locus-tag class description HPJ96_00005 PF11638 DnaA N-terminal domain HPJ96_00005 PF08299 Bacterial dnaA protein helix-turn-helix HPJ96_00005 PF00308 Bacterial dnaA protein HPJ96_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HPJ96_00010 PF02767 DNA polymerase III beta subunit, central domain HPJ96_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HPJ96_00015 PF02463 RecF/RecN/SMC N terminal domain HPJ96_00020 PF05258 Dna[CI] antecedent, DciA HPJ96_00030 PF01212 Beta-eliminating lyase HPJ96_00035 PF00209 Sodium:neurotransmitter symporter family HPJ96_00040 PF00521 DNA gyrase/topoisomerase IV, subunit A HPJ96_00040 PF03989 DNA gyrase C-terminal domain, beta-propeller HPJ96_00045 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_00050 PF00005 ABC transporter HPJ96_00055 PF00128 Alpha amylase, catalytic domain HPJ96_00055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPJ96_00060 PF01869 BadF/BadG/BcrA/BcrD ATPase family HPJ96_00070 PF01555 DNA methylase HPJ96_00295 PF01225 Mur ligase family, catalytic domain HPJ96_00295 PF02875 Mur ligase family, glutamate ligase domain HPJ96_00295 PF08245 Mur ligase middle domain HPJ96_00300 PF00849 RNA pseudouridylate synthase HPJ96_00305 PF01546 Peptidase family M20/M25/M40 HPJ96_00305 PF07687 Peptidase dimerisation domain HPJ96_00310 PF00005 ABC transporter HPJ96_00330 PF02348 Cytidylyltransferase HPJ96_00340 PF13186 Iron-sulfur cluster-binding domain HPJ96_00350 PF03129 Anticodon binding domain HPJ96_00350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPJ96_00355 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPJ96_00360 PF01263 Aldose 1-epimerase HPJ96_00375 PF08220 DeoR-like helix-turn-helix domain HPJ96_00375 PF00455 DeoR C terminal sensor domain HPJ96_00385 PF00933 Glycosyl hydrolase family 3 N terminal domain HPJ96_00395 PF02837 Glycosyl hydrolases family 2, sugar binding domain HPJ96_00395 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HPJ96_00395 PF00703 Glycosyl hydrolases family 2 HPJ96_00400 PF02614 Glucuronate isomerase HPJ96_00405 PF03480 Bacterial extracellular solute-binding protein, family 7 HPJ96_00415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPJ96_00420 PF08125 Mannitol dehydrogenase C-terminal domain HPJ96_00420 PF01232 Mannitol dehydrogenase Rossmann domain HPJ96_00425 PF03786 D-mannonate dehydratase (UxuA) HPJ96_00435 PF03807 NADP oxidoreductase coenzyme F420-dependent HPJ96_00435 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPJ96_00440 PF01594 AI-2E family transporter HPJ96_00455 PF01728 FtsJ-like methyltransferase HPJ96_00470 PF03129 Anticodon binding domain HPJ96_00470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPJ96_00470 PF04073 Aminoacyl-tRNA editing domain HPJ96_00475 PF01728 FtsJ-like methyltransferase HPJ96_00475 PF18125 RlmM ferredoxin-like domain HPJ96_00485 PF00465 Iron-containing alcohol dehydrogenase HPJ96_00485 PF00171 Aldehyde dehydrogenase family HPJ96_00505 PF00919 Uncharacterized protein family UPF0004 HPJ96_00505 PF04055 Radical SAM superfamily HPJ96_00530 PF00575 S1 RNA binding domain HPJ96_00530 PF09371 Tex-like protein N-terminal domain HPJ96_00530 PF17674 HHH domain HPJ96_00530 PF16921 Tex protein YqgF-like domain HPJ96_00565 PF01554 MatE HPJ96_00570 PF05746 DALR anticodon binding domain HPJ96_00570 PF00750 tRNA synthetases class I (R) HPJ96_00570 PF03485 Arginyl tRNA synthetase N terminal domain HPJ96_00575 PF01554 MatE HPJ96_00585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_00585 PF12729 Four helix bundle sensory module for signal transduction HPJ96_00585 PF00672 HAMP domain HPJ96_00590 PF12320 Type 5 capsule protein repressor C-terminal domain HPJ96_00590 PF00149 Calcineurin-like phosphoesterase HPJ96_00595 PF13476 AAA domain HPJ96_00605 PF12848 ABC transporter HPJ96_00605 PF00005 ABC transporter HPJ96_00610 PF04073 Aminoacyl-tRNA editing domain HPJ96_00615 PF13180 PDZ domain HPJ96_00615 PF03572 Peptidase family S41 HPJ96_00620 PF04452 RNA methyltransferase HPJ96_00630 PF02954 Bacterial regulatory protein, Fis family HPJ96_00630 PF06490 Flagellar regulatory protein FleQ HPJ96_00630 PF00158 Sigma-54 interaction domain HPJ96_00635 PF00588 SpoU rRNA Methylase family HPJ96_00650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPJ96_00650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPJ96_00665 PF04542 Sigma-70 region 2 HPJ96_00665 PF04539 Sigma-70 region 3 HPJ96_00665 PF04545 Sigma-70, region 4 HPJ96_00670 PF14804 Jag N-terminus HPJ96_00670 PF01424 R3H domain HPJ96_00695 PF12002 MgsA AAA+ ATPase C terminal HPJ96_00695 PF16193 AAA C-terminal domain HPJ96_00695 PF00004 ATPase family associated with various cellular activities (AAA) HPJ96_00705 PF13505 Outer membrane protein beta-barrel domain HPJ96_00710 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HPJ96_00710 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HPJ96_00715 PF02649 Type I GTP cyclohydrolase folE2 HPJ96_00725 PF01555 DNA methylase HPJ96_00735 PF01168 Alanine racemase, N-terminal domain HPJ96_00750 PF01784 NIF3 (NGG1p interacting factor 3) HPJ96_00755 PF01252 Signal peptidase (SPase) II HPJ96_00775 PF03819 MazG nucleotide pyrophosphohydrolase domain HPJ96_00795 PF00665 Integrase core domain HPJ96_00795 PF13333 Integrase core domain HPJ96_00810 PF14815 NUDIX domain HPJ96_00810 PF00730 HhH-GPD superfamily base excision DNA repair protein HPJ96_00810 PF00633 Helix-hairpin-helix motif HPJ96_00825 PF02875 Mur ligase family, glutamate ligase domain HPJ96_00825 PF08245 Mur ligase middle domain HPJ96_00825 PF01225 Mur ligase family, catalytic domain HPJ96_00830 PF02151 UvrB/uvrC motif HPJ96_00830 PF12344 Ultra-violet resistance protein B HPJ96_00830 PF17757 UvrB interaction domain HPJ96_00830 PF00271 Helicase conserved C-terminal domain HPJ96_00830 PF04851 Type III restriction enzyme, res subunit HPJ96_00845 PF00665 Integrase core domain HPJ96_00845 PF13333 Integrase core domain HPJ96_00870 PF00665 Integrase core domain HPJ96_00870 PF13333 Integrase core domain HPJ96_00880 PF02719 Polysaccharide biosynthesis protein HPJ96_00890 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_00895 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_00900 PF13416 Bacterial extracellular solute-binding protein HPJ96_00915 PF07694 5TMR of 5TMR-LYT HPJ96_00915 PF00990 Diguanylate cyclase, GGDEF domain HPJ96_00920 PF07694 5TMR of 5TMR-LYT HPJ96_00920 PF00990 Diguanylate cyclase, GGDEF domain HPJ96_00930 PF01301 Glycosyl hydrolases family 35 HPJ96_00930 PF01301 Glycosyl hydrolases family 35 HPJ96_00935 PF00294 pfkB family carbohydrate kinase HPJ96_00940 PF01081 KDPG and KHG aldolase HPJ96_00945 PF00571 CBS domain HPJ96_00945 PF03471 Transporter associated domain HPJ96_00945 PF01595 Cyclin M transmembrane N-terminal domain HPJ96_00950 PF03471 Transporter associated domain HPJ96_00950 PF01595 Cyclin M transmembrane N-terminal domain HPJ96_00950 PF00571 CBS domain HPJ96_00955 PF08269 Cache domain HPJ96_00955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_00965 PF00301 Rubredoxin HPJ96_00970 PF00795 Carbon-nitrogen hydrolase HPJ96_00975 PF01226 Formate/nitrite transporter HPJ96_01000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPJ96_01010 PF00730 HhH-GPD superfamily base excision DNA repair protein HPJ96_01015 PF00209 Sodium:neurotransmitter symporter family HPJ96_01020 PF01212 Beta-eliminating lyase HPJ96_01030 PF18273 Type III R-M EcoP15I C-terminal domain HPJ96_01030 PF01555 DNA methylase HPJ96_01035 PF04851 Type III restriction enzyme, res subunit HPJ96_01035 PF08774 VRR-NUC domain HPJ96_01045 PF00665 Integrase core domain HPJ96_01045 PF13276 HTH-like domain HPJ96_01045 PF13333 Integrase core domain HPJ96_01065 PF00881 Nitroreductase family HPJ96_01070 PF00266 Aminotransferase class-V HPJ96_01075 PF09334 tRNA synthetases class I (M) HPJ96_01075 PF01588 Putative tRNA binding domain HPJ96_01080 PF13932 GidA associated domain HPJ96_01080 PF01134 Glucose inhibited division protein A HPJ96_01105 PF05362 Lon protease (S16) C-terminal proteolytic domain HPJ96_01105 PF13654 AAA domain HPJ96_01125 PF02872 5'-nucleotidase, C-terminal domain HPJ96_01125 PF00149 Calcineurin-like phosphoesterase HPJ96_01130 PF03459 TOBE domain HPJ96_01130 PF17912 MalK OB fold domain HPJ96_01130 PF00005 ABC transporter HPJ96_01135 PF03577 Peptidase family C69 HPJ96_01140 PF00248 Aldo/keto reductase family HPJ96_01150 PF07729 FCD domain HPJ96_01150 PF00392 Bacterial regulatory proteins, gntR family HPJ96_01155 PF00392 Bacterial regulatory proteins, gntR family HPJ96_01155 PF07729 FCD domain HPJ96_01170 PF00884 Sulfatase HPJ96_01175 PF00884 Sulfatase HPJ96_01205 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HPJ96_01215 PF01702 Queuine tRNA-ribosyltransferase HPJ96_01220 PF02576 RimP N-terminal domain HPJ96_01220 PF17384 RimP C-terminal SH3 domain HPJ96_01225 PF00575 S1 RNA binding domain HPJ96_01225 PF08529 NusA N-terminal domain HPJ96_01225 PF13184 NusA-like KH domain HPJ96_01230 PF04760 Translation initiation factor IF-2, N-terminal region HPJ96_01230 PF11987 Translation-initiation factor 2 HPJ96_01230 PF00009 Elongation factor Tu GTP binding domain HPJ96_01235 PF02033 Ribosome-binding factor A HPJ96_01240 PF01509 TruB family pseudouridylate synthase (N terminal domain) HPJ96_01240 PF16198 tRNA pseudouridylate synthase B C-terminal domain HPJ96_01245 PF06574 FAD synthetase HPJ96_01245 PF01687 Riboflavin kinase HPJ96_01250 PF00312 Ribosomal protein S15 HPJ96_01255 PF01138 3' exoribonuclease family, domain 1 HPJ96_01255 PF00013 KH domain HPJ96_01255 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HPJ96_01255 PF03725 3' exoribonuclease family, domain 2 HPJ96_01255 PF00575 S1 RNA binding domain HPJ96_01260 PF00692 dUTPase HPJ96_01280 PF01609 Transposase DDE domain HPJ96_01280 PF05598 Transposase domain (DUF772) HPJ96_01295 PF00665 Integrase core domain HPJ96_01295 PF13333 Integrase core domain HPJ96_01300 PF01914 MarC family integral membrane protein HPJ96_01310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPJ96_01310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPJ96_01310 PF03129 Anticodon binding domain HPJ96_01315 PF17191 RecG wedge domain HPJ96_01315 PF00271 Helicase conserved C-terminal domain HPJ96_01315 PF00270 DEAD/DEAH box helicase HPJ96_01320 PF02872 5'-nucleotidase, C-terminal domain HPJ96_01320 PF00149 Calcineurin-like phosphoesterase HPJ96_01330 PF10458 Valyl tRNA synthetase tRNA binding arm HPJ96_01330 PF00133 tRNA synthetases class I (I, L, M and V) HPJ96_01330 PF08264 Anticodon-binding domain of tRNA HPJ96_01345 PF00005 ABC transporter HPJ96_01345 PF00664 ABC transporter transmembrane region HPJ96_01350 PF00664 ABC transporter transmembrane region HPJ96_01350 PF00005 ABC transporter HPJ96_01370 PF00005 ABC transporter HPJ96_01395 PF00245 Alkaline phosphatase HPJ96_01410 PF01145 SPFH domain / Band 7 family HPJ96_01415 PF01145 SPFH domain / Band 7 family HPJ96_01420 PF01547 Bacterial extracellular solute-binding protein HPJ96_01425 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_01435 PF02511 Thymidylate synthase complementing protein HPJ96_01450 PF00005 ABC transporter HPJ96_01455 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_01460 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPJ96_01470 PF01048 Phosphorylase superfamily HPJ96_01485 PF03553 Na+/H+ antiporter family HPJ96_01490 PF00117 Glutamine amidotransferase class-I HPJ96_01490 PF06418 CTP synthase N-terminus HPJ96_01500 PF00271 Helicase conserved C-terminal domain HPJ96_01500 PF00176 SNF2 family N-terminal domain HPJ96_01500 PF12419 SNF2 Helicase protein HPJ96_01515 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HPJ96_01525 PF08668 HDOD domain HPJ96_01530 PF02699 Preprotein translocase subunit HPJ96_01535 PF02355 Protein export membrane protein HPJ96_01540 PF02355 Protein export membrane protein HPJ96_01550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPJ96_01550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPJ96_01550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPJ96_01550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPJ96_01560 PF05524 PEP-utilising enzyme, N-terminal HPJ96_01560 PF00391 PEP-utilising enzyme, mobile domain HPJ96_01560 PF02896 PEP-utilising enzyme, TIM barrel domain HPJ96_01575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPJ96_01590 PF04620 Flagellar filament outer layer protein Flaa HPJ96_01600 PF01116 Fructose-bisphosphate aldolase class-II HPJ96_01610 PF13395 HNH endonuclease HPJ96_01610 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 HPJ96_01610 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 HPJ96_01610 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 HPJ96_01620 PF13395 HNH endonuclease HPJ96_01620 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 HPJ96_01620 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 HPJ96_01620 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 HPJ96_01635 PF04172 LrgB-like family HPJ96_01650 PF02653 Branched-chain amino acid transport system / permease component HPJ96_01655 PF02653 Branched-chain amino acid transport system / permease component HPJ96_01660 PF00005 ABC transporter HPJ96_01665 PF02608 ABC transporter substrate-binding protein PnrA-like HPJ96_01680 PF00830 Ribosomal L28 family HPJ96_01690 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HPJ96_01690 PF00271 Helicase conserved C-terminal domain HPJ96_01690 PF04408 Helicase associated domain (HA2) HPJ96_01690 PF00270 DEAD/DEAH box helicase HPJ96_01700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPJ96_01700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPJ96_01705 PF03616 Sodium/glutamate symporter HPJ96_01715 PF00364 Biotin-requiring enzyme HPJ96_01720 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPJ96_01725 PF01144 Coenzyme A transferase HPJ96_01730 PF01144 Coenzyme A transferase HPJ96_01735 PF01039 Carboxyl transferase domain HPJ96_01740 PF03616 Sodium/glutamate symporter HPJ96_01745 PF01869 BadF/BadG/BcrA/BcrD ATPase family HPJ96_01750 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HPJ96_01755 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HPJ96_01765 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_01775 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_01795 PF00860 Permease family HPJ96_01800 PF04260 Protein of unknown function (DUF436) HPJ96_01810 PF02743 Cache domain HPJ96_01810 PF00672 HAMP domain HPJ96_01810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_01830 PF04024 PspC domain HPJ96_01850 PF10996 Beta-Casp domain HPJ96_01850 PF00753 Metallo-beta-lactamase superfamily HPJ96_01850 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HPJ96_01855 PF00588 SpoU rRNA Methylase family HPJ96_01855 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPJ96_01860 PF01515 Phosphate acetyl/butaryl transferase HPJ96_01865 PF13176 Tetratricopeptide repeat HPJ96_01865 PF13174 Tetratricopeptide repeat HPJ96_01870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPJ96_01870 PF00672 HAMP domain HPJ96_01870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPJ96_01870 PF00512 His Kinase A (phospho-acceptor) domain HPJ96_01870 PF01627 Hpt domain HPJ96_01870 PF00072 Response regulator receiver domain HPJ96_01875 PF01258 Prokaryotic dksA/traR C4-type zinc finger HPJ96_01880 PF01176 Translation initiation factor 1A / IF-1 HPJ96_01885 PF00226 DnaJ domain HPJ96_01885 PF01556 DnaJ C terminal domain HPJ96_01885 PF00684 DnaJ central domain HPJ96_01890 PF00696 Amino acid kinase family HPJ96_01895 PF01841 Transglutaminase-like superfamily HPJ96_01910 PF09190 DALR domain HPJ96_01910 PF01406 tRNA synthetases class I (C) catalytic domain HPJ96_01915 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HPJ96_01915 PF01565 FAD binding domain HPJ96_01920 PF13545 Crp-like helix-turn-helix domain HPJ96_01920 PF00027 Cyclic nucleotide-binding domain HPJ96_01935 PF03705 CheR methyltransferase, all-alpha domain HPJ96_01935 PF01739 CheR methyltransferase, SAM binding domain HPJ96_01940 PF01339 CheB methylesterase HPJ96_01940 PF00072 Response regulator receiver domain HPJ96_01960 PF12705 PD-(D/E)XK nuclease superfamily HPJ96_01965 PF00580 UvrD/REP helicase N-terminal domain HPJ96_01965 PF12705 PD-(D/E)XK nuclease superfamily HPJ96_01965 PF13361 UvrD-like helicase C-terminal domain HPJ96_02195 PF01555 DNA methylase HPJ96_02250 PF01479 S4 domain HPJ96_02250 PF00849 RNA pseudouridylate synthase HPJ96_02265 PF00704 Glycosyl hydrolases family 18 HPJ96_02265 PF00041 Fibronectin type III domain HPJ96_02295 PF07009 NusG domain II HPJ96_02300 PF01734 Patatin-like phospholipase HPJ96_02305 PF01545 Cation efflux family HPJ96_02305 PF16916 Dimerisation domain of Zinc Transporter HPJ96_02310 PF01212 Beta-eliminating lyase HPJ96_02315 PF01641 SelR domain HPJ96_02315 PF01625 Peptide methionine sulfoxide reductase HPJ96_02320 PF00672 HAMP domain HPJ96_02320 PF02203 Tar ligand binding domain homologue HPJ96_02320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HPJ96_02325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HPJ96_02330 PF02673 Bacitracin resistance protein BacA HPJ96_02335 PF09397 Ftsk gamma domain HPJ96_02335 PF17854 FtsK alpha domain HPJ96_02335 PF01580 FtsK/SpoIIIE family HPJ96_02355 PF02384 N-6 DNA Methylase HPJ96_02355 PF12161 HsdM N-terminal domain HPJ96_02370 PF01420 Type I restriction modification DNA specificity domain HPJ96_02380 PF01609 Transposase DDE domain HPJ96_02380 PF05598 Transposase domain (DUF772) HPJ96_02385 PF12008 Type I restriction and modification enzyme - subunit R C terminal HPJ96_02385 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPJ96_02385 PF18766 SWI2/SNF2 ATPase HPJ96_02395 PF00342 Phosphoglucose isomerase HPJ96_02410 PF05598 Transposase domain (DUF772) HPJ96_02410 PF01609 Transposase DDE domain HPJ96_02420 PF07730 Histidine kinase HPJ96_02425 PF00072 Response regulator receiver domain HPJ96_02425 PF00196 Bacterial regulatory proteins, luxR family HPJ96_02435 PF08676 MutL C terminal dimerisation domain HPJ96_02435 PF01119 DNA mismatch repair protein, C-terminal domain HPJ96_02455 PF16200 C-terminal region of band_7 HPJ96_02455 PF01145 SPFH domain / Band 7 family HPJ96_02460 PF01145 SPFH domain / Band 7 family HPJ96_02465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HPJ96_02465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPJ96_02470 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HPJ96_02470 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HPJ96_02475 PF01336 OB-fold nucleic acid binding domain HPJ96_02475 PF00152 tRNA synthetases class II (D, K and N) HPJ96_02475 PF02938 GAD domain HPJ96_02480 PF01547 Bacterial extracellular solute-binding protein HPJ96_02490 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPJ96_02495 PF01751 Toprim domain HPJ96_02495 PF00986 DNA gyrase B subunit, carboxyl terminus HPJ96_02495 PF00204 DNA gyrase B HPJ96_02510 PF03806 AbgT putative transporter family HPJ96_02515 PF00155 Aminotransferase class I and II HPJ96_02520 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HPJ96_02520 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HPJ96_02525 PF02609 Exonuclease VII small subunit HPJ96_02530 PF02554 Carbon starvation protein CstA HPJ96_02535 PF01048 Phosphorylase superfamily HPJ96_02550 PF11756 Nitrous oxide-stimulated promoter HPJ96_02560 PF00871 Acetokinase family HPJ96_02565 PF01554 MatE HPJ96_02570 PF03477 ATP cone domain HPJ96_02570 PF02867 Ribonucleotide reductase, barrel domain HPJ96_02570 PF00317 Ribonucleotide reductase, all-alpha domain HPJ96_02580 PF00696 Amino acid kinase family HPJ96_02585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPJ96_02585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPJ96_02600 PF00750 tRNA synthetases class I (R) HPJ96_02600 PF05746 DALR anticodon binding domain HPJ96_02600 PF03485 Arginyl tRNA synthetase N terminal domain HPJ96_02605 PF02562 PhoH-like protein HPJ96_02610 PF07698 7TM receptor with intracellular HD hydrolase HPJ96_02610 PF01966 HD domain HPJ96_02610 PF07697 7TM-HD extracellular HPJ96_02615 PF02130 Uncharacterized protein family UPF0054 HPJ96_02620 PF00571 CBS domain HPJ96_02620 PF03471 Transporter associated domain HPJ96_02645 PF01012 Electron transfer flavoprotein domain HPJ96_02645 PF00766 Electron transfer flavoprotein FAD-binding domain HPJ96_02650 PF01012 Electron transfer flavoprotein domain HPJ96_02655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPJ96_02655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPJ96_02655 PF02770 Acyl-CoA dehydrogenase, middle domain HPJ96_02660 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPJ96_02665 PF00011 Hsp20/alpha crystallin family HPJ96_02675 PF16363 GDP-mannose 4,6 dehydratase HPJ96_02690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02690 PF00672 HAMP domain HPJ96_02690 PF02743 Cache domain HPJ96_02695 PF03358 NADPH-dependent FMN reductase HPJ96_02710 PF03062 MBOAT, membrane-bound O-acyltransferase family HPJ96_02720 PF12169 DNA polymerase III subunits gamma and tau domain III HPJ96_02725 PF02575 YbaB/EbfC DNA-binding family HPJ96_02730 PF02132 RecR protein HPJ96_02730 PF13662 Toprim domain HPJ96_02740 PF01259 SAICAR synthetase HPJ96_02745 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HPJ96_02745 PF02769 AIR synthase related protein, C-terminal domain HPJ96_02745 PF00586 AIR synthase related protein, N-terminal domain HPJ96_02750 PF00731 AIR carboxylase HPJ96_02755 PF00156 Phosphoribosyl transferase domain HPJ96_02760 PF05525 Branched-chain amino acid transport protein HPJ96_02765 PF00155 Aminotransferase class I and II HPJ96_02770 PF01037 Lrp/AsnC ligand binding domain HPJ96_02775 PF00155 Aminotransferase class I and II HPJ96_02775 PF00392 Bacterial regulatory proteins, gntR family HPJ96_02780 PF01680 SOR/SNZ family HPJ96_02785 PF13361 UvrD-like helicase C-terminal domain HPJ96_02785 PF00580 UvrD/REP helicase N-terminal domain HPJ96_02805 PF01555 DNA methylase HPJ96_02810 PF01555 DNA methylase HPJ96_02820 PF01609 Transposase DDE domain HPJ96_02825 PF00672 HAMP domain HPJ96_02825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02825 PF02743 Cache domain HPJ96_02850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02850 PF00672 HAMP domain HPJ96_02850 PF02743 Cache domain HPJ96_02855 PF02743 Cache domain HPJ96_02855 PF00672 HAMP domain HPJ96_02855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02855 PF02743 Cache domain HPJ96_02855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02855 PF00672 HAMP domain HPJ96_02870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02870 PF02743 Cache domain HPJ96_02870 PF00672 HAMP domain HPJ96_02880 PF01555 DNA methylase HPJ96_02890 PF00589 Phage integrase family HPJ96_02890 PF13495 Phage integrase, N-terminal SAM-like domain HPJ96_02895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02895 PF02743 Cache domain HPJ96_02895 PF00672 HAMP domain HPJ96_02900 PF01609 Transposase DDE domain HPJ96_02910 PF02661 Fic/DOC family HPJ96_02910 PF13784 Fic/DOC family N-terminal HPJ96_02920 PF00403 Heavy-metal-associated domain HPJ96_02930 PF01022 Bacterial regulatory protein, arsR family HPJ96_02960 PF00672 HAMP domain HPJ96_02960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02960 PF02743 Cache domain HPJ96_02970 PF04205 FMN-binding domain HPJ96_02970 PF03358 NADPH-dependent FMN reductase HPJ96_02970 PF00890 FAD binding domain HPJ96_02975 PF08279 HTH domain HPJ96_02975 PF03099 Biotin/lipoate A/B protein ligase family HPJ96_02975 PF02237 Biotin protein ligase C terminal domain HPJ96_02985 PF02743 Cache domain HPJ96_02985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_02985 PF00672 HAMP domain HPJ96_02990 PF00672 HAMP domain HPJ96_02990 PF02743 Cache domain HPJ96_02990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_03000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_03000 PF16591 Helical bimodular sensor domain HPJ96_03000 PF00672 HAMP domain HPJ96_03015 PF02080 TrkA-C domain HPJ96_03015 PF02254 TrkA-N domain HPJ96_03030 PF02527 rRNA small subunit methyltransferase G HPJ96_03035 PF03553 Na+/H+ antiporter family HPJ96_03075 PF00571 CBS domain HPJ96_03075 PF01595 Cyclin M transmembrane N-terminal domain HPJ96_03075 PF03471 Transporter associated domain HPJ96_03085 PF00700 Bacterial flagellin C-terminal helical region HPJ96_03085 PF00669 Bacterial flagellin N-terminal helical region HPJ96_03090 PF02901 Pyruvate formate lyase-like HPJ96_03090 PF01228 Glycine radical HPJ96_03095 PF04055 Radical SAM superfamily HPJ96_03115 PF02895 Signal transducing histidine kinase, homodimeric domain HPJ96_03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPJ96_03115 PF01627 Hpt domain HPJ96_03115 PF07194 P2 response regulator binding domain HPJ96_03115 PF01584 CheW-like domain HPJ96_03120 PF01584 CheW-like domain HPJ96_03130 PF00072 Response regulator receiver domain HPJ96_03140 PF06470 SMC proteins Flexible Hinge Domain HPJ96_03140 PF02463 RecF/RecN/SMC N terminal domain HPJ96_03150 PF13525 Outer membrane lipoprotein HPJ96_03155 PF18073 Rubredoxin metal binding domain HPJ96_03155 PF06745 KaiC HPJ96_03180 PF01991 ATP synthase (E/31 kDa) subunit HPJ96_03190 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPJ96_03190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPJ96_03190 PF16886 ATPsynthase alpha/beta subunit N-term extension HPJ96_03195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPJ96_03195 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPJ96_03200 PF01813 ATP synthase subunit D HPJ96_03215 PF03309 Type III pantothenate kinase HPJ96_03220 PF04304 Protein of unknown function (DUF454) HPJ96_03225 PF02875 Mur ligase family, glutamate ligase domain HPJ96_03225 PF08245 Mur ligase middle domain HPJ96_03230 PF00849 RNA pseudouridylate synthase HPJ96_03235 PF00849 RNA pseudouridylate synthase HPJ96_03245 PF00398 Ribosomal RNA adenine dimethylase HPJ96_03250 PF03772 Competence protein HPJ96_03250 PF13567 Domain of unknown function (DUF4131) HPJ96_03250 PF00753 Metallo-beta-lactamase superfamily HPJ96_03270 PF00118 TCP-1/cpn60 chaperonin family HPJ96_03275 PF13291 ACT domain HPJ96_03275 PF04607 Region found in RelA / SpoT proteins HPJ96_03275 PF02824 TGS domain HPJ96_03280 PF17827 PrmC N-terminal domain HPJ96_03280 PF05175 Methyltransferase small domain HPJ96_03285 PF00501 AMP-binding enzyme HPJ96_03290 PF18357 Diphteria toxin repressor SH3 domain HPJ96_03290 PF02742 Iron dependent repressor, metal binding and dimerisation domain HPJ96_03290 PF01325 Iron dependent repressor, N-terminal DNA binding domain HPJ96_03295 PF00950 ABC 3 transport family HPJ96_03300 PF00950 ABC 3 transport family HPJ96_03305 PF00005 ABC transporter HPJ96_03310 PF01297 Zinc-uptake complex component A periplasmic HPJ96_03315 PF18610 Periplasmic binding protein domain HPJ96_03315 PF13407 Periplasmic binding protein domain HPJ96_03320 PF00005 ABC transporter HPJ96_03325 PF02653 Branched-chain amino acid transport system / permease component HPJ96_03540 PF01555 DNA methylase HPJ96_03550 PF02772 S-adenosylmethionine synthetase, central domain HPJ96_03550 PF00438 S-adenosylmethionine synthetase, N-terminal domain HPJ96_03550 PF02773 S-adenosylmethionine synthetase, C-terminal domain HPJ96_03575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_03575 PF02743 Cache domain HPJ96_03575 PF00672 HAMP domain HPJ96_03580 PF13367 PrsW family intramembrane metalloprotease HPJ96_03585 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HPJ96_03585 PF02843 Phosphoribosylglycinamide synthetase, C domain HPJ96_03585 PF02844 Phosphoribosylglycinamide synthetase, N domain HPJ96_03590 PF02142 MGS-like domain HPJ96_03590 PF01808 AICARFT/IMPCHase bienzyme HPJ96_03615 PF04542 Sigma-70 region 2 HPJ96_03615 PF00140 Sigma-70 factor, region 1.2 HPJ96_03615 PF04539 Sigma-70 region 3 HPJ96_03615 PF04545 Sigma-70, region 4 HPJ96_03615 PF03979 Sigma-70 factor, region 1.1 HPJ96_03620 PF13416 Bacterial extracellular solute-binding protein HPJ96_03625 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_03630 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_03635 PF08402 TOBE domain HPJ96_03635 PF00005 ABC transporter HPJ96_03640 PF00753 Metallo-beta-lactamase superfamily HPJ96_03650 PF03880 DbpA RNA binding domain HPJ96_03660 PF00465 Iron-containing alcohol dehydrogenase HPJ96_03670 PF00877 NlpC/P60 family HPJ96_03670 PF01476 LysM domain HPJ96_03675 PF00501 AMP-binding enzyme HPJ96_03675 PF13193 AMP-binding enzyme C-terminal domain HPJ96_03680 PF09335 SNARE associated Golgi protein HPJ96_03685 PF02540 NAD synthase HPJ96_03700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPJ96_03705 PF02080 TrkA-C domain HPJ96_03705 PF02254 TrkA-N domain HPJ96_03710 PF02386 Cation transport protein HPJ96_03720 PF01555 DNA methylase HPJ96_03730 PF03006 Haemolysin-III related HPJ96_03750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_03750 PF00672 HAMP domain HPJ96_03750 PF02743 Cache domain HPJ96_03755 PF17757 UvrB interaction domain HPJ96_03755 PF03461 TRCF domain HPJ96_03755 PF00271 Helicase conserved C-terminal domain HPJ96_03755 PF00270 DEAD/DEAH box helicase HPJ96_03755 PF02559 CarD-like/TRCF domain HPJ96_03765 PF03448 MgtE intracellular N domain HPJ96_03765 PF01769 Divalent cation transporter HPJ96_03765 PF00571 CBS domain HPJ96_03770 PF01842 ACT domain HPJ96_03770 PF03447 Homoserine dehydrogenase, NAD binding domain HPJ96_03770 PF00742 Homoserine dehydrogenase HPJ96_03775 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPJ96_03775 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPJ96_03780 PF04204 Homoserine O-succinyltransferase HPJ96_03785 PF01053 Cys/Met metabolism PLP-dependent enzyme HPJ96_03790 PF10672 S-adenosylmethionine-dependent methyltransferase HPJ96_03795 PF02629 CoA binding domain HPJ96_03795 PF06971 Putative DNA-binding protein N-terminus HPJ96_03805 PF00163 Ribosomal protein S4/S9 N-terminal domain HPJ96_03805 PF01479 S4 domain HPJ96_03810 PF00005 ABC transporter HPJ96_03810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPJ96_03815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPJ96_03815 PF00005 ABC transporter HPJ96_03825 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_03835 PF00268 Ribonucleotide reductase, small chain HPJ96_03840 PF03853 YjeF-related protein N-terminus HPJ96_03840 PF01256 Carbohydrate kinase HPJ96_03855 PF07683 Cobalamin synthesis protein cobW C-terminal domain HPJ96_03855 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPJ96_03860 PF00107 Zinc-binding dehydrogenase HPJ96_03860 PF08240 Alcohol dehydrogenase GroES-like domain HPJ96_03865 PF08220 DeoR-like helix-turn-helix domain HPJ96_03865 PF00455 DeoR C terminal sensor domain HPJ96_03875 PF00294 pfkB family carbohydrate kinase HPJ96_03880 PF01116 Fructose-bisphosphate aldolase class-II HPJ96_03885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPJ96_03885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPJ96_03890 PF01979 Amidohydrolase family HPJ96_03920 PF01894 Uncharacterised protein family UPF0047 HPJ96_03930 PF00271 Helicase conserved C-terminal domain HPJ96_03930 PF00270 DEAD/DEAH box helicase HPJ96_03950 PF00005 ABC transporter HPJ96_03965 PF03979 Sigma-70 factor, region 1.1 HPJ96_03965 PF04542 Sigma-70 region 2 HPJ96_03965 PF04545 Sigma-70, region 4 HPJ96_03965 PF04539 Sigma-70 region 3 HPJ96_03965 PF00140 Sigma-70 factor, region 1.2 HPJ96_03970 PF00166 Chaperonin 10 Kd subunit HPJ96_03975 PF00005 ABC transporter HPJ96_03980 PF02653 Branched-chain amino acid transport system / permease component HPJ96_03990 PF12627 Probable RNA and SrmB- binding site of polymerase A HPJ96_03990 PF12626 Polymerase A arginine-rich C-terminus HPJ96_03990 PF01743 Poly A polymerase head domain HPJ96_03995 PF00924 Mechanosensitive ion channel HPJ96_04010 PF17239 Family of unknown function (DUF5312) HPJ96_04025 PF12146 Serine aminopeptidase, S33 HPJ96_04035 PF03330 Lytic transglycolase HPJ96_04045 PF01026 TatD related DNase HPJ96_04050 PF01066 CDP-alcohol phosphatidyltransferase HPJ96_04055 PF00085 Thioredoxin HPJ96_04060 PF13545 Crp-like helix-turn-helix domain HPJ96_04060 PF00027 Cyclic nucleotide-binding domain HPJ96_04080 PF01520 N-acetylmuramoyl-L-alanine amidase HPJ96_04090 PF04620 Flagellar filament outer layer protein Flaa HPJ96_04095 PF04607 Region found in RelA / SpoT proteins HPJ96_04100 PF01649 Ribosomal protein S20 HPJ96_04105 PF00216 Bacterial DNA-binding protein HPJ96_04110 PF00795 Carbon-nitrogen hydrolase HPJ96_04120 PF18146 Damage-inducible protein CinA KH domain HPJ96_04120 PF02464 Competence-damaged protein HPJ96_04120 PF00994 Probable molybdopterin binding domain HPJ96_04125 PF07498 Rho termination factor, N-terminal domain HPJ96_04125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPJ96_04125 PF07497 Rho termination factor, RNA-binding domain HPJ96_04130 PF01197 Ribosomal protein L31 HPJ96_04145 PF00391 PEP-utilising enzyme, mobile domain HPJ96_04145 PF00224 Pyruvate kinase, barrel domain HPJ96_04145 PF02887 Pyruvate kinase, alpha/beta domain HPJ96_04160 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_04165 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_04180 PF01609 Transposase DDE domain HPJ96_04180 PF05598 Transposase domain (DUF772) HPJ96_04190 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_04195 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_04205 PF00885 6,7-dimethyl-8-ribityllumazine synthase HPJ96_04210 PF00925 GTP cyclohydrolase II HPJ96_04210 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPJ96_04215 PF00677 Lumazine binding domain HPJ96_04220 PF01872 RibD C-terminal domain HPJ96_04220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPJ96_04235 PF00005 ABC transporter HPJ96_04235 PF12848 ABC transporter HPJ96_04235 PF16326 ABC transporter C-terminal domain HPJ96_04240 PF08239 Bacterial SH3 domain HPJ96_04255 PF00293 NUDIX domain HPJ96_04265 PF00365 Phosphofructokinase HPJ96_04270 PF00436 Single-strand binding protein family HPJ96_04285 PF00309 Sigma-54 factor, Activator interacting domain (AID) HPJ96_04285 PF04552 Sigma-54, DNA binding domain HPJ96_04285 PF04963 Sigma-54 factor, core binding domain HPJ96_04295 PF01743 Poly A polymerase head domain HPJ96_04295 PF13735 tRNA nucleotidyltransferase domain 2 putative HPJ96_04295 PF12627 Probable RNA and SrmB- binding site of polymerase A HPJ96_04300 PF02542 YgbB family HPJ96_04305 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HPJ96_04305 PF02542 YgbB family HPJ96_04315 PF03144 Elongation factor Tu domain 2 HPJ96_04315 PF00009 Elongation factor Tu GTP binding domain HPJ96_04315 PF16658 Class II release factor RF3, C-terminal domain HPJ96_04325 PF17391 Urocanase N-terminal domain HPJ96_04325 PF17392 Urocanase C-terminal domain HPJ96_04325 PF01175 Urocanase Rossmann-like domain HPJ96_04340 PF01343 Peptidase family S49 HPJ96_04345 PF02403 Seryl-tRNA synthetase N-terminal domain HPJ96_04345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPJ96_04350 PF10502 Signal peptidase, peptidase S26 HPJ96_04365 PF14353 CpXC protein HPJ96_04370 PF17820 PDZ domain HPJ96_04370 PF02163 Peptidase family M50 HPJ96_04375 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HPJ96_04375 PF13288 DXP reductoisomerase C-terminal domain HPJ96_04375 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPJ96_04385 PF01255 Putative undecaprenyl diphosphate synthase HPJ96_04390 PF01765 Ribosome recycling factor HPJ96_04395 PF00889 Elongation factor TS HPJ96_04400 PF00318 Ribosomal protein S2 HPJ96_04410 PF13533 Biotin-lipoyl like HPJ96_04415 PF00005 ABC transporter HPJ96_04420 PF02687 FtsX-like permease family HPJ96_04420 PF12704 MacB-like periplasmic core domain HPJ96_04420 PF00005 ABC transporter HPJ96_04425 PF12704 MacB-like periplasmic core domain HPJ96_04425 PF02687 FtsX-like permease family HPJ96_04430 PF00270 DEAD/DEAH box helicase HPJ96_04430 PF00271 Helicase conserved C-terminal domain HPJ96_04445 PF00708 Acylphosphatase HPJ96_04460 PF01751 Toprim domain HPJ96_04460 PF00204 DNA gyrase B HPJ96_04460 PF00986 DNA gyrase B subunit, carboxyl terminus HPJ96_04460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPJ96_04505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_04505 PF00672 HAMP domain HPJ96_04505 PF02743 Cache domain HPJ96_04550 PF02308 MgtC family HPJ96_04555 PF16258 Domain of unknown function (DUF4912) HPJ96_04570 PF10609 NUBPL iron-transfer P-loop NTPase HPJ96_04580 PF01790 Prolipoprotein diacylglyceryl transferase HPJ96_04585 PF00521 DNA gyrase/topoisomerase IV, subunit A HPJ96_04605 PF07724 AAA domain (Cdc48 subfamily) HPJ96_04605 PF06689 ClpX C4-type zinc finger HPJ96_04605 PF10431 C-terminal, D2-small domain, of ClpB protein HPJ96_04610 PF00574 Clp protease HPJ96_04615 PF05697 Bacterial trigger factor protein (TF) HPJ96_04615 PF05698 Bacterial trigger factor protein (TF) C-terminus HPJ96_04615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPJ96_04650 PF00990 Diguanylate cyclase, GGDEF domain HPJ96_04650 PF00072 Response regulator receiver domain HPJ96_04660 PF01207 Dihydrouridine synthase (Dus) HPJ96_04665 PF01026 TatD related DNase HPJ96_04680 PF09588 YqaJ-like viral recombinase domain HPJ96_04700 PF03837 RecT family HPJ96_05065 PF01926 50S ribosome-binding GTPase HPJ96_05065 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPJ96_05070 PF13411 MerR HTH family regulatory protein HPJ96_05085 PF01668 SmpB protein HPJ96_05090 PF10502 Signal peptidase, peptidase S26 HPJ96_05095 PF04055 Radical SAM superfamily HPJ96_05095 PF06969 HemN C-terminal domain HPJ96_05105 PF01250 Ribosomal protein S6 HPJ96_05110 PF00436 Single-strand binding protein family HPJ96_05115 PF01084 Ribosomal protein S18 HPJ96_05120 PF03948 Ribosomal protein L9, C-terminal domain HPJ96_05120 PF01281 Ribosomal protein L9, N-terminal domain HPJ96_05125 PF00772 DnaB-like helicase N terminal domain HPJ96_05125 PF03796 DnaB-like helicase C terminal domain HPJ96_05160 PF12631 MnmE helical domain HPJ96_05160 PF10396 GTP-binding protein TrmE N-terminus HPJ96_05160 PF01926 50S ribosome-binding GTPase HPJ96_05165 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPJ96_05165 PF01926 50S ribosome-binding GTPase HPJ96_05195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPJ96_05195 PF02378 Phosphotransferase system, EIIC HPJ96_05195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPJ96_05210 PF04402 Protein of unknown function (DUF541) HPJ96_05215 PF00293 NUDIX domain HPJ96_05220 PF00226 DnaJ domain HPJ96_05220 PF01556 DnaJ C terminal domain HPJ96_05220 PF00684 DnaJ central domain HPJ96_05225 PF00012 Hsp70 protein HPJ96_05230 PF01025 GrpE HPJ96_05235 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPJ96_05235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPJ96_05240 PF16886 ATPsynthase alpha/beta subunit N-term extension HPJ96_05240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPJ96_05240 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPJ96_05260 PF01496 V-type ATPase 116kDa subunit family HPJ96_05265 PF01992 ATP synthase (C/AC39) subunit HPJ96_05275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPJ96_05275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPJ96_05280 PF03840 Preprotein translocase SecG subunit HPJ96_05295 PF04227 Indigoidine synthase A like protein HPJ96_05300 PF00294 pfkB family carbohydrate kinase HPJ96_05305 PF02381 MraZ protein, putative antitoxin-like HPJ96_05310 PF01795 MraW methylase family HPJ96_05320 PF02875 Mur ligase family, glutamate ligase domain HPJ96_05320 PF08245 Mur ligase middle domain HPJ96_05320 PF01225 Mur ligase family, catalytic domain HPJ96_05325 PF01098 Cell cycle protein HPJ96_05330 PF08478 POTRA domain, FtsQ-type HPJ96_05330 PF03799 Cell division protein FtsQ HPJ96_05335 PF02491 SHS2 domain inserted in FTSA HPJ96_05340 PF12327 FtsZ family, C-terminal domain HPJ96_05340 PF00091 Tubulin/FtsZ family, GTPase domain HPJ96_05345 PF00589 Phage integrase family HPJ96_05345 PF02899 Phage integrase, N-terminal SAM-like domain HPJ96_05355 PF02481 DNA recombination-mediator protein A HPJ96_05355 PF17782 DprA winged helix domain HPJ96_05360 PF01131 DNA topoisomerase HPJ96_05360 PF01396 Topoisomerase DNA binding C4 zinc finger HPJ96_05360 PF01751 Toprim domain HPJ96_05365 PF00589 Phage integrase family HPJ96_05365 PF02899 Phage integrase, N-terminal SAM-like domain HPJ96_05370 PF00227 Proteasome subunit HPJ96_05375 PF07724 AAA domain (Cdc48 subfamily) HPJ96_05375 PF00004 ATPase family associated with various cellular activities (AAA) HPJ96_05380 PF00460 Flagella basal body rod protein HPJ96_05385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPJ96_05385 PF00460 Flagella basal body rod protein HPJ96_05390 PF02049 Flagellar hook-basal body complex protein FliE HPJ96_05395 PF01514 Secretory protein of YscJ/FliF family HPJ96_05395 PF08345 Flagellar M-ring protein C-terminal HPJ96_05400 PF01706 FliG C-terminal domain HPJ96_05400 PF14842 FliG N-terminal domain HPJ96_05400 PF14841 FliG middle domain HPJ96_05405 PF02108 Flagellar assembly protein FliH HPJ96_05410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPJ96_05410 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPJ96_05410 PF18269 T3SS EscN ATPase C-terminal domain HPJ96_05420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPJ96_05420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPJ96_05430 PF00862 Sucrose synthase HPJ96_05430 PF00534 Glycosyl transferases group 1 HPJ96_05435 PF00270 DEAD/DEAH box helicase HPJ96_05435 PF00271 Helicase conserved C-terminal domain HPJ96_05455 PF07729 FCD domain HPJ96_05455 PF00392 Bacterial regulatory proteins, gntR family HPJ96_05475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HPJ96_05475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HPJ96_05480 PF01565 FAD binding domain HPJ96_05480 PF02913 FAD linked oxidases, C-terminal domain HPJ96_05485 PF02580 D-Tyr-tRNA(Tyr) deacylase HPJ96_05490 PF01195 Peptidyl-tRNA hydrolase HPJ96_05510 PF01546 Peptidase family M20/M25/M40 HPJ96_05510 PF07687 Peptidase dimerisation domain HPJ96_05525 PF06969 HemN C-terminal domain HPJ96_05525 PF04055 Radical SAM superfamily HPJ96_05535 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPJ96_05535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPJ96_05555 PF00403 Heavy-metal-associated domain HPJ96_05560 PF00294 pfkB family carbohydrate kinase HPJ96_05565 PF01048 Phosphorylase superfamily HPJ96_05570 PF00814 Glycoprotease family HPJ96_05580 PF02743 Cache domain HPJ96_05580 PF00672 HAMP domain HPJ96_05580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_05605 PF04002 RadC-like JAB domain HPJ96_05610 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HPJ96_05610 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HPJ96_05615 PF03450 CO dehydrogenase flavoprotein C-terminal domain HPJ96_05615 PF00941 FAD binding domain in molybdopterin dehydrogenase HPJ96_05620 PF00111 2Fe-2S iron-sulfur cluster binding domain HPJ96_05620 PF01799 [2Fe-2S] binding domain HPJ96_05635 PF13180 PDZ domain HPJ96_05635 PF17820 PDZ domain HPJ96_05640 PF01979 Amidohydrolase family HPJ96_05650 PF00106 short chain dehydrogenase HPJ96_05655 PF02616 Segregation and condensation protein ScpA HPJ96_05660 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPJ96_05665 PF00154 recA bacterial DNA recombination protein HPJ96_05675 PF00682 HMGL-like HPJ96_05675 PF00364 Biotin-requiring enzyme HPJ96_05675 PF02436 Conserved carboxylase domain HPJ96_05680 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPJ96_05685 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPJ96_05690 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPJ96_05695 PF03793 PASTA domain HPJ96_05705 PF02146 Sir2 family HPJ96_05710 PF02441 Flavoprotein HPJ96_05710 PF04127 DNA / pantothenate metabolism flavoprotein HPJ96_05715 PF18663 Pallilysin beta barrel domain HPJ96_05720 PF00929 Exonuclease HPJ96_05725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPJ96_05725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPJ96_05725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPJ96_05725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPJ96_05730 PF01812 5-formyltetrahydrofolate cyclo-ligase family HPJ96_05745 PF09820 Predicted AAA-ATPase HPJ96_05745 PF08011 PD-(D/E)XK nuclease superfamily HPJ96_05750 PF00486 Transcriptional regulatory protein, C terminal HPJ96_05750 PF00072 Response regulator receiver domain HPJ96_05790 PF12161 HsdM N-terminal domain HPJ96_05790 PF02384 N-6 DNA Methylase HPJ96_05815 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPJ96_05815 PF03807 NADP oxidoreductase coenzyme F420-dependent HPJ96_05830 PF09285 Elongation factor P, C-terminal HPJ96_05830 PF01132 Elongation factor P (EF-P) OB domain HPJ96_05830 PF08207 Elongation factor P (EF-P) KOW-like domain HPJ96_05840 PF00293 NUDIX domain HPJ96_05850 PF07724 AAA domain (Cdc48 subfamily) HPJ96_05850 PF00004 ATPase family associated with various cellular activities (AAA) HPJ96_05850 PF10431 C-terminal, D2-small domain, of ClpB protein HPJ96_05850 PF02861 Clp amino terminal domain, pathogenicity island component HPJ96_05850 PF17871 AAA lid domain HPJ96_05875 PF00465 Iron-containing alcohol dehydrogenase HPJ96_05895 PF02390 Putative methyltransferase HPJ96_05940 PF01740 STAS domain HPJ96_05950 PF00829 Ribosomal prokaryotic L21 protein HPJ96_05960 PF01016 Ribosomal L27 protein HPJ96_05965 PF01018 GTP1/OBG HPJ96_05965 PF01926 50S ribosome-binding GTPase HPJ96_05970 PF01467 Cytidylyltransferase-like HPJ96_05995 PF02446 4-alpha-glucanotransferase HPJ96_06015 PF00005 ABC transporter HPJ96_06020 PF03239 Iron permease FTR1 family HPJ96_06025 PF10634 Fe2+ transport protein HPJ96_06040 PF12704 MacB-like periplasmic core domain HPJ96_06040 PF02687 FtsX-like permease family HPJ96_06040 PF00005 ABC transporter HPJ96_06050 PF18755 Restriction Enzyme Adenine Methylase Associated HPJ96_06050 PF01555 DNA methylase HPJ96_06055 PF00005 ABC transporter HPJ96_06070 PF04205 FMN-binding domain HPJ96_06070 PF01794 Ferric reductase like transmembrane component HPJ96_06075 PF03060 Nitronate monooxygenase HPJ96_06080 PF00953 Glycosyl transferase family 4 HPJ96_06085 PF12838 4Fe-4S dicluster domain HPJ96_06095 PF01551 Peptidase family M23 HPJ96_06095 PF04225 Opacity-associated protein A LysM-like domain HPJ96_06105 PF00905 Penicillin binding protein transpeptidase domain HPJ96_06105 PF00912 Transglycosylase HPJ96_06105 PF17092 Penicillin-binding protein OB-like domain HPJ96_06110 PF12796 Ankyrin repeats (3 copies) HPJ96_06145 PF03590 Aspartate-ammonia ligase HPJ96_06155 PF04011 LemA family HPJ96_06165 PF04536 TPM domain HPJ96_06195 PF03600 Citrate transporter HPJ96_06200 PF02926 THUMP domain HPJ96_06200 PF02568 Thiamine biosynthesis protein (ThiI) HPJ96_06205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HPJ96_06215 PF00460 Flagella basal body rod protein HPJ96_06215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPJ96_06220 PF00392 Bacterial regulatory proteins, gntR family HPJ96_06220 PF07702 UTRA domain HPJ96_06225 PF00367 phosphotransferase system, EIIB HPJ96_06225 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPJ96_06225 PF02378 Phosphotransferase system, EIIC HPJ96_06235 PF00232 Glycosyl hydrolase family 1 HPJ96_06260 PF00672 HAMP domain HPJ96_06260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_06260 PF02743 Cache domain HPJ96_06265 PF02561 Flagellar protein FliS HPJ96_06275 PF04551 GcpE protein HPJ96_06285 PF00849 RNA pseudouridylate synthase HPJ96_06285 PF04287 tRNA pseudouridine synthase C HPJ96_06290 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HPJ96_06290 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HPJ96_06290 PF01189 16S rRNA methyltransferase RsmB/F HPJ96_06295 PF00563 EAL domain HPJ96_06295 PF00990 Diguanylate cyclase, GGDEF domain HPJ96_06295 PF08448 PAS fold HPJ96_06300 PF17151 Periplasmic sensor domain HPJ96_06300 PF00990 Diguanylate cyclase, GGDEF domain HPJ96_06320 PF01106 NifU-like domain HPJ96_06335 PF00326 Prolyl oligopeptidase family HPJ96_06335 PF07676 WD40-like Beta Propeller Repeat HPJ96_06340 PF02743 Cache domain HPJ96_06340 PF00672 HAMP domain HPJ96_06340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_06345 PF00512 His Kinase A (phospho-acceptor) domain HPJ96_06345 PF00989 PAS fold HPJ96_06345 PF16736 Single Cache-like HPJ96_06345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPJ96_06350 PF00486 Transcriptional regulatory protein, C terminal HPJ96_06350 PF00072 Response regulator receiver domain HPJ96_06355 PF01895 PhoU domain HPJ96_06360 PF00005 ABC transporter HPJ96_06365 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_06370 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_06375 PF12849 PBP superfamily domain HPJ96_06405 PF01926 50S ribosome-binding GTPase HPJ96_06405 PF07650 KH domain HPJ96_06410 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPJ96_06410 PF01926 50S ribosome-binding GTPase HPJ96_06440 PF06857 Malonate decarboxylase delta subunit (MdcD) HPJ96_06445 PF03328 HpcH/HpaI aldolase/citrate lyase family HPJ96_06450 PF04223 Citrate lyase, alpha subunit (CitF) HPJ96_06455 PF03390 2-hydroxycarboxylate transporter family HPJ96_06470 PF01555 DNA methylase HPJ96_06490 PF00005 ABC transporter HPJ96_06505 PF00440 Bacterial regulatory proteins, tetR family HPJ96_06510 PF01209 ubiE/COQ5 methyltransferase family HPJ96_06540 PF00892 EamA-like transporter family HPJ96_06545 PF02661 Fic/DOC family HPJ96_06545 PF12728 Helix-turn-helix domain HPJ96_06610 PF01555 DNA methylase HPJ96_06610 PF18273 Type III R-M EcoP15I C-terminal domain HPJ96_06635 PF00145 C-5 cytosine-specific DNA methylase HPJ96_06680 PF07690 Major Facilitator Superfamily HPJ96_06705 PF01609 Transposase DDE domain HPJ96_06705 PF05598 Transposase domain (DUF772) HPJ96_06735 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPJ96_06745 PF01209 ubiE/COQ5 methyltransferase family HPJ96_06770 PF01546 Peptidase family M20/M25/M40 HPJ96_06770 PF07687 Peptidase dimerisation domain HPJ96_06775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPJ96_06780 PF02272 DHHA1 domain HPJ96_06780 PF17768 RecJ OB domain HPJ96_06780 PF01368 DHH family HPJ96_06780 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HPJ96_06785 PF01551 Peptidase family M23 HPJ96_06785 PF01476 LysM domain HPJ96_06785 PF08525 Opacity-associated protein A N-terminal motif HPJ96_06790 PF00005 ABC transporter HPJ96_06790 PF00664 ABC transporter transmembrane region HPJ96_06795 PF00005 ABC transporter HPJ96_06795 PF00664 ABC transporter transmembrane region HPJ96_06800 PF00004 ATPase family associated with various cellular activities (AAA) HPJ96_06800 PF05362 Lon protease (S16) C-terminal proteolytic domain HPJ96_06800 PF02190 ATP-dependent protease La (LON) substrate-binding domain HPJ96_06815 PF13333 Integrase core domain HPJ96_06815 PF00665 Integrase core domain HPJ96_06830 PF01479 S4 domain HPJ96_06830 PF00849 RNA pseudouridylate synthase HPJ96_06855 PF00005 ABC transporter HPJ96_06855 PF00664 ABC transporter transmembrane region HPJ96_06860 PF08264 Anticodon-binding domain of tRNA HPJ96_06860 PF00133 tRNA synthetases class I (I, L, M and V) HPJ96_06905 PF00171 Aldehyde dehydrogenase family HPJ96_06915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPJ96_06915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPJ96_06920 PF02653 Branched-chain amino acid transport system / permease component HPJ96_06925 PF00005 ABC transporter HPJ96_06930 PF13407 Periplasmic binding protein domain HPJ96_06935 PF01261 Xylose isomerase-like TIM barrel HPJ96_06940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPJ96_06940 PF00205 Thiamine pyrophosphate enzyme, central domain HPJ96_06940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPJ96_06955 PF02447 GntP family permease HPJ96_06960 PF02595 Glycerate kinase family HPJ96_06965 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus HPJ96_06965 PF05175 Methyltransferase small domain HPJ96_06970 PF02401 LytB protein HPJ96_06975 PF00679 Elongation factor G C-terminus HPJ96_06975 PF14492 Elongation Factor G, domain II HPJ96_06975 PF03764 Elongation factor G, domain IV HPJ96_06975 PF00009 Elongation factor Tu GTP binding domain HPJ96_06975 PF03144 Elongation factor Tu domain 2 HPJ96_06990 PF04452 RNA methyltransferase HPJ96_07015 PF04055 Radical SAM superfamily HPJ96_07025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPJ96_07025 PF07196 Flagellin hook IN motif HPJ96_07030 PF00669 Bacterial flagellin N-terminal helical region HPJ96_07030 PF08884 Flagellin D3 domain HPJ96_07030 PF00700 Bacterial flagellin C-terminal helical region HPJ96_07035 PF02623 FliW protein HPJ96_07040 PF02599 Global regulator protein family HPJ96_07045 PF14602 Hexapeptide repeat of succinyl-transferase HPJ96_07045 PF12464 Maltose acetyltransferase HPJ96_07050 PF01156 Inosine-uridine preferring nucleoside hydrolase HPJ96_07055 PF03051 Peptidase C1-like family HPJ96_07070 PF14821 Threonine synthase N terminus HPJ96_07070 PF00291 Pyridoxal-phosphate dependent enzyme HPJ96_07085 PF00672 HAMP domain HPJ96_07085 PF01966 HD domain HPJ96_07090 PF00814 Glycoprotease family HPJ96_07095 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HPJ96_07100 PF02151 UvrB/uvrC motif HPJ96_07100 PF01541 GIY-YIG catalytic domain HPJ96_07100 PF08459 UvrC Helix-hairpin-helix N-terminal HPJ96_07115 PF00672 HAMP domain HPJ96_07115 PF00211 Adenylate and Guanylate cyclase catalytic domain HPJ96_07125 PF00691 OmpA family HPJ96_07130 PF01078 Magnesium chelatase, subunit ChlI HPJ96_07130 PF13335 Magnesium chelatase, subunit ChlI C-terminal HPJ96_07135 PF00700 Bacterial flagellin C-terminal helical region HPJ96_07135 PF00669 Bacterial flagellin N-terminal helical region HPJ96_07140 PF00669 Bacterial flagellin N-terminal helical region HPJ96_07140 PF00700 Bacterial flagellin C-terminal helical region HPJ96_07150 PF02465 Flagellar hook-associated protein 2 N-terminus HPJ96_07150 PF07195 Flagellar hook-associated protein 2 C-terminus HPJ96_07175 PF01479 S4 domain HPJ96_07175 PF00849 RNA pseudouridylate synthase HPJ96_07200 PF03167 Uracil DNA glycosylase superfamily HPJ96_07205 PF00270 DEAD/DEAH box helicase HPJ96_07205 PF00271 Helicase conserved C-terminal domain HPJ96_07205 PF17764 3′ DNA-binding domain (3′BD) HPJ96_07205 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HPJ96_07205 PF18074 Primosomal protein N C-terminal domain HPJ96_07210 PF02719 Polysaccharide biosynthesis protein HPJ96_07215 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HPJ96_07230 PF00005 ABC transporter HPJ96_07235 PF02687 FtsX-like permease family HPJ96_07235 PF12704 MacB-like periplasmic core domain HPJ96_07245 PF00448 SRP54-type protein, GTPase domain HPJ96_07245 PF02881 SRP54-type protein, helical bundle domain HPJ96_07275 PF01676 Metalloenzyme superfamily HPJ96_07280 PF01168 Alanine racemase, N-terminal domain HPJ96_07285 PF00155 Aminotransferase class I and II HPJ96_07295 PF10797 Protein of unknown function HPJ96_07300 PF10941 Protein of unknown function DUF2620 HPJ96_07305 PF00144 Beta-lactamase HPJ96_07320 PF02875 Mur ligase family, glutamate ligase domain HPJ96_07320 PF08245 Mur ligase middle domain HPJ96_07340 PF07687 Peptidase dimerisation domain HPJ96_07340 PF01546 Peptidase family M20/M25/M40 HPJ96_07350 PF00950 ABC 3 transport family HPJ96_07355 PF00005 ABC transporter HPJ96_07360 PF01297 Zinc-uptake complex component A periplasmic HPJ96_07375 PF01973 Protein of unknown function DUF115 HPJ96_07385 PF02915 Rubrerythrin HPJ96_07405 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HPJ96_07405 PF00391 PEP-utilising enzyme, mobile domain HPJ96_07405 PF02896 PEP-utilising enzyme, TIM barrel domain HPJ96_07410 PF01842 ACT domain HPJ96_07410 PF03315 Serine dehydratase beta chain HPJ96_07415 PF03313 Serine dehydratase alpha chain HPJ96_07430 PF01204 Trehalase HPJ96_07435 PF02637 GatB domain HPJ96_07435 PF02934 GatB/GatE catalytic domain HPJ96_07445 PF03717 Penicillin-binding Protein dimerisation domain HPJ96_07445 PF03793 PASTA domain HPJ96_07445 PF00905 Penicillin binding protein transpeptidase domain HPJ96_07455 PF07085 DRTGG domain HPJ96_07455 PF01368 DHH family HPJ96_07455 PF02833 DHHA2 domain HPJ96_07455 PF00571 CBS domain HPJ96_07470 PF00795 Carbon-nitrogen hydrolase HPJ96_07475 PF08544 GHMP kinases C terminal HPJ96_07475 PF10509 Galactokinase galactose-binding signature HPJ96_07480 PF01975 Survival protein SurE HPJ96_07505 PF01476 LysM domain HPJ96_07505 PF01551 Peptidase family M23 HPJ96_07505 PF08525 Opacity-associated protein A N-terminal motif HPJ96_07520 PF09588 YqaJ-like viral recombinase domain HPJ96_07540 PF03837 RecT family HPJ96_07865 PF01476 LysM domain HPJ96_07865 PF08525 Opacity-associated protein A N-terminal motif HPJ96_07865 PF01551 Peptidase family M23 HPJ96_07870 PF02361 Cobalt transport protein HPJ96_07870 PF00005 ABC transporter HPJ96_07875 PF08543 Phosphomethylpyrimidine kinase HPJ96_07880 PF09334 tRNA synthetases class I (M) HPJ96_07880 PF08264 Anticodon-binding domain of tRNA HPJ96_07880 PF00133 tRNA synthetases class I (I, L, M and V) HPJ96_07880 PF13603 Leucyl-tRNA synthetase, Domain 2 HPJ96_07890 PF03102 NeuB family HPJ96_07890 PF08666 SAF domain HPJ96_07905 PF00817 impB/mucB/samB family HPJ96_07905 PF11798 IMS family HHH motif HPJ96_07905 PF11799 impB/mucB/samB family C-terminal domain HPJ96_07910 PF17962 Bacterial macroglobulin domain 6 HPJ96_07910 PF07678 A-macroglobulin TED domain HPJ96_07910 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain HPJ96_07910 PF07703 Alpha-2-macroglobulin bait region domain HPJ96_07910 PF01835 MG2 domain HPJ96_07910 PF00207 Alpha-2-macroglobulin family HPJ96_07910 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain HPJ96_07910 PF11974 Bacterial alpha-2-macroglobulin MG3 domain HPJ96_07910 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain HPJ96_07915 PF06832 Penicillin-Binding Protein C-terminus Family HPJ96_07915 PF00912 Transglycosylase HPJ96_07915 PF00905 Penicillin binding protein transpeptidase domain HPJ96_07920 PF13614 AAA domain HPJ96_07925 PF02195 ParB-like nuclease domain HPJ96_07925 PF17762 HTH domain found in ParB protein HPJ96_07930 PF01475 Ferric uptake regulator family HPJ96_07935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPJ96_07935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPJ96_07945 PF01476 LysM domain HPJ96_07945 PF01464 Transglycosylase SLT domain HPJ96_07960 PF00156 Phosphoribosyl transferase domain HPJ96_07965 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_07995 PF00072 Response regulator receiver domain HPJ96_07995 PF00196 Bacterial regulatory proteins, luxR family HPJ96_08010 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPJ96_08010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPJ96_08015 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HPJ96_08015 PF00970 Oxidoreductase FAD-binding domain HPJ96_08015 PF00175 Oxidoreductase NAD-binding domain HPJ96_08020 PF00574 Clp protease HPJ96_08035 PF13520 Amino acid permease HPJ96_08050 PF00005 ABC transporter HPJ96_08070 PF00696 Amino acid kinase family HPJ96_08075 PF00171 Aldehyde dehydrogenase family HPJ96_08110 PF05191 Adenylate kinase, active site lid HPJ96_08120 PF01783 Ribosomal L32p protein family HPJ96_08125 PF00550 Phosphopantetheine attachment site HPJ96_08130 PF14622 Ribonuclease-III-like HPJ96_08130 PF00035 Double-stranded RNA binding motif HPJ96_08135 PF05598 Transposase domain (DUF772) HPJ96_08135 PF01609 Transposase DDE domain HPJ96_08140 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HPJ96_08150 PF01479 S4 domain HPJ96_08150 PF00849 RNA pseudouridylate synthase HPJ96_08155 PF04079 Segregation and condensation complex subunit ScpB HPJ96_08160 PF01963 TraB family HPJ96_08165 PF00579 tRNA synthetases class I (W and Y) HPJ96_08175 PF00005 ABC transporter HPJ96_08185 PF00391 PEP-utilising enzyme, mobile domain HPJ96_08185 PF02896 PEP-utilising enzyme, TIM barrel domain HPJ96_08200 PF13519 von Willebrand factor type A domain HPJ96_08205 PF01613 Flavin reductase like domain HPJ96_08205 PF00753 Metallo-beta-lactamase superfamily HPJ96_08210 PF01921 tRNA synthetases class I (K) HPJ96_08220 PF01813 ATP synthase subunit D HPJ96_08225 PF04998 RNA polymerase Rpb1, domain 5 HPJ96_08225 PF04997 RNA polymerase Rpb1, domain 1 HPJ96_08225 PF05000 RNA polymerase Rpb1, domain 4 HPJ96_08225 PF00623 RNA polymerase Rpb1, domain 2 HPJ96_08225 PF04983 RNA polymerase Rpb1, domain 3 HPJ96_08230 PF04565 RNA polymerase Rpb2, domain 3 HPJ96_08230 PF04560 RNA polymerase Rpb2, domain 7 HPJ96_08230 PF04563 RNA polymerase beta subunit HPJ96_08230 PF04561 RNA polymerase Rpb2, domain 2 HPJ96_08230 PF10385 RNA polymerase beta subunit external 1 domain HPJ96_08230 PF00562 RNA polymerase Rpb2, domain 6 HPJ96_08235 PF00542 Ribosomal protein L7/L12 C-terminal domain HPJ96_08235 PF16320 Ribosomal protein L7/L12 dimerisation domain HPJ96_08240 PF00466 Ribosomal protein L10 HPJ96_08245 PF00687 Ribosomal protein L1p/L10e family HPJ96_08250 PF03946 Ribosomal protein L11, N-terminal domain HPJ96_08250 PF00298 Ribosomal protein L11, RNA binding domain HPJ96_08255 PF02357 Transcription termination factor nusG HPJ96_08255 PF00467 KOW motif HPJ96_08260 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HPJ96_08270 PF00471 Ribosomal protein L33 HPJ96_08280 PF00258 Flavodoxin HPJ96_08300 PF01144 Coenzyme A transferase HPJ96_08305 PF01575 MaoC like domain HPJ96_08515 PF01555 DNA methylase HPJ96_08585 PF01381 Helix-turn-helix HPJ96_08585 PF00717 Peptidase S24-like HPJ96_08600 PF00004 ATPase family associated with various cellular activities (AAA) HPJ96_08600 PF17862 AAA+ lid domain HPJ96_08600 PF01434 Peptidase family M41 HPJ96_08615 PF00381 PTS HPr component phosphorylation site HPJ96_08620 PF07475 HPr Serine kinase C-terminal domain HPJ96_08620 PF02603 HPr Serine kinase N terminus HPJ96_08625 PF00872 Transposase, Mutator family HPJ96_08635 PF00288 GHMP kinases N terminal domain HPJ96_08635 PF08544 GHMP kinases C terminal HPJ96_08635 PF10509 Galactokinase galactose-binding signature HPJ96_08640 PF02446 4-alpha-glucanotransferase HPJ96_08650 PF00468 Ribosomal protein L34 HPJ96_08660 PF01809 Putative membrane protein insertion efficiency factor HPJ96_08665 PF14849 YidC periplasmic domain HPJ96_08665 PF02096 60Kd inner membrane protein HPJ96_08680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPJ96_08685 PF11992 Domain of unknown function (DUF3488) HPJ96_08685 PF01841 Transglutaminase-like superfamily HPJ96_08685 PF13559 Domain of unknown function (DUF4129) HPJ96_08695 PF07726 ATPase family associated with various cellular activities (AAA) HPJ96_08695 PF17863 AAA lid domain HPJ96_08700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPJ96_08710 PF00005 ABC transporter HPJ96_08710 PF08402 TOBE domain HPJ96_08715 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_08720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPJ96_08730 PF00448 SRP54-type protein, GTPase domain HPJ96_08730 PF02978 Signal peptide binding domain HPJ96_08730 PF02881 SRP54-type protein, helical bundle domain HPJ96_08745 PF03129 Anticodon binding domain HPJ96_08745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPJ96_08745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPJ96_08745 PF02824 TGS domain HPJ96_08780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPJ96_08780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPJ96_08785 PF00266 Aminotransferase class-V HPJ96_08790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPJ96_08790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPJ96_08805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPJ96_08820 PF00132 Bacterial transferase hexapeptide (six repeats) HPJ96_08825 PF00483 Nucleotidyl transferase HPJ96_08830 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPJ96_08860 PF02350 UDP-N-acetylglucosamine 2-epimerase HPJ96_08865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPJ96_08865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPJ96_08865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPJ96_08875 PF01370 NAD dependent epimerase/dehydratase family HPJ96_08895 PF16363 GDP-mannose 4,6 dehydratase HPJ96_08910 PF01042 Endoribonuclease L-PSP HPJ96_08915 PF02863 Arginine repressor, C-terminal domain HPJ96_08915 PF01316 Arginine repressor, DNA binding domain HPJ96_08920 PF02195 ParB-like nuclease domain HPJ96_08920 PF17762 HTH domain found in ParB protein HPJ96_08935 PF01066 CDP-alcohol phosphatidyltransferase HPJ96_08940 PF02838 Glycosyl hydrolase family 20, domain 2 HPJ96_08940 PF00728 Glycosyl hydrolase family 20, catalytic domain HPJ96_08940 PF07691 PA14 domain HPJ96_08945 PF13419 Haloacid dehalogenase-like hydrolase HPJ96_08965 PF00004 ATPase family associated with various cellular activities (AAA) HPJ96_08965 PF07724 AAA domain (Cdc48 subfamily) HPJ96_08965 PF17871 AAA lid domain HPJ96_08965 PF02861 Clp amino terminal domain, pathogenicity island component HPJ96_08965 PF10431 C-terminal, D2-small domain, of ClpB protein HPJ96_08970 PF02617 ATP-dependent Clp protease adaptor protein ClpS HPJ96_08980 PF02677 Epoxyqueuosine reductase QueH HPJ96_08985 PF03009 Glycerophosphoryl diester phosphodiesterase family HPJ96_08990 PF01467 Cytidylyltransferase-like HPJ96_08995 PF02325 YGGT family HPJ96_09000 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPJ96_09000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPJ96_09000 PF14579 Helix-hairpin-helix motif HPJ96_09000 PF02811 PHP domain HPJ96_09005 PF08245 Mur ligase middle domain HPJ96_09010 PF14102 Capsule biosynthesis CapC HPJ96_09045 PF00464 Serine hydroxymethyltransferase HPJ96_09060 PF01008 Initiation factor 2 subunit family HPJ96_09075 PF00072 Response regulator receiver domain HPJ96_09075 PF02954 Bacterial regulatory protein, Fis family HPJ96_09075 PF00158 Sigma-54 interaction domain HPJ96_09080 PF00575 S1 RNA binding domain HPJ96_09095 PF12706 Beta-lactamase superfamily domain HPJ96_09095 PF03099 Biotin/lipoate A/B protein ligase family HPJ96_09100 PF02690 Na+/Pi-cotransporter HPJ96_09115 PF01699 Sodium/calcium exchanger protein HPJ96_09125 PF16811 TRAP transporter T-component HPJ96_09135 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPJ96_09140 PF00583 Acetyltransferase (GNAT) family HPJ96_09140 PF08218 Citrate lyase ligase C-terminal domain HPJ96_09145 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HPJ96_09150 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HPJ96_09160 PF01235 Sodium:alanine symporter family HPJ96_09165 PF04960 Glutaminase HPJ96_09180 PF01725 Ham1 family HPJ96_09185 PF00654 Voltage gated chloride channel HPJ96_09190 PF13277 YmdB-like protein HPJ96_09195 PF13407 Periplasmic binding protein domain HPJ96_09200 PF01171 PP-loop family HPJ96_09205 PF00440 Bacterial regulatory proteins, tetR family HPJ96_09205 PF17932 Tetracyclin repressor-like, C-terminal domain HPJ96_09215 PF17131 Outer membrane lipoprotein-sorting protein HPJ96_09225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPJ96_09235 PF00579 tRNA synthetases class I (W and Y) HPJ96_09240 PF10135 Rod binding protein HPJ96_09245 PF00460 Flagella basal body rod protein HPJ96_09245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPJ96_09250 PF00186 Dihydrofolate reductase HPJ96_09265 PF01713 Smr domain HPJ96_09265 PF00488 MutS domain V HPJ96_09270 PF03193 RsgA GTPase HPJ96_09270 PF16745 RsgA N-terminal domain HPJ96_09275 PF01177 Asp/Glu/Hydantoin racemase HPJ96_09295 PF01165 Ribosomal protein S21 HPJ96_09300 PF01327 Polypeptide deformylase HPJ96_09305 PF02911 Formyl transferase, C-terminal domain HPJ96_09305 PF00551 Formyl transferase HPJ96_09310 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPJ96_09310 PF10371 Domain of unknown function HPJ96_09310 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPJ96_09310 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPJ96_09310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPJ96_09325 PF04023 FeoA domain HPJ96_09325 PF02421 Ferrous iron transport protein B HPJ96_09325 PF07664 Ferrous iron transport protein B C terminus HPJ96_09325 PF07670 Nucleoside recognition HPJ96_09325 PF17910 FeoB cytosolic helical domain HPJ96_09375 PF00158 Sigma-54 interaction domain HPJ96_09375 PF00072 Response regulator receiver domain HPJ96_09375 PF02954 Bacterial regulatory protein, Fis family HPJ96_09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPJ96_09380 PF00989 PAS fold HPJ96_09380 PF00512 His Kinase A (phospho-acceptor) domain HPJ96_09385 PF09115 DNA polymerase III, delta subunit, C terminal HPJ96_09390 PF02674 Colicin V production protein HPJ96_09395 PF03033 Glycosyltransferase family 28 N-terminal domain HPJ96_09395 PF04101 Glycosyltransferase family 28 C-terminal domain HPJ96_09415 PF13277 YmdB-like protein HPJ96_09425 PF00348 Polyprenyl synthetase HPJ96_09440 PF16314 Domain of unknown function (DUF4954) HPJ96_09445 PF00365 Phosphofructokinase HPJ96_09450 PF13276 HTH-like domain HPJ96_09450 PF00665 Integrase core domain HPJ96_09450 PF13333 Integrase core domain HPJ96_09455 PF00512 His Kinase A (phospho-acceptor) domain HPJ96_09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPJ96_09475 PF03477 ATP cone domain HPJ96_09480 PF13333 Integrase core domain HPJ96_09480 PF13276 HTH-like domain HPJ96_09480 PF00665 Integrase core domain HPJ96_09485 PF00665 Integrase core domain HPJ96_09485 PF13333 Integrase core domain HPJ96_09495 PF00152 tRNA synthetases class II (D, K and N) HPJ96_09495 PF01336 OB-fold nucleic acid binding domain HPJ96_09500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_09500 PF02743 Cache domain HPJ96_09500 PF00672 HAMP domain HPJ96_09510 PF00933 Glycosyl hydrolase family 3 N terminal domain HPJ96_09520 PF00183 Hsp90 protein HPJ96_09525 PF00571 CBS domain HPJ96_09530 PF00005 ABC transporter HPJ96_09535 PF12399 Branched-chain amino acid ATP-binding cassette transporter HPJ96_09535 PF00005 ABC transporter HPJ96_09540 PF11862 Domain of unknown function (DUF3382) HPJ96_09540 PF02653 Branched-chain amino acid transport system / permease component HPJ96_09545 PF02653 Branched-chain amino acid transport system / permease component HPJ96_09550 PF13458 Periplasmic binding protein HPJ96_09560 PF01192 RNA polymerase Rpb6 HPJ96_09570 PF00672 HAMP domain HPJ96_09570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_09570 PF02743 Cache domain HPJ96_09580 PF04977 Septum formation initiator HPJ96_09595 PF01973 Protein of unknown function DUF115 HPJ96_09600 PF01973 Protein of unknown function DUF115 HPJ96_09625 PF00834 Ribulose-phosphate 3 epimerase family HPJ96_09630 PF00013 KH domain HPJ96_09630 PF12072 Domain of unknown function (DUF3552) HPJ96_09630 PF01966 HD domain HPJ96_09640 PF02838 Glycosyl hydrolase family 20, domain 2 HPJ96_09640 PF00728 Glycosyl hydrolase family 20, catalytic domain HPJ96_09645 PF00768 D-alanyl-D-alanine carboxypeptidase HPJ96_09645 PF07943 Penicillin-binding protein 5, C-terminal domain HPJ96_09655 PF00009 Elongation factor Tu GTP binding domain HPJ96_09655 PF03144 Elongation factor Tu domain 2 HPJ96_09655 PF03764 Elongation factor G, domain IV HPJ96_09655 PF14492 Elongation Factor G, domain II HPJ96_09655 PF00679 Elongation factor G C-terminus HPJ96_09700 PF09382 RQC domain HPJ96_09700 PF00570 HRDC domain HPJ96_09700 PF00271 Helicase conserved C-terminal domain HPJ96_09700 PF16124 RecQ zinc-binding HPJ96_09700 PF00270 DEAD/DEAH box helicase HPJ96_09705 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_09710 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_09720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPJ96_09730 PF01261 Xylose isomerase-like TIM barrel HPJ96_09735 PF00596 Class II Aldolase and Adducin N-terminal domain HPJ96_09740 PF05524 PEP-utilising enzyme, N-terminal HPJ96_09740 PF00391 PEP-utilising enzyme, mobile domain HPJ96_09740 PF02896 PEP-utilising enzyme, TIM barrel domain HPJ96_09745 PF00381 PTS HPr component phosphorylation site HPJ96_09745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPJ96_09750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPJ96_09755 PF03611 PTS system sugar-specific permease component HPJ96_09770 PF05190 MutS family domain IV HPJ96_09770 PF05192 MutS domain III HPJ96_09770 PF05188 MutS domain II HPJ96_09770 PF01624 MutS domain I HPJ96_09770 PF00488 MutS domain V HPJ96_09780 PF01103 Surface antigen HPJ96_09780 PF07244 Surface antigen variable number repeat HPJ96_09790 PF02223 Thymidylate kinase HPJ96_09800 PF08534 Redoxin HPJ96_09805 PF01554 MatE HPJ96_09810 PF00072 Response regulator receiver domain HPJ96_09815 PF02631 RecX family HPJ96_09820 PF00380 Ribosomal protein S9/S16 HPJ96_09825 PF00572 Ribosomal protein L13 HPJ96_09835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPJ96_09835 PF00005 ABC transporter HPJ96_09840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPJ96_09840 PF00005 ABC transporter HPJ96_09845 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_09845 PF12911 N-terminal TM domain of oligopeptide transport permease C HPJ96_09850 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_09855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPJ96_09860 PF12631 MnmE helical domain HPJ96_09860 PF10396 GTP-binding protein TrmE N-terminus HPJ96_09860 PF01926 50S ribosome-binding GTPase HPJ96_09865 PF01569 PAP2 superfamily HPJ96_09880 PF02463 RecF/RecN/SMC N terminal domain HPJ96_09885 PF01513 ATP-NAD kinase HPJ96_09890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPJ96_09895 PF01584 CheW-like domain HPJ96_09905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_09905 PF00672 HAMP domain HPJ96_09905 PF02743 Cache domain HPJ96_09925 PF04542 Sigma-70 region 2 HPJ96_09925 PF08281 Sigma-70, region 4 HPJ96_09935 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPJ96_09935 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HPJ96_09940 PF07075 Protein of unknown function (DUF1343) HPJ96_09945 PF00144 Beta-lactamase HPJ96_09950 PF02386 Cation transport protein HPJ96_09955 PF02080 TrkA-C domain HPJ96_09955 PF02254 TrkA-N domain HPJ96_09970 PF17863 AAA lid domain HPJ96_09970 PF07726 ATPase family associated with various cellular activities (AAA) HPJ96_09985 PF01740 STAS domain HPJ96_10005 PF07516 SecA Wing and Scaffold domain HPJ96_10005 PF07517 SecA DEAD-like domain HPJ96_10005 PF01043 SecA preprotein cross-linking domain HPJ96_10005 PF02810 SEC-C motif HPJ96_10010 PF00664 ABC transporter transmembrane region HPJ96_10010 PF00005 ABC transporter HPJ96_10015 PF00375 Sodium:dicarboxylate symporter family HPJ96_10020 PF00291 Pyridoxal-phosphate dependent enzyme HPJ96_10020 PF13291 ACT domain HPJ96_10025 PF01053 Cys/Met metabolism PLP-dependent enzyme HPJ96_10030 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPJ96_10030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPJ96_10030 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPJ96_10030 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPJ96_10030 PF10371 Domain of unknown function HPJ96_10035 PF00221 Aromatic amino acid lyase HPJ96_10040 PF02028 BCCT, betaine/carnitine/choline family transporter HPJ96_10045 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_10050 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_10060 PF04041 beta-1,4-mannooligosaccharide phosphorylase HPJ96_10065 PF00356 Bacterial regulatory proteins, lacI family HPJ96_10070 PF00348 Polyprenyl synthetase HPJ96_10080 PF00156 Phosphoribosyl transferase domain HPJ96_10090 PF03313 Serine dehydratase alpha chain HPJ96_10110 PF00209 Sodium:neurotransmitter symporter family HPJ96_10115 PF13361 UvrD-like helicase C-terminal domain HPJ96_10115 PF00580 UvrD/REP helicase N-terminal domain HPJ96_10155 PF02021 Uncharacterised protein family UPF0102 HPJ96_10160 PF11871 Domain of unknown function (DUF3391) HPJ96_10160 PF01966 HD domain HPJ96_10165 PF01312 FlhB HrpN YscU SpaS Family HPJ96_10175 PF01245 Ribosomal protein L19 HPJ96_10180 PF01746 tRNA (Guanine-1)-methyltransferase HPJ96_10185 PF01782 RimM N-terminal domain HPJ96_10195 PF00886 Ribosomal protein S16 HPJ96_10220 PF00571 CBS domain HPJ96_10220 PF00478 IMP dehydrogenase / GMP reductase domain HPJ96_10225 PF00440 Bacterial regulatory proteins, tetR family HPJ96_10230 PF00005 ABC transporter HPJ96_10230 PF08021 Siderophore-interacting FAD-binding domain HPJ96_10230 PF00664 ABC transporter transmembrane region HPJ96_10230 PF04954 Siderophore-interacting protein HPJ96_10235 PF00005 ABC transporter HPJ96_10235 PF00664 ABC transporter transmembrane region HPJ96_10255 PF00890 FAD binding domain HPJ96_10255 PF14537 Cytochrome c3 HPJ96_10260 PF00164 Ribosomal protein S12/S23 HPJ96_10265 PF00177 Ribosomal protein S7p/S5e HPJ96_10280 PF01409 tRNA synthetases class II core domain (F) HPJ96_10320 PF00578 AhpC/TSA family HPJ96_10340 PF02608 ABC transporter substrate-binding protein PnrA-like HPJ96_10350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPJ96_10350 PF05524 PEP-utilising enzyme, N-terminal HPJ96_10350 PF00381 PTS HPr component phosphorylation site HPJ96_10350 PF00391 PEP-utilising enzyme, mobile domain HPJ96_10350 PF02896 PEP-utilising enzyme, TIM barrel domain HPJ96_10355 PF00919 Uncharacterized protein family UPF0004 HPJ96_10355 PF01938 TRAM domain HPJ96_10355 PF04055 Radical SAM superfamily HPJ96_10375 PF00881 Nitroreductase family HPJ96_10380 PF02073 Thermophilic metalloprotease (M29) HPJ96_10385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_10385 PF00672 HAMP domain HPJ96_10385 PF02743 Cache domain HPJ96_10420 PF05872 Bacterial protein of unknown function (DUF853) HPJ96_10430 PF00672 HAMP domain HPJ96_10430 PF00211 Adenylate and Guanylate cyclase catalytic domain HPJ96_10455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPJ96_10455 PF01411 tRNA synthetases class II (A) HPJ96_10460 PF13145 PPIC-type PPIASE domain HPJ96_10465 PF01029 NusB family HPJ96_10485 PF00162 Phosphoglycerate kinase HPJ96_10490 PF00121 Triosephosphate isomerase HPJ96_10505 PF01791 DeoC/LacD family aldolase HPJ96_10510 PF00300 Histidine phosphatase superfamily (branch 1) HPJ96_10525 PF01613 Flavin reductase like domain HPJ96_10530 PF13411 MerR HTH family regulatory protein HPJ96_10545 PF00465 Iron-containing alcohol dehydrogenase HPJ96_10555 PF02503 Polyphosphate kinase middle domain HPJ96_10555 PF13090 Polyphosphate kinase C-terminal domain 2 HPJ96_10555 PF17941 Polyphosphate kinase C-terminal domain 1 HPJ96_10555 PF13089 Polyphosphate kinase N-terminal domain HPJ96_10560 PF03616 Sodium/glutamate symporter HPJ96_10575 PF02743 Cache domain HPJ96_10575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_10575 PF00672 HAMP domain HPJ96_10630 PF00072 Response regulator receiver domain HPJ96_10630 PF00196 Bacterial regulatory proteins, luxR family HPJ96_10635 PF01706 FliG C-terminal domain HPJ96_10635 PF14841 FliG middle domain HPJ96_10635 PF14842 FliG N-terminal domain HPJ96_10640 PF05193 Peptidase M16 inactive domain HPJ96_10640 PF00675 Insulinase (Peptidase family M16) HPJ96_10640 PF08367 Peptidase M16C associated HPJ96_10650 PF13344 Haloacid dehalogenase-like hydrolase HPJ96_10655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPJ96_10665 PF03480 Bacterial extracellular solute-binding protein, family 7 HPJ96_10700 PF00270 DEAD/DEAH box helicase HPJ96_10700 PF00271 Helicase conserved C-terminal domain HPJ96_10700 PF09382 RQC domain HPJ96_10700 PF00570 HRDC domain HPJ96_10700 PF16124 RecQ zinc-binding HPJ96_10705 PF00288 GHMP kinases N terminal domain HPJ96_10705 PF08544 GHMP kinases C terminal HPJ96_10710 PF04026 SpoVG HPJ96_10720 PF14693 Ribosomal protein TL5, C-terminal domain HPJ96_10720 PF01386 Ribosomal L25p family HPJ96_10725 PF01171 PP-loop family HPJ96_10735 PF13180 PDZ domain HPJ96_10740 PF14492 Elongation Factor G, domain II HPJ96_10740 PF00009 Elongation factor Tu GTP binding domain HPJ96_10740 PF03144 Elongation factor Tu domain 2 HPJ96_10740 PF06421 GTP-binding protein LepA C-terminus HPJ96_10740 PF00679 Elongation factor G C-terminus HPJ96_10755 PF01032 FecCD transport family HPJ96_10760 PF01032 FecCD transport family HPJ96_10765 PF00005 ABC transporter HPJ96_10770 PF00691 OmpA family HPJ96_10830 PF00436 Single-strand binding protein family HPJ96_11090 PF00970 Oxidoreductase FAD-binding domain HPJ96_11090 PF00175 Oxidoreductase NAD-binding domain HPJ96_11090 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HPJ96_11095 PF01180 Dihydroorotate dehydrogenase HPJ96_11100 PF00156 Phosphoribosyl transferase domain HPJ96_11110 PF06733 DEAD_2 HPJ96_11110 PF13307 Helicase C-terminal domain HPJ96_11115 PF00842 Alanine racemase, C-terminal domain HPJ96_11115 PF01168 Alanine racemase, N-terminal domain HPJ96_11120 PF00557 Metallopeptidase family M24 HPJ96_11120 PF01321 Creatinase/Prolidase N-terminal domain HPJ96_11130 PF00679 Elongation factor G C-terminus HPJ96_11130 PF00009 Elongation factor Tu GTP binding domain HPJ96_11130 PF03764 Elongation factor G, domain IV HPJ96_11130 PF14492 Elongation Factor G, domain II HPJ96_11130 PF03144 Elongation factor Tu domain 2 HPJ96_11145 PF07238 PilZ domain HPJ96_11170 PF01556 DnaJ C terminal domain HPJ96_11170 PF00226 DnaJ domain HPJ96_11175 PF00557 Metallopeptidase family M24 HPJ96_11185 PF00456 Transketolase, thiamine diphosphate binding domain HPJ96_11185 PF02779 Transketolase, pyrimidine binding domain HPJ96_11190 PF01207 Dihydrouridine synthase (Dus) HPJ96_11210 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system HPJ96_11220 PF01926 50S ribosome-binding GTPase HPJ96_11220 PF07650 KH domain HPJ96_11225 PF00037 4Fe-4S binding domain HPJ96_11225 PF13187 4Fe-4S dicluster domain HPJ96_11225 PF04060 Putative Fe-S cluster HPJ96_11230 PF02508 Rnf-Nqr subunit, membrane protein HPJ96_11235 PF02508 Rnf-Nqr subunit, membrane protein HPJ96_11245 PF03116 NQR2, RnfD, RnfE family HPJ96_11250 PF13237 4Fe-4S dicluster domain HPJ96_11250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HPJ96_11250 PF13375 RnfC Barrel sandwich hybrid domain HPJ96_11250 PF10531 SLBB domain HPJ96_11270 PF12706 Beta-lactamase superfamily domain HPJ96_11280 PF02618 YceG-like family HPJ96_11285 PF08275 DNA primase catalytic core, N-terminal domain HPJ96_11285 PF01807 CHC2 zinc finger HPJ96_11290 PF04545 Sigma-70, region 4 HPJ96_11290 PF03979 Sigma-70 factor, region 1.1 HPJ96_11290 PF00140 Sigma-70 factor, region 1.2 HPJ96_11290 PF04542 Sigma-70 region 2 HPJ96_11290 PF04539 Sigma-70 region 3 HPJ96_11325 PF00905 Penicillin binding protein transpeptidase domain HPJ96_11325 PF03717 Penicillin-binding Protein dimerisation domain HPJ96_11330 PF01098 Cell cycle protein HPJ96_11335 PF00588 SpoU rRNA Methylase family HPJ96_11335 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPJ96_11345 PF00266 Aminotransferase class-V HPJ96_11360 PF02769 AIR synthase related protein, C-terminal domain HPJ96_11360 PF00586 AIR synthase related protein, N-terminal domain HPJ96_11365 PF13478 XdhC Rossmann domain HPJ96_11365 PF02625 XdhC and CoxI family HPJ96_11370 PF12804 MobA-like NTP transferase domain HPJ96_11380 PF00005 ABC transporter HPJ96_11385 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_11400 PF00994 Probable molybdopterin binding domain HPJ96_11410 PF06463 Molybdenum Cofactor Synthesis C HPJ96_11410 PF04055 Radical SAM superfamily HPJ96_11415 PF01967 MoaC family HPJ96_11420 PF00994 Probable molybdopterin binding domain HPJ96_11420 PF02464 Competence-damaged protein HPJ96_11425 PF13478 XdhC Rossmann domain HPJ96_11425 PF02625 XdhC and CoxI family HPJ96_11430 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HPJ96_11430 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HPJ96_11435 PF00860 Permease family HPJ96_11440 PF01979 Amidohydrolase family HPJ96_11445 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPJ96_11445 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPJ96_11450 PF00291 Pyridoxal-phosphate dependent enzyme HPJ96_11455 PF01546 Peptidase family M20/M25/M40 HPJ96_11455 PF07687 Peptidase dimerisation domain HPJ96_11460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPJ96_11460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPJ96_11470 PF01979 Amidohydrolase family HPJ96_11475 PF13941 MutL protein HPJ96_11480 PF04961 Formiminotransferase-cyclodeaminase HPJ96_11485 PF01268 Formate--tetrahydrofolate ligase HPJ96_11490 PF07837 Formiminotransferase domain, N-terminal subdomain HPJ96_11490 PF02971 Formiminotransferase domain HPJ96_11495 PF00221 Aromatic amino acid lyase HPJ96_11500 PF13726 Na+-H+ antiporter family HPJ96_11500 PF03553 Na+/H+ antiporter family HPJ96_11510 PF02780 Transketolase, C-terminal domain HPJ96_11510 PF02779 Transketolase, pyrimidine binding domain HPJ96_11510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HPJ96_11515 PF00809 Pterin binding enzyme HPJ96_11520 PF02457 DisA bacterial checkpoint controller nucleotide-binding HPJ96_11530 PF01648 4'-phosphopantetheinyl transferase superfamily HPJ96_11535 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) HPJ96_11540 PF01416 tRNA pseudouridine synthase HPJ96_11545 PF08323 Starch synthase catalytic domain HPJ96_11545 PF00534 Glycosyl transferases group 1 HPJ96_11555 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HPJ96_11555 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HPJ96_11560 PF00378 Enoyl-CoA hydratase/isomerase HPJ96_11565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPJ96_11565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPJ96_11570 PF00258 Flavodoxin HPJ96_11570 PF00753 Metallo-beta-lactamase superfamily HPJ96_11575 PF02770 Acyl-CoA dehydrogenase, middle domain HPJ96_11575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPJ96_11575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPJ96_11580 PF00108 Thiolase, N-terminal domain HPJ96_11580 PF02803 Thiolase, C-terminal domain HPJ96_11590 PF02378 Phosphotransferase system, EIIC HPJ96_11590 PF00367 phosphotransferase system, EIIB HPJ96_11595 PF13580 SIS domain HPJ96_11600 PF03372 Endonuclease/Exonuclease/phosphatase family HPJ96_11610 PF02229 Transcriptional Coactivator p15 (PC4) HPJ96_11615 PF00075 RNase H HPJ96_11620 PF00664 ABC transporter transmembrane region HPJ96_11620 PF00005 ABC transporter HPJ96_11625 PF00005 ABC transporter HPJ96_11625 PF00664 ABC transporter transmembrane region HPJ96_11630 PF02322 Cytochrome bd terminal oxidase subunit II HPJ96_11635 PF01654 Cytochrome bd terminal oxidase subunit I HPJ96_11640 PF07859 alpha/beta hydrolase fold HPJ96_11660 PF00113 Enolase, C-terminal TIM barrel domain HPJ96_11660 PF03952 Enolase, N-terminal domain HPJ96_11700 PF01588 Putative tRNA binding domain HPJ96_11705 PF03023 Lipid II flippase MurJ HPJ96_11715 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPJ96_11715 PF04324 BFD-like [2Fe-2S] binding domain HPJ96_11720 PF01266 FAD dependent oxidoreductase HPJ96_11725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HPJ96_11725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HPJ96_11730 PF00230 Major intrinsic protein HPJ96_11735 PF13393 Histidyl-tRNA synthetase HPJ96_11740 PF02637 GatB domain HPJ96_11740 PF02934 GatB/GatE catalytic domain HPJ96_11745 PF01425 Amidase HPJ96_11760 PF00005 ABC transporter HPJ96_11780 PF03773 Predicted permease HPJ96_11790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HPJ96_11790 PF14572 Phosphoribosyl synthetase-associated domain HPJ96_11820 PF12399 Branched-chain amino acid ATP-binding cassette transporter HPJ96_11820 PF00005 ABC transporter HPJ96_11825 PF00005 ABC transporter HPJ96_11825 PF00664 ABC transporter transmembrane region HPJ96_11830 PF00005 ABC transporter HPJ96_11830 PF00664 ABC transporter transmembrane region HPJ96_11835 PF07171 MlrC C-terminus HPJ96_11835 PF07364 Metallopeptidase family M81 HPJ96_11840 PF03932 CutC family HPJ96_11845 PF00857 Isochorismatase family HPJ96_11895 PF00092 von Willebrand factor type A domain HPJ96_11905 PF01882 Protein of unknown function DUF58 HPJ96_11915 PF00534 Glycosyl transferases group 1 HPJ96_11915 PF08323 Starch synthase catalytic domain HPJ96_11965 PF04298 Putative neutral zinc metallopeptidase HPJ96_11995 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPJ96_11995 PF17864 RuvB AAA lid domain HPJ96_11995 PF05491 RuvB C-terminal winged helix domain HPJ96_12000 PF02547 Queuosine biosynthesis protein HPJ96_12010 PF02127 Aminopeptidase I zinc metalloprotease (M18) HPJ96_12020 PF13742 OB-fold nucleic acid binding domain HPJ96_12020 PF02601 Exonuclease VII, large subunit HPJ96_12040 PF02028 BCCT, betaine/carnitine/choline family transporter HPJ96_12045 PF12804 MobA-like NTP transferase domain HPJ96_12050 PF01430 Hsp33 protein HPJ96_12065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_12080 PF01926 50S ribosome-binding GTPase HPJ96_12085 PF00583 Acetyltransferase (GNAT) family HPJ96_12085 PF00814 Glycoprotease family HPJ96_12090 PF04474 Protein of unknown function (DUF554) HPJ96_12105 PF02417 Chromate transporter HPJ96_12120 PF07724 AAA domain (Cdc48 subfamily) HPJ96_12120 PF17871 AAA lid domain HPJ96_12120 PF02861 Clp amino terminal domain, pathogenicity island component HPJ96_12120 PF10431 C-terminal, D2-small domain, of ClpB protein HPJ96_12120 PF00004 ATPase family associated with various cellular activities (AAA) HPJ96_12125 PF02075 Crossover junction endodeoxyribonuclease RuvC HPJ96_12130 PF00171 Aldehyde dehydrogenase family HPJ96_12140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPJ96_12140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPJ96_12160 PF00005 ABC transporter HPJ96_12165 PF12683 Protein of unknown function (DUF3798) HPJ96_12175 PF01330 RuvA N terminal domain HPJ96_12180 PF01636 Phosphotransferase enzyme family HPJ96_12190 PF02683 Cytochrome C biogenesis protein transmembrane region HPJ96_12195 PF00578 AhpC/TSA family HPJ96_12205 PF01609 Transposase DDE domain HPJ96_12205 PF05598 Transposase domain (DUF772) HPJ96_12220 PF00381 PTS HPr component phosphorylation site HPJ96_12225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPJ96_12225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPJ96_12230 PF00294 pfkB family carbohydrate kinase HPJ96_12235 PF08220 DeoR-like helix-turn-helix domain HPJ96_12235 PF00455 DeoR C terminal sensor domain HPJ96_12240 PF00578 AhpC/TSA family HPJ96_12255 PF01915 Glycosyl hydrolase family 3 C-terminal domain HPJ96_12255 PF00933 Glycosyl hydrolase family 3 N terminal domain HPJ96_12260 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPJ96_12285 PF00005 ABC transporter HPJ96_12285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPJ96_12290 PF00005 ABC transporter HPJ96_12290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPJ96_12300 PF00664 ABC transporter transmembrane region HPJ96_12300 PF00005 ABC transporter HPJ96_12305 PF00664 ABC transporter transmembrane region HPJ96_12305 PF00005 ABC transporter HPJ96_12310 PF00664 ABC transporter transmembrane region HPJ96_12310 PF00005 ABC transporter HPJ96_12315 PF00664 ABC transporter transmembrane region HPJ96_12315 PF00005 ABC transporter HPJ96_12325 PF07478 D-ala D-ala ligase C-terminus HPJ96_12325 PF01820 D-ala D-ala ligase N-terminus HPJ96_12330 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HPJ96_12330 PF03484 tRNA synthetase B5 domain HPJ96_12350 PF00210 Ferritin-like domain HPJ96_12355 PF03824 High-affinity nickel-transport protein HPJ96_12360 PF01925 Sulfite exporter TauE/SafE HPJ96_12370 PF13276 HTH-like domain HPJ96_12370 PF00665 Integrase core domain HPJ96_12370 PF13333 Integrase core domain HPJ96_12380 PF03009 Glycerophosphoryl diester phosphodiesterase family HPJ96_12385 PF02779 Transketolase, pyrimidine binding domain HPJ96_12385 PF02780 Transketolase, C-terminal domain HPJ96_12390 PF00456 Transketolase, thiamine diphosphate binding domain HPJ96_12395 PF03611 PTS system sugar-specific permease component HPJ96_12410 PF00005 ABC transporter HPJ96_12415 PF02632 BioY family HPJ96_12420 PF01926 50S ribosome-binding GTPase HPJ96_12420 PF06071 Protein of unknown function (DUF933) HPJ96_12425 PF00365 Phosphofructokinase HPJ96_12435 PF08402 TOBE domain HPJ96_12435 PF00005 ABC transporter HPJ96_12445 PF01547 Bacterial extracellular solute-binding protein HPJ96_12455 PF02424 ApbE family HPJ96_12510 PF13808 DDE_Tnp_1-associated HPJ96_12510 PF01609 Transposase DDE domain HPJ96_12520 PF01555 DNA methylase HPJ96_12640 PF00717 Peptidase S24-like HPJ96_12640 PF01726 LexA DNA binding domain HPJ96_12740 PF01171 PP-loop family HPJ96_12740 PF00958 GMP synthase C terminal domain HPJ96_12740 PF00117 Glutamine amidotransferase class-I HPJ96_12750 PF07715 TonB-dependent Receptor Plug Domain HPJ96_12750 PF00593 TonB dependent receptor HPJ96_12785 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_12790 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_12795 PF02056 Family 4 glycosyl hydrolase HPJ96_12795 PF11975 Family 4 glycosyl hydrolase C-terminal domain HPJ96_12830 PF02733 Dak1 domain HPJ96_12835 PF02734 DAK2 domain HPJ96_12840 PF00381 PTS HPr component phosphorylation site HPJ96_12840 PF00391 PEP-utilising enzyme, mobile domain HPJ96_12840 PF05524 PEP-utilising enzyme, N-terminal HPJ96_12840 PF03610 PTS system fructose IIA component HPJ96_12845 PF00773 RNB domain HPJ96_12865 PF00005 ABC transporter HPJ96_12885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPJ96_12895 PF01799 [2Fe-2S] binding domain HPJ96_12895 PF00111 2Fe-2S iron-sulfur cluster binding domain HPJ96_12895 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HPJ96_12895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HPJ96_12905 PF00753 Metallo-beta-lactamase superfamily HPJ96_12905 PF12706 Beta-lactamase superfamily domain HPJ96_12910 PF04055 Radical SAM superfamily HPJ96_12910 PF00919 Uncharacterized protein family UPF0004 HPJ96_12910 PF18693 TRAM domain HPJ96_12925 PF01636 Phosphotransferase enzyme family HPJ96_12935 PF00210 Ferritin-like domain HPJ96_12945 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HPJ96_12945 PF01871 AMMECR1 HPJ96_12950 PF00501 AMP-binding enzyme HPJ96_12955 PF07722 Peptidase C26 HPJ96_12960 PF02056 Family 4 glycosyl hydrolase HPJ96_12960 PF11975 Family 4 glycosyl hydrolase C-terminal domain HPJ96_12980 PF00892 EamA-like transporter family HPJ96_12990 PF01709 Transcriptional regulator HPJ96_13000 PF02769 AIR synthase related protein, C-terminal domain HPJ96_13000 PF00586 AIR synthase related protein, N-terminal domain HPJ96_13005 PF00551 Formyl transferase HPJ96_13010 PF00672 HAMP domain HPJ96_13010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_13010 PF12729 Four helix bundle sensory module for signal transduction HPJ96_13025 PF08402 TOBE domain HPJ96_13025 PF00005 ABC transporter HPJ96_13030 PF00528 Binding-protein-dependent transport system inner membrane component HPJ96_13035 PF00005 ABC transporter HPJ96_13035 PF08402 TOBE domain HPJ96_13040 PF00953 Glycosyl transferase family 4 HPJ96_13045 PF00899 ThiF family HPJ96_13070 PF00248 Aldo/keto reductase family HPJ96_13110 PF00919 Uncharacterized protein family UPF0004 HPJ96_13110 PF01938 TRAM domain HPJ96_13110 PF04055 Radical SAM superfamily HPJ96_13145 PF03063 Prismane/CO dehydrogenase family HPJ96_13160 PF02837 Glycosyl hydrolases family 2, sugar binding domain HPJ96_13160 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HPJ96_13160 PF00703 Glycosyl hydrolases family 2 HPJ96_13160 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 HPJ96_13175 PF00476 DNA polymerase family A HPJ96_13175 PF01612 3'-5' exonuclease HPJ96_13175 PF01367 5'-3' exonuclease, C-terminal SAM fold HPJ96_13175 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPJ96_13185 PF00483 Nucleotidyl transferase HPJ96_13190 PF00343 Carbohydrate phosphorylase HPJ96_13195 PF00596 Class II Aldolase and Adducin N-terminal domain HPJ96_13200 PF00107 Zinc-binding dehydrogenase HPJ96_13200 PF08240 Alcohol dehydrogenase GroES-like domain HPJ96_13205 PF08220 DeoR-like helix-turn-helix domain HPJ96_13205 PF00455 DeoR C terminal sensor domain HPJ96_13210 PF02378 Phosphotransferase system, EIIC HPJ96_13210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPJ96_13210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPJ96_13215 PF01139 tRNA-splicing ligase RtcB HPJ96_13220 PF08439 Oligopeptidase F HPJ96_13220 PF01432 Peptidase family M3 HPJ96_13235 PF00672 HAMP domain HPJ96_13235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPJ96_13235 PF02743 Cache domain HPJ96_13245 PF00152 tRNA synthetases class II (D, K and N) HPJ96_13265 PF03963 Flagellar hook capping protein - N-terminal region HPJ96_13270 PF00460 Flagella basal body rod protein HPJ96_13270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPJ96_13270 PF07559 Flagellar basal body protein FlaE HPJ96_13280 PF01618 MotA/TolQ/ExbB proton channel family HPJ96_13285 PF00691 OmpA family HPJ96_13285 PF13677 Membrane MotB of proton-channel complex MotA/MotB HPJ96_13290 PF03748 Flagellar basal body-associated protein FliL HPJ96_13295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPJ96_13295 PF02154 Flagellar motor switch protein FliM HPJ96_13300 PF04509 CheC-like family HPJ96_13300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPJ96_13310 PF00813 FliP family HPJ96_13315 PF01313 Bacterial export proteins, family 3 HPJ96_13320 PF01311 Bacterial export proteins, family 1 HPJ96_13325 PF01312 FlhB HrpN YscU SpaS Family HPJ96_13330 PF00771 FHIPEP family HPJ96_13335 PF00448 SRP54-type protein, GTPase domain HPJ96_13340 PF10609 NUBPL iron-transfer P-loop NTPase HPJ96_13345 PF00072 Response regulator receiver domain HPJ96_13350 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HPJ96_13355 PF01238 Phosphomannose isomerase type I HPJ96_13360 PF05164 Cell division protein ZapA HPJ96_13370 PF00453 Ribosomal protein L20 HPJ96_13375 PF01632 Ribosomal protein L35 HPJ96_13380 PF05198 Translation initiation factor IF-3, N-terminal domain HPJ96_13380 PF00707 Translation initiation factor IF-3, C-terminal domain HPJ96_13385 PF00595 PDZ domain HPJ96_13390 PF01351 Ribonuclease HII HPJ96_13405 PF01121 Dephospho-CoA kinase HPJ96_13410 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HPJ96_13415 PF01487 Type I 3-dehydroquinase HPJ96_13415 PF08501 Shikimate dehydrogenase substrate binding domain HPJ96_13415 PF01488 Shikimate / quinate 5-dehydrogenase HPJ96_13430 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HPJ96_13430 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HPJ96_13430 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HPJ96_13440 PF03462 PCRF domain HPJ96_13440 PF00472 RF-1 domain HPJ96_13445 PF01476 LysM domain HPJ96_13445 PF01551 Peptidase family M23 HPJ96_13445 PF08525 Opacity-associated protein A N-terminal motif HPJ96_13460 PF04468 PSP1 C-terminal conserved region HPJ96_13465 PF00962 Adenosine/AMP deaminase HPJ96_13490 PF01966 HD domain HPJ96_13495 PF06397 Desulfoferrodoxin, N-terminal domain HPJ96_13495 PF01880 Desulfoferrodoxin HPJ96_13500 PF04972 BON domain HPJ96_13500 PF01476 LysM domain HPJ96_13510 PF00009 Elongation factor Tu GTP binding domain HPJ96_13510 PF03144 Elongation factor Tu domain 2 HPJ96_13510 PF03143 Elongation factor Tu C-terminal domain HPJ96_13515 PF00338 Ribosomal protein S10p/S20e HPJ96_13520 PF00297 Ribosomal protein L3 HPJ96_13525 PF00573 Ribosomal protein L4/L1 family HPJ96_13530 PF00276 Ribosomal protein L23 HPJ96_13535 PF00181 Ribosomal Proteins L2, RNA binding domain HPJ96_13535 PF03947 Ribosomal Proteins L2, C-terminal domain HPJ96_13540 PF00203 Ribosomal protein S19 HPJ96_13545 PF00237 Ribosomal protein L22p/L17e HPJ96_13550 PF00189 Ribosomal protein S3, C-terminal domain HPJ96_13550 PF07650 KH domain HPJ96_13555 PF00252 Ribosomal protein L16p/L10e HPJ96_13560 PF00831 Ribosomal L29 protein HPJ96_13565 PF00366 Ribosomal protein S17 HPJ96_13570 PF00238 Ribosomal protein L14p/L23e HPJ96_13575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HPJ96_13575 PF00467 KOW motif HPJ96_13580 PF00281 Ribosomal protein L5 HPJ96_13580 PF00673 ribosomal L5P family C-terminus HPJ96_13585 PF00253 Ribosomal protein S14p/S29e HPJ96_13590 PF00410 Ribosomal protein S8 HPJ96_13595 PF00347 Ribosomal protein L6 HPJ96_13600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HPJ96_13605 PF00333 Ribosomal protein S5, N-terminal domain HPJ96_13605 PF03719 Ribosomal protein S5, C-terminal domain HPJ96_13610 PF00327 Ribosomal protein L30p/L7e HPJ96_13615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HPJ96_13620 PF00344 SecY translocase HPJ96_13625 PF00444 Ribosomal protein L36 HPJ96_13630 PF00416 Ribosomal protein S13/S18 HPJ96_13635 PF00411 Ribosomal protein S11 HPJ96_13640 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HPJ96_13640 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HPJ96_13640 PF01000 RNA polymerase Rpb3/RpoA insert domain HPJ96_13645 PF01196 Ribosomal protein L17 HPJ96_13670 PF02472 Biopolymer transport protein ExbD/TolR HPJ96_13675 PF01618 MotA/TolQ/ExbB proton channel family HPJ96_13680 PF03781 Sulfatase-modifying factor enzyme 1 HPJ96_13680 PF00069 Protein kinase domain HPJ96_13700 PF02653 Branched-chain amino acid transport system / permease component HPJ96_13705 PF02653 Branched-chain amino acid transport system / permease component HPJ96_13710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HPJ96_13730 PF00005 ABC transporter HPJ96_13735 PF01458 Uncharacterized protein family (UPF0051) HPJ96_13740 PF01458 Uncharacterized protein family (UPF0051) HPJ96_13745 PF00266 Aminotransferase class-V HPJ96_13750 PF01592 NifU-like N terminal domain HPJ96_13760 PF00491 Arginase family HPJ96_13770 PF17755 UvrA DNA-binding domain HPJ96_13770 PF00005 ABC transporter HPJ96_13770 PF17760 UvrA interaction domain HPJ96_13780 PF01027 Inhibitor of apoptosis-promoting Bax1 HPJ96_13790 PF13167 GTP-binding GTPase N-terminal HPJ96_13790 PF01926 50S ribosome-binding GTPase HPJ96_13790 PF16360 GTP-binding GTPase Middle Region HPJ96_13800 PF00533 BRCA1 C Terminus (BRCT) domain HPJ96_13800 PF01653 NAD-dependent DNA ligase adenylation domain HPJ96_13800 PF03120 NAD-dependent DNA ligase OB-fold domain HPJ96_13810 PF00005 ABC transporter HPJ96_13815 PF02361 Cobalt transport protein HPJ96_13820 PF00440 Bacterial regulatory proteins, tetR family HPJ96_13820 PF08361 MAATS-type transcriptional repressor, C-terminal region HPJ96_13825 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPJ96_13825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPJ96_13830 PF01022 Bacterial regulatory protein, arsR family HPJ96_13835 PF01661 Macro domain HPJ96_13850 PF02926 THUMP domain HPJ96_13850 PF01170 Putative RNA methylase family UPF0020 HPJ96_13855 PF03591 AzlC protein HPJ96_13860 PF05437 Branched-chain amino acid transport protein (AzlD)