locus-tag class description DWQ65_00015 PF01136 Peptidase family U32 DWQ65_00015 PF16325 Peptidase family U32 C-terminal domain DWQ65_00020 PF01411 tRNA synthetases class II (A) DWQ65_00020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DWQ65_00025 PF13145 PPIC-type PPIASE domain DWQ65_00030 PF01029 NusB family DWQ65_00050 PF00162 Phosphoglycerate kinase DWQ65_00055 PF00121 Triosephosphate isomerase DWQ65_00075 PF01791 DeoC/LacD family aldolase DWQ65_00080 PF00300 Histidine phosphatase superfamily (branch 1) DWQ65_00100 PF01613 Flavin reductase like domain DWQ65_00105 PF13411 MerR HTH family regulatory protein DWQ65_00130 PF17941 Polyphosphate kinase C-terminal domain 1 DWQ65_00130 PF13090 Polyphosphate kinase C-terminal domain 2 DWQ65_00130 PF02503 Polyphosphate kinase middle domain DWQ65_00130 PF13089 Polyphosphate kinase N-terminal domain DWQ65_00135 PF03616 Sodium/glutamate symporter DWQ65_00145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DWQ65_00145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DWQ65_00155 PF00072 Response regulator receiver domain DWQ65_00155 PF00196 Bacterial regulatory proteins, luxR family DWQ65_00160 PF01706 FliG C-terminal domain DWQ65_00160 PF14841 FliG middle domain DWQ65_00160 PF14842 FliG N-terminal domain DWQ65_00165 PF08367 Peptidase M16C associated DWQ65_00165 PF00675 Insulinase (Peptidase family M16) DWQ65_00165 PF05193 Peptidase M16 inactive domain DWQ65_00175 PF13344 Haloacid dehalogenase-like hydrolase DWQ65_00180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DWQ65_00190 PF03480 Bacterial extracellular solute-binding protein, family 7 DWQ65_00210 PF00970 Oxidoreductase FAD-binding domain DWQ65_00210 PF00175 Oxidoreductase NAD-binding domain DWQ65_00210 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DWQ65_00215 PF01180 Dihydroorotate dehydrogenase DWQ65_00220 PF00156 Phosphoribosyl transferase domain DWQ65_00230 PF06733 DEAD_2 DWQ65_00230 PF13307 Helicase C-terminal domain DWQ65_00235 PF01168 Alanine racemase, N-terminal domain DWQ65_00235 PF00842 Alanine racemase, C-terminal domain DWQ65_00260 PF01207 Dihydrouridine synthase (Dus) DWQ65_00265 PF00456 Transketolase, thiamine diphosphate binding domain DWQ65_00265 PF02779 Transketolase, pyrimidine binding domain DWQ65_00270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_00285 PF01470 Pyroglutamyl peptidase DWQ65_00300 PF00557 Metallopeptidase family M24 DWQ65_00305 PF01556 DnaJ C terminal domain DWQ65_00305 PF00226 DnaJ domain DWQ65_00335 PF07238 PilZ domain DWQ65_00345 PF14492 Elongation Factor G, domain II DWQ65_00345 PF00679 Elongation factor G C-terminus DWQ65_00345 PF03764 Elongation factor G, domain IV DWQ65_00345 PF00009 Elongation factor Tu GTP binding domain DWQ65_00345 PF03144 Elongation factor Tu domain 2 DWQ65_00355 PF01321 Creatinase/Prolidase N-terminal domain DWQ65_00355 PF00557 Metallopeptidase family M24 DWQ65_00360 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DWQ65_00370 PF01926 50S ribosome-binding GTPase DWQ65_00370 PF07650 KH domain DWQ65_00375 PF00037 4Fe-4S binding domain DWQ65_00375 PF13187 4Fe-4S dicluster domain DWQ65_00375 PF04060 Putative Fe-S cluster DWQ65_00380 PF02508 Rnf-Nqr subunit, membrane protein DWQ65_00385 PF02508 Rnf-Nqr subunit, membrane protein DWQ65_00395 PF03116 NQR2, RnfD, RnfE family DWQ65_00400 PF13375 RnfC Barrel sandwich hybrid domain DWQ65_00400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DWQ65_00400 PF13237 4Fe-4S dicluster domain DWQ65_00400 PF10531 SLBB domain DWQ65_00420 PF12706 Beta-lactamase superfamily domain DWQ65_00430 PF02618 YceG-like family DWQ65_00435 PF08275 DNA primase catalytic core, N-terminal domain DWQ65_00435 PF01807 CHC2 zinc finger DWQ65_00440 PF03979 Sigma-70 factor, region 1.1 DWQ65_00440 PF00140 Sigma-70 factor, region 1.2 DWQ65_00440 PF04545 Sigma-70, region 4 DWQ65_00440 PF04539 Sigma-70 region 3 DWQ65_00440 PF04542 Sigma-70 region 2 DWQ65_00475 PF00905 Penicillin binding protein transpeptidase domain DWQ65_00475 PF03717 Penicillin-binding Protein dimerisation domain DWQ65_00480 PF01098 Cell cycle protein DWQ65_00485 PF00588 SpoU rRNA Methylase family DWQ65_00485 PF08032 RNA 2'-O ribose methyltransferase substrate binding DWQ65_00495 PF00266 Aminotransferase class-V DWQ65_00510 PF02769 AIR synthase related protein, C-terminal domain DWQ65_00510 PF00586 AIR synthase related protein, N-terminal domain DWQ65_00515 PF13478 XdhC Rossmann domain DWQ65_00515 PF02625 XdhC and CoxI family DWQ65_00520 PF12804 MobA-like NTP transferase domain DWQ65_00525 PF00005 ABC transporter DWQ65_00530 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_00545 PF00994 Probable molybdopterin binding domain DWQ65_00555 PF06463 Molybdenum Cofactor Synthesis C DWQ65_00555 PF04055 Radical SAM superfamily DWQ65_00560 PF01967 MoaC family DWQ65_00565 PF02464 Competence-damaged protein DWQ65_00565 PF00994 Probable molybdopterin binding domain DWQ65_00570 PF13478 XdhC Rossmann domain DWQ65_00570 PF02625 XdhC and CoxI family DWQ65_00575 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DWQ65_00575 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DWQ65_00580 PF00860 Permease family DWQ65_00590 PF01979 Amidohydrolase family DWQ65_00595 PF07992 Pyridine nucleotide-disulphide oxidoreductase DWQ65_00595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DWQ65_00600 PF00291 Pyridoxal-phosphate dependent enzyme DWQ65_00605 PF01546 Peptidase family M20/M25/M40 DWQ65_00605 PF07687 Peptidase dimerisation domain DWQ65_00610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DWQ65_00610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DWQ65_00620 PF01979 Amidohydrolase family DWQ65_00625 PF13941 MutL protein DWQ65_00630 PF04961 Formiminotransferase-cyclodeaminase DWQ65_00635 PF01268 Formate--tetrahydrofolate ligase DWQ65_00640 PF02971 Formiminotransferase domain DWQ65_00640 PF07837 Formiminotransferase domain, N-terminal subdomain DWQ65_00645 PF00221 Aromatic amino acid lyase DWQ65_00650 PF13726 Na+-H+ antiporter family DWQ65_00650 PF03553 Na+/H+ antiporter family DWQ65_00655 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DWQ65_00655 PF02779 Transketolase, pyrimidine binding domain DWQ65_00655 PF02780 Transketolase, C-terminal domain DWQ65_00660 PF00809 Pterin binding enzyme DWQ65_00665 PF02457 DisA bacterial checkpoint controller nucleotide-binding DWQ65_00675 PF01648 4'-phosphopantetheinyl transferase superfamily DWQ65_00680 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) DWQ65_00685 PF01416 tRNA pseudouridine synthase DWQ65_00690 PF08323 Starch synthase catalytic domain DWQ65_00690 PF00534 Glycosyl transferases group 1 DWQ65_00705 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DWQ65_00705 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DWQ65_00710 PF00378 Enoyl-CoA hydratase/isomerase DWQ65_00715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DWQ65_00715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DWQ65_00720 PF00258 Flavodoxin DWQ65_00720 PF00753 Metallo-beta-lactamase superfamily DWQ65_00725 PF02770 Acyl-CoA dehydrogenase, middle domain DWQ65_00725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DWQ65_00725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DWQ65_00730 PF02803 Thiolase, C-terminal domain DWQ65_00730 PF00108 Thiolase, N-terminal domain DWQ65_00745 PF00118 TCP-1/cpn60 chaperonin family DWQ65_00750 PF13291 ACT domain DWQ65_00750 PF04607 Region found in RelA / SpoT proteins DWQ65_00750 PF02824 TGS domain DWQ65_00755 PF17827 PrmC N-terminal domain DWQ65_00755 PF05175 Methyltransferase small domain DWQ65_00760 PF00501 AMP-binding enzyme DWQ65_00770 PF02742 Iron dependent repressor, metal binding and dimerisation domain DWQ65_00770 PF01325 Iron dependent repressor, N-terminal DNA binding domain DWQ65_00770 PF18357 Diphteria toxin repressor SH3 domain DWQ65_00775 PF00950 ABC 3 transport family DWQ65_00780 PF00950 ABC 3 transport family DWQ65_00785 PF00005 ABC transporter DWQ65_00790 PF01297 Zinc-uptake complex component A periplasmic DWQ65_00815 PF01425 Amidase DWQ65_00820 PF02934 GatB/GatE catalytic domain DWQ65_00820 PF02637 GatB domain DWQ65_00825 PF13393 Histidyl-tRNA synthetase DWQ65_00835 PF00230 Major intrinsic protein DWQ65_00840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DWQ65_00840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DWQ65_00845 PF01266 FAD dependent oxidoreductase DWQ65_00850 PF07992 Pyridine nucleotide-disulphide oxidoreductase DWQ65_00850 PF04324 BFD-like [2Fe-2S] binding domain DWQ65_00860 PF03023 Lipid II flippase MurJ DWQ65_00865 PF01588 Putative tRNA binding domain DWQ65_00920 PF03952 Enolase, N-terminal domain DWQ65_00920 PF00113 Enolase, C-terminal TIM barrel domain DWQ65_00940 PF07859 alpha/beta hydrolase fold DWQ65_00945 PF01654 Cytochrome bd terminal oxidase subunit I DWQ65_00950 PF02322 Cytochrome bd terminal oxidase subunit II DWQ65_00955 PF00664 ABC transporter transmembrane region DWQ65_00955 PF00005 ABC transporter DWQ65_00960 PF00664 ABC transporter transmembrane region DWQ65_00960 PF00005 ABC transporter DWQ65_00965 PF00075 RNase H DWQ65_00970 PF02229 Transcriptional Coactivator p15 (PC4) DWQ65_00980 PF03372 Endonuclease/Exonuclease/phosphatase family DWQ65_00985 PF13580 SIS domain DWQ65_00990 PF02378 Phosphotransferase system, EIIC DWQ65_00990 PF00367 phosphotransferase system, EIIB DWQ65_01015 PF13567 Domain of unknown function (DUF4131) DWQ65_01015 PF03772 Competence protein DWQ65_01015 PF00753 Metallo-beta-lactamase superfamily DWQ65_01020 PF00398 Ribosomal RNA adenine dimethylase DWQ65_01030 PF00849 RNA pseudouridylate synthase DWQ65_01035 PF00849 RNA pseudouridylate synthase DWQ65_01040 PF02875 Mur ligase family, glutamate ligase domain DWQ65_01040 PF08245 Mur ligase middle domain DWQ65_01045 PF04304 Protein of unknown function (DUF454) DWQ65_01050 PF03309 Type III pantothenate kinase DWQ65_01065 PF01813 ATP synthase subunit D DWQ65_01070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DWQ65_01070 PF02874 ATP synthase alpha/beta family, beta-barrel domain DWQ65_01075 PF16886 ATPsynthase alpha/beta subunit N-term extension DWQ65_01075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DWQ65_01075 PF02874 ATP synthase alpha/beta family, beta-barrel domain DWQ65_01085 PF01991 ATP synthase (E/31 kDa) subunit DWQ65_01115 PF04024 PspC domain DWQ65_01145 PF00005 ABC transporter DWQ65_01155 PF00005 ABC transporter DWQ65_01155 PF12704 MacB-like periplasmic core domain DWQ65_01155 PF02687 FtsX-like permease family DWQ65_01170 PF04260 Protein of unknown function (DUF436) DWQ65_01175 PF04260 Protein of unknown function (DUF436) DWQ65_01180 PF00860 Permease family DWQ65_01200 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_01210 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_01220 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DWQ65_01225 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DWQ65_01230 PF01869 BadF/BadG/BcrA/BcrD ATPase family DWQ65_01235 PF03616 Sodium/glutamate symporter DWQ65_01240 PF01039 Carboxyl transferase domain DWQ65_01245 PF01144 Coenzyme A transferase DWQ65_01250 PF01144 Coenzyme A transferase DWQ65_01255 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DWQ65_01260 PF00364 Biotin-requiring enzyme DWQ65_01270 PF03616 Sodium/glutamate symporter DWQ65_01275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DWQ65_01275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DWQ65_01280 PF04408 Helicase associated domain (HA2) DWQ65_01280 PF00270 DEAD/DEAH box helicase DWQ65_01280 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DWQ65_01280 PF00271 Helicase conserved C-terminal domain DWQ65_01290 PF00830 Ribosomal L28 family DWQ65_01305 PF02608 ABC transporter substrate-binding protein PnrA-like DWQ65_01310 PF00005 ABC transporter DWQ65_01315 PF02653 Branched-chain amino acid transport system / permease component DWQ65_01320 PF02653 Branched-chain amino acid transport system / permease component DWQ65_01330 PF04172 LrgB-like family DWQ65_01345 PF00271 Helicase conserved C-terminal domain DWQ65_01345 PF00270 DEAD/DEAH box helicase DWQ65_01345 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DWQ65_01345 PF04408 Helicase associated domain (HA2) DWQ65_01355 PF01116 Fructose-bisphosphate aldolase class-II DWQ65_01365 PF04620 Flagellar filament outer layer protein Flaa DWQ65_01380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DWQ65_01395 PF00391 PEP-utilising enzyme, mobile domain DWQ65_01395 PF05524 PEP-utilising enzyme, N-terminal DWQ65_01395 PF02896 PEP-utilising enzyme, TIM barrel domain DWQ65_01405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DWQ65_01405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DWQ65_01405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DWQ65_01405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DWQ65_01415 PF02355 Protein export membrane protein DWQ65_01420 PF02355 Protein export membrane protein DWQ65_01425 PF02699 Preprotein translocase subunit DWQ65_01430 PF08668 HDOD domain DWQ65_01440 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DWQ65_01445 PF13276 HTH-like domain DWQ65_01445 PF13333 Integrase core domain DWQ65_01445 PF00665 Integrase core domain DWQ65_01450 PF13333 Integrase core domain DWQ65_01450 PF00665 Integrase core domain DWQ65_01460 PF12419 SNF2 Helicase protein DWQ65_01460 PF00271 Helicase conserved C-terminal domain DWQ65_01460 PF00176 SNF2 family N-terminal domain DWQ65_01470 PF06418 CTP synthase N-terminus DWQ65_01470 PF00117 Glutamine amidotransferase class-I DWQ65_01475 PF03553 Na+/H+ antiporter family DWQ65_01490 PF01048 Phosphorylase superfamily DWQ65_01500 PF00497 Bacterial extracellular solute-binding proteins, family 3 DWQ65_01505 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_01510 PF00005 ABC transporter DWQ65_01525 PF02511 Thymidylate synthase complementing protein DWQ65_01535 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_01540 PF01547 Bacterial extracellular solute-binding protein DWQ65_01545 PF01145 SPFH domain / Band 7 family DWQ65_01550 PF01145 SPFH domain / Band 7 family DWQ65_01570 PF00245 Alkaline phosphatase DWQ65_01595 PF00005 ABC transporter DWQ65_01615 PF00005 ABC transporter DWQ65_01615 PF00664 ABC transporter transmembrane region DWQ65_01620 PF00664 ABC transporter transmembrane region DWQ65_01620 PF00005 ABC transporter DWQ65_01640 PF08264 Anticodon-binding domain of tRNA DWQ65_01640 PF00133 tRNA synthetases class I (I, L, M and V) DWQ65_01640 PF10458 Valyl tRNA synthetase tRNA binding arm DWQ65_01655 PF02872 5'-nucleotidase, C-terminal domain DWQ65_01655 PF00149 Calcineurin-like phosphoesterase DWQ65_01665 PF00271 Helicase conserved C-terminal domain DWQ65_01665 PF00270 DEAD/DEAH box helicase DWQ65_01665 PF17191 RecG wedge domain DWQ65_01670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DWQ65_01670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DWQ65_01670 PF03129 Anticodon binding domain DWQ65_01680 PF00072 Response regulator receiver domain DWQ65_01685 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DWQ65_01690 PF01238 Phosphomannose isomerase type I DWQ65_01695 PF05164 Cell division protein ZapA DWQ65_01705 PF00453 Ribosomal protein L20 DWQ65_01710 PF01632 Ribosomal protein L35 DWQ65_01715 PF05198 Translation initiation factor IF-3, N-terminal domain DWQ65_01715 PF00707 Translation initiation factor IF-3, C-terminal domain DWQ65_01720 PF00595 PDZ domain DWQ65_01725 PF01351 Ribonuclease HII DWQ65_01740 PF01121 Dephospho-CoA kinase DWQ65_01745 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DWQ65_01750 PF01487 Type I 3-dehydroquinase DWQ65_01750 PF01488 Shikimate / quinate 5-dehydrogenase DWQ65_01750 PF08501 Shikimate dehydrogenase substrate binding domain DWQ65_01765 PF01914 MarC family integral membrane protein DWQ65_01775 PF00665 Integrase core domain DWQ65_01775 PF13333 Integrase core domain DWQ65_01780 PF13276 HTH-like domain DWQ65_01780 PF00665 Integrase core domain DWQ65_01780 PF13333 Integrase core domain DWQ65_01810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DWQ65_01810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DWQ65_01815 PF02447 GntP family permease DWQ65_01820 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DWQ65_01820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DWQ65_01825 PF01205 Uncharacterized protein family UPF0029 DWQ65_01825 PF09186 Domain of unknown function (DUF1949) DWQ65_01840 PF00692 dUTPase DWQ65_01845 PF03725 3' exoribonuclease family, domain 2 DWQ65_01845 PF00575 S1 RNA binding domain DWQ65_01845 PF00013 KH domain DWQ65_01845 PF01138 3' exoribonuclease family, domain 1 DWQ65_01845 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DWQ65_01850 PF00312 Ribosomal protein S15 DWQ65_01855 PF01687 Riboflavin kinase DWQ65_01855 PF06574 FAD synthetase DWQ65_01860 PF16198 tRNA pseudouridylate synthase B C-terminal domain DWQ65_01860 PF01509 TruB family pseudouridylate synthase (N terminal domain) DWQ65_01865 PF02033 Ribosome-binding factor A DWQ65_01875 PF00009 Elongation factor Tu GTP binding domain DWQ65_01875 PF04760 Translation initiation factor IF-2, N-terminal region DWQ65_01875 PF11987 Translation-initiation factor 2 DWQ65_01880 PF08529 NusA N-terminal domain DWQ65_01880 PF00575 S1 RNA binding domain DWQ65_01880 PF13184 NusA-like KH domain DWQ65_01885 PF17384 RimP C-terminal SH3 domain DWQ65_01885 PF02576 RimP N-terminal domain DWQ65_01895 PF01702 Queuine tRNA-ribosyltransferase DWQ65_01905 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DWQ65_01935 PF00884 Sulfatase DWQ65_01940 PF00884 Sulfatase DWQ65_01955 PF00392 Bacterial regulatory proteins, gntR family DWQ65_01955 PF07729 FCD domain DWQ65_01960 PF00392 Bacterial regulatory proteins, gntR family DWQ65_01960 PF07729 FCD domain DWQ65_01975 PF00248 Aldo/keto reductase family DWQ65_01980 PF03577 Peptidase family C69 DWQ65_01985 PF00005 ABC transporter DWQ65_01985 PF03459 TOBE domain DWQ65_01985 PF17912 MalK OB fold domain DWQ65_01990 PF02872 5'-nucleotidase, C-terminal domain DWQ65_01990 PF00149 Calcineurin-like phosphoesterase DWQ65_02015 PF13654 AAA domain DWQ65_02015 PF05362 Lon protease (S16) C-terminal proteolytic domain DWQ65_02050 PF13932 GidA associated domain DWQ65_02050 PF01134 Glucose inhibited division protein A DWQ65_02055 PF01588 Putative tRNA binding domain DWQ65_02055 PF09334 tRNA synthetases class I (M) DWQ65_02070 PF00266 Aminotransferase class-V DWQ65_02075 PF00881 Nitroreductase family DWQ65_02090 PF13276 HTH-like domain DWQ65_02090 PF00665 Integrase core domain DWQ65_02090 PF13333 Integrase core domain DWQ65_02100 PF04851 Type III restriction enzyme, res subunit DWQ65_02100 PF08774 VRR-NUC domain DWQ65_02105 PF01555 DNA methylase DWQ65_02105 PF18273 Type III R-M EcoP15I C-terminal domain DWQ65_02110 PF01212 Beta-eliminating lyase DWQ65_02115 PF00209 Sodium:neurotransmitter symporter family DWQ65_02120 PF00730 HhH-GPD superfamily base excision DNA repair protein DWQ65_02130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DWQ65_02150 PF01226 Formate/nitrite transporter DWQ65_02155 PF00795 Carbon-nitrogen hydrolase DWQ65_02160 PF00301 Rubredoxin DWQ65_02175 PF01609 Transposase DDE domain DWQ65_02235 PF00436 Single-strand binding protein family DWQ65_02450 PF13274 Protein of unknown function (DUF4065) DWQ65_02465 PF01420 Type I restriction modification DNA specificity domain DWQ65_02470 PF02384 N-6 DNA Methylase DWQ65_02485 PF00672 HAMP domain DWQ65_02485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_02485 PF02743 Cache domain DWQ65_02490 PF13367 PrsW family intramembrane metalloprotease DWQ65_02495 PF02844 Phosphoribosylglycinamide synthetase, N domain DWQ65_02495 PF02843 Phosphoribosylglycinamide synthetase, C domain DWQ65_02495 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DWQ65_02500 PF01808 AICARFT/IMPCHase bienzyme DWQ65_02500 PF02142 MGS-like domain DWQ65_02525 PF03979 Sigma-70 factor, region 1.1 DWQ65_02525 PF04539 Sigma-70 region 3 DWQ65_02525 PF04542 Sigma-70 region 2 DWQ65_02525 PF04545 Sigma-70, region 4 DWQ65_02525 PF00140 Sigma-70 factor, region 1.2 DWQ65_02530 PF13416 Bacterial extracellular solute-binding protein DWQ65_02535 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_02540 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_02545 PF00005 ABC transporter DWQ65_02545 PF08402 TOBE domain DWQ65_02550 PF00753 Metallo-beta-lactamase superfamily DWQ65_02560 PF03880 DbpA RNA binding domain DWQ65_02570 PF00465 Iron-containing alcohol dehydrogenase DWQ65_02580 PF00877 NlpC/P60 family DWQ65_02580 PF01476 LysM domain DWQ65_02585 PF13193 AMP-binding enzyme C-terminal domain DWQ65_02585 PF00501 AMP-binding enzyme DWQ65_02590 PF09335 SNARE associated Golgi protein DWQ65_02595 PF02540 NAD synthase DWQ65_02610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DWQ65_02615 PF02254 TrkA-N domain DWQ65_02615 PF02080 TrkA-C domain DWQ65_02620 PF02386 Cation transport protein DWQ65_02630 PF01555 DNA methylase DWQ65_02640 PF03006 Haemolysin-III related DWQ65_02665 PF00672 HAMP domain DWQ65_02665 PF02743 Cache domain DWQ65_02665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_02670 PF17757 UvrB interaction domain DWQ65_02670 PF00271 Helicase conserved C-terminal domain DWQ65_02670 PF03461 TRCF domain DWQ65_02670 PF02559 CarD-like/TRCF domain DWQ65_02670 PF00270 DEAD/DEAH box helicase DWQ65_02680 PF03448 MgtE intracellular N domain DWQ65_02680 PF00571 CBS domain DWQ65_02680 PF01769 Divalent cation transporter DWQ65_02685 PF03447 Homoserine dehydrogenase, NAD binding domain DWQ65_02685 PF01842 ACT domain DWQ65_02685 PF00742 Homoserine dehydrogenase DWQ65_02690 PF01118 Semialdehyde dehydrogenase, NAD binding domain DWQ65_02690 PF02774 Semialdehyde dehydrogenase, dimerisation domain DWQ65_02695 PF04204 Homoserine O-succinyltransferase DWQ65_02700 PF01053 Cys/Met metabolism PLP-dependent enzyme DWQ65_02705 PF10672 S-adenosylmethionine-dependent methyltransferase DWQ65_02710 PF06971 Putative DNA-binding protein N-terminus DWQ65_02710 PF02629 CoA binding domain DWQ65_02725 PF00163 Ribosomal protein S4/S9 N-terminal domain DWQ65_02725 PF01479 S4 domain DWQ65_02730 PF00005 ABC transporter DWQ65_02730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DWQ65_02735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DWQ65_02735 PF00005 ABC transporter DWQ65_02745 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_02755 PF00268 Ribonucleotide reductase, small chain DWQ65_02760 PF01256 Carbohydrate kinase DWQ65_02760 PF03853 YjeF-related protein N-terminus DWQ65_02775 PF07683 Cobalamin synthesis protein cobW C-terminal domain DWQ65_02775 PF02492 CobW/HypB/UreG, nucleotide-binding domain DWQ65_02780 PF00107 Zinc-binding dehydrogenase DWQ65_02780 PF08240 Alcohol dehydrogenase GroES-like domain DWQ65_02785 PF08220 DeoR-like helix-turn-helix domain DWQ65_02785 PF00455 DeoR C terminal sensor domain DWQ65_02795 PF00294 pfkB family carbohydrate kinase DWQ65_02800 PF01116 Fructose-bisphosphate aldolase class-II DWQ65_02805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DWQ65_02805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DWQ65_02810 PF01979 Amidohydrolase family DWQ65_02845 PF01894 Uncharacterised protein family UPF0047 DWQ65_02855 PF00271 Helicase conserved C-terminal domain DWQ65_02855 PF00270 DEAD/DEAH box helicase DWQ65_02875 PF00005 ABC transporter DWQ65_02885 PF03979 Sigma-70 factor, region 1.1 DWQ65_02885 PF04545 Sigma-70, region 4 DWQ65_02885 PF04539 Sigma-70 region 3 DWQ65_02885 PF04542 Sigma-70 region 2 DWQ65_02885 PF00140 Sigma-70 factor, region 1.2 DWQ65_02890 PF00166 Chaperonin 10 Kd subunit DWQ65_02895 PF00581 Rhodanese-like domain DWQ65_02905 PF00005 ABC transporter DWQ65_02910 PF02653 Branched-chain amino acid transport system / permease component DWQ65_02920 PF01053 Cys/Met metabolism PLP-dependent enzyme DWQ65_02925 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_02930 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_02945 PF12626 Polymerase A arginine-rich C-terminus DWQ65_02945 PF01743 Poly A polymerase head domain DWQ65_02945 PF12627 Probable RNA and SrmB- binding site of polymerase A DWQ65_02950 PF00211 Adenylate and Guanylate cyclase catalytic domain DWQ65_02950 PF00672 HAMP domain DWQ65_02960 PF05872 Bacterial protein of unknown function (DUF853) DWQ65_02980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_02980 PF00672 HAMP domain DWQ65_02980 PF02743 Cache domain DWQ65_02995 PF01609 Transposase DDE domain DWQ65_02995 PF05598 Transposase domain (DUF772) DWQ65_03035 PF00672 HAMP domain DWQ65_03035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_03035 PF02743 Cache domain DWQ65_03040 PF02073 Thermophilic metalloprotease (M29) DWQ65_03045 PF00881 Nitroreductase family DWQ65_03065 PF04055 Radical SAM superfamily DWQ65_03065 PF00919 Uncharacterized protein family UPF0004 DWQ65_03065 PF01938 TRAM domain DWQ65_03070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DWQ65_03070 PF05524 PEP-utilising enzyme, N-terminal DWQ65_03070 PF02896 PEP-utilising enzyme, TIM barrel domain DWQ65_03070 PF00391 PEP-utilising enzyme, mobile domain DWQ65_03070 PF00381 PTS HPr component phosphorylation site DWQ65_03085 PF02608 ABC transporter substrate-binding protein PnrA-like DWQ65_03090 PF00005 ABC transporter DWQ65_03095 PF02653 Branched-chain amino acid transport system / permease component DWQ65_03100 PF02653 Branched-chain amino acid transport system / permease component DWQ65_03105 PF00578 AhpC/TSA family DWQ65_03205 PF00717 Peptidase S24-like DWQ65_03205 PF01726 LexA DNA binding domain DWQ65_03635 PF05025 RbsD / FucU transport protein family DWQ65_03645 PF00258 Flavodoxin DWQ65_03655 PF00471 Ribosomal protein L33 DWQ65_03665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DWQ65_03670 PF02357 Transcription termination factor nusG DWQ65_03670 PF00467 KOW motif DWQ65_03675 PF03946 Ribosomal protein L11, N-terminal domain DWQ65_03675 PF00298 Ribosomal protein L11, RNA binding domain DWQ65_03680 PF00687 Ribosomal protein L1p/L10e family DWQ65_03685 PF00466 Ribosomal protein L10 DWQ65_03690 PF00542 Ribosomal protein L7/L12 C-terminal domain DWQ65_03690 PF16320 Ribosomal protein L7/L12 dimerisation domain DWQ65_03695 PF04560 RNA polymerase Rpb2, domain 7 DWQ65_03695 PF04565 RNA polymerase Rpb2, domain 3 DWQ65_03695 PF00562 RNA polymerase Rpb2, domain 6 DWQ65_03695 PF10385 RNA polymerase beta subunit external 1 domain DWQ65_03695 PF04563 RNA polymerase beta subunit DWQ65_03695 PF04561 RNA polymerase Rpb2, domain 2 DWQ65_03700 PF05000 RNA polymerase Rpb1, domain 4 DWQ65_03700 PF04983 RNA polymerase Rpb1, domain 3 DWQ65_03700 PF00623 RNA polymerase Rpb1, domain 2 DWQ65_03700 PF04997 RNA polymerase Rpb1, domain 1 DWQ65_03700 PF04998 RNA polymerase Rpb1, domain 5 DWQ65_03705 PF01813 ATP synthase subunit D DWQ65_03720 PF01921 tRNA synthetases class I (K) DWQ65_03730 PF01613 Flavin reductase like domain DWQ65_03730 PF00753 Metallo-beta-lactamase superfamily DWQ65_03735 PF13519 von Willebrand factor type A domain DWQ65_03750 PF02896 PEP-utilising enzyme, TIM barrel domain DWQ65_03750 PF00391 PEP-utilising enzyme, mobile domain DWQ65_03760 PF00005 ABC transporter DWQ65_03770 PF00579 tRNA synthetases class I (W and Y) DWQ65_03775 PF01963 TraB family DWQ65_03780 PF04079 Segregation and condensation complex subunit ScpB DWQ65_03785 PF00849 RNA pseudouridylate synthase DWQ65_03785 PF01479 S4 domain DWQ65_03795 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DWQ65_03800 PF00035 Double-stranded RNA binding motif DWQ65_03800 PF14622 Ribonuclease-III-like DWQ65_03805 PF00550 Phosphopantetheine attachment site DWQ65_03810 PF01783 Ribosomal L32p protein family DWQ65_03820 PF05191 Adenylate kinase, active site lid DWQ65_03880 PF00171 Aldehyde dehydrogenase family DWQ65_03885 PF00696 Amino acid kinase family DWQ65_03915 PF00005 ABC transporter DWQ65_03930 PF13520 Amino acid permease DWQ65_03945 PF00574 Clp protease DWQ65_03950 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DWQ65_03950 PF00970 Oxidoreductase FAD-binding domain DWQ65_03950 PF00175 Oxidoreductase NAD-binding domain DWQ65_03955 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DWQ65_03955 PF07992 Pyridine nucleotide-disulphide oxidoreductase DWQ65_03975 PF00072 Response regulator receiver domain DWQ65_03975 PF00196 Bacterial regulatory proteins, luxR family DWQ65_04025 PF07690 Major Facilitator Superfamily DWQ65_04045 PF02384 N-6 DNA Methylase DWQ65_04050 PF01609 Transposase DDE domain DWQ65_04080 PF02086 D12 class N6 adenine-specific DNA methyltransferase DWQ65_04095 PF01209 ubiE/COQ5 methyltransferase family DWQ65_04100 PF05958 tRNA (Uracil-5-)-methyltransferase DWQ65_04110 PF01546 Peptidase family M20/M25/M40 DWQ65_04110 PF07687 Peptidase dimerisation domain DWQ65_04115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DWQ65_04120 PF01368 DHH family DWQ65_04120 PF17768 RecJ OB domain DWQ65_04120 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DWQ65_04120 PF02272 DHHA1 domain DWQ65_04125 PF01476 LysM domain DWQ65_04125 PF08525 Opacity-associated protein A N-terminal motif DWQ65_04125 PF01551 Peptidase family M23 DWQ65_04140 PF00005 ABC transporter DWQ65_04140 PF00664 ABC transporter transmembrane region DWQ65_04145 PF00664 ABC transporter transmembrane region DWQ65_04145 PF00005 ABC transporter DWQ65_04155 PF02190 ATP-dependent protease La (LON) substrate-binding domain DWQ65_04155 PF05362 Lon protease (S16) C-terminal proteolytic domain DWQ65_04155 PF00004 ATPase family associated with various cellular activities (AAA) DWQ65_04165 PF00849 RNA pseudouridylate synthase DWQ65_04165 PF01479 S4 domain DWQ65_04200 PF00005 ABC transporter DWQ65_04200 PF00664 ABC transporter transmembrane region DWQ65_04205 PF08264 Anticodon-binding domain of tRNA DWQ65_04205 PF00133 tRNA synthetases class I (I, L, M and V) DWQ65_04250 PF00171 Aldehyde dehydrogenase family DWQ65_04255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DWQ65_04255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DWQ65_04260 PF02653 Branched-chain amino acid transport system / permease component DWQ65_04265 PF00005 ABC transporter DWQ65_04270 PF13407 Periplasmic binding protein domain DWQ65_04275 PF01261 Xylose isomerase-like TIM barrel DWQ65_04280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DWQ65_04280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DWQ65_04280 PF00205 Thiamine pyrophosphate enzyme, central domain DWQ65_04310 PF02447 GntP family permease DWQ65_04315 PF02595 Glycerate kinase family DWQ65_04320 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus DWQ65_04320 PF05175 Methyltransferase small domain DWQ65_04325 PF02401 LytB protein DWQ65_04330 PF00679 Elongation factor G C-terminus DWQ65_04330 PF00009 Elongation factor Tu GTP binding domain DWQ65_04330 PF03144 Elongation factor Tu domain 2 DWQ65_04330 PF14492 Elongation Factor G, domain II DWQ65_04330 PF03764 Elongation factor G, domain IV DWQ65_04345 PF04452 RNA methyltransferase DWQ65_04375 PF04055 Radical SAM superfamily DWQ65_04385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DWQ65_04385 PF07196 Flagellin hook IN motif DWQ65_04390 PF00669 Bacterial flagellin N-terminal helical region DWQ65_04390 PF08884 Flagellin D3 domain DWQ65_04390 PF00700 Bacterial flagellin C-terminal helical region DWQ65_04395 PF02623 FliW protein DWQ65_04400 PF02599 Global regulator protein family DWQ65_04405 PF12464 Maltose acetyltransferase DWQ65_04405 PF14602 Hexapeptide repeat of succinyl-transferase DWQ65_04410 PF01156 Inosine-uridine preferring nucleoside hydrolase DWQ65_04420 PF03051 Peptidase C1-like family DWQ65_04440 PF14821 Threonine synthase N terminus DWQ65_04440 PF00291 Pyridoxal-phosphate dependent enzyme DWQ65_04460 PF00672 HAMP domain DWQ65_04460 PF01966 HD domain DWQ65_04465 PF00814 Glycoprotease family DWQ65_04470 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DWQ65_04475 PF01541 GIY-YIG catalytic domain DWQ65_04475 PF08459 UvrC Helix-hairpin-helix N-terminal DWQ65_04475 PF02151 UvrB/uvrC motif DWQ65_04490 PF00211 Adenylate and Guanylate cyclase catalytic domain DWQ65_04490 PF00672 HAMP domain DWQ65_04505 PF00691 OmpA family DWQ65_04510 PF01078 Magnesium chelatase, subunit ChlI DWQ65_04510 PF13335 Magnesium chelatase, subunit ChlI C-terminal DWQ65_04520 PF00669 Bacterial flagellin N-terminal helical region DWQ65_04520 PF00700 Bacterial flagellin C-terminal helical region DWQ65_04525 PF00700 Bacterial flagellin C-terminal helical region DWQ65_04525 PF00669 Bacterial flagellin N-terminal helical region DWQ65_04535 PF02465 Flagellar hook-associated protein 2 N-terminus DWQ65_04535 PF07195 Flagellar hook-associated protein 2 C-terminus DWQ65_04560 PF00849 RNA pseudouridylate synthase DWQ65_04560 PF01479 S4 domain DWQ65_04580 PF12848 ABC transporter DWQ65_04580 PF16326 ABC transporter C-terminal domain DWQ65_04580 PF00005 ABC transporter DWQ65_04580 PF12848 ABC transporter DWQ65_04580 PF16326 ABC transporter C-terminal domain DWQ65_04580 PF00005 ABC transporter DWQ65_04590 PF03167 Uracil DNA glycosylase superfamily DWQ65_04595 PF00270 DEAD/DEAH box helicase DWQ65_04595 PF00271 Helicase conserved C-terminal domain DWQ65_04595 PF17764 3′ DNA-binding domain (3′BD) DWQ65_04595 PF18074 Primosomal protein N C-terminal domain DWQ65_04595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DWQ65_04600 PF02719 Polysaccharide biosynthesis protein DWQ65_04615 PF03477 ATP cone domain DWQ65_04625 PF00665 Integrase core domain DWQ65_04625 PF13333 Integrase core domain DWQ65_04630 PF13333 Integrase core domain DWQ65_04630 PF13276 HTH-like domain DWQ65_04630 PF00665 Integrase core domain DWQ65_04640 PF01336 OB-fold nucleic acid binding domain DWQ65_04640 PF00152 tRNA synthetases class II (D, K and N) DWQ65_04645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_04645 PF02743 Cache domain DWQ65_04645 PF00672 HAMP domain DWQ65_04660 PF00364 Biotin-requiring enzyme DWQ65_04660 PF00682 HMGL-like DWQ65_04660 PF02436 Conserved carboxylase domain DWQ65_04665 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DWQ65_04670 PF00497 Bacterial extracellular solute-binding proteins, family 3 DWQ65_04675 PF00497 Bacterial extracellular solute-binding proteins, family 3 DWQ65_04680 PF03793 PASTA domain DWQ65_04685 PF02146 Sir2 family DWQ65_04690 PF04127 DNA / pantothenate metabolism flavoprotein DWQ65_04690 PF02441 Flavoprotein DWQ65_04695 PF18663 Pallilysin beta barrel domain DWQ65_04700 PF00929 Exonuclease DWQ65_04705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DWQ65_04705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DWQ65_04705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DWQ65_04705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DWQ65_04710 PF01812 5-formyltetrahydrofolate cyclo-ligase family DWQ65_04725 PF08011 PD-(D/E)XK nuclease superfamily DWQ65_04725 PF09820 Predicted AAA-ATPase DWQ65_04730 PF00072 Response regulator receiver domain DWQ65_04730 PF00486 Transcriptional regulatory protein, C terminal DWQ65_04780 PF12161 HsdM N-terminal domain DWQ65_04780 PF02384 N-6 DNA Methylase DWQ65_04790 PF00860 Permease family DWQ65_04800 PF03807 NADP oxidoreductase coenzyme F420-dependent DWQ65_04800 PF14748 Pyrroline-5-carboxylate reductase dimerisation DWQ65_04805 PF02661 Fic/DOC family DWQ65_04805 PF12728 Helix-turn-helix domain DWQ65_04825 PF09285 Elongation factor P, C-terminal DWQ65_04825 PF08207 Elongation factor P (EF-P) KOW-like domain DWQ65_04825 PF01132 Elongation factor P (EF-P) OB domain DWQ65_04835 PF00293 NUDIX domain DWQ65_04845 PF07724 AAA domain (Cdc48 subfamily) DWQ65_04845 PF02861 Clp amino terminal domain, pathogenicity island component DWQ65_04845 PF17871 AAA lid domain DWQ65_04845 PF10431 C-terminal, D2-small domain, of ClpB protein DWQ65_04845 PF00004 ATPase family associated with various cellular activities (AAA) DWQ65_04860 PF02195 ParB-like nuclease domain DWQ65_04860 PF17762 HTH domain found in ParB protein DWQ65_04865 PF02863 Arginine repressor, C-terminal domain DWQ65_04865 PF01316 Arginine repressor, DNA binding domain DWQ65_04870 PF01042 Endoribonuclease L-PSP DWQ65_04885 PF16363 GDP-mannose 4,6 dehydratase DWQ65_04890 PF04321 RmlD substrate binding domain DWQ65_04895 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DWQ65_04905 PF01370 NAD dependent epimerase/dehydratase family DWQ65_04925 PF04991 LicD family DWQ65_04955 PF00266 Aminotransferase class-V DWQ65_04960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DWQ65_04960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DWQ65_05015 PF02978 Signal peptide binding domain DWQ65_05015 PF00448 SRP54-type protein, GTPase domain DWQ65_05015 PF02881 SRP54-type protein, helical bundle domain DWQ65_05025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DWQ65_05030 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_05035 PF08402 TOBE domain DWQ65_05035 PF00005 ABC transporter DWQ65_05065 PF17151 Periplasmic sensor domain DWQ65_05065 PF00990 Diguanylate cyclase, GGDEF domain DWQ65_05070 PF00563 EAL domain DWQ65_05070 PF00990 Diguanylate cyclase, GGDEF domain DWQ65_05070 PF08448 PAS fold DWQ65_05075 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DWQ65_05075 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DWQ65_05075 PF01189 16S rRNA methyltransferase RsmB/F DWQ65_05080 PF00849 RNA pseudouridylate synthase DWQ65_05080 PF04287 tRNA pseudouridine synthase C DWQ65_05090 PF04551 GcpE protein DWQ65_05100 PF02561 Flagellar protein FliS DWQ65_05105 PF02743 Cache domain DWQ65_05105 PF00672 HAMP domain DWQ65_05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_05120 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_05125 PF00156 Phosphoribosyl transferase domain DWQ65_05140 PF01476 LysM domain DWQ65_05140 PF01464 Transglycosylase SLT domain DWQ65_05150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DWQ65_05150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DWQ65_05155 PF01475 Ferric uptake regulator family DWQ65_05160 PF02195 ParB-like nuclease domain DWQ65_05160 PF17762 HTH domain found in ParB protein DWQ65_05165 PF13614 AAA domain DWQ65_05170 PF06832 Penicillin-Binding Protein C-terminus Family DWQ65_05170 PF00912 Transglycosylase DWQ65_05170 PF00905 Penicillin binding protein transpeptidase domain DWQ65_05175 PF17962 Bacterial macroglobulin domain 6 DWQ65_05175 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DWQ65_05175 PF01835 MG2 domain DWQ65_05175 PF07703 Alpha-2-macroglobulin bait region domain DWQ65_05175 PF07678 A-macroglobulin TED domain DWQ65_05175 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DWQ65_05175 PF00207 Alpha-2-macroglobulin family DWQ65_05175 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DWQ65_05175 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DWQ65_05180 PF00817 impB/mucB/samB family DWQ65_05180 PF11798 IMS family HHH motif DWQ65_05180 PF11799 impB/mucB/samB family C-terminal domain DWQ65_05195 PF08666 SAF domain DWQ65_05195 PF03102 NeuB family DWQ65_05205 PF08264 Anticodon-binding domain of tRNA DWQ65_05205 PF13603 Leucyl-tRNA synthetase, Domain 2 DWQ65_05205 PF09334 tRNA synthetases class I (M) DWQ65_05205 PF00133 tRNA synthetases class I (I, L, M and V) DWQ65_05210 PF08543 Phosphomethylpyrimidine kinase DWQ65_05215 PF00005 ABC transporter DWQ65_05215 PF02361 Cobalt transport protein DWQ65_05220 PF01551 Peptidase family M23 DWQ65_05220 PF08525 Opacity-associated protein A N-terminal motif DWQ65_05220 PF01476 LysM domain DWQ65_05230 PF01476 LysM domain DWQ65_05230 PF01551 Peptidase family M23 DWQ65_05230 PF08525 Opacity-associated protein A N-terminal motif DWQ65_05235 PF01547 Bacterial extracellular solute-binding protein DWQ65_05255 PF01975 Survival protein SurE DWQ65_05260 PF08544 GHMP kinases C terminal DWQ65_05260 PF10509 Galactokinase galactose-binding signature DWQ65_05265 PF00795 Carbon-nitrogen hydrolase DWQ65_05280 PF07085 DRTGG domain DWQ65_05280 PF02833 DHHA2 domain DWQ65_05280 PF01368 DHH family DWQ65_05280 PF00571 CBS domain DWQ65_05290 PF00905 Penicillin binding protein transpeptidase domain DWQ65_05290 PF03717 Penicillin-binding Protein dimerisation domain DWQ65_05290 PF03793 PASTA domain DWQ65_05305 PF02637 GatB domain DWQ65_05305 PF02934 GatB/GatE catalytic domain DWQ65_05310 PF01204 Trehalase DWQ65_05335 PF03313 Serine dehydratase alpha chain DWQ65_05340 PF03315 Serine dehydratase beta chain DWQ65_05340 PF01842 ACT domain DWQ65_05345 PF02896 PEP-utilising enzyme, TIM barrel domain DWQ65_05345 PF00391 PEP-utilising enzyme, mobile domain DWQ65_05345 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DWQ65_05365 PF02915 Rubrerythrin DWQ65_05375 PF01973 Protein of unknown function DUF115 DWQ65_05390 PF01297 Zinc-uptake complex component A periplasmic DWQ65_05395 PF00005 ABC transporter DWQ65_05400 PF00950 ABC 3 transport family DWQ65_05405 PF01546 Peptidase family M20/M25/M40 DWQ65_05405 PF07687 Peptidase dimerisation domain DWQ65_05425 PF02875 Mur ligase family, glutamate ligase domain DWQ65_05425 PF08245 Mur ligase middle domain DWQ65_05455 PF02881 SRP54-type protein, helical bundle domain DWQ65_05455 PF00448 SRP54-type protein, GTPase domain DWQ65_05465 PF02687 FtsX-like permease family DWQ65_05465 PF12704 MacB-like periplasmic core domain DWQ65_05470 PF00005 ABC transporter DWQ65_05485 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DWQ65_05495 PF01409 tRNA synthetases class II core domain (F) DWQ65_05510 PF00177 Ribosomal protein S7p/S5e DWQ65_05515 PF00164 Ribosomal protein S12/S23 DWQ65_05520 PF00890 FAD binding domain DWQ65_05520 PF14537 Cytochrome c3 DWQ65_05535 PF00986 DNA gyrase B subunit, carboxyl terminus DWQ65_05535 PF00204 DNA gyrase B DWQ65_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DWQ65_05535 PF01751 Toprim domain DWQ65_05575 PF01554 MatE DWQ65_05580 PF02743 Cache domain DWQ65_05580 PF00672 HAMP domain DWQ65_05580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_05615 PF02308 MgtC family DWQ65_05620 PF16258 Domain of unknown function (DUF4912) DWQ65_05635 PF10609 NUBPL iron-transfer P-loop NTPase DWQ65_05645 PF01790 Prolipoprotein diacylglyceryl transferase DWQ65_05650 PF00521 DNA gyrase/topoisomerase IV, subunit A DWQ65_05665 PF07724 AAA domain (Cdc48 subfamily) DWQ65_05665 PF10431 C-terminal, D2-small domain, of ClpB protein DWQ65_05665 PF06689 ClpX C4-type zinc finger DWQ65_05670 PF00574 Clp protease DWQ65_05675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DWQ65_05675 PF05697 Bacterial trigger factor protein (TF) DWQ65_05675 PF05698 Bacterial trigger factor protein (TF) C-terminus DWQ65_05710 PF00072 Response regulator receiver domain DWQ65_05710 PF00990 Diguanylate cyclase, GGDEF domain DWQ65_05720 PF01207 Dihydrouridine synthase (Dus) DWQ65_05725 PF01026 TatD related DNase DWQ65_05730 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DWQ65_05730 PF01926 50S ribosome-binding GTPase DWQ65_05735 PF13411 MerR HTH family regulatory protein DWQ65_05750 PF01668 SmpB protein DWQ65_05755 PF10502 Signal peptidase, peptidase S26 DWQ65_05760 PF06969 HemN C-terminal domain DWQ65_05760 PF04055 Radical SAM superfamily DWQ65_05770 PF01250 Ribosomal protein S6 DWQ65_05775 PF00436 Single-strand binding protein family DWQ65_05780 PF01084 Ribosomal protein S18 DWQ65_05785 PF03948 Ribosomal protein L9, C-terminal domain DWQ65_05785 PF01281 Ribosomal protein L9, N-terminal domain DWQ65_05790 PF00772 DnaB-like helicase N terminal domain DWQ65_05790 PF03796 DnaB-like helicase C terminal domain DWQ65_05830 PF10396 GTP-binding protein TrmE N-terminus DWQ65_05830 PF01926 50S ribosome-binding GTPase DWQ65_05830 PF12631 MnmE helical domain DWQ65_05835 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DWQ65_05835 PF01926 50S ribosome-binding GTPase DWQ65_05855 PF13333 Integrase core domain DWQ65_05855 PF00665 Integrase core domain DWQ65_05855 PF13276 HTH-like domain DWQ65_05865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DWQ65_05865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DWQ65_05865 PF02378 Phosphotransferase system, EIIC DWQ65_05880 PF04402 Protein of unknown function (DUF541) DWQ65_05885 PF00293 NUDIX domain DWQ65_05890 PF00226 DnaJ domain DWQ65_05890 PF00684 DnaJ central domain DWQ65_05890 PF01556 DnaJ C terminal domain DWQ65_05895 PF00012 Hsp70 protein DWQ65_05900 PF01025 GrpE DWQ65_05905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DWQ65_05905 PF02874 ATP synthase alpha/beta family, beta-barrel domain DWQ65_05910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DWQ65_05910 PF02874 ATP synthase alpha/beta family, beta-barrel domain DWQ65_05910 PF16886 ATPsynthase alpha/beta subunit N-term extension DWQ65_05930 PF01496 V-type ATPase 116kDa subunit family DWQ65_05935 PF01992 ATP synthase (C/AC39) subunit DWQ65_05945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DWQ65_05945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DWQ65_05950 PF03840 Preprotein translocase SecG subunit DWQ65_05965 PF04227 Indigoidine synthase A like protein DWQ65_05970 PF00294 pfkB family carbohydrate kinase DWQ65_05975 PF02381 MraZ protein, putative antitoxin-like DWQ65_05980 PF01795 MraW methylase family DWQ65_05990 PF08245 Mur ligase middle domain DWQ65_05990 PF01225 Mur ligase family, catalytic domain DWQ65_05990 PF02875 Mur ligase family, glutamate ligase domain DWQ65_05995 PF01098 Cell cycle protein DWQ65_06000 PF08478 POTRA domain, FtsQ-type DWQ65_06000 PF03799 Cell division protein FtsQ DWQ65_06005 PF02491 SHS2 domain inserted in FTSA DWQ65_06010 PF12327 FtsZ family, C-terminal domain DWQ65_06010 PF00091 Tubulin/FtsZ family, GTPase domain DWQ65_06015 PF02899 Phage integrase, N-terminal SAM-like domain DWQ65_06015 PF00589 Phage integrase family DWQ65_06025 PF17782 DprA winged helix domain DWQ65_06025 PF02481 DNA recombination-mediator protein A DWQ65_06030 PF01131 DNA topoisomerase DWQ65_06030 PF01396 Topoisomerase DNA binding C4 zinc finger DWQ65_06030 PF01751 Toprim domain DWQ65_06035 PF02899 Phage integrase, N-terminal SAM-like domain DWQ65_06035 PF00589 Phage integrase family DWQ65_06040 PF00227 Proteasome subunit DWQ65_06045 PF00004 ATPase family associated with various cellular activities (AAA) DWQ65_06045 PF07724 AAA domain (Cdc48 subfamily) DWQ65_06055 PF00460 Flagella basal body rod protein DWQ65_06060 PF00460 Flagella basal body rod protein DWQ65_06060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DWQ65_06065 PF02049 Flagellar hook-basal body complex protein FliE DWQ65_06070 PF08345 Flagellar M-ring protein C-terminal DWQ65_06070 PF01514 Secretory protein of YscJ/FliF family DWQ65_06075 PF01706 FliG C-terminal domain DWQ65_06075 PF14842 FliG N-terminal domain DWQ65_06075 PF14841 FliG middle domain DWQ65_06080 PF02108 Flagellar assembly protein FliH DWQ65_06085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DWQ65_06085 PF02874 ATP synthase alpha/beta family, beta-barrel domain DWQ65_06085 PF18269 T3SS EscN ATPase C-terminal domain DWQ65_06100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DWQ65_06100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DWQ65_06115 PF00862 Sucrose synthase DWQ65_06115 PF00534 Glycosyl transferases group 1 DWQ65_06120 PF00271 Helicase conserved C-terminal domain DWQ65_06120 PF00270 DEAD/DEAH box helicase DWQ65_06145 PF00392 Bacterial regulatory proteins, gntR family DWQ65_06145 PF07729 FCD domain DWQ65_06150 PF01266 FAD dependent oxidoreductase DWQ65_06155 PF07992 Pyridine nucleotide-disulphide oxidoreductase DWQ65_06155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DWQ65_06165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DWQ65_06165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DWQ65_06170 PF01565 FAD binding domain DWQ65_06170 PF02913 FAD linked oxidases, C-terminal domain DWQ65_06180 PF02580 D-Tyr-tRNA(Tyr) deacylase DWQ65_06185 PF01195 Peptidyl-tRNA hydrolase DWQ65_06205 PF01546 Peptidase family M20/M25/M40 DWQ65_06205 PF07687 Peptidase dimerisation domain DWQ65_06220 PF06969 HemN C-terminal domain DWQ65_06220 PF04055 Radical SAM superfamily DWQ65_06230 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DWQ65_06230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DWQ65_06250 PF00403 Heavy-metal-associated domain DWQ65_06265 PF00294 pfkB family carbohydrate kinase DWQ65_06270 PF01048 Phosphorylase superfamily DWQ65_06275 PF00814 Glycoprotease family DWQ65_06285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_06285 PF00672 HAMP domain DWQ65_06285 PF02743 Cache domain DWQ65_06310 PF00512 His Kinase A (phospho-acceptor) domain DWQ65_06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DWQ65_06315 PF13276 HTH-like domain DWQ65_06315 PF13333 Integrase core domain DWQ65_06315 PF00665 Integrase core domain DWQ65_06320 PF00365 Phosphofructokinase DWQ65_06325 PF16314 Domain of unknown function (DUF4954) DWQ65_06340 PF00348 Polyprenyl synthetase DWQ65_06350 PF13277 YmdB-like protein DWQ65_06380 PF03033 Glycosyltransferase family 28 N-terminal domain DWQ65_06380 PF04101 Glycosyltransferase family 28 C-terminal domain DWQ65_06385 PF02674 Colicin V production protein DWQ65_06390 PF09115 DNA polymerase III, delta subunit, C terminal DWQ65_06395 PF00512 His Kinase A (phospho-acceptor) domain DWQ65_06395 PF00989 PAS fold DWQ65_06395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DWQ65_06400 PF00072 Response regulator receiver domain DWQ65_06400 PF00158 Sigma-54 interaction domain DWQ65_06400 PF02954 Bacterial regulatory protein, Fis family DWQ65_06450 PF02421 Ferrous iron transport protein B DWQ65_06450 PF17910 FeoB cytosolic helical domain DWQ65_06450 PF07664 Ferrous iron transport protein B C terminus DWQ65_06450 PF04023 FeoA domain DWQ65_06450 PF07670 Nucleoside recognition DWQ65_06465 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DWQ65_06465 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DWQ65_06465 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DWQ65_06465 PF10371 Domain of unknown function DWQ65_06465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DWQ65_06470 PF00551 Formyl transferase DWQ65_06470 PF02911 Formyl transferase, C-terminal domain DWQ65_06475 PF01327 Polypeptide deformylase DWQ65_06480 PF01165 Ribosomal protein S21 DWQ65_06505 PF01177 Asp/Glu/Hydantoin racemase DWQ65_06510 PF03193 RsgA GTPase DWQ65_06510 PF16745 RsgA N-terminal domain DWQ65_06515 PF01713 Smr domain DWQ65_06515 PF00488 MutS domain V DWQ65_06525 PF00186 Dihydrofolate reductase DWQ65_06530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DWQ65_06530 PF00460 Flagella basal body rod protein DWQ65_06535 PF10135 Rod binding protein DWQ65_06540 PF00579 tRNA synthetases class I (W and Y) DWQ65_06550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DWQ65_06560 PF17131 Outer membrane lipoprotein-sorting protein DWQ65_06570 PF17932 Tetracyclin repressor-like, C-terminal domain DWQ65_06570 PF00440 Bacterial regulatory proteins, tetR family DWQ65_06580 PF01171 PP-loop family DWQ65_06585 PF13407 Periplasmic binding protein domain DWQ65_06590 PF13277 YmdB-like protein DWQ65_06595 PF00654 Voltage gated chloride channel DWQ65_06600 PF01725 Ham1 family DWQ65_06615 PF04960 Glutaminase DWQ65_06620 PF01235 Sodium:alanine symporter family DWQ65_06630 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DWQ65_06635 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DWQ65_06640 PF08218 Citrate lyase ligase C-terminal domain DWQ65_06640 PF00583 Acetyltransferase (GNAT) family DWQ65_06655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DWQ65_06665 PF16811 TRAP transporter T-component DWQ65_06675 PF01699 Sodium/calcium exchanger protein DWQ65_06690 PF02690 Na+/Pi-cotransporter DWQ65_06695 PF12706 Beta-lactamase superfamily domain DWQ65_06695 PF03099 Biotin/lipoate A/B protein ligase family DWQ65_06710 PF00575 S1 RNA binding domain DWQ65_06715 PF00072 Response regulator receiver domain DWQ65_06715 PF00158 Sigma-54 interaction domain DWQ65_06715 PF02954 Bacterial regulatory protein, Fis family DWQ65_06730 PF01008 Initiation factor 2 subunit family DWQ65_06755 PF00464 Serine hydroxymethyltransferase DWQ65_06790 PF14102 Capsule biosynthesis CapC DWQ65_06795 PF08245 Mur ligase middle domain DWQ65_06800 PF07733 Bacterial DNA polymerase III alpha NTPase domain DWQ65_06800 PF02811 PHP domain DWQ65_06800 PF14579 Helix-hairpin-helix motif DWQ65_06800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DWQ65_06805 PF02325 YGGT family DWQ65_06810 PF01467 Cytidylyltransferase-like DWQ65_06815 PF03009 Glycerophosphoryl diester phosphodiesterase family DWQ65_06820 PF02677 Epoxyqueuosine reductase QueH DWQ65_06830 PF02617 ATP-dependent Clp protease adaptor protein ClpS DWQ65_06835 PF02861 Clp amino terminal domain, pathogenicity island component DWQ65_06835 PF17871 AAA lid domain DWQ65_06835 PF00004 ATPase family associated with various cellular activities (AAA) DWQ65_06835 PF07724 AAA domain (Cdc48 subfamily) DWQ65_06835 PF10431 C-terminal, D2-small domain, of ClpB protein DWQ65_06855 PF13419 Haloacid dehalogenase-like hydrolase DWQ65_06865 PF07691 PA14 domain DWQ65_06865 PF00728 Glycosyl hydrolase family 20, catalytic domain DWQ65_06865 PF02838 Glycosyl hydrolase family 20, domain 2 DWQ65_06870 PF01066 CDP-alcohol phosphatidyltransferase DWQ65_06885 PF06826 Predicted Permease Membrane Region DWQ65_06885 PF02080 TrkA-C domain DWQ65_06890 PF16325 Peptidase family U32 C-terminal domain DWQ65_06890 PF01136 Peptidase family U32 DWQ65_06900 PF00465 Iron-containing alcohol dehydrogenase DWQ65_06920 PF02390 Putative methyltransferase DWQ65_06965 PF01740 STAS domain DWQ65_06980 PF00829 Ribosomal prokaryotic L21 protein DWQ65_06990 PF01016 Ribosomal L27 protein DWQ65_06995 PF01018 GTP1/OBG DWQ65_06995 PF01926 50S ribosome-binding GTPase DWQ65_07000 PF01467 Cytidylyltransferase-like DWQ65_07025 PF02446 4-alpha-glucanotransferase DWQ65_07045 PF00005 ABC transporter DWQ65_07055 PF03239 Iron permease FTR1 family DWQ65_07060 PF10634 Fe2+ transport protein DWQ65_07075 PF00005 ABC transporter DWQ65_07075 PF02687 FtsX-like permease family DWQ65_07075 PF12704 MacB-like periplasmic core domain DWQ65_07085 PF01555 DNA methylase DWQ65_07085 PF18755 Restriction Enzyme Adenine Methylase Associated DWQ65_07090 PF00005 ABC transporter DWQ65_07110 PF01794 Ferric reductase like transmembrane component DWQ65_07110 PF04205 FMN-binding domain DWQ65_07115 PF03060 Nitronate monooxygenase DWQ65_07120 PF00953 Glycosyl transferase family 4 DWQ65_07130 PF12838 4Fe-4S dicluster domain DWQ65_07140 PF04225 Opacity-associated protein A LysM-like domain DWQ65_07140 PF01551 Peptidase family M23 DWQ65_07150 PF00905 Penicillin binding protein transpeptidase domain DWQ65_07150 PF00912 Transglycosylase DWQ65_07150 PF17092 Penicillin-binding protein OB-like domain DWQ65_07165 PF12796 Ankyrin repeats (3 copies) DWQ65_07200 PF03590 Aspartate-ammonia ligase DWQ65_07210 PF04011 LemA family DWQ65_07220 PF04536 TPM domain DWQ65_07255 PF03600 Citrate transporter DWQ65_07260 PF02926 THUMP domain DWQ65_07260 PF02568 Thiamine biosynthesis protein (ThiI) DWQ65_07270 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DWQ65_07275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DWQ65_07275 PF00460 Flagella basal body rod protein DWQ65_07285 PF00392 Bacterial regulatory proteins, gntR family DWQ65_07285 PF07702 UTRA domain DWQ65_07290 PF02378 Phosphotransferase system, EIIC DWQ65_07290 PF00367 phosphotransferase system, EIIB DWQ65_07290 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DWQ65_07300 PF00232 Glycosyl hydrolase family 1 DWQ65_07310 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DWQ65_07315 PF07726 ATPase family associated with various cellular activities (AAA) DWQ65_07315 PF17863 AAA lid domain DWQ65_07325 PF01841 Transglutaminase-like superfamily DWQ65_07325 PF13559 Domain of unknown function (DUF4129) DWQ65_07325 PF11992 Domain of unknown function (DUF3488) DWQ65_07330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DWQ65_07345 PF14849 YidC periplasmic domain DWQ65_07345 PF02096 60Kd inner membrane protein DWQ65_07350 PF01809 Putative membrane protein insertion efficiency factor DWQ65_07360 PF00468 Ribosomal protein L34 DWQ65_07370 PF02446 4-alpha-glucanotransferase DWQ65_07375 PF00288 GHMP kinases N terminal domain DWQ65_07375 PF08544 GHMP kinases C terminal DWQ65_07375 PF10509 Galactokinase galactose-binding signature DWQ65_07385 PF02603 HPr Serine kinase N terminus DWQ65_07385 PF07475 HPr Serine kinase C-terminal domain DWQ65_07390 PF00381 PTS HPr component phosphorylation site DWQ65_07410 PF17862 AAA+ lid domain DWQ65_07410 PF01434 Peptidase family M41 DWQ65_07410 PF00004 ATPase family associated with various cellular activities (AAA) DWQ65_07440 PF01381 Helix-turn-helix DWQ65_07440 PF00717 Peptidase S24-like DWQ65_07520 PF02772 S-adenosylmethionine synthetase, central domain DWQ65_07520 PF02773 S-adenosylmethionine synthetase, C-terminal domain DWQ65_07520 PF00438 S-adenosylmethionine synthetase, N-terminal domain DWQ65_07535 PF02653 Branched-chain amino acid transport system / permease component DWQ65_07540 PF00005 ABC transporter DWQ65_07545 PF13407 Periplasmic binding protein domain DWQ65_07545 PF18610 Periplasmic binding protein domain DWQ65_07555 PF08544 GHMP kinases C terminal DWQ65_07555 PF00288 GHMP kinases N terminal domain DWQ65_07560 PF04026 SpoVG DWQ65_07570 PF01386 Ribosomal L25p family DWQ65_07570 PF14693 Ribosomal protein TL5, C-terminal domain DWQ65_07575 PF01171 PP-loop family DWQ65_07585 PF13180 PDZ domain DWQ65_07590 PF00679 Elongation factor G C-terminus DWQ65_07590 PF14492 Elongation Factor G, domain II DWQ65_07590 PF00009 Elongation factor Tu GTP binding domain DWQ65_07590 PF03144 Elongation factor Tu domain 2 DWQ65_07590 PF06421 GTP-binding protein LepA C-terminus DWQ65_07595 PF02743 Cache domain DWQ65_07595 PF00672 HAMP domain DWQ65_07595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_07600 PF09382 RQC domain DWQ65_07600 PF00270 DEAD/DEAH box helicase DWQ65_07600 PF00271 Helicase conserved C-terminal domain DWQ65_07600 PF00570 HRDC domain DWQ65_07600 PF16124 RecQ zinc-binding DWQ65_07660 PF00092 von Willebrand factor type A domain DWQ65_07670 PF01882 Protein of unknown function DUF58 DWQ65_07690 PF00534 Glycosyl transferases group 1 DWQ65_07690 PF08323 Starch synthase catalytic domain DWQ65_07745 PF04298 Putative neutral zinc metallopeptidase DWQ65_07780 PF05491 RuvB C-terminal winged helix domain DWQ65_07780 PF05496 Holliday junction DNA helicase RuvB P-loop domain DWQ65_07780 PF17864 RuvB AAA lid domain DWQ65_07785 PF02547 Queuosine biosynthesis protein DWQ65_07795 PF02127 Aminopeptidase I zinc metalloprotease (M18) DWQ65_07805 PF13742 OB-fold nucleic acid binding domain DWQ65_07805 PF02601 Exonuclease VII, large subunit DWQ65_07825 PF02028 BCCT, betaine/carnitine/choline family transporter DWQ65_07830 PF12804 MobA-like NTP transferase domain DWQ65_07835 PF01430 Hsp33 protein DWQ65_07840 PF02743 Cache domain DWQ65_07840 PF00672 HAMP domain DWQ65_07840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_07865 PF01926 50S ribosome-binding GTPase DWQ65_07870 PF00583 Acetyltransferase (GNAT) family DWQ65_07870 PF00814 Glycoprotease family DWQ65_07875 PF04474 Protein of unknown function (DUF554) DWQ65_07890 PF02417 Chromate transporter DWQ65_07915 PF06745 KaiC DWQ65_07915 PF18073 Rubredoxin metal binding domain DWQ65_07920 PF13525 Outer membrane lipoprotein DWQ65_07930 PF06470 SMC proteins Flexible Hinge Domain DWQ65_07930 PF02463 RecF/RecN/SMC N terminal domain DWQ65_07945 PF00072 Response regulator receiver domain DWQ65_07955 PF01584 CheW-like domain DWQ65_07960 PF02895 Signal transducing histidine kinase, homodimeric domain DWQ65_07960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DWQ65_07960 PF01584 CheW-like domain DWQ65_07960 PF01627 Hpt domain DWQ65_07960 PF07194 P2 response regulator binding domain DWQ65_07990 PF04055 Radical SAM superfamily DWQ65_07995 PF02901 Pyruvate formate lyase-like DWQ65_07995 PF01228 Glycine radical DWQ65_08005 PF00669 Bacterial flagellin N-terminal helical region DWQ65_08005 PF00700 Bacterial flagellin C-terminal helical region DWQ65_08015 PF03471 Transporter associated domain DWQ65_08015 PF01595 Cyclin M transmembrane N-terminal domain DWQ65_08015 PF00571 CBS domain DWQ65_08025 PF00665 Integrase core domain DWQ65_08025 PF13333 Integrase core domain DWQ65_08030 PF13276 HTH-like domain DWQ65_08030 PF13333 Integrase core domain DWQ65_08030 PF00665 Integrase core domain DWQ65_08055 PF03553 Na+/H+ antiporter family DWQ65_08060 PF02527 rRNA small subunit methyltransferase G DWQ65_08085 PF02254 TrkA-N domain DWQ65_08085 PF02080 TrkA-C domain DWQ65_08090 PF00672 HAMP domain DWQ65_08090 PF12729 Four helix bundle sensory module for signal transduction DWQ65_08090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_08105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_08105 PF00672 HAMP domain DWQ65_08110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_08110 PF02743 Cache domain DWQ65_08110 PF00672 HAMP domain DWQ65_08125 PF06071 Protein of unknown function (DUF933) DWQ65_08125 PF01926 50S ribosome-binding GTPase DWQ65_08140 PF02632 BioY family DWQ65_08145 PF00005 ABC transporter DWQ65_08160 PF03611 PTS system sugar-specific permease component DWQ65_08165 PF00456 Transketolase, thiamine diphosphate binding domain DWQ65_08170 PF02779 Transketolase, pyrimidine binding domain DWQ65_08170 PF02780 Transketolase, C-terminal domain DWQ65_08175 PF03009 Glycerophosphoryl diester phosphodiesterase family DWQ65_08205 PF13276 HTH-like domain DWQ65_08205 PF00665 Integrase core domain DWQ65_08205 PF13333 Integrase core domain DWQ65_08210 PF12695 Alpha/beta hydrolase family DWQ65_08215 PF01925 Sulfite exporter TauE/SafE DWQ65_08220 PF03824 High-affinity nickel-transport protein DWQ65_08225 PF00210 Ferritin-like domain DWQ65_08245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DWQ65_08245 PF03484 tRNA synthetase B5 domain DWQ65_08255 PF01820 D-ala D-ala ligase N-terminus DWQ65_08255 PF07478 D-ala D-ala ligase C-terminus DWQ65_08265 PF00005 ABC transporter DWQ65_08265 PF00664 ABC transporter transmembrane region DWQ65_08270 PF00005 ABC transporter DWQ65_08270 PF00664 ABC transporter transmembrane region DWQ65_08275 PF00005 ABC transporter DWQ65_08275 PF00664 ABC transporter transmembrane region DWQ65_08280 PF00664 ABC transporter transmembrane region DWQ65_08280 PF00005 ABC transporter DWQ65_08285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DWQ65_08285 PF00005 ABC transporter DWQ65_08290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DWQ65_08290 PF00005 ABC transporter DWQ65_08295 PF12911 N-terminal TM domain of oligopeptide transport permease C DWQ65_08295 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_08315 PF07992 Pyridine nucleotide-disulphide oxidoreductase DWQ65_08320 PF01915 Glycosyl hydrolase family 3 C-terminal domain DWQ65_08320 PF00933 Glycosyl hydrolase family 3 N terminal domain DWQ65_08340 PF00578 AhpC/TSA family DWQ65_08345 PF08220 DeoR-like helix-turn-helix domain DWQ65_08345 PF00455 DeoR C terminal sensor domain DWQ65_08350 PF00294 pfkB family carbohydrate kinase DWQ65_08355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DWQ65_08355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DWQ65_08360 PF00381 PTS HPr component phosphorylation site DWQ65_08380 PF01022 Bacterial regulatory protein, arsR family DWQ65_08390 PF00403 Heavy-metal-associated domain DWQ65_08400 PF02661 Fic/DOC family DWQ65_08400 PF13784 Fic/DOC family N-terminal DWQ65_08410 PF01609 Transposase DDE domain DWQ65_08420 PF01555 DNA methylase DWQ65_08445 PF13361 UvrD-like helicase C-terminal domain DWQ65_08445 PF00580 UvrD/REP helicase N-terminal domain DWQ65_08460 PF01680 SOR/SNZ family DWQ65_08465 PF00392 Bacterial regulatory proteins, gntR family DWQ65_08465 PF00155 Aminotransferase class I and II DWQ65_08475 PF01037 Lrp/AsnC ligand binding domain DWQ65_08480 PF00155 Aminotransferase class I and II DWQ65_08485 PF05525 Branched-chain amino acid transport protein DWQ65_08490 PF00156 Phosphoribosyl transferase domain DWQ65_08495 PF00731 AIR carboxylase DWQ65_08500 PF00586 AIR synthase related protein, N-terminal domain DWQ65_08500 PF02769 AIR synthase related protein, C-terminal domain DWQ65_08500 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DWQ65_08505 PF01259 SAICAR synthetase DWQ65_08515 PF02132 RecR protein DWQ65_08515 PF13662 Toprim domain DWQ65_08520 PF02575 YbaB/EbfC DNA-binding family DWQ65_08525 PF12169 DNA polymerase III subunits gamma and tau domain III DWQ65_08535 PF03062 MBOAT, membrane-bound O-acyltransferase family DWQ65_08550 PF03358 NADPH-dependent FMN reductase DWQ65_08555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_08555 PF00672 HAMP domain DWQ65_08555 PF02743 Cache domain DWQ65_08570 PF16363 GDP-mannose 4,6 dehydratase DWQ65_08580 PF00011 Hsp20/alpha crystallin family DWQ65_08585 PF07992 Pyridine nucleotide-disulphide oxidoreductase DWQ65_08595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DWQ65_08595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DWQ65_08595 PF02770 Acyl-CoA dehydrogenase, middle domain DWQ65_08600 PF01012 Electron transfer flavoprotein domain DWQ65_08605 PF01012 Electron transfer flavoprotein domain DWQ65_08605 PF00766 Electron transfer flavoprotein FAD-binding domain DWQ65_08630 PF03471 Transporter associated domain DWQ65_08630 PF00571 CBS domain DWQ65_08635 PF02130 Uncharacterized protein family UPF0054 DWQ65_08640 PF01966 HD domain DWQ65_08640 PF07698 7TM receptor with intracellular HD hydrolase DWQ65_08640 PF07697 7TM-HD extracellular DWQ65_08645 PF02562 PhoH-like protein DWQ65_08655 PF00750 tRNA synthetases class I (R) DWQ65_08655 PF05746 DALR anticodon binding domain DWQ65_08655 PF03485 Arginyl tRNA synthetase N terminal domain DWQ65_08665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DWQ65_08665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DWQ65_08670 PF00696 Amino acid kinase family DWQ65_08680 PF03477 ATP cone domain DWQ65_08680 PF02867 Ribonucleotide reductase, barrel domain DWQ65_08680 PF00317 Ribonucleotide reductase, all-alpha domain DWQ65_08685 PF01554 MatE DWQ65_08690 PF00871 Acetokinase family DWQ65_08700 PF11756 Nitrous oxide-stimulated promoter DWQ65_08715 PF01048 Phosphorylase superfamily DWQ65_08720 PF02554 Carbon starvation protein CstA DWQ65_08730 PF02609 Exonuclease VII small subunit DWQ65_08735 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DWQ65_08735 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DWQ65_08740 PF00155 Aminotransferase class I and II DWQ65_08745 PF03806 AbgT putative transporter family DWQ65_08760 PF01751 Toprim domain DWQ65_08760 PF00986 DNA gyrase B subunit, carboxyl terminus DWQ65_08760 PF00204 DNA gyrase B DWQ65_08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DWQ65_08770 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_08780 PF01547 Bacterial extracellular solute-binding protein DWQ65_08785 PF02938 GAD domain DWQ65_08785 PF01336 OB-fold nucleic acid binding domain DWQ65_08785 PF00152 tRNA synthetases class II (D, K and N) DWQ65_08790 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DWQ65_08790 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DWQ65_08795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DWQ65_08795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DWQ65_08805 PF01145 SPFH domain / Band 7 family DWQ65_08810 PF01145 SPFH domain / Band 7 family DWQ65_08810 PF16200 C-terminal region of band_7 DWQ65_08850 PF00072 Response regulator receiver domain DWQ65_08850 PF00196 Bacterial regulatory proteins, luxR family DWQ65_08855 PF07730 Histidine kinase DWQ65_08865 PF00342 Phosphoglucose isomerase DWQ65_08875 PF18766 SWI2/SNF2 ATPase DWQ65_08875 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DWQ65_08875 PF12008 Type I restriction and modification enzyme - subunit R C terminal DWQ65_08880 PF01420 Type I restriction modification DNA specificity domain DWQ65_08890 PF12161 HsdM N-terminal domain DWQ65_08890 PF02384 N-6 DNA Methylase DWQ65_08925 PF17854 FtsK alpha domain DWQ65_08925 PF01580 FtsK/SpoIIIE family DWQ65_08925 PF09397 Ftsk gamma domain DWQ65_08930 PF02673 Bacitracin resistance protein BacA DWQ65_08935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DWQ65_08935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DWQ65_08940 PF02743 Cache domain DWQ65_08940 PF00672 HAMP domain DWQ65_08940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_08960 PF01212 Beta-eliminating lyase DWQ65_08965 PF16916 Dimerisation domain of Zinc Transporter DWQ65_08965 PF01545 Cation efflux family DWQ65_08970 PF01734 Patatin-like phospholipase DWQ65_08975 PF07009 NusG domain II DWQ65_09000 PF00041 Fibronectin type III domain DWQ65_09000 PF00704 Glycosyl hydrolases family 18 DWQ65_09015 PF01479 S4 domain DWQ65_09015 PF00849 RNA pseudouridylate synthase DWQ65_09070 PF01171 PP-loop family DWQ65_09070 PF00117 Glutamine amidotransferase class-I DWQ65_09070 PF00958 GMP synthase C terminal domain DWQ65_09075 PF00302 Chloramphenicol acetyltransferase DWQ65_09080 PF01171 PP-loop family DWQ65_09080 PF00117 Glutamine amidotransferase class-I DWQ65_09080 PF00958 GMP synthase C terminal domain DWQ65_09090 PF07715 TonB-dependent Receptor Plug Domain DWQ65_09090 PF00593 TonB dependent receptor DWQ65_09105 PF00069 Protein kinase domain DWQ65_09105 PF03781 Sulfatase-modifying factor enzyme 1 DWQ65_09110 PF01618 MotA/TolQ/ExbB proton channel family DWQ65_09115 PF02472 Biopolymer transport protein ExbD/TolR DWQ65_09140 PF01196 Ribosomal protein L17 DWQ65_09145 PF01000 RNA polymerase Rpb3/RpoA insert domain DWQ65_09145 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DWQ65_09145 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DWQ65_09150 PF00411 Ribosomal protein S11 DWQ65_09155 PF00416 Ribosomal protein S13/S18 DWQ65_09160 PF00444 Ribosomal protein L36 DWQ65_09165 PF00344 SecY translocase DWQ65_09170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DWQ65_09175 PF00327 Ribosomal protein L30p/L7e DWQ65_09180 PF00333 Ribosomal protein S5, N-terminal domain DWQ65_09180 PF03719 Ribosomal protein S5, C-terminal domain DWQ65_09185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DWQ65_09190 PF00347 Ribosomal protein L6 DWQ65_09195 PF00410 Ribosomal protein S8 DWQ65_09200 PF00253 Ribosomal protein S14p/S29e DWQ65_09205 PF00673 ribosomal L5P family C-terminus DWQ65_09205 PF00281 Ribosomal protein L5 DWQ65_09210 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DWQ65_09210 PF00467 KOW motif DWQ65_09215 PF00238 Ribosomal protein L14p/L23e DWQ65_09220 PF00366 Ribosomal protein S17 DWQ65_09225 PF00831 Ribosomal L29 protein DWQ65_09230 PF00252 Ribosomal protein L16p/L10e DWQ65_09235 PF00189 Ribosomal protein S3, C-terminal domain DWQ65_09235 PF07650 KH domain DWQ65_09240 PF00237 Ribosomal protein L22p/L17e DWQ65_09245 PF00203 Ribosomal protein S19 DWQ65_09250 PF00181 Ribosomal Proteins L2, RNA binding domain DWQ65_09250 PF03947 Ribosomal Proteins L2, C-terminal domain DWQ65_09255 PF00276 Ribosomal protein L23 DWQ65_09260 PF00573 Ribosomal protein L4/L1 family DWQ65_09265 PF00297 Ribosomal protein L3 DWQ65_09270 PF00338 Ribosomal protein S10p/S20e DWQ65_09275 PF03143 Elongation factor Tu C-terminal domain DWQ65_09275 PF00009 Elongation factor Tu GTP binding domain DWQ65_09275 PF03144 Elongation factor Tu domain 2 DWQ65_09285 PF01476 LysM domain DWQ65_09285 PF04972 BON domain DWQ65_09290 PF06397 Desulfoferrodoxin, N-terminal domain DWQ65_09290 PF01880 Desulfoferrodoxin DWQ65_09295 PF01966 HD domain DWQ65_09315 PF00962 Adenosine/AMP deaminase DWQ65_09320 PF04468 PSP1 C-terminal conserved region DWQ65_09335 PF01476 LysM domain DWQ65_09335 PF01551 Peptidase family M23 DWQ65_09335 PF08525 Opacity-associated protein A N-terminal motif DWQ65_09345 PF00472 RF-1 domain DWQ65_09345 PF03462 PCRF domain DWQ65_09355 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DWQ65_09355 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DWQ65_09355 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DWQ65_09365 PF10609 NUBPL iron-transfer P-loop NTPase DWQ65_09370 PF00448 SRP54-type protein, GTPase domain DWQ65_09375 PF00771 FHIPEP family DWQ65_09380 PF01312 FlhB HrpN YscU SpaS Family DWQ65_09385 PF01311 Bacterial export proteins, family 1 DWQ65_09390 PF01313 Bacterial export proteins, family 3 DWQ65_09395 PF00813 FliP family DWQ65_09405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DWQ65_09405 PF04509 CheC-like family DWQ65_09410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DWQ65_09410 PF02154 Flagellar motor switch protein FliM DWQ65_09415 PF03748 Flagellar basal body-associated protein FliL DWQ65_09420 PF00691 OmpA family DWQ65_09420 PF13677 Membrane MotB of proton-channel complex MotA/MotB DWQ65_09425 PF01618 MotA/TolQ/ExbB proton channel family DWQ65_09435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DWQ65_09435 PF07559 Flagellar basal body protein FlaE DWQ65_09435 PF00460 Flagella basal body rod protein DWQ65_09440 PF03963 Flagellar hook capping protein - N-terminal region DWQ65_09465 PF00152 tRNA synthetases class II (D, K and N) DWQ65_09480 PF05227 CHASE3 domain DWQ65_09480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_09480 PF00672 HAMP domain DWQ65_09495 PF08439 Oligopeptidase F DWQ65_09495 PF01432 Peptidase family M3 DWQ65_09500 PF01139 tRNA-splicing ligase RtcB DWQ65_09505 PF02378 Phosphotransferase system, EIIC DWQ65_09505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DWQ65_09505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DWQ65_09510 PF08220 DeoR-like helix-turn-helix domain DWQ65_09510 PF00455 DeoR C terminal sensor domain DWQ65_09515 PF00107 Zinc-binding dehydrogenase DWQ65_09515 PF08240 Alcohol dehydrogenase GroES-like domain DWQ65_09525 PF00596 Class II Aldolase and Adducin N-terminal domain DWQ65_09530 PF00343 Carbohydrate phosphorylase DWQ65_09540 PF00483 Nucleotidyl transferase DWQ65_09555 PF01367 5'-3' exonuclease, C-terminal SAM fold DWQ65_09555 PF00476 DNA polymerase family A DWQ65_09555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DWQ65_09555 PF01612 3'-5' exonuclease DWQ65_09570 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DWQ65_09570 PF00703 Glycosyl hydrolases family 2 DWQ65_09570 PF02837 Glycosyl hydrolases family 2, sugar binding domain DWQ65_09570 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DWQ65_09580 PF03063 Prismane/CO dehydrogenase family DWQ65_09605 PF00919 Uncharacterized protein family UPF0004 DWQ65_09605 PF01938 TRAM domain DWQ65_09605 PF04055 Radical SAM superfamily DWQ65_09640 PF00248 Aldo/keto reductase family DWQ65_09665 PF00672 HAMP domain DWQ65_09665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_09670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_09670 PF08269 Cache domain DWQ65_09675 PF00571 CBS domain DWQ65_09675 PF03471 Transporter associated domain DWQ65_09675 PF01595 Cyclin M transmembrane N-terminal domain DWQ65_09680 PF00571 CBS domain DWQ65_09680 PF03471 Transporter associated domain DWQ65_09680 PF01595 Cyclin M transmembrane N-terminal domain DWQ65_09685 PF01081 KDPG and KHG aldolase DWQ65_09690 PF00294 pfkB family carbohydrate kinase DWQ65_09695 PF01301 Glycosyl hydrolases family 35 DWQ65_09695 PF01301 Glycosyl hydrolases family 35 DWQ65_09710 PF00990 Diguanylate cyclase, GGDEF domain DWQ65_09710 PF07694 5TMR of 5TMR-LYT DWQ65_09715 PF07694 5TMR of 5TMR-LYT DWQ65_09715 PF00990 Diguanylate cyclase, GGDEF domain DWQ65_09730 PF13416 Bacterial extracellular solute-binding protein DWQ65_09735 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_09740 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_09750 PF02719 Polysaccharide biosynthesis protein DWQ65_09765 PF17757 UvrB interaction domain DWQ65_09765 PF00271 Helicase conserved C-terminal domain DWQ65_09765 PF04851 Type III restriction enzyme, res subunit DWQ65_09765 PF02151 UvrB/uvrC motif DWQ65_09765 PF12344 Ultra-violet resistance protein B DWQ65_09775 PF08245 Mur ligase middle domain DWQ65_09775 PF02875 Mur ligase family, glutamate ligase domain DWQ65_09775 PF01225 Mur ligase family, catalytic domain DWQ65_09790 PF00633 Helix-hairpin-helix motif DWQ65_09790 PF00730 HhH-GPD superfamily base excision DNA repair protein DWQ65_09790 PF14815 NUDIX domain DWQ65_09795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_09795 PF02743 Cache domain DWQ65_09795 PF00672 HAMP domain DWQ65_09815 PF13476 AAA domain DWQ65_09820 PF00149 Calcineurin-like phosphoesterase DWQ65_09820 PF12320 Type 5 capsule protein repressor C-terminal domain DWQ65_09825 PF12729 Four helix bundle sensory module for signal transduction DWQ65_09825 PF00672 HAMP domain DWQ65_09825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_09835 PF01554 MatE DWQ65_09840 PF05746 DALR anticodon binding domain DWQ65_09840 PF03485 Arginyl tRNA synthetase N terminal domain DWQ65_09840 PF00750 tRNA synthetases class I (R) DWQ65_09845 PF01554 MatE DWQ65_09880 PF17674 HHH domain DWQ65_09880 PF00575 S1 RNA binding domain DWQ65_09880 PF09371 Tex-like protein N-terminal domain DWQ65_09880 PF16921 Tex protein YqgF-like domain DWQ65_09905 PF00919 Uncharacterized protein family UPF0004 DWQ65_09905 PF04055 Radical SAM superfamily DWQ65_09920 PF00171 Aldehyde dehydrogenase family DWQ65_09920 PF00465 Iron-containing alcohol dehydrogenase DWQ65_09930 PF18125 RlmM ferredoxin-like domain DWQ65_09930 PF01728 FtsJ-like methyltransferase DWQ65_09935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DWQ65_09935 PF03129 Anticodon binding domain DWQ65_09935 PF04073 Aminoacyl-tRNA editing domain DWQ65_09950 PF01728 FtsJ-like methyltransferase DWQ65_09965 PF01594 AI-2E family transporter DWQ65_09970 PF03807 NADP oxidoreductase coenzyme F420-dependent DWQ65_09970 PF14748 Pyrroline-5-carboxylate reductase dimerisation DWQ65_09980 PF03786 D-mannonate dehydratase (UxuA) DWQ65_09985 PF08125 Mannitol dehydrogenase C-terminal domain DWQ65_09985 PF01232 Mannitol dehydrogenase Rossmann domain DWQ65_09990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DWQ65_10000 PF03480 Bacterial extracellular solute-binding protein, family 7 DWQ65_10005 PF02614 Glucuronate isomerase DWQ65_10010 PF00703 Glycosyl hydrolases family 2 DWQ65_10010 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DWQ65_10010 PF02837 Glycosyl hydrolases family 2, sugar binding domain DWQ65_10020 PF00933 Glycosyl hydrolase family 3 N terminal domain DWQ65_10030 PF00455 DeoR C terminal sensor domain DWQ65_10030 PF08220 DeoR-like helix-turn-helix domain DWQ65_10055 PF01263 Aldose 1-epimerase DWQ65_10060 PF00749 tRNA synthetases class I (E and Q), catalytic domain DWQ65_10065 PF03129 Anticodon binding domain DWQ65_10065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DWQ65_10075 PF13186 Iron-sulfur cluster-binding domain DWQ65_10085 PF02348 Cytidylyltransferase DWQ65_10105 PF00005 ABC transporter DWQ65_10110 PF07687 Peptidase dimerisation domain DWQ65_10110 PF01546 Peptidase family M20/M25/M40 DWQ65_10115 PF00849 RNA pseudouridylate synthase DWQ65_10120 PF08245 Mur ligase middle domain DWQ65_10120 PF02875 Mur ligase family, glutamate ligase domain DWQ65_10120 PF01225 Mur ligase family, catalytic domain DWQ65_10130 PF01869 BadF/BadG/BcrA/BcrD ATPase family DWQ65_10135 PF00128 Alpha amylase, catalytic domain DWQ65_10135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DWQ65_10140 PF00005 ABC transporter DWQ65_10145 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_10155 PF00521 DNA gyrase/topoisomerase IV, subunit A DWQ65_10155 PF03989 DNA gyrase C-terminal domain, beta-propeller DWQ65_10160 PF00209 Sodium:neurotransmitter symporter family DWQ65_10165 PF01212 Beta-eliminating lyase DWQ65_10170 PF05258 Dna[CI] antecedent, DciA DWQ65_10175 PF02463 RecF/RecN/SMC N terminal domain DWQ65_10180 PF00712 DNA polymerase III beta subunit, N-terminal domain DWQ65_10180 PF02767 DNA polymerase III beta subunit, central domain DWQ65_10180 PF02768 DNA polymerase III beta subunit, C-terminal domain DWQ65_10185 PF11638 DnaA N-terminal domain DWQ65_10185 PF08299 Bacterial dnaA protein helix-turn-helix DWQ65_10185 PF00308 Bacterial dnaA protein DWQ65_10190 PF05437 Branched-chain amino acid transport protein (AzlD) DWQ65_10195 PF03591 AzlC protein DWQ65_10200 PF01170 Putative RNA methylase family UPF0020 DWQ65_10200 PF02926 THUMP domain DWQ65_10215 PF01661 Macro domain DWQ65_10220 PF01022 Bacterial regulatory protein, arsR family DWQ65_10225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DWQ65_10225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DWQ65_10230 PF02361 Cobalt transport protein DWQ65_10235 PF00005 ABC transporter DWQ65_10245 PF01653 NAD-dependent DNA ligase adenylation domain DWQ65_10245 PF00533 BRCA1 C Terminus (BRCT) domain DWQ65_10245 PF03120 NAD-dependent DNA ligase OB-fold domain DWQ65_10260 PF01926 50S ribosome-binding GTPase DWQ65_10260 PF16360 GTP-binding GTPase Middle Region DWQ65_10260 PF13167 GTP-binding GTPase N-terminal DWQ65_10270 PF01027 Inhibitor of apoptosis-promoting Bax1 DWQ65_10275 PF17760 UvrA interaction domain DWQ65_10275 PF17755 UvrA DNA-binding domain DWQ65_10275 PF00005 ABC transporter DWQ65_10285 PF00491 Arginase family DWQ65_10300 PF01592 NifU-like N terminal domain DWQ65_10305 PF00266 Aminotransferase class-V DWQ65_10310 PF01458 Uncharacterized protein family (UPF0051) DWQ65_10315 PF01458 Uncharacterized protein family (UPF0051) DWQ65_10320 PF00005 ABC transporter DWQ65_10350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DWQ65_10355 PF02653 Branched-chain amino acid transport system / permease component DWQ65_10360 PF02653 Branched-chain amino acid transport system / permease component DWQ65_10365 PF00005 ABC transporter DWQ65_10370 PF13407 Periplasmic binding protein domain DWQ65_10400 PF07516 SecA Wing and Scaffold domain DWQ65_10400 PF01043 SecA preprotein cross-linking domain DWQ65_10400 PF02810 SEC-C motif DWQ65_10400 PF07517 SecA DEAD-like domain DWQ65_10415 PF00005 ABC transporter DWQ65_10430 PF00497 Bacterial extracellular solute-binding proteins, family 3 DWQ65_10440 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_10445 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_10450 PF02056 Family 4 glycosyl hydrolase DWQ65_10450 PF11975 Family 4 glycosyl hydrolase C-terminal domain DWQ65_10480 PF00005 ABC transporter DWQ65_10480 PF12848 ABC transporter DWQ65_10485 PF04073 Aminoacyl-tRNA editing domain DWQ65_10490 PF13180 PDZ domain DWQ65_10490 PF03572 Peptidase family S41 DWQ65_10495 PF04452 RNA methyltransferase DWQ65_10505 PF02954 Bacterial regulatory protein, Fis family DWQ65_10505 PF06490 Flagellar regulatory protein FleQ DWQ65_10505 PF00158 Sigma-54 interaction domain DWQ65_10510 PF00588 SpoU rRNA Methylase family DWQ65_10525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DWQ65_10525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DWQ65_10540 PF04542 Sigma-70 region 2 DWQ65_10540 PF04545 Sigma-70, region 4 DWQ65_10540 PF04539 Sigma-70 region 3 DWQ65_10545 PF14804 Jag N-terminus DWQ65_10545 PF01424 R3H domain DWQ65_10570 PF03819 MazG nucleotide pyrophosphohydrolase domain DWQ65_10590 PF01252 Signal peptidase (SPase) II DWQ65_10595 PF01784 NIF3 (NGG1p interacting factor 3) DWQ65_10610 PF01168 Alanine racemase, N-terminal domain DWQ65_10630 PF02649 Type I GTP cyclohydrolase folE2 DWQ65_10635 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DWQ65_10635 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DWQ65_10640 PF13505 Outer membrane protein beta-barrel domain DWQ65_10650 PF16193 AAA C-terminal domain DWQ65_10650 PF00004 ATPase family associated with various cellular activities (AAA) DWQ65_10650 PF12002 MgsA AAA+ ATPase C terminal DWQ65_10660 PF00773 RNB domain DWQ65_10670 PF03610 PTS system fructose IIA component DWQ65_10670 PF05524 PEP-utilising enzyme, N-terminal DWQ65_10670 PF00391 PEP-utilising enzyme, mobile domain DWQ65_10670 PF00381 PTS HPr component phosphorylation site DWQ65_10675 PF02734 DAK2 domain DWQ65_10680 PF02733 Dak1 domain DWQ65_10705 PF00005 ABC transporter DWQ65_10725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DWQ65_10735 PF00111 2Fe-2S iron-sulfur cluster binding domain DWQ65_10735 PF01799 [2Fe-2S] binding domain DWQ65_10735 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DWQ65_10735 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DWQ65_10745 PF00753 Metallo-beta-lactamase superfamily DWQ65_10745 PF12706 Beta-lactamase superfamily domain DWQ65_10750 PF00919 Uncharacterized protein family UPF0004 DWQ65_10750 PF18693 TRAM domain DWQ65_10750 PF04055 Radical SAM superfamily DWQ65_10770 PF01636 Phosphotransferase enzyme family DWQ65_10785 PF00210 Ferritin-like domain DWQ65_10795 PF01871 AMMECR1 DWQ65_10795 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DWQ65_10805 PF00501 AMP-binding enzyme DWQ65_10810 PF07722 Peptidase C26 DWQ65_10815 PF02056 Family 4 glycosyl hydrolase DWQ65_10815 PF11975 Family 4 glycosyl hydrolase C-terminal domain DWQ65_10835 PF00892 EamA-like transporter family DWQ65_10840 PF01709 Transcriptional regulator DWQ65_10850 PF00586 AIR synthase related protein, N-terminal domain DWQ65_10850 PF02769 AIR synthase related protein, C-terminal domain DWQ65_10855 PF00551 Formyl transferase DWQ65_10860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_10860 PF00672 HAMP domain DWQ65_10860 PF12729 Four helix bundle sensory module for signal transduction DWQ65_10875 PF00005 ABC transporter DWQ65_10875 PF08402 TOBE domain DWQ65_10880 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_10885 PF08402 TOBE domain DWQ65_10885 PF00005 ABC transporter DWQ65_10890 PF00953 Glycosyl transferase family 4 DWQ65_10895 PF00899 ThiF family DWQ65_10910 PF08279 HTH domain DWQ65_10910 PF13280 WYL domain DWQ65_11005 PF01520 N-acetylmuramoyl-L-alanine amidase DWQ65_11040 PF00691 OmpA family DWQ65_11045 PF00005 ABC transporter DWQ65_11050 PF01032 FecCD transport family DWQ65_11055 PF01032 FecCD transport family DWQ65_11065 PF00005 ABC transporter DWQ65_11085 PF03773 Predicted permease DWQ65_11100 PF14572 Phosphoribosyl synthetase-associated domain DWQ65_11100 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DWQ65_11130 PF00005 ABC transporter DWQ65_11130 PF12399 Branched-chain amino acid ATP-binding cassette transporter DWQ65_11145 PF03837 RecT family DWQ65_11165 PF09588 YqaJ-like viral recombinase domain DWQ65_11180 PF00664 ABC transporter transmembrane region DWQ65_11180 PF00005 ABC transporter DWQ65_11185 PF00005 ABC transporter DWQ65_11185 PF00664 ABC transporter transmembrane region DWQ65_11190 PF07364 Metallopeptidase family M81 DWQ65_11190 PF07171 MlrC C-terminus DWQ65_11195 PF03932 CutC family DWQ65_11200 PF00857 Isochorismatase family DWQ65_11220 PF17871 AAA lid domain DWQ65_11220 PF07724 AAA domain (Cdc48 subfamily) DWQ65_11220 PF02861 Clp amino terminal domain, pathogenicity island component DWQ65_11220 PF00004 ATPase family associated with various cellular activities (AAA) DWQ65_11220 PF10431 C-terminal, D2-small domain, of ClpB protein DWQ65_11225 PF02075 Crossover junction endodeoxyribonuclease RuvC DWQ65_11240 PF00171 Aldehyde dehydrogenase family DWQ65_11250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DWQ65_11250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DWQ65_11270 PF00005 ABC transporter DWQ65_11275 PF12683 Protein of unknown function (DUF3798) DWQ65_11295 PF01330 RuvA N terminal domain DWQ65_11300 PF01636 Phosphotransferase enzyme family DWQ65_11310 PF02683 Cytochrome C biogenesis protein transmembrane region DWQ65_11315 PF00578 AhpC/TSA family DWQ65_11325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_11325 PF00672 HAMP domain DWQ65_11325 PF02743 Cache domain DWQ65_11335 PF02743 Cache domain DWQ65_11335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_11335 PF00672 HAMP domain DWQ65_11350 PF04205 FMN-binding domain DWQ65_11350 PF00890 FAD binding domain DWQ65_11350 PF03358 NADPH-dependent FMN reductase DWQ65_11355 PF02237 Biotin protein ligase C terminal domain DWQ65_11355 PF08279 HTH domain DWQ65_11355 PF03099 Biotin/lipoate A/B protein ligase family DWQ65_11365 PF00365 Phosphofructokinase DWQ65_11375 PF00005 ABC transporter DWQ65_11375 PF08402 TOBE domain DWQ65_11385 PF01547 Bacterial extracellular solute-binding protein DWQ65_11395 PF02424 ApbE family DWQ65_11445 PF01609 Transposase DDE domain DWQ65_11445 PF13808 DDE_Tnp_1-associated DWQ65_11455 PF12705 PD-(D/E)XK nuclease superfamily DWQ65_11455 PF13361 UvrD-like helicase C-terminal domain DWQ65_11455 PF00580 UvrD/REP helicase N-terminal domain DWQ65_11460 PF12705 PD-(D/E)XK nuclease superfamily DWQ65_11475 PF13276 HTH-like domain DWQ65_11475 PF13333 Integrase core domain DWQ65_11475 PF00665 Integrase core domain DWQ65_11485 PF01339 CheB methylesterase DWQ65_11485 PF00072 Response regulator receiver domain DWQ65_11490 PF01739 CheR methyltransferase, SAM binding domain DWQ65_11490 PF03705 CheR methyltransferase, all-alpha domain DWQ65_11505 PF13545 Crp-like helix-turn-helix domain DWQ65_11505 PF00027 Cyclic nucleotide-binding domain DWQ65_11510 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DWQ65_11510 PF01565 FAD binding domain DWQ65_11515 PF01406 tRNA synthetases class I (C) catalytic domain DWQ65_11515 PF09190 DALR domain DWQ65_11530 PF01841 Transglutaminase-like superfamily DWQ65_11535 PF00696 Amino acid kinase family DWQ65_11540 PF00684 DnaJ central domain DWQ65_11540 PF01556 DnaJ C terminal domain DWQ65_11540 PF00226 DnaJ domain DWQ65_11545 PF01176 Translation initiation factor 1A / IF-1 DWQ65_11550 PF01258 Prokaryotic dksA/traR C4-type zinc finger DWQ65_11555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DWQ65_11555 PF00072 Response regulator receiver domain DWQ65_11555 PF01627 Hpt domain DWQ65_11555 PF00512 His Kinase A (phospho-acceptor) domain DWQ65_11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DWQ65_11555 PF00672 HAMP domain DWQ65_11560 PF13176 Tetratricopeptide repeat DWQ65_11560 PF13174 Tetratricopeptide repeat DWQ65_11565 PF01515 Phosphate acetyl/butaryl transferase DWQ65_11575 PF00588 SpoU rRNA Methylase family DWQ65_11575 PF08032 RNA 2'-O ribose methyltransferase substrate binding DWQ65_11580 PF10996 Beta-Casp domain DWQ65_11580 PF00753 Metallo-beta-lactamase superfamily DWQ65_11580 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DWQ65_11590 PF00478 IMP dehydrogenase / GMP reductase domain DWQ65_11590 PF00571 CBS domain DWQ65_11615 PF17239 Family of unknown function (DUF5312) DWQ65_11630 PF12146 Serine aminopeptidase, S33 DWQ65_11640 PF03330 Lytic transglycolase DWQ65_11650 PF01026 TatD related DNase DWQ65_11655 PF01066 CDP-alcohol phosphatidyltransferase DWQ65_11660 PF00085 Thioredoxin DWQ65_11665 PF00027 Cyclic nucleotide-binding domain DWQ65_11665 PF13545 Crp-like helix-turn-helix domain DWQ65_11685 PF01520 N-acetylmuramoyl-L-alanine amidase DWQ65_11695 PF04620 Flagellar filament outer layer protein Flaa DWQ65_11700 PF04607 Region found in RelA / SpoT proteins DWQ65_11705 PF01649 Ribosomal protein S20 DWQ65_11710 PF00216 Bacterial DNA-binding protein DWQ65_11720 PF00795 Carbon-nitrogen hydrolase DWQ65_11730 PF02464 Competence-damaged protein DWQ65_11730 PF18146 Damage-inducible protein CinA KH domain DWQ65_11730 PF00994 Probable molybdopterin binding domain DWQ65_11735 PF07498 Rho termination factor, N-terminal domain DWQ65_11735 PF07497 Rho termination factor, RNA-binding domain DWQ65_11735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DWQ65_11740 PF01197 Ribosomal protein L31 DWQ65_11755 PF02887 Pyruvate kinase, alpha/beta domain DWQ65_11755 PF00224 Pyruvate kinase, barrel domain DWQ65_11755 PF00391 PEP-utilising enzyme, mobile domain DWQ65_11770 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_11775 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_11790 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_11795 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_11810 PF00885 6,7-dimethyl-8-ribityllumazine synthase DWQ65_11815 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DWQ65_11815 PF00925 GTP cyclohydrolase II DWQ65_11825 PF00677 Lumazine binding domain DWQ65_11830 PF01872 RibD C-terminal domain DWQ65_11830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DWQ65_11840 PF04552 Sigma-54, DNA binding domain DWQ65_11840 PF04963 Sigma-54 factor, core binding domain DWQ65_11840 PF00309 Sigma-54 factor, Activator interacting domain (AID) DWQ65_11855 PF00436 Single-strand binding protein family DWQ65_11860 PF00365 Phosphofructokinase DWQ65_11870 PF00293 NUDIX domain DWQ65_11885 PF08239 Bacterial SH3 domain DWQ65_11890 PF12848 ABC transporter DWQ65_11890 PF16326 ABC transporter C-terminal domain DWQ65_11890 PF00005 ABC transporter DWQ65_11895 PF13735 tRNA nucleotidyltransferase domain 2 putative DWQ65_11895 PF12627 Probable RNA and SrmB- binding site of polymerase A DWQ65_11895 PF01743 Poly A polymerase head domain DWQ65_11900 PF02542 YgbB family DWQ65_11905 PF02542 YgbB family DWQ65_11905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DWQ65_11920 PF16658 Class II release factor RF3, C-terminal domain DWQ65_11920 PF03144 Elongation factor Tu domain 2 DWQ65_11920 PF00009 Elongation factor Tu GTP binding domain DWQ65_11930 PF01175 Urocanase Rossmann-like domain DWQ65_11930 PF17391 Urocanase N-terminal domain DWQ65_11930 PF17392 Urocanase C-terminal domain DWQ65_11945 PF01343 Peptidase family S49 DWQ65_11950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DWQ65_11950 PF02403 Seryl-tRNA synthetase N-terminal domain DWQ65_11955 PF10502 Signal peptidase, peptidase S26 DWQ65_11970 PF14353 CpXC protein DWQ65_11975 PF17820 PDZ domain DWQ65_11975 PF02163 Peptidase family M50 DWQ65_11980 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DWQ65_11980 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DWQ65_11980 PF13288 DXP reductoisomerase C-terminal domain DWQ65_11990 PF01255 Putative undecaprenyl diphosphate synthase DWQ65_11995 PF01765 Ribosome recycling factor DWQ65_12000 PF00889 Elongation factor TS DWQ65_12005 PF00318 Ribosomal protein S2 DWQ65_12015 PF13533 Biotin-lipoyl like DWQ65_12020 PF00005 ABC transporter DWQ65_12025 PF12704 MacB-like periplasmic core domain DWQ65_12025 PF02687 FtsX-like permease family DWQ65_12030 PF02687 FtsX-like permease family DWQ65_12030 PF12704 MacB-like periplasmic core domain DWQ65_12035 PF00270 DEAD/DEAH box helicase DWQ65_12035 PF00271 Helicase conserved C-terminal domain DWQ65_12040 PF00005 ABC transporter DWQ65_12060 PF07730 Histidine kinase DWQ65_12080 PF00005 ABC transporter DWQ65_12085 PF00512 His Kinase A (phospho-acceptor) domain DWQ65_12085 PF00672 HAMP domain DWQ65_12085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DWQ65_12090 PF00072 Response regulator receiver domain DWQ65_12090 PF00486 Transcriptional regulatory protein, C terminal DWQ65_12095 PF01434 Peptidase family M41 DWQ65_12095 PF17862 AAA+ lid domain DWQ65_12095 PF00004 ATPase family associated with various cellular activities (AAA) DWQ65_12105 PF07670 Nucleoside recognition DWQ65_12105 PF07664 Ferrous iron transport protein B C terminus DWQ65_12105 PF17910 FeoB cytosolic helical domain DWQ65_12105 PF02421 Ferrous iron transport protein B DWQ65_12135 PF00708 Acylphosphatase DWQ65_12170 PF02743 Cache domain DWQ65_12170 PF00672 HAMP domain DWQ65_12170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_12190 PF00886 Ribosomal protein S16 DWQ65_12200 PF01782 RimM N-terminal domain DWQ65_12205 PF01746 tRNA (Guanine-1)-methyltransferase DWQ65_12210 PF01245 Ribosomal protein L19 DWQ65_12220 PF01312 FlhB HrpN YscU SpaS Family DWQ65_12225 PF01966 HD domain DWQ65_12225 PF11871 Domain of unknown function (DUF3391) DWQ65_12230 PF02021 Uncharacterised protein family UPF0102 DWQ65_12260 PF13361 UvrD-like helicase C-terminal domain DWQ65_12260 PF00580 UvrD/REP helicase N-terminal domain DWQ65_12265 PF00209 Sodium:neurotransmitter symporter family DWQ65_12285 PF03313 Serine dehydratase alpha chain DWQ65_12295 PF00156 Phosphoribosyl transferase domain DWQ65_12305 PF00348 Polyprenyl synthetase DWQ65_12310 PF00356 Bacterial regulatory proteins, lacI family DWQ65_12315 PF04041 beta-1,4-mannooligosaccharide phosphorylase DWQ65_12325 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_12330 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_12335 PF02028 BCCT, betaine/carnitine/choline family transporter DWQ65_12345 PF01609 Transposase DDE domain DWQ65_12350 PF00221 Aromatic amino acid lyase DWQ65_12355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DWQ65_12355 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DWQ65_12355 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DWQ65_12355 PF10371 Domain of unknown function DWQ65_12355 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DWQ65_12360 PF01053 Cys/Met metabolism PLP-dependent enzyme DWQ65_12365 PF13291 ACT domain DWQ65_12365 PF00291 Pyridoxal-phosphate dependent enzyme DWQ65_12370 PF00375 Sodium:dicarboxylate symporter family DWQ65_12380 PF00005 ABC transporter DWQ65_12380 PF00664 ABC transporter transmembrane region DWQ65_12385 PF02810 SEC-C motif DWQ65_12385 PF07517 SecA DEAD-like domain DWQ65_12385 PF01043 SecA preprotein cross-linking domain DWQ65_12385 PF07516 SecA Wing and Scaffold domain DWQ65_12405 PF01740 STAS domain DWQ65_12420 PF17863 AAA lid domain DWQ65_12420 PF07726 ATPase family associated with various cellular activities (AAA) DWQ65_12435 PF02080 TrkA-C domain DWQ65_12435 PF02254 TrkA-N domain DWQ65_12440 PF02386 Cation transport protein DWQ65_12445 PF00144 Beta-lactamase DWQ65_12450 PF07075 Protein of unknown function (DUF1343) DWQ65_12455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DWQ65_12455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DWQ65_12465 PF08281 Sigma-70, region 4 DWQ65_12465 PF04542 Sigma-70 region 2 DWQ65_12485 PF02743 Cache domain DWQ65_12485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_12485 PF00672 HAMP domain DWQ65_12500 PF01584 CheW-like domain DWQ65_12505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DWQ65_12510 PF01513 ATP-NAD kinase DWQ65_12515 PF02463 RecF/RecN/SMC N terminal domain DWQ65_12530 PF01569 PAP2 superfamily DWQ65_12535 PF01926 50S ribosome-binding GTPase DWQ65_12535 PF12631 MnmE helical domain DWQ65_12535 PF10396 GTP-binding protein TrmE N-terminus DWQ65_12540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DWQ65_12545 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_12550 PF12911 N-terminal TM domain of oligopeptide transport permease C DWQ65_12550 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_12555 PF00005 ABC transporter DWQ65_12555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DWQ65_12560 PF00005 ABC transporter DWQ65_12560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DWQ65_12575 PF00572 Ribosomal protein L13 DWQ65_12580 PF00380 Ribosomal protein S9/S16 DWQ65_12585 PF02631 RecX family DWQ65_12590 PF00072 Response regulator receiver domain DWQ65_12595 PF01609 Transposase DDE domain DWQ65_12600 PF01554 MatE DWQ65_12605 PF08534 Redoxin DWQ65_12615 PF02223 Thymidylate kinase DWQ65_12625 PF07244 Surface antigen variable number repeat DWQ65_12625 PF01103 Surface antigen DWQ65_12635 PF01624 MutS domain I DWQ65_12635 PF05188 MutS domain II DWQ65_12635 PF05192 MutS domain III DWQ65_12635 PF05190 MutS family domain IV DWQ65_12635 PF00488 MutS domain V DWQ65_12650 PF03611 PTS system sugar-specific permease component DWQ65_12655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DWQ65_12660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DWQ65_12660 PF00381 PTS HPr component phosphorylation site DWQ65_12665 PF02896 PEP-utilising enzyme, TIM barrel domain DWQ65_12665 PF00391 PEP-utilising enzyme, mobile domain DWQ65_12665 PF05524 PEP-utilising enzyme, N-terminal DWQ65_12670 PF00596 Class II Aldolase and Adducin N-terminal domain DWQ65_12675 PF01261 Xylose isomerase-like TIM barrel DWQ65_12685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DWQ65_12695 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_12700 PF00528 Binding-protein-dependent transport system inner membrane component DWQ65_12705 PF00270 DEAD/DEAH box helicase DWQ65_12705 PF00271 Helicase conserved C-terminal domain DWQ65_12705 PF00570 HRDC domain DWQ65_12705 PF16124 RecQ zinc-binding DWQ65_12705 PF09382 RQC domain DWQ65_12730 PF14492 Elongation Factor G, domain II DWQ65_12730 PF03764 Elongation factor G, domain IV DWQ65_12730 PF00679 Elongation factor G C-terminus DWQ65_12730 PF03144 Elongation factor Tu domain 2 DWQ65_12730 PF00009 Elongation factor Tu GTP binding domain DWQ65_12740 PF00768 D-alanyl-D-alanine carboxypeptidase DWQ65_12740 PF07943 Penicillin-binding protein 5, C-terminal domain DWQ65_12745 PF02838 Glycosyl hydrolase family 20, domain 2 DWQ65_12745 PF00728 Glycosyl hydrolase family 20, catalytic domain DWQ65_12750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_12750 PF00672 HAMP domain DWQ65_12750 PF02743 Cache domain DWQ65_12755 PF12072 Domain of unknown function (DUF3552) DWQ65_12755 PF00013 KH domain DWQ65_12755 PF01966 HD domain DWQ65_12760 PF00834 Ribulose-phosphate 3 epimerase family DWQ65_12790 PF01973 Protein of unknown function DUF115 DWQ65_12795 PF01973 Protein of unknown function DUF115 DWQ65_12810 PF04977 Septum formation initiator DWQ65_12815 PF01300 Telomere recombination DWQ65_12820 PF12729 Four helix bundle sensory module for signal transduction DWQ65_12820 PF00672 HAMP domain DWQ65_12820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_12835 PF12729 Four helix bundle sensory module for signal transduction DWQ65_12835 PF00672 HAMP domain DWQ65_12835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DWQ65_12840 PF01192 RNA polymerase Rpb6 DWQ65_12850 PF13458 Periplasmic binding protein DWQ65_12855 PF02653 Branched-chain amino acid transport system / permease component DWQ65_12860 PF11862 Domain of unknown function (DUF3382) DWQ65_12860 PF02653 Branched-chain amino acid transport system / permease component DWQ65_12865 PF12399 Branched-chain amino acid ATP-binding cassette transporter DWQ65_12865 PF00005 ABC transporter DWQ65_12870 PF00005 ABC transporter DWQ65_12875 PF00571 CBS domain DWQ65_12885 PF00183 Hsp90 protein DWQ65_12895 PF00933 Glycosyl hydrolase family 3 N terminal domain DWQ65_12905 PF02616 Segregation and condensation protein ScpA DWQ65_12910 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DWQ65_12915 PF00154 recA bacterial DNA recombination protein DWQ65_12930 PF00106 short chain dehydrogenase DWQ65_12940 PF01979 Amidohydrolase family DWQ65_12945 PF17820 PDZ domain DWQ65_12945 PF13180 PDZ domain DWQ65_12960 PF00111 2Fe-2S iron-sulfur cluster binding domain DWQ65_12960 PF01799 [2Fe-2S] binding domain DWQ65_12965 PF00941 FAD binding domain in molybdopterin dehydrogenase DWQ65_12965 PF03450 CO dehydrogenase flavoprotein C-terminal domain DWQ65_12970 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DWQ65_12970 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DWQ65_12975 PF04002 RadC-like JAB domain