNA sulfurtransferase ThiI DYQ05_02540 IPR004114 THUMP domain DYQ05_02540 IPR020536 Thil, AANH domain DYQ05_02540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_02550 IPR003439 ABC transporter-like DYQ05_02550 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02550 IPR003593 AAA+ ATPase domain DYQ05_02565 IPR001270 ClpA/B family DYQ05_02565 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02565 IPR003593 AAA+ ATPase domain DYQ05_02565 IPR012763 DNA polymerase III, subunit gamma/ tau DYQ05_02565 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DYQ05_02565 IPR022754 DNA polymerase III, gamma subunit, domain III DYQ05_02575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DYQ05_02575 IPR001404 Heat shock protein Hsp90 family DYQ05_02575 IPR020575 Heat shock protein Hsp90, N-terminal DYQ05_02575 IPR037196 HSP90, C-terminal domain DYQ05_02575 IPR019805 Heat shock protein Hsp90, conserved site DYQ05_02575 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_02595 IPR000943 RNA polymerase sigma-70 DYQ05_02595 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_02595 IPR028630 RNA polymerase sigma factor RpoD DYQ05_02595 IPR012760 RNA polymerase sigma factor RpoD, C-terminal DYQ05_02595 IPR013324 RNA polymerase sigma factor, region 3/4-like DYQ05_02595 IPR042189 Sigma-70 factor, region 1.1 superfamily DYQ05_02595 IPR007127 RNA polymerase sigma factor 70, region 1.1 DYQ05_02595 IPR007630 RNA polymerase sigma-70 region 4 DYQ05_02595 IPR007624 RNA polymerase sigma-70 region 3 DYQ05_02595 IPR007627 RNA polymerase sigma-70 region 2 DYQ05_02595 IPR009042 RNA polymerase sigma-70 region 1.2 DYQ05_02595 IPR013325 RNA polymerase sigma factor, region 2 DYQ05_02595 IPR014284 RNA polymerase sigma-70 like domain DYQ05_02600 IPR007197 Radical SAM DYQ05_02600 IPR013785 Aldolase-type TIM barrel DYQ05_02600 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DYQ05_02615 IPR002698 5-formyltetrahydrofolate cyclo-ligase DYQ05_02615 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DYQ05_02615 IPR037171 NagB/RpiA transferase-like DYQ05_02620 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DYQ05_02620 IPR018313 Solute-binding protein family 3, conserved site DYQ05_02620 IPR001320 Ionotropic glutamate receptor DYQ05_02635 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone DYQ05_02635 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily DYQ05_02635 IPR018152 Superoxide dismutase, copper/zinc, binding site DYQ05_02635 IPR001424 Superoxide dismutase, copper/zinc binding domain DYQ05_02645 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DYQ05_02645 IPR010810 Flagellin hook, IN motif DYQ05_02645 IPR002371 Flagellar hook-associated protein 1 DYQ05_02650 IPR042187 Flagellin, C-terminal domain, subdomain 2 DYQ05_02650 IPR001029 Flagellin, D0/D1 domain DYQ05_02650 IPR010810 Flagellin hook, IN motif DYQ05_02650 IPR001492 Flagellin DYQ05_02655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_02655 IPR003660 HAMP domain DYQ05_02655 IPR033479 Double Cache domain 1 DYQ05_02655 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_02670 IPR032466 Metal-dependent hydrolase DYQ05_02670 IPR015991 Uncharacterised hydrolase TatD-type DYQ05_02670 IPR018228 Deoxyribonuclease, TatD-related, conserved site DYQ05_02670 IPR001130 TatD family DYQ05_02675 IPR001269 tRNA-dihydrouridine synthase DYQ05_02675 IPR013785 Aldolase-type TIM barrel DYQ05_02675 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 DYQ05_02675 IPR035587 DUS-like, FMN-binding domain DYQ05_02675 IPR018517 tRNA-dihydrouridine synthase, conserved site DYQ05_02685 IPR029787 Nucleotide cyclase DYQ05_02685 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase DYQ05_02690 IPR001226 Flavodoxin, conserved site DYQ05_02690 IPR008254 Flavodoxin/nitric oxide synthase DYQ05_02690 IPR010087 Flavodoxin, short chain DYQ05_02690 IPR029039 Flavoprotein-like superfamily DYQ05_02705 IPR000462 CDP-alcohol phosphatidyltransferase DYQ05_02705 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase DYQ05_02710 IPR000715 Glycosyl transferase, family 4 DYQ05_02710 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site DYQ05_02715 IPR003593 AAA+ ATPase domain DYQ05_02715 IPR020006 Flagellar biosynthesis protein FlhF DYQ05_02715 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02715 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DYQ05_02720 IPR025501 ATP binding protein MinD DYQ05_02720 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02720 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DYQ05_02730 IPR000943 RNA polymerase sigma-70 DYQ05_02730 IPR014284 RNA polymerase sigma-70 like domain DYQ05_02730 IPR007627 RNA polymerase sigma-70 region 2 DYQ05_02730 IPR007624 RNA polymerase sigma-70 region 3 DYQ05_02730 IPR007630 RNA polymerase sigma-70 region 4 DYQ05_02730 IPR012845 RNA polymerase sigma factor, FliA/WhiG DYQ05_02730 IPR013325 RNA polymerase sigma factor, region 2 DYQ05_02730 IPR013324 RNA polymerase sigma factor, region 3/4-like DYQ05_02760 IPR000358 Ribonucleotide reductase small subunit family DYQ05_02760 IPR030475 Ribonucleotide reductase small subunit, acitve site DYQ05_02760 IPR033909 Ribonucleotide reductase small subunit DYQ05_02760 IPR012348 Ribonucleotide reductase-like DYQ05_02760 IPR009078 Ferritin-like superfamily DYQ05_02765 IPR002549 Transmembrane protein TqsA-like DYQ05_02770 IPR004547 Glucosamine-6-phosphate isomerase DYQ05_02770 IPR018321 Glucosamine-6-phosphate isomerase, conserved site DYQ05_02770 IPR037171 NagB/RpiA transferase-like DYQ05_02770 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase DYQ05_02785 IPR002915 DeoC/FbaB/ lacD aldolase DYQ05_02785 IPR011343 Deoxyribose-phosphate aldolase DYQ05_02785 IPR013785 Aldolase-type TIM barrel DYQ05_02785 IPR028581 Deoxyribose-phosphate aldolase type I DYQ05_02790 IPR018631 AAA-ATPase-like domain DYQ05_02790 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_02795 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily DYQ05_02795 IPR030395 Glycerophosphodiester phosphodiesterase domain DYQ05_02800 IPR029057 Phosphoribosyltransferase-like DYQ05_02800 IPR005222 Competence protein ComF DYQ05_02800 IPR000836 Phosphoribosyltransferase domain DYQ05_02805 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DYQ05_02805 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DYQ05_02805 IPR008909 DALR anticodon binding DYQ05_02805 IPR035684 Arginyl-tRNA synthetase, catalytic core domain DYQ05_02805 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily DYQ05_02805 IPR001278 Arginine-tRNA ligase DYQ05_02805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_02805 IPR005148 Arginyl tRNA synthetase N-terminal domain DYQ05_02810 IPR041628 ChlI/MoxR, AAA lid domain DYQ05_02810 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02810 IPR011703 ATPase, AAA-3 DYQ05_02870 IPR002528 Multi antimicrobial extrusion protein DYQ05_02875 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DYQ05_02875 IPR007473 Ribosomal RNA large subunit methyltransferase J DYQ05_02875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_02880 IPR029057 Phosphoribosyltransferase-like DYQ05_02880 IPR005946 Ribose-phosphate pyrophosphokinase DYQ05_02880 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type DYQ05_02880 IPR000836 Phosphoribosyltransferase domain DYQ05_02880 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site DYQ05_02880 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain DYQ05_02890 IPR005837 Flagellar transport protein FliP DYQ05_02890 IPR005838 Type III secretion system inner membrane P protein DYQ05_02900 IPR028976 CheC-like superfamily DYQ05_02900 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb DYQ05_02900 IPR012826 Flagellar motor switch FliN DYQ05_02900 IPR036429 SpoA-like superfamily DYQ05_02900 IPR001543 Surface presentation of antigen (SpoA) DYQ05_02900 IPR007597 CheC-like protein DYQ05_02905 IPR036429 SpoA-like superfamily DYQ05_02905 IPR028976 CheC-like superfamily DYQ05_02905 IPR001543 Surface presentation of antigen (SpoA) DYQ05_02905 IPR001689 Flagellar motor switch protein FliM DYQ05_02910 IPR005503 Flagellar basal body-associated protein FliL DYQ05_02915 IPR006665 OmpA-like domain DYQ05_02915 IPR025713 Motility protein B, N-terminal domain DYQ05_02915 IPR036737 OmpA-like domain superfamily DYQ05_02920 IPR000540 Flagellar motor protein MotA, conserved site DYQ05_02920 IPR002898 MotA/TolQ/ExbB proton channel DYQ05_02930 IPR001444 Flagellar basal body rod protein, N-terminal DYQ05_02930 IPR037058 Flagellar hook protein FlgE superfamily DYQ05_02930 IPR011491 Flagellar hook protein FlgE DYQ05_02930 IPR019776 Flagellar basal body rod protein, conserved site DYQ05_02930 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DYQ05_02930 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DYQ05_02930 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DYQ05_02935 IPR005648 Flagellar hook capping protein DYQ05_02945 IPR000878 Tetrapyrrole methylase DYQ05_02945 IPR014776 Tetrapyrrole methylase, subdomain 2 DYQ05_02945 IPR035996 Tetrapyrrole methylase superfamily DYQ05_02945 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase DYQ05_02945 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DYQ05_02945 IPR014777 Tetrapyrrole methylase, subdomain 1 DYQ05_02950 IPR038029 GbiG N-terminal domain superfamily DYQ05_02950 IPR036518 CobE/GbiG C-terminal domain superfamily DYQ05_02950 IPR021745 Cobalamin biosynthesis central region DYQ05_02950 IPR002750 CobE/GbiG C-terminal domain DYQ05_02950 IPR021744 Cobalamin synthesis G, N-terminal DYQ05_02965 IPR003439 ABC transporter-like DYQ05_02965 IPR017871 ABC transporter, conserved site DYQ05_02965 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA DYQ05_02965 IPR008995 Molybdate/tungstate binding, C-terminal DYQ05_02965 IPR003593 AAA+ ATPase domain DYQ05_02965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_02975 IPR008523 Protein of unknown function DUF805 DYQ05_02985 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DYQ05_02985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03005 IPR001626 ABC transporter, TroCD-like DYQ05_03005 IPR037294 ABC transporter, BtuC-like DYQ05_03030 IPR009022 Elongation factor G, domain III DYQ05_03030 IPR004161 Translation elongation factor EFTu-like, domain 2 DYQ05_03030 IPR000640 Elongation factor EFG, domain V-like DYQ05_03030 IPR041095 Elongation Factor G, domain II DYQ05_03030 IPR035649 EFG, domain V DYQ05_03030 IPR031157 Tr-type G domain, conserved site DYQ05_03030 IPR035647 EF-G domain III/V-like DYQ05_03030 IPR005517 Translation elongation factor EFG/EF2, domain IV DYQ05_03030 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_03030 IPR004540 Translation elongation factor EFG/EF2 DYQ05_03030 IPR009000 Translation protein, beta-barrel domain superfamily DYQ05_03030 IPR000795 Transcription factor, GTP-binding domain DYQ05_03030 IPR005225 Small GTP-binding protein domain DYQ05_03030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03040 IPR011990 Tetratricopeptide-like helical domain superfamily DYQ05_03060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_03060 IPR000241 Putative RNA methylase domain DYQ05_03060 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DYQ05_03060 IPR004114 THUMP domain DYQ05_03075 IPR039421 Type I protein exporter DYQ05_03075 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03075 IPR033839 Lacticin 481 processing peptidase DYQ05_03075 IPR005074 Peptidase C39, bacteriocin processing DYQ05_03075 IPR003593 AAA+ ATPase domain DYQ05_03075 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_03075 IPR017871 ABC transporter, conserved site DYQ05_03075 IPR003439 ABC transporter-like DYQ05_03075 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_03080 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_03080 IPR017871 ABC transporter, conserved site DYQ05_03080 IPR003439 ABC transporter-like DYQ05_03080 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_03080 IPR003593 AAA+ ATPase domain DYQ05_03080 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_03080 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03120 IPR023095 Adenine-specific methyltransferase, domain 2 DYQ05_03120 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DYQ05_03120 IPR012327 D12 class N6 adenine-specific DNA methyltransferase DYQ05_03120 IPR012186 Adenine modification methylase, M.StsI-type DYQ05_03120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_03125 IPR012327 D12 class N6 adenine-specific DNA methyltransferase DYQ05_03125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_03125 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DYQ05_03125 IPR023095 Adenine-specific methyltransferase, domain 2 DYQ05_03125 IPR012186 Adenine modification methylase, M.StsI-type DYQ05_03155 IPR017871 ABC transporter, conserved site DYQ05_03155 IPR003439 ABC transporter-like DYQ05_03155 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03155 IPR003593 AAA+ ATPase domain DYQ05_03170 IPR018775 RNA repair pathway DNA polymerase beta DYQ05_03195 IPR041827 CpdB, N-terminal metallophosphatase domain DYQ05_03195 IPR008334 5'-Nucleotidase, C-terminal DYQ05_03195 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DYQ05_03195 IPR029052 Metallo-dependent phosphatase-like DYQ05_03195 IPR006146 5'-Nucleotidase, conserved site DYQ05_03195 IPR006179 5'-Nucleotidase/apyrase DYQ05_03195 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DYQ05_03195 IPR019931 LPXTG cell wall anchor domain DYQ05_03205 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_03205 IPR000705 Galactokinase DYQ05_03205 IPR022963 Galactokinase, bacterial DYQ05_03205 IPR006206 Mevalonate/galactokinase DYQ05_03205 IPR006203 GHMP kinase, ATP-binding, conserved site DYQ05_03205 IPR006204 GHMP kinase N-terminal domain DYQ05_03205 IPR036554 GHMP kinase, C-terminal domain superfamily DYQ05_03205 IPR019741 Galactokinase, conserved site DYQ05_03205 IPR019539 Galactokinase galactose-binding domain DYQ05_03205 IPR013750 GHMP kinase, C-terminal domain DYQ05_03205 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_03210 IPR001672 Phosphoglucose isomerase (PGI) DYQ05_03210 IPR023096 Phosphoglucose isomerase, C-terminal DYQ05_03210 IPR018189 Phosphoglucose isomerase, conserved site DYQ05_03210 IPR035476 Phosphoglucose isomerase, SIS domain 1 DYQ05_03210 IPR035482 Phosphoglucose isomerase, SIS domain 2 DYQ05_03215 IPR030393 EngB-type guanine nucleotide-binding (G) domain DYQ05_03215 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC DYQ05_03215 IPR006073 GTP binding domain DYQ05_03215 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03225 IPR042099 AMP-dependent synthetase-like superfamily DYQ05_03225 IPR025110 AMP-binding enzyme, C-terminal domain DYQ05_03225 IPR020459 AMP-binding DYQ05_03225 IPR020845 AMP-binding, conserved site DYQ05_03225 IPR000873 AMP-dependent synthetase/ligase DYQ05_03250 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit DYQ05_03250 IPR002319 Phenylalanyl-tRNA synthetase DYQ05_03250 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal DYQ05_03250 IPR006195 Aminoacyl-tRNA synthetase, class II DYQ05_03260 IPR002933 Peptidase M20 DYQ05_03260 IPR036264 Bacterial exopeptidase dimerisation domain DYQ05_03260 IPR017439 Amidohydrolase DYQ05_03260 IPR011650 Peptidase M20, dimerisation domain DYQ05_03280 IPR003593 AAA+ ATPase domain DYQ05_03280 IPR003439 ABC transporter-like DYQ05_03280 IPR017871 ABC transporter, conserved site DYQ05_03280 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03310 IPR021127 CRISPR-associated endonuclease Cas2 DYQ05_03310 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 DYQ05_03320 IPR041383 RuvC endonuclease subdomain 3 DYQ05_03320 IPR036397 Ribonuclease H superfamily DYQ05_03320 IPR033114 Cas9-type HNH domain DYQ05_03320 IPR028629 CRISPR-associated endonuclease Cas9 DYQ05_03320 IPR003615 HNH nuclease DYQ05_03320 IPR040619 Cas9, alpha-helical lobe domain DYQ05_03320 IPR040555 Cas9, PI domain DYQ05_03320 IPR040656 Cas9, WED domain DYQ05_03335 IPR003593 AAA+ ATPase domain DYQ05_03335 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_03335 IPR003439 ABC transporter-like DYQ05_03335 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_03335 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03335 IPR039421 Type I protein exporter DYQ05_03335 IPR017871 ABC transporter, conserved site DYQ05_03335 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_03350 IPR003593 AAA+ ATPase domain DYQ05_03350 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03350 IPR003439 ABC transporter-like DYQ05_03350 IPR017871 ABC transporter, conserved site DYQ05_03360 IPR009057 Homeobox-like domain superfamily DYQ05_03360 IPR037923 Transcription regulator HTH-like DYQ05_03360 IPR018060 DNA binding HTH domain, AraC-type DYQ05_03360 IPR018062 HTH domain AraC-type, conserved site DYQ05_03360 IPR020449 Transcription regulator HTH, AraC- type DYQ05_03360 IPR003313 AraC-type arabinose-binding/dimerisation domain DYQ05_03385 IPR007685 RelA/SpoT DYQ05_03390 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B DYQ05_03390 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal DYQ05_03390 IPR023042 Peptidase M17, leucine aminopeptidase DYQ05_03390 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal DYQ05_03410 IPR007269 Isoprenylcysteine carboxyl methyltransferase DYQ05_03415 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_03415 IPR003439 ABC transporter-like DYQ05_03415 IPR017871 ABC transporter, conserved site DYQ05_03415 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_03415 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_03415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03415 IPR003593 AAA+ ATPase domain DYQ05_03425 IPR000644 CBS domain DYQ05_03425 IPR038048 Magnesium transporter MgtE, transmembrane domain DYQ05_03425 IPR038076 MgtE, N-terminal domain superfamily DYQ05_03425 IPR006668 Magnesium transporter, MgtE intracellular domain DYQ05_03425 IPR006667 SLC41 divalent cation transporters, integral membrane domain DYQ05_03425 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily DYQ05_03425 IPR006669 Magnesium transporter MgtE DYQ05_03455 IPR036876 UVR domain superfamily DYQ05_03455 IPR001943 UVR domain DYQ05_03455 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03455 IPR041471 UvrB, interaction domain DYQ05_03455 IPR004807 UvrABC system, subunit B DYQ05_03455 IPR006935 Helicase/UvrB, N-terminal DYQ05_03455 IPR001650 Helicase, C-terminal DYQ05_03455 IPR024759 UvrB, YAD/RRR-motif-containing domain DYQ05_03455 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_03485 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DYQ05_03485 IPR011659 WD40-like Beta Propeller DYQ05_03485 IPR029058 Alpha/Beta hydrolase fold DYQ05_03485 IPR011042 Six-bladed beta-propeller, TolB-like DYQ05_03495 IPR011059 Metal-dependent hydrolase, composite domain superfamily DYQ05_03495 IPR006680 Amidohydrolase-related DYQ05_03495 IPR032466 Metal-dependent hydrolase DYQ05_03495 IPR005920 Imidazolonepropionase DYQ05_03505 IPR007229 Nicotinate phosphoribosyltransferase family DYQ05_03505 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain DYQ05_03505 IPR013785 Aldolase-type TIM barrel DYQ05_03505 IPR006405 Nicotinate phosphoribosyltransferase pncB-type DYQ05_03505 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase DYQ05_03505 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DYQ05_03505 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain DYQ05_03515 IPR001661 Glycoside hydrolase, family 37 DYQ05_03515 IPR012341 Six-hairpin glycosidase-like superfamily DYQ05_03515 IPR008928 Six-hairpin glycosidase superfamily DYQ05_03520 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DYQ05_03520 IPR033731 Glycyl-tRNA synthetase-like core domain DYQ05_03520 IPR022961 Glycine-tRNA ligase, bacterial DYQ05_03520 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 DYQ05_03520 IPR036621 Anticodon-binding domain superfamily DYQ05_03520 IPR004154 Anticodon-binding DYQ05_03520 IPR006195 Aminoacyl-tRNA synthetase, class II DYQ05_03520 IPR002315 Glycyl-tRNA synthetase DYQ05_03540 IPR017853 Glycoside hydrolase superfamily DYQ05_03540 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DYQ05_03540 IPR001764 Glycoside hydrolase, family 3, N-terminal DYQ05_03540 IPR019800 Glycoside hydrolase, family 3, active site DYQ05_03540 IPR002772 Glycoside hydrolase family 3 C-terminal domain DYQ05_03540 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily DYQ05_03560 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily DYQ05_03560 IPR003709 Peptidase M15B DYQ05_03565 IPR036513 STAS domain superfamily DYQ05_03565 IPR003658 Anti-sigma factor antagonist DYQ05_03565 IPR002645 STAS domain DYQ05_03580 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DYQ05_03580 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DYQ05_03580 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DYQ05_03580 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DYQ05_03580 IPR023546 Methylated-DNA--protein-cysteine methyltransferase DYQ05_03580 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_03580 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DYQ05_03585 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DYQ05_03585 IPR002470 Peptidase S9A, prolyl oligopeptidase DYQ05_03585 IPR023302 Peptidase S9A, N-terminal domain DYQ05_03585 IPR029058 Alpha/Beta hydrolase fold DYQ05_03590 IPR006504 Transcriptional regulator Spx/MgsR DYQ05_03590 IPR036249 Thioredoxin-like superfamily DYQ05_03590 IPR006660 Arsenate reductase-like DYQ05_03595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03595 IPR018022 IPP transferase DYQ05_03595 IPR039657 Dimethylallyltransferase DYQ05_03605 IPR002637 Ham1-like protein DYQ05_03605 IPR029001 Inosine triphosphate pyrophosphatase-like DYQ05_03605 IPR020922 dITP/XTP pyrophosphatase DYQ05_03610 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal DYQ05_03610 IPR013785 Aldolase-type TIM barrel DYQ05_03610 IPR035587 DUS-like, FMN-binding domain DYQ05_03610 IPR018517 tRNA-dihydrouridine synthase, conserved site DYQ05_03610 IPR001269 tRNA-dihydrouridine synthase DYQ05_03610 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 DYQ05_03610 IPR032887 tRNA-dihydrouridine synthase B DYQ05_03615 IPR001463 Sodium:alanine symporter DYQ05_03620 IPR020456 Acylphosphatase DYQ05_03620 IPR001792 Acylphosphatase-like domain DYQ05_03620 IPR036046 Acylphosphatase-like domain superfamily DYQ05_03620 IPR017968 Acylphosphatase, conserved site DYQ05_03640 IPR004193 Glycoside hydrolase, family 13, N-terminal DYQ05_03640 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DYQ05_03640 IPR013783 Immunoglobulin-like fold DYQ05_03640 IPR013780 Glycosyl hydrolase, all-beta DYQ05_03640 IPR011837 Glycogen debranching enzyme, GlgX type DYQ05_03640 IPR017853 Glycoside hydrolase superfamily DYQ05_03640 IPR014756 Immunoglobulin E-set DYQ05_03650 IPR001991 Sodium:dicarboxylate symporter DYQ05_03650 IPR018107 Sodium:dicarboxylate symporter, conserved site DYQ05_03650 IPR033380 Glutamate-aspartate symport protein GltP/GltT DYQ05_03650 IPR036458 Sodium:dicarboxylate symporter superfamily DYQ05_03655 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DYQ05_03655 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DYQ05_03655 IPR001926 Pyridoxal-phosphate dependent enzyme DYQ05_03655 IPR004450 Threonine synthase-like DYQ05_03655 IPR037158 Threonine synthase, N-terminal domain superfamily DYQ05_03665 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DYQ05_03665 IPR033910 Glutamyl-tRNA synthetase DYQ05_03665 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DYQ05_03665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_03665 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 DYQ05_03665 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial DYQ05_03665 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding DYQ05_03670 IPR001940 Peptidase S1C DYQ05_03670 IPR009003 Peptidase S1, PA clan DYQ05_03670 IPR036034 PDZ superfamily DYQ05_03670 IPR001478 PDZ domain DYQ05_03675 IPR001233 tRNA-splicing ligase, RtcB DYQ05_03675 IPR036025 tRNA-splicing ligase RtcB-like superfamily DYQ05_03680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_03680 IPR001085 Serine hydroxymethyltransferase DYQ05_03680 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site DYQ05_03680 IPR039429 Serine hydroxymethyltransferase-like domain DYQ05_03680 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_03685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_03685 IPR033911 Methioninyl-tRNA synthetase core domain DYQ05_03685 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DYQ05_03685 IPR012340 Nucleic acid-binding, OB-fold DYQ05_03685 IPR002547 tRNA-binding domain DYQ05_03685 IPR029038 Methionyl-tRNA synthetase, Zn-domain DYQ05_03685 IPR015413 Methionyl/Leucyl tRNA synthetase DYQ05_03685 IPR014758 Methionyl-tRNA synthetase DYQ05_03685 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DYQ05_03685 IPR023458 Methionine-tRNA ligase, type 1 DYQ05_03685 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain DYQ05_03690 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DYQ05_03690 IPR019491 Lipoate protein ligase, C-terminal DYQ05_03690 IPR004562 Lipoyltransferase/lipoate-protein ligase DYQ05_03695 IPR013785 Aldolase-type TIM barrel DYQ05_03695 IPR031691 Lipoyl synthase, N-terminal DYQ05_03695 IPR003698 Lipoyl synthase DYQ05_03695 IPR007197 Radical SAM DYQ05_03695 IPR006638 Elp3/MiaB/NifB DYQ05_03700 IPR002931 Transglutaminase-like DYQ05_03700 IPR038765 Papain-like cysteine peptidase superfamily DYQ05_03715 IPR015803 Cysteine-tRNA ligase DYQ05_03715 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR DYQ05_03715 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase DYQ05_03715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_03715 IPR032678 tRNA synthetases class I, catalytic domain DYQ05_03715 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DYQ05_03720 IPR001107 Band 7 domain DYQ05_03720 IPR001972 Stomatin family DYQ05_03720 IPR018080 Band 7/stomatin-like, conserved site DYQ05_03720 IPR036013 Band 7/SPFH domain superfamily DYQ05_03725 IPR001972 Stomatin family DYQ05_03725 IPR018080 Band 7/stomatin-like, conserved site DYQ05_03725 IPR036013 Band 7/SPFH domain superfamily DYQ05_03725 IPR001107 Band 7 domain DYQ05_03730 IPR023271 Aquaporin-like DYQ05_03730 IPR000292 Formate/nitrite transporter DYQ05_03730 IPR024002 Formate/nitrite transporter, conserved site DYQ05_03730 IPR023999 Formate transporter FocA, putative DYQ05_03735 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal DYQ05_03735 IPR022637 DNA polymerase III, beta sliding clamp, central DYQ05_03735 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal DYQ05_03735 IPR001001 DNA polymerase III, beta sliding clamp DYQ05_03740 IPR003395 RecF/RecN/SMC, N-terminal DYQ05_03740 IPR001238 DNA-binding, RecF DYQ05_03740 IPR018078 DNA-binding, RecF, conserved site DYQ05_03740 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03740 IPR042174 DNA-binding RecF, domain 2 DYQ05_03745 IPR041698 Methyltransferase domain 25 DYQ05_03745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_03745 IPR014369 Glycine/Sarcosine N-methyltransferase DYQ05_03775 IPR016154 Heat shock protein Hsp33, C-terminal DYQ05_03775 IPR000397 Heat shock protein Hsp33 DYQ05_03775 IPR016153 Heat shock protein Hsp33, N-terminal DYQ05_03785 IPR042119 QueA, domain 2 DYQ05_03785 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily DYQ05_03785 IPR042118 QueA, domain 1 DYQ05_03785 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA DYQ05_03800 IPR017871 ABC transporter, conserved site DYQ05_03800 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03800 IPR003439 ABC transporter-like DYQ05_03800 IPR003593 AAA+ ATPase domain DYQ05_03810 IPR023586 Isoleucine-tRNA ligase, type 2 DYQ05_03810 IPR002301 Isoleucine-tRNA ligase DYQ05_03810 IPR002300 Aminoacyl-tRNA synthetase, class Ia DYQ05_03810 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain DYQ05_03810 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DYQ05_03810 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DYQ05_03810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_03810 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DYQ05_03815 IPR007340 Opacity-associated protein A DYQ05_03815 IPR011055 Duplicated hybrid motif DYQ05_03815 IPR016047 Peptidase M23 DYQ05_03825 IPR024042 TM1646-like domain superfamily DYQ05_03825 IPR005585 Protein of unknown function DUF327 DYQ05_03830 IPR007557 PSP1, C-terminal DYQ05_03845 IPR011541 Nickel/cobalt transporter, high-affinity DYQ05_03855 IPR033479 Double Cache domain 1 DYQ05_03855 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_03855 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_03855 IPR003660 HAMP domain DYQ05_03860 IPR029061 Thiamin diphosphate-binding fold DYQ05_03860 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II DYQ05_03860 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily DYQ05_03860 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain DYQ05_03860 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DYQ05_03860 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DYQ05_03860 IPR011895 Pyruvate-flavodoxin oxidoreductase DYQ05_03860 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain DYQ05_03860 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal DYQ05_03860 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain DYQ05_03860 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DYQ05_03860 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DYQ05_03865 IPR003593 AAA+ ATPase domain DYQ05_03865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03865 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_03865 IPR017871 ABC transporter, conserved site DYQ05_03865 IPR003439 ABC transporter-like DYQ05_03865 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_03865 IPR039421 Type I protein exporter DYQ05_03865 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_03870 IPR003593 AAA+ ATPase domain DYQ05_03870 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_03870 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_03870 IPR003439 ABC transporter-like DYQ05_03870 IPR017871 ABC transporter, conserved site DYQ05_03870 IPR033839 Lacticin 481 processing peptidase DYQ05_03870 IPR005074 Peptidase C39, bacteriocin processing DYQ05_03870 IPR039421 Type I protein exporter DYQ05_03870 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03880 IPR003593 AAA+ ATPase domain DYQ05_03880 IPR003439 ABC transporter-like DYQ05_03880 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03880 IPR029439 Wzt, C-terminal DYQ05_03885 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DYQ05_03885 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily DYQ05_03885 IPR006130 Aspartate/ornithine carbamoyltransferase DYQ05_03885 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal DYQ05_03885 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DYQ05_03885 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DYQ05_03885 IPR002082 Aspartate carbamoyltransferase DYQ05_03885 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DYQ05_03885 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily DYQ05_03890 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DYQ05_03890 IPR004036 Endonuclease III-like, conserved site-2 DYQ05_03890 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DYQ05_03890 IPR003265 HhH-GPD domain DYQ05_03890 IPR011257 DNA glycosylase DYQ05_03890 IPR004035 Endonuclease III, iron-sulphur binding site DYQ05_03890 IPR005759 Endonuclease III DYQ05_03895 IPR003593 AAA+ ATPase domain DYQ05_03895 IPR041027 FtsK alpha domain DYQ05_03895 IPR002543 FtsK domain DYQ05_03895 IPR018541 FtsK gamma domain DYQ05_03895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03895 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_03895 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_03900 IPR003824 Undecaprenyl-diphosphatase UppP DYQ05_03910 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 DYQ05_03910 IPR004459 Cobyric acid synthase CobQ DYQ05_03910 IPR011698 CobB/CobQ-like glutamine amidotransferase DYQ05_03910 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03910 IPR017929 CobB/CobQ glutamine amidotransferase DYQ05_03910 IPR029062 Class I glutamine amidotransferase-like DYQ05_03915 IPR020595 MnmG-related, conserved site DYQ05_03915 IPR026904 GidA associated domain 3 DYQ05_03915 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG DYQ05_03915 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_03915 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related DYQ05_03920 IPR023358 Peptidase M18, domain 2 DYQ05_03920 IPR001948 Peptidase M18 DYQ05_03920 IPR022984 M18 family aminopeptidase 2, putative DYQ05_03930 IPR004131 Pyrophosphate-energised proton pump DYQ05_03935 IPR041719 Ferritin, prokaryotic-type DYQ05_03935 IPR008331 Ferritin/DPS protein domain DYQ05_03935 IPR009078 Ferritin-like superfamily DYQ05_03935 IPR009040 Ferritin-like diiron domain DYQ05_03935 IPR012347 Ferritin-like DYQ05_03935 IPR001519 Ferritin DYQ05_03940 IPR002470 Peptidase S9A, prolyl oligopeptidase DYQ05_03940 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DYQ05_03940 IPR023302 Peptidase S9A, N-terminal domain DYQ05_03940 IPR002471 Peptidase S9, serine active site DYQ05_03940 IPR029058 Alpha/Beta hydrolase fold DYQ05_03950 IPR005225 Small GTP-binding protein domain DYQ05_03950 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_03950 IPR030394 HflX-type guanine nucleotide-binding (G) domain DYQ05_03950 IPR032305 GTP-binding protein, middle domain DYQ05_03950 IPR006073 GTP binding domain DYQ05_03950 IPR016496 GTPase HflX DYQ05_03950 IPR025121 GTPase HflX, N-terminal DYQ05_03950 IPR042108 GTPase HflX, N-terminal domain superfamily DYQ05_03955 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase DYQ05_03955 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DYQ05_03955 IPR029056 Ribokinase-like DYQ05_03960 IPR002822 Nickel insertion protein DYQ05_03970 IPR022384 Formiminotransferase catalytic domain superfamily DYQ05_03970 IPR037064 Formiminotransferase, N-terminal subdomain superfamily DYQ05_03970 IPR012886 Formiminotransferase, N-terminal subdomain DYQ05_03970 IPR004227 Formiminotransferase catalytic domain DYQ05_03970 IPR037070 Formiminotransferase, C-terminal subdomain superfamily DYQ05_03970 IPR013802 Formiminotransferase, C-terminal subdomain DYQ05_03975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_03975 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_03975 IPR004839 Aminotransferase, class I/classII DYQ05_03975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_03975 IPR005860 L-threonine-O-3-phosphate decarboxylase DYQ05_03990 IPR035996 Tetrapyrrole methylase superfamily DYQ05_03990 IPR018063 SAM-dependent methyltransferase RsmI, conserved site DYQ05_03990 IPR008189 rRNA small subunit methyltransferase I DYQ05_03990 IPR014776 Tetrapyrrole methylase, subdomain 2 DYQ05_03990 IPR000878 Tetrapyrrole methylase DYQ05_03990 IPR014777 Tetrapyrrole methylase, subdomain 1 DYQ05_04000 IPR035994 Nucleoside phosphorylase superfamily DYQ05_04000 IPR000845 Nucleoside phosphorylase domain DYQ05_04000 IPR010049 MTA/SAH nucleosidase DYQ05_04005 IPR033454 RecG, wedge domain DYQ05_04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04005 IPR011545 DEAD/DEAH box helicase domain DYQ05_04005 IPR001650 Helicase, C-terminal DYQ05_04005 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_04005 IPR004609 ATP-dependent DNA helicase RecG DYQ05_04005 IPR012340 Nucleic acid-binding, OB-fold DYQ05_04010 IPR036627 CobW-like, C-terminal domain superfamily DYQ05_04010 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW DYQ05_04010 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DYQ05_04010 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04010 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DYQ05_04015 IPR036291 NAD(P)-binding domain superfamily DYQ05_04015 IPR013149 Alcohol dehydrogenase, C-terminal DYQ05_04015 IPR013154 Alcohol dehydrogenase, N-terminal DYQ05_04015 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DYQ05_04015 IPR011032 GroES-like superfamily DYQ05_04015 IPR020843 Polyketide synthase, enoylreductase domain DYQ05_04020 IPR003593 AAA+ ATPase domain DYQ05_04020 IPR003439 ABC transporter-like DYQ05_04020 IPR017871 ABC transporter, conserved site DYQ05_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04020 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_04025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04025 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_04025 IPR003593 AAA+ ATPase domain DYQ05_04025 IPR003439 ABC transporter-like DYQ05_04025 IPR017871 ABC transporter, conserved site DYQ05_04030 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DYQ05_04030 IPR035906 MetI-like superfamily DYQ05_04030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_04035 IPR035906 MetI-like superfamily DYQ05_04035 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_04040 IPR000741 Fructose-bisphosphate aldolase, class-I DYQ05_04040 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type DYQ05_04040 IPR013785 Aldolase-type TIM barrel DYQ05_04045 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYQ05_04045 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DYQ05_04045 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_04045 IPR023753 FAD/NAD(P)-binding domain DYQ05_04055 IPR009614 Toxin YoeB DYQ05_04055 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DYQ05_04065 IPR009614 Toxin YoeB DYQ05_04065 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DYQ05_04075 IPR002816 TraB family DYQ05_04075 IPR040230 Metalloprotease TIKI1/2-like DYQ05_04090 IPR007168 Phage shock protein, PspC, N-terminal DYQ05_04095 IPR036584 Flagellar protein FliS superfamily DYQ05_04095 IPR003713 Flagellar protein FliS DYQ05_04100 IPR036679 FlgN-like superfamily DYQ05_04110 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_04110 IPR003660 HAMP domain DYQ05_04125 IPR010017 tRNA U34 carboxymethyltransferase DYQ05_04125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_04125 IPR027555 tRNA (mo5U34)-methyltransferase-like DYQ05_04130 IPR007318 Phospholipid methyltransferase DYQ05_04135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04135 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_04135 IPR017871 ABC transporter, conserved site DYQ05_04135 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_04135 IPR039421 Type I protein exporter DYQ05_04135 IPR003439 ABC transporter-like DYQ05_04135 IPR003593 AAA+ ATPase domain DYQ05_04135 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_04150 IPR023544 ABC transporter, vitamin B12-binding protein DYQ05_04150 IPR002491 ABC transporter periplasmic binding domain DYQ05_04160 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04160 IPR003593 AAA+ ATPase domain DYQ05_04160 IPR003439 ABC transporter-like DYQ05_04160 IPR017871 ABC transporter, conserved site DYQ05_04165 IPR000522 ABC transporter, permease protein, BtuC-like DYQ05_04165 IPR037294 ABC transporter, BtuC-like DYQ05_04170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_04170 IPR013216 Methyltransferase type 11 DYQ05_04240 IPR035196 Protein of unknown function DUF5312 DYQ05_04260 IPR005720 Dihydroorotate dehydrogenase domain DYQ05_04260 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 DYQ05_04260 IPR001295 Dihydroorotate dehydrogenase, conserved site DYQ05_04260 IPR033888 Dihydroorotate dehydrogenase, class 1B DYQ05_04260 IPR013785 Aldolase-type TIM barrel DYQ05_04260 IPR024920 Dihydroorotate dehydrogenase, class 1 DYQ05_04275 IPR005524 Predicted permease DUF318 DYQ05_04285 IPR040982 DNA polymerase III alpha subunit finger domain DYQ05_04285 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain DYQ05_04285 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain DYQ05_04285 IPR016195 Polymerase/histidinol phosphatase-like DYQ05_04285 IPR004013 PHP domain DYQ05_04285 IPR003141 Polymerase/histidinol phosphatase, N-terminal DYQ05_04285 IPR029460 DNA polymerase, helix-hairpin-helix motif DYQ05_04285 IPR004805 DNA polymerase III, alpha subunit DYQ05_04290 IPR036291 NAD(P)-binding domain superfamily DYQ05_04290 IPR002347 Short-chain dehydrogenase/reductase SDR DYQ05_04295 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_04295 IPR000727 Target SNARE coiled-coil homology domain DYQ05_04295 IPR033479 Double Cache domain 1 DYQ05_04295 IPR004090 Chemotaxis methyl-accepting receptor DYQ05_04295 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_04295 IPR003660 HAMP domain DYQ05_04300 IPR007419 BFD-like [2Fe-2S]-binding domain DYQ05_04300 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DYQ05_04300 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_04300 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B DYQ05_04300 IPR023753 FAD/NAD(P)-binding domain DYQ05_04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04305 IPR003593 AAA+ ATPase domain DYQ05_04305 IPR003439 ABC transporter-like DYQ05_04305 IPR017871 ABC transporter, conserved site DYQ05_04325 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type DYQ05_04325 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DYQ05_04325 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase DYQ05_04325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_04330 IPR002781 Transmembrane protein TauE-like DYQ05_04340 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_04340 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_04340 IPR000944 Transcription regulator Rrf2-type DYQ05_04345 IPR036291 NAD(P)-binding domain superfamily DYQ05_04345 IPR016040 NAD(P)-binding domain DYQ05_04350 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal DYQ05_04350 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily DYQ05_04350 IPR013785 Aldolase-type TIM barrel DYQ05_04350 IPR013132 N-acetylneuraminic acid synthase, N-terminal DYQ05_04350 IPR013974 SAF domain DYQ05_04365 IPR024728 DNA polymerase type-Y, HhH motif DYQ05_04365 IPR017961 DNA polymerase, Y-family, little finger domain DYQ05_04365 IPR001126 UmuC domain DYQ05_04365 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DYQ05_04365 IPR022880 DNA polymerase IV DYQ05_04390 IPR003593 AAA+ ATPase domain DYQ05_04390 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04390 IPR017871 ABC transporter, conserved site DYQ05_04390 IPR003439 ABC transporter-like DYQ05_04400 IPR028431 NADP-reducing hydrogenase subunit HndA DYQ05_04400 IPR002023 NADH-quinone oxidoreductase subunit E-like DYQ05_04400 IPR042128 NuoE domain DYQ05_04400 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal DYQ05_04400 IPR036249 Thioredoxin-like superfamily DYQ05_04410 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily DYQ05_04410 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site DYQ05_04410 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DYQ05_04410 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DYQ05_04410 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DYQ05_04410 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DYQ05_04410 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain DYQ05_04415 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DYQ05_04415 IPR013352 Iron hydrogenase, subset DYQ05_04415 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DYQ05_04415 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DYQ05_04415 IPR004108 Iron hydrogenase, large subunit, C-terminal DYQ05_04415 IPR003149 Iron hydrogenase, small subunit DYQ05_04415 IPR036010 2Fe-2S ferredoxin-like superfamily DYQ05_04415 IPR036991 Iron hydrogenase, small subunit superfamily DYQ05_04415 IPR009016 Iron hydrogenase DYQ05_04415 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DYQ05_04430 IPR004299 Membrane bound O-acyl transferase, MBOAT DYQ05_04430 IPR028362 Alginate O-acetyltransferase AlgI DYQ05_04430 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB DYQ05_04435 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04435 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB DYQ05_04435 IPR017871 ABC transporter, conserved site DYQ05_04435 IPR003439 ABC transporter-like DYQ05_04435 IPR003593 AAA+ ATPase domain DYQ05_04440 IPR009078 Ferritin-like superfamily DYQ05_04440 IPR008331 Ferritin/DPS protein domain DYQ05_04440 IPR012347 Ferritin-like DYQ05_04440 IPR002177 DNA-binding protein Dps DYQ05_04445 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_04445 IPR033479 Double Cache domain 1 DYQ05_04445 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_04445 IPR003660 HAMP domain DYQ05_04465 IPR036868 TusA-like domain superfamily DYQ05_04465 IPR001455 TusA-like domain DYQ05_04490 IPR005889 Nitrate transport permease DYQ05_04490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_04490 IPR035906 MetI-like superfamily DYQ05_04495 IPR003593 AAA+ ATPase domain DYQ05_04495 IPR003439 ABC transporter-like DYQ05_04495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04495 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB DYQ05_04495 IPR017871 ABC transporter, conserved site DYQ05_04505 IPR017871 ABC transporter, conserved site DYQ05_04505 IPR003439 ABC transporter-like DYQ05_04505 IPR003593 AAA+ ATPase domain DYQ05_04505 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04510 IPR010327 FldB/FldC dehydratase alpha/beta subunit DYQ05_04530 IPR011344 Single-stranded DNA-binding protein DYQ05_04530 IPR012340 Nucleic acid-binding, OB-fold DYQ05_04530 IPR000424 Primosome PriB/single-strand DNA-binding DYQ05_04535 IPR039476 Pyridinium-3,5-biscarboxylic acid mononucleotide synthase DYQ05_04535 IPR000031 PurE domain DYQ05_04535 IPR035893 PurE domain superfamily DYQ05_04540 IPR004680 Citrate transporter-like domain DYQ05_04540 IPR000802 Arsenical pump membrane protein, ArsB DYQ05_04555 IPR000914 Solute-binding protein family 5 domain DYQ05_04555 IPR030678 Peptide/nickel binding protein, MppA-type DYQ05_04555 IPR023765 Solute-binding protein family 5, conserved site DYQ05_04555 IPR039424 Solute-binding protein family 5 DYQ05_04560 IPR035906 MetI-like superfamily DYQ05_04560 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_04565 IPR035906 MetI-like superfamily DYQ05_04565 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DYQ05_04565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_04570 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04570 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_04570 IPR017871 ABC transporter, conserved site DYQ05_04570 IPR003439 ABC transporter-like DYQ05_04570 IPR003593 AAA+ ATPase domain DYQ05_04575 IPR003593 AAA+ ATPase domain DYQ05_04575 IPR017871 ABC transporter, conserved site DYQ05_04575 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04575 IPR003439 ABC transporter-like DYQ05_04575 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_04580 IPR003593 AAA+ ATPase domain DYQ05_04580 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_04580 IPR003439 ABC transporter-like DYQ05_04580 IPR017871 ABC transporter, conserved site DYQ05_04580 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_04580 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04580 IPR039421 Type I protein exporter DYQ05_04580 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_04605 IPR018631 AAA-ATPase-like domain DYQ05_04605 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_04610 IPR004088 K Homology domain, type 1 DYQ05_04610 IPR036612 K Homology domain, type 1 superfamily DYQ05_04610 IPR012340 Nucleic acid-binding, OB-fold DYQ05_04610 IPR012162 Polyribonucleotide nucleotidyltransferase DYQ05_04610 IPR022967 RNA-binding domain, S1 DYQ05_04610 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain DYQ05_04610 IPR004087 K Homology domain DYQ05_04610 IPR003029 S1 domain DYQ05_04610 IPR027408 PNPase/RNase PH domain superfamily DYQ05_04610 IPR036345 Exoribonuclease, PH domain 2 superfamily DYQ05_04610 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_04610 IPR015847 Exoribonuclease, phosphorolytic domain 2 DYQ05_04610 IPR001247 Exoribonuclease, phosphorolytic domain 1 DYQ05_04615 IPR000589 Ribosomal protein S15 DYQ05_04615 IPR005290 Ribosomal protein S15, bacterial-type DYQ05_04615 IPR009068 S15/NS1, RNA-binding DYQ05_04620 IPR015864 FAD synthetase DYQ05_04620 IPR002606 Riboflavin kinase, bacterial DYQ05_04620 IPR023465 Riboflavin kinase domain superfamily DYQ05_04620 IPR023468 Riboflavin kinase DYQ05_04620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_04620 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic DYQ05_04625 IPR003660 HAMP domain DYQ05_04625 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_04625 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_04625 IPR033479 Double Cache domain 1 DYQ05_04650 IPR035985 Ubiquitin-activating enzyme DYQ05_04650 IPR000594 THIF-type NAD/FAD binding fold DYQ05_04655 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase DYQ05_04655 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site DYQ05_04655 IPR000715 Glycosyl transferase, family 4 DYQ05_04665 IPR029935 Uracil permease DYQ05_04665 IPR006042 Xanthine/uracil permease DYQ05_04665 IPR006043 Xanthine/uracil/vitamin C permease DYQ05_04680 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DYQ05_04680 IPR018948 GTP-binding protein TrmE, N-terminal DYQ05_04680 IPR005225 Small GTP-binding protein domain DYQ05_04680 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04680 IPR025867 MnmE, helical domain DYQ05_04680 IPR027368 tRNA modification GTPase MnmE domain 2 DYQ05_04680 IPR004520 tRNA modification GTPase MnmE DYQ05_04680 IPR006073 GTP binding domain DYQ05_04680 IPR031168 TrmE-type guanine nucleotide-binding domain DYQ05_04690 IPR000223 Peptidase S26A, signal peptidase I DYQ05_04690 IPR019533 Peptidase S26 DYQ05_04690 IPR019757 Peptidase S26A, signal peptidase I, lysine active site DYQ05_04690 IPR019758 Peptidase S26A, signal peptidase I, conserved site DYQ05_04690 IPR036286 LexA/Signal peptidase-like superfamily DYQ05_04705 IPR013848 Methylthiotransferase, N-terminal DYQ05_04705 IPR007197 Radical SAM DYQ05_04705 IPR006638 Elp3/MiaB/NifB DYQ05_04705 IPR023404 Radical SAM, alpha/beta horseshoe DYQ05_04705 IPR020612 Methylthiotransferase, conserved site DYQ05_04705 IPR005839 Methylthiotransferase DYQ05_04705 IPR038135 Methylthiotransferase, N-terminal domain superfamily DYQ05_04705 IPR005840 Ribosomal protein S12 methylthiotransferase RimO DYQ05_04705 IPR041582 RimO, TRAM domain DYQ05_04720 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase DYQ05_04720 IPR003660 HAMP domain DYQ05_04720 IPR029787 Nucleotide cyclase DYQ05_04730 IPR023214 HAD superfamily DYQ05_04730 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DYQ05_04730 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DYQ05_04730 IPR041492 Haloacid dehalogenase-like hydrolase DYQ05_04730 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DYQ05_04730 IPR036412 HAD-like superfamily DYQ05_04730 IPR037512 Phosphoglycolate phosphatase, prokaryotic DYQ05_04730 IPR006439 HAD hydrolase, subfamily IA DYQ05_04735 IPR042099 AMP-dependent synthetase-like superfamily DYQ05_04735 IPR000873 AMP-dependent synthetase/ligase DYQ05_04735 IPR020845 AMP-binding, conserved site DYQ05_04735 IPR025110 AMP-binding enzyme, C-terminal domain DYQ05_04740 IPR000914 Solute-binding protein family 5 domain DYQ05_04740 IPR023765 Solute-binding protein family 5, conserved site DYQ05_04740 IPR039424 Solute-binding protein family 5 DYQ05_04740 IPR030678 Peptide/nickel binding protein, MppA-type DYQ05_04745 IPR026590 Sirtuin family, catalytic core domain DYQ05_04745 IPR029035 DHS-like NAD/FAD-binding domain superfamily DYQ05_04745 IPR026591 Sirtuin, catalytic core small domain superfamily DYQ05_04750 IPR035801 Protein-ADP-ribose hydrolase, macro domain DYQ05_04750 IPR002589 Macro domain DYQ05_04765 IPR003593 AAA+ ATPase domain DYQ05_04765 IPR003439 ABC transporter-like DYQ05_04765 IPR017871 ABC transporter, conserved site DYQ05_04765 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04780 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DYQ05_04780 IPR001387 Cro/C1-type helix-turn-helix domain DYQ05_04780 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site DYQ05_04780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_04780 IPR018117 DNA methylase, C-5 cytosine-specific, active site DYQ05_04780 IPR001525 C-5 cytosine methyltransferase DYQ05_04785 IPR003960 ATPase, AAA-type, conserved site DYQ05_04785 IPR005936 Peptidase, FtsH DYQ05_04785 IPR003959 ATPase, AAA-type, core DYQ05_04785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04785 IPR041569 AAA ATPase, AAA+ lid domain DYQ05_04785 IPR003593 AAA+ ATPase domain DYQ05_04785 IPR011546 Peptidase M41, FtsH extracellular DYQ05_04785 IPR000642 Peptidase M41 DYQ05_04785 IPR037219 Peptidase M41-like DYQ05_04800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_04800 IPR011639 Restriction modification methylase Eco57I DYQ05_04800 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DYQ05_04860 IPR004304 Acetamidase/Formamidase DYQ05_04905 IPR000577 Carbohydrate kinase, FGGY DYQ05_04905 IPR018485 Carbohydrate kinase, FGGY, C-terminal DYQ05_04905 IPR018483 Carbohydrate kinase, FGGY, conserved site DYQ05_04905 IPR018484 Carbohydrate kinase, FGGY, N-terminal DYQ05_04905 IPR005999 Glycerol kinase DYQ05_04915 IPR022310 NAD/GMP synthase DYQ05_04915 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE DYQ05_04915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_04920 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04920 IPR039421 Type I protein exporter DYQ05_04920 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_04920 IPR017871 ABC transporter, conserved site DYQ05_04920 IPR003439 ABC transporter-like DYQ05_04920 IPR003593 AAA+ ATPase domain DYQ05_04920 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_04925 IPR003593 AAA+ ATPase domain DYQ05_04925 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_04925 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_04925 IPR003439 ABC transporter-like DYQ05_04925 IPR017871 ABC transporter, conserved site DYQ05_04925 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_04925 IPR039421 Type I protein exporter DYQ05_04925 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04930 IPR003593 AAA+ ATPase domain DYQ05_04930 IPR017871 ABC transporter, conserved site DYQ05_04930 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04930 IPR039421 Type I protein exporter DYQ05_04930 IPR003439 ABC transporter-like DYQ05_04930 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_04930 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_04945 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04945 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain DYQ05_04945 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR DYQ05_04950 IPR041468 ParB/Spo0J, HTH domain DYQ05_04950 IPR004437 ParB/RepB/Spo0J partition protein DYQ05_04950 IPR003115 ParB/Sulfiredoxin DYQ05_04950 IPR036086 ParB/Sulfiredoxin superfamily DYQ05_04955 IPR025669 AAA domain DYQ05_04955 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_04960 IPR033479 Double Cache domain 1 DYQ05_04960 IPR003660 HAMP domain DYQ05_04960 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_04960 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_04970 IPR000485 AsnC-type HTH domain DYQ05_04970 IPR011711 GntR, C-terminal DYQ05_04970 IPR008920 Transcription regulator FadR/GntR, C-terminal DYQ05_04970 IPR000524 Transcription regulator HTH, GntR DYQ05_04970 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_04970 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_04980 IPR013785 Aldolase-type TIM barrel DYQ05_04980 IPR003379 Carboxylase, conserved domain DYQ05_04980 IPR005776 Oxaloacetate decarboxylase, alpha subunit DYQ05_04980 IPR000891 Pyruvate carboxyltransferase DYQ05_04980 IPR011053 Single hybrid motif DYQ05_04980 IPR000089 Biotin/lipoyl attachment DYQ05_04980 IPR001882 Biotin-binding site DYQ05_04990 IPR000089 Biotin/lipoyl attachment DYQ05_04990 IPR001882 Biotin-binding site DYQ05_04990 IPR011053 Single hybrid motif DYQ05_04995 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit DYQ05_05000 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DYQ05_05000 IPR006495 Citrate lyase acyl carrier protein CitD DYQ05_05005 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DYQ05_05005 IPR040442 Pyruvate kinase-like domain superfamily DYQ05_05005 IPR006475 Citrate lyase, beta subunit, bacteria DYQ05_05005 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DYQ05_05005 IPR011206 Citrate lyase beta subunit-like DYQ05_05010 IPR037171 NagB/RpiA transferase-like DYQ05_05010 IPR006472 Citrate lyase, alpha subunit DYQ05_05025 IPR029045 ClpP/crotonase-like domain superfamily DYQ05_05025 IPR004634 Peptidase S49, protease IV DYQ05_05025 IPR004635 Peptidase S49, SppA DYQ05_05025 IPR002142 Peptidase S49 DYQ05_05030 IPR004095 TGS DYQ05_05030 IPR041706 YchF, N-terminal DYQ05_05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05030 IPR006073 GTP binding domain DYQ05_05030 IPR012675 Beta-grasp domain superfamily DYQ05_05030 IPR031167 OBG-type guanine nucleotide-binding (G) domain DYQ05_05030 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 DYQ05_05030 IPR013029 YchF, C-terminal domain DYQ05_05030 IPR023192 TGS-like domain superfamily DYQ05_05030 IPR012676 TGS-like DYQ05_05045 IPR004101 Mur ligase, C-terminal DYQ05_05045 IPR036565 Mur-like, catalytic domain superfamily DYQ05_05045 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase DYQ05_05045 IPR036615 Mur ligase, C-terminal domain superfamily DYQ05_05045 IPR013221 Mur ligase, central DYQ05_05050 IPR003760 ABC transporter substrate-binding protein PnrA-like DYQ05_05050 IPR028082 Periplasmic binding protein-like I DYQ05_05055 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05055 IPR003439 ABC transporter-like DYQ05_05055 IPR017871 ABC transporter, conserved site DYQ05_05060 IPR001851 ABC transporter, permease DYQ05_05065 IPR001851 ABC transporter, permease DYQ05_05070 IPR006230 Protein MutL DYQ05_05075 IPR006159 Methylmalonyl-CoA mutase, C-terminal DYQ05_05075 IPR006158 Cobalamin (vitamin B12)-binding domain DYQ05_05075 IPR036724 Cobalamin-binding domain superfamily DYQ05_05075 IPR006394 Glutamate mutase sigma subunit DYQ05_05085 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05085 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_05085 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_05085 IPR003439 ABC transporter-like DYQ05_05085 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_05085 IPR003593 AAA+ ATPase domain DYQ05_05085 IPR017871 ABC transporter, conserved site DYQ05_05090 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_05090 IPR006076 FAD dependent oxidoreductase DYQ05_05110 IPR042113 Phosphate acetyltransferase, domain 1 DYQ05_05110 IPR042112 Phosphate acetyltransferase, domain 2 DYQ05_05110 IPR002505 Phosphate acetyl/butaryl transferase DYQ05_05110 IPR012147 Phosphate acetyl/butyryltransferase DYQ05_05110 IPR004614 Phosphate acetyltransferase DYQ05_05115 IPR019734 Tetratricopeptide repeat DYQ05_05115 IPR011990 Tetratricopeptide-like helical domain superfamily DYQ05_05115 IPR013026 Tetratricopeptide repeat-containing domain DYQ05_05120 IPR042088 Oligoendopeptidase F, C-terminal domain DYQ05_05120 IPR013647 Oligopeptidase F, N-terminal domain DYQ05_05120 IPR001567 Peptidase M3A/M3B catalytic domain DYQ05_05120 IPR004438 Peptidase M3B, oligoendopeptidase F DYQ05_05125 IPR001270 ClpA/B family DYQ05_05125 IPR018368 ClpA/B, conserved site 1 DYQ05_05125 IPR028299 ClpA/B, conserved site 2 DYQ05_05125 IPR041546 ClpA/ClpB, AAA lid domain DYQ05_05125 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05125 IPR036628 Clp, N-terminal domain superfamily DYQ05_05125 IPR019489 Clp ATPase, C-terminal DYQ05_05125 IPR017730 Chaperonin ClpB DYQ05_05125 IPR003959 ATPase, AAA-type, core DYQ05_05125 IPR003593 AAA+ ATPase domain DYQ05_05125 IPR004176 Clp, N-terminal DYQ05_05130 IPR000623 Shikimate kinase/Threonine synthase-like 1 DYQ05_05130 IPR031322 Shikimate kinase/gluconokinase DYQ05_05130 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05130 IPR023000 Shikimate kinase, conserved site DYQ05_05140 IPR020095 Pseudouridine synthase I, TruA, C-terminal DYQ05_05140 IPR001406 Pseudouridine synthase I, TruA DYQ05_05140 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain DYQ05_05140 IPR020103 Pseudouridine synthase, catalytic domain superfamily DYQ05_05145 IPR018708 Protein of unknown function DUF2225 DYQ05_05150 IPR033755 PdxS/SNZ N-terminal domain DYQ05_05150 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ DYQ05_05150 IPR013785 Aldolase-type TIM barrel DYQ05_05150 IPR011060 Ribulose-phosphate binding barrel DYQ05_05165 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase DYQ05_05165 IPR000462 CDP-alcohol phosphatidyltransferase DYQ05_05175 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_05175 IPR003660 HAMP domain DYQ05_05180 IPR001270 ClpA/B family DYQ05_05180 IPR004487 Clp protease, ATP-binding subunit ClpX DYQ05_05180 IPR019489 Clp ATPase, C-terminal DYQ05_05180 IPR003959 ATPase, AAA-type, core DYQ05_05180 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05180 IPR010603 Zinc finger, ClpX C4-type DYQ05_05180 IPR038366 Zinc finger, ClpX C4-type superfamily DYQ05_05180 IPR003593 AAA+ ATPase domain DYQ05_05190 IPR008880 Trigger factor, C-terminal DYQ05_05190 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DYQ05_05190 IPR005215 Trigger factor DYQ05_05190 IPR037041 Trigger factor, C-terminal domain superfamily DYQ05_05190 IPR008881 Trigger factor, ribosome-binding, bacterial DYQ05_05190 IPR036611 Trigger factor ribosome-binding domain superfamily DYQ05_05190 IPR027304 Trigger factor/SurA domain superfamily DYQ05_05205 IPR004839 Aminotransferase, class I/classII DYQ05_05205 IPR027619 Putative C-S lyase DYQ05_05205 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_05205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_05205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_05210 IPR039672 Lactose permease-like DYQ05_05210 IPR036259 MFS transporter superfamily DYQ05_05210 IPR001927 Sodium:galactoside symporter DYQ05_05210 IPR018043 Sodium:galactoside symporter, conserved site DYQ05_05220 IPR001789 Signal transduction response regulator, receiver domain DYQ05_05220 IPR011006 CheY-like superfamily DYQ05_05230 IPR002545 CheW-like domain DYQ05_05230 IPR036061 CheW-like domain superfamily DYQ05_05230 IPR039315 Chemotaxis protein CheW DYQ05_05235 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DYQ05_05235 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding DYQ05_05235 IPR036061 CheW-like domain superfamily DYQ05_05235 IPR002545 CheW-like domain DYQ05_05235 IPR035891 CheY-binding domain of CheA DYQ05_05235 IPR004105 Histidine kinase CheA-like, homodimeric domain DYQ05_05235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DYQ05_05235 IPR005467 Histidine kinase domain DYQ05_05235 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DYQ05_05235 IPR036641 HPT domain superfamily DYQ05_05235 IPR003594 Histidine kinase/HSP90-like ATPase DYQ05_05250 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD DYQ05_05250 IPR017861 Kae1/TsaD family DYQ05_05250 IPR000905 Gcp-like domain DYQ05_05265 IPR034904 Fe-S cluster assembly domain superfamily DYQ05_05265 IPR017726 Fe/S biogenesis protein NfuA DYQ05_05265 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal DYQ05_05265 IPR000361 FeS cluster biogenesis DYQ05_05265 IPR035903 HesB-like domain superfamily DYQ05_05270 IPR036157 dUTPase-like superfamily DYQ05_05270 IPR029054 dUTPase-like DYQ05_05270 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase DYQ05_05270 IPR033704 dUTPase, trimeric DYQ05_05275 IPR032585 Protein of unknown function DUF4912 DYQ05_05285 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_05285 IPR028261 Dihydroprymidine dehydrogenase domain II DYQ05_05285 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 DYQ05_05285 IPR009051 Alpha-helical ferredoxin DYQ05_05285 IPR023753 FAD/NAD(P)-binding domain DYQ05_05290 IPR017938 Riboflavin synthase-like beta-barrel DYQ05_05290 IPR001433 Oxidoreductase FAD/NAD(P)-binding DYQ05_05290 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DYQ05_05290 IPR017927 FAD-binding domain, ferredoxin reductase-type DYQ05_05290 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain DYQ05_05290 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit DYQ05_05290 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DYQ05_05305 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DYQ05_05305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_05305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_05305 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_05315 IPR036010 2Fe-2S ferredoxin-like superfamily DYQ05_05315 IPR036884 [2Fe-2S]-binding domain superfamily DYQ05_05315 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DYQ05_05315 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DYQ05_05315 IPR002888 [2Fe-2S]-binding DYQ05_05315 IPR012675 Beta-grasp domain superfamily DYQ05_05320 IPR002346 Molybdopterin dehydrogenase, FAD-binding DYQ05_05320 IPR016167 FAD-binding, type PCMH, subdomain 1 DYQ05_05320 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily DYQ05_05320 IPR036318 FAD-binding, type PCMH-like superfamily DYQ05_05320 IPR005107 CO dehydrogenase flavoprotein, C-terminal DYQ05_05320 IPR016169 FAD-binding, type PCMH, subdomain 2 DYQ05_05320 IPR016166 FAD-binding domain, PCMH-type DYQ05_05330 IPR013765 DNA recombination and repair protein RecA DYQ05_05330 IPR020584 DNA recombination/repair protein RecA, conserved site DYQ05_05330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05330 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DYQ05_05330 IPR023400 DNA recombination and repair protein RecA, C-terminal DYQ05_05330 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface DYQ05_05330 IPR003593 AAA+ ATPase domain DYQ05_05335 IPR002191 Bacterial export protein family 3 DYQ05_05335 IPR006305 Flagellar biosynthesis protein FliQ DYQ05_05340 IPR006303 Flagellar biosynthesis protein FliR DYQ05_05340 IPR002010 Type III secretion system inner membrane R protein DYQ05_05345 IPR006136 Flagellar biosynthetic protein FlhB DYQ05_05345 IPR029025 Type III secretion system substrate exporter, C-terminal DYQ05_05345 IPR006135 Type III secretion system substrate exporter DYQ05_05365 IPR017969 Heavy-metal-associated, conserved site DYQ05_05365 IPR006122 Heavy metal-associated domain, copper ion-binding DYQ05_05365 IPR006121 Heavy metal-associated domain, HMA DYQ05_05365 IPR036163 Heavy metal-associated domain superfamily DYQ05_05365 IPR027256 P-type ATPase, subfamily IB DYQ05_05365 IPR001757 P-type ATPase DYQ05_05365 IPR008250 P-type ATPase, A domain superfamily DYQ05_05365 IPR023298 P-type ATPase, transmembrane domain superfamily DYQ05_05365 IPR023299 P-type ATPase, cytoplasmic domain N DYQ05_05365 IPR018303 P-type ATPase, phosphorylation site DYQ05_05365 IPR036412 HAD-like superfamily DYQ05_05365 IPR023214 HAD superfamily DYQ05_05375 IPR025944 Sigma-54 interaction domain, conserved site DYQ05_05375 IPR002078 RNA polymerase sigma factor 54 interaction domain DYQ05_05375 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05375 IPR002197 DNA binding HTH domain, Fis-type DYQ05_05375 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DYQ05_05375 IPR003593 AAA+ ATPase domain DYQ05_05375 IPR009057 Homeobox-like domain superfamily DYQ05_05375 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DYQ05_05395 IPR011060 Ribulose-phosphate binding barrel DYQ05_05395 IPR026019 Ribulose-phosphate 3-epimerase DYQ05_05395 IPR000056 Ribulose-phosphate 3-epimerase-like DYQ05_05395 IPR013785 Aldolase-type TIM barrel DYQ05_05410 IPR017167 Uncharacterised conserved protein UCP037291, glutaredoxin-related DYQ05_05410 IPR036249 Thioredoxin-like superfamily DYQ05_05430 IPR003593 AAA+ ATPase domain DYQ05_05430 IPR039421 Type I protein exporter DYQ05_05430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05430 IPR017871 ABC transporter, conserved site DYQ05_05430 IPR003439 ABC transporter-like DYQ05_05430 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_05430 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_05435 IPR011055 Duplicated hybrid motif DYQ05_05435 IPR007340 Opacity-associated protein A DYQ05_05435 IPR016047 Peptidase M23 DYQ05_05440 IPR003607 HD/PDEase domain DYQ05_05440 IPR006674 HD domain DYQ05_05440 IPR004087 K Homology domain DYQ05_05440 IPR004088 K Homology domain, type 1 DYQ05_05440 IPR036612 K Homology domain, type 1 superfamily DYQ05_05440 IPR017705 Ribonuclease Y DYQ05_05440 IPR022711 Ribonuclease Y, N-terminal DYQ05_05440 IPR006675 HDIG domain DYQ05_05465 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DYQ05_05465 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DYQ05_05465 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DYQ05_05465 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DYQ05_05470 IPR023544 ABC transporter, vitamin B12-binding protein DYQ05_05470 IPR002491 ABC transporter periplasmic binding domain DYQ05_05475 IPR000522 ABC transporter, permease protein, BtuC-like DYQ05_05475 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC DYQ05_05475 IPR037294 ABC transporter, BtuC-like DYQ05_05480 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05480 IPR017871 ABC transporter, conserved site DYQ05_05480 IPR003439 ABC transporter-like DYQ05_05480 IPR003593 AAA+ ATPase domain DYQ05_05500 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05500 IPR003439 ABC transporter-like DYQ05_05500 IPR017871 ABC transporter, conserved site DYQ05_05500 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_05500 IPR003593 AAA+ ATPase domain DYQ05_05500 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_05505 IPR003593 AAA+ ATPase domain DYQ05_05505 IPR039421 Type I protein exporter DYQ05_05505 IPR005074 Peptidase C39, bacteriocin processing DYQ05_05505 IPR003439 ABC transporter-like DYQ05_05505 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05505 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_05505 IPR005897 Peptidase C39, ABC-type bacteriocin transporter DYQ05_05505 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_05505 IPR017871 ABC transporter, conserved site DYQ05_05535 IPR003439 ABC transporter-like DYQ05_05535 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05535 IPR003593 AAA+ ATPase domain DYQ05_05545 IPR003593 AAA+ ATPase domain DYQ05_05545 IPR003439 ABC transporter-like DYQ05_05545 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05545 IPR017871 ABC transporter, conserved site DYQ05_05550 IPR003723 Precorrin-6x reductase DYQ05_05555 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DYQ05_05555 IPR006363 Precorrin-3B C17-methyltransferase domain DYQ05_05555 IPR014776 Tetrapyrrole methylase, subdomain 2 DYQ05_05555 IPR014777 Tetrapyrrole methylase, subdomain 1 DYQ05_05555 IPR035996 Tetrapyrrole methylase superfamily DYQ05_05555 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DYQ05_05555 IPR000878 Tetrapyrrole methylase DYQ05_05560 IPR003660 HAMP domain DYQ05_05560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_05560 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DYQ05_05560 IPR004090 Chemotaxis methyl-accepting receptor DYQ05_05565 IPR011698 CobB/CobQ-like glutamine amidotransferase DYQ05_05565 IPR029062 Class I glutamine amidotransferase-like DYQ05_05565 IPR017929 CobB/CobQ glutamine amidotransferase DYQ05_05565 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA DYQ05_05565 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DYQ05_05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05570 IPR012382 Precorrin-2 C(20)-methyltransferase DYQ05_05570 IPR014776 Tetrapyrrole methylase, subdomain 2 DYQ05_05570 IPR014777 Tetrapyrrole methylase, subdomain 1 DYQ05_05570 IPR035996 Tetrapyrrole methylase superfamily DYQ05_05570 IPR000878 Tetrapyrrole methylase DYQ05_05570 IPR006364 Precorrin-2 C(20)-methyltransferase domain DYQ05_05570 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DYQ05_05575 IPR010388 Anaerobic cobalt chelatase DYQ05_05595 IPR033479 Double Cache domain 1 DYQ05_05595 IPR003660 HAMP domain DYQ05_05595 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_05595 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_05600 IPR026902 RnfC Barrel sandwich hybrid domain DYQ05_05600 IPR019554 Soluble ligand binding domain DYQ05_05600 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DYQ05_05600 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC DYQ05_05600 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DYQ05_05600 IPR009051 Alpha-helical ferredoxin DYQ05_05600 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DYQ05_05600 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DYQ05_05605 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D DYQ05_05605 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD DYQ05_05610 IPR007329 FMN-binding DYQ05_05610 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG DYQ05_05615 IPR010968 Ion-translocating oxidoreductase complex subunit E DYQ05_05615 IPR003667 NqrDE/RnfAE DYQ05_05625 IPR029017 Enolase-like, N-terminal DYQ05_05625 IPR036849 Enolase-like, C-terminal domain superfamily DYQ05_05625 IPR022665 Methylaspartate ammonia-lyase, N-terminal DYQ05_05625 IPR022662 Methylaspartate ammonia-lyase, C-terminal DYQ05_05625 IPR006395 Methylaspartate ammonia-lyase DYQ05_05640 IPR011335 Restriction endonuclease type II-like DYQ05_05640 IPR003509 Uncharacterised protein family UPF0102 DYQ05_05640 IPR011856 tRNA endonuclease-like domain superfamily DYQ05_05645 IPR003607 HD/PDEase domain DYQ05_05645 IPR037522 HD-GYP domain DYQ05_05645 IPR001789 Signal transduction response regulator, receiver domain DYQ05_05645 IPR011006 CheY-like superfamily DYQ05_05650 IPR006135 Type III secretion system substrate exporter DYQ05_05650 IPR006136 Flagellar biosynthetic protein FlhB DYQ05_05650 IPR029025 Type III secretion system substrate exporter, C-terminal DYQ05_05660 IPR029028 Alpha/beta knot methyltransferases DYQ05_05660 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DYQ05_05660 IPR006700 Ribosomal RNA small subunit methyltransferase E DYQ05_05670 IPR003740 Uncharacterised membrane protein YitT DYQ05_05670 IPR019264 Domain of unknown function DUF2179 DYQ05_05670 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DYQ05_05680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_05680 IPR003682 rRNA small subunit methyltransferase G DYQ05_05685 IPR016160 Aldehyde dehydrogenase, cysteine active site DYQ05_05685 IPR016163 Aldehyde dehydrogenase, C-terminal DYQ05_05685 IPR016162 Aldehyde dehydrogenase, N-terminal DYQ05_05685 IPR016161 Aldehyde/histidinol dehydrogenase DYQ05_05685 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent DYQ05_05685 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DYQ05_05685 IPR015590 Aldehyde dehydrogenase domain DYQ05_05690 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal DYQ05_05690 IPR004770 Na+/H+ antiporter NhaC DYQ05_05695 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily DYQ05_05695 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic DYQ05_05695 IPR006396 Glutamate mutase epsilon subunit DYQ05_05700 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_05700 IPR000192 Aminotransferase class V domain DYQ05_05700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_05700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_05700 IPR016454 Cysteine desulfurase DYQ05_05700 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DYQ05_05700 IPR010240 Cysteine desulfurase IscS DYQ05_05715 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DYQ05_05715 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DYQ05_05725 IPR002528 Multi antimicrobial extrusion protein DYQ05_05730 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DYQ05_05730 IPR029052 Metallo-dependent phosphatase-like DYQ05_05730 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain DYQ05_05730 IPR004593 Nuclease SbcCD subunit D DYQ05_05735 IPR004592 Nuclease SbcC, gammaproteobacteria type DYQ05_05735 IPR038729 Rad50/SbcC-type AAA domain DYQ05_05735 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05750 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DYQ05_05750 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DYQ05_05755 IPR025682 CpXC domain DYQ05_05760 IPR020103 Pseudouridine synthase, catalytic domain superfamily DYQ05_05760 IPR036986 RNA-binding S4 domain superfamily DYQ05_05760 IPR002942 RNA-binding S4 domain DYQ05_05760 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DYQ05_05760 IPR006145 Pseudouridine synthase, RsuA/RluA DYQ05_05760 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DYQ05_05760 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DYQ05_05780 IPR005944 Proline iminopeptidase DYQ05_05780 IPR002410 Peptidase S33 DYQ05_05780 IPR000073 Alpha/beta hydrolase fold-1 DYQ05_05780 IPR029058 Alpha/Beta hydrolase fold DYQ05_05805 IPR023631 Amidase signature domain DYQ05_05805 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit DYQ05_05805 IPR036928 Amidase signature (AS) superfamily DYQ05_05805 IPR000120 Amidase DYQ05_05805 IPR020556 Amidase, conserved site DYQ05_05825 IPR018488 Cyclic nucleotide-binding, conserved site DYQ05_05825 IPR000595 Cyclic nucleotide-binding domain DYQ05_05825 IPR012318 Crp-type HTH domain DYQ05_05825 IPR014710 RmlC-like jelly roll fold DYQ05_05825 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_05825 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_05825 IPR018490 Cyclic nucleotide-binding-like DYQ05_05840 IPR002563 Flavin reductase like domain DYQ05_05840 IPR008254 Flavodoxin/nitric oxide synthase DYQ05_05840 IPR029039 Flavoprotein-like superfamily DYQ05_05840 IPR001279 Metallo-beta-lactamase DYQ05_05840 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DYQ05_05840 IPR012349 FMN-binding split barrel DYQ05_05855 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_05855 IPR023753 FAD/NAD(P)-binding domain DYQ05_05855 IPR005982 Thioredoxin reductase DYQ05_05855 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DYQ05_05860 IPR036249 Thioredoxin-like superfamily DYQ05_05860 IPR017937 Thioredoxin, conserved site DYQ05_05860 IPR013766 Thioredoxin domain DYQ05_05860 IPR005746 Thioredoxin DYQ05_05885 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DYQ05_05920 IPR039651 Protein FixC-like DYQ05_05920 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_05920 IPR002938 FAD-binding domain DYQ05_05925 IPR014122 Demethylmenaquinone methyltransferase DYQ05_05925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_05925 IPR004033 UbiE/COQ5 methyltransferase DYQ05_05925 IPR023576 UbiE/COQ5 methyltransferase, conserved site DYQ05_05935 IPR000092 Polyprenyl synthetase DYQ05_05935 IPR033749 Polyprenyl synthetase, conserved site DYQ05_05935 IPR014119 Heptaprenyl diphosphate synthase component II DYQ05_05935 IPR008949 Isoprenoid synthase domain superfamily DYQ05_05940 IPR024569 4Fe-4S binding protein, C-terminal DYQ05_05940 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DYQ05_05940 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DYQ05_05940 IPR003741 LUD domain DYQ05_05940 IPR022825 Lactate utilization protein B DYQ05_05940 IPR037171 NagB/RpiA transferase-like DYQ05_05940 IPR004452 4Fe-4S binding protein DYQ05_05940 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DYQ05_05940 IPR009051 Alpha-helical ferredoxin DYQ05_05950 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05950 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_05950 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_05950 IPR003593 AAA+ ATPase domain DYQ05_05950 IPR003439 ABC transporter-like DYQ05_05950 IPR017871 ABC transporter, conserved site DYQ05_05950 IPR039421 Type I protein exporter DYQ05_05955 IPR040612 ArsA, HSP20-like domain DYQ05_05955 IPR016300 Arsenical pump ATPase, ArsA/GET3 DYQ05_05955 IPR008978 HSP20-like chaperone DYQ05_05955 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05955 IPR025723 Anion-transporting ATPase-like domain DYQ05_05960 IPR008978 HSP20-like chaperone DYQ05_05960 IPR016300 Arsenical pump ATPase, ArsA/GET3 DYQ05_05960 IPR040612 ArsA, HSP20-like domain DYQ05_05960 IPR025723 Anion-transporting ATPase-like domain DYQ05_05960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_05965 IPR003804 L-lactate permease DYQ05_05970 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DYQ05_05970 IPR012255 Electron transfer flavoprotein, beta subunit DYQ05_05970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_05970 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal DYQ05_05975 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal DYQ05_05975 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site DYQ05_05975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_05975 IPR029035 DHS-like NAD/FAD-binding domain superfamily DYQ05_05975 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DYQ05_05975 IPR001308 Electron transfer flavoprotein alpha subunit/FixB DYQ05_05975 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal DYQ05_06100 IPR001091 Restriction/modification DNA-methylase DYQ05_06100 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site DYQ05_06100 IPR002941 DNA methylase N-4/N-6 DYQ05_06100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_06120 IPR008201 Protein of unknown function DUF86 DYQ05_06135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06135 IPR041677 DNA2/NAM7 helicase, AAA domain DYQ05_06135 IPR041679 DNA2/NAM7 helicase-like, AAA domain DYQ05_06135 IPR025103 Protein of unknown function DUF4011 DYQ05_06190 IPR005952 Phosphoglycerate mutase 1 DYQ05_06190 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DYQ05_06190 IPR029033 Histidine phosphatase superfamily DYQ05_06190 IPR013078 Histidine phosphatase superfamily, clade-1 DYQ05_06200 IPR006638 Elp3/MiaB/NifB DYQ05_06200 IPR013483 Molybdenum cofactor biosynthesis protein A DYQ05_06200 IPR013785 Aldolase-type TIM barrel DYQ05_06200 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site DYQ05_06200 IPR007197 Radical SAM DYQ05_06200 IPR010505 Molybdenum cofactor synthesis C-terminal DYQ05_06220 IPR040198 Fido domain-containing protein DYQ05_06220 IPR041657 Helix-turn-helix domain, group 17 DYQ05_06220 IPR010093 SinI-like, DNA-binding domain DYQ05_06220 IPR036597 Fido-like domain superfamily DYQ05_06220 IPR003812 Fido domain DYQ05_06300 IPR004402 Purine nucleoside phosphorylase DeoD-type DYQ05_06300 IPR018016 Nucleoside phosphorylase, conserved site DYQ05_06300 IPR035994 Nucleoside phosphorylase superfamily DYQ05_06300 IPR000845 Nucleoside phosphorylase domain DYQ05_06460 IPR020941 Suppressor of fused-like domain DYQ05_06470 IPR000073 Alpha/beta hydrolase fold-1 DYQ05_06470 IPR000639 Epoxide hydrolase-like DYQ05_06470 IPR023489 Haloalkane dehalogenase, subfamily 1 DYQ05_06470 IPR029058 Alpha/Beta hydrolase fold DYQ05_06495 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_06495 IPR017871 ABC transporter, conserved site DYQ05_06495 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_06495 IPR003593 AAA+ ATPase domain DYQ05_06495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06495 IPR003439 ABC transporter-like DYQ05_06495 IPR039421 Type I protein exporter DYQ05_06500 IPR006638 Elp3/MiaB/NifB DYQ05_06500 IPR013785 Aldolase-type TIM barrel DYQ05_06500 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site DYQ05_06500 IPR023885 4Fe4S-binding SPASM domain DYQ05_06500 IPR007197 Radical SAM DYQ05_06500 IPR017200 Coenzyme PQQ synthesis protein E DYQ05_06500 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria DYQ05_06530 IPR036812 NADP-dependent oxidoreductase domain superfamily DYQ05_06530 IPR023210 NADP-dependent oxidoreductase domain DYQ05_06530 IPR020471 Aldo/keto reductase DYQ05_06530 IPR018170 Aldo/keto reductase, conserved site DYQ05_06555 IPR033479 Double Cache domain 1 DYQ05_06555 IPR003660 HAMP domain DYQ05_06555 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_06555 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_06580 IPR018631 AAA-ATPase-like domain DYQ05_06580 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_06585 IPR018062 HTH domain AraC-type, conserved site DYQ05_06585 IPR009057 Homeobox-like domain superfamily DYQ05_06585 IPR020449 Transcription regulator HTH, AraC- type DYQ05_06585 IPR037923 Transcription regulator HTH-like DYQ05_06585 IPR018060 DNA binding HTH domain, AraC-type DYQ05_06585 IPR003313 AraC-type arabinose-binding/dimerisation domain DYQ05_06590 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_06590 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06590 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_06590 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_06590 IPR003439 ABC transporter-like DYQ05_06590 IPR039421 Type I protein exporter DYQ05_06590 IPR017871 ABC transporter, conserved site DYQ05_06590 IPR003593 AAA+ ATPase domain DYQ05_06595 IPR039421 Type I protein exporter DYQ05_06595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06595 IPR017871 ABC transporter, conserved site DYQ05_06595 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_06595 IPR003593 AAA+ ATPase domain DYQ05_06595 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_06595 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_06595 IPR003439 ABC transporter-like DYQ05_06635 IPR018383 Uncharacterised protein family UPF0324, prokaryote DYQ05_06645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06645 IPR017871 ABC transporter, conserved site DYQ05_06645 IPR003593 AAA+ ATPase domain DYQ05_06645 IPR003439 ABC transporter-like DYQ05_06655 IPR033479 Double Cache domain 1 DYQ05_06655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_06655 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_06655 IPR000727 Target SNARE coiled-coil homology domain DYQ05_06655 IPR003660 HAMP domain DYQ05_06660 IPR001576 Phosphoglycerate kinase DYQ05_06660 IPR036043 Phosphoglycerate kinase superfamily DYQ05_06660 IPR015824 Phosphoglycerate kinase, N-terminal DYQ05_06675 IPR001851 ABC transporter, permease DYQ05_06680 IPR001851 ABC transporter, permease DYQ05_06680 IPR002229 Blood group Rhesus C/E/D polypeptide DYQ05_06685 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06685 IPR017871 ABC transporter, conserved site DYQ05_06685 IPR003593 AAA+ ATPase domain DYQ05_06685 IPR003439 ABC transporter-like DYQ05_06690 IPR003760 ABC transporter substrate-binding protein PnrA-like DYQ05_06690 IPR028082 Periplasmic binding protein-like I DYQ05_06695 IPR017853 Glycoside hydrolase superfamily DYQ05_06695 IPR013785 Aldolase-type TIM barrel DYQ05_06695 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain DYQ05_06695 IPR016062 Hypothetical protein TM1410-related DYQ05_06695 IPR016063 Extracellular protein DYQ05_06720 IPR006714 Flagellar filament outer layer protein FlaA DYQ05_06720 IPR016369 Flagellar filament outer layer protein FlaA, Spirochaetes DYQ05_06730 IPR002583 Ribosomal protein S20 DYQ05_06730 IPR036510 Ribosomal protein S20 superfamily DYQ05_06735 IPR020816 Histone-like DNA-binding protein, conserved site DYQ05_06735 IPR000119 Histone-like DNA-binding protein DYQ05_06735 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DYQ05_06740 IPR004563 Apolipoprotein N-acyltransferase DYQ05_06740 IPR003010 Carbon-nitrogen hydrolase DYQ05_06740 IPR036526 Carbon-nitrogen hydrolase superfamily DYQ05_06750 IPR036653 CinA-like, C-terminal DYQ05_06750 IPR001453 MoaB/Mog domain DYQ05_06750 IPR036425 MoaB/Mog-like domain superfamily DYQ05_06750 IPR008136 CinA, C-terminal DYQ05_06750 IPR041424 CinA, KH domain DYQ05_06750 IPR008135 Competence-induced protein CinA DYQ05_06755 IPR000620 EamA domain DYQ05_06760 IPR005130 Serine dehydratase-like, alpha subunit DYQ05_06760 IPR021144 Uncharacterised protein family UPF0597 DYQ05_06765 IPR033479 Double Cache domain 1 DYQ05_06765 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_06765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_06765 IPR003660 HAMP domain DYQ05_06770 IPR002646 Poly A polymerase, head domain DYQ05_06770 IPR023068 CCA-adding enzyme, firmicutes DYQ05_06770 IPR032810 CCA-adding enzyme, C-terminal DYQ05_06770 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DYQ05_06790 IPR003439 ABC transporter-like DYQ05_06790 IPR017871 ABC transporter, conserved site DYQ05_06790 IPR039421 Type I protein exporter DYQ05_06790 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_06790 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06790 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_06790 IPR003593 AAA+ ATPase domain DYQ05_06795 IPR003593 AAA+ ATPase domain DYQ05_06795 IPR039421 Type I protein exporter DYQ05_06795 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_06795 IPR003439 ABC transporter-like DYQ05_06795 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06795 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_06825 IPR002616 tRNA-guanine(15) transglycosylase-like DYQ05_06825 IPR036511 Queuine tRNA-ribosyltransferase-like DYQ05_06825 IPR004803 tRNA-guanine transglycosylase DYQ05_06830 IPR020935 Phosphodiesterase YfcE, conserved site DYQ05_06830 IPR029052 Metallo-dependent phosphatase-like DYQ05_06830 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type DYQ05_06830 IPR000979 Phosphodiesterase MJ0936/Vps29 DYQ05_06845 IPR020594 Ribosomal protein L9, bacteria/chloroplast DYQ05_06845 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DYQ05_06845 IPR000244 Ribosomal protein L9 DYQ05_06845 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DYQ05_06845 IPR036935 Ribosomal protein L9, N-terminal domain superfamily DYQ05_06845 IPR020070 Ribosomal protein L9, N-terminal DYQ05_06845 IPR020069 Ribosomal protein L9, C-terminal DYQ05_06850 IPR018275 Ribosomal protein S18, conserved site DYQ05_06850 IPR036870 Ribosomal protein S18 superfamily DYQ05_06850 IPR001648 Ribosomal protein S18 DYQ05_06855 IPR011344 Single-stranded DNA-binding protein DYQ05_06855 IPR000424 Primosome PriB/single-strand DNA-binding DYQ05_06855 IPR012340 Nucleic acid-binding, OB-fold DYQ05_06860 IPR035980 Ribosomal protein S6 superfamily DYQ05_06860 IPR000529 Ribosomal protein S6 DYQ05_06860 IPR020815 Ribosomal protein S6, conserved site DYQ05_06860 IPR020814 Ribosomal protein S6, plastid/chloroplast DYQ05_06860 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DYQ05_06885 IPR031325 RHS repeat DYQ05_06885 IPR022385 Rhs repeat-associated core DYQ05_06885 IPR008727 PAAR motif DYQ05_06885 IPR003615 HNH nuclease DYQ05_06885 IPR006530 YD repeat DYQ05_06895 IPR008727 PAAR motif DYQ05_06895 IPR031325 RHS repeat DYQ05_06895 IPR006530 YD repeat DYQ05_06895 IPR022385 Rhs repeat-associated core DYQ05_06900 IPR026033 Azaguanine-like transporters DYQ05_06900 IPR006043 Xanthine/uracil/vitamin C permease DYQ05_06915 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD DYQ05_06915 IPR036074 CbiD superfamily DYQ05_06920 IPR004184 Pyruvate formate lyase domain DYQ05_06920 IPR001150 Glycine radical domain DYQ05_06920 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DYQ05_06920 IPR005949 Formate acetyltransferase DYQ05_06925 IPR012839 Organic radical enzyme activase DYQ05_06925 IPR034457 Organic radical-activating enzymes DYQ05_06925 IPR007197 Radical SAM DYQ05_06925 IPR001989 Radical-activating enzyme, conserved site DYQ05_06925 IPR013785 Aldolase-type TIM barrel DYQ05_06925 IPR034465 Pyruvate formate-lyase activase DYQ05_06925 IPR012838 Pyruvate formate-lyase 1 activating enzyme DYQ05_06930 IPR031107 Small heat shock protein HSP20 DYQ05_06930 IPR008978 HSP20-like chaperone DYQ05_06930 IPR002068 Alpha crystallin/Hsp20 domain DYQ05_06940 IPR011004 Trimeric LpxA-like superfamily DYQ05_06940 IPR032533 Protein of unknown function DUF4954 DYQ05_06965 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_06965 IPR003593 AAA+ ATPase domain DYQ05_06965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06965 IPR003439 ABC transporter-like DYQ05_06965 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC DYQ05_06965 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_06970 IPR003439 ABC transporter-like DYQ05_06970 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_06970 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_06970 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06970 IPR017871 ABC transporter, conserved site DYQ05_06970 IPR039421 Type I protein exporter DYQ05_06970 IPR003593 AAA+ ATPase domain DYQ05_06975 IPR003593 AAA+ ATPase domain DYQ05_06975 IPR017871 ABC transporter, conserved site DYQ05_06975 IPR003439 ABC transporter-like DYQ05_06975 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_06980 IPR037294 ABC transporter, BtuC-like DYQ05_06980 IPR000522 ABC transporter, permease protein, BtuC-like DYQ05_06985 IPR002491 ABC transporter periplasmic binding domain DYQ05_06990 IPR033480 Single Cache domain 2 DYQ05_06990 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_06990 IPR003660 HAMP domain DYQ05_06990 IPR004090 Chemotaxis methyl-accepting receptor DYQ05_06995 IPR011006 CheY-like superfamily DYQ05_06995 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type DYQ05_06995 IPR035909 Methylesterase CheB, C-terminal DYQ05_06995 IPR001789 Signal transduction response regulator, receiver domain DYQ05_06995 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DYQ05_07000 IPR026024 Chemotaxis protein methyltransferase CheR DYQ05_07000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_07000 IPR000780 MCP methyltransferase, CheR-type DYQ05_07000 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DYQ05_07000 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DYQ05_07000 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DYQ05_07015 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07015 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DYQ05_07015 IPR017871 ABC transporter, conserved site DYQ05_07015 IPR030921 LPS export ABC transporter, ATP-binding protein LptB DYQ05_07015 IPR003439 ABC transporter-like DYQ05_07015 IPR003593 AAA+ ATPase domain DYQ05_07020 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DYQ05_07020 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_07020 IPR010960 Flavocytochrome c DYQ05_07020 IPR029039 Flavoprotein-like superfamily DYQ05_07020 IPR007329 FMN-binding DYQ05_07020 IPR005025 NADPH-dependent FMN reductase-like DYQ05_07020 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DYQ05_07025 IPR006674 HD domain DYQ05_07025 IPR003607 HD/PDEase domain DYQ05_07035 IPR001160 Peptidase M20C, Xaa-His dipeptidase DYQ05_07035 IPR011650 Peptidase M20, dimerisation domain DYQ05_07035 IPR002933 Peptidase M20 DYQ05_07040 IPR015807 Histidine-tRNA ligase DYQ05_07040 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain DYQ05_07040 IPR006195 Aminoacyl-tRNA synthetase, class II DYQ05_07040 IPR036621 Anticodon-binding domain superfamily DYQ05_07040 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DYQ05_07050 IPR003805 Adenosylcobinamide-GDP ribazoletransferase DYQ05_07105 IPR003658 Anti-sigma factor antagonist DYQ05_07105 IPR002645 STAS domain DYQ05_07105 IPR036513 STAS domain superfamily DYQ05_07105 IPR014237 Anti-sigma F factor antagonist DYQ05_07135 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_07135 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase DYQ05_07135 IPR013441 Tyrosine phenol-lyase DYQ05_07135 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_07135 IPR018176 Tryptophanase, conserved site DYQ05_07135 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_07135 IPR011166 Beta-eliminating lyase family DYQ05_07140 IPR003439 ABC transporter-like DYQ05_07140 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07140 IPR012693 ABC transporter, phosphonate import, PhnC DYQ05_07140 IPR017871 ABC transporter, conserved site DYQ05_07140 IPR003593 AAA+ ATPase domain DYQ05_07150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_07150 IPR035906 MetI-like superfamily DYQ05_07150 IPR005769 ABC transporter, permease PhnE/PtxC DYQ05_07155 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily DYQ05_07155 IPR002842 V-type ATPase subunit E DYQ05_07175 IPR000183 Ornithine/DAP/Arg decarboxylase DYQ05_07175 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DYQ05_07175 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DYQ05_07175 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal DYQ05_07175 IPR002986 Diaminopimelate decarboxylase, LysA DYQ05_07175 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DYQ05_07175 IPR029066 PLP-binding barrel DYQ05_07185 IPR013440 Tryptophanase DYQ05_07185 IPR018176 Tryptophanase, conserved site DYQ05_07185 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_07185 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_07185 IPR011166 Beta-eliminating lyase family DYQ05_07185 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase DYQ05_07185 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_07195 IPR017871 ABC transporter, conserved site DYQ05_07195 IPR003439 ABC transporter-like DYQ05_07195 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07195 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_07195 IPR003593 AAA+ ATPase domain DYQ05_07200 IPR035906 MetI-like superfamily DYQ05_07200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_07200 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DYQ05_07205 IPR035906 MetI-like superfamily DYQ05_07205 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_07210 IPR023765 Solute-binding protein family 5, conserved site DYQ05_07210 IPR030678 Peptide/nickel binding protein, MppA-type DYQ05_07210 IPR039424 Solute-binding protein family 5 DYQ05_07210 IPR000914 Solute-binding protein family 5 domain DYQ05_07215 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_07215 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DYQ05_07215 IPR033479 Double Cache domain 1 DYQ05_07215 IPR003660 HAMP domain DYQ05_07215 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_07235 IPR025714 Methyltransferase domain DYQ05_07235 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DYQ05_07235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_07240 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family DYQ05_07255 IPR002178 PTS EIIA type-2 domain DYQ05_07255 IPR004715 Phosphotransferase system, IIA component fructose subfamily DYQ05_07255 IPR013014 Phosphotransferase system, EIIC component, type 2 DYQ05_07255 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DYQ05_07255 IPR036095 PTS system IIB component-like superfamily DYQ05_07255 IPR016152 Phosphotransferase/anion transporter DYQ05_07255 IPR006327 Phosphotransferase system, fructose IIC component DYQ05_07255 IPR003353 Phosphotransferase system, fructose-specific IIB subunit DYQ05_07255 IPR013011 Phosphotransferase system, EIIB component, type 2 DYQ05_07260 IPR004692 Preprotein translocase SecG subunit DYQ05_07270 IPR005139 Peptide chain release factor DYQ05_07270 IPR004373 Peptide chain release factor 1 DYQ05_07270 IPR000352 Peptide chain release factor class I DYQ05_07275 IPR004556 Methyltransferase HemK-like DYQ05_07275 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DYQ05_07275 IPR007848 Methyltransferase small domain DYQ05_07275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_07275 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific DYQ05_07275 IPR040758 Release factor glutamine methyltransferase, N-terminal domain DYQ05_07285 IPR036554 GHMP kinase, C-terminal domain superfamily DYQ05_07285 IPR006204 GHMP kinase N-terminal domain DYQ05_07285 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DYQ05_07285 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_07285 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_07285 IPR013750 GHMP kinase, C-terminal domain DYQ05_07290 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_07290 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DYQ05_07290 IPR006204 GHMP kinase N-terminal domain DYQ05_07290 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_07290 IPR036554 GHMP kinase, C-terminal domain superfamily DYQ05_07290 IPR013750 GHMP kinase, C-terminal domain DYQ05_07295 IPR006204 GHMP kinase N-terminal domain DYQ05_07295 IPR036554 GHMP kinase, C-terminal domain superfamily DYQ05_07295 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_07295 IPR013750 GHMP kinase, C-terminal domain DYQ05_07295 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DYQ05_07295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_07300 IPR036751 Stage V sporulation protein G superfamily DYQ05_07300 IPR007170 Stage V sporulation protein G DYQ05_07310 IPR001021 Ribosomal protein L25, long-form DYQ05_07310 IPR020057 Ribosomal protein L25, beta domain DYQ05_07310 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DYQ05_07310 IPR029751 Ribosomal protein L25 DYQ05_07310 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DYQ05_07310 IPR037121 Ribosomal protein L25, C-terminal DYQ05_07315 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07315 IPR005517 Translation elongation factor EFG/EF2, domain IV DYQ05_07315 IPR004540 Translation elongation factor EFG/EF2 DYQ05_07315 IPR009000 Translation protein, beta-barrel domain superfamily DYQ05_07315 IPR035647 EF-G domain III/V-like DYQ05_07315 IPR000640 Elongation factor EFG, domain V-like DYQ05_07315 IPR000795 Transcription factor, GTP-binding domain DYQ05_07315 IPR004161 Translation elongation factor EFTu-like, domain 2 DYQ05_07315 IPR005225 Small GTP-binding protein domain DYQ05_07315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_07315 IPR041095 Elongation Factor G, domain II DYQ05_07315 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_07315 IPR031157 Tr-type G domain, conserved site DYQ05_07315 IPR009022 Elongation factor G, domain III DYQ05_07325 IPR009078 Ferritin-like superfamily DYQ05_07325 IPR003251 Rubrerythrin DYQ05_07325 IPR009040 Ferritin-like diiron domain DYQ05_07325 IPR024934 Rubredoxin-like domain DYQ05_07325 IPR012347 Ferritin-like DYQ05_07330 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein DYQ05_07330 IPR003841 Sodium-dependent phosphate transport protein DYQ05_07345 IPR002293 Amino acid/polyamine transporter I DYQ05_07350 IPR029062 Class I glutamine amidotransferase-like DYQ05_07350 IPR017926 Glutamine amidotransferase DYQ05_07350 IPR011697 Peptidase C26 DYQ05_07355 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DYQ05_07355 IPR003593 AAA+ ATPase domain DYQ05_07355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07355 IPR012340 Nucleic acid-binding, OB-fold DYQ05_07355 IPR041703 Transcription termination factor Rho, ATP binding domain DYQ05_07355 IPR011112 Rho termination factor, N-terminal DYQ05_07355 IPR011113 Rho termination factor, RNA-binding domain DYQ05_07355 IPR004665 Transcription termination factor Rho DYQ05_07355 IPR011129 Cold shock domain DYQ05_07370 IPR013471 Ribonuclease Z/BN DYQ05_07370 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DYQ05_07370 IPR001279 Metallo-beta-lactamase DYQ05_07405 IPR003593 AAA+ ATPase domain DYQ05_07405 IPR032423 AAA C-terminal domain DYQ05_07405 IPR003959 ATPase, AAA-type, core DYQ05_07405 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DYQ05_07405 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07405 IPR021886 MgsA AAA+ ATPase C-terminal DYQ05_07410 IPR003593 AAA+ ATPase domain DYQ05_07410 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07410 IPR010230 FeS cluster assembly SUF system, ATPase SufC DYQ05_07410 IPR017871 ABC transporter, conserved site DYQ05_07410 IPR003439 ABC transporter-like DYQ05_07415 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DYQ05_07415 IPR010231 SUF system FeS cluster assembly, SufB DYQ05_07415 IPR000825 SUF system FeS cluster assembly, SufBD DYQ05_07425 IPR000847 Transcription regulator HTH, LysR DYQ05_07425 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_07425 IPR005119 LysR, substrate-binding DYQ05_07425 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_07430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07430 IPR017871 ABC transporter, conserved site DYQ05_07430 IPR003439 ABC transporter-like DYQ05_07430 IPR003593 AAA+ ATPase domain DYQ05_07440 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DYQ05_07440 IPR015413 Methionyl/Leucyl tRNA synthetase DYQ05_07440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_07440 IPR025709 Leucyl-tRNA synthetase, editing domain DYQ05_07440 IPR002302 Leucine-tRNA ligase DYQ05_07440 IPR002300 Aminoacyl-tRNA synthetase, class Ia DYQ05_07440 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DYQ05_07440 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DYQ05_07440 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DYQ05_07460 IPR015117 Ig protease IdeS DYQ05_07460 IPR038765 Papain-like cysteine peptidase superfamily DYQ05_07460 IPR005877 YSIRK Gram-positive signal peptide DYQ05_07470 IPR010935 SMCs flexible hinge DYQ05_07470 IPR036277 SMCs flexible hinge superfamily DYQ05_07470 IPR011890 Structural maintenance of chromosomes protein, prokaryotic DYQ05_07470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07470 IPR003395 RecF/RecN/SMC, N-terminal DYQ05_07470 IPR024704 Structural maintenance of chromosomes protein DYQ05_07480 IPR011990 Tetratricopeptide-like helical domain superfamily DYQ05_07480 IPR039565 Outer membrane lipoprotein BamD-like DYQ05_07645 IPR011324 Cytotoxic necrotizing factor-like, catalytic DYQ05_07645 IPR022385 Rhs repeat-associated core DYQ05_07645 IPR041508 Toxin complex C-like repeat DYQ05_07645 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily DYQ05_07645 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain DYQ05_07860 IPR023404 Radical SAM, alpha/beta horseshoe DYQ05_07860 IPR010723 HemN, C-terminal DYQ05_07860 IPR034505 Anaerobic coproporphyrinogen-III oxidase DYQ05_07860 IPR007197 Radical SAM DYQ05_07860 IPR004559 Heme chaperone HemW-like DYQ05_07860 IPR006638 Elp3/MiaB/NifB DYQ05_07875 IPR037294 ABC transporter, BtuC-like DYQ05_07875 IPR000522 ABC transporter, permease protein, BtuC-like DYQ05_07890 IPR016185 Pre-ATP-grasp domain superfamily DYQ05_07890 IPR000115 Phosphoribosylglycinamide synthetase DYQ05_07890 IPR020560 Phosphoribosylglycinamide synthetase, C-domain DYQ05_07890 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily DYQ05_07890 IPR020559 Phosphoribosylglycinamide synthetase, conserved site DYQ05_07890 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal DYQ05_07890 IPR011054 Rudiment single hybrid motif DYQ05_07890 IPR013815 ATP-grasp fold, subdomain 1 DYQ05_07890 IPR011761 ATP-grasp fold DYQ05_07890 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DYQ05_07895 IPR013815 ATP-grasp fold, subdomain 1 DYQ05_07895 IPR005905 D-alanine--D-alanine ligase DYQ05_07895 IPR016185 Pre-ATP-grasp domain superfamily DYQ05_07895 IPR011761 ATP-grasp fold DYQ05_07895 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DYQ05_07895 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DYQ05_07895 IPR011095 D-alanine--D-alanine ligase, C-terminal DYQ05_07905 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase DYQ05_07905 IPR036652 YjeF N-terminal domain superfamily DYQ05_07905 IPR004443 YjeF N-terminal domain DYQ05_07905 IPR017953 Carbohydrate kinase, predicted, conserved site DYQ05_07905 IPR029056 Ribokinase-like DYQ05_07905 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr DYQ05_07910 IPR011892 Cytidylate kinase, putative DYQ05_07910 IPR011994 Cytidylate kinase domain DYQ05_07910 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_07915 IPR005229 Conserved hypothetical protein CHP00255 DYQ05_07915 IPR013551 Domain of unknown function DUF1732 DYQ05_07915 IPR013527 YicC-like, N-terminal DYQ05_07920 IPR004101 Mur ligase, C-terminal DYQ05_07920 IPR036615 Mur ligase, C-terminal domain superfamily DYQ05_07920 IPR013221 Mur ligase, central DYQ05_07920 IPR000713 Mur ligase, N-terminal catalytic domain DYQ05_07920 IPR036565 Mur-like, catalytic domain superfamily DYQ05_07920 IPR005758 UDP-N-acetylmuramate--L-alanine ligase DYQ05_07925 IPR036565 Mur-like, catalytic domain superfamily DYQ05_07925 IPR013221 Mur ligase, central DYQ05_07925 IPR036615 Mur ligase, C-terminal domain superfamily DYQ05_07925 IPR004101 Mur ligase, C-terminal DYQ05_07925 IPR001645 Folylpolyglutamate synthetase DYQ05_07925 IPR018109 Folylpolyglutamate synthetase, conserved site DYQ05_07930 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DYQ05_07930 IPR006145 Pseudouridine synthase, RsuA/RluA DYQ05_07930 IPR020103 Pseudouridine synthase, catalytic domain superfamily DYQ05_07930 IPR006225 Pseudouridine synthase, RluC/RluD DYQ05_07930 IPR002942 RNA-binding S4 domain DYQ05_07930 IPR036986 RNA-binding S4 domain superfamily DYQ05_07935 IPR006145 Pseudouridine synthase, RsuA/RluA DYQ05_07935 IPR006225 Pseudouridine synthase, RluC/RluD DYQ05_07935 IPR020103 Pseudouridine synthase, catalytic domain superfamily DYQ05_07935 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DYQ05_07945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_07945 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site DYQ05_07945 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DYQ05_07945 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DYQ05_07945 IPR023165 rRNA adenine dimethylase-like DYQ05_07945 IPR011530 Ribosomal RNA adenine dimethylase DYQ05_07950 IPR016152 Phosphotransferase/anion transporter DYQ05_07950 IPR002178 PTS EIIA type-2 domain DYQ05_07950 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN DYQ05_07960 IPR006127 Periplasmic solute binding protein, ZnuA-like DYQ05_07960 IPR006128 Adhesion lipoprotein DYQ05_07960 IPR006129 Adhesin B DYQ05_07965 IPR012259 Dihydrofolate reductase DYQ05_07965 IPR017925 Dihydrofolate reductase conserved site DYQ05_07965 IPR001796 Dihydrofolate reductase domain DYQ05_07965 IPR024072 Dihydrofolate reductase-like domain superfamily DYQ05_07975 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily DYQ05_07975 IPR006157 Dihydroneopterin aldolase/epimerase domain DYQ05_07975 IPR006156 Dihydroneopterin aldolase DYQ05_07975 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK DYQ05_07980 IPR008258 Transglycosylase SLT domain 1 DYQ05_07980 IPR000189 Prokaryotic transglycosylase, active site DYQ05_07980 IPR010090 Phage tail tape measure protein DYQ05_07980 IPR016047 Peptidase M23 DYQ05_07980 IPR023346 Lysozyme-like domain superfamily DYQ05_07980 IPR011055 Duplicated hybrid motif DYQ05_07990 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site DYQ05_07990 IPR007627 RNA polymerase sigma-70 region 2 DYQ05_07990 IPR013324 RNA polymerase sigma factor, region 3/4-like DYQ05_07990 IPR039425 RNA polymerase sigma-70 like DYQ05_07990 IPR014284 RNA polymerase sigma-70 like domain DYQ05_07990 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_07990 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DYQ05_07990 IPR013325 RNA polymerase sigma factor, region 2 DYQ05_08005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_08005 IPR000705 Galactokinase DYQ05_08005 IPR036554 GHMP kinase, C-terminal domain superfamily DYQ05_08005 IPR013750 GHMP kinase, C-terminal domain DYQ05_08005 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_08005 IPR006206 Mevalonate/galactokinase DYQ05_08005 IPR019539 Galactokinase galactose-binding domain DYQ05_08010 IPR003010 Carbon-nitrogen hydrolase DYQ05_08010 IPR004563 Apolipoprotein N-acyltransferase DYQ05_08010 IPR036526 Carbon-nitrogen hydrolase superfamily DYQ05_08015 IPR003706 CstA, N-terminal domain DYQ05_08020 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DYQ05_08020 IPR011551 NTP pyrophosphohydrolase MazG DYQ05_08035 IPR029045 ClpP/crotonase-like domain superfamily DYQ05_08035 IPR001478 PDZ domain DYQ05_08035 IPR005151 Tail specific protease DYQ05_08035 IPR004447 C-terminal-processing peptidase S41A DYQ05_08035 IPR036034 PDZ superfamily DYQ05_08040 IPR002528 Multi antimicrobial extrusion protein DYQ05_08050 IPR003964 Carbamate kinase DYQ05_08050 IPR036393 Acetylglutamate kinase-like superfamily DYQ05_08050 IPR001048 Aspartate/glutamate/uridylate kinase DYQ05_08070 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type DYQ05_08070 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_08070 IPR006555 ATP-dependent helicase, C-terminal DYQ05_08070 IPR010614 DEAD2 DYQ05_08070 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_08070 IPR001650 Helicase, C-terminal DYQ05_08125 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain DYQ05_08125 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily DYQ05_08125 IPR011324 Cytotoxic necrotizing factor-like, catalytic DYQ05_08125 IPR022385 Rhs repeat-associated core DYQ05_08125 IPR041508 Toxin complex C-like repeat DYQ05_08310 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DYQ05_08310 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DYQ05_08310 IPR001279 Metallo-beta-lactamase DYQ05_08310 IPR022712 Beta-Casp domain DYQ05_08330 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DYQ05_08330 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal DYQ05_08330 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DYQ05_08330 IPR036291 NAD(P)-binding domain superfamily DYQ05_08330 IPR026255 NAD(P) transhydrogenase, alpha subunit DYQ05_08330 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 DYQ05_08330 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 DYQ05_08335 IPR020846 Major facilitator superfamily domain DYQ05_08335 IPR024989 Major facilitator superfamily associated domain DYQ05_08335 IPR036259 MFS transporter superfamily DYQ05_08350 IPR001547 Glycoside hydrolase, family 5 DYQ05_08350 IPR017853 Glycoside hydrolase superfamily DYQ05_08350 IPR018087 Glycoside hydrolase, family 5, conserved site DYQ05_08365 IPR036291 NAD(P)-binding domain superfamily DYQ05_08365 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DYQ05_08365 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DYQ05_08365 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYQ05_08365 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DYQ05_08370 IPR015507 Ribosomal RNA large subunit methyltransferase E DYQ05_08370 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DYQ05_08370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_08390 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_08390 IPR001977 Dephospho-CoA kinase DYQ05_08395 IPR002298 DNA polymerase A DYQ05_08395 IPR013520 Exonuclease, RNase T/DNA polymerase III DYQ05_08395 IPR018320 DNA polymerase 1 DYQ05_08395 IPR029060 PIN-like domain superfamily DYQ05_08395 IPR001098 DNA-directed DNA polymerase, family A, palm domain DYQ05_08395 IPR019760 DNA-directed DNA polymerase, family A, conserved site DYQ05_08395 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DYQ05_08395 IPR002421 5'-3' exonuclease, N-terminal DYQ05_08395 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal DYQ05_08395 IPR002562 3'-5' exonuclease domain DYQ05_08395 IPR012337 Ribonuclease H-like superfamily DYQ05_08395 IPR036397 Ribonuclease H superfamily DYQ05_08395 IPR008918 Helix-hairpin-helix motif, class 2 DYQ05_08395 IPR020045 DNA polymerase I-like, H3TH domain DYQ05_08410 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase DYQ05_08410 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site DYQ05_08410 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic DYQ05_08410 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal DYQ05_08410 IPR017459 Glycosyl transferase family 3, N-terminal domain DYQ05_08410 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DYQ05_08410 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DYQ05_08410 IPR000312 Glycosyl transferase, family 3 DYQ05_08410 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily DYQ05_08440 IPR015414 Transmembrane protein TMEM64 DYQ05_08440 IPR032816 SNARE associated Golgi protein DYQ05_08450 IPR036873 Rhodanese-like domain superfamily DYQ05_08450 IPR001763 Rhodanese-like domain DYQ05_08450 IPR023695 Thiosulfate sulfurtransferase, bacterial DYQ05_08460 IPR006685 Mechanosensitive ion channel MscS DYQ05_08460 IPR023408 Mechanosensitive ion channel MscS domain superfamily DYQ05_08460 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DYQ05_08460 IPR010920 LSM domain superfamily DYQ05_08490 IPR001307 Thiosulphate sulfurtransferase, conserved site DYQ05_08490 IPR036873 Rhodanese-like domain superfamily DYQ05_08490 IPR001763 Rhodanese-like domain DYQ05_08495 IPR003779 Carboxymuconolactone decarboxylase-like DYQ05_08495 IPR029032 AhpD-like DYQ05_08495 IPR004675 Alkylhydroperoxidase AhpD core DYQ05_08510 IPR035490 GlmS/FrlB, SIS domain 2 DYQ05_08510 IPR017932 Glutamine amidotransferase type 2 domain DYQ05_08510 IPR035466 GlmS/AgaS, SIS domain 1 DYQ05_08510 IPR001347 Sugar isomerase (SIS) DYQ05_08510 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DYQ05_08510 IPR029055 Nucleophile aminohydrolases, N-terminal DYQ05_08545 IPR019468 Adenylosuccinate lyase C-terminal DYQ05_08545 IPR022761 Fumarate lyase, N-terminal DYQ05_08545 IPR020557 Fumarate lyase, conserved site DYQ05_08545 IPR000362 Fumarate lyase family DYQ05_08545 IPR024083 Fumarase/histidase, N-terminal DYQ05_08545 IPR004769 Adenylosuccinate lyase DYQ05_08545 IPR008948 L-Aspartase-like DYQ05_08550 IPR013264 DNA primase, catalytic core, N-terminal DYQ05_08550 IPR002694 Zinc finger, CHC2-type DYQ05_08550 IPR006171 TOPRIM domain DYQ05_08550 IPR034151 Bacterial DnaG primase, TOPRIM domain DYQ05_08550 IPR030846 DNA primase DnaG, bacteria DYQ05_08550 IPR036977 DNA Primase, CHC2-type zinc finger DYQ05_08550 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DYQ05_08550 IPR006295 DNA primase, DnaG DYQ05_08555 IPR007624 RNA polymerase sigma-70 region 3 DYQ05_08555 IPR013325 RNA polymerase sigma factor, region 2 DYQ05_08555 IPR013324 RNA polymerase sigma factor, region 3/4-like DYQ05_08555 IPR007127 RNA polymerase sigma factor 70, region 1.1 DYQ05_08555 IPR012760 RNA polymerase sigma factor RpoD, C-terminal DYQ05_08555 IPR014284 RNA polymerase sigma-70 like domain DYQ05_08555 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_08555 IPR028630 RNA polymerase sigma factor RpoD DYQ05_08555 IPR000943 RNA polymerase sigma-70 DYQ05_08555 IPR009042 RNA polymerase sigma-70 region 1.2 DYQ05_08555 IPR007627 RNA polymerase sigma-70 region 2 DYQ05_08555 IPR007630 RNA polymerase sigma-70 region 4 DYQ05_08575 IPR004753 Cell shape determining protein MreB DYQ05_08590 IPR017790 Penicillin-binding protein 2 DYQ05_08590 IPR005311 Penicillin-binding protein, dimerisation domain DYQ05_08590 IPR012338 Beta-lactamase/transpeptidase-like DYQ05_08590 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DYQ05_08590 IPR001460 Penicillin-binding protein, transpeptidase DYQ05_08595 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DYQ05_08595 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DYQ05_08595 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB DYQ05_08615 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal DYQ05_08615 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_08615 IPR022878 V-type ATP synthase catalytic alpha chain DYQ05_08615 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DYQ05_08615 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DYQ05_08615 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DYQ05_08615 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DYQ05_08615 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension DYQ05_08620 IPR003660 HAMP domain DYQ05_08620 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_08620 IPR033479 Double Cache domain 1 DYQ05_08620 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_08630 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family DYQ05_08635 IPR002699 ATPase, V1 complex, subunit D DYQ05_08640 IPR022879 V-type ATP synthase regulatory subunit B/beta DYQ05_08640 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_08640 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DYQ05_08640 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DYQ05_08645 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal DYQ05_08645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_08645 IPR022878 V-type ATP synthase catalytic alpha chain DYQ05_08645 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DYQ05_08645 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DYQ05_08645 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension DYQ05_08645 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DYQ05_08645 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DYQ05_08650 IPR029057 Phosphoribosyltransferase-like DYQ05_08650 IPR005764 Adenine phosphoribosyl transferase DYQ05_08650 IPR000836 Phosphoribosyltransferase domain DYQ05_08675 IPR004380 Aspartate racemase DYQ05_08675 IPR033134 Asp/Glu racemase, active site 2 DYQ05_08675 IPR018187 Asp/Glu racemase, active site 1 DYQ05_08675 IPR001920 Asp/Glu racemase DYQ05_08675 IPR015942 Asp/Glu/hydantoin racemase DYQ05_08690 IPR003010 Carbon-nitrogen hydrolase DYQ05_08690 IPR036526 Carbon-nitrogen hydrolase superfamily DYQ05_08690 IPR001110 Uncharacterised protein family UPF0012, conserved site DYQ05_08710 IPR017856 Integrase-like, N-terminal DYQ05_08710 IPR002876 Transcriptional regulator TACO1-like DYQ05_08710 IPR026564 Transcriptional regulator TACO1-like, domain 3 DYQ05_08710 IPR029072 YebC-like DYQ05_08715 IPR016193 Cytidine deaminase-like DYQ05_08715 IPR011607 Methylglyoxal synthase-like domain DYQ05_08715 IPR036914 Methylglyoxal synthase-like domain superfamily DYQ05_08715 IPR002695 Bifunctional purine biosynthesis protein PurH-like DYQ05_08715 IPR024051 AICAR transformylase, duplicated domain superfamily DYQ05_08720 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_08720 IPR018631 AAA-ATPase-like domain DYQ05_08725 IPR023358 Peptidase M18, domain 2 DYQ05_08725 IPR022983 M18 family aminopeptidase 1, putative DYQ05_08725 IPR001948 Peptidase M18 DYQ05_08745 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ DYQ05_08745 IPR029069 HotDog domain superfamily DYQ05_08745 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DYQ05_08755 IPR001463 Sodium:alanine symporter DYQ05_08770 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DYQ05_08775 IPR014047 Chromate transporter, long chain DYQ05_08775 IPR003370 Chromate transporter DYQ05_08790 IPR004087 K Homology domain DYQ05_08790 IPR003714 PhoH-like protein DYQ05_08790 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_08790 IPR036612 K Homology domain, type 1 superfamily DYQ05_08795 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain DYQ05_08795 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain DYQ05_08795 IPR006675 HDIG domain DYQ05_08795 IPR003607 HD/PDEase domain DYQ05_08795 IPR006674 HD domain DYQ05_08800 IPR020549 Endoribonuclease YbeY, conserved site DYQ05_08800 IPR002036 Endoribonuclease YbeY DYQ05_08800 IPR023091 Metalloprotease catalytic domain superfamily, predicted DYQ05_08805 IPR000644 CBS domain DYQ05_08805 IPR005170 Transporter-associated domain DYQ05_08805 IPR036318 FAD-binding, type PCMH-like superfamily DYQ05_08805 IPR016169 FAD-binding, type PCMH, subdomain 2 DYQ05_08810 IPR006664 Outer membrane protein, bacterial DYQ05_08810 IPR006665 OmpA-like domain DYQ05_08810 IPR006690 Outer membrane protein, OmpA-like, conserved site DYQ05_08810 IPR036737 OmpA-like domain superfamily DYQ05_08815 IPR020599 Translation elongation factor P/YeiP DYQ05_08815 IPR013185 Translation elongation factor, KOW-like DYQ05_08815 IPR001059 Translation elongation factor P/YeiP, central DYQ05_08815 IPR011768 Translation elongation factor P DYQ05_08815 IPR014722 Ribosomal protein L2, domain 2 DYQ05_08815 IPR012340 Nucleic acid-binding, OB-fold DYQ05_08815 IPR015365 Elongation factor P, C-terminal DYQ05_08815 IPR008991 Translation protein SH3-like domain superfamily DYQ05_08825 IPR003675 CAAX prenyl protease 2 DYQ05_08850 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DYQ05_08850 IPR006222 Aminomethyltransferase, folate-binding domain DYQ05_08850 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DYQ05_08850 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain DYQ05_08850 IPR022903 Glycine cleavage system T protein, bacteria DYQ05_08850 IPR006223 Glycine cleavage system T protein DYQ05_08850 IPR028896 Aminomethyltransferase-like DYQ05_08865 IPR017453 Glycine cleavage system H-protein, subgroup DYQ05_08865 IPR011053 Single hybrid motif DYQ05_08865 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DYQ05_08865 IPR033753 Glycine cleavage system H-protein/Simiate DYQ05_08865 IPR002930 Glycine cleavage system H-protein DYQ05_08865 IPR000089 Biotin/lipoyl attachment DYQ05_08875 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 DYQ05_08875 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_08875 IPR020581 Glycine cleavage system P protein DYQ05_08875 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_08875 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_08880 IPR037004 Exonuclease VII, small subunit superfamily DYQ05_08880 IPR003761 Exonuclease VII, small subunit DYQ05_08885 IPR042120 MutL, C-terminal domain, dimerisation subdomain DYQ05_08885 IPR014762 DNA mismatch repair, conserved site DYQ05_08885 IPR020667 DNA mismatch repair protein, MutL DYQ05_08885 IPR013507 DNA mismatch repair protein, S5 domain 2-like DYQ05_08885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DYQ05_08885 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms DYQ05_08885 IPR014790 MutL, C-terminal, dimerisation DYQ05_08885 IPR037198 MutL, C-terminal domain superfamily DYQ05_08885 IPR002099 DNA mismatch repair protein family, N-terminal DYQ05_08885 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_08885 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_08885 IPR042121 MutL, C-terminal domain, regulatory subdomain DYQ05_08890 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DYQ05_08890 IPR036165 YefM-like superfamily DYQ05_08925 IPR000223 Peptidase S26A, signal peptidase I DYQ05_08925 IPR019758 Peptidase S26A, signal peptidase I, conserved site DYQ05_08925 IPR019757 Peptidase S26A, signal peptidase I, lysine active site DYQ05_08925 IPR019533 Peptidase S26 DYQ05_08925 IPR019756 Peptidase S26A, signal peptidase I, serine active site DYQ05_08925 IPR036286 LexA/Signal peptidase-like superfamily DYQ05_08930 IPR006638 Elp3/MiaB/NifB DYQ05_08930 IPR004559 Heme chaperone HemW-like DYQ05_08930 IPR007197 Radical SAM DYQ05_08930 IPR034505 Anaerobic coproporphyrinogen-III oxidase DYQ05_08930 IPR023404 Radical SAM, alpha/beta horseshoe DYQ05_08940 IPR018527 Rubredoxin, iron-binding site DYQ05_08940 IPR024935 Rubredoxin domain DYQ05_08940 IPR024934 Rubredoxin-like domain DYQ05_08940 IPR024922 Rubredoxin DYQ05_08950 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily DYQ05_08950 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like DYQ05_08950 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal DYQ05_08950 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic DYQ05_08960 IPR005235 Metallophosphoesterase, YmdB-like DYQ05_08960 IPR029052 Metallo-dependent phosphatase-like DYQ05_08970 IPR000092 Polyprenyl synthetase DYQ05_08970 IPR008949 Isoprenoid synthase domain superfamily DYQ05_08970 IPR033749 Polyprenyl synthetase, conserved site DYQ05_08985 IPR003593 AAA+ ATPase domain DYQ05_08985 IPR003439 ABC transporter-like DYQ05_08985 IPR017871 ABC transporter, conserved site DYQ05_08985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09020 IPR001463 Sodium:alanine symporter DYQ05_09030 IPR036264 Bacterial exopeptidase dimerisation domain DYQ05_09030 IPR010161 Peptidase M20B, tripeptide aminopeptidase DYQ05_09030 IPR002933 Peptidase M20 DYQ05_09030 IPR011650 Peptidase M20, dimerisation domain DYQ05_09030 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DYQ05_09035 IPR019614 S-adenosylmethionine-dependent methyltransferase DYQ05_09035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_09035 IPR023542 rRNA large subunit methyltransferase I DYQ05_09035 IPR041532 RlmI, PUA-like domain DYQ05_09035 IPR036974 PUA domain superfamily DYQ05_09035 IPR015947 PUA-like superfamily DYQ05_09035 IPR002478 PUA domain DYQ05_09040 IPR038380 Ribosomal protein S21 superfamily DYQ05_09040 IPR001911 Ribosomal protein S21 DYQ05_09040 IPR018278 Ribosomal protein S21, conserved site DYQ05_09045 IPR010994 RuvA domain 2-like DYQ05_09045 IPR004150 NAD-dependent DNA ligase, OB-fold DYQ05_09045 IPR012340 Nucleic acid-binding, OB-fold DYQ05_09045 IPR013840 NAD-dependent DNA ligase, N-terminal DYQ05_09045 IPR013839 NAD-dependent DNA ligase, adenylation DYQ05_09045 IPR001679 NAD-dependent DNA ligase DYQ05_09045 IPR018239 NAD-dependent DNA ligase, active site DYQ05_09045 IPR036420 BRCT domain superfamily DYQ05_09045 IPR001357 BRCT domain DYQ05_09065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_09065 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DYQ05_09065 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type DYQ05_09065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_09065 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_09065 IPR004839 Aminotransferase, class I/classII DYQ05_09065 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type DYQ05_09085 IPR023367 Peptidase M42, domain 2 DYQ05_09085 IPR008007 Peptidase M42 DYQ05_09090 IPR012301 Malic enzyme, N-terminal domain DYQ05_09090 IPR037062 Malic enzyme, N-terminal domain superfamily DYQ05_09090 IPR012302 Malic enzyme, NAD-binding DYQ05_09090 IPR001891 Malic oxidoreductase DYQ05_09090 IPR036291 NAD(P)-binding domain superfamily DYQ05_09090 IPR015884 Malic enzyme, conserved site DYQ05_09105 IPR007395 Putative neutral zinc metallopeptidase DYQ05_09110 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal DYQ05_09110 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DYQ05_09110 IPR023267 RNA (C5-cytosine) methyltransferase DYQ05_09110 IPR023545 rRNA small subunit methyltransferase F DYQ05_09110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_09110 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain DYQ05_09110 IPR011023 Nop2p DYQ05_09115 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DYQ05_09115 IPR006145 Pseudouridine synthase, RsuA/RluA DYQ05_09115 IPR020103 Pseudouridine synthase, catalytic domain superfamily DYQ05_09120 IPR019614 S-adenosylmethionine-dependent methyltransferase DYQ05_09120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_09125 IPR022876 Redox-sensing transcriptional repressor Rex DYQ05_09125 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_09125 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_09125 IPR036291 NAD(P)-binding domain superfamily DYQ05_09125 IPR003781 CoA-binding DYQ05_09125 IPR009718 Rex DNA-binding, C-terminal domain DYQ05_09130 IPR023865 Aliphatic acid kinase, short-chain, conserved site DYQ05_09130 IPR000890 Aliphatic acid kinase, short-chain DYQ05_09130 IPR004372 Acetate/propionate kinase DYQ05_09145 IPR006638 Elp3/MiaB/NifB DYQ05_09145 IPR013785 Aldolase-type TIM barrel DYQ05_09145 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr DYQ05_09145 IPR007197 Radical SAM DYQ05_09145 IPR027492 Dual-specificity RNA methyltransferase RlmN DYQ05_09145 IPR040072 Methyltransferase (Class A) DYQ05_09150 IPR000394 RNA polymerase sigma factor 54 DYQ05_09150 IPR007634 RNA polymerase sigma factor 54, DNA-binding DYQ05_09150 IPR007046 RNA polymerase sigma factor 54, core-binding domain DYQ05_09150 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DYQ05_09175 IPR001478 PDZ domain DYQ05_09175 IPR036034 PDZ superfamily DYQ05_09175 IPR011782 Peptidase S1C, Do DYQ05_09175 IPR009003 Peptidase S1, PA clan DYQ05_09175 IPR041489 PDZ domain 6 DYQ05_09175 IPR001940 Peptidase S1C DYQ05_09180 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase DYQ05_09180 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site DYQ05_09180 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily DYQ05_09185 IPR034683 Cytidylyltransferase IspD/TarI DYQ05_09185 IPR029044 Nucleotide-diphospho-sugar transferases DYQ05_09185 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site DYQ05_09185 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase DYQ05_09185 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site DYQ05_09185 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily DYQ05_09190 IPR042215 CarD-like, C-terminal domain DYQ05_09190 IPR036101 CarD-like/TRCF domain superfamily DYQ05_09190 IPR003711 CarD-like/TRCF domain DYQ05_09205 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09205 IPR017911 ABC transporter, macrolide export, ATP-binding domain DYQ05_09205 IPR003439 ABC transporter-like DYQ05_09205 IPR025857 MacB-like periplasmic core domain DYQ05_09205 IPR003593 AAA+ ATPase domain DYQ05_09205 IPR003838 ABC transporter permease protein domain DYQ05_09205 IPR017871 ABC transporter, conserved site DYQ05_09215 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09215 IPR017911 ABC transporter, macrolide export, ATP-binding domain DYQ05_09215 IPR025857 MacB-like periplasmic core domain DYQ05_09215 IPR017871 ABC transporter, conserved site DYQ05_09215 IPR003439 ABC transporter-like DYQ05_09215 IPR003838 ABC transporter permease protein domain DYQ05_09215 IPR003593 AAA+ ATPase domain DYQ05_09225 IPR006070 YrdC-like domain DYQ05_09225 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DYQ05_09260 IPR035919 EAL domain superfamily DYQ05_09260 IPR005330 MHYT domain DYQ05_09260 IPR029787 Nucleotide cyclase DYQ05_09260 IPR001633 EAL domain DYQ05_09260 IPR000160 GGDEF domain DYQ05_09275 IPR003593 AAA+ ATPase domain DYQ05_09275 IPR011006 CheY-like superfamily DYQ05_09275 IPR009057 Homeobox-like domain superfamily DYQ05_09275 IPR001789 Signal transduction response regulator, receiver domain DYQ05_09275 IPR002078 RNA polymerase sigma factor 54 interaction domain DYQ05_09275 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09275 IPR002197 DNA binding HTH domain, Fis-type DYQ05_09275 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DYQ05_09275 IPR025944 Sigma-54 interaction domain, conserved site DYQ05_09275 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DYQ05_09280 IPR022967 RNA-binding domain, S1 DYQ05_09280 IPR003029 S1 domain DYQ05_09280 IPR012340 Nucleic acid-binding, OB-fold DYQ05_09280 IPR000110 Ribosomal protein S1 DYQ05_09305 IPR041552 UvrA DNA-binding domain DYQ05_09305 IPR041102 UvrA, interaction domain DYQ05_09305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09305 IPR003439 ABC transporter-like DYQ05_09305 IPR017871 ABC transporter, conserved site DYQ05_09305 IPR004602 UvrABC system subunit A DYQ05_09345 IPR036779 LysM domain superfamily DYQ05_09345 IPR018392 LysM domain DYQ05_09345 IPR014248 Spore coat assembly protein SafA DYQ05_09350 IPR004770 Na+/H+ antiporter NhaC DYQ05_09350 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal DYQ05_09355 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_09355 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_09355 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_09355 IPR006237 L-methionine gamma-lyase DYQ05_09355 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DYQ05_09375 IPR024567 Ribonuclease HII/HIII domain DYQ05_09375 IPR036397 Ribonuclease H superfamily DYQ05_09375 IPR012337 Ribonuclease H-like superfamily DYQ05_09375 IPR001352 Ribonuclease HII/HIII DYQ05_09375 IPR022898 Ribonuclease HII DYQ05_09390 IPR003439 ABC transporter-like DYQ05_09390 IPR003593 AAA+ ATPase domain DYQ05_09390 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09390 IPR032781 ABC-transporter extension domain DYQ05_09395 IPR017853 Glycoside hydrolase superfamily DYQ05_09395 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DYQ05_09395 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase DYQ05_09395 IPR018120 Glycoside hydrolase family 1, active site DYQ05_09395 IPR001360 Glycoside hydrolase family 1 DYQ05_09405 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_09405 IPR018631 AAA-ATPase-like domain DYQ05_09415 IPR001900 Ribonuclease II/R DYQ05_09415 IPR012340 Nucleic acid-binding, OB-fold DYQ05_09420 IPR015500 Peptidase S8, subtilisin-related DYQ05_09420 IPR023828 Peptidase S8, subtilisin, Ser-active site DYQ05_09420 IPR022398 Peptidase S8, subtilisin, His-active site DYQ05_09420 IPR023827 Peptidase S8, subtilisin, Asp-active site DYQ05_09420 IPR036852 Peptidase S8/S53 domain superfamily DYQ05_09420 IPR000209 Peptidase S8/S53 domain DYQ05_09420 IPR034193 Proteinase K-like catalytic domain DYQ05_09420 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily DYQ05_09420 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 DYQ05_09440 IPR014718 Glycoside hydrolase-type carbohydrate-binding DYQ05_09440 IPR013458 Aldose 1-epimerase, bacterial DYQ05_09440 IPR018052 Aldose 1-epimerase, conserved site DYQ05_09440 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DYQ05_09440 IPR011013 Galactose mutarotase-like domain superfamily DYQ05_09440 IPR015443 Aldose 1-epimerase DYQ05_09450 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal DYQ05_09450 IPR010914 RsgA GTPase domain DYQ05_09450 IPR004881 Ribosome biogenesis GTPase RsgA DYQ05_09450 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09450 IPR012340 Nucleic acid-binding, OB-fold DYQ05_09450 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain DYQ05_09465 IPR002904 Lysine-tRNA ligase DYQ05_09465 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding DYQ05_09465 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DYQ05_09465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_09465 IPR042078 Lysine tRNA ligase, stem contact fold domain DYQ05_09465 IPR023386 Lysine-tRNA ligase, insertion domain superfamily DYQ05_09465 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 DYQ05_09470 IPR004839 Aminotransferase, class I/classII DYQ05_09470 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DYQ05_09470 IPR005861 Histidinol-phosphate aminotransferase family DYQ05_09470 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DYQ05_09470 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_09470 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_09480 IPR041445 RuvB, AAA lid domain DYQ05_09480 IPR008824 RuvB-like P-loop domain DYQ05_09480 IPR004605 DNA helicase, Holliday junction RuvB-type DYQ05_09480 IPR008823 RuvB C-terminal winged helix domain DYQ05_09480 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_09480 IPR003593 AAA+ ATPase domain DYQ05_09480 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09480 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_09490 IPR005835 Nucleotidyl transferase domain DYQ05_09490 IPR029044 Nucleotide-diphospho-sugar transferases DYQ05_09490 IPR011004 Trimeric LpxA-like superfamily DYQ05_09490 IPR011831 Glucose-1-phosphate adenylyltransferase DYQ05_09490 IPR005836 ADP-glucose pyrophosphorylase, conserved site DYQ05_09490 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial DYQ05_09495 IPR003593 AAA+ ATPase domain DYQ05_09495 IPR041546 ClpA/ClpB, AAA lid domain DYQ05_09495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09495 IPR036628 Clp, N-terminal domain superfamily DYQ05_09495 IPR001943 UVR domain DYQ05_09495 IPR019489 Clp ATPase, C-terminal DYQ05_09495 IPR028299 ClpA/B, conserved site 2 DYQ05_09495 IPR018368 ClpA/B, conserved site 1 DYQ05_09495 IPR004176 Clp, N-terminal DYQ05_09495 IPR001270 ClpA/B family DYQ05_09495 IPR003959 ATPase, AAA-type, core DYQ05_09500 IPR022414 ATP:guanido phosphotransferase, catalytic domain DYQ05_09500 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DYQ05_09500 IPR000749 ATP:guanido phosphotransferase DYQ05_09500 IPR022415 ATP:guanido phosphotransferase active site DYQ05_09500 IPR023660 Protein arginine kinase DYQ05_09505 IPR025542 YacH protein DYQ05_09505 IPR001510 Zinc finger, PARP-type DYQ05_09505 IPR001943 UVR domain DYQ05_09515 IPR003439 ABC transporter-like DYQ05_09515 IPR003593 AAA+ ATPase domain DYQ05_09515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09515 IPR015854 ABC transporter, lipoprotein release, LolD DYQ05_09515 IPR017871 ABC transporter, conserved site DYQ05_09520 IPR025857 MacB-like periplasmic core domain DYQ05_09520 IPR003838 ABC transporter permease protein domain DYQ05_09520 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E DYQ05_09530 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09530 IPR003593 AAA+ ATPase domain DYQ05_09530 IPR004390 Signal-recognition particle receptor FtsY DYQ05_09530 IPR036225 SRP/SRP receptor, N-terminal DYQ05_09530 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DYQ05_09530 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DYQ05_09530 IPR013822 Signal recognition particle SRP54, helical bundle DYQ05_09560 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_09560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_09560 IPR003660 HAMP domain DYQ05_09560 IPR033479 Double Cache domain 1 DYQ05_09565 IPR017937 Thioredoxin, conserved site DYQ05_09565 IPR013766 Thioredoxin domain DYQ05_09565 IPR036249 Thioredoxin-like superfamily DYQ05_09565 IPR013740 Redoxin DYQ05_09580 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09580 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_09580 IPR005225 Small GTP-binding protein domain DYQ05_09580 IPR000795 Transcription factor, GTP-binding domain DYQ05_09580 IPR031157 Tr-type G domain, conserved site DYQ05_09580 IPR009000 Translation protein, beta-barrel domain superfamily DYQ05_09580 IPR000640 Elongation factor EFG, domain V-like DYQ05_09580 IPR035649 EFG, domain V DYQ05_09580 IPR004161 Translation elongation factor EFTu-like, domain 2 DYQ05_09580 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_09580 IPR009022 Elongation factor G, domain III DYQ05_09580 IPR041095 Elongation Factor G, domain II DYQ05_09580 IPR005517 Translation elongation factor EFG/EF2, domain IV DYQ05_09580 IPR004540 Translation elongation factor EFG/EF2 DYQ05_09580 IPR035647 EF-G domain III/V-like DYQ05_09585 IPR017932 Glutamine amidotransferase type 2 domain DYQ05_09585 IPR029055 Nucleophile aminohydrolases, N-terminal DYQ05_09585 IPR000836 Phosphoribosyltransferase domain DYQ05_09585 IPR029057 Phosphoribosyltransferase-like DYQ05_09585 IPR035584 Amidophosphoribosyltransferase, N-terminal DYQ05_09585 IPR005854 Amidophosphoribosyltransferase DYQ05_09595 IPR032813 Putative Na+/H+ antiporter, N-terminal DYQ05_09595 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal DYQ05_09610 IPR000453 Chorismate synthase DYQ05_09610 IPR035904 Chorismate synthase AroC superfamily DYQ05_09615 IPR001647 DNA-binding HTH domain, TetR-type DYQ05_09615 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DYQ05_09615 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal DYQ05_09615 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DYQ05_09615 IPR009057 Homeobox-like domain superfamily DYQ05_09625 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09625 IPR017871 ABC transporter, conserved site DYQ05_09625 IPR003439 ABC transporter-like DYQ05_09625 IPR003593 AAA+ ATPase domain DYQ05_09640 IPR003593 AAA+ ATPase domain DYQ05_09640 IPR032524 ABC transporter Uup, C-terminal DYQ05_09640 IPR032781 ABC-transporter extension domain DYQ05_09640 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09640 IPR017871 ABC transporter, conserved site DYQ05_09640 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DYQ05_09640 IPR003439 ABC transporter-like DYQ05_09645 IPR003646 SH3-like domain, bacterial-type DYQ05_09655 IPR004498 Ribosomal protein L11 methyltransferase DYQ05_09655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_09670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09670 IPR003593 AAA+ ATPase domain DYQ05_09670 IPR017871 ABC transporter, conserved site DYQ05_09670 IPR003439 ABC transporter-like DYQ05_09670 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_09675 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_09675 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09675 IPR003439 ABC transporter-like DYQ05_09675 IPR003593 AAA+ ATPase domain DYQ05_09675 IPR017871 ABC transporter, conserved site DYQ05_09680 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09680 IPR017871 ABC transporter, conserved site DYQ05_09680 IPR003439 ABC transporter-like DYQ05_09680 IPR003593 AAA+ ATPase domain DYQ05_09685 IPR035906 MetI-like superfamily DYQ05_09685 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DYQ05_09685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_09690 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_09690 IPR035906 MetI-like superfamily DYQ05_09700 IPR035068 Metalloprotease TldD/PmbA, N-terminal DYQ05_09700 IPR002510 Metalloprotease TldD/PmbA DYQ05_09700 IPR036059 Metalloprotease TldD/PmbA superfamily DYQ05_09700 IPR025502 TldD DYQ05_09710 IPR036458 Sodium:dicarboxylate symporter superfamily DYQ05_09710 IPR001991 Sodium:dicarboxylate symporter DYQ05_09720 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like DYQ05_09725 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DYQ05_09725 IPR036869 Chaperone J-domain superfamily DYQ05_09725 IPR012724 Chaperone DnaJ DYQ05_09725 IPR002939 Chaperone DnaJ, C-terminal DYQ05_09725 IPR001623 DnaJ domain DYQ05_09725 IPR018253 DnaJ domain, conserved site DYQ05_09725 IPR008971 HSP40/DnaJ peptide-binding DYQ05_09725 IPR001305 Heat shock protein DnaJ, cysteine-rich domain DYQ05_09730 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily DYQ05_09730 IPR018181 Heat shock protein 70, conserved site DYQ05_09730 IPR012725 Chaperone DnaK DYQ05_09730 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily DYQ05_09730 IPR013126 Heat shock protein 70 family DYQ05_09735 IPR013805 GrpE nucleotide exchange factor, coiled-coil DYQ05_09735 IPR009012 GrpE nucleotide exchange factor, head DYQ05_09735 IPR000740 GrpE nucleotide exchange factor DYQ05_09740 IPR018089 Orotidine 5'-phosphate decarboxylase, active site DYQ05_09740 IPR011060 Ribulose-phosphate binding barrel DYQ05_09740 IPR001754 Orotidine 5'-phosphate decarboxylase domain DYQ05_09740 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 DYQ05_09740 IPR013785 Aldolase-type TIM barrel DYQ05_09745 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase DYQ05_09745 IPR016188 PurM-like, N-terminal domain DYQ05_09745 IPR010918 PurM-like, C-terminal domain DYQ05_09745 IPR036676 PurM-like, C-terminal domain superfamily DYQ05_09745 IPR036921 PurM-like, N-terminal domain superfamily DYQ05_09750 IPR041121 SDH, C-terminal DYQ05_09750 IPR011342 Shikimate dehydrogenase DYQ05_09750 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DYQ05_09750 IPR022893 Shikimate dehydrogenase family DYQ05_09750 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DYQ05_09750 IPR036291 NAD(P)-binding domain superfamily DYQ05_09765 IPR005478 Transketolase, bacterial-like DYQ05_09765 IPR005475 Transketolase-like, pyrimidine-binding domain DYQ05_09765 IPR020826 Transketolase binding site DYQ05_09765 IPR029061 Thiamin diphosphate-binding fold DYQ05_09765 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DYQ05_09765 IPR033247 Transketolase family DYQ05_09765 IPR005474 Transketolase, N-terminal DYQ05_09770 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_09770 IPR004408 Biotin--acetyl-CoA-carboxylase ligase DYQ05_09770 IPR004409 Biotin operon repressor, helix-turn-helix domain DYQ05_09770 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_09770 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DYQ05_09770 IPR013196 Helix-turn-helix, type 11 DYQ05_09770 IPR008988 Transcriptional repressor, C-terminal DYQ05_09770 IPR030855 Bifunctional ligase/repressor BirA DYQ05_09770 IPR003142 Biotin protein ligase, C-terminal DYQ05_09775 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DYQ05_09775 IPR029045 ClpP/crotonase-like domain superfamily DYQ05_09775 IPR001095 Acetyl-CoA carboxylase, alpha subunit DYQ05_09780 IPR034733 Acetyl-CoA carboxylase DYQ05_09780 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit DYQ05_09780 IPR029045 ClpP/crotonase-like domain superfamily DYQ05_09780 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DYQ05_09785 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DYQ05_09785 IPR005482 Biotin carboxylase, C-terminal DYQ05_09785 IPR016185 Pre-ATP-grasp domain superfamily DYQ05_09785 IPR011054 Rudiment single hybrid motif DYQ05_09785 IPR005481 Biotin carboxylase-like, N-terminal domain DYQ05_09785 IPR013815 ATP-grasp fold, subdomain 1 DYQ05_09785 IPR011761 ATP-grasp fold DYQ05_09785 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase DYQ05_09785 IPR011764 Biotin carboxylation domain DYQ05_09790 IPR001249 Acetyl-CoA biotin carboxyl carrier DYQ05_09790 IPR001882 Biotin-binding site DYQ05_09790 IPR011053 Single hybrid motif DYQ05_09790 IPR000089 Biotin/lipoyl attachment DYQ05_09795 IPR024906 Enoyl reductase FAD binding domain DYQ05_09795 IPR010758 Trans-2-enoyl-CoA reductase DYQ05_09795 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative DYQ05_09800 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 DYQ05_09800 IPR000794 Beta-ketoacyl synthase DYQ05_09800 IPR014031 Beta-ketoacyl synthase, C-terminal DYQ05_09800 IPR014030 Beta-ketoacyl synthase, N-terminal DYQ05_09800 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DYQ05_09800 IPR016039 Thiolase-like DYQ05_09800 IPR018201 Beta-ketoacyl synthase, active site DYQ05_09805 IPR020904 Short-chain dehydrogenase/reductase, conserved site DYQ05_09805 IPR036291 NAD(P)-binding domain superfamily DYQ05_09805 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DYQ05_09805 IPR002347 Short-chain dehydrogenase/reductase SDR DYQ05_09810 IPR024925 Malonyl CoA-acyl carrier protein transacylase DYQ05_09810 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DYQ05_09810 IPR001227 Acyl transferase domain superfamily DYQ05_09810 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DYQ05_09810 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type DYQ05_09810 IPR014043 Acyl transferase DYQ05_09815 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYQ05_09815 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DYQ05_09815 IPR016039 Thiolase-like DYQ05_09815 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DYQ05_09825 IPR029351 GAD domain DYQ05_09825 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DYQ05_09825 IPR004524 Aspartate-tRNA ligase, type 1 DYQ05_09825 IPR012340 Nucleic acid-binding, OB-fold DYQ05_09825 IPR006195 Aminoacyl-tRNA synthetase, class II DYQ05_09825 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DYQ05_09825 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DYQ05_09825 IPR004115 GAD-like domain superfamily DYQ05_09840 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB DYQ05_09840 IPR028362 Alginate O-acetyltransferase AlgI DYQ05_09840 IPR004299 Membrane bound O-acyl transferase, MBOAT DYQ05_09850 IPR010200 HflC DYQ05_09850 IPR001107 Band 7 domain DYQ05_09850 IPR036013 Band 7/SPFH domain superfamily DYQ05_09855 IPR001107 Band 7 domain DYQ05_09855 IPR036013 Band 7/SPFH domain superfamily DYQ05_09855 IPR010201 HflK DYQ05_09870 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain DYQ05_09870 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain DYQ05_09870 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily DYQ05_09870 IPR011167 Iron-dependent fumarate hydratase DYQ05_09870 IPR020557 Fumarate lyase, conserved site DYQ05_09875 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain DYQ05_09880 IPR001492 Flagellin DYQ05_09880 IPR042187 Flagellin, C-terminal domain, subdomain 2 DYQ05_09880 IPR001029 Flagellin, D0/D1 domain DYQ05_09885 IPR002545 CheW-like domain DYQ05_09885 IPR039315 Chemotaxis protein CheW DYQ05_09885 IPR036061 CheW-like domain superfamily DYQ05_09895 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DYQ05_09895 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DYQ05_09895 IPR002504 NAD kinase DYQ05_09895 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal DYQ05_09900 IPR003593 AAA+ ATPase domain DYQ05_09900 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_09900 IPR039421 Type I protein exporter DYQ05_09900 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_09900 IPR003439 ABC transporter-like DYQ05_09900 IPR017871 ABC transporter, conserved site DYQ05_09900 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_09900 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09910 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DYQ05_09910 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DYQ05_09910 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DYQ05_09910 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DYQ05_09910 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DYQ05_09910 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DYQ05_09910 IPR036291 NAD(P)-binding domain superfamily DYQ05_09915 IPR022313 Phenylalanine/histidine ammonia-lyases, active site DYQ05_09915 IPR001106 Aromatic amino acid lyase DYQ05_09915 IPR024083 Fumarase/histidase, N-terminal DYQ05_09915 IPR005921 Histidine ammonia-lyase DYQ05_09915 IPR008948 L-Aspartase-like DYQ05_09925 IPR003593 AAA+ ATPase domain DYQ05_09925 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_09925 IPR017871 ABC transporter, conserved site DYQ05_09925 IPR003439 ABC transporter-like DYQ05_09940 IPR003796 Ribonucleotide reductase regulator NrdR-like DYQ05_09940 IPR005144 ATP-cone domain DYQ05_10090 IPR006195 Aminoacyl-tRNA synthetase, class II DYQ05_10090 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DYQ05_10090 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DYQ05_10090 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type DYQ05_10090 IPR004154 Anticodon-binding DYQ05_10090 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DYQ05_10090 IPR033730 Prokaryote proline-tRNA ligase core domain DYQ05_10090 IPR036621 Anticodon-binding domain superfamily DYQ05_10090 IPR002316 Proline-tRNA ligase, class IIa DYQ05_10090 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 DYQ05_10095 IPR017871 ABC transporter, conserved site DYQ05_10095 IPR003593 AAA+ ATPase domain DYQ05_10095 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_10095 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10095 IPR003439 ABC transporter-like DYQ05_10100 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_10100 IPR017871 ABC transporter, conserved site DYQ05_10100 IPR003439 ABC transporter-like DYQ05_10100 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10100 IPR003593 AAA+ ATPase domain DYQ05_10105 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DYQ05_10105 IPR035906 MetI-like superfamily DYQ05_10105 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_10110 IPR035906 MetI-like superfamily DYQ05_10110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_10115 IPR023765 Solute-binding protein family 5, conserved site DYQ05_10115 IPR000914 Solute-binding protein family 5 domain DYQ05_10115 IPR039424 Solute-binding protein family 5 DYQ05_10115 IPR030678 Peptide/nickel binding protein, MppA-type DYQ05_10125 IPR000620 EamA domain DYQ05_10130 IPR008532 NFACT, RNA-binding domain DYQ05_10140 IPR019935 Conserved hypothetical protein CHP03546 DYQ05_10145 IPR013534 Starch synthase, catalytic domain DYQ05_10145 IPR001296 Glycosyl transferase, family 1 DYQ05_10145 IPR011835 Bacterial/plant glycogen synthase DYQ05_10155 IPR028345 Aminoglycoside 3-N-acetyltransferase-like DYQ05_10155 IPR006340 Protein of unknown function DUF436 DYQ05_10170 IPR017853 Glycoside hydrolase superfamily DYQ05_10170 IPR001764 Glycoside hydrolase, family 3, N-terminal DYQ05_10170 IPR022956 Beta-hexosaminidase, bacterial DYQ05_10170 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DYQ05_10185 IPR003593 AAA+ ATPase domain DYQ05_10185 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 DYQ05_10185 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DYQ05_10185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10185 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DYQ05_10185 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DYQ05_10185 IPR032463 ATPase, type III secretion system, FliI DYQ05_10185 IPR005714 ATPase, type III secretion system, FliI/YscN DYQ05_10185 IPR040627 T3SS EscN ATPase, C-terminal DYQ05_10190 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DYQ05_10195 IPR023087 Flagellar motor switch protein FliG, C-terminal DYQ05_10195 IPR000090 Flagellar motor switch protein FliG DYQ05_10195 IPR011002 Flagellar motor switch protein FliG, alpha-helical DYQ05_10195 IPR032779 Flagellar motor switch protein FliG, middle domain DYQ05_10195 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DYQ05_10200 IPR006182 Secretory protein YscJ/FliF DYQ05_10200 IPR013556 Flagellar M-ring C-terminal DYQ05_10200 IPR000067 Flagellar M-ring protein FliF DYQ05_10205 IPR001624 Flagellar hook-basal body complex protein FliE DYQ05_10210 IPR001444 Flagellar basal body rod protein, N-terminal DYQ05_10210 IPR019776 Flagellar basal body rod protein, conserved site DYQ05_10210 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DYQ05_10210 IPR006299 Flagellar basal-body rod protein FlgC DYQ05_10215 IPR006300 Flagellar basal-body rod protein FlgB DYQ05_10215 IPR019776 Flagellar basal body rod protein, conserved site DYQ05_10215 IPR001444 Flagellar basal body rod protein, N-terminal DYQ05_10220 IPR004491 Heat shock protein HslU DYQ05_10220 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10220 IPR019489 Clp ATPase, C-terminal DYQ05_10220 IPR003593 AAA+ ATPase domain DYQ05_10220 IPR003959 ATPase, AAA-type, core DYQ05_10225 IPR023333 Proteasome B-type subunit DYQ05_10225 IPR001353 Proteasome, subunit alpha/beta DYQ05_10225 IPR029055 Nucleophile aminohydrolases, N-terminal DYQ05_10225 IPR022281 ATP-dependent protease, HslV subunit DYQ05_10230 IPR023009 Tyrosine recombinase XerC/XerD DYQ05_10230 IPR004107 Integrase, SAM-like, N-terminal DYQ05_10230 IPR002104 Integrase, catalytic domain DYQ05_10230 IPR013762 Integrase-like, catalytic domain superfamily DYQ05_10230 IPR011010 DNA breaking-rejoining enzyme, catalytic core DYQ05_10230 IPR010998 Integrase/recombinase, N-terminal DYQ05_10235 IPR034149 DNA topoisomerase 1, TOPRIM domain DYQ05_10235 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DYQ05_10235 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DYQ05_10235 IPR006171 TOPRIM domain DYQ05_10235 IPR013497 DNA topoisomerase, type IA, central DYQ05_10235 IPR023406 DNA topoisomerase, type IA, active site DYQ05_10235 IPR003601 DNA topoisomerase, type IA, domain 2 DYQ05_10235 IPR000380 DNA topoisomerase, type IA DYQ05_10235 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DYQ05_10235 IPR023405 DNA topoisomerase, type IA, core domain DYQ05_10235 IPR003602 DNA topoisomerase, type IA, DNA-binding domain DYQ05_10235 IPR005733 DNA topoisomerase I, bacterial-type DYQ05_10235 IPR013498 DNA topoisomerase, type IA, zn finger DYQ05_10235 IPR028612 DNA topoisomerase I, type IA DYQ05_10240 IPR003488 DNA recombination-mediator protein A DYQ05_10240 IPR041614 DprA, winged helix domain DYQ05_10240 IPR010994 RuvA domain 2-like DYQ05_10240 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_10250 IPR011932 Tyrosine recombinase XerD DYQ05_10250 IPR023009 Tyrosine recombinase XerC/XerD DYQ05_10250 IPR011010 DNA breaking-rejoining enzyme, catalytic core DYQ05_10250 IPR013762 Integrase-like, catalytic domain superfamily DYQ05_10250 IPR002104 Integrase, catalytic domain DYQ05_10250 IPR004107 Integrase, SAM-like, N-terminal DYQ05_10250 IPR010998 Integrase/recombinase, N-terminal DYQ05_10255 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain DYQ05_10255 IPR008280 Tubulin/FtsZ, C-terminal DYQ05_10255 IPR024757 Cell division protein FtsZ, C-terminal DYQ05_10255 IPR020805 Cell division protein FtsZ, conserved site DYQ05_10255 IPR036525 Tubulin/FtsZ, GTPase domain superfamily DYQ05_10255 IPR003008 Tubulin/FtsZ, GTPase domain DYQ05_10255 IPR000158 Cell division protein FtsZ DYQ05_10260 IPR003494 SHS2 domain inserted in FtsA DYQ05_10260 IPR020823 Cell division protein FtsA DYQ05_10270 IPR013437 Probable peptidoglycan glycosyltransferase FtsW DYQ05_10270 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DYQ05_10270 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DYQ05_10275 IPR036565 Mur-like, catalytic domain superfamily DYQ05_10275 IPR004101 Mur ligase, C-terminal DYQ05_10275 IPR036615 Mur ligase, C-terminal domain superfamily DYQ05_10275 IPR013221 Mur ligase, central DYQ05_10275 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase DYQ05_10275 IPR035911 MurE/MurF, N-terminal DYQ05_10275 IPR000713 Mur ligase, N-terminal catalytic domain DYQ05_10290 IPR003444 Transcriptional regulator MraZ DYQ05_10290 IPR035644 MraZ, C-terminal DYQ05_10290 IPR020603 MraZ domain DYQ05_10290 IPR035642 MraZ, N-terminal DYQ05_10290 IPR038619 MraZ superfamily DYQ05_10290 IPR007159 SpoVT-AbrB domain DYQ05_10290 IPR037914 SpoVT-AbrB domain superfamily DYQ05_10300 IPR036291 NAD(P)-binding domain superfamily DYQ05_10300 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal DYQ05_10300 IPR014362 Glutamate dehydrogenase DYQ05_10300 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain DYQ05_10300 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase DYQ05_10300 IPR033524 Leu/Phe/Val dehydrogenases active site DYQ05_10300 IPR033922 NAD(P) binding domain of glutamate dehydrogenase DYQ05_10305 IPR019405 Lactonase, 7-bladed beta propeller DYQ05_10305 IPR011045 Nitrous oxide reductase, N-terminal DYQ05_10305 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DYQ05_10315 IPR011545 DEAD/DEAH box helicase domain DYQ05_10315 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_10315 IPR001650 Helicase, C-terminal DYQ05_10315 IPR014014 RNA helicase, DEAD-box type, Q motif DYQ05_10315 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DYQ05_10315 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10315 IPR030880 DEAD-box ATP-dependent RNA helicase CshA DYQ05_10325 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta DYQ05_10325 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta DYQ05_10335 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DYQ05_10335 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DYQ05_10335 IPR001498 Impact, N-terminal DYQ05_10335 IPR036956 Impact, N-terminal domain superfamily DYQ05_10335 IPR015796 Impact family, bacterial/archaeal DYQ05_10335 IPR023582 Impact family DYQ05_10335 IPR035647 EF-G domain III/V-like DYQ05_10335 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_10355 IPR000914 Solute-binding protein family 5 domain DYQ05_10355 IPR030678 Peptide/nickel binding protein, MppA-type DYQ05_10355 IPR039424 Solute-binding protein family 5 DYQ05_10355 IPR023765 Solute-binding protein family 5, conserved site DYQ05_10360 IPR035906 MetI-like superfamily DYQ05_10360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_10365 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DYQ05_10365 IPR035906 MetI-like superfamily DYQ05_10365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_10370 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10370 IPR017871 ABC transporter, conserved site DYQ05_10370 IPR003439 ABC transporter-like DYQ05_10370 IPR003593 AAA+ ATPase domain DYQ05_10370 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_10380 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DYQ05_10380 IPR013216 Methyltransferase type 11 DYQ05_10380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_10385 IPR001986 Enolpyruvate transferase domain DYQ05_10385 IPR036968 Enolpyruvate transferase domain superfamily DYQ05_10385 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DYQ05_10385 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site DYQ05_10385 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DYQ05_10395 IPR035647 EF-G domain III/V-like DYQ05_10395 IPR000640 Elongation factor EFG, domain V-like DYQ05_10395 IPR004161 Translation elongation factor EFTu-like, domain 2 DYQ05_10395 IPR006297 Elongation factor 4 DYQ05_10395 IPR013842 GTP-binding protein LepA, C-terminal DYQ05_10395 IPR035654 Elongation factor 4, domain IV DYQ05_10395 IPR005225 Small GTP-binding protein domain DYQ05_10395 IPR000795 Transcription factor, GTP-binding domain DYQ05_10395 IPR009000 Translation protein, beta-barrel domain superfamily DYQ05_10395 IPR041095 Elongation Factor G, domain II DYQ05_10395 IPR038363 LepA, C-terminal domain superfamily DYQ05_10395 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10400 IPR004467 Orotate phosphoribosyl transferase domain DYQ05_10400 IPR023031 Orotate phosphoribosyltransferase DYQ05_10400 IPR029057 Phosphoribosyltransferase-like DYQ05_10400 IPR000836 Phosphoribosyltransferase domain DYQ05_10405 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_10405 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_10405 IPR003660 HAMP domain DYQ05_10405 IPR000727 Target SNARE coiled-coil homology domain DYQ05_10405 IPR033479 Double Cache domain 1 DYQ05_10405 IPR004090 Chemotaxis methyl-accepting receptor DYQ05_10415 IPR036291 NAD(P)-binding domain superfamily DYQ05_10415 IPR026877 DXP reductoisomerase C-terminal domain DYQ05_10415 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase DYQ05_10415 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal DYQ05_10415 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal DYQ05_10415 IPR036169 DXP reductoisomerase, C-terminal domain superfamily DYQ05_10425 IPR036424 Decaprenyl diphosphate synthase-like superfamily DYQ05_10425 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site DYQ05_10425 IPR001441 Decaprenyl diphosphate synthase-like DYQ05_10430 IPR036191 RRF superfamily DYQ05_10430 IPR002661 Ribosome recycling factor DYQ05_10430 IPR023584 Ribosome recycling factor domain DYQ05_10435 IPR018101 Translation elongation factor Ts, conserved site DYQ05_10435 IPR009060 UBA-like superfamily DYQ05_10435 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation DYQ05_10435 IPR036402 Elongation factor Ts, dimerisation domain superfamily DYQ05_10435 IPR001816 Translation elongation factor EFTs/EF1B DYQ05_10440 IPR018130 Ribosomal protein S2, conserved site DYQ05_10440 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DYQ05_10440 IPR001865 Ribosomal protein S2 DYQ05_10440 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DYQ05_10475 IPR031325 RHS repeat DYQ05_10475 IPR003615 HNH nuclease DYQ05_10475 IPR008727 PAAR motif DYQ05_10475 IPR022385 Rhs repeat-associated core DYQ05_10475 IPR006530 YD repeat DYQ05_10490 IPR036302 Pyosin/cloacin translocation domain superfamily DYQ05_10490 IPR016128 Pyosin/cloacin translocation domain DYQ05_10490 IPR037178 Colicin D, C-terminal domain superfamily DYQ05_10490 IPR024440 Colicin D C-terminal DYQ05_10490 IPR038233 Colicin D/E5 nuclease domain superfamily DYQ05_10490 IPR024575 Cloacin colicin family DYQ05_10525 IPR006530 YD repeat DYQ05_10525 IPR025479 Domain of unknown function DUF4329 DYQ05_10525 IPR031325 RHS repeat DYQ05_10525 IPR001826 RHS protein DYQ05_10525 IPR022385 Rhs repeat-associated core DYQ05_10535 IPR006530 YD repeat DYQ05_10535 IPR031325 RHS repeat DYQ05_10535 IPR022385 Rhs repeat-associated core DYQ05_10535 IPR008727 PAAR motif DYQ05_10535 IPR003615 HNH nuclease DYQ05_10550 IPR003615 HNH nuclease DYQ05_10550 IPR008727 PAAR motif DYQ05_10550 IPR022385 Rhs repeat-associated core DYQ05_10550 IPR031325 RHS repeat DYQ05_10550 IPR006530 YD repeat DYQ05_10570 IPR033479 Double Cache domain 1 DYQ05_10570 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_10570 IPR003660 HAMP domain DYQ05_10570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_10585 IPR002510 Metalloprotease TldD/PmbA DYQ05_10585 IPR035068 Metalloprotease TldD/PmbA, N-terminal DYQ05_10585 IPR036059 Metalloprotease TldD/PmbA superfamily DYQ05_10590 IPR006495 Citrate lyase acyl carrier protein CitD DYQ05_10590 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DYQ05_10595 IPR040442 Pyruvate kinase-like domain superfamily DYQ05_10595 IPR006475 Citrate lyase, beta subunit, bacteria DYQ05_10595 IPR011206 Citrate lyase beta subunit-like DYQ05_10595 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DYQ05_10595 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DYQ05_10600 IPR037171 NagB/RpiA transferase-like DYQ05_10600 IPR006472 Citrate lyase, alpha subunit DYQ05_10605 IPR015191 Translation elongation factor SelB, winged helix, type 3 DYQ05_10605 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10605 IPR005225 Small GTP-binding protein domain DYQ05_10605 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_10605 IPR015190 Translation elongation factor SelB, winged helix, type 2 DYQ05_10605 IPR009000 Translation protein, beta-barrel domain superfamily DYQ05_10605 IPR000795 Transcription factor, GTP-binding domain DYQ05_10605 IPR004161 Translation elongation factor EFTu-like, domain 2 DYQ05_10605 IPR015189 Translation elongation factor SelB, winged helix, type 1 DYQ05_10605 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DYQ05_10605 IPR004535 Translation elongation factor, selenocysteine-specific DYQ05_10605 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_10615 IPR006196 RNA-binding domain, S1, IF1 type DYQ05_10615 IPR004368 Translation initiation factor IF-1 DYQ05_10615 IPR012340 Nucleic acid-binding, OB-fold DYQ05_10615 IPR022967 RNA-binding domain, S1 DYQ05_10620 IPR012724 Chaperone DnaJ DYQ05_10620 IPR018253 DnaJ domain, conserved site DYQ05_10620 IPR008971 HSP40/DnaJ peptide-binding DYQ05_10620 IPR001305 Heat shock protein DnaJ, cysteine-rich domain DYQ05_10620 IPR001623 DnaJ domain DYQ05_10620 IPR036869 Chaperone J-domain superfamily DYQ05_10620 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DYQ05_10620 IPR002939 Chaperone DnaJ, C-terminal DYQ05_10625 IPR011817 Uridylate kinase DYQ05_10625 IPR036393 Acetylglutamate kinase-like superfamily DYQ05_10625 IPR015963 Uridylate kinase, bacteria DYQ05_10625 IPR001048 Aspartate/glutamate/uridylate kinase DYQ05_10630 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DYQ05_10630 IPR008278 4'-phosphopantetheinyl transferase domain DYQ05_10630 IPR002582 Holo-[acyl carrier protein] synthase DYQ05_10630 IPR004568 Phosphopantetheine-protein transferase domain DYQ05_10640 IPR014046 Diadenylate cyclase DYQ05_10640 IPR034701 Diadenylate cyclase CdaA DYQ05_10640 IPR003390 DNA integrity scanning protein, DisA, N-terminal DYQ05_10640 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DYQ05_10645 IPR029061 Thiamin diphosphate-binding fold DYQ05_10645 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DYQ05_10645 IPR033248 Transketolase, C-terminal domain DYQ05_10645 IPR020826 Transketolase binding site DYQ05_10645 IPR005475 Transketolase-like, pyrimidine-binding domain DYQ05_10645 IPR005474 Transketolase, N-terminal DYQ05_10645 IPR005477 Deoxyxylulose-5-phosphate synthase DYQ05_10650 IPR001940 Peptidase S1C DYQ05_10650 IPR009003 Peptidase S1, PA clan DYQ05_10650 IPR011782 Peptidase S1C, Do DYQ05_10650 IPR036034 PDZ superfamily DYQ05_10650 IPR041489 PDZ domain 6 DYQ05_10650 IPR001478 PDZ domain DYQ05_10655 IPR029001 Inosine triphosphate pyrophosphatase-like DYQ05_10655 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DYQ05_10660 IPR011989 Armadillo-like helical DYQ05_10660 IPR016024 Armadillo-type fold DYQ05_10670 IPR001492 Flagellin DYQ05_10670 IPR001029 Flagellin, D0/D1 domain DYQ05_10675 IPR001492 Flagellin DYQ05_10675 IPR001029 Flagellin, D0/D1 domain DYQ05_10680 IPR035924 FlaG-like superfamily DYQ05_10680 IPR005186 FlaG protein DYQ05_10685 IPR003481 Flagellar hook-associated protein 2, N-terminal DYQ05_10685 IPR010809 Flagellar hook-associated protein 2, C-terminal DYQ05_10685 IPR040026 Flagellar hook-associated protein 2 DYQ05_10700 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10700 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE DYQ05_10710 IPR001789 Signal transduction response regulator, receiver domain DYQ05_10710 IPR037522 HD-GYP domain DYQ05_10710 IPR003607 HD/PDEase domain DYQ05_10710 IPR011006 CheY-like superfamily DYQ05_10715 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DYQ05_10715 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DYQ05_10715 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DYQ05_10715 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DYQ05_10715 IPR005841 Alpha-D-phosphohexomutase superfamily DYQ05_10715 IPR016066 Alpha-D-phosphohexomutase, conserved site DYQ05_10715 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DYQ05_10715 IPR005843 Alpha-D-phosphohexomutase, C-terminal DYQ05_10720 IPR036397 Ribonuclease H superfamily DYQ05_10720 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain DYQ05_10720 IPR013520 Exonuclease, RNase T/DNA polymerase III DYQ05_10720 IPR012337 Ribonuclease H-like superfamily DYQ05_10725 IPR002197 DNA binding HTH domain, Fis-type DYQ05_10725 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DYQ05_10725 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DYQ05_10725 IPR002078 RNA polymerase sigma factor 54 interaction domain DYQ05_10725 IPR001789 Signal transduction response regulator, receiver domain DYQ05_10725 IPR025944 Sigma-54 interaction domain, conserved site DYQ05_10725 IPR009057 Homeobox-like domain superfamily DYQ05_10725 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10725 IPR011006 CheY-like superfamily DYQ05_10725 IPR003593 AAA+ ATPase domain DYQ05_10735 IPR002125 Cytidine and deoxycytidylate deaminase domain DYQ05_10735 IPR006262 Cytidine deaminase, homotetrameric DYQ05_10735 IPR016193 Cytidine deaminase-like DYQ05_10740 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like DYQ05_10785 IPR027608 Spirochetes SPASM protein DYQ05_10785 IPR023885 4Fe4S-binding SPASM domain DYQ05_10800 IPR002579 Peptide methionine sulphoxide reductase MrsB DYQ05_10800 IPR011057 Mss4-like superfamily DYQ05_10800 IPR028427 Peptide methionine sulfoxide reductase DYQ05_10800 IPR002569 Peptide methionine sulphoxide reductase MsrA DYQ05_10800 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily DYQ05_10810 IPR003775 Flagellar assembly factor FliW DYQ05_10810 IPR024046 Flagellar assembly factor FliW domain superfamily DYQ05_10815 IPR003751 Translational regulator CsrA DYQ05_10815 IPR036107 Carbon storage regulator superfamily DYQ05_10820 IPR008875 TraX DYQ05_10825 IPR024109 Tryptophan-tRNA ligase, bacterial-type DYQ05_10825 IPR002305 Aminoacyl-tRNA synthetase, class Ic DYQ05_10825 IPR002306 Tryptophan-tRNA ligase DYQ05_10825 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DYQ05_10825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_10835 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DYQ05_10835 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DYQ05_10835 IPR036280 Multiheme cytochrome superfamily DYQ05_10835 IPR011031 Multihaem cytochrome DYQ05_10835 IPR010960 Flavocytochrome c DYQ05_10835 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_10835 IPR012286 Tetrahaem cytochrome domain DYQ05_10865 IPR003593 AAA+ ATPase domain DYQ05_10865 IPR004482 Mg chelatase-related protein DYQ05_10865 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_10865 IPR025158 Mg chelatase-related protein, C-terminal domain DYQ05_10865 IPR000523 Magnesium chelatase ChlI domain DYQ05_10865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_10865 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_10870 IPR011540 AbgT, Proteobacteria DYQ05_10870 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT DYQ05_10875 IPR011990 Tetratricopeptide-like helical domain superfamily DYQ05_10880 IPR011005 Dihydropteroate synthase-like DYQ05_10880 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type DYQ05_10880 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial DYQ05_10900 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B DYQ05_10900 IPR023753 FAD/NAD(P)-binding domain DYQ05_10900 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_10900 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DYQ05_10900 IPR007419 BFD-like [2Fe-2S]-binding domain DYQ05_10905 IPR006076 FAD dependent oxidoreductase DYQ05_10905 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_10910 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DYQ05_10910 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DYQ05_10910 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DYQ05_10910 IPR019776 Flagellar basal body rod protein, conserved site DYQ05_10910 IPR001444 Flagellar basal body rod protein, N-terminal DYQ05_10910 IPR012834 Flagellar basal-body rod FlgG DYQ05_10915 IPR018484 Carbohydrate kinase, FGGY, N-terminal DYQ05_10915 IPR005999 Glycerol kinase DYQ05_10915 IPR018485 Carbohydrate kinase, FGGY, C-terminal DYQ05_10915 IPR018483 Carbohydrate kinase, FGGY, conserved site DYQ05_10915 IPR000577 Carbohydrate kinase, FGGY DYQ05_10930 IPR006027 NusB/RsmB/TIM44 DYQ05_10930 IPR035926 NusB-like superfamily DYQ05_10930 IPR011605 NusB antitermination factor DYQ05_10935 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DYQ05_10935 IPR027304 Trigger factor/SurA domain superfamily DYQ05_10940 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria DYQ05_10940 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily DYQ05_10940 IPR002318 Alanine-tRNA ligase, class IIc DYQ05_10940 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DYQ05_10940 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DYQ05_10940 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal DYQ05_10940 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain DYQ05_10970 IPR018171 Peptidyl-tRNA hydrolase, conserved site DYQ05_10970 IPR036416 Peptidyl-tRNA hydrolase superfamily DYQ05_10970 IPR001328 Peptidyl-tRNA hydrolase DYQ05_10980 IPR036918 Pyruvate kinase, C-terminal domain superfamily DYQ05_10980 IPR015806 Pyruvate kinase, insert domain superfamily DYQ05_10980 IPR015793 Pyruvate kinase, barrel DYQ05_10980 IPR011037 Pyruvate kinase-like, insert domain superfamily DYQ05_10980 IPR040442 Pyruvate kinase-like domain superfamily DYQ05_10980 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DYQ05_10980 IPR001697 Pyruvate kinase DYQ05_10980 IPR008279 PEP-utilising enzyme, mobile domain DYQ05_10980 IPR015795 Pyruvate kinase, C-terminal DYQ05_10980 IPR036637 Phosphohistidine domain superfamily DYQ05_10985 IPR011042 Six-bladed beta-propeller, TolB-like DYQ05_10985 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DYQ05_10985 IPR029058 Alpha/Beta hydrolase fold DYQ05_11000 IPR002376 Formyl transferase, N-terminal DYQ05_11000 IPR036477 Formyl transferase, N-terminal domain superfamily DYQ05_11000 IPR004607 Phosphoribosylglycinamide formyltransferase DYQ05_11000 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DYQ05_11035 IPR011130 SecA, preprotein cross-linking domain DYQ05_11035 IPR011116 SecA Wing/Scaffold DYQ05_11035 IPR011115 SecA DEAD-like, N-terminal DYQ05_11035 IPR020937 SecA conserved site DYQ05_11035 IPR000185 Protein translocase subunit SecA DYQ05_11035 IPR004027 SEC-C motif DYQ05_11035 IPR036266 SecA, Wing/Scaffold superfamily DYQ05_11035 IPR036670 SecA, preprotein cross-linking domain superfamily DYQ05_11035 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11035 IPR014018 SecA motor DEAD DYQ05_11040 IPR018631 AAA-ATPase-like domain DYQ05_11040 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_11050 IPR012292 Globin/Protoglobin DYQ05_11050 IPR009050 Globin-like superfamily DYQ05_11050 IPR000160 GGDEF domain DYQ05_11050 IPR029787 Nucleotide cyclase DYQ05_11050 IPR039435 Diguanylate cyclase DosC, globin sensor domain DYQ05_11075 IPR013976 Metal-dependent hydrolase HDOD DYQ05_11085 IPR018490 Cyclic nucleotide-binding-like DYQ05_11085 IPR018488 Cyclic nucleotide-binding, conserved site DYQ05_11085 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_11085 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_11085 IPR014710 RmlC-like jelly roll fold DYQ05_11085 IPR012318 Crp-type HTH domain DYQ05_11085 IPR000595 Cyclic nucleotide-binding domain DYQ05_11090 IPR001872 Peptidase A8, signal peptidase II DYQ05_11095 IPR024932 Flavin transferase ApbE DYQ05_11095 IPR003374 ApbE-like superfamily DYQ05_11095 IPR042159 Flavin-trafficking protein ApbE DYQ05_11100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_11100 IPR030390 RNA methyltransferase TrmA, active site DYQ05_11100 IPR010280 (Uracil-5)-methyltransferase family DYQ05_11100 IPR012340 Nucleic acid-binding, OB-fold DYQ05_11140 IPR042095 Sulfatase-modifying factor enzyme superfamily DYQ05_11140 IPR005532 Sulfatase-modifying factor enzyme DYQ05_11140 IPR016187 C-type lectin fold DYQ05_11145 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DYQ05_11145 IPR023753 FAD/NAD(P)-binding domain DYQ05_11145 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_11145 IPR017701 Putative selenate reductase YgfK DYQ05_11145 IPR028261 Dihydroprymidine dehydrogenase domain II DYQ05_11145 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DYQ05_11145 IPR009051 Alpha-helical ferredoxin DYQ05_11150 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DYQ05_11150 IPR009016 Iron hydrogenase DYQ05_11150 IPR036010 2Fe-2S ferredoxin-like superfamily DYQ05_11150 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DYQ05_11150 IPR003149 Iron hydrogenase, small subunit DYQ05_11150 IPR004108 Iron hydrogenase, large subunit, C-terminal DYQ05_11150 IPR013352 Iron hydrogenase, subset DYQ05_11150 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DYQ05_11150 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DYQ05_11150 IPR036991 Iron hydrogenase, small subunit superfamily DYQ05_11155 IPR005839 Methylthiotransferase DYQ05_11155 IPR020612 Methylthiotransferase, conserved site DYQ05_11155 IPR038135 Methylthiotransferase, N-terminal domain superfamily DYQ05_11155 IPR006638 Elp3/MiaB/NifB DYQ05_11155 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB DYQ05_11155 IPR023404 Radical SAM, alpha/beta horseshoe DYQ05_11155 IPR002792 TRAM domain DYQ05_11155 IPR013848 Methylthiotransferase, N-terminal DYQ05_11155 IPR007197 Radical SAM DYQ05_11160 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase DYQ05_11160 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DYQ05_11160 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DYQ05_11160 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site DYQ05_11160 IPR036291 NAD(P)-binding domain superfamily DYQ05_11165 IPR002751 Metal transport protein CbiM/NikMN DYQ05_11165 IPR018024 Cobalamin (vitamin B12) transport protein CbiM DYQ05_11175 IPR011559 Initiation factor 2B alpha/beta/delta DYQ05_11175 IPR000649 Initiation factor 2B-related DYQ05_11175 IPR005251 Methylthioribose-1-phosphate isomerase DYQ05_11175 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal DYQ05_11175 IPR037171 NagB/RpiA transferase-like DYQ05_11195 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DYQ05_11195 IPR027409 GroEL-like apical domain superfamily DYQ05_11195 IPR001844 Chaperonin Cpn60 DYQ05_11195 IPR027413 GroEL-like equatorial domain superfamily DYQ05_11195 IPR018370 Chaperonin Cpn60, conserved site DYQ05_11195 IPR002423 Chaperonin Cpn60/TCP-1 family DYQ05_11205 IPR038690 NusG, domain 2 superfamily DYQ05_11205 IPR024045 NusG, domain 2 DYQ05_11210 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11210 IPR017871 ABC transporter, conserved site DYQ05_11210 IPR025857 MacB-like periplasmic core domain DYQ05_11210 IPR003439 ABC transporter-like DYQ05_11210 IPR003838 ABC transporter permease protein domain DYQ05_11210 IPR003593 AAA+ ATPase domain DYQ05_11210 IPR017911 ABC transporter, macrolide export, ATP-binding domain DYQ05_11215 IPR001539 Peptidase U32 DYQ05_11215 IPR032525 Peptidase family U32, C-terminal DYQ05_11220 IPR033140 Lipase, GDXG, putative serine active site DYQ05_11220 IPR002168 Lipase, GDXG, putative histidine active site DYQ05_11220 IPR013094 Alpha/beta hydrolase fold-3 DYQ05_11220 IPR029058 Alpha/Beta hydrolase fold DYQ05_11225 IPR003593 AAA+ ATPase domain DYQ05_11225 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_11225 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_11225 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11225 IPR003439 ABC transporter-like DYQ05_11225 IPR039421 Type I protein exporter DYQ05_11225 IPR017871 ABC transporter, conserved site DYQ05_11240 IPR018631 AAA-ATPase-like domain DYQ05_11240 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_11250 IPR003593 AAA+ ATPase domain DYQ05_11250 IPR003439 ABC transporter-like DYQ05_11250 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11265 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase DYQ05_11265 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DYQ05_11265 IPR036968 Enolpyruvate transferase domain superfamily DYQ05_11265 IPR001986 Enolpyruvate transferase domain DYQ05_11270 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DYQ05_11270 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_11270 IPR041166 LapB, rubredoxin metal binding domain DYQ05_11270 IPR003593 AAA+ ATPase domain DYQ05_11270 IPR004504 DNA repair protein RadA DYQ05_11270 IPR014774 KaiC-like domain DYQ05_11270 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11270 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_11320 IPR003593 AAA+ ATPase domain DYQ05_11320 IPR017871 ABC transporter, conserved site DYQ05_11320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11320 IPR003439 ABC transporter-like DYQ05_11325 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DYQ05_11325 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DYQ05_11325 IPR005665 Protein-export membrane protein SecF, bacterial DYQ05_11330 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DYQ05_11330 IPR005791 Protein translocase subunit SecD DYQ05_11330 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DYQ05_11335 IPR003849 Preprotein translocase YajC DYQ05_11340 IPR011332 Zinc-binding ribosomal protein DYQ05_11340 IPR002677 Ribosomal protein L32p DYQ05_11345 IPR009081 Phosphopantetheine binding ACP domain DYQ05_11345 IPR003231 Acyl carrier protein (ACP) DYQ05_11345 IPR036736 ACP-like superfamily DYQ05_11350 IPR011907 Ribonuclease III DYQ05_11350 IPR036389 Ribonuclease III, endonuclease domain superfamily DYQ05_11350 IPR000999 Ribonuclease III domain DYQ05_11350 IPR014720 Double-stranded RNA-binding domain DYQ05_11355 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain DYQ05_11355 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily DYQ05_11355 IPR041236 Primosomal protein N, C-terminal domain DYQ05_11355 IPR041222 Primosomal protein N', 3' DNA-binding domain DYQ05_11355 IPR005259 Primosomal protein N' DYQ05_11355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11355 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_11355 IPR011545 DEAD/DEAH box helicase domain DYQ05_11355 IPR001650 Helicase, C-terminal DYQ05_11360 IPR005273 Uracil-DNA glycosylase family 4 DYQ05_11360 IPR005122 Uracil-DNA glycosylase-like DYQ05_11360 IPR036895 Uracil-DNA glycosylase-like domain superfamily DYQ05_11370 IPR002307 Tyrosine-tRNA ligase DYQ05_11370 IPR036986 RNA-binding S4 domain superfamily DYQ05_11370 IPR002942 RNA-binding S4 domain DYQ05_11370 IPR024088 Tyrosine-tRNA ligase, bacterial-type DYQ05_11370 IPR002305 Aminoacyl-tRNA synthetase, class Ic DYQ05_11370 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DYQ05_11370 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 DYQ05_11370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_11375 IPR006259 Adenylate kinase subfamily DYQ05_11375 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11375 IPR000850 Adenylate kinase/UMP-CMP kinase DYQ05_11375 IPR033690 Adenylate kinase, conserved site DYQ05_11375 IPR007862 Adenylate kinase, active site lid domain DYQ05_11395 IPR016047 Peptidase M23 DYQ05_11395 IPR007340 Opacity-associated protein A DYQ05_11395 IPR011055 Duplicated hybrid motif DYQ05_11415 IPR042229 Listeria-Bacteroides repeat domain superfamily DYQ05_11415 IPR025883 Cadherin-like beta sandwich domain DYQ05_11415 IPR013378 Listeria/Bacterioides repeat DYQ05_11430 IPR004807 UvrABC system, subunit B DYQ05_11430 IPR036876 UVR domain superfamily DYQ05_11430 IPR006935 Helicase/UvrB, N-terminal DYQ05_11430 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_11430 IPR001650 Helicase, C-terminal DYQ05_11430 IPR024759 UvrB, YAD/RRR-motif-containing domain DYQ05_11430 IPR041471 UvrB, interaction domain DYQ05_11430 IPR001943 UVR domain DYQ05_11430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11435 IPR042105 Ribosomal protein L31 superfamily DYQ05_11435 IPR034704 L28p-like DYQ05_11435 IPR002150 Ribosomal protein L31 DYQ05_11435 IPR027491 Ribosomal protein L31 type A DYQ05_11450 IPR008948 L-Aspartase-like DYQ05_11450 IPR022761 Fumarate lyase, N-terminal DYQ05_11450 IPR000362 Fumarate lyase family DYQ05_11450 IPR020557 Fumarate lyase, conserved site DYQ05_11450 IPR018951 Fumarase C, C-terminal DYQ05_11450 IPR024083 Fumarase/histidase, N-terminal DYQ05_11450 IPR004708 Aspartate ammonia-lyase DYQ05_11455 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_11455 IPR018631 AAA-ATPase-like domain DYQ05_11460 IPR036101 CarD-like/TRCF domain superfamily DYQ05_11460 IPR041471 UvrB, interaction domain DYQ05_11460 IPR003711 CarD-like/TRCF domain DYQ05_11460 IPR004576 Transcription-repair coupling factor DYQ05_11460 IPR011545 DEAD/DEAH box helicase domain DYQ05_11460 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_11460 IPR001650 Helicase, C-terminal DYQ05_11460 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11460 IPR037235 TRCF-like, C-terminal domain DYQ05_11460 IPR005118 Transcription-repair-coupling factor, C-terminal domain DYQ05_11475 IPR001757 P-type ATPase DYQ05_11475 IPR027256 P-type ATPase, subfamily IB DYQ05_11475 IPR036163 Heavy metal-associated domain superfamily DYQ05_11475 IPR036412 HAD-like superfamily DYQ05_11475 IPR006121 Heavy metal-associated domain, HMA DYQ05_11475 IPR017969 Heavy-metal-associated, conserved site DYQ05_11475 IPR023298 P-type ATPase, transmembrane domain superfamily DYQ05_11475 IPR023214 HAD superfamily DYQ05_11475 IPR018303 P-type ATPase, phosphorylation site DYQ05_11475 IPR008250 P-type ATPase, A domain superfamily DYQ05_11475 IPR023299 P-type ATPase, cytoplasmic domain N DYQ05_11480 IPR011991 ArsR-like helix-turn-helix domain DYQ05_11480 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_11480 IPR018334 ArsR-type transcription regulator, HTH motif DYQ05_11480 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_11480 IPR001845 HTH ArsR-type DNA-binding domain DYQ05_11485 IPR009875 PilZ domain DYQ05_11495 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_11495 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_11495 IPR003593 AAA+ ATPase domain DYQ05_11495 IPR039421 Type I protein exporter DYQ05_11495 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11495 IPR017871 ABC transporter, conserved site DYQ05_11495 IPR003439 ABC transporter-like DYQ05_11500 IPR029028 Alpha/beta knot methyltransferases DYQ05_11500 IPR004384 RNA methyltransferase TrmJ/LasT DYQ05_11500 IPR001537 tRNA/rRNA methyltransferase, SpoU type DYQ05_11500 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DYQ05_11505 IPR021800 Domain of unknown function DUF3369 DYQ05_11505 IPR037522 HD-GYP domain DYQ05_11505 IPR003607 HD/PDEase domain DYQ05_11505 IPR001789 Signal transduction response regulator, receiver domain DYQ05_11505 IPR011006 CheY-like superfamily DYQ05_11510 IPR018319 L-seryl-tRNA selenium transferase-like DYQ05_11510 IPR015424 Pyridoxal phosphate-dependent transferase DYQ05_11510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DYQ05_11510 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain DYQ05_11510 IPR004534 L-seryl-tRNA(Sec) selenium transferase DYQ05_11515 IPR024904 Ornithine carbamoyltransferase DYQ05_11515 IPR002292 Ornithine/putrescine carbamoyltransferase DYQ05_11515 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DYQ05_11515 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DYQ05_11515 IPR006130 Aspartate/ornithine carbamoyltransferase DYQ05_11515 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DYQ05_11525 IPR010994 RuvA domain 2-like DYQ05_11525 IPR025657 RadC-like JAB domain DYQ05_11525 IPR037518 MPN domain DYQ05_11525 IPR041663 DisA/LigA, helix-hairpin-helix motif DYQ05_11525 IPR001405 Uncharacterised protein family UPF0758 DYQ05_11525 IPR020891 Uncharacterised protein family UPF0758, conserved site DYQ05_11535 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DYQ05_11535 IPR023555 Thiol-disulphide oxidoreductase ResA DYQ05_11535 IPR036249 Thioredoxin-like superfamily DYQ05_11535 IPR013766 Thioredoxin domain DYQ05_11540 IPR007329 FMN-binding DYQ05_11540 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DYQ05_11540 IPR011399 Nitrous oxide reductase expression regulator NosR DYQ05_11545 IPR003593 AAA+ ATPase domain DYQ05_11545 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_11545 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_11545 IPR003439 ABC transporter-like DYQ05_11545 IPR017871 ABC transporter, conserved site DYQ05_11545 IPR039421 Type I protein exporter DYQ05_11545 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11550 IPR019734 Tetratricopeptide repeat DYQ05_11550 IPR013026 Tetratricopeptide repeat-containing domain DYQ05_11550 IPR011990 Tetratricopeptide-like helical domain superfamily DYQ05_11575 IPR004276 Glycosyltransferase family 28, N-terminal domain DYQ05_11575 IPR007235 Glycosyl transferase, family 28, C-terminal DYQ05_11575 IPR006009 N-acetylglucosaminyltransferase, MurG DYQ05_11585 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DYQ05_11585 IPR009057 Homeobox-like domain superfamily DYQ05_11585 IPR001647 DNA-binding HTH domain, TetR-type DYQ05_11585 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DYQ05_11585 IPR013572 Transcription regulator MAATS, C-terminal DYQ05_11590 IPR017927 FAD-binding domain, ferredoxin reductase-type DYQ05_11590 IPR003593 AAA+ ATPase domain DYQ05_11590 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_11590 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_11590 IPR003439 ABC transporter-like DYQ05_11590 IPR007037 Siderophore-interacting protein, C-terminal domain DYQ05_11590 IPR017871 ABC transporter, conserved site DYQ05_11590 IPR013113 FAD-binding 9, siderophore-interacting DYQ05_11590 IPR017938 Riboflavin synthase-like beta-barrel DYQ05_11590 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DYQ05_11590 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11620 IPR000182 GNAT domain DYQ05_11620 IPR016181 Acyl-CoA N-acyltransferase DYQ05_11745 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DYQ05_11745 IPR013785 Aldolase-type TIM barrel DYQ05_11745 IPR023663 NADPH dehydrogenase DYQ05_11795 IPR002942 RNA-binding S4 domain DYQ05_11795 IPR006145 Pseudouridine synthase, RsuA/RluA DYQ05_11795 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DYQ05_11795 IPR006225 Pseudouridine synthase, RluC/RluD DYQ05_11795 IPR020103 Pseudouridine synthase, catalytic domain superfamily DYQ05_11795 IPR036986 RNA-binding S4 domain superfamily DYQ05_11810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DYQ05_11810 IPR009051 Alpha-helical ferredoxin DYQ05_11810 IPR019554 Soluble ligand binding domain DYQ05_11810 IPR026902 RnfC Barrel sandwich hybrid domain DYQ05_11810 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DYQ05_11810 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DYQ05_11810 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC DYQ05_11810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DYQ05_11840 IPR036995 Methylpurine-DNA glycosylase superfamily DYQ05_11840 IPR003180 Methylpurine-DNA glycosylase DYQ05_11840 IPR011034 Formyl transferase-like, C-terminal domain superfamily DYQ05_11860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_11860 IPR035906 MetI-like superfamily DYQ05_11865 IPR003593 AAA+ ATPase domain DYQ05_11865 IPR017871 ABC transporter, conserved site DYQ05_11865 IPR005116 Transport-associated OB, type 1 DYQ05_11865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11865 IPR008995 Molybdate/tungstate binding, C-terminal DYQ05_11865 IPR040582 MalK, OB fold domain DYQ05_11865 IPR003439 ABC transporter-like DYQ05_11870 IPR017853 Glycoside hydrolase superfamily DYQ05_11870 IPR003385 Glycoside hydrolase, family 77 DYQ05_11875 IPR003593 AAA+ ATPase domain DYQ05_11875 IPR039421 Type I protein exporter DYQ05_11875 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11875 IPR017871 ABC transporter, conserved site DYQ05_11875 IPR003439 ABC transporter-like DYQ05_11875 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_11875 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_11880 IPR003593 AAA+ ATPase domain DYQ05_11880 IPR017871 ABC transporter, conserved site DYQ05_11880 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_11880 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_11880 IPR003439 ABC transporter-like DYQ05_11880 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11880 IPR039421 Type I protein exporter DYQ05_11885 IPR035956 RimP, N-terminal domain superfamily DYQ05_11885 IPR003728 Ribosome maturation factor RimP DYQ05_11885 IPR028989 Ribosome maturation factor RimP, N-terminal DYQ05_11885 IPR028998 Ribosome maturation factor RimP, C-terminal DYQ05_11885 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DYQ05_11890 IPR015946 K homology domain-like, alpha/beta DYQ05_11890 IPR004087 K Homology domain DYQ05_11890 IPR013735 Transcription factor NusA, N-terminal DYQ05_11890 IPR003029 S1 domain DYQ05_11890 IPR010213 Transcription termination factor NusA DYQ05_11890 IPR036555 NusA, N-terminal domain superfamily DYQ05_11890 IPR030842 Transcription termination/antitermination protein NusA, bacterial DYQ05_11890 IPR012340 Nucleic acid-binding, OB-fold DYQ05_11890 IPR009019 K homology domain superfamily, prokaryotic type DYQ05_11890 IPR025249 KH domain, NusA-like DYQ05_11890 IPR022967 RNA-binding domain, S1 DYQ05_11895 IPR009000 Translation protein, beta-barrel domain superfamily DYQ05_11895 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DYQ05_11895 IPR023115 Translation initiation factor IF- 2, domain 3 DYQ05_11895 IPR015760 Translation initiation factor IF- 2 DYQ05_11895 IPR000178 Translation initiation factor aIF-2, bacterial-like DYQ05_11895 IPR005225 Small GTP-binding protein domain DYQ05_11895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11895 IPR006847 Translation initiation factor IF-2, N-terminal DYQ05_11895 IPR000795 Transcription factor, GTP-binding domain DYQ05_11900 IPR020053 Ribosome-binding factor A, conserved site DYQ05_11900 IPR000238 Ribosome-binding factor A DYQ05_11900 IPR015946 K homology domain-like, alpha/beta DYQ05_11900 IPR023799 Ribosome-binding factor A domain superfamily DYQ05_11905 IPR014780 tRNA pseudouridine synthase II, TruB DYQ05_11905 IPR002501 Pseudouridine synthase II, N-terminal DYQ05_11905 IPR020103 Pseudouridine synthase, catalytic domain superfamily DYQ05_11920 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DYQ05_11920 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11920 IPR004400 Urease accessory protein UreG DYQ05_11925 IPR006032 Ribosomal protein S12/S23 DYQ05_11925 IPR012340 Nucleic acid-binding, OB-fold DYQ05_11925 IPR005679 Ribosomal protein S12, bacterial-type DYQ05_11930 IPR005717 Ribosomal protein S7, bacterial/organellar-type DYQ05_11930 IPR000235 Ribosomal protein S5/S7 DYQ05_11930 IPR036823 Ribosomal protein S7 domain superfamily DYQ05_11930 IPR023798 Ribosomal protein S7 domain DYQ05_11930 IPR020606 Ribosomal protein S7, conserved site DYQ05_11935 IPR038765 Papain-like cysteine peptidase superfamily DYQ05_11935 IPR000064 Endopeptidase, NLPC/P60 domain DYQ05_11940 IPR000873 AMP-dependent synthetase/ligase DYQ05_11940 IPR020459 AMP-binding DYQ05_11940 IPR025110 AMP-binding enzyme, C-terminal domain DYQ05_11940 IPR020845 AMP-binding, conserved site DYQ05_11940 IPR042099 AMP-dependent synthetase-like superfamily DYQ05_11985 IPR003593 AAA+ ATPase domain DYQ05_11985 IPR003439 ABC transporter-like DYQ05_11985 IPR017871 ABC transporter, conserved site DYQ05_11985 IPR015861 ABC transporter, ribose import, RbsA DYQ05_11985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_11990 IPR024258 Protein of unknown function DUF3798 DYQ05_12005 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DYQ05_12005 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DYQ05_12020 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DYQ05_12020 IPR018027 Asn/Gln amidotransferase DYQ05_12020 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic DYQ05_12020 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like DYQ05_12020 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 DYQ05_12020 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 DYQ05_12020 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site DYQ05_12020 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E DYQ05_12020 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit DYQ05_12025 IPR036291 NAD(P)-binding domain superfamily DYQ05_12025 IPR020904 Short-chain dehydrogenase/reductase, conserved site DYQ05_12025 IPR002347 Short-chain dehydrogenase/reductase SDR DYQ05_12030 IPR036551 Flavin prenyltransferase-like DYQ05_12030 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal DYQ05_12030 IPR035929 CoaB-like superfamily DYQ05_12030 IPR003382 Flavoprotein DYQ05_12030 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC DYQ05_12050 IPR023353 LemA-like domain superfamily DYQ05_12050 IPR007156 LemA DYQ05_12055 IPR028923 SAICAR synthetase/ADE2, N-terminal DYQ05_12055 IPR018236 SAICAR synthetase, conserved site DYQ05_12060 IPR024694 PurE, prokaryotic type DYQ05_12060 IPR035893 PurE domain superfamily DYQ05_12060 IPR000031 PurE domain DYQ05_12060 IPR033626 Class II PurE DYQ05_12075 IPR017871 ABC transporter, conserved site DYQ05_12075 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12075 IPR003593 AAA+ ATPase domain DYQ05_12075 IPR039421 Type I protein exporter DYQ05_12075 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_12075 IPR003439 ABC transporter-like DYQ05_12075 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_12080 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12080 IPR017871 ABC transporter, conserved site DYQ05_12080 IPR039421 Type I protein exporter DYQ05_12080 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_12080 IPR003593 AAA+ ATPase domain DYQ05_12080 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_12080 IPR003439 ABC transporter-like DYQ05_12100 IPR011990 Tetratricopeptide-like helical domain superfamily DYQ05_12105 IPR006664 Outer membrane protein, bacterial DYQ05_12105 IPR006665 OmpA-like domain DYQ05_12105 IPR006690 Outer membrane protein, OmpA-like, conserved site DYQ05_12105 IPR036737 OmpA-like domain superfamily DYQ05_12110 IPR036779 LysM domain superfamily DYQ05_12110 IPR018392 LysM domain DYQ05_12110 IPR038765 Papain-like cysteine peptidase superfamily DYQ05_12110 IPR003646 SH3-like domain, bacterial-type DYQ05_12110 IPR000064 Endopeptidase, NLPC/P60 domain DYQ05_12125 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_12125 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12125 IPR017871 ABC transporter, conserved site DYQ05_12125 IPR003439 ABC transporter-like DYQ05_12125 IPR003593 AAA+ ATPase domain DYQ05_12130 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12130 IPR017871 ABC transporter, conserved site DYQ05_12130 IPR003593 AAA+ ATPase domain DYQ05_12130 IPR003439 ABC transporter-like DYQ05_12130 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DYQ05_12135 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DYQ05_12135 IPR035906 MetI-like superfamily DYQ05_12135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_12140 IPR035906 MetI-like superfamily DYQ05_12140 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_12150 IPR029058 Alpha/Beta hydrolase fold DYQ05_12150 IPR023302 Peptidase S9A, N-terminal domain DYQ05_12150 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain DYQ05_12150 IPR002470 Peptidase S9A, prolyl oligopeptidase DYQ05_12150 IPR002471 Peptidase S9, serine active site DYQ05_12170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DYQ05_12170 IPR001980 Phosphopantetheine adenylyltransferase DYQ05_12170 IPR004821 Cytidyltransferase-like domain DYQ05_12195 IPR002646 Poly A polymerase, head domain DYQ05_12195 IPR010206 Poly(A) polymerase I DYQ05_12195 IPR025866 Polymerase A arginine-rich C-terminal domain DYQ05_12195 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DYQ05_12220 IPR003607 HD/PDEase domain DYQ05_12220 IPR006674 HD domain DYQ05_12230 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ DYQ05_12230 IPR029062 Class I glutamine amidotransferase-like DYQ05_12230 IPR017926 Glutamine amidotransferase DYQ05_12235 IPR003445 Cation transporter DYQ05_12235 IPR004772 TrkH potassium transport family DYQ05_12240 IPR003148 Regulator of K+ conductance, N-terminal DYQ05_12240 IPR036291 NAD(P)-binding domain superfamily DYQ05_12240 IPR006037 Regulator of K+ conductance, C-terminal DYQ05_12240 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DYQ05_12265 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DYQ05_12265 IPR001608 Alanine racemase, N-terminal DYQ05_12265 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DYQ05_12265 IPR011079 Alanine racemase, C-terminal DYQ05_12265 IPR000821 Alanine racemase DYQ05_12265 IPR029066 PLP-binding barrel DYQ05_12270 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase DYQ05_12275 IPR036908 RlpA-like domain superfamily DYQ05_12275 IPR034718 Endolytic peptidoglycan transglycosylase RlpA DYQ05_12275 IPR012997 Rare lipoprotein A DYQ05_12275 IPR009009 RlpA-like protein, double-psi beta-barrel domain DYQ05_12280 IPR019815 Translation initiation factor 3, C-terminal DYQ05_12280 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily DYQ05_12280 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily DYQ05_12280 IPR019814 Translation initiation factor 3, N-terminal DYQ05_12280 IPR001288 Translation initiation factor 3 DYQ05_12280 IPR019813 Translation initiation factor 3, conserved site DYQ05_12285 IPR037229 Ribosomal protein L35 superfamily DYQ05_12285 IPR018265 Ribosomal protein L35, conserved site DYQ05_12285 IPR001706 Ribosomal protein L35, non-mitochondrial DYQ05_12285 IPR021137 Ribosomal protein L35 DYQ05_12290 IPR035566 Ribosomal protein L20, C-terminal DYQ05_12290 IPR005813 Ribosomal protein L20 DYQ05_12300 IPR036192 Cell division protein ZapA-like superfamily DYQ05_12300 IPR007838 Cell division protein ZapA-like DYQ05_12305 IPR003791 Protein of unknown function UPF0178 DYQ05_12315 IPR014137 Nickel import ATP-binding protein NikE DYQ05_12315 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12315 IPR015858 ABC transporter, nickel import, NikE DYQ05_12315 IPR017871 ABC transporter, conserved site DYQ05_12315 IPR003593 AAA+ ATPase domain DYQ05_12315 IPR003439 ABC transporter-like DYQ05_12320 IPR017871 ABC transporter, conserved site DYQ05_12320 IPR003593 AAA+ ATPase domain DYQ05_12320 IPR003439 ABC transporter-like DYQ05_12320 IPR015857 ABC transporter, nickel import, NikD DYQ05_12320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12325 IPR014157 Nickel ABC transporter, permease subunit NikC DYQ05_12325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_12325 IPR035906 MetI-like superfamily DYQ05_12330 IPR014156 Nickel ABC transporter, permease subunit NikB DYQ05_12330 IPR035906 MetI-like superfamily DYQ05_12330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DYQ05_12335 IPR000914 Solute-binding protein family 5 domain DYQ05_12335 IPR023765 Solute-binding protein family 5, conserved site DYQ05_12335 IPR039424 Solute-binding protein family 5 DYQ05_12335 IPR011980 Nickel ABC transporter, substrate-binding protein NikA DYQ05_12335 IPR030678 Peptide/nickel binding protein, MppA-type DYQ05_12340 IPR016181 Acyl-CoA N-acyltransferase DYQ05_12340 IPR000182 GNAT domain DYQ05_12350 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_12350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_12350 IPR000727 Target SNARE coiled-coil homology domain DYQ05_12350 IPR033479 Double Cache domain 1 DYQ05_12350 IPR004090 Chemotaxis methyl-accepting receptor DYQ05_12350 IPR003660 HAMP domain DYQ05_12360 IPR036291 NAD(P)-binding domain superfamily DYQ05_12360 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DYQ05_12360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_12375 IPR038657 Ribosomal protein L19 superfamily DYQ05_12375 IPR001857 Ribosomal protein L19 DYQ05_12375 IPR008991 Translation protein SH3-like domain superfamily DYQ05_12375 IPR018257 Ribosomal protein L19, conserved site DYQ05_12380 IPR029028 Alpha/beta knot methyltransferases DYQ05_12380 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria DYQ05_12380 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal DYQ05_12380 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DYQ05_12380 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain DYQ05_12385 IPR011961 16S rRNA processing protein RimM DYQ05_12385 IPR011033 PRC-barrel-like superfamily DYQ05_12385 IPR002676 RimM, N-terminal DYQ05_12385 IPR036976 RimM, N-terminal domain superfamily DYQ05_12385 IPR009000 Translation protein, beta-barrel domain superfamily DYQ05_12390 IPR020627 Uncharacterised protein family UPF0109 DYQ05_12390 IPR009019 K homology domain superfamily, prokaryotic type DYQ05_12390 IPR015946 K homology domain-like, alpha/beta DYQ05_12395 IPR000307 Ribosomal protein S16 DYQ05_12395 IPR023803 Ribosomal protein S16 domain superfamily DYQ05_12400 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DYQ05_12400 IPR008279 PEP-utilising enzyme, mobile domain DYQ05_12400 IPR018274 PEP-utilising enzyme, active site DYQ05_12400 IPR023151 PEP-utilising enzyme, conserved site DYQ05_12400 IPR036637 Phosphohistidine domain superfamily DYQ05_12400 IPR024692 Phosphotransferase system, enzyme I DYQ05_12400 IPR006318 Phosphotransferase system, enzyme I-like DYQ05_12400 IPR008731 Phosphotransferase system, enzyme I N-terminal DYQ05_12400 IPR036618 PtsI, HPr-binding domain superfamily DYQ05_12400 IPR040442 Pyruvate kinase-like domain superfamily DYQ05_12400 IPR000121 PEP-utilising enzyme, C-terminal DYQ05_12410 IPR031166 EngA-type guanine nucleotide-binding (G) domain DYQ05_12410 IPR016484 GTP-binding protein EngA DYQ05_12410 IPR005225 Small GTP-binding protein domain DYQ05_12410 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12410 IPR006073 GTP binding domain DYQ05_12410 IPR015946 K homology domain-like, alpha/beta DYQ05_12410 IPR032859 GTPase Der, C-terminal KH-domain-like DYQ05_12420 IPR009057 Homeobox-like domain superfamily DYQ05_12420 IPR001647 DNA-binding HTH domain, TetR-type DYQ05_12420 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DYQ05_12420 IPR041612 YfiR, C-terminal DYQ05_12430 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DYQ05_12430 IPR005843 Alpha-D-phosphohexomutase, C-terminal DYQ05_12430 IPR016066 Alpha-D-phosphohexomutase, conserved site DYQ05_12430 IPR005841 Alpha-D-phosphohexomutase superfamily DYQ05_12430 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DYQ05_12430 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DYQ05_12430 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DYQ05_12430 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DYQ05_12430 IPR006352 Phosphoglucosamine mutase, bacterial type DYQ05_12435 IPR003416 MgtC/SapB/SrpB/YhiD family DYQ05_12455 IPR017871 ABC transporter, conserved site DYQ05_12455 IPR003439 ABC transporter-like DYQ05_12455 IPR003593 AAA+ ATPase domain DYQ05_12455 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12460 IPR036950 Penicillin binding protein transglycosylase domain DYQ05_12460 IPR001460 Penicillin-binding protein, transpeptidase DYQ05_12460 IPR023346 Lysozyme-like domain superfamily DYQ05_12460 IPR001264 Glycosyl transferase, family 51 DYQ05_12460 IPR012338 Beta-lactamase/transpeptidase-like DYQ05_12460 IPR011815 Penicillin-binding protein 1C DYQ05_12460 IPR009647 Penicillin-binding, C-terminal DYQ05_12465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_12465 IPR008268 Peptidase S16, active site DYQ05_12465 IPR003593 AAA+ ATPase domain DYQ05_12465 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12465 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_12465 IPR003111 Lon, substrate-binding domain DYQ05_12465 IPR027065 Lon protease DYQ05_12465 IPR008269 Peptidase S16, Lon proteolytic domain DYQ05_12465 IPR015947 PUA-like superfamily DYQ05_12465 IPR004815 Lon protease, bacterial/eukaryotic-type DYQ05_12465 IPR003959 ATPase, AAA-type, core DYQ05_12465 IPR027543 Lon protease, bacterial DYQ05_12480 IPR001130 TatD family DYQ05_12480 IPR032466 Metal-dependent hydrolase DYQ05_12480 IPR018228 Deoxyribonuclease, TatD-related, conserved site DYQ05_12480 IPR015991 Uncharacterised hydrolase TatD-type DYQ05_12490 IPR023061 Selenophosphate synthetase, class I DYQ05_12490 IPR036921 PurM-like, N-terminal domain superfamily DYQ05_12490 IPR004536 Selenophosphate synthetase DYQ05_12490 IPR010918 PurM-like, C-terminal domain DYQ05_12490 IPR016188 PurM-like, N-terminal domain DYQ05_12490 IPR036676 PurM-like, C-terminal domain superfamily DYQ05_12495 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DYQ05_12495 IPR002890 Macroglobulin domain DYQ05_12495 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain DYQ05_12495 IPR021868 Alpha-2-macroglobulin MG3 domain DYQ05_12495 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain DYQ05_12495 IPR001599 Alpha-2-macroglobulin DYQ05_12495 IPR011625 Alpha-2-macroglobulin, bait region domain DYQ05_12495 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain DYQ05_12505 IPR003825 Colicin V production, CvpA DYQ05_12520 IPR013766 Thioredoxin domain DYQ05_12520 IPR036249 Thioredoxin-like superfamily DYQ05_12520 IPR019479 Peroxiredoxin, C-terminal DYQ05_12520 IPR024706 Peroxiredoxin, AhpC-type DYQ05_12520 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DYQ05_12520 IPR022915 Peroxiredoxin, TDXH subfamily DYQ05_12525 IPR005135 Endonuclease/exonuclease/phosphatase DYQ05_12525 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DYQ05_12525 IPR020848 AP endonuclease 1, conserved site DYQ05_12525 IPR004808 AP endonuclease 1 DYQ05_12525 IPR020847 AP endonuclease 1, binding site DYQ05_12530 IPR036005 Creatinase/aminopeptidase-like DYQ05_12530 IPR000994 Peptidase M24 DYQ05_12530 IPR001714 Peptidase M24, methionine aminopeptidase DYQ05_12530 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DYQ05_12535 IPR036869 Chaperone J-domain superfamily DYQ05_12535 IPR012724 Chaperone DnaJ DYQ05_12535 IPR002939 Chaperone DnaJ, C-terminal DYQ05_12535 IPR001623 DnaJ domain DYQ05_12535 IPR008971 HSP40/DnaJ peptide-binding DYQ05_12535 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DYQ05_12535 IPR001305 Heat shock protein DnaJ, cysteine-rich domain DYQ05_12550 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase DYQ05_12550 IPR003660 HAMP domain DYQ05_12550 IPR029787 Nucleotide cyclase DYQ05_12595 IPR001383 Ribosomal protein L28 DYQ05_12595 IPR037147 Ribosomal protein L28/L24 superfamily DYQ05_12595 IPR026569 Ribosomal protein L28/L24 DYQ05_12595 IPR034704 L28p-like DYQ05_12610 IPR010914 RsgA GTPase domain DYQ05_12610 IPR004881 Ribosome biogenesis GTPase RsgA DYQ05_12610 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12610 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain DYQ05_12620 IPR003593 AAA+ ATPase domain DYQ05_12620 IPR003439 ABC transporter-like DYQ05_12620 IPR017871 ABC transporter, conserved site DYQ05_12620 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12625 IPR000522 ABC transporter, permease protein, BtuC-like DYQ05_12625 IPR037294 ABC transporter, BtuC-like DYQ05_12635 IPR003593 AAA+ ATPase domain DYQ05_12635 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_12635 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_12635 IPR017871 ABC transporter, conserved site DYQ05_12635 IPR011917 ABC transporter, lipid A export, MsbA DYQ05_12635 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12635 IPR039421 Type I protein exporter DYQ05_12635 IPR003439 ABC transporter-like DYQ05_12650 IPR003439 ABC transporter-like DYQ05_12650 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_12650 IPR010128 ATPase, type I secretion system, PrtD DYQ05_12650 IPR003593 AAA+ ATPase domain DYQ05_12650 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12650 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_12650 IPR017871 ABC transporter, conserved site DYQ05_12660 IPR003439 ABC transporter-like DYQ05_12660 IPR036640 ABC transporter type 1, transmembrane domain superfamily DYQ05_12660 IPR011527 ABC transporter type 1, transmembrane domain DYQ05_12660 IPR003593 AAA+ ATPase domain DYQ05_12660 IPR017871 ABC transporter, conserved site DYQ05_12660 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12660 IPR039421 Type I protein exporter DYQ05_12670 IPR000456 Ribosomal protein L17 DYQ05_12670 IPR036373 Ribosomal protein L17 superfamily DYQ05_12675 IPR036603 RNA polymerase, RBP11-like subunit DYQ05_12675 IPR036643 DNA-directed RNA polymerase, insert domain superfamily DYQ05_12675 IPR011260 RNA polymerase, alpha subunit, C-terminal DYQ05_12675 IPR011773 DNA-directed RNA polymerase, alpha subunit DYQ05_12675 IPR011262 DNA-directed RNA polymerase, insert domain DYQ05_12675 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type DYQ05_12680 IPR001971 Ribosomal protein S11 DYQ05_12680 IPR019981 Ribosomal protein S11, bacterial-type DYQ05_12680 IPR018102 Ribosomal S11, conserved site DYQ05_12680 IPR036967 Ribosomal protein S11 superfamily DYQ05_12685 IPR019980 Ribosomal protein S13, bacterial-type DYQ05_12685 IPR010979 Ribosomal protein S13-like, H2TH DYQ05_12685 IPR001892 Ribosomal protein S13 DYQ05_12685 IPR027437 30s ribosomal protein S13, C-terminal DYQ05_12685 IPR018269 Ribosomal protein S13, conserved site DYQ05_12690 IPR000473 Ribosomal protein L36 DYQ05_12690 IPR035977 Ribosomal protein L36 superfamily DYQ05_12695 IPR002208 SecY/SEC61-alpha family DYQ05_12695 IPR026593 Protein translocase subunit SecY DYQ05_12695 IPR030659 SecY conserved site DYQ05_12695 IPR023201 SecY domain superfamily DYQ05_12700 IPR021131 Ribosomal protein L18e/L15P DYQ05_12700 IPR001196 Ribosomal protein L15, conserved site DYQ05_12700 IPR005749 Ribosomal protein L15, bacterial-type DYQ05_12700 IPR036227 Ribosomal L18e/L15P superfamily DYQ05_12700 IPR030878 Ribosomal protein L15 DYQ05_12705 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DYQ05_12705 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DYQ05_12705 IPR018038 Ribosomal protein L30, conserved site DYQ05_12705 IPR005996 Ribosomal protein L30, bacterial-type DYQ05_12710 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_12710 IPR005324 Ribosomal protein S5, C-terminal DYQ05_12710 IPR000851 Ribosomal protein S5 DYQ05_12710 IPR005712 Ribosomal protein S5, bacterial-type DYQ05_12710 IPR018192 Ribosomal protein S5, N-terminal, conserved site DYQ05_12710 IPR013810 Ribosomal protein S5, N-terminal DYQ05_12710 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_12715 IPR004389 Ribosomal protein L18, bacterial-type DYQ05_12715 IPR005484 Ribosomal protein L18 DYQ05_12720 IPR002358 Ribosomal protein L6, conserved site DYQ05_12720 IPR019906 Ribosomal protein L6, bacterial-type DYQ05_12720 IPR020040 Ribosomal protein L6, alpha-beta domain DYQ05_12720 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily DYQ05_12720 IPR000702 Ribosomal protein L6 DYQ05_12725 IPR000630 Ribosomal protein S8 DYQ05_12725 IPR035987 Ribosomal protein S8 superfamily DYQ05_12730 IPR018271 Ribosomal protein S14, conserved site DYQ05_12730 IPR001209 Ribosomal protein S14 DYQ05_12730 IPR023053 Ribosomal protein S14, type Z DYQ05_12735 IPR002132 Ribosomal protein L5 DYQ05_12735 IPR020930 Ribosomal protein L5, bacterial-type DYQ05_12735 IPR031309 Ribosomal protein L5, C-terminal DYQ05_12735 IPR020929 Ribosomal protein L5, conserved site DYQ05_12735 IPR022803 Ribosomal protein L5 domain superfamily DYQ05_12735 IPR031310 Ribosomal protein L5, N-terminal DYQ05_12740 IPR005825 Ribosomal protein L24/L26, conserved site DYQ05_12740 IPR014722 Ribosomal protein L2, domain 2 DYQ05_12740 IPR041988 Ribosomal Protein L26/L24, KOW domain DYQ05_12740 IPR003256 Ribosomal protein L24 DYQ05_12740 IPR005824 KOW DYQ05_12740 IPR008991 Translation protein SH3-like domain superfamily DYQ05_12745 IPR000218 Ribosomal protein L14P DYQ05_12745 IPR036853 Ribosomal protein L14 superfamily DYQ05_12745 IPR019972 Ribosomal protein L14P, conserved site DYQ05_12745 IPR005745 Ribosomal protein L14P, bacterial-type DYQ05_12750 IPR012340 Nucleic acid-binding, OB-fold DYQ05_12750 IPR019984 30S ribosomal protein S17 DYQ05_12750 IPR000266 Ribosomal protein S17/S11 DYQ05_12750 IPR019979 Ribosomal protein S17, conserved site DYQ05_12755 IPR001854 Ribosomal protein L29/L35 DYQ05_12755 IPR036049 Ribosomal protein L29/L35 superfamily DYQ05_12760 IPR000114 Ribosomal protein L16 DYQ05_12760 IPR016180 Ribosomal protein L10e/L16 DYQ05_12760 IPR020798 Ribosomal protein L16, conserved site DYQ05_12760 IPR036920 Ribosomal protein L10e/L16 superfamily DYQ05_12765 IPR001351 Ribosomal protein S3, C-terminal DYQ05_12765 IPR036419 Ribosomal protein S3, C-terminal domain superfamily DYQ05_12765 IPR018280 Ribosomal protein S3, conserved site DYQ05_12765 IPR005704 Ribosomal protein S3, bacterial-type DYQ05_12765 IPR009019 K homology domain superfamily, prokaryotic type DYQ05_12765 IPR004044 K Homology domain, type 2 DYQ05_12765 IPR015946 K homology domain-like, alpha/beta DYQ05_12765 IPR004087 K Homology domain DYQ05_12770 IPR001063 Ribosomal protein L22/L17 DYQ05_12770 IPR018260 Ribosomal protein L22/L17, conserved site DYQ05_12770 IPR036394 Ribosomal protein L22/L17 superfamily DYQ05_12770 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type DYQ05_12775 IPR023575 Ribosomal protein S19, superfamily DYQ05_12775 IPR005732 Ribosomal protein S19, bacterial-type DYQ05_12775 IPR020934 Ribosomal protein S19 conserved site DYQ05_12775 IPR002222 Ribosomal protein S19/S15 DYQ05_12780 IPR022669 Ribosomal protein L2, C-terminal DYQ05_12780 IPR005880 Ribosomal protein L2, bacterial/organellar-type DYQ05_12780 IPR014726 Ribosomal protein L2, domain 3 DYQ05_12780 IPR008991 Translation protein SH3-like domain superfamily DYQ05_12780 IPR012340 Nucleic acid-binding, OB-fold DYQ05_12780 IPR022666 Ribosomal Proteins L2, RNA binding domain DYQ05_12780 IPR014722 Ribosomal protein L2, domain 2 DYQ05_12780 IPR002171 Ribosomal protein L2 DYQ05_12785 IPR012678 Ribosomal protein L23/L15e core domain superfamily DYQ05_12785 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DYQ05_12785 IPR001014 Ribosomal protein L23/L25, conserved site DYQ05_12785 IPR013025 Ribosomal protein L25/L23 DYQ05_12790 IPR023574 Ribosomal protein L4 domain superfamily DYQ05_12790 IPR013005 50S ribosomal protein uL4 DYQ05_12790 IPR002136 Ribosomal protein L4/L1e DYQ05_12795 IPR009000 Translation protein, beta-barrel domain superfamily DYQ05_12795 IPR019926 Ribosomal protein L3, conserved site DYQ05_12795 IPR019927 Ribosomal protein L3, bacterial/organelle-type DYQ05_12795 IPR000597 Ribosomal protein L3 DYQ05_12800 IPR001848 Ribosomal protein S10 DYQ05_12800 IPR018268 Ribosomal protein S10, conserved site DYQ05_12800 IPR027486 Ribosomal protein S10 domain DYQ05_12800 IPR036838 Ribosomal protein S10 domain superfamily DYQ05_12810 IPR011703 ATPase, AAA-3 DYQ05_12810 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12810 IPR041628 ChlI/MoxR, AAA lid domain DYQ05_12815 IPR003669 Thymidylate synthase ThyX DYQ05_12815 IPR036098 Thymidylate synthase ThyX superfamily DYQ05_12845 IPR003593 AAA+ ATPase domain DYQ05_12845 IPR037219 Peptidase M41-like DYQ05_12845 IPR000642 Peptidase M41 DYQ05_12845 IPR003959 ATPase, AAA-type, core DYQ05_12845 IPR041569 AAA ATPase, AAA+ lid domain DYQ05_12845 IPR003960 ATPase, AAA-type, conserved site DYQ05_12845 IPR005936 Peptidase, FtsH DYQ05_12845 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12865 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ05_12865 IPR029151 Periplasmic sensor-like domain superfamily DYQ05_12865 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DYQ05_12865 IPR003660 HAMP domain DYQ05_12865 IPR033479 Double Cache domain 1 DYQ05_12880 IPR000084 PE-PGRS family, N-terminal DYQ05_12880 IPR013094 Alpha/beta hydrolase fold-3 DYQ05_12880 IPR029058 Alpha/Beta hydrolase fold DYQ05_12900 IPR012340 Nucleic acid-binding, OB-fold DYQ05_12900 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12900 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain DYQ05_12900 IPR038475 RecG, C-terminal domain superfamily DYQ05_12900 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_12900 IPR033454 RecG, wedge domain DYQ05_12900 IPR011545 DEAD/DEAH box helicase domain DYQ05_12930 IPR032781 ABC-transporter extension domain DYQ05_12930 IPR003593 AAA+ ATPase domain DYQ05_12930 IPR003439 ABC transporter-like DYQ05_12930 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_12930 IPR017871 ABC transporter, conserved site DYQ05_12950 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_12950 IPR017758 Coenzyme A disulphide reductase DYQ05_12950 IPR023753 FAD/NAD(P)-binding domain DYQ05_12950 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DYQ05_12950 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYQ05_12950 IPR023536 Coenzyme A disulphide reductase, staphyolococci DYQ05_12965 IPR042229 Listeria-Bacteroides repeat domain superfamily DYQ05_12965 IPR025883 Cadherin-like beta sandwich domain DYQ05_12965 IPR013378 Listeria/Bacterioides repeat DYQ05_12980 IPR018631 AAA-ATPase-like domain DYQ05_12980 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_12990 IPR018062 HTH domain AraC-type, conserved site DYQ05_12990 IPR029442 GyrI-like small molecule binding domain DYQ05_12990 IPR010499 Bacterial transcription activator, effector binding DYQ05_12990 IPR020449 Transcription regulator HTH, AraC- type DYQ05_12990 IPR018060 DNA binding HTH domain, AraC-type DYQ05_12990 IPR009057 Homeobox-like domain superfamily DYQ05_12990 IPR011256 Regulatory factor, effector binding domain superfamily DYQ05_13000 IPR036390 Winged helix DNA-binding domain superfamily DYQ05_13000 IPR026881 WYL domain DYQ05_13000 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_13000 IPR013196 Helix-turn-helix, type 11 DYQ05_13000 IPR001034 DeoR-type HTH domain DYQ05_13000 IPR028349 Protein PafC DYQ05_13015 IPR020449 Transcription regulator HTH, AraC- type DYQ05_13015 IPR010499 Bacterial transcription activator, effector binding DYQ05_13015 IPR029442 GyrI-like small molecule binding domain DYQ05_13015 IPR009057 Homeobox-like domain superfamily DYQ05_13015 IPR018060 DNA binding HTH domain, AraC-type DYQ05_13015 IPR018062 HTH domain AraC-type, conserved site DYQ05_13015 IPR011256 Regulatory factor, effector binding domain superfamily DYQ05_13035 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DYQ05_13035 IPR007329 FMN-binding DYQ05_13035 IPR010960 Flavocytochrome c DYQ05_13035 IPR036188 FAD/NAD(P)-binding domain superfamily DYQ05_13035 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DYQ05_13045 IPR000522 ABC transporter, permease protein, BtuC-like DYQ05_13045 IPR037294 ABC transporter, BtuC-like DYQ05_13055 IPR002491 ABC transporter periplasmic binding domain DYQ05_13100 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_13100 IPR018631 AAA-ATPase-like domain DYQ05_13105 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_13105 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_13105 IPR027065 Lon protease DYQ05_13105 IPR008269 Peptidase S16, Lon proteolytic domain DYQ05_13105 IPR041699 Lon protease, AAA domain DYQ05_13120 IPR029787 Nucleotide cyclase DYQ05_13120 IPR000160 GGDEF domain DYQ05_13120 IPR000700 PAS-associated, C-terminal DYQ05_13120 IPR035965 PAS domain superfamily DYQ05_13120 IPR013656 PAS fold-4 DYQ05_13120 IPR000014 PAS domain DYQ05_13125 IPR035996 Tetrapyrrole methylase superfamily DYQ05_13125 IPR000878 Tetrapyrrole methylase DYQ05_13125 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase DYQ05_13125 IPR014777 Tetrapyrrole methylase, subdomain 1 DYQ05_13130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DYQ05_13130 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit DYQ05_13130 IPR007848 Methyltransferase small domain DYQ05_13145 IPR034137 RecR, TOPRIM domain DYQ05_13145 IPR000093 DNA recombination protein RecR DYQ05_13145 IPR023627 Recombination protein RecR DYQ05_13145 IPR023628 Recombination protein RecR, C4-type zinc finger DYQ05_13145 IPR006171 TOPRIM domain DYQ05_13145 IPR015967 Recombination protein RecR, conserved site DYQ05_13150 IPR004401 Nucleoid-associated protein YbaB/EbfC family DYQ05_13150 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DYQ05_13155 IPR016188 PurM-like, N-terminal domain DYQ05_13155 IPR010074 Phosphoribosylformylglycinamidine subunit PurL DYQ05_13155 IPR036921 PurM-like, N-terminal domain superfamily DYQ05_13155 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain DYQ05_13155 IPR010918 PurM-like, C-terminal domain DYQ05_13155 IPR036676 PurM-like, C-terminal domain superfamily DYQ05_13175 IPR035990 Triosephosphate isomerase superfamily DYQ05_13175 IPR000652 Triosephosphate isomerase DYQ05_13175 IPR020861 Triosephosphate isomerase, active site DYQ05_13175 IPR013785 Aldolase-type TIM barrel DYQ05_13175 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic DYQ05_13180 IPR005886 UDP-glucose 4-epimerase DYQ05_13180 IPR036291 NAD(P)-binding domain superfamily DYQ05_13180 IPR016040 NAD(P)-binding domain DYQ05_13185 IPR022630 S-adenosylmethionine synthetase, C-terminal DYQ05_13185 IPR022629 S-adenosylmethionine synthetase, central domain DYQ05_13185 IPR022628 S-adenosylmethionine synthetase, N-terminal DYQ05_13185 IPR002133 S-adenosylmethionine synthetase DYQ05_13185 IPR022636 S-adenosylmethionine synthetase superfamily DYQ05_13185 IPR022631 S-adenosylmethionine synthetase, conserved site DYQ05_13190 IPR018631 AAA-ATPase-like domain DYQ05_13190 IPR012547 PD-(D/E)XK nuclease superfamily 9 DYQ05_13195 IPR002528 Multi antimicrobial extrusion protein DYQ05_13200 IPR011034 Formyl transferase-like, C-terminal domain superfamily DYQ05_13200 IPR036477 Formyl transferase, N-terminal domain superfamily DYQ05_13200 IPR002376 Formyl transferase, N-terminal DYQ05_13200 IPR037022 Formyl transferase, C-terminal domain superfamily DYQ05_13200 IPR005793 Formyl transferase, C-terminal DYQ05_13200 IPR005794 Methionyl-tRNA formyltransferase DYQ05_13200 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain DYQ05_13205 IPR036821 Peptide deformylase superfamily DYQ05_13205 IPR023635 Peptide deformylase DYQ05_13210 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DYQ05_13210 IPR029033 Histidine phosphatase superfamily DYQ05_13210 IPR013078 Histidine phosphatase superfamily, clade-1 DYQ05_13210 IPR005952 Phosphoglycerate mutase 1 DYQ05_13220 IPR005543 PASTA domain DYQ05_13230 IPR007692 DNA helicase, DnaB type DYQ05_13230 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily DYQ05_13230 IPR007694 DNA helicase, DnaB-like, C-terminal DYQ05_13230 IPR007693 DNA helicase, DnaB-like, N-terminal DYQ05_13230 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DYQ05_13230 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_13245 IPR036063 Smr domain superfamily DYQ05_13245 IPR002625 Smr domain DYQ05_13245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_13245 IPR005747 Endonuclease MutS2 DYQ05_13245 IPR000432 DNA mismatch repair protein MutS, C-terminal DYQ05_13245 IPR007696 DNA mismatch repair protein MutS, core DYQ05_13245 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DYQ05_13260 IPR024163 Aerotolerance regulator, N-terminal DYQ05_13260 IPR036465 von Willebrand factor A-like domain superfamily DYQ05_13260 IPR022933 Uncharacterised protein family UPF0353 DYQ05_13260 IPR002035 von Willebrand factor, type A DYQ05_13265 IPR036465 von Willebrand factor A-like domain superfamily DYQ05_13265 IPR002035 von Willebrand factor, type A DYQ05_13265 IPR033881 von Willebrand factor domain BatA-type DYQ05_13275 IPR002881 Domain of unknown function DUF58 DYQ05_13275 IPR036465 von Willebrand factor A-like domain superfamily DYQ05_13285 IPR033399 Putative outer membrane lipoprotein-sorting protein DYQ05_13295 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DYQ05_13295 IPR009057 Homeobox-like domain superfamily DYQ05_13295 IPR001647 DNA-binding HTH domain, TetR-type DYQ05_13310 IPR037294 ABC transporter, BtuC-like DYQ05_13310 IPR001626 ABC transporter, TroCD-like DYQ05_13315 IPR003593 AAA+ ATPase domain DYQ05_13315 IPR003439 ABC transporter-like DYQ05_13315 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_13315 IPR017871 ABC transporter, conserved site DYQ05_13320 IPR006127 Periplasmic solute binding protein, ZnuA-like DYQ05_13320 IPR006128 Adhesion lipoprotein DYQ05_13320 IPR006129 Adhesin B DYQ05_13340 IPR026590 Sirtuin family, catalytic core domain DYQ05_13340 IPR026591 Sirtuin, catalytic core small domain superfamily DYQ05_13340 IPR028628 Sirtuin, class U DYQ05_13340 IPR029035 DHS-like NAD/FAD-binding domain superfamily DYQ05_13340 IPR003000 Sirtuin family DYQ05_13345 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DYQ05_13345 IPR001387 Cro/C1-type helix-turn-helix domain DYQ05_13345 IPR013430 Toxin-antitoxin system, antidote protein, HigA DYQ05_13355 IPR004485 Cobalamin biosynthesis CobD/CbiB DYQ05_13360 IPR000023 Phosphofructokinase domain DYQ05_13360 IPR035966 Phosphofructokinase superfamily DYQ05_13360 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type DYQ05_13360 IPR022953 ATP-dependent 6-phosphofructokinase DYQ05_13370 IPR006171 TOPRIM domain DYQ05_13370 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DYQ05_13370 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DYQ05_13370 IPR018522 DNA topoisomerase, type IIA, conserved site DYQ05_13370 IPR002288 DNA gyrase B subunit, C-terminal DYQ05_13370 IPR003594 Histidine kinase/HSP90-like ATPase DYQ05_13370 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_13370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DYQ05_13370 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DYQ05_13370 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_13370 IPR001241 DNA topoisomerase, type IIA DYQ05_13380 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DYQ05_13380 IPR029000 Cyclophilin-like domain superfamily DYQ05_13380 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DYQ05_13390 IPR039247 Jag protein DYQ05_13390 IPR038008 Jag, KH domain DYQ05_13390 IPR036867 R3H domain superfamily DYQ05_13390 IPR034079 Jag, R3H domain DYQ05_13390 IPR032782 Jag, N-terminal DYQ05_13390 IPR038247 Jag, N-terminal domain superfamily DYQ05_13390 IPR015946 K homology domain-like, alpha/beta DYQ05_13390 IPR001374 R3H domain DYQ05_13395 IPR028055 Membrane insertase YidC/Oxa1, C-terminal DYQ05_13395 IPR028053 Membrane insertase YidC, N-terminal DYQ05_13395 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 DYQ05_13395 IPR038210 Membrane insertase YidC, periplasmic domain DYQ05_13395 IPR038221 YidC, periplasmic domain superfamily DYQ05_13395 IPR019998 Membrane insertase YidC DYQ05_13400 IPR002696 Putative membrane protein insertion efficiency factor DYQ05_13405 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_13405 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_13405 IPR020539 Ribonuclease P, conserved site DYQ05_13405 IPR000100 Ribonuclease P DYQ05_13410 IPR000271 Ribosomal protein L34 DYQ05_13415 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DYQ05_13420 IPR035994 Nucleoside phosphorylase superfamily DYQ05_13420 IPR004402 Purine nucleoside phosphorylase DeoD-type DYQ05_13420 IPR018016 Nucleoside phosphorylase, conserved site DYQ05_13420 IPR000845 Nucleoside phosphorylase domain DYQ05_13450 IPR000160 GGDEF domain DYQ05_13450 IPR033424 Membrane-associated sensor domain DYQ05_13450 IPR029787 Nucleotide cyclase DYQ05_13460 IPR029787 Nucleotide cyclase DYQ05_13460 IPR005330 MHYT domain DYQ05_13460 IPR000160 GGDEF domain DYQ05_13460 IPR035919 EAL domain superfamily DYQ05_13460 IPR001633 EAL domain DYQ05_13475 IPR001279 Metallo-beta-lactamase DYQ05_13475 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DYQ05_13475 IPR013471 Ribonuclease Z/BN DYQ05_13480 IPR032779 Flagellar motor switch protein FliG, middle domain DYQ05_13480 IPR011002 Flagellar motor switch protein FliG, alpha-helical DYQ05_13480 IPR023087 Flagellar motor switch protein FliG, C-terminal DYQ05_13480 IPR000090 Flagellar motor switch protein FliG DYQ05_13480 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DYQ05_13485 IPR001444 Flagellar basal body rod protein, N-terminal DYQ05_13485 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DYQ05_13485 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DYQ05_13485 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DYQ05_13485 IPR019776 Flagellar basal body rod protein, conserved site DYQ05_13485 IPR012834 Flagellar basal-body rod FlgG DYQ05_13490 IPR019301 Flagellar protein FlgJ, N-terminal DYQ05_13495 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily DYQ05_13495 IPR006094 FAD linked oxidase, N-terminal DYQ05_13495 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase DYQ05_13495 IPR016169 FAD-binding, type PCMH, subdomain 2 DYQ05_13495 IPR016166 FAD-binding domain, PCMH-type DYQ05_13495 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal DYQ05_13495 IPR016167 FAD-binding, type PCMH, subdomain 1 DYQ05_13495 IPR036318 FAD-binding, type PCMH-like superfamily DYQ05_13540 IPR003439 ABC transporter-like DYQ05_13540 IPR003593 AAA+ ATPase domain DYQ05_13540 IPR017871 ABC transporter, conserved site DYQ05_13540 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_13545 IPR014001 Helicase superfamily 1/2, ATP-binding domain DYQ05_13545 IPR011545 DEAD/DEAH box helicase domain DYQ05_13545 IPR004589 DNA helicase, ATP-dependent, RecQ type DYQ05_13545 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial DYQ05_13545 IPR001650 Helicase, C-terminal DYQ05_13545 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DYQ05_13545 IPR010997 HRDC-like superfamily DYQ05_13545 IPR036388 Winged helix-like DNA-binding domain superfamily DYQ05_13545 IPR018982 RQC domain DYQ05_13545 IPR027417 P-loop containing nucleoside triphosphate hydrolase DYQ05_13545 IPR002121 HRDC domain DYQ05_13555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DYQ05_13555 IPR034160 DNA gyrase subunit B, TOPRIM domain DYQ05_13555 IPR006171 TOPRIM domain DYQ05_13555 IPR018522 DNA topoisomerase, type IIA, conserved site DYQ05_13555 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DYQ05_13555 IPR001241 DNA topoisomerase, type IIA DYQ05_13555 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DYQ05_13555 IPR003594 Histidine kinase/HSP90-like ATPase DYQ05_13555 IPR011557 DNA gyrase, subunit B DYQ05_13555 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DYQ05_13555 IPR020568 Ribosomal protein S5 domain 2-type fold DYQ05_13555 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DYQ05_13555 IPR002288 DNA gyrase B subunit, C-terminal