TREPR_0034 SM01007 Class II Aldolase and Adducin N-terminal domain TREPR_0045 SM00710 Parallel beta-helix repeats TREPR_0046 SM00710 Parallel beta-helix repeats TREPR_0049 SM00382 ATPases associated with a variety of cellular activities TREPR_0050 SM00530 Helix-turn-helix XRE-family like proteins TREPR_0052 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_0052 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_0055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_0060 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TREPR_0060 SM00245 tail specific protease TREPR_0078 SM00387 Histidine kinase-like ATPases TREPR_0078 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0078 SM00448 cheY-homologous receiver domain TREPR_0081 SM00354 helix_turn _helix lactose operon repressor TREPR_0085 SM00382 ATPases associated with a variety of cellular activities TREPR_0108 SM00382 ATPases associated with a variety of cellular activities TREPR_0120 SM01018 B12 binding domain TREPR_0122 SM00327 von Willebrand factor (vWF) type A domain TREPR_0131 SM00420 helix_turn_helix, Deoxyribose operon repressor TREPR_0131 SM01134 TREPR_0131 TREPR_0132 SM00420 helix_turn_helix, Deoxyribose operon repressor TREPR_0132 SM01134 TREPR_0132 TREPR_0134 SM00829 Enoylreductase TREPR_0136 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TREPR_0145 SM00474 3'-5' exonuclease TREPR_0154 SM00382 ATPases associated with a variety of cellular activities TREPR_0158 SM00530 Helix-turn-helix XRE-family like proteins TREPR_0161 SM00387 Histidine kinase-like ATPases TREPR_0161 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0162 SM00382 ATPases associated with a variety of cellular activities TREPR_0162 SM00448 cheY-homologous receiver domain TREPR_0171 SM00382 ATPases associated with a variety of cellular activities TREPR_0174 SM00563 Phosphate acyltransferases TREPR_0180 SM00028 Tetratricopeptide repeats TREPR_0180 SM00460 Transglutaminase/protease-like homologues TREPR_0183 SM00387 Histidine kinase-like ATPases TREPR_0183 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0183 SM00448 cheY-homologous receiver domain TREPR_0184 SM00267 diguanylate cyclase TREPR_0219 SM00788 Adenylosuccinate synthetase TREPR_0226 SM00116 Domain in cystathionine beta-synthase and other proteins. TREPR_0226 SM01240 TREPR_0226 TREPR_0227 SM00998 Adenylosuccinate lyase C-terminus TREPR_0234 SM00382 ATPases associated with a variety of cellular activities TREPR_0241 SM00642 Alpha-amylase domain TREPR_0252 SM00382 ATPases associated with a variety of cellular activities TREPR_0258 SM00232 JAB/MPN domain TREPR_0262 SM01004 Delta-aminolevulinic acid dehydratase TREPR_0265 SM00354 helix_turn _helix lactose operon repressor TREPR_0268 SM00382 ATPases associated with a variety of cellular activities TREPR_0275 SM00480 DNA polymerase III beta subunit TREPR_0277 SM00382 ATPases associated with a variety of cellular activities TREPR_0277 SM00760 Bacterial dnaA protein helix-turn-helix domain TREPR_0279 SM00387 Histidine kinase-like ATPases TREPR_0279 SM00433 TopoisomeraseII TREPR_0280 SM00387 Histidine kinase-like ATPases TREPR_0280 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0280 SM00448 cheY-homologous receiver domain TREPR_0281 SM00267 diguanylate cyclase TREPR_0282 SM00434 DNA Topoisomerase IV TREPR_0284 SM00382 ATPases associated with a variety of cellular activities TREPR_0298 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TREPR_0298 SM01080 TREPR_0298 TREPR_0300 SM00287 Bacterial SH3 domain homologues TREPR_0301 SM00967 RNA 2'-O ribose methyltransferase substrate binding TREPR_0303 SM00849 Metallo-beta-lactamase superfamily TREPR_0303 SM01027 Beta-Casp domain TREPR_0308 SM00900 TREPR_0308 TREPR_0311 SM00271 DnaJ molecular chaperone homology domain TREPR_0318 SM00382 ATPases associated with a variety of cellular activities TREPR_0335 SM00861 Transketolase, pyrimidine binding domain TREPR_0345 SM00984 UDP binding domain TREPR_0377 SM00028 Tetratricopeptide repeats TREPR_0393 SM00919 Malic enzyme, NAD binding domain TREPR_0393 SM01274 TREPR_0393 TREPR_0394 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TREPR_0401 SM00354 helix_turn _helix lactose operon repressor TREPR_0402 SM00382 ATPases associated with a variety of cellular activities TREPR_0405 SM00354 helix_turn _helix lactose operon repressor TREPR_0407 SM00861 Transketolase, pyrimidine binding domain TREPR_0410 SM00487 DEAD-like helicases superfamily TREPR_0410 SM00490 helicase superfamily c-terminal domain TREPR_0419 SM00014 Acid phosphatase homologues TREPR_0430 SM00382 ATPases associated with a variety of cellular activities TREPR_0435 SM00382 ATPases associated with a variety of cellular activities TREPR_0436 SM00382 ATPases associated with a variety of cellular activities TREPR_0440 SM00382 ATPases associated with a variety of cellular activities TREPR_0441 SM00382 ATPases associated with a variety of cellular activities TREPR_0447 SM00382 ATPases associated with a variety of cellular activities TREPR_0449 SM00493 TREPR_0449 TREPR_0451 SM00421 helix_turn_helix, Lux Regulon TREPR_0451 SM00448 cheY-homologous receiver domain TREPR_0454 SM00267 diguanylate cyclase TREPR_0455 SM01160 TREPR_0455 TREPR_0465 SM00382 ATPases associated with a variety of cellular activities TREPR_0476 SM00382 ATPases associated with a variety of cellular activities TREPR_0477 SM00382 ATPases associated with a variety of cellular activities TREPR_0483 SM00873 B3/4 domain TREPR_0483 SM00874 tRNA synthetase B5 domain TREPR_0493 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_0493 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_0494 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_0494 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_0495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_0495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_0498 SM00981 TREPR_0498 TREPR_0502 SM00393 Putative single-stranded nucleic acids-binding domain TREPR_0502 SM01245 TREPR_0502 TREPR_0504 SM01234 TREPR_0504 TREPR_0533 SM00382 ATPases associated with a variety of cellular activities TREPR_0540 SM00382 ATPases associated with a variety of cellular activities TREPR_0556 SM00382 ATPases associated with a variety of cellular activities TREPR_0557 SM00530 Helix-turn-helix XRE-family like proteins TREPR_0562 SM01266 TREPR_0562 TREPR_0565 SM00342 helix_turn_helix, arabinose operon control protein TREPR_0567 SM00382 ATPases associated with a variety of cellular activities TREPR_0581 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_0581 SM00387 Histidine kinase-like ATPases TREPR_0581 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0582 SM00448 cheY-homologous receiver domain TREPR_0582 SM00862 Transcriptional regulatory protein, C terminal TREPR_0595 SM00345 helix_turn_helix gluconate operon transcriptional repressor TREPR_0595 SM00895 TREPR_0595 TREPR_0607 SM00967 RNA 2'-O ribose methyltransferase substrate binding TREPR_0611 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_0612 SM00562 TREPR_0612 TREPR_0615 SM00382 ATPases associated with a variety of cellular activities TREPR_0615 SM00962 SRP54-type protein, GTPase domain TREPR_0615 SM00963 SRP54-type protein, helical bundle domain TREPR_0616 SM00091 PAS domain TREPR_0616 SM00387 Histidine kinase-like ATPases TREPR_0616 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0616 SM00448 cheY-homologous receiver domain TREPR_0617 SM00364 Leucine-rich repeats, bacterial type TREPR_0617 SM00369 Leucine-rich repeats, typical (most populated) subfamily TREPR_0622 SM00506 Appr-1"-p processing enzyme TREPR_0638 SM00382 ATPases associated with a variety of cellular activities TREPR_0638 SM01086 C-terminal, D2-small domain, of ClpB protein TREPR_0641 SM00481 DNA polymerase alpha chain like domain TREPR_0648 SM00487 DEAD-like helicases superfamily TREPR_0648 SM00490 helicase superfamily c-terminal domain TREPR_0651 SM00354 helix_turn _helix lactose operon repressor TREPR_0659 SM00382 ATPases associated with a variety of cellular activities TREPR_0665 SM00845 GatB domain TREPR_0665 SM00870 TREPR_0665 TREPR_0674 SM00382 ATPases associated with a variety of cellular activities TREPR_0675 SM00382 ATPases associated with a variety of cellular activities TREPR_0684 SM00382 ATPases associated with a variety of cellular activities TREPR_0684 SM00448 cheY-homologous receiver domain TREPR_0685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_0685 SM00387 Histidine kinase-like ATPases TREPR_0685 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0692 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_0696 SM01204 TREPR_0696 TREPR_0698 SM00387 Histidine kinase-like ATPases TREPR_0698 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0698 SM00448 cheY-homologous receiver domain TREPR_0699 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_0699 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_0705 SM00382 ATPases associated with a variety of cellular activities TREPR_0706 SM00382 ATPases associated with a variety of cellular activities TREPR_0714 SM00257 Lysin motif TREPR_0722 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_0724 SM00382 ATPases associated with a variety of cellular activities TREPR_0726 SM00382 ATPases associated with a variety of cellular activities TREPR_0728 SM00382 ATPases associated with a variety of cellular activities TREPR_0748 SM00476 deoxyribonuclease I TREPR_0755 SM01018 B12 binding domain TREPR_0764 SM00360 RNA recognition motif TREPR_0776 SM01192 TREPR_0776 TREPR_0776 SM01193 TREPR_0776 TREPR_0781 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TREPR_0795 SM00382 ATPases associated with a variety of cellular activities TREPR_0808 SM00382 ATPases associated with a variety of cellular activities TREPR_0811 SM00369 Leucine-rich repeats, typical (most populated) subfamily TREPR_0812 SM00849 Metallo-beta-lactamase superfamily TREPR_0817 SM00487 DEAD-like helicases superfamily TREPR_0827 SM00382 ATPases associated with a variety of cellular activities TREPR_0828 SM00382 ATPases associated with a variety of cellular activities TREPR_0833 SM00382 ATPases associated with a variety of cellular activities TREPR_0833 SM00930 TREPR_0833 TREPR_0838 SM00642 Alpha-amylase domain TREPR_0840 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_0851 SM00854 Bacterial capsule synthesis protein PGA_cap TREPR_0855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TREPR_0855 SM00387 Histidine kinase-like ATPases TREPR_0855 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0855 SM00448 cheY-homologous receiver domain TREPR_0857 SM00563 Phosphate acyltransferases TREPR_0864 SM01321 TREPR_0864 TREPR_0882 SM00530 Helix-turn-helix XRE-family like proteins TREPR_0889 SM00382 ATPases associated with a variety of cellular activities TREPR_0900 SM00382 ATPases associated with a variety of cellular activities TREPR_0904 SM00481 DNA polymerase alpha chain like domain TREPR_0912 SM00470 ParB-like nuclease domain TREPR_0917 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_0917 SM00387 Histidine kinase-like ATPases TREPR_0917 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0917 SM00448 cheY-homologous receiver domain TREPR_0925 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TREPR_0925 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TREPR_0926 SM00649 Ribosomal protein L11/L12 TREPR_0931 SM00663 RNA polymerase I subunit A N-terminus TREPR_0932 SM00382 ATPases associated with a variety of cellular activities TREPR_0933 SM00382 ATPases associated with a variety of cellular activities TREPR_0953 SM00382 ATPases associated with a variety of cellular activities TREPR_0955 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_0962 SM00382 ATPases associated with a variety of cellular activities TREPR_0963 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_0968 SM00530 Helix-turn-helix XRE-family like proteins TREPR_0969 SM00387 Histidine kinase-like ATPases TREPR_0969 SM00388 His Kinase A (phosphoacceptor) domain TREPR_0969 SM00448 cheY-homologous receiver domain TREPR_0979 SM01329 TREPR_0979 TREPR_0980 SM00917 LeuA allosteric (dimerisation) domain TREPR_0981 SM00917 LeuA allosteric (dimerisation) domain TREPR_0986 SM00267 diguanylate cyclase TREPR_0991 SM00421 helix_turn_helix, Lux Regulon TREPR_1002 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain TREPR_1016 SM01264 TREPR_1016 TREPR_1019 SM00487 DEAD-like helicases superfamily TREPR_1019 SM00490 helicase superfamily c-terminal domain TREPR_1023 SM01058 CarD-like/TRCF domain TREPR_1026 SM00478 endonuclease III TREPR_1040 SM00530 Helix-turn-helix XRE-family like proteins TREPR_1054 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_1054 SM00387 Histidine kinase-like ATPases TREPR_1054 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1054 SM00448 cheY-homologous receiver domain TREPR_1062 SM00382 ATPases associated with a variety of cellular activities TREPR_1068 SM00100 Cyclic nucleotide-monophosphate binding domain TREPR_1070 SM01211 TREPR_1070 TREPR_1079 SM01228 TREPR_1079 TREPR_1081 SM00014 Acid phosphatase homologues TREPR_1101 SM00465 GIY-YIG type nucleases (URI domain) TREPR_1102 SM00060 Fibronectin type 3 domain TREPR_1103 SM00028 Tetratricopeptide repeats TREPR_1104 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_1125 SM00382 ATPases associated with a variety of cellular activities TREPR_1126 SM00382 ATPases associated with a variety of cellular activities TREPR_1127 SM00116 Domain in cystathionine beta-synthase and other proteins. TREPR_1128 SM00382 ATPases associated with a variety of cellular activities TREPR_1134 SM00060 Fibronectin type 3 domain TREPR_1135 SM00635 Bacterial Ig-like domain 2 TREPR_1141 SM00382 ATPases associated with a variety of cellular activities TREPR_1180 SM00740 TREPR_1180 TREPR_1182 SM00487 DEAD-like helicases superfamily TREPR_1182 SM00490 helicase superfamily c-terminal domain TREPR_1189 SM00710 Parallel beta-helix repeats TREPR_1193 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_1196 SM00966 SpoVT / AbrB like domain TREPR_1201 SM00382 ATPases associated with a variety of cellular activities TREPR_1203 SM00347 helix_turn_helix multiple antibiotic resistance protein TREPR_1218 SM00271 DnaJ molecular chaperone homology domain TREPR_1220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TREPR_1221 SM00858 TREPR_1221 TREPR_1222 SM00530 Helix-turn-helix XRE-family like proteins TREPR_1224 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_1226 SM00852 Probable molybdopterin binding domain TREPR_1236 SM00382 ATPases associated with a variety of cellular activities TREPR_1249 SM00387 Histidine kinase-like ATPases TREPR_1249 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1249 SM00448 cheY-homologous receiver domain TREPR_1250 SM00387 Histidine kinase-like ATPases TREPR_1250 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1250 SM00448 cheY-homologous receiver domain TREPR_1251 SM00387 Histidine kinase-like ATPases TREPR_1251 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1251 SM00448 cheY-homologous receiver domain TREPR_1254 SM00387 Histidine kinase-like ATPases TREPR_1254 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1254 SM00448 cheY-homologous receiver domain TREPR_1255 SM00387 Histidine kinase-like ATPases TREPR_1255 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1255 SM00448 cheY-homologous receiver domain TREPR_1256 SM00387 Histidine kinase-like ATPases TREPR_1256 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1256 SM00448 cheY-homologous receiver domain TREPR_1257 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TREPR_1257 SM00448 cheY-homologous receiver domain TREPR_1258 SM00387 Histidine kinase-like ATPases TREPR_1258 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1258 SM00448 cheY-homologous receiver domain TREPR_1260 SM00387 Histidine kinase-like ATPases TREPR_1260 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1260 SM00448 cheY-homologous receiver domain TREPR_1261 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TREPR_1261 SM00448 cheY-homologous receiver domain TREPR_1263 SM00530 Helix-turn-helix XRE-family like proteins TREPR_1265 SM00893 Electron transfer flavoprotein domain TREPR_1266 SM00893 Electron transfer flavoprotein domain TREPR_1270 SM00878 Biotin carboxylase C-terminal domain TREPR_1277 SM00825 Beta-ketoacyl synthase TREPR_1278 SM00822 TREPR_1278 TREPR_1279 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TREPR_1289 SM00764 Citrate lyase ligase C-terminal domain TREPR_1290 SM00028 Tetratricopeptide repeats TREPR_1290 SM00671 Sel1-like repeats. TREPR_1291 SM00487 DEAD-like helicases superfamily TREPR_1291 SM00490 helicase superfamily c-terminal domain TREPR_1298 SM00345 helix_turn_helix gluconate operon transcriptional repressor TREPR_1310 SM00861 Transketolase, pyrimidine binding domain TREPR_1317 SM00345 helix_turn_helix gluconate operon transcriptional repressor TREPR_1317 SM00895 TREPR_1317 TREPR_1323 SM00859 Semialdehyde dehydrogenase, NAD binding domain TREPR_1328 SM00342 helix_turn_helix, arabinose operon control protein TREPR_1330 SM00098 Alkaline phosphatase homologues TREPR_1340 SM00849 Metallo-beta-lactamase superfamily TREPR_1343 SM00635 Bacterial Ig-like domain 2 TREPR_1346 SM00710 Parallel beta-helix repeats TREPR_1351 SM00354 helix_turn _helix lactose operon repressor TREPR_1353 SM00382 ATPases associated with a variety of cellular activities TREPR_1355 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_1369 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TREPR_1371 SM00460 Transglutaminase/protease-like homologues TREPR_1372 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TREPR_1373 SM00382 ATPases associated with a variety of cellular activities TREPR_1374 SM00382 ATPases associated with a variety of cellular activities TREPR_1378 SM00382 ATPases associated with a variety of cellular activities TREPR_1379 SM00382 ATPases associated with a variety of cellular activities TREPR_1396 SM00382 ATPases associated with a variety of cellular activities TREPR_1404 SM00710 Parallel beta-helix repeats TREPR_1406 SM00530 Helix-turn-helix XRE-family like proteins TREPR_1419 SM00966 SpoVT / AbrB like domain TREPR_1430 SM00530 Helix-turn-helix XRE-family like proteins TREPR_1454 SM00382 ATPases associated with a variety of cellular activities TREPR_1455 SM00900 TREPR_1455 TREPR_1457 SM00841 Elongation factor P, C-terminal TREPR_1457 SM01185 TREPR_1457 TREPR_1458 SM00769 Water Stress and Hypersensitive response TREPR_1462 SM00710 Parallel beta-helix repeats TREPR_1468 SM00382 ATPases associated with a variety of cellular activities TREPR_1476 SM01403 TREPR_1476 TREPR_1480 SM01382 TREPR_1480 TREPR_1480 SM01383 TREPR_1480 TREPR_1483 SM00322 K homology RNA-binding domain TREPR_1487 SM01374 TREPR_1487 TREPR_1488 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TREPR_1500 SM00363 S4 RNA-binding domain TREPR_1500 SM01390 TREPR_1500 TREPR_1501 SM00662 RNA polymerases D TREPR_1504 SM00954 Region found in RelA / SpoT proteins TREPR_1506 SM00937 TREPR_1506 TREPR_1509 SM00382 ATPases associated with a variety of cellular activities TREPR_1513 SM00354 helix_turn _helix lactose operon repressor TREPR_1518 SM00342 helix_turn_helix, arabinose operon control protein TREPR_1519 SM00382 ATPases associated with a variety of cellular activities TREPR_1523 SM00382 ATPases associated with a variety of cellular activities TREPR_1528 SM00382 ATPases associated with a variety of cellular activities TREPR_1530 SM00382 ATPases associated with a variety of cellular activities TREPR_1531 SM00382 ATPases associated with a variety of cellular activities TREPR_1535 SM00257 Lysin motif TREPR_1539 SM00028 Tetratricopeptide repeats TREPR_1545 SM01323 TREPR_1545 TREPR_1555 SM01018 B12 binding domain TREPR_1574 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_1574 SM00331 Sigma factor PP2C-like phosphatases TREPR_1584 SM00470 ParB-like nuclease domain TREPR_1586 SM00091 PAS domain TREPR_1586 SM00387 Histidine kinase-like ATPases TREPR_1586 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1586 SM00448 cheY-homologous receiver domain TREPR_1587 SM00849 Metallo-beta-lactamase superfamily TREPR_1588 SM00838 Elongation factor G C-terminus TREPR_1588 SM00889 Elongation factor G, domain IV TREPR_1589 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_1600 SM01068 Putative carbohydrate binding domain TREPR_1614 SM00345 helix_turn_helix gluconate operon transcriptional repressor TREPR_1614 SM00895 TREPR_1614 TREPR_1615 SM00116 Domain in cystathionine beta-synthase and other proteins. TREPR_1620 SM00341 Helicase and RNase D C-terminal TREPR_1620 SM00487 DEAD-like helicases superfamily TREPR_1620 SM00490 helicase superfamily c-terminal domain TREPR_1620 SM00956 TREPR_1620 TREPR_1623 SM00460 Transglutaminase/protease-like homologues TREPR_1627 SM00840 TREPR_1627 TREPR_1630 SM00331 Sigma factor PP2C-like phosphatases TREPR_1632 SM00331 Sigma factor PP2C-like phosphatases TREPR_1633 SM00387 Histidine kinase-like ATPases TREPR_1633 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1633 SM00448 cheY-homologous receiver domain TREPR_1652 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TREPR_1652 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_1654 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TREPR_1654 SM00448 cheY-homologous receiver domain TREPR_1655 SM00073 Histidine Phosphotransfer domain TREPR_1655 SM00260 Two component signalling adaptor domain TREPR_1655 SM00387 Histidine kinase-like ATPases TREPR_1655 SM00448 cheY-homologous receiver domain TREPR_1656 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_1657 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_1657 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_1658 SM00138 Methyltransferase, chemotaxis proteins TREPR_1659 SM00448 cheY-homologous receiver domain TREPR_1661 SM00260 Two component signalling adaptor domain TREPR_1664 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_1664 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_1666 SM00382 ATPases associated with a variety of cellular activities TREPR_1668 SM00852 Probable molybdopterin binding domain TREPR_1670 SM00382 ATPases associated with a variety of cellular activities TREPR_1685 SM01005 Alanine racemase, C-terminal domain TREPR_1687 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_1689 SM00116 Domain in cystathionine beta-synthase and other proteins. TREPR_1689 SM01091 Transporter associated domain TREPR_1690 SM00028 Tetratricopeptide repeats TREPR_1696 SM00382 ATPases associated with a variety of cellular activities TREPR_1700 SM00100 Cyclic nucleotide-monophosphate binding domain TREPR_1700 SM00419 helix_turn_helix, cAMP Regulatory protein TREPR_1704 SM00448 cheY-homologous receiver domain TREPR_1705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_1705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_1709 SM00421 helix_turn_helix, Lux Regulon TREPR_1710 SM00387 Histidine kinase-like ATPases TREPR_1710 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1710 SM00448 cheY-homologous receiver domain TREPR_1716 SM00567 E-Z type HEAT repeats TREPR_1717 SM00028 Tetratricopeptide repeats TREPR_1718 SM00028 Tetratricopeptide repeats TREPR_1722 SM01400 TREPR_1722 TREPR_1725 SM00028 Tetratricopeptide repeats TREPR_1730 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_1743 SM00363 S4 RNA-binding domain TREPR_1755 SM00316 Ribosomal protein S1-like RNA-binding domain TREPR_1760 SM01387 TREPR_1760 TREPR_1761 SM00316 Ribosomal protein S1-like RNA-binding domain TREPR_1761 SM00322 K homology RNA-binding domain TREPR_1766 SM00937 TREPR_1766 TREPR_1768 SM00382 ATPases associated with a variety of cellular activities TREPR_1768 SM00962 SRP54-type protein, GTPase domain TREPR_1771 SM00382 ATPases associated with a variety of cellular activities TREPR_1775 SM00851 MGS-like domain TREPR_1775 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TREPR_1786 SM00382 ATPases associated with a variety of cellular activities TREPR_1787 SM00382 ATPases associated with a variety of cellular activities TREPR_1790 SM00530 Helix-turn-helix XRE-family like proteins TREPR_1799 SM00530 Helix-turn-helix XRE-family like proteins TREPR_1803 SM00642 Alpha-amylase domain TREPR_1809 SM00382 ATPases associated with a variety of cellular activities TREPR_1826 SM00382 ATPases associated with a variety of cellular activities TREPR_1829 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TREPR_1832 SM00487 DEAD-like helicases superfamily TREPR_1832 SM00490 helicase superfamily c-terminal domain TREPR_1834 SM00382 ATPases associated with a variety of cellular activities TREPR_1834 SM01086 C-terminal, D2-small domain, of ClpB protein TREPR_1840 SM00900 TREPR_1840 TREPR_1843 SM00028 Tetratricopeptide repeats TREPR_1844 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_1851 SM00327 von Willebrand factor (vWF) type A domain TREPR_1852 SM00220 Serine/Threonine protein kinases, catalytic domain TREPR_1853 SM00421 helix_turn_helix, Lux Regulon TREPR_1856 SM00028 Tetratricopeptide repeats TREPR_1860 SM00421 helix_turn_helix, Lux Regulon TREPR_1860 SM00448 cheY-homologous receiver domain TREPR_1878 SM00382 ATPases associated with a variety of cellular activities TREPR_1879 SM00387 Histidine kinase-like ATPases TREPR_1879 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1879 SM00448 cheY-homologous receiver domain TREPR_1895 SM00369 Leucine-rich repeats, typical (most populated) subfamily TREPR_1911 SM00487 DEAD-like helicases superfamily TREPR_1911 SM00490 helicase superfamily c-terminal domain TREPR_1911 SM00982 TREPR_1911 TREPR_1911 SM01058 CarD-like/TRCF domain TREPR_1913 SM00563 Phosphate acyltransferases TREPR_1923 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_1935 SM00861 Transketolase, pyrimidine binding domain TREPR_1942 SM00529 Helix-turn-helix diphteria tox regulatory element TREPR_1946 SM00411 bacterial (prokaryotic) histone like domain TREPR_1948 SM00448 cheY-homologous receiver domain TREPR_1958 SM00382 ATPases associated with a variety of cellular activities TREPR_1959 SM00382 ATPases associated with a variety of cellular activities TREPR_1964 SM00422 helix_turn_helix, mercury resistance TREPR_1965 SM00116 Domain in cystathionine beta-synthase and other proteins. TREPR_1965 SM01131 TREPR_1965 TREPR_1972 SM00354 helix_turn _helix lactose operon repressor TREPR_1975 SM00382 ATPases associated with a variety of cellular activities TREPR_1980 SM00382 ATPases associated with a variety of cellular activities TREPR_1985 SM00387 Histidine kinase-like ATPases TREPR_1985 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1985 SM00448 cheY-homologous receiver domain TREPR_1986 SM00387 Histidine kinase-like ATPases TREPR_1986 SM00388 His Kinase A (phosphoacceptor) domain TREPR_1986 SM00448 cheY-homologous receiver domain TREPR_1990 SM00890 Domain of unknown function TREPR_1997 SM00100 Cyclic nucleotide-monophosphate binding domain TREPR_2015 SM00421 helix_turn_helix, Lux Regulon TREPR_2024 SM00487 DEAD-like helicases superfamily TREPR_2024 SM00490 helicase superfamily c-terminal domain TREPR_2029 SM00481 DNA polymerase alpha chain like domain TREPR_2052 SM00885 D5 N terminal like TREPR_2067 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TREPR_2067 SM00448 cheY-homologous receiver domain TREPR_2068 SM00387 Histidine kinase-like ATPases TREPR_2068 SM00388 His Kinase A (phosphoacceptor) domain TREPR_2068 SM00448 cheY-homologous receiver domain TREPR_2069 SM00387 Histidine kinase-like ATPases TREPR_2069 SM00388 His Kinase A (phosphoacceptor) domain TREPR_2069 SM00448 cheY-homologous receiver domain TREPR_2073 SM01091 Transporter associated domain TREPR_2083 SM00421 helix_turn_helix, Lux Regulon TREPR_2094 SM00885 D5 N terminal like TREPR_2108 SM01321 TREPR_2108 TREPR_2127 SM00382 ATPases associated with a variety of cellular activities TREPR_2128 SM00382 ATPases associated with a variety of cellular activities TREPR_2138 SM00382 ATPases associated with a variety of cellular activities TREPR_2141 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_2143 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_2151 SM00487 DEAD-like helicases superfamily TREPR_2151 SM00490 helicase superfamily c-terminal domain TREPR_2152 SM01091 Transporter associated domain TREPR_2198 SM00885 D5 N terminal like TREPR_2211 SM00257 Lysin motif TREPR_2214 SM00936 Penicillin-binding protein 5, C-terminal domain TREPR_2224 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_2224 SM00331 Sigma factor PP2C-like phosphatases TREPR_2228 SM00387 Histidine kinase-like ATPases TREPR_2228 SM00388 His Kinase A (phosphoacceptor) domain TREPR_2229 SM00382 ATPases associated with a variety of cellular activities TREPR_2229 SM00448 cheY-homologous receiver domain TREPR_2232 SM00271 DnaJ molecular chaperone homology domain TREPR_2235 SM01152 TREPR_2235 TREPR_2238 SM00849 Metallo-beta-lactamase superfamily TREPR_2244 SM00463 Small MutS-related domain TREPR_2244 SM00534 ATPase domain of DNA mismatch repair MUTS family TREPR_2253 SM00487 DEAD-like helicases superfamily TREPR_2253 SM00490 helicase superfamily c-terminal domain TREPR_2253 SM00847 Helicase associated domain (HA2) Add an annotation TREPR_2263 SM00885 D5 N terminal like TREPR_2280 SM00487 DEAD-like helicases superfamily TREPR_2300 SM00421 helix_turn_helix, Lux Regulon TREPR_2300 SM00448 cheY-homologous receiver domain TREPR_2301 SM00387 Histidine kinase-like ATPases TREPR_2301 SM00388 His Kinase A (phosphoacceptor) domain TREPR_2301 SM00448 cheY-homologous receiver domain TREPR_2302 SM00421 helix_turn_helix, Lux Regulon TREPR_2306 SM00382 ATPases associated with a variety of cellular activities TREPR_2309 SM00267 diguanylate cyclase TREPR_2312 SM00342 helix_turn_helix, arabinose operon control protein TREPR_2313 SM00478 endonuclease III TREPR_2320 SM00400 zinc finger TREPR_2320 SM00493 TREPR_2320 TREPR_2324 SM00028 Tetratricopeptide repeats TREPR_2330 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_2334 SM00382 ATPases associated with a variety of cellular activities TREPR_2334 SM00930 TREPR_2334 TREPR_2337 SM00028 Tetratricopeptide repeats TREPR_2338 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TREPR_2338 SM00382 ATPases associated with a variety of cellular activities TREPR_2339 SM00316 Ribosomal protein S1-like RNA-binding domain TREPR_2340 SM00363 S4 RNA-binding domain TREPR_2344 SM00382 ATPases associated with a variety of cellular activities TREPR_2352 SM00957 SecA DEAD-like domain TREPR_2352 SM00958 SecA preprotein cross-linking domain TREPR_2355 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TREPR_2358 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TREPR_2367 SM00984 UDP binding domain TREPR_2371 SM00382 ATPases associated with a variety of cellular activities TREPR_2411 SM00478 endonuclease III TREPR_2423 SM00382 ATPases associated with a variety of cellular activities TREPR_2425 SM01204 TREPR_2425 TREPR_2428 SM00382 ATPases associated with a variety of cellular activities TREPR_2429 SM00382 ATPases associated with a variety of cellular activities TREPR_2435 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TREPR_2435 SM01080 TREPR_2435 TREPR_2436 SM00710 Parallel beta-helix repeats TREPR_2442 SM00434 DNA Topoisomerase IV TREPR_2445 SM00433 TopoisomeraseII TREPR_2447 SM00838 Elongation factor G C-terminus TREPR_2447 SM00889 Elongation factor G, domain IV TREPR_2451 SM00387 Histidine kinase-like ATPases TREPR_2451 SM00388 His Kinase A (phosphoacceptor) domain TREPR_2451 SM00448 cheY-homologous receiver domain TREPR_2454 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TREPR_2456 SM00448 cheY-homologous receiver domain TREPR_2457 SM00028 Tetratricopeptide repeats TREPR_2457 SM00954 Region found in RelA / SpoT proteins TREPR_2460 SM00646 TREPR_2460 TREPR_2468 SM00853 MutL C terminal dimerisation domain TREPR_2468 SM01340 TREPR_2468 TREPR_2470 SM00257 Lysin motif TREPR_2472 SM00530 Helix-turn-helix XRE-family like proteins TREPR_2482 SM00387 Histidine kinase-like ATPases TREPR_2483 SM00421 helix_turn_helix, Lux Regulon TREPR_2483 SM00448 cheY-homologous receiver domain TREPR_2485 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_2504 SM00382 ATPases associated with a variety of cellular activities TREPR_2505 SM00849 Metallo-beta-lactamase superfamily TREPR_2510 SM01119 TREPR_2510 TREPR_2515 SM00244 prohibitin homologues TREPR_2516 SM00244 prohibitin homologues TREPR_2517 SM00028 Tetratricopeptide repeats TREPR_2524 SM01359 TREPR_2524 TREPR_2524 SM01360 TREPR_2524 TREPR_2526 SM00834 Putative regulatory protein TREPR_2538 SM00382 ATPases associated with a variety of cellular activities TREPR_2541 SM00764 Citrate lyase ligase C-terminal domain TREPR_2542 SM00764 Citrate lyase ligase C-terminal domain TREPR_2543 SM00764 Citrate lyase ligase C-terminal domain TREPR_2544 SM00764 Citrate lyase ligase C-terminal domain TREPR_2546 SM00382 ATPases associated with a variety of cellular activities TREPR_2551 SM00382 ATPases associated with a variety of cellular activities TREPR_2555 SM00382 ATPases associated with a variety of cellular activities TREPR_2562 SM00382 ATPases associated with a variety of cellular activities TREPR_2562 SM01086 C-terminal, D2-small domain, of ClpB protein TREPR_2565 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TREPR_2565 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TREPR_2565 SM00493 TREPR_2565 TREPR_2569 SM00864 Tubulin/FtsZ family, GTPase domain TREPR_2569 SM00865 Tubulin/FtsZ family, C-terminal domain TREPR_2570 SM00842 Cell division protein FtsA TREPR_2580 SM00357 Cold shock protein domain TREPR_2580 SM00382 ATPases associated with a variety of cellular activities TREPR_2580 SM00959 Rho termination factor, N-terminal domain TREPR_2600 SM00382 ATPases associated with a variety of cellular activities TREPR_2600 SM00994 ClpX C4-type zinc finger TREPR_2600 SM01086 C-terminal, D2-small domain, of ClpB protein TREPR_2601 SM00382 ATPases associated with a variety of cellular activities TREPR_2601 SM00464 Found in ATP-dependent protease La (LON) TREPR_2604 SM00986 Uracil DNA glycosylase superfamily TREPR_2604 SM00987 UreE urease accessory protein, C-terminal domain TREPR_2605 SM00487 DEAD-like helicases superfamily TREPR_2605 SM00490 helicase superfamily c-terminal domain TREPR_2608 SM00491 TREPR_2608 TREPR_2610 SM00564 beta-propeller repeat TREPR_2613 SM00530 Helix-turn-helix XRE-family like proteins TREPR_2616 SM00530 Helix-turn-helix XRE-family like proteins TREPR_2623 SM00028 Tetratricopeptide repeats TREPR_2624 SM00028 Tetratricopeptide repeats TREPR_2629 SM01252 TREPR_2629 TREPR_2630 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TREPR_2630 SM00534 ATPase domain of DNA mismatch repair MUTS family TREPR_2631 SM00935 Outer membrane protein (OmpH-like) TREPR_2639 SM00487 DEAD-like helicases superfamily TREPR_2639 SM00490 helicase superfamily c-terminal domain TREPR_2639 SM00847 Helicase associated domain (HA2) Add an annotation TREPR_2640 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TREPR_2640 SM00292 breast cancer carboxy-terminal domain TREPR_2640 SM00532 Ligase N family TREPR_2646 SM00028 Tetratricopeptide repeats TREPR_2661 SM01329 TREPR_2661 TREPR_2666 SM00382 ATPases associated with a variety of cellular activities TREPR_2667 SM00382 ATPases associated with a variety of cellular activities TREPR_2677 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TREPR_2679 SM00320 WD40 repeats TREPR_2680 SM00382 ATPases associated with a variety of cellular activities TREPR_2687 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_2689 SM00358 Double-stranded RNA binding motif TREPR_2689 SM00535 Ribonuclease III family TREPR_2704 SM00448 cheY-homologous receiver domain TREPR_2704 SM00862 Transcriptional regulatory protein, C terminal TREPR_2705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_2705 SM00387 Histidine kinase-like ATPases TREPR_2705 SM00388 His Kinase A (phosphoacceptor) domain TREPR_2707 SM00347 helix_turn_helix multiple antibiotic resistance protein TREPR_2726 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. TREPR_2728 SM00881 CoA binding domain TREPR_2733 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_2739 SM00487 DEAD-like helicases superfamily TREPR_2745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_2749 SM00562 TREPR_2749 TREPR_2751 SM00849 Metallo-beta-lactamase superfamily TREPR_2753 SM00530 Helix-turn-helix XRE-family like proteins TREPR_2754 SM00470 ParB-like nuclease domain TREPR_2759 SM00883 Chaperonin 10 Kd subunit TREPR_2762 SM00028 Tetratricopeptide repeats TREPR_2766 SM00448 cheY-homologous receiver domain TREPR_2780 SM00028 Tetratricopeptide repeats TREPR_2784 SM00710 Parallel beta-helix repeats TREPR_2785 SM00060 Fibronectin type 3 domain TREPR_2786 SM00710 Parallel beta-helix repeats TREPR_2787 SM00060 Fibronectin type 3 domain TREPR_2793 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TREPR_2795 SM00981 TREPR_2795 TREPR_2799 SM00028 Tetratricopeptide repeats TREPR_2813 SM00382 ATPases associated with a variety of cellular activities TREPR_2813 SM01086 C-terminal, D2-small domain, of ClpB protein TREPR_2820 SM00248 ankyrin repeats TREPR_2844 SM01245 TREPR_2844 TREPR_2848 SM00382 ATPases associated with a variety of cellular activities TREPR_2848 SM00962 SRP54-type protein, GTPase domain TREPR_2871 SM00530 Helix-turn-helix XRE-family like proteins TREPR_2878 SM00852 Probable molybdopterin binding domain TREPR_2888 SM00938 Nitrogen regulatory protein P-II TREPR_2889 SM00938 Nitrogen regulatory protein P-II TREPR_2893 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TREPR_2893 SM00382 ATPases associated with a variety of cellular activities TREPR_2900 SM01018 B12 binding domain TREPR_2903 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_2903 SM00387 Histidine kinase-like ATPases TREPR_2903 SM00388 His Kinase A (phosphoacceptor) domain TREPR_2903 SM00448 cheY-homologous receiver domain TREPR_2905 SM01018 B12 binding domain TREPR_2911 SM00636 TREPR_2911 TREPR_2916 SM00387 Histidine kinase-like ATPases TREPR_2916 SM00388 His Kinase A (phosphoacceptor) domain TREPR_2916 SM00448 cheY-homologous receiver domain TREPR_2919 SM00382 ATPases associated with a variety of cellular activities TREPR_2919 SM00843 TREPR_2919 TREPR_2921 SM00257 Lysin motif TREPR_2926 SM00028 Tetratricopeptide repeats TREPR_2927 SM00248 ankyrin repeats TREPR_2928 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_2930 SM00382 ATPases associated with a variety of cellular activities TREPR_2931 SM00382 ATPases associated with a variety of cellular activities TREPR_2936 SM00260 Two component signalling adaptor domain TREPR_2940 SM00849 Metallo-beta-lactamase superfamily TREPR_2941 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_2941 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_2945 SM00487 DEAD-like helicases superfamily TREPR_2945 SM00490 helicase superfamily c-terminal domain TREPR_2947 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TREPR_2955 SM00855 Phosphoglycerate mutase family TREPR_2957 SM01061 CAT RNA binding domain TREPR_2959 SM00100 Cyclic nucleotide-monophosphate binding domain TREPR_2971 SM00138 Methyltransferase, chemotaxis proteins TREPR_2971 SM00260 Two component signalling adaptor domain TREPR_2972 SM00073 Histidine Phosphotransfer domain TREPR_2972 SM00260 Two component signalling adaptor domain TREPR_2972 SM00387 Histidine kinase-like ATPases TREPR_2972 SM01231 TREPR_2972 TREPR_2973 SM00955 TREPR_2973 TREPR_2976 SM01130 TREPR_2976 TREPR_2977 SM00859 Semialdehyde dehydrogenase, NAD binding domain TREPR_2978 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_2978 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_2984 SM00487 DEAD-like helicases superfamily TREPR_2984 SM00490 helicase superfamily c-terminal domain TREPR_2985 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TREPR_2990 SM00346 helix_turn_helix isocitrate lyase regulation TREPR_2995 SM00320 WD40 repeats TREPR_2997 SM00838 Elongation factor G C-terminus TREPR_2997 SM00889 Elongation factor G, domain IV TREPR_3000 SM00382 ATPases associated with a variety of cellular activities TREPR_3004 SM00342 helix_turn_helix, arabinose operon control protein TREPR_3004 SM00448 cheY-homologous receiver domain TREPR_3005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_3012 SM00448 cheY-homologous receiver domain TREPR_3013 SM00138 Methyltransferase, chemotaxis proteins TREPR_3017 SM00382 ATPases associated with a variety of cellular activities TREPR_3030 SM00382 ATPases associated with a variety of cellular activities TREPR_3031 SM00382 ATPases associated with a variety of cellular activities TREPR_3032 SM00322 K homology RNA-binding domain TREPR_3032 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_3036 SM00382 ATPases associated with a variety of cellular activities TREPR_3040 SM00909 Sporulation and spore germination TREPR_3043 SM00382 ATPases associated with a variety of cellular activities TREPR_3056 SM00448 cheY-homologous receiver domain TREPR_3057 SM00387 Histidine kinase-like ATPases TREPR_3057 SM00388 His Kinase A (phosphoacceptor) domain TREPR_3057 SM00448 cheY-homologous receiver domain TREPR_3058 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_3059 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TREPR_3059 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TREPR_3059 SM01049 TREPR_3059 TREPR_3060 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TREPR_3060 SM00474 3'-5' exonuclease TREPR_3060 SM00475 5'-3' exonuclease TREPR_3060 SM00482 DNA polymerase A domain TREPR_3088 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_3089 SM00382 ATPases associated with a variety of cellular activities TREPR_3094 SM00902 Iron hydrogenase small subunit TREPR_3099 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TREPR_3102 SM00852 Probable molybdopterin binding domain TREPR_3111 SM00974 TREPR_3111 TREPR_3115 SM00487 DEAD-like helicases superfamily TREPR_3115 SM00490 helicase superfamily c-terminal domain TREPR_3119 SM01252 TREPR_3119 TREPR_3130 SM00382 ATPases associated with a variety of cellular activities TREPR_3151 SM00387 Histidine kinase-like ATPases TREPR_3151 SM00388 His Kinase A (phosphoacceptor) domain TREPR_3151 SM00448 cheY-homologous receiver domain TREPR_3163 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TREPR_3163 SM00267 diguanylate cyclase TREPR_3164 SM00421 helix_turn_helix, Lux Regulon TREPR_3164 SM00448 cheY-homologous receiver domain TREPR_3171 SM00710 Parallel beta-helix repeats TREPR_3174 SM00710 Parallel beta-helix repeats TREPR_3184 SM00382 ATPases associated with a variety of cellular activities TREPR_3187 SM00422 helix_turn_helix, mercury resistance TREPR_3191 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_3194 SM00387 Histidine kinase-like ATPases TREPR_3194 SM00388 His Kinase A (phosphoacceptor) domain TREPR_3194 SM00448 cheY-homologous receiver domain TREPR_3196 SM00387 Histidine kinase-like ATPases TREPR_3200 SM00382 ATPases associated with a variety of cellular activities TREPR_3217 SM01001 AIR carboxylase TREPR_3221 SM00382 ATPases associated with a variety of cellular activities TREPR_3255 SM00316 Ribosomal protein S1-like RNA-binding domain TREPR_3256 SM00463 Small MutS-related domain TREPR_3261 SM00327 von Willebrand factor (vWF) type A domain TREPR_3266 SM00382 ATPases associated with a variety of cellular activities TREPR_3267 SM00382 ATPases associated with a variety of cellular activities TREPR_3271 SM00382 ATPases associated with a variety of cellular activities TREPR_3275 SM00382 ATPases associated with a variety of cellular activities TREPR_3282 SM00331 Sigma factor PP2C-like phosphatases TREPR_3287 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TREPR_3288 SM00902 Iron hydrogenase small subunit TREPR_3288 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TREPR_3294 SM00382 ATPases associated with a variety of cellular activities TREPR_3300 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TREPR_3301 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TREPR_3305 SM00954 Region found in RelA / SpoT proteins TREPR_3308 SM00271 DnaJ molecular chaperone homology domain TREPR_3319 SM00854 Bacterial capsule synthesis protein PGA_cap TREPR_3321 SM00530 Helix-turn-helix XRE-family like proteins TREPR_3332 SM00859 Semialdehyde dehydrogenase, NAD binding domain TREPR_3336 SM01260 TREPR_3336 TREPR_3337 SM00382 ATPases associated with a variety of cellular activities TREPR_3339 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_3342 SM01260 TREPR_3342 TREPR_3343 SM00382 ATPases associated with a variety of cellular activities TREPR_3345 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_3347 SM00421 helix_turn_helix, Lux Regulon TREPR_3347 SM00448 cheY-homologous receiver domain TREPR_3351 SM00966 SpoVT / AbrB like domain TREPR_3354 SM00530 Helix-turn-helix XRE-family like proteins TREPR_3360 SM00849 Metallo-beta-lactamase superfamily TREPR_3361 SM00448 cheY-homologous receiver domain TREPR_3402 SM01018 B12 binding domain TREPR_3403 SM00342 helix_turn_helix, arabinose operon control protein TREPR_3404 SM00342 helix_turn_helix, arabinose operon control protein TREPR_3405 SM00421 helix_turn_helix, Lux Regulon TREPR_3406 SM00421 helix_turn_helix, Lux Regulon TREPR_3411 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TREPR_3412 SM00710 Parallel beta-helix repeats TREPR_3416 SM01133 TREPR_3416 TREPR_3418 SM00530 Helix-turn-helix XRE-family like proteins TREPR_3430 SM00267 diguanylate cyclase TREPR_3430 SM00448 cheY-homologous receiver domain TREPR_3443 SM00836 DALR anticodon binding domain TREPR_3443 SM01016 Arginyl tRNA synthetase N terminal dom TREPR_3445 SM00563 Phosphate acyltransferases TREPR_3462 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain TREPR_3473 SM00635 Bacterial Ig-like domain 2 TREPR_3475 SM00530 Helix-turn-helix XRE-family like proteins TREPR_3485 SM00650 Ribosomal RNA adenine dimethylases TREPR_3490 SM00382 ATPases associated with a variety of cellular activities TREPR_3494 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TREPR_3504 SM00387 Histidine kinase-like ATPases TREPR_3504 SM00388 His Kinase A (phosphoacceptor) domain TREPR_3504 SM00448 cheY-homologous receiver domain TREPR_3505 SM00448 cheY-homologous receiver domain TREPR_3505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TREPR_3506 SM00382 ATPases associated with a variety of cellular activities TREPR_3511 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TREPR_3511 SM00382 ATPases associated with a variety of cellular activities TREPR_3513 SM00938 Nitrogen regulatory protein P-II TREPR_3518 SM00421 helix_turn_helix, Lux Regulon TREPR_3518 SM00448 cheY-homologous receiver domain TREPR_3523 SM00387 Histidine kinase-like ATPases TREPR_3525 SM01230 TREPR_3525 TREPR_3532 SM00382 ATPases associated with a variety of cellular activities TREPR_3543 SM00382 ATPases associated with a variety of cellular activities TREPR_3562 SM00849 Metallo-beta-lactamase superfamily TREPR_3565 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TREPR_3565 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TREPR_3566 SM00344 helix_turn_helix ASNC type TREPR_3579 SM00382 ATPases associated with a variety of cellular activities TREPR_3585 SM00966 SpoVT / AbrB like domain TREPR_3587 SM00710 Parallel beta-helix repeats TREPR_3589 SM00421 helix_turn_helix, Lux Regulon TREPR_3589 SM00448 cheY-homologous receiver domain TREPR_3591 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TREPR_3591 SM01080 TREPR_3591 TREPR_3594 SM00902 Iron hydrogenase small subunit TREPR_3594 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TREPR_3595 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TREPR_3597 SM00028 Tetratricopeptide repeats TREPR_3600 SM00971 Serine acetyltransferase, N-terminal TREPR_3617 SM00382 ATPases associated with a variety of cellular activities TREPR_3623 SM00479 TREPR_3623 TREPR_3629 SM00487 DEAD-like helicases superfamily TREPR_3638 SM00845 GatB domain TREPR_3643 SM00530 Helix-turn-helix XRE-family like proteins TREPR_3648 SM00028 Tetratricopeptide repeats TREPR_3654 SM01400 TREPR_3654 TREPR_3663 SM00382 ATPases associated with a variety of cellular activities TREPR_3664 SM00382 ATPases associated with a variety of cellular activities TREPR_3668 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_3668 SM00876 Biotin and Thiamin Synthesis associated domain TREPR_3669 SM00876 Biotin and Thiamin Synthesis associated domain TREPR_3672 SM00116 Domain in cystathionine beta-synthase and other proteins. TREPR_3672 SM00924 MgtE intracellular N domain TREPR_3691 SM00530 Helix-turn-helix XRE-family like proteins TREPR_3704 SM00642 Alpha-amylase domain TREPR_3714 SM00232 JAB/MPN domain TREPR_3716 SM00450 Rhodanese Homology Domain TREPR_3720 SM00382 ATPases associated with a variety of cellular activities TREPR_3722 SM00062 Bacterial periplasmic substrate-binding proteins TREPR_3742 SM00382 ATPases associated with a variety of cellular activities TREPR_3761 SM00382 ATPases associated with a variety of cellular activities TREPR_3763 SM00530 Helix-turn-helix XRE-family like proteins TREPR_3768 SM00028 Tetratricopeptide repeats TREPR_3771 SM00382 ATPases associated with a variety of cellular activities TREPR_3771 SM00464 Found in ATP-dependent protease La (LON) TREPR_3774 SM01209 TREPR_3774 TREPR_3774 SM01210 TREPR_3774 TREPR_3777 SM00729 Elongator protein 3, MiaB family, Radical SAM TREPR_3777 SM00876 Biotin and Thiamin Synthesis associated domain TREPR_3778 SM00798 AICARFT/IMPCHase bienzyme TREPR_3778 SM00851 MGS-like domain TREPR_3783 SM01133 TREPR_3783 TREPR_3788 SM01001 AIR carboxylase TREPR_3791 SM00849 Metallo-beta-lactamase superfamily TREPR_3795 SM00316 Ribosomal protein S1-like RNA-binding domain TREPR_3795 SM00732 Likely ribonuclease with RNase H fold. TREPR_3805 SM00382 ATPases associated with a variety of cellular activities TREPR_3813 SM00481 DNA polymerase alpha chain like domain TREPR_3814 SM00028 Tetratricopeptide repeats TREPR_3815 SM00100 Cyclic nucleotide-monophosphate binding domain TREPR_3819 SM00487 DEAD-like helicases superfamily TREPR_3819 SM00490 helicase superfamily c-terminal domain TREPR_3821 SM00481 DNA polymerase alpha chain like domain TREPR_3853 SM00530 Helix-turn-helix XRE-family like proteins TREPR_3859 SM00028 Tetratricopeptide repeats TREPR_3861 SM00028 Tetratricopeptide repeats TREPR_3863 SM00028 Tetratricopeptide repeats TREPR_3868 SM00479 TREPR_3868 TREPR_3870 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain TREPR_3876 SM00155 Phospholipase D. Active site motifs. TREPR_3877 SM00486 DNA polymerase type-B family TREPR_3881 SM00729 Elongator protein 3, MiaB family, Radical SAM