locus-tag class description TPE_0001 PF11638 DnaA N-terminal domain TPE_0001 PF08299 Bacterial dnaA protein helix-turn-helix TPE_0001 PF00308 Bacterial dnaA protein TPE_0005 PF00152 tRNA synthetases class II (D, K and N) TPE_0005 PF01336 OB-fold nucleic acid binding domain TPE_0006 PF07943 Penicillin-binding protein 5, C-terminal domain TPE_0006 PF00768 D-alanyl-D-alanine carboxypeptidase TPE_0007 PF02570 Precorrin-8X methylmutase TPE_0009 PF00672 HAMP domain TPE_0009 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0009 PF02743 Cache domain TPE_0014 PF16916 Dimerisation domain of Zinc Transporter TPE_0014 PF01545 Cation efflux family TPE_0021 PF03023 Lipid II flippase MurJ TPE_0022 PF03616 Sodium/glutamate symporter TPE_0025 PF12671 Putative amidase domain TPE_0028 PF01192 RNA polymerase Rpb6 TPE_0029 PF08011 PD-(D/E)XK nuclease superfamily TPE_0029 PF09820 Predicted AAA-ATPase TPE_0033 PF00691 OmpA family TPE_0034 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0034 PF00672 HAMP domain TPE_0034 PF12729 Four helix bundle sensory module for signal transduction TPE_0035 PF07687 Peptidase dimerisation domain TPE_0035 PF01546 Peptidase family M20/M25/M40 TPE_0036 PF01479 S4 domain TPE_0036 PF00849 RNA pseudouridylate synthase TPE_0037 PF04079 Segregation and condensation complex subunit ScpB TPE_0038 PF02616 Segregation and condensation protein ScpA TPE_0041 PF02896 PEP-utilising enzyme, TIM barrel domain TPE_0041 PF00391 PEP-utilising enzyme, mobile domain TPE_0044 PF13519 von Willebrand factor type A domain TPE_0045 PF18663 Pallilysin beta barrel domain TPE_0046 PF00581 Rhodanese-like domain TPE_0049 PF01032 FecCD transport family TPE_0050 PF00005 ABC transporter TPE_0059 PF12804 MobA-like NTP transferase domain TPE_0060 PF02028 BCCT, betaine/carnitine/choline family transporter TPE_0061 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_0062 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_0063 PF09338 Glycine/sarcosine/betaine reductase component B subunits TPE_0064 PF02028 BCCT, betaine/carnitine/choline family transporter TPE_0066 PF01032 FecCD transport family TPE_0068 PF00300 Histidine phosphatase superfamily (branch 1) TPE_0071 PF01880 Desulfoferrodoxin TPE_0073 PF01554 MatE TPE_0081 PF18807 Tripartite Tc toxins repeat TPE_0081 PF05785 Rho-activating domain of cytotoxic necrotizing factor TPE_0131 PF00005 ABC transporter TPE_0132 PF00005 ABC transporter TPE_0132 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_0133 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_0133 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0134 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_0136 PF12833 Helix-turn-helix domain TPE_0136 PF02311 AraC-like ligand binding domain TPE_0137 PF02743 Cache domain TPE_0137 PF00672 HAMP domain TPE_0137 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0146 PF10609 NUBPL iron-transfer P-loop NTPase TPE_0148 PF01790 Prolipoprotein diacylglyceryl transferase TPE_0149 PF02540 NAD synthase TPE_0154 PF02390 Putative methyltransferase TPE_0159 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_0160 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_0161 PF09338 Glycine/sarcosine/betaine reductase component B subunits TPE_0162 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0162 PF02743 Cache domain TPE_0162 PF00672 HAMP domain TPE_0163 PF07724 AAA domain (Cdc48 subfamily) TPE_0163 PF17871 AAA lid domain TPE_0163 PF02861 Clp amino terminal domain, pathogenicity island component TPE_0163 PF10431 C-terminal, D2-small domain, of ClpB protein TPE_0163 PF00004 ATPase family associated with various cellular activities (AAA) TPE_0164 PF02617 ATP-dependent Clp protease adaptor protein ClpS TPE_0166 PF02677 Epoxyqueuosine reductase QueH TPE_0168 PF03793 PASTA domain TPE_0168 PF03717 Penicillin-binding Protein dimerisation domain TPE_0168 PF00905 Penicillin binding protein transpeptidase domain TPE_0172 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TPE_0172 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPE_0173 PF01479 S4 domain TPE_0173 PF00163 Ribosomal protein S4/S9 N-terminal domain TPE_0174 PF00166 Chaperonin 10 Kd subunit TPE_0176 PF04545 Sigma-70, region 4 TPE_0176 PF04539 Sigma-70 region 3 TPE_0176 PF04542 Sigma-70 region 2 TPE_0176 PF00140 Sigma-70 factor, region 1.2 TPE_0176 PF03979 Sigma-70 factor, region 1.1 TPE_0177 PF01171 PP-loop family TPE_0180 PF13180 PDZ domain TPE_0182 PF13026 Protein of unknown function (DUF3887) TPE_0182 PF12146 Serine aminopeptidase, S33 TPE_0183 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TPE_0183 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TPE_0186 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TPE_0187 PF13635 Domain of unknown function (DUF4143) TPE_0187 PF13173 AAA domain TPE_0188 PF00132 Bacterial transferase hexapeptide (six repeats) TPE_0190 PF02719 Polysaccharide biosynthesis protein TPE_0191 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TPE_0195 PF02350 UDP-N-acetylglucosamine 2-epimerase TPE_0196 PF02911 Formyl transferase, C-terminal domain TPE_0196 PF00551 Formyl transferase TPE_0201 PF03102 NeuB family TPE_0201 PF08666 SAF domain TPE_0202 PF02348 Cytidylyltransferase TPE_0203 PF00483 Nucleotidyl transferase TPE_0207 PF02350 UDP-N-acetylglucosamine 2-epimerase TPE_0208 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TPE_0208 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TPE_0208 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TPE_0211 PF04991 LicD family TPE_0213 PF01757 Acyltransferase family TPE_0215 PF00483 Nucleotidyl transferase TPE_0216 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TPE_0217 PF04321 RmlD substrate binding domain TPE_0218 PF16363 GDP-mannose 4,6 dehydratase TPE_0221 PF03313 Serine dehydratase alpha chain TPE_0222 PF03315 Serine dehydratase beta chain TPE_0222 PF01842 ACT domain TPE_0223 PF05525 Branched-chain amino acid transport protein TPE_0226 PF00919 Uncharacterized protein family UPF0004 TPE_0226 PF04055 Radical SAM superfamily TPE_0239 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TPE_0239 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TPE_0241 PF13742 OB-fold nucleic acid binding domain TPE_0241 PF02601 Exonuclease VII, large subunit TPE_0244 PF00005 ABC transporter TPE_0246 PF03390 2-hydroxycarboxylate transporter family TPE_0247 PF13407 Periplasmic binding protein domain TPE_0247 PF18610 Periplasmic binding protein domain TPE_0249 PF13439 Glycosyltransferase Family 4 TPE_0249 PF00534 Glycosyl transferases group 1 TPE_0250 PF08402 TOBE domain TPE_0250 PF00005 ABC transporter TPE_0251 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0252 PF00113 Enolase, C-terminal TIM barrel domain TPE_0252 PF03952 Enolase, N-terminal domain TPE_0254 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0255 PF00005 ABC transporter TPE_0264 PF02254 TrkA-N domain TPE_0264 PF02080 TrkA-C domain TPE_0265 PF03989 DNA gyrase C-terminal domain, beta-propeller TPE_0265 PF00521 DNA gyrase/topoisomerase IV, subunit A TPE_0266 PF06418 CTP synthase N-terminus TPE_0266 PF00117 Glutamine amidotransferase class-I TPE_0268 PF00391 PEP-utilising enzyme, mobile domain TPE_0268 PF02896 PEP-utilising enzyme, TIM barrel domain TPE_0268 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TPE_0270 PF00072 Response regulator receiver domain TPE_0271 PF02631 RecX family TPE_0272 PF00380 Ribosomal protein S9/S16 TPE_0273 PF00572 Ribosomal protein L13 TPE_0275 PF13088 BNR repeat-like domain TPE_0275 PF00754 F5/8 type C domain TPE_0275 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase TPE_0277 PF02743 Cache domain TPE_0277 PF00672 HAMP domain TPE_0277 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0279 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TPE_0281 PF16811 TRAP transporter T-component TPE_0284 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TPE_0286 PF00005 ABC transporter TPE_0287 PF00005 ABC transporter TPE_0298 PF02661 Fic/DOC family TPE_0298 PF12728 Helix-turn-helix domain TPE_0301 PF01547 Bacterial extracellular solute-binding protein TPE_0302 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0303 PF00005 ABC transporter TPE_0303 PF08402 TOBE domain TPE_0306 PF01522 Polysaccharide deacetylase TPE_0308 PF00005 ABC transporter TPE_0309 PF02632 BioY family TPE_0313 PF00571 CBS domain TPE_0313 PF00478 IMP dehydrogenase / GMP reductase domain TPE_0316 PF01470 Pyroglutamyl peptidase TPE_0319 PF13419 Haloacid dehalogenase-like hydrolase TPE_0321 PF03781 Sulfatase-modifying factor enzyme 1 TPE_0322 PF00196 Bacterial regulatory proteins, luxR family TPE_0322 PF00072 Response regulator receiver domain TPE_0323 PF02080 TrkA-C domain TPE_0323 PF02254 TrkA-N domain TPE_0324 PF02386 Cation transport protein TPE_0330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TPE_0330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TPE_0334 PF02978 Signal peptide binding domain TPE_0334 PF02881 SRP54-type protein, helical bundle domain TPE_0334 PF00448 SRP54-type protein, GTPase domain TPE_0336 PF00465 Iron-containing alcohol dehydrogenase TPE_0338 PF02223 Thymidylate kinase TPE_0341 PF08546 Ketopantoate reductase PanE/ApbA C terminal TPE_0341 PF02558 Ketopantoate reductase PanE/ApbA TPE_0344 PF07244 Surface antigen variable number repeat TPE_0344 PF01103 Surface antigen TPE_0346 PF00488 MutS domain V TPE_0346 PF05190 MutS family domain IV TPE_0346 PF05192 MutS domain III TPE_0346 PF05188 MutS domain II TPE_0346 PF01624 MutS domain I TPE_0348 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TPE_0349 PF02504 Fatty acid synthesis protein TPE_0353 PF13847 Methyltransferase domain TPE_0356 PF03687 Uncharacterised protein family (UPF0164) TPE_0359 PF00005 ABC transporter TPE_0363 PF00664 ABC transporter transmembrane region TPE_0363 PF00005 ABC transporter TPE_0364 PF00005 ABC transporter TPE_0364 PF00664 ABC transporter transmembrane region TPE_0366 PF01979 Amidohydrolase family TPE_0367 PF07075 Protein of unknown function (DUF1343) TPE_0368 PF00144 Beta-lactamase TPE_0371 PF13188 PAS domain TPE_0371 PF00158 Sigma-54 interaction domain TPE_0371 PF02954 Bacterial regulatory protein, Fis family TPE_0372 PF00072 Response regulator receiver domain TPE_0372 PF02954 Bacterial regulatory protein, Fis family TPE_0372 PF00158 Sigma-54 interaction domain TPE_0379 PF07664 Ferrous iron transport protein B C terminus TPE_0379 PF07670 Nucleoside recognition TPE_0379 PF17910 FeoB cytosolic helical domain TPE_0379 PF04023 FeoA domain TPE_0379 PF02421 Ferrous iron transport protein B TPE_0387 PF00271 Helicase conserved C-terminal domain TPE_0387 PF00270 DEAD/DEAH box helicase TPE_0387 PF00570 HRDC domain TPE_0387 PF09382 RQC domain TPE_0387 PF16124 RecQ zinc-binding TPE_0395 PF02872 5'-nucleotidase, C-terminal domain TPE_0395 PF00149 Calcineurin-like phosphoesterase TPE_0398 PF01168 Alanine racemase, N-terminal domain TPE_0400 PF01330 RuvA N terminal domain TPE_0401 PF02075 Crossover junction endodeoxyribonuclease RuvC TPE_0403 PF08367 Peptidase M16C associated TPE_0403 PF00675 Insulinase (Peptidase family M16) TPE_0403 PF05193 Peptidase M16 inactive domain TPE_0404 PF00958 GMP synthase C terminal domain TPE_0404 PF01171 PP-loop family TPE_0404 PF00117 Glutamine amidotransferase class-I TPE_0406 PF00145 C-5 cytosine-specific DNA methylase TPE_0407 PF09561 HpaII restriction endonuclease TPE_0408 PF04480 Protein of unknown function (DUF559) TPE_0408 PF03852 DNA mismatch endonuclease Vsr TPE_0410 PF07475 HPr Serine kinase C-terminal domain TPE_0410 PF02603 HPr Serine kinase N terminus TPE_0411 PF00381 PTS HPr component phosphorylation site TPE_0414 PF00005 ABC transporter TPE_0414 PF02687 FtsX-like permease family TPE_0414 PF12704 MacB-like periplasmic core domain TPE_0415 PF12704 MacB-like periplasmic core domain TPE_0415 PF02687 FtsX-like permease family TPE_0415 PF00005 ABC transporter TPE_0417 PF00403 Heavy-metal-associated domain TPE_0419 PF08264 Anticodon-binding domain of tRNA TPE_0419 PF00133 tRNA synthetases class I (I, L, M and V) TPE_0419 PF10458 Valyl tRNA synthetase tRNA binding arm TPE_0420 PF00664 ABC transporter transmembrane region TPE_0420 PF00005 ABC transporter TPE_0422 PF01042 Endoribonuclease L-PSP TPE_0423 PF08032 RNA 2'-O ribose methyltransferase substrate binding TPE_0423 PF00588 SpoU rRNA Methylase family TPE_0425 PF00829 Ribosomal prokaryotic L21 protein TPE_0427 PF01016 Ribosomal L27 protein TPE_0428 PF01926 50S ribosome-binding GTPase TPE_0428 PF01018 GTP1/OBG TPE_0429 PF01467 Cytidylyltransferase-like TPE_0433 PF01869 BadF/BadG/BcrA/BcrD ATPase family TPE_0434 PF02743 Cache domain TPE_0434 PF00672 HAMP domain TPE_0434 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0442 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TPE_0443 PF00467 KOW motif TPE_0443 PF02357 Transcription termination factor nusG TPE_0444 PF00298 Ribosomal protein L11, RNA binding domain TPE_0444 PF03946 Ribosomal protein L11, N-terminal domain TPE_0445 PF00687 Ribosomal protein L1p/L10e family TPE_0446 PF00466 Ribosomal protein L10 TPE_0447 PF00542 Ribosomal protein L7/L12 C-terminal domain TPE_0447 PF16320 Ribosomal protein L7/L12 dimerisation domain TPE_0448 PF04565 RNA polymerase Rpb2, domain 3 TPE_0448 PF00562 RNA polymerase Rpb2, domain 6 TPE_0448 PF10385 RNA polymerase beta subunit external 1 domain TPE_0448 PF04561 RNA polymerase Rpb2, domain 2 TPE_0448 PF04563 RNA polymerase beta subunit TPE_0448 PF04560 RNA polymerase Rpb2, domain 7 TPE_0449 PF04998 RNA polymerase Rpb1, domain 5 TPE_0449 PF04997 RNA polymerase Rpb1, domain 1 TPE_0449 PF00623 RNA polymerase Rpb1, domain 2 TPE_0449 PF04983 RNA polymerase Rpb1, domain 3 TPE_0449 PF05000 RNA polymerase Rpb1, domain 4 TPE_0453 PF01541 GIY-YIG catalytic domain TPE_0453 PF08459 UvrC Helix-hairpin-helix N-terminal TPE_0453 PF02151 UvrB/uvrC motif TPE_0456 PF02073 Thermophilic metalloprotease (M29) TPE_0457 PF00266 Aminotransferase class-V TPE_0461 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPE_0461 PF03129 Anticodon binding domain TPE_0461 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_0462 PF07730 Histidine kinase TPE_0463 PF00270 DEAD/DEAH box helicase TPE_0463 PF00271 Helicase conserved C-terminal domain TPE_0463 PF04408 Helicase associated domain (HA2) TPE_0463 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TPE_0465 PF01268 Formate--tetrahydrofolate ligase TPE_0467 PF05343 M42 glutamyl aminopeptidase TPE_0470 PF00501 AMP-binding enzyme TPE_0472 PF17932 Tetracyclin repressor-like, C-terminal domain TPE_0472 PF00440 Bacterial regulatory proteins, tetR family TPE_0473 PF03616 Sodium/glutamate symporter TPE_0474 PF00005 ABC transporter TPE_0474 PF00664 ABC transporter transmembrane region TPE_0477 PF00005 ABC transporter TPE_0478 PF00005 ABC transporter TPE_0478 PF00664 ABC transporter transmembrane region TPE_0480 PF03484 tRNA synthetase B5 domain TPE_0480 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TPE_0481 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_0481 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_0482 PF01813 ATP synthase subunit D TPE_0485 PF13277 YmdB-like protein TPE_0488 PF03477 ATP cone domain TPE_0488 PF00317 Ribonucleotide reductase, all-alpha domain TPE_0488 PF02867 Ribonucleotide reductase, barrel domain TPE_0490 PF00266 Aminotransferase class-V TPE_0491 PF01761 3-dehydroquinate synthase TPE_0492 PF01048 Phosphorylase superfamily TPE_0493 PF00571 CBS domain TPE_0493 PF03471 Transporter associated domain TPE_0493 PF01595 Cyclin M transmembrane N-terminal domain TPE_0494 PF00571 CBS domain TPE_0494 PF03471 Transporter associated domain TPE_0494 PF01595 Cyclin M transmembrane N-terminal domain TPE_0496 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_0497 PF00005 ABC transporter TPE_0497 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_0498 PF00005 ABC transporter TPE_0498 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_0499 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_0500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_0501 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_0501 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0502 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0509 PF00990 Diguanylate cyclase, GGDEF domain TPE_0509 PF00072 Response regulator receiver domain TPE_0510 PF00990 Diguanylate cyclase, GGDEF domain TPE_0516 PF01081 KDPG and KHG aldolase TPE_0520 PF12729 Four helix bundle sensory module for signal transduction TPE_0520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0520 PF00672 HAMP domain TPE_0523 PF01627 Hpt domain TPE_0523 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TPE_0523 PF00672 HAMP domain TPE_0523 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_0523 PF00512 His Kinase A (phospho-acceptor) domain TPE_0523 PF00072 Response regulator receiver domain TPE_0524 PF00072 Response regulator receiver domain TPE_0526 PF08241 Methyltransferase domain TPE_0529 PF00753 Metallo-beta-lactamase superfamily TPE_0532 PF00075 RNase H TPE_0533 PF00793 DAHP synthetase I family TPE_0534 PF02568 Thiamine biosynthesis protein (ThiI) TPE_0534 PF02926 THUMP domain TPE_0536 PF00005 ABC transporter TPE_0539 PF12169 DNA polymerase III subunits gamma and tau domain III TPE_0540 PF00183 Hsp90 protein TPE_0543 PF04539 Sigma-70 region 3 TPE_0543 PF04542 Sigma-70 region 2 TPE_0543 PF00140 Sigma-70 factor, region 1.2 TPE_0543 PF03979 Sigma-70 factor, region 1.1 TPE_0543 PF04545 Sigma-70, region 4 TPE_0547 PF01812 5-formyltetrahydrofolate cyclo-ligase family TPE_0548 PF00497 Bacterial extracellular solute-binding proteins, family 3 TPE_0551 PF00080 Copper/zinc superoxide dismutase (SODC) TPE_0553 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_0553 PF07196 Flagellin hook IN motif TPE_0554 PF07196 Flagellin hook IN motif TPE_0554 PF00669 Bacterial flagellin N-terminal helical region TPE_0554 PF00700 Bacterial flagellin C-terminal helical region TPE_0555 PF02743 Cache domain TPE_0555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0555 PF00672 HAMP domain TPE_0558 PF01026 TatD related DNase TPE_0559 PF01207 Dihydrouridine synthase (Dus) TPE_0560 PF08011 PD-(D/E)XK nuclease superfamily TPE_0560 PF09820 Predicted AAA-ATPase TPE_0561 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_0563 PF00258 Flavodoxin TPE_0567 PF01066 CDP-alcohol phosphatidyltransferase TPE_0568 PF00953 Glycosyl transferase family 4 TPE_0569 PF00448 SRP54-type protein, GTPase domain TPE_0570 PF10609 NUBPL iron-transfer P-loop NTPase TPE_0572 PF04545 Sigma-70, region 4 TPE_0572 PF04539 Sigma-70 region 3 TPE_0572 PF04542 Sigma-70 region 2 TPE_0578 PF00268 Ribonucleotide reductase, small chain TPE_0579 PF01594 AI-2E family transporter TPE_0580 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TPE_0581 PF00085 Thioredoxin TPE_0582 PF00085 Thioredoxin TPE_0584 PF01791 DeoC/LacD family aldolase TPE_0585 PF09820 Predicted AAA-ATPase TPE_0585 PF08011 PD-(D/E)XK nuclease superfamily TPE_0586 PF03009 Glycerophosphoryl diester phosphodiesterase family TPE_0587 PF00156 Phosphoribosyl transferase domain TPE_0588 PF05746 DALR anticodon binding domain TPE_0588 PF03485 Arginyl tRNA synthetase N terminal domain TPE_0588 PF00750 tRNA synthetases class I (R) TPE_0589 PF17863 AAA lid domain TPE_0589 PF07726 ATPase family associated with various cellular activities (AAA) TPE_0598 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ TPE_0599 PF14572 Phosphoribosyl synthetase-associated domain TPE_0599 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TPE_0601 PF00813 FliP family TPE_0603 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TPE_0603 PF04509 CheC-like family TPE_0604 PF02154 Flagellar motor switch protein FliM TPE_0604 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TPE_0605 PF03748 Flagellar basal body-associated protein FliL TPE_0606 PF13677 Membrane MotB of proton-channel complex MotA/MotB TPE_0606 PF00691 OmpA family TPE_0607 PF01618 MotA/TolQ/ExbB proton channel family TPE_0609 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_0609 PF00460 Flagella basal body rod protein TPE_0609 PF07559 Flagellar basal body protein FlaE TPE_0610 PF03963 Flagellar hook capping protein - N-terminal region TPE_0612 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_0613 PF11761 Cobalamin biosynthesis central region TPE_0613 PF11760 Cobalamin synthesis G N-terminal TPE_0613 PF01890 Cobalamin synthesis G C-terminus TPE_0616 PF00005 ABC transporter TPE_0620 PF12705 PD-(D/E)XK nuclease superfamily TPE_0621 PF12705 PD-(D/E)XK nuclease superfamily TPE_0621 PF00580 UvrD/REP helicase N-terminal domain TPE_0621 PF13361 UvrD-like helicase C-terminal domain TPE_0623 PF00005 ABC transporter TPE_0624 PF00950 ABC 3 transport family TPE_0630 PF14492 Elongation Factor G, domain II TPE_0630 PF03144 Elongation factor Tu domain 2 TPE_0630 PF00009 Elongation factor Tu GTP binding domain TPE_0630 PF00679 Elongation factor G C-terminus TPE_0630 PF03764 Elongation factor G, domain IV TPE_0636 PF01170 Putative RNA methylase family UPF0020 TPE_0636 PF02926 THUMP domain TPE_0639 PF03412 Peptidase C39 family TPE_0639 PF00005 ABC transporter TPE_0639 PF00664 ABC transporter transmembrane region TPE_0640 PF00664 ABC transporter transmembrane region TPE_0640 PF00005 ABC transporter TPE_0647 PF02086 D12 class N6 adenine-specific DNA methyltransferase TPE_0648 PF02086 D12 class N6 adenine-specific DNA methyltransferase TPE_0653 PF00005 ABC transporter TPE_0660 PF00149 Calcineurin-like phosphoesterase TPE_0660 PF02872 5'-nucleotidase, C-terminal domain TPE_0662 PF10509 Galactokinase galactose-binding signature TPE_0662 PF08544 GHMP kinases C terminal TPE_0662 PF00288 GHMP kinases N terminal domain TPE_0663 PF00342 Phosphoglucose isomerase TPE_0664 PF01926 50S ribosome-binding GTPase TPE_0666 PF13193 AMP-binding enzyme C-terminal domain TPE_0666 PF00501 AMP-binding enzyme TPE_0672 PF01409 tRNA synthetases class II core domain (F) TPE_0674 PF07687 Peptidase dimerisation domain TPE_0674 PF01546 Peptidase family M20/M25/M40 TPE_0678 PF00005 ABC transporter TPE_0688 PF09827 CRISPR associated protein Cas2 TPE_0690 PF18470 Cas9 alpha-helical lobe domain TPE_0690 PF18070 CRISPR-Cas9 PI domain TPE_0690 PF18541 RuvC endonuclease subdomain 3 TPE_0690 PF13395 HNH endonuclease TPE_0690 PF18061 CRISPR-Cas9 WED domain TPE_0695 PF00664 ABC transporter transmembrane region TPE_0695 PF00005 ABC transporter TPE_0696 PF00005 ABC transporter TPE_0696 PF00664 ABC transporter transmembrane region TPE_0698 PF00005 ABC transporter TPE_0700 PF12833 Helix-turn-helix domain TPE_0700 PF02311 AraC-like ligand binding domain TPE_0706 PF04607 Region found in RelA / SpoT proteins TPE_0707 PF00883 Cytosol aminopeptidase family, catalytic domain TPE_0707 PF02789 Cytosol aminopeptidase family, N-terminal domain TPE_0713 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family TPE_0714 PF00005 ABC transporter TPE_0714 PF00664 ABC transporter transmembrane region TPE_0716 PF03448 MgtE intracellular N domain TPE_0716 PF01769 Divalent cation transporter TPE_0716 PF00571 CBS domain TPE_0721 PF00271 Helicase conserved C-terminal domain TPE_0721 PF04851 Type III restriction enzyme, res subunit TPE_0721 PF02151 UvrB/uvrC motif TPE_0721 PF12344 Ultra-violet resistance protein B TPE_0721 PF17757 UvrB interaction domain TPE_0725 PF00326 Prolyl oligopeptidase family TPE_0725 PF07676 WD40-like Beta Propeller Repeat TPE_0727 PF01979 Amidohydrolase family TPE_0729 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TPE_0729 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TPE_0729 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TPE_0731 PF01204 Trehalase TPE_0732 PF03129 Anticodon binding domain TPE_0732 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_0736 PF00933 Glycosyl hydrolase family 3 N terminal domain TPE_0736 PF01915 Glycosyl hydrolase family 3 C-terminal domain TPE_0739 PF02557 D-alanyl-D-alanine carboxypeptidase TPE_0740 PF01740 STAS domain TPE_0743 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TPE_0743 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TPE_0746 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TPE_0746 PF00326 Prolyl oligopeptidase family TPE_0747 PF03960 ArsC family TPE_0750 PF01725 Ham1 family TPE_0751 PF01207 Dihydrouridine synthase (Dus) TPE_0752 PF01235 Sodium:alanine symporter family TPE_0753 PF00708 Acylphosphatase TPE_0757 PF00128 Alpha amylase, catalytic domain TPE_0757 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TPE_0759 PF00375 Sodium:dicarboxylate symporter family TPE_0760 PF00291 Pyridoxal-phosphate dependent enzyme TPE_0762 PF00749 tRNA synthetases class I (E and Q), catalytic domain TPE_0763 PF13180 PDZ domain TPE_0764 PF01139 tRNA-splicing ligase RtcB TPE_0765 PF00464 Serine hydroxymethyltransferase TPE_0766 PF01588 Putative tRNA binding domain TPE_0766 PF09334 tRNA synthetases class I (M) TPE_0767 PF10437 Bacterial lipoate protein ligase C-terminus TPE_0767 PF03099 Biotin/lipoate A/B protein ligase family TPE_0768 PF04055 Radical SAM superfamily TPE_0768 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TPE_0769 PF01841 Transglutaminase-like superfamily TPE_0772 PF01406 tRNA synthetases class I (C) catalytic domain TPE_0772 PF09190 DALR domain TPE_0773 PF01145 SPFH domain / Band 7 family TPE_0774 PF01145 SPFH domain / Band 7 family TPE_0775 PF01226 Formate/nitrite transporter TPE_0776 PF02768 DNA polymerase III beta subunit, C-terminal domain TPE_0776 PF02767 DNA polymerase III beta subunit, central domain TPE_0776 PF00712 DNA polymerase III beta subunit, N-terminal domain TPE_0777 PF02463 RecF/RecN/SMC N terminal domain TPE_0778 PF13649 Methyltransferase domain TPE_0783 PF00962 Adenosine/AMP deaminase TPE_0785 PF01430 Hsp33 protein TPE_0787 PF02547 Queuosine biosynthesis protein TPE_0790 PF00005 ABC transporter TPE_0792 PF08264 Anticodon-binding domain of tRNA TPE_0792 PF00133 tRNA synthetases class I (I, L, M and V) TPE_0793 PF04225 Opacity-associated protein A LysM-like domain TPE_0793 PF01551 Peptidase family M23 TPE_0795 PF03885 Protein of unknown function (DUF327) TPE_0796 PF04468 PSP1 C-terminal conserved region TPE_0799 PF03824 High-affinity nickel-transport protein TPE_0801 PF00672 HAMP domain TPE_0801 PF02743 Cache domain TPE_0801 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0803 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TPE_0803 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TPE_0803 PF10371 Domain of unknown function TPE_0803 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPE_0803 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPE_0805 PF00664 ABC transporter transmembrane region TPE_0805 PF00005 ABC transporter TPE_0806 PF03412 Peptidase C39 family TPE_0806 PF00005 ABC transporter TPE_0806 PF00664 ABC transporter transmembrane region TPE_0810 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain TPE_0810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TPE_0810 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain TPE_0810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TPE_0811 PF00730 HhH-GPD superfamily base excision DNA repair protein TPE_0812 PF17854 FtsK alpha domain TPE_0812 PF01580 FtsK/SpoIIIE family TPE_0812 PF09397 Ftsk gamma domain TPE_0813 PF02673 Bacitracin resistance protein BacA TPE_0816 PF07685 CobB/CobQ-like glutamine amidotransferase domain TPE_0817 PF13932 GidA associated domain TPE_0817 PF01134 Glucose inhibited division protein A TPE_0818 PF02127 Aminopeptidase I zinc metalloprotease (M18) TPE_0820 PF03030 Inorganic H+ pyrophosphatase TPE_0821 PF00210 Ferritin-like domain TPE_0822 PF00326 Prolyl oligopeptidase family TPE_0822 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TPE_0824 PF16360 GTP-binding GTPase Middle Region TPE_0824 PF13167 GTP-binding GTPase N-terminal TPE_0824 PF01926 50S ribosome-binding GTPase TPE_0825 PF08543 Phosphomethylpyrimidine kinase TPE_0827 PF02971 Formiminotransferase domain TPE_0827 PF07837 Formiminotransferase domain, N-terminal subdomain TPE_0828 PF00155 Aminotransferase class I and II TPE_0831 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_0833 PF01048 Phosphorylase superfamily TPE_0834 PF17191 RecG wedge domain TPE_0834 PF00271 Helicase conserved C-terminal domain TPE_0834 PF00270 DEAD/DEAH box helicase TPE_0835 PF07683 Cobalamin synthesis protein cobW C-terminal domain TPE_0835 PF02492 CobW/HypB/UreG, nucleotide-binding domain TPE_0836 PF08240 Alcohol dehydrogenase GroES-like domain TPE_0836 PF00107 Zinc-binding dehydrogenase TPE_0837 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_0837 PF00005 ABC transporter TPE_0838 PF00005 ABC transporter TPE_0838 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_0839 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0839 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_0840 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0841 PF00274 Fructose-bisphosphate aldolase class-I TPE_0842 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_0842 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPE_0844 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system TPE_0846 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system TPE_0848 PF01963 TraB family TPE_0851 PF04024 PspC domain TPE_0852 PF02561 Flagellar protein FliS TPE_0854 PF00271 Helicase conserved C-terminal domain TPE_0854 PF00176 SNF2 family N-terminal domain TPE_0854 PF12419 SNF2 Helicase protein TPE_0855 PF00672 HAMP domain TPE_0855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0857 PF00255 Glutathione peroxidase TPE_0858 PF00440 Bacterial regulatory proteins, tetR family TPE_0858 PF08361 MAATS-type transcriptional repressor, C-terminal region TPE_0859 PF08003 Protein of unknown function (DUF1698) TPE_0860 PF04191 Phospholipid methyltransferase TPE_0861 PF00664 ABC transporter transmembrane region TPE_0861 PF00005 ABC transporter TPE_0864 PF01497 Periplasmic binding protein TPE_0866 PF00005 ABC transporter TPE_0867 PF01032 FecCD transport family TPE_0869 PF08241 Methyltransferase domain TPE_0881 PF00664 ABC transporter transmembrane region TPE_0881 PF00005 ABC transporter TPE_0884 PF17239 Family of unknown function (DUF5312) TPE_0888 PF01180 Dihydroorotate dehydrogenase TPE_0889 PF08245 Mur ligase middle domain TPE_0889 PF01225 Mur ligase family, catalytic domain TPE_0889 PF02875 Mur ligase family, glutamate ligase domain TPE_0892 PF03773 Predicted permease TPE_0894 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TPE_0894 PF14579 Helix-hairpin-helix motif TPE_0894 PF02811 PHP domain TPE_0894 PF07733 Bacterial DNA polymerase III alpha NTPase domain TPE_0896 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0896 PF02743 Cache domain TPE_0896 PF00672 HAMP domain TPE_0897 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_0897 PF04324 BFD-like [2Fe-2S] binding domain TPE_0898 PF00005 ABC transporter TPE_0902 PF01171 PP-loop family TPE_0903 PF01925 Sulfite exporter TauE/SafE TPE_0905 PF02082 Transcriptional regulator TPE_0906 PF13460 NAD(P)H-binding TPE_0907 PF08666 SAF domain TPE_0907 PF03102 NeuB family TPE_0910 PF11799 impB/mucB/samB family C-terminal domain TPE_0910 PF00817 impB/mucB/samB family TPE_0910 PF11798 IMS family HHH motif TPE_0914 PF00005 ABC transporter TPE_0918 PF00037 4Fe-4S binding domain TPE_0918 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPE_0918 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPE_0919 PF02906 Iron only hydrogenase large subunit, C-terminal domain TPE_0919 PF00037 4Fe-4S binding domain TPE_0919 PF02256 Iron hydrogenase small subunit TPE_0919 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPE_0922 PF03062 MBOAT, membrane-bound O-acyltransferase family TPE_0923 PF00005 ABC transporter TPE_0923 PF08402 TOBE domain TPE_0924 PF00210 Ferritin-like domain TPE_0925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0925 PF02743 Cache domain TPE_0925 PF00672 HAMP domain TPE_0930 PF01206 Sulfurtransferase TusA TPE_0932 PF00586 AIR synthase related protein, N-terminal domain TPE_0932 PF02769 AIR synthase related protein, C-terminal domain TPE_0935 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0936 PF00005 ABC transporter TPE_0938 PF00005 ABC transporter TPE_0939 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TPE_0942 PF00436 Single-strand binding protein family TPE_0943 PF00731 AIR carboxylase TPE_0944 PF03600 Citrate transporter TPE_0945 PF09820 Predicted AAA-ATPase TPE_0945 PF08011 PD-(D/E)XK nuclease superfamily TPE_0948 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_0949 PF00528 Binding-protein-dependent transport system inner membrane component TPE_0951 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_0951 PF00005 ABC transporter TPE_0952 PF00005 ABC transporter TPE_0952 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_0953 PF00664 ABC transporter transmembrane region TPE_0953 PF00005 ABC transporter TPE_0954 PF00005 ABC transporter TPE_0954 PF00664 ABC transporter transmembrane region TPE_0958 PF09820 Predicted AAA-ATPase TPE_0958 PF08011 PD-(D/E)XK nuclease superfamily TPE_0960 PF00575 S1 RNA binding domain TPE_0960 PF03725 3' exoribonuclease family, domain 2 TPE_0960 PF01138 3' exoribonuclease family, domain 1 TPE_0960 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TPE_0960 PF00013 KH domain TPE_0961 PF00312 Ribosomal protein S15 TPE_0962 PF01687 Riboflavin kinase TPE_0962 PF06574 FAD synthetase TPE_0963 PF00672 HAMP domain TPE_0963 PF02743 Cache domain TPE_0963 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_0968 PF00899 ThiF family TPE_0969 PF00953 Glycosyl transferase family 4 TPE_0971 PF00860 Permease family TPE_0973 PF01569 PAP2 superfamily TPE_0974 PF01926 50S ribosome-binding GTPase TPE_0974 PF10396 GTP-binding protein TrmE N-terminus TPE_0974 PF12631 MnmE helical domain TPE_0976 PF10502 Signal peptidase, peptidase S26 TPE_0979 PF04055 Radical SAM superfamily TPE_0979 PF18693 TRAM domain TPE_0979 PF00919 Uncharacterized protein family UPF0004 TPE_0982 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_0982 PF00672 HAMP domain TPE_0983 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_0984 PF13419 Haloacid dehalogenase-like hydrolase TPE_0985 PF00501 AMP-binding enzyme TPE_0985 PF13193 AMP-binding enzyme C-terminal domain TPE_0986 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_0988 PF01661 Macro domain TPE_0990 PF00005 ABC transporter TPE_0993 PF00145 C-5 cytosine-specific DNA methylase TPE_0993 PF01381 Helix-turn-helix TPE_0994 PF00004 ATPase family associated with various cellular activities (AAA) TPE_0994 PF17862 AAA+ lid domain TPE_0994 PF01434 Peptidase family M41 TPE_0994 PF06480 FtsH Extracellular TPE_0997 PF07669 Eco57I restriction-modification methylase TPE_1008 PF03069 Acetamidase/Formamidase family TPE_1020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TPE_1020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TPE_1022 PF12392 Collagenase TPE_1022 PF01136 Peptidase family U32 TPE_1023 PF02540 NAD synthase TPE_1024 PF00664 ABC transporter transmembrane region TPE_1024 PF00005 ABC transporter TPE_1027 PF00664 ABC transporter transmembrane region TPE_1027 PF00005 ABC transporter TPE_1028 PF00005 ABC transporter TPE_1028 PF00664 ABC transporter transmembrane region TPE_1031 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TPE_1031 PF12557 Cob(I)alamin adenosyltransferase N terminal TPE_1032 PF17762 HTH domain found in ParB protein TPE_1032 PF02195 ParB-like nuclease domain TPE_1033 PF13614 AAA domain TPE_1035 PF02743 Cache domain TPE_1035 PF00672 HAMP domain TPE_1035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1039 PF00392 Bacterial regulatory proteins, gntR family TPE_1039 PF07729 FCD domain TPE_1040 PF03390 2-hydroxycarboxylate transporter family TPE_1041 PF00364 Biotin-requiring enzyme TPE_1041 PF00682 HMGL-like TPE_1041 PF02436 Conserved carboxylase domain TPE_1043 PF00364 Biotin-requiring enzyme TPE_1044 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TPE_1045 PF06857 Malonate decarboxylase delta subunit (MdcD) TPE_1046 PF03328 HpcH/HpaI aldolase/citrate lyase family TPE_1047 PF04223 Citrate lyase, alpha subunit (CitF) TPE_1052 PF01343 Peptidase family S49 TPE_1053 PF06071 Protein of unknown function (DUF933) TPE_1053 PF01926 50S ribosome-binding GTPase TPE_1057 PF08245 Mur ligase middle domain TPE_1057 PF02875 Mur ligase family, glutamate ligase domain TPE_1058 PF02608 ABC transporter substrate-binding protein PnrA-like TPE_1059 PF00005 ABC transporter TPE_1060 PF02653 Branched-chain amino acid transport system / permease component TPE_1061 PF02653 Branched-chain amino acid transport system / permease component TPE_1062 PF13941 MutL protein TPE_1063 PF02310 B12 binding domain TPE_1065 PF00005 ABC transporter TPE_1066 PF01266 FAD dependent oxidoreductase TPE_1070 PF01515 Phosphate acetyl/butaryl transferase TPE_1071 PF13176 Tetratricopeptide repeat TPE_1071 PF13174 Tetratricopeptide repeat TPE_1072 PF01432 Peptidase family M3 TPE_1072 PF08439 Oligopeptidase F TPE_1073 PF00004 ATPase family associated with various cellular activities (AAA) TPE_1073 PF10431 C-terminal, D2-small domain, of ClpB protein TPE_1073 PF17871 AAA lid domain TPE_1073 PF02861 Clp amino terminal domain, pathogenicity island component TPE_1073 PF07724 AAA domain (Cdc48 subfamily) TPE_1074 PF01202 Shikimate kinase TPE_1076 PF01416 tRNA pseudouridine synthase TPE_1077 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) TPE_1080 PF01680 SOR/SNZ family TPE_1083 PF01066 CDP-alcohol phosphatidyltransferase TPE_1085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1085 PF02743 Cache domain TPE_1085 PF00672 HAMP domain TPE_1087 PF10431 C-terminal, D2-small domain, of ClpB protein TPE_1087 PF06689 ClpX C4-type zinc finger TPE_1087 PF07724 AAA domain (Cdc48 subfamily) TPE_1088 PF00574 Clp protease TPE_1089 PF05698 Bacterial trigger factor protein (TF) C-terminus TPE_1089 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPE_1089 PF05697 Bacterial trigger factor protein (TF) TPE_1090 PF00155 Aminotransferase class I and II TPE_1093 PF00072 Response regulator receiver domain TPE_1095 PF01584 CheW-like domain TPE_1096 PF01584 CheW-like domain TPE_1096 PF07194 P2 response regulator binding domain TPE_1096 PF01627 Hpt domain TPE_1096 PF02895 Signal transducing histidine kinase, homodimeric domain TPE_1096 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_1099 PF00814 Glycoprotease family TPE_1102 PF01106 NifU-like domain TPE_1102 PF01521 Iron-sulphur cluster biosynthesis TPE_1103 PF00692 dUTPase TPE_1104 PF16258 Domain of unknown function (DUF4912) TPE_1106 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_1106 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TPE_1107 PF00175 Oxidoreductase NAD-binding domain TPE_1107 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TPE_1107 PF00970 Oxidoreductase FAD-binding domain TPE_1113 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TPE_1115 PF00111 2Fe-2S iron-sulfur cluster binding domain TPE_1115 PF01799 [2Fe-2S] binding domain TPE_1116 PF00941 FAD binding domain in molybdopterin dehydrogenase TPE_1116 PF03450 CO dehydrogenase flavoprotein C-terminal domain TPE_1118 PF00154 recA bacterial DNA recombination protein TPE_1119 PF01313 Bacterial export proteins, family 3 TPE_1120 PF01311 Bacterial export proteins, family 1 TPE_1121 PF01312 FlhB HrpN YscU SpaS Family TPE_1122 PF00771 FHIPEP family TPE_1126 PF00403 Heavy-metal-associated domain TPE_1128 PF02954 Bacterial regulatory protein, Fis family TPE_1128 PF00158 Sigma-54 interaction domain TPE_1128 PF00072 Response regulator receiver domain TPE_1132 PF00834 Ribulose-phosphate 3 epimerase family TPE_1137 PF00005 ABC transporter TPE_1139 PF04225 Opacity-associated protein A LysM-like domain TPE_1139 PF01551 Peptidase family M23 TPE_1140 PF00013 KH domain TPE_1140 PF01966 HD domain TPE_1140 PF12072 Domain of unknown function (DUF3552) TPE_1144 PF00521 DNA gyrase/topoisomerase IV, subunit A TPE_1145 PF01497 Periplasmic binding protein TPE_1146 PF01032 FecCD transport family TPE_1147 PF00005 ABC transporter TPE_1151 PF00664 ABC transporter transmembrane region TPE_1151 PF00005 ABC transporter TPE_1152 PF03412 Peptidase C39 family TPE_1152 PF00005 ABC transporter TPE_1152 PF00664 ABC transporter transmembrane region TPE_1160 PF00005 ABC transporter TPE_1162 PF00005 ABC transporter TPE_1163 PF02571 Precorrin-6x reductase CbiJ/CobK TPE_1164 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_1164 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TPE_1165 PF02743 Cache domain TPE_1165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1165 PF00672 HAMP domain TPE_1166 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TPE_1166 PF07685 CobB/CobQ-like glutamine amidotransferase domain TPE_1167 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_1168 PF06180 Cobalt chelatase (CbiK) TPE_1170 PF02743 Cache domain TPE_1170 PF00672 HAMP domain TPE_1170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1171 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPE_1171 PF10531 SLBB domain TPE_1171 PF13237 4Fe-4S dicluster domain TPE_1171 PF13375 RnfC Barrel sandwich hybrid domain TPE_1172 PF03116 NQR2, RnfD, RnfE family TPE_1173 PF04205 FMN-binding domain TPE_1174 PF02508 Rnf-Nqr subunit, membrane protein TPE_1175 PF02508 Rnf-Nqr subunit, membrane protein TPE_1176 PF07476 Methylaspartate ammonia-lyase C-terminus TPE_1176 PF05034 Methylaspartate ammonia-lyase N-terminus TPE_1179 PF02021 Uncharacterised protein family UPF0102 TPE_1180 PF00072 Response regulator receiver domain TPE_1181 PF01312 FlhB HrpN YscU SpaS Family TPE_1183 PF04452 RNA methyltransferase TPE_1185 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TPE_1185 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TPE_1187 PF00849 RNA pseudouridylate synthase TPE_1187 PF01479 S4 domain TPE_1188 PF02527 rRNA small subunit methyltransferase G TPE_1189 PF00171 Aldehyde dehydrogenase family TPE_1190 PF03553 Na+/H+ antiporter family TPE_1191 PF06368 Methylaspartate mutase E chain (MutE) TPE_1192 PF00266 Aminotransferase class-V TPE_1195 PF03880 DbpA RNA binding domain TPE_1197 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_1198 PF01554 MatE TPE_1199 PF00149 Calcineurin-like phosphoesterase TPE_1200 PF13476 AAA domain TPE_1205 PF14353 CpXC protein TPE_1206 PF00849 RNA pseudouridylate synthase TPE_1206 PF01479 S4 domain TPE_1211 PF00561 alpha/beta hydrolase fold TPE_1216 PF01425 Amidase TPE_1220 PF00027 Cyclic nucleotide-binding domain TPE_1220 PF13545 Crp-like helix-turn-helix domain TPE_1223 PF01613 Flavin reductase like domain TPE_1223 PF00753 Metallo-beta-lactamase superfamily TPE_1226 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_1228 PF00085 Thioredoxin TPE_1229 PF04723 Glycine reductase complex selenoprotein A TPE_1230 PF04723 Glycine reductase complex selenoprotein A TPE_1231 PF03006 Haemolysin-III related TPE_1233 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPE_1241 PF01494 FAD binding domain TPE_1242 PF01209 ubiE/COQ5 methyltransferase family TPE_1244 PF00348 Polyprenyl synthetase TPE_1245 PF11870 Domain of unknown function (DUF3390) TPE_1245 PF13183 4Fe-4S dicluster domain TPE_1245 PF02589 LUD domain TPE_1248 PF00005 ABC transporter TPE_1249 PF02374 Anion-transporting ATPase TPE_1249 PF17886 HSP20-like domain found in ArsA TPE_1250 PF17886 HSP20-like domain found in ArsA TPE_1250 PF02374 Anion-transporting ATPase TPE_1251 PF02652 L-lactate permease TPE_1252 PF01012 Electron transfer flavoprotein domain TPE_1253 PF00766 Electron transfer flavoprotein FAD-binding domain TPE_1253 PF01012 Electron transfer flavoprotein domain TPE_1255 PF08011 PD-(D/E)XK nuclease superfamily TPE_1255 PF09820 Predicted AAA-ATPase TPE_1280 PF01555 DNA methylase TPE_1282 PF01934 Protein of unknown function DUF86 TPE_1285 PF13195 Protein of unknown function (DUF4011) TPE_1285 PF13086 AAA domain TPE_1285 PF13087 AAA domain TPE_1301 PF00300 Histidine phosphatase superfamily (branch 1) TPE_1306 PF04055 Radical SAM superfamily TPE_1306 PF06463 Molybdenum Cofactor Synthesis C TPE_1310 PF12728 Helix-turn-helix domain TPE_1310 PF02661 Fic/DOC family TPE_1327 PF01048 Phosphorylase superfamily TPE_1362 PF05076 Suppressor of fused protein (SUFU) TPE_1364 PF00561 alpha/beta hydrolase fold TPE_1370 PF00664 ABC transporter transmembrane region TPE_1370 PF00005 ABC transporter TPE_1379 PF00248 Aldo/keto reductase family TPE_1382 PF00672 HAMP domain TPE_1382 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1389 PF09820 Predicted AAA-ATPase TPE_1389 PF08011 PD-(D/E)XK nuclease superfamily TPE_1390 PF12833 Helix-turn-helix domain TPE_1390 PF02311 AraC-like ligand binding domain TPE_1391 PF00664 ABC transporter transmembrane region TPE_1391 PF00005 ABC transporter TPE_1392 PF00005 ABC transporter TPE_1392 PF00664 ABC transporter transmembrane region TPE_1403 PF03601 Conserved hypothetical protein 698 TPE_1405 PF00005 ABC transporter TPE_1408 PF00672 HAMP domain TPE_1408 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1408 PF02743 Cache domain TPE_1410 PF03537 Glycoside-hydrolase family GH114 TPE_1411 PF02608 ABC transporter substrate-binding protein PnrA-like TPE_1417 PF00162 Phosphoglycerate kinase TPE_1419 PF01520 N-acetylmuramoyl-L-alanine amidase TPE_1421 PF04620 Flagellar filament outer layer protein Flaa TPE_1423 PF01649 Ribosomal protein S20 TPE_1424 PF00216 Bacterial DNA-binding protein TPE_1425 PF00795 Carbon-nitrogen hydrolase TPE_1427 PF02464 Competence-damaged protein TPE_1427 PF00994 Probable molybdopterin binding domain TPE_1427 PF18146 Damage-inducible protein CinA KH domain TPE_1428 PF00892 EamA-like transporter family TPE_1429 PF03313 Serine dehydratase alpha chain TPE_1430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1430 PF02743 Cache domain TPE_1430 PF00672 HAMP domain TPE_1431 PF13735 tRNA nucleotidyltransferase domain 2 putative TPE_1431 PF12627 Probable RNA and SrmB- binding site of polymerase A TPE_1431 PF01743 Poly A polymerase head domain TPE_1433 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPE_1433 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_1435 PF00664 ABC transporter transmembrane region TPE_1435 PF00005 ABC transporter TPE_1436 PF00005 ABC transporter TPE_1436 PF00664 ABC transporter transmembrane region TPE_1440 PF01702 Queuine tRNA-ribosyltransferase TPE_1441 PF12850 Calcineurin-like phosphoesterase superfamily domain TPE_1444 PF03948 Ribosomal protein L9, C-terminal domain TPE_1444 PF01281 Ribosomal protein L9, N-terminal domain TPE_1445 PF01084 Ribosomal protein S18 TPE_1446 PF00436 Single-strand binding protein family TPE_1447 PF01250 Ribosomal protein S6 TPE_1448 PF05488 PAAR motif TPE_1448 PF05593 RHS Repeat TPE_1450 PF05593 RHS Repeat TPE_1450 PF14220 Domain of unknown function (DUF4329) TPE_1450 PF03527 RHS protein TPE_1454 PF00860 Permease family TPE_1457 PF01888 CbiD TPE_1458 PF01228 Glycine radical TPE_1458 PF02901 Pyruvate formate lyase-like TPE_1459 PF04055 Radical SAM superfamily TPE_1460 PF00011 Hsp20/alpha crystallin family TPE_1461 PF16314 Domain of unknown function (DUF4954) TPE_1465 PF00005 ABC transporter TPE_1465 PF00664 ABC transporter transmembrane region TPE_1466 PF00005 ABC transporter TPE_1466 PF00664 ABC transporter transmembrane region TPE_1467 PF00005 ABC transporter TPE_1468 PF01032 FecCD transport family TPE_1469 PF01497 Periplasmic binding protein TPE_1471 PF17200 Single Cache domain 2 TPE_1471 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1471 PF00672 HAMP domain TPE_1473 PF01339 CheB methylesterase TPE_1473 PF00072 Response regulator receiver domain TPE_1474 PF03705 CheR methyltransferase, all-alpha domain TPE_1474 PF01739 CheR methyltransferase, SAM binding domain TPE_1477 PF00005 ABC transporter TPE_1477 PF12399 Branched-chain amino acid ATP-binding cassette transporter TPE_1478 PF00890 FAD binding domain TPE_1478 PF03358 NADPH-dependent FMN reductase TPE_1478 PF04205 FMN-binding domain TPE_1479 PF01966 HD domain TPE_1481 PF07687 Peptidase dimerisation domain TPE_1481 PF01546 Peptidase family M20/M25/M40 TPE_1482 PF13393 Histidyl-tRNA synthetase TPE_1484 PF02654 Cobalamin-5-phosphate synthase TPE_1485 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TPE_1486 PF01713 Smr domain TPE_1486 PF00488 MutS domain V TPE_1495 PF01740 STAS domain TPE_1499 PF01212 Beta-eliminating lyase TPE_1500 PF00005 ABC transporter TPE_1502 PF00528 Binding-protein-dependent transport system inner membrane component TPE_1503 PF01991 ATP synthase (E/31 kDa) subunit TPE_1508 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TPE_1508 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TPE_1509 PF05872 Bacterial protein of unknown function (DUF853) TPE_1510 PF01212 Beta-eliminating lyase TPE_1511 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_1511 PF00005 ABC transporter TPE_1512 PF00005 ABC transporter TPE_1512 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_1515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_1516 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1516 PF00672 HAMP domain TPE_1516 PF02743 Cache domain TPE_1523 PF01496 V-type ATPase 116kDa subunit family TPE_1526 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TPE_1526 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TPE_1527 PF03840 Preprotein translocase SecG subunit TPE_1529 PF03462 PCRF domain TPE_1529 PF00472 RF-1 domain TPE_1530 PF05175 Methyltransferase small domain TPE_1530 PF17827 PrmC N-terminal domain TPE_1532 PF00288 GHMP kinases N terminal domain TPE_1532 PF08544 GHMP kinases C terminal TPE_1533 PF04026 SpoVG TPE_1534 PF01386 Ribosomal L25p family TPE_1534 PF14693 Ribosomal protein TL5, C-terminal domain TPE_1536 PF03764 Elongation factor G, domain IV TPE_1536 PF00009 Elongation factor Tu GTP binding domain TPE_1536 PF00679 Elongation factor G C-terminus TPE_1536 PF14492 Elongation Factor G, domain II TPE_1536 PF03144 Elongation factor Tu domain 2 TPE_1538 PF02915 Rubrerythrin TPE_1539 PF02690 Na+/Pi-cotransporter TPE_1542 PF13520 Amino acid permease TPE_1543 PF07722 Peptidase C26 TPE_1544 PF07498 Rho termination factor, N-terminal domain TPE_1544 PF07497 Rho termination factor, RNA-binding domain TPE_1544 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_1545 PF02618 YceG-like family TPE_1547 PF00753 Metallo-beta-lactamase superfamily TPE_1552 PF12002 MgsA AAA+ ATPase C terminal TPE_1552 PF16193 AAA C-terminal domain TPE_1552 PF00004 ATPase family associated with various cellular activities (AAA) TPE_1553 PF00005 ABC transporter TPE_1554 PF01458 Uncharacterized protein family (UPF0051) TPE_1556 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TPE_1556 PF03466 LysR substrate binding domain TPE_1557 PF00005 ABC transporter TPE_1560 PF08264 Anticodon-binding domain of tRNA TPE_1560 PF00133 tRNA synthetases class I (I, L, M and V) TPE_1560 PF13603 Leucyl-tRNA synthetase, Domain 2 TPE_1560 PF09334 tRNA synthetases class I (M) TPE_1565 PF09028 Mac 1 TPE_1567 PF06470 SMC proteins Flexible Hinge Domain TPE_1567 PF02463 RecF/RecN/SMC N terminal domain TPE_1569 PF13525 Outer membrane lipoprotein TPE_1646 PF06969 HemN C-terminal domain TPE_1646 PF04055 Radical SAM superfamily TPE_1648 PF00005 ABC transporter TPE_1649 PF01032 FecCD transport family TPE_1651 PF00557 Metallopeptidase family M24 TPE_1651 PF01321 Creatinase/Prolidase N-terminal domain TPE_1652 PF02843 Phosphoribosylglycinamide synthetase, C domain TPE_1652 PF02844 Phosphoribosylglycinamide synthetase, N domain TPE_1652 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TPE_1653 PF01820 D-ala D-ala ligase N-terminus TPE_1653 PF07478 D-ala D-ala ligase C-terminus TPE_1655 PF01256 Carbohydrate kinase TPE_1655 PF03853 YjeF-related protein N-terminus TPE_1657 PF03755 YicC-like family, N-terminal region TPE_1657 PF08340 Domain of unknown function (DUF1732) TPE_1658 PF08245 Mur ligase middle domain TPE_1658 PF02875 Mur ligase family, glutamate ligase domain TPE_1658 PF01225 Mur ligase family, catalytic domain TPE_1659 PF08245 Mur ligase middle domain TPE_1659 PF02875 Mur ligase family, glutamate ligase domain TPE_1660 PF00849 RNA pseudouridylate synthase TPE_1662 PF00398 Ribosomal RNA adenine dimethylase TPE_1663 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TPE_1665 PF01297 Zinc-uptake complex component A periplasmic TPE_1666 PF00186 Dihydrofolate reductase TPE_1667 PF00809 Pterin binding enzyme TPE_1668 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TPE_1668 PF02152 Dihydroneopterin aldolase TPE_1669 PF01464 Transglycosylase SLT domain TPE_1669 PF10145 Phage-related minor tail protein TPE_1669 PF01551 Peptidase family M23 TPE_1671 PF08281 Sigma-70, region 4 TPE_1671 PF04542 Sigma-70 region 2 TPE_1674 PF08544 GHMP kinases C terminal TPE_1674 PF10509 Galactokinase galactose-binding signature TPE_1675 PF00795 Carbon-nitrogen hydrolase TPE_1676 PF02554 Carbon starvation protein CstA TPE_1677 PF03819 MazG nucleotide pyrophosphohydrolase domain TPE_1680 PF03572 Peptidase family S41 TPE_1680 PF13180 PDZ domain TPE_1682 PF01554 MatE TPE_1686 PF00696 Amino acid kinase family TPE_1690 PF06733 DEAD_2 TPE_1690 PF13307 Helicase C-terminal domain TPE_1694 PF18807 Tripartite Tc toxins repeat TPE_1694 PF05785 Rho-activating domain of cytotoxic necrotizing factor TPE_1733 PF08032 RNA 2'-O ribose methyltransferase substrate binding TPE_1733 PF00588 SpoU rRNA Methylase family TPE_1734 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TPE_1734 PF00753 Metallo-beta-lactamase superfamily TPE_1734 PF10996 Beta-Casp domain TPE_1736 PF02233 NAD(P) transhydrogenase beta subunit TPE_1738 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TPE_1738 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TPE_1739 PF12832 MFS_1 like family TPE_1741 PF12848 ABC transporter TPE_1741 PF00005 ABC transporter TPE_1746 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TPE_1746 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TPE_1747 PF01728 FtsJ-like methyltransferase TPE_1748 PF00343 Carbohydrate phosphorylase TPE_1751 PF01121 Dephospho-CoA kinase TPE_1752 PF01612 3'-5' exonuclease TPE_1752 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TPE_1752 PF01367 5'-3' exonuclease, C-terminal SAM fold TPE_1752 PF00476 DNA polymerase family A TPE_1754 PF00591 Glycosyl transferase family, a/b domain TPE_1754 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TPE_1754 PF02885 Glycosyl transferase family, helical bundle domain TPE_1755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_1755 PF02403 Seryl-tRNA synthetase N-terminal domain TPE_1760 PF09335 SNARE associated Golgi protein TPE_1762 PF00581 Rhodanese-like domain TPE_1764 PF00924 Mechanosensitive ion channel TPE_1767 PF03781 Sulfatase-modifying factor enzyme 1 TPE_1769 PF00581 Rhodanese-like domain TPE_1770 PF02627 Carboxymuconolactone decarboxylase family TPE_1773 PF01380 SIS domain TPE_1774 PF00654 Voltage gated chloride channel TPE_1778 PF02272 DHHA1 domain TPE_1778 PF01368 DHH family TPE_1778 PF17768 RecJ OB domain TPE_1778 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TPE_1779 PF00206 Lyase TPE_1779 PF10397 Adenylosuccinate lyase C-terminus TPE_1780 PF01807 CHC2 zinc finger TPE_1780 PF08275 DNA primase catalytic core, N-terminal domain TPE_1781 PF00140 Sigma-70 factor, region 1.2 TPE_1781 PF04542 Sigma-70 region 2 TPE_1781 PF04539 Sigma-70 region 3 TPE_1781 PF04545 Sigma-70, region 4 TPE_1781 PF03979 Sigma-70 factor, region 1.1 TPE_1788 PF03717 Penicillin-binding Protein dimerisation domain TPE_1788 PF00905 Penicillin binding protein transpeptidase domain TPE_1789 PF01098 Cell cycle protein TPE_1793 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_1793 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_1793 PF16886 ATPsynthase alpha/beta subunit N-term extension TPE_1794 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1794 PF00672 HAMP domain TPE_1794 PF02743 Cache domain TPE_1797 PF01813 ATP synthase subunit D TPE_1798 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_1798 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_1799 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_1799 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_1799 PF16886 ATPsynthase alpha/beta subunit N-term extension TPE_1800 PF00156 Phosphoribosyl transferase domain TPE_1803 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TPE_1803 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TPE_1804 PF01177 Asp/Glu/Hydantoin racemase TPE_1806 PF00005 ABC transporter TPE_1807 PF00795 Carbon-nitrogen hydrolase TPE_1811 PF01709 Transcriptional regulator TPE_1813 PF02142 MGS-like domain TPE_1813 PF01808 AICARFT/IMPCHase bienzyme TPE_1814 PF09820 Predicted AAA-ATPase TPE_1814 PF08011 PD-(D/E)XK nuclease superfamily TPE_1815 PF02127 Aminopeptidase I zinc metalloprotease (M18) TPE_1820 PF07977 FabA-like domain TPE_1822 PF01235 Sodium:alanine symporter family TPE_1827 PF02417 Chromate transporter TPE_1829 PF02562 PhoH-like protein TPE_1830 PF01966 HD domain TPE_1830 PF07697 7TM-HD extracellular TPE_1830 PF07698 7TM receptor with intracellular HD hydrolase TPE_1831 PF02130 Uncharacterized protein family UPF0054 TPE_1832 PF03471 Transporter associated domain TPE_1832 PF00571 CBS domain TPE_1833 PF00691 OmpA family TPE_1834 PF08207 Elongation factor P (EF-P) KOW-like domain TPE_1834 PF09285 Elongation factor P, C-terminal TPE_1834 PF01132 Elongation factor P (EF-P) OB domain TPE_1841 PF01571 Aminomethyltransferase folate-binding domain TPE_1841 PF08669 Glycine cleavage T-protein C-terminal barrel domain TPE_1845 PF01597 Glycine cleavage H-protein TPE_1846 PF02347 Glycine cleavage system P-protein TPE_1847 PF02347 Glycine cleavage system P-protein TPE_1849 PF02609 Exonuclease VII small subunit TPE_1850 PF08676 MutL C terminal dimerisation domain TPE_1850 PF01119 DNA mismatch repair protein, C-terminal domain TPE_1851 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TPE_1856 PF01668 SmpB protein TPE_1857 PF10502 Signal peptidase, peptidase S26 TPE_1858 PF04055 Radical SAM superfamily TPE_1860 PF00301 Rubredoxin TPE_1862 PF02277 Phosphoribosyltransferase TPE_1864 PF13277 YmdB-like protein TPE_1866 PF00348 Polyprenyl synthetase TPE_1869 PF00005 ABC transporter TPE_1876 PF01235 Sodium:alanine symporter family TPE_1878 PF07687 Peptidase dimerisation domain TPE_1878 PF01546 Peptidase family M20/M25/M40 TPE_1879 PF10672 S-adenosylmethionine-dependent methyltransferase TPE_1879 PF17785 PUA-like domain TPE_1880 PF01165 Ribosomal protein S21 TPE_1881 PF00533 BRCA1 C Terminus (BRCT) domain TPE_1881 PF03120 NAD-dependent DNA ligase OB-fold domain TPE_1881 PF01653 NAD-dependent DNA ligase adenylation domain TPE_1885 PF00155 Aminotransferase class I and II TPE_1886 PF04060 Putative Fe-S cluster TPE_1887 PF07650 KH domain TPE_1887 PF01926 50S ribosome-binding GTPase TPE_1888 PF16921 Tex protein YqgF-like domain TPE_1888 PF17674 HHH domain TPE_1888 PF00575 S1 RNA binding domain TPE_1888 PF09371 Tex-like protein N-terminal domain TPE_1889 PF05343 M42 glutamyl aminopeptidase TPE_1890 PF00390 Malic enzyme, N-terminal domain TPE_1890 PF03949 Malic enzyme, NAD binding domain TPE_1893 PF04298 Putative neutral zinc metallopeptidase TPE_1894 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF TPE_1894 PF01189 16S rRNA methyltransferase RsmB/F TPE_1894 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TPE_1895 PF00849 RNA pseudouridylate synthase TPE_1896 PF10672 S-adenosylmethionine-dependent methyltransferase TPE_1897 PF02629 CoA binding domain TPE_1897 PF06971 Putative DNA-binding protein N-terminus TPE_1898 PF00871 Acetokinase family TPE_1901 PF04055 Radical SAM superfamily TPE_1902 PF00309 Sigma-54 factor, Activator interacting domain (AID) TPE_1902 PF04963 Sigma-54 factor, core binding domain TPE_1902 PF04552 Sigma-54, DNA binding domain TPE_1906 PF13180 PDZ domain TPE_1906 PF17820 PDZ domain TPE_1907 PF02542 YgbB family TPE_1908 PF02542 YgbB family TPE_1908 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TPE_1909 PF02559 CarD-like/TRCF domain TPE_1912 PF00005 ABC transporter TPE_1912 PF12704 MacB-like periplasmic core domain TPE_1912 PF02687 FtsX-like permease family TPE_1914 PF12704 MacB-like periplasmic core domain TPE_1914 PF00005 ABC transporter TPE_1914 PF02687 FtsX-like permease family TPE_1916 PF01300 Telomere recombination TPE_1920 PF00563 EAL domain TPE_1920 PF03707 Bacterial signalling protein N terminal repeat TPE_1920 PF00990 Diguanylate cyclase, GGDEF domain TPE_1923 PF00158 Sigma-54 interaction domain TPE_1923 PF02954 Bacterial regulatory protein, Fis family TPE_1923 PF00072 Response regulator receiver domain TPE_1924 PF00575 S1 RNA binding domain TPE_1928 PF17760 UvrA interaction domain TPE_1928 PF17755 UvrA DNA-binding domain TPE_1928 PF00005 ABC transporter TPE_1932 PF02463 RecF/RecN/SMC N terminal domain TPE_1936 PF01476 LysM domain TPE_1937 PF03553 Na+/H+ antiporter family TPE_1938 PF01053 Cys/Met metabolism PLP-dependent enzyme TPE_1942 PF01351 Ribonuclease HII TPE_1944 PF12848 ABC transporter TPE_1944 PF00005 ABC transporter TPE_1945 PF00232 Glycosyl hydrolase family 1 TPE_1946 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TPE_1947 PF08011 PD-(D/E)XK nuclease superfamily TPE_1947 PF09820 Predicted AAA-ATPase TPE_1949 PF00773 RNB domain TPE_1950 PF00082 Subtilase family TPE_1950 PF05922 Peptidase inhibitor I9 TPE_1954 PF01263 Aldose 1-epimerase TPE_1956 PF03193 RsgA GTPase TPE_1957 PF01177 Asp/Glu/Hydantoin racemase TPE_1959 PF01921 tRNA synthetases class I (K) TPE_1960 PF00155 Aminotransferase class I and II TPE_1962 PF17864 RuvB AAA lid domain TPE_1962 PF05491 RuvB C-terminal winged helix domain TPE_1962 PF05496 Holliday junction DNA helicase RuvB P-loop domain TPE_1963 PF00465 Iron-containing alcohol dehydrogenase TPE_1965 PF07724 AAA domain (Cdc48 subfamily) TPE_1965 PF10431 C-terminal, D2-small domain, of ClpB protein TPE_1965 PF02861 Clp amino terminal domain, pathogenicity island component TPE_1965 PF00004 ATPase family associated with various cellular activities (AAA) TPE_1965 PF17871 AAA lid domain TPE_1966 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain TPE_1967 PF02151 UvrB/uvrC motif TPE_1969 PF00005 ABC transporter TPE_1970 PF02687 FtsX-like permease family TPE_1970 PF12704 MacB-like periplasmic core domain TPE_1972 PF02881 SRP54-type protein, helical bundle domain TPE_1972 PF00448 SRP54-type protein, GTPase domain TPE_1975 PF00472 RF-1 domain TPE_1975 PF03462 PCRF domain TPE_1979 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_1979 PF00672 HAMP domain TPE_1979 PF02743 Cache domain TPE_1980 PF08534 Redoxin TPE_1981 PF00580 UvrD/REP helicase N-terminal domain TPE_1981 PF13361 UvrD-like helicase C-terminal domain TPE_1984 PF00009 Elongation factor Tu GTP binding domain TPE_1984 PF03144 Elongation factor Tu domain 2 TPE_1984 PF14492 Elongation Factor G, domain II TPE_1984 PF00679 Elongation factor G C-terminus TPE_1984 PF03764 Elongation factor G, domain IV TPE_1985 PF13537 Glutamine amidotransferase domain TPE_1985 PF00156 Phosphoribosyl transferase domain TPE_1987 PF13726 Na+-H+ antiporter family TPE_1987 PF03553 Na+/H+ antiporter family TPE_1988 PF13726 Na+-H+ antiporter family TPE_1988 PF03553 Na+/H+ antiporter family TPE_1991 PF01264 Chorismate synthase TPE_1992 PF17932 Tetracyclin repressor-like, C-terminal domain TPE_1992 PF00440 Bacterial regulatory proteins, tetR family TPE_1993 PF00664 ABC transporter transmembrane region TPE_1993 PF00005 ABC transporter TPE_1994 PF00005 ABC transporter TPE_1997 PF16326 ABC transporter C-terminal domain TPE_1997 PF12848 ABC transporter TPE_1997 PF00005 ABC transporter TPE_1998 PF08239 Bacterial SH3 domain TPE_2002 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_2002 PF00005 ABC transporter TPE_2003 PF00005 ABC transporter TPE_2003 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_2004 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2004 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_2005 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2007 PF01523 Putative modulator of DNA gyrase TPE_2010 PF00375 Sodium:dicarboxylate symporter family TPE_2012 PF01973 Protein of unknown function DUF115 TPE_2013 PF00684 DnaJ central domain TPE_2013 PF01556 DnaJ C terminal domain TPE_2013 PF00226 DnaJ domain TPE_2015 PF00012 Hsp70 protein TPE_2016 PF01025 GrpE TPE_2017 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TPE_2018 PF02769 AIR synthase related protein, C-terminal domain TPE_2018 PF00586 AIR synthase related protein, N-terminal domain TPE_2019 PF01488 Shikimate / quinate 5-dehydrogenase TPE_2019 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TPE_2019 PF08501 Shikimate dehydrogenase substrate binding domain TPE_2020 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TPE_2022 PF00456 Transketolase, thiamine diphosphate binding domain TPE_2022 PF02779 Transketolase, pyrimidine binding domain TPE_2023 PF08279 HTH domain TPE_2023 PF03099 Biotin/lipoate A/B protein ligase family TPE_2023 PF02237 Biotin protein ligase C terminal domain TPE_2024 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TPE_2025 PF01039 Carboxyl transferase domain TPE_2026 PF02785 Biotin carboxylase C-terminal domain TPE_2026 PF00289 Biotin carboxylase, N-terminal domain TPE_2026 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TPE_2027 PF00364 Biotin-requiring enzyme TPE_2028 PF12241 Trans-2-enoyl-CoA reductase catalytic region TPE_2028 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase TPE_2028 PF07055 Enoyl reductase FAD binding domain TPE_2029 PF00109 Beta-ketoacyl synthase, N-terminal domain TPE_2029 PF02801 Beta-ketoacyl synthase, C-terminal domain TPE_2031 PF00698 Acyl transferase domain TPE_2032 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TPE_2032 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TPE_2034 PF00152 tRNA synthetases class II (D, K and N) TPE_2034 PF02938 GAD domain TPE_2034 PF01336 OB-fold nucleic acid binding domain TPE_2037 PF03062 MBOAT, membrane-bound O-acyltransferase family TPE_2039 PF01145 SPFH domain / Band 7 family TPE_2040 PF01145 SPFH domain / Band 7 family TPE_2041 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase TPE_2042 PF08218 Citrate lyase ligase C-terminal domain TPE_2043 PF05681 Fumarate hydratase (Fumerase) TPE_2043 PF05683 Fumarase C-terminus TPE_2044 PF05681 Fumarate hydratase (Fumerase) TPE_2046 PF00700 Bacterial flagellin C-terminal helical region TPE_2046 PF00669 Bacterial flagellin N-terminal helical region TPE_2047 PF01584 CheW-like domain TPE_2049 PF01513 ATP-NAD kinase TPE_2050 PF00664 ABC transporter transmembrane region TPE_2050 PF00005 ABC transporter TPE_2051 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TPE_2051 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TPE_2052 PF00221 Aromatic amino acid lyase TPE_2054 PF00005 ABC transporter TPE_2057 PF03477 ATP cone domain TPE_2086 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_2086 PF04073 Aminoacyl-tRNA editing domain TPE_2086 PF03129 Anticodon binding domain TPE_2088 PF00005 ABC transporter TPE_2088 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_2089 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_2089 PF00005 ABC transporter TPE_2090 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2090 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_2091 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2092 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_2093 PF00892 EamA-like transporter family TPE_2097 PF08323 Starch synthase catalytic domain TPE_2097 PF00534 Glycosyl transferases group 1 TPE_2098 PF04260 Protein of unknown function (DUF436) TPE_2101 PF00933 Glycosyl hydrolase family 3 N terminal domain TPE_2104 PF18269 T3SS EscN ATPase C-terminal domain TPE_2104 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_2104 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_2105 PF02108 Flagellar assembly protein FliH TPE_2106 PF14841 FliG middle domain TPE_2106 PF01706 FliG C-terminal domain TPE_2106 PF14842 FliG N-terminal domain TPE_2107 PF01514 Secretory protein of YscJ/FliF family TPE_2107 PF08345 Flagellar M-ring protein C-terminal TPE_2108 PF02049 Flagellar hook-basal body complex protein FliE TPE_2109 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_2109 PF00460 Flagella basal body rod protein TPE_2110 PF00460 Flagella basal body rod protein TPE_2111 PF07724 AAA domain (Cdc48 subfamily) TPE_2111 PF00004 ATPase family associated with various cellular activities (AAA) TPE_2112 PF00227 Proteasome subunit TPE_2113 PF00589 Phage integrase family TPE_2113 PF02899 Phage integrase, N-terminal SAM-like domain TPE_2114 PF01396 Topoisomerase DNA binding C4 zinc finger TPE_2114 PF01131 DNA topoisomerase TPE_2114 PF01751 Toprim domain TPE_2115 PF17782 DprA winged helix domain TPE_2115 PF02481 DNA recombination-mediator protein A TPE_2117 PF02899 Phage integrase, N-terminal SAM-like domain TPE_2117 PF00589 Phage integrase family TPE_2118 PF00091 Tubulin/FtsZ family, GTPase domain TPE_2118 PF12327 FtsZ family, C-terminal domain TPE_2119 PF02491 SHS2 domain inserted in FTSA TPE_2121 PF01098 Cell cycle protein TPE_2122 PF01225 Mur ligase family, catalytic domain TPE_2122 PF08245 Mur ligase middle domain TPE_2122 PF02875 Mur ligase family, glutamate ligase domain TPE_2124 PF01795 MraW methylase family TPE_2125 PF02381 MraZ protein, putative antitoxin-like TPE_2127 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TPE_2127 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TPE_2129 PF10282 Lactonase, 7-bladed beta-propeller TPE_2131 PF00271 Helicase conserved C-terminal domain TPE_2131 PF00270 DEAD/DEAH box helicase TPE_2132 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_2133 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_2134 PF09338 Glycine/sarcosine/betaine reductase component B subunits TPE_2135 PF01205 Uncharacterized protein family UPF0029 TPE_2135 PF09186 Domain of unknown function (DUF1949) TPE_2139 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_2140 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2141 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_2141 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2142 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_2142 PF00005 ABC transporter TPE_2144 PF08241 Methyltransferase domain TPE_2147 PF14492 Elongation Factor G, domain II TPE_2147 PF00679 Elongation factor G C-terminus TPE_2147 PF06421 GTP-binding protein LepA C-terminus TPE_2147 PF03144 Elongation factor Tu domain 2 TPE_2147 PF00009 Elongation factor Tu GTP binding domain TPE_2148 PF00156 Phosphoribosyl transferase domain TPE_2149 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_2149 PF02743 Cache domain TPE_2149 PF00672 HAMP domain TPE_2150 PF02163 Peptidase family M50 TPE_2150 PF17820 PDZ domain TPE_2151 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TPE_2151 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TPE_2151 PF13288 DXP reductoisomerase C-terminal domain TPE_2153 PF01255 Putative undecaprenyl diphosphate synthase TPE_2154 PF01765 Ribosome recycling factor TPE_2155 PF00889 Elongation factor TS TPE_2156 PF00318 Ribosomal protein S2 TPE_2168 PF03515 Colicin-like bacteriocin tRNase domain TPE_2168 PF06958 S-type Pyocin TPE_2168 PF11429 Colicin D TPE_2173 PF14220 Domain of unknown function (DUF4329) TPE_2173 PF05593 RHS Repeat TPE_2173 PF03527 RHS protein TPE_2184 PF02743 Cache domain TPE_2184 PF00672 HAMP domain TPE_2184 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_2187 PF01523 Putative modulator of DNA gyrase TPE_2188 PF01523 Putative modulator of DNA gyrase TPE_2189 PF06857 Malonate decarboxylase delta subunit (MdcD) TPE_2190 PF03328 HpcH/HpaI aldolase/citrate lyase family TPE_2191 PF04223 Citrate lyase, alpha subunit (CitF) TPE_2192 PF09107 Elongation factor SelB, winged helix TPE_2192 PF09105 Elongation factor SelB, winged helix TPE_2192 PF00009 Elongation factor Tu GTP binding domain TPE_2192 PF03144 Elongation factor Tu domain 2 TPE_2192 PF09106 Elongation factor SelB, winged helix TPE_2194 PF01176 Translation initiation factor 1A / IF-1 TPE_2195 PF00226 DnaJ domain TPE_2195 PF01556 DnaJ C terminal domain TPE_2195 PF00684 DnaJ central domain TPE_2196 PF00696 Amino acid kinase family TPE_2197 PF01648 4'-phosphopantetheinyl transferase superfamily TPE_2199 PF02457 DisA bacterial checkpoint controller nucleotide-binding TPE_2200 PF02780 Transketolase, C-terminal domain TPE_2200 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TPE_2200 PF02779 Transketolase, pyrimidine binding domain TPE_2201 PF17820 PDZ domain TPE_2201 PF13180 PDZ domain TPE_2202 PF02545 Maf-like protein TPE_2205 PF00700 Bacterial flagellin C-terminal helical region TPE_2205 PF00669 Bacterial flagellin N-terminal helical region TPE_2206 PF00669 Bacterial flagellin N-terminal helical region TPE_2206 PF00700 Bacterial flagellin C-terminal helical region TPE_2207 PF03646 FlaG protein TPE_2208 PF07195 Flagellar hook-associated protein 2 C-terminus TPE_2208 PF02465 Flagellar hook-associated protein 2 N-terminus TPE_2211 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TPE_2213 PF00072 Response regulator receiver domain TPE_2214 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPE_2214 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPE_2214 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPE_2214 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPE_2215 PF00929 Exonuclease TPE_2216 PF00158 Sigma-54 interaction domain TPE_2216 PF00072 Response regulator receiver domain TPE_2216 PF02954 Bacterial regulatory protein, Fis family TPE_2218 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TPE_2227 PF13186 Iron-sulfur cluster-binding domain TPE_2230 PF01625 Peptide methionine sulfoxide reductase TPE_2230 PF01641 SelR domain TPE_2231 PF00905 Penicillin binding protein transpeptidase domain TPE_2231 PF00912 Transglycosylase TPE_2232 PF02623 FliW protein TPE_2233 PF02599 Global regulator protein family TPE_2234 PF05857 TraX protein TPE_2235 PF00579 tRNA synthetases class I (W and Y) TPE_2237 PF14537 Cytochrome c3 TPE_2237 PF00890 FAD binding domain TPE_2244 PF13335 Magnesium chelatase, subunit ChlI C-terminal TPE_2244 PF01078 Magnesium chelatase, subunit ChlI TPE_2246 PF03806 AbgT putative transporter family TPE_2248 PF04551 GcpE protein TPE_2252 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_2253 PF01266 FAD dependent oxidoreductase TPE_2254 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_2254 PF00460 Flagella basal body rod protein TPE_2255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TPE_2255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TPE_2258 PF01029 NusB family TPE_2259 PF13145 PPIC-type PPIASE domain TPE_2260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPE_2260 PF01411 tRNA synthetases class II (A) TPE_2266 PF00574 Clp protease TPE_2268 PF01195 Peptidyl-tRNA hydrolase TPE_2270 PF00224 Pyruvate kinase, barrel domain TPE_2270 PF00391 PEP-utilising enzyme, mobile domain TPE_2270 PF02887 Pyruvate kinase, alpha/beta domain TPE_2272 PF00326 Prolyl oligopeptidase family TPE_2275 PF00551 Formyl transferase TPE_2285 PF01043 SecA preprotein cross-linking domain TPE_2285 PF07516 SecA Wing and Scaffold domain TPE_2285 PF07517 SecA DEAD-like domain TPE_2285 PF02810 SEC-C motif TPE_2286 PF09820 Predicted AAA-ATPase TPE_2286 PF08011 PD-(D/E)XK nuclease superfamily TPE_2288 PF00990 Diguanylate cyclase, GGDEF domain TPE_2293 PF08668 HDOD domain TPE_2295 PF00027 Cyclic nucleotide-binding domain TPE_2295 PF13545 Crp-like helix-turn-helix domain TPE_2296 PF01252 Signal peptidase (SPase) II TPE_2297 PF02424 ApbE family TPE_2298 PF05958 tRNA (Uracil-5-)-methyltransferase TPE_2307 PF03781 Sulfatase-modifying factor enzyme 1 TPE_2308 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TPE_2308 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_2309 PF02906 Iron only hydrogenase large subunit, C-terminal domain TPE_2309 PF02256 Iron hydrogenase small subunit TPE_2309 PF00037 4Fe-4S binding domain TPE_2309 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPE_2310 PF04055 Radical SAM superfamily TPE_2310 PF01938 TRAM domain TPE_2310 PF00919 Uncharacterized protein family UPF0004 TPE_2311 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TPE_2311 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TPE_2312 PF01891 Cobalt uptake substrate-specific transmembrane region TPE_2314 PF01008 Initiation factor 2 subunit family TPE_2318 PF00118 TCP-1/cpn60 chaperonin family TPE_2320 PF07009 NusG domain II TPE_2321 PF12704 MacB-like periplasmic core domain TPE_2321 PF02687 FtsX-like permease family TPE_2321 PF00005 ABC transporter TPE_2323 PF07859 alpha/beta hydrolase fold TPE_2324 PF00664 ABC transporter transmembrane region TPE_2324 PF00005 ABC transporter TPE_2328 PF08011 PD-(D/E)XK nuclease superfamily TPE_2328 PF09820 Predicted AAA-ATPase TPE_2330 PF00005 ABC transporter TPE_2333 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TPE_2334 PF18073 Rubredoxin metal binding domain TPE_2334 PF06745 KaiC TPE_2339 PF13361 UvrD-like helicase C-terminal domain TPE_2339 PF00580 UvrD/REP helicase N-terminal domain TPE_2340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_2340 PF03129 Anticodon binding domain TPE_2340 PF02824 TGS domain TPE_2340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPE_2344 PF00005 ABC transporter TPE_2345 PF02355 Protein export membrane protein TPE_2346 PF02355 Protein export membrane protein TPE_2347 PF02699 Preprotein translocase subunit TPE_2348 PF01783 Ribosomal L32p protein family TPE_2349 PF00550 Phosphopantetheine attachment site TPE_2350 PF00035 Double-stranded RNA binding motif TPE_2350 PF14622 Ribonuclease-III-like TPE_2351 PF17764 3′ DNA-binding domain (3′BD) TPE_2351 PF18074 Primosomal protein N C-terminal domain TPE_2351 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TPE_2351 PF00270 DEAD/DEAH box helicase TPE_2351 PF00271 Helicase conserved C-terminal domain TPE_2352 PF03167 Uracil DNA glycosylase superfamily TPE_2354 PF00579 tRNA synthetases class I (W and Y) TPE_2355 PF05191 Adenylate kinase, active site lid TPE_2359 PF01551 Peptidase family M23 TPE_2359 PF04225 Opacity-associated protein A LysM-like domain TPE_2361 PF02743 Cache domain TPE_2361 PF00672 HAMP domain TPE_2361 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_2363 PF12733 Cadherin-like beta sandwich domain TPE_2363 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TPE_2366 PF17757 UvrB interaction domain TPE_2366 PF12344 Ultra-violet resistance protein B TPE_2366 PF02151 UvrB/uvrC motif TPE_2366 PF04851 Type III restriction enzyme, res subunit TPE_2366 PF00271 Helicase conserved C-terminal domain TPE_2367 PF01197 Ribosomal protein L31 TPE_2370 PF00206 Lyase TPE_2370 PF10415 Fumarase C C-terminus TPE_2371 PF08011 PD-(D/E)XK nuclease superfamily TPE_2371 PF09820 Predicted AAA-ATPase TPE_2372 PF17757 UvrB interaction domain TPE_2372 PF00270 DEAD/DEAH box helicase TPE_2372 PF02559 CarD-like/TRCF domain TPE_2372 PF03461 TRCF domain TPE_2372 PF00271 Helicase conserved C-terminal domain TPE_2375 PF01370 NAD dependent epimerase/dehydratase family TPE_2376 PF00403 Heavy-metal-associated domain TPE_2377 PF01022 Bacterial regulatory protein, arsR family TPE_2379 PF07238 PilZ domain TPE_2381 PF00005 ABC transporter TPE_2382 PF00588 SpoU rRNA Methylase family TPE_2383 PF11849 Domain of unknown function (DUF3369) TPE_2384 PF03841 L-seryl-tRNA selenium transferase TPE_2384 PF12390 Selenocysteine synthase N terminal TPE_2385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TPE_2385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TPE_2387 PF04002 RadC-like JAB domain TPE_2387 PF12826 Helix-hairpin-helix motif TPE_2389 PF00578 AhpC/TSA family TPE_2393 PF12801 4Fe-4S binding domain TPE_2393 PF04205 FMN-binding domain TPE_2394 PF00005 ABC transporter TPE_2394 PF00664 ABC transporter transmembrane region TPE_2401 PF04101 Glycosyltransferase family 28 C-terminal domain TPE_2401 PF03033 Glycosyltransferase family 28 N-terminal domain TPE_2403 PF00440 Bacterial regulatory proteins, tetR family TPE_2403 PF08361 MAATS-type transcriptional repressor, C-terminal region TPE_2404 PF00664 ABC transporter transmembrane region TPE_2404 PF00005 ABC transporter TPE_2404 PF08021 Siderophore-interacting FAD-binding domain TPE_2404 PF04954 Siderophore-interacting protein TPE_2405 PF00005 ABC transporter TPE_2405 PF00664 ABC transporter transmembrane region TPE_2430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TPE_2441 PF01479 S4 domain TPE_2441 PF00849 RNA pseudouridylate synthase TPE_2444 PF10531 SLBB domain TPE_2444 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPE_2444 PF13375 RnfC Barrel sandwich hybrid domain TPE_2444 PF13237 4Fe-4S dicluster domain TPE_2450 PF02245 Methylpurine-DNA glycosylase (MPG) TPE_2453 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2454 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2455 PF17912 MalK OB fold domain TPE_2455 PF03459 TOBE domain TPE_2455 PF00005 ABC transporter TPE_2456 PF02446 4-alpha-glucanotransferase TPE_2457 PF00005 ABC transporter TPE_2458 PF00005 ABC transporter TPE_2460 PF02576 RimP N-terminal domain TPE_2460 PF17384 RimP C-terminal SH3 domain TPE_2461 PF08529 NusA N-terminal domain TPE_2461 PF00575 S1 RNA binding domain TPE_2461 PF13184 NusA-like KH domain TPE_2462 PF00009 Elongation factor Tu GTP binding domain TPE_2462 PF11987 Translation-initiation factor 2 TPE_2462 PF04760 Translation initiation factor IF-2, N-terminal region TPE_2463 PF02033 Ribosome-binding factor A TPE_2464 PF01509 TruB family pseudouridylate synthase (N terminal domain) TPE_2467 PF02492 CobW/HypB/UreG, nucleotide-binding domain TPE_2468 PF00164 Ribosomal protein S12/S23 TPE_2469 PF00177 Ribosomal protein S7p/S5e TPE_2470 PF00877 NlpC/P60 family TPE_2471 PF00501 AMP-binding enzyme TPE_2471 PF13193 AMP-binding enzyme C-terminal domain TPE_2480 PF00005 ABC transporter TPE_2481 PF12683 Protein of unknown function (DUF3798) TPE_2486 PF01784 NIF3 (NGG1p interacting factor 3) TPE_2487 PF02844 Phosphoribosylglycinamide synthetase, N domain TPE_2487 PF02843 Phosphoribosylglycinamide synthetase, C domain TPE_2487 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TPE_2488 PF02637 GatB domain TPE_2488 PF02934 GatB/GatE catalytic domain TPE_2489 PF00106 short chain dehydrogenase TPE_2490 PF02441 Flavoprotein TPE_2490 PF04127 DNA / pantothenate metabolism flavoprotein TPE_2495 PF04011 LemA family TPE_2497 PF01259 SAICAR synthetase TPE_2498 PF00731 AIR carboxylase TPE_2499 PF01636 Phosphotransferase enzyme family TPE_2501 PF00005 ABC transporter TPE_2502 PF00005 ABC transporter TPE_2506 PF00691 OmpA family TPE_2507 PF01476 LysM domain TPE_2507 PF00877 NlpC/P60 family TPE_2507 PF08239 Bacterial SH3 domain TPE_2510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_2510 PF00005 ABC transporter TPE_2511 PF00005 ABC transporter TPE_2511 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_2512 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2512 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_2513 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2515 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TPE_2515 PF00326 Prolyl oligopeptidase family TPE_2517 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_2519 PF01467 Cytidylyltransferase-like TPE_2523 PF01743 Poly A polymerase head domain TPE_2523 PF12627 Probable RNA and SrmB- binding site of polymerase A TPE_2523 PF12626 Polymerase A arginine-rich C-terminus TPE_2528 PF01966 HD domain TPE_2532 PF02386 Cation transport protein TPE_2533 PF02254 TrkA-N domain TPE_2533 PF02080 TrkA-C domain TPE_2538 PF01168 Alanine racemase, N-terminal domain TPE_2538 PF00842 Alanine racemase, C-terminal domain TPE_2539 PF02401 LytB protein TPE_2540 PF03330 Lytic transglycolase TPE_2541 PF05198 Translation initiation factor IF-3, N-terminal domain TPE_2541 PF00707 Translation initiation factor IF-3, C-terminal domain TPE_2542 PF01632 Ribosomal protein L35 TPE_2543 PF00453 Ribosomal protein L20 TPE_2545 PF05164 Cell division protein ZapA TPE_2546 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TPE_2548 PF00005 ABC transporter TPE_2549 PF00005 ABC transporter TPE_2550 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2551 PF00528 Binding-protein-dependent transport system inner membrane component TPE_2552 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_2554 PF13673 Acetyltransferase (GNAT) domain TPE_2557 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_2557 PF00672 HAMP domain TPE_2557 PF02743 Cache domain TPE_2558 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_2558 PF00672 HAMP domain TPE_2558 PF02743 Cache domain TPE_2560 PF02719 Polysaccharide biosynthesis protein TPE_2563 PF01245 Ribosomal protein L19 TPE_2564 PF01746 tRNA (Guanine-1)-methyltransferase TPE_2565 PF01782 RimM N-terminal domain TPE_2567 PF00886 Ribosomal protein S16 TPE_2568 PF05524 PEP-utilising enzyme, N-terminal TPE_2568 PF00391 PEP-utilising enzyme, mobile domain TPE_2568 PF02896 PEP-utilising enzyme, TIM barrel domain TPE_2570 PF01926 50S ribosome-binding GTPase TPE_2570 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TPE_2572 PF17922 Tetracyclin repressor-like, C-terminal domain TPE_2572 PF00440 Bacterial regulatory proteins, tetR family TPE_2574 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPE_2574 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPE_2574 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPE_2574 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPE_2575 PF02308 MgtC family TPE_2578 PF00005 ABC transporter TPE_2579 PF06832 Penicillin-Binding Protein C-terminus Family TPE_2579 PF00905 Penicillin binding protein transpeptidase domain TPE_2579 PF00912 Transglycosylase TPE_2580 PF00004 ATPase family associated with various cellular activities (AAA) TPE_2580 PF05362 Lon protease (S16) C-terminal proteolytic domain TPE_2580 PF02190 ATP-dependent protease La (LON) substrate-binding domain TPE_2581 PF01026 TatD related DNase TPE_2583 PF00586 AIR synthase related protein, N-terminal domain TPE_2583 PF02769 AIR synthase related protein, C-terminal domain TPE_2584 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain TPE_2584 PF00207 Alpha-2-macroglobulin family TPE_2584 PF17962 Bacterial macroglobulin domain 6 TPE_2584 PF01835 MG2 domain TPE_2584 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain TPE_2584 PF11974 Bacterial alpha-2-macroglobulin MG3 domain TPE_2584 PF07703 Alpha-2-macroglobulin bait region domain TPE_2586 PF02674 Colicin V production protein TPE_2587 PF09115 DNA polymerase III, delta subunit, C terminal TPE_2588 PF13188 PAS domain TPE_2588 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_2588 PF00512 His Kinase A (phospho-acceptor) domain TPE_2588 PF13426 PAS domain TPE_2588 PF00989 PAS fold TPE_2589 PF00578 AhpC/TSA family TPE_2589 PF10417 C-terminal domain of 1-Cys peroxiredoxin TPE_2590 PF03372 Endonuclease/Exonuclease/phosphatase family TPE_2591 PF00557 Metallopeptidase family M24 TPE_2592 PF00226 DnaJ domain TPE_2592 PF00684 DnaJ central domain TPE_2592 PF01556 DnaJ C terminal domain TPE_2595 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_2595 PF00672 HAMP domain TPE_2597 PF01973 Protein of unknown function DUF115 TPE_2605 PF02653 Branched-chain amino acid transport system / permease component TPE_2606 PF00830 Ribosomal L28 family TPE_2608 PF03193 RsgA GTPase TPE_2611 PF00005 ABC transporter TPE_2612 PF01032 FecCD transport family TPE_2614 PF00005 ABC transporter TPE_2614 PF00664 ABC transporter transmembrane region TPE_2617 PF00664 ABC transporter transmembrane region TPE_2617 PF00005 ABC transporter TPE_2618 PF00664 ABC transporter transmembrane region TPE_2618 PF00005 ABC transporter TPE_2620 PF01196 Ribosomal protein L17 TPE_2621 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TPE_2621 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TPE_2621 PF01000 RNA polymerase Rpb3/RpoA insert domain TPE_2622 PF00411 Ribosomal protein S11 TPE_2623 PF00416 Ribosomal protein S13/S18 TPE_2625 PF00344 SecY translocase TPE_2626 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TPE_2627 PF00327 Ribosomal protein L30p/L7e TPE_2628 PF00333 Ribosomal protein S5, N-terminal domain TPE_2628 PF03719 Ribosomal protein S5, C-terminal domain TPE_2629 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TPE_2630 PF00347 Ribosomal protein L6 TPE_2631 PF00410 Ribosomal protein S8 TPE_2632 PF00281 Ribosomal protein L5 TPE_2632 PF00673 ribosomal L5P family C-terminus TPE_2633 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TPE_2633 PF00467 KOW motif TPE_2634 PF00238 Ribosomal protein L14p/L23e TPE_2635 PF00366 Ribosomal protein S17 TPE_2636 PF00831 Ribosomal L29 protein TPE_2637 PF00252 Ribosomal protein L16p/L10e TPE_2638 PF00189 Ribosomal protein S3, C-terminal domain TPE_2638 PF07650 KH domain TPE_2640 PF03947 Ribosomal Proteins L2, C-terminal domain TPE_2640 PF00181 Ribosomal Proteins L2, RNA binding domain TPE_2641 PF00276 Ribosomal protein L23 TPE_2642 PF00573 Ribosomal protein L4/L1 family TPE_2643 PF00297 Ribosomal protein L3 TPE_2644 PF00338 Ribosomal protein S10p/S20e TPE_2645 PF03144 Elongation factor Tu domain 2 TPE_2645 PF00009 Elongation factor Tu GTP binding domain TPE_2645 PF03143 Elongation factor Tu C-terminal domain TPE_2647 PF17863 AAA lid domain TPE_2647 PF07726 ATPase family associated with various cellular activities (AAA) TPE_2648 PF02511 Thymidylate synthase complementing protein TPE_2656 PF01434 Peptidase family M41 TPE_2656 PF17862 AAA+ lid domain TPE_2656 PF00004 ATPase family associated with various cellular activities (AAA) TPE_2659 PF00672 HAMP domain TPE_2659 PF02743 Cache domain TPE_2659 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_2662 PF07859 alpha/beta hydrolase fold TPE_2662 PF00934 PE family TPE_2667 PF13749 Putative ATP-dependent DNA helicase recG C-terminal TPE_2667 PF00270 DEAD/DEAH box helicase TPE_2667 PF17191 RecG wedge domain TPE_2673 PF00005 ABC transporter TPE_2673 PF12848 ABC transporter TPE_2679 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_2679 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPE_2682 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TPE_2682 PF12733 Cadherin-like beta sandwich domain TPE_2685 PF08011 PD-(D/E)XK nuclease superfamily TPE_2685 PF09820 Predicted AAA-ATPase TPE_2688 PF13280 WYL domain TPE_2688 PF08279 HTH domain TPE_2693 PF12833 Helix-turn-helix domain TPE_2693 PF06445 GyrI-like small molecule binding domain TPE_2699 PF00890 FAD binding domain TPE_2699 PF04205 FMN-binding domain TPE_2701 PF00005 ABC transporter TPE_2702 PF01032 FecCD transport family TPE_2703 PF01032 FecCD transport family TPE_2704 PF01497 Periplasmic binding protein TPE_2708 PF01175 Urocanase Rossmann-like domain TPE_2708 PF17391 Urocanase N-terminal domain TPE_2708 PF17392 Urocanase C-terminal domain TPE_2713 PF08011 PD-(D/E)XK nuclease superfamily TPE_2713 PF09820 Predicted AAA-ATPase TPE_2714 PF13654 AAA domain TPE_2714 PF05362 Lon protease (S16) C-terminal proteolytic domain TPE_2717 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_2718 PF05175 Methyltransferase small domain TPE_2720 PF00365 Phosphofructokinase TPE_2721 PF02132 RecR protein TPE_2721 PF13662 Toprim domain TPE_2722 PF02575 YbaB/EbfC DNA-binding family TPE_2723 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TPE_2723 PF02769 AIR synthase related protein, C-terminal domain TPE_2723 PF00586 AIR synthase related protein, N-terminal domain TPE_2727 PF00121 Triosephosphate isomerase TPE_2728 PF16363 GDP-mannose 4,6 dehydratase TPE_2729 PF02773 S-adenosylmethionine synthetase, C-terminal domain TPE_2729 PF02772 S-adenosylmethionine synthetase, central domain TPE_2729 PF00438 S-adenosylmethionine synthetase, N-terminal domain TPE_2730 PF08011 PD-(D/E)XK nuclease superfamily TPE_2730 PF09820 Predicted AAA-ATPase TPE_2731 PF01554 MatE TPE_2732 PF00551 Formyl transferase TPE_2732 PF02911 Formyl transferase, C-terminal domain TPE_2733 PF01327 Polypeptide deformylase TPE_2734 PF00300 Histidine phosphatase superfamily (branch 1) TPE_2737 PF03793 PASTA domain TPE_2739 PF03796 DnaB-like helicase C terminal domain TPE_2739 PF00772 DnaB-like helicase N terminal domain TPE_2742 PF01713 Smr domain TPE_2742 PF00488 MutS domain V TPE_2745 PF07584 Aerotolerance regulator N-terminal TPE_2745 PF00092 von Willebrand factor type A domain TPE_2746 PF00092 von Willebrand factor type A domain TPE_2748 PF01882 Protein of unknown function DUF58 TPE_2750 PF17131 Outer membrane lipoprotein-sorting protein TPE_2752 PF00440 Bacterial regulatory proteins, tetR family TPE_2754 PF00950 ABC 3 transport family TPE_2755 PF00950 ABC 3 transport family TPE_2756 PF00005 ABC transporter TPE_2757 PF01297 Zinc-uptake complex component A periplasmic TPE_2765 PF02146 Sir2 family TPE_2766 PF01381 Helix-turn-helix TPE_2768 PF03186 CobD/Cbib protein TPE_2769 PF00365 Phosphofructokinase TPE_2771 PF00204 DNA gyrase B TPE_2771 PF00986 DNA gyrase B subunit, carboxyl terminus TPE_2771 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_2771 PF01751 Toprim domain TPE_2774 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TPE_2776 PF14804 Jag N-terminus TPE_2776 PF01424 R3H domain TPE_2777 PF02096 60Kd inner membrane protein TPE_2777 PF14849 YidC periplasmic domain TPE_2778 PF01809 Putative membrane protein insertion efficiency factor TPE_2779 PF00825 Ribonuclease P TPE_2780 PF00468 Ribosomal protein L34 TPE_2782 PF01048 Phosphorylase superfamily TPE_2786 PF17158 Membrane-associated sensor, integral membrane domain TPE_2786 PF00990 Diguanylate cyclase, GGDEF domain TPE_2787 PF00563 EAL domain TPE_2787 PF00990 Diguanylate cyclase, GGDEF domain TPE_2787 PF03707 Bacterial signalling protein N terminal repeat TPE_2791 PF12706 Beta-lactamase superfamily domain TPE_2791 PF00753 Metallo-beta-lactamase superfamily TPE_2792 PF14842 FliG N-terminal domain TPE_2792 PF14841 FliG middle domain TPE_2792 PF01706 FliG C-terminal domain TPE_2793 PF00460 Flagella basal body rod protein TPE_2793 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_2794 PF10135 Rod binding protein TPE_2795 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TPE_2795 PF01565 FAD binding domain TPE_2805 PF00005 ABC transporter TPE_2806 PF09382 RQC domain TPE_2806 PF00570 HRDC domain TPE_2806 PF16124 RecQ zinc-binding TPE_2806 PF00271 Helicase conserved C-terminal domain TPE_2806 PF00270 DEAD/DEAH box helicase TPE_2808 PF01751 Toprim domain TPE_2808 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_2808 PF00986 DNA gyrase B subunit, carboxyl terminus TPE_2808 PF00204 DNA gyrase B