TREPR_2973 e9cf4920c94d72865c5cccc461e61d2a 641 SUPERFAMILY SSF50249 582 636 8.57E-5 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2973 e9cf4920c94d72865c5cccc461e61d2a 641 SMART SM00955 238 536 7.9E-54 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TREPR_2973 e9cf4920c94d72865c5cccc461e61d2a 641 Gene3D G3DSA:1.10.10.10 162 230 2.8E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2973 e9cf4920c94d72865c5cccc461e61d2a 641 SUPERFAMILY SSF50249 186 577 6.85E-74 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2973 e9cf4920c94d72865c5cccc461e61d2a 641 Pfam PF00773 RNB domain 238 469 6.4E-28 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TREPR_2973 e9cf4920c94d72865c5cccc461e61d2a 641 Pfam PF00773 RNB domain 484 535 1.6E-14 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TREPR_3420 ce4e7b4a21176d23752343a81ef33af8 259 Gene3D G3DSA:3.40.50.970 65 246 4.5E-20 T 13-10-2018 TREPR_3420 ce4e7b4a21176d23752343a81ef33af8 259 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 63 211 2.1E-21 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TREPR_3420 ce4e7b4a21176d23752343a81ef33af8 259 SUPERFAMILY SSF52518 14 245 5.33E-51 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0588 46c5c2c9086ebed6d127c9a182110426 326 Pfam PF01081 KDPG and KHG aldolase 5 199 1.3E-70 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TREPR_0588 46c5c2c9086ebed6d127c9a182110426 326 Gene3D G3DSA:3.20.20.70 1 208 3.6E-80 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0588 46c5c2c9086ebed6d127c9a182110426 326 SUPERFAMILY SSF51569 3 206 9.16E-69 T 13-10-2018 TREPR_0588 46c5c2c9086ebed6d127c9a182110426 326 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 13-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TREPR_0588 46c5c2c9086ebed6d127c9a182110426 326 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 13-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TREPR_0588 46c5c2c9086ebed6d127c9a182110426 326 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 206 3.8E-80 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TREPR_0721 65ec80ad2a407cecb1c13c96a658d56b 398 SUPERFAMILY SSF51338 1 361 1.11E-15 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_0721 65ec80ad2a407cecb1c13c96a658d56b 398 Gene3D G3DSA:3.20.20.140 157 338 9.8E-23 T 13-10-2018 TREPR_0721 65ec80ad2a407cecb1c13c96a658d56b 398 Pfam PF01979 Amidohydrolase family 255 360 7.8E-8 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TREPR_0721 65ec80ad2a407cecb1c13c96a658d56b 398 SUPERFAMILY SSF51556 86 314 1.41E-24 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_0721 65ec80ad2a407cecb1c13c96a658d56b 398 Gene3D G3DSA:2.30.40.10 1 79 2.1E-14 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 521 667 1.6E-27 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 Gene3D G3DSA:3.30.450.20 77 219 2.8E-42 T 13-10-2018 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 Gene3D G3DSA:3.30.450.20 67 323 2.8E-42 T 13-10-2018 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 Pfam PF02743 Cache domain 54 266 1.2E-15 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 Gene3D G3DSA:1.20.1480.50 324 416 5.4E-12 T 13-10-2018 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 SUPERFAMILY SSF58104 378 478 3.14E-8 T 13-10-2018 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 SMART SM00283 453 700 3.7E-49 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 Gene3D G3DSA:1.10.287.950 453 742 1.5E-47 T 13-10-2018 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 SUPERFAMILY SSF58104 466 692 2.62E-44 T 13-10-2018 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 Pfam PF00672 HAMP domain 357 406 6.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_2941 4874d9e07d35e6edd835ee667c5f5715 744 SMART SM00304 356 410 1.0E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_2072 cf2085209d041c056063679c2c928a85 134 SUPERFAMILY SSF55811 1 130 7.58E-26 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TREPR_2072 cf2085209d041c056063679c2c928a85 134 Gene3D G3DSA:3.90.79.10 1 132 7.6E-31 T 13-10-2018 TREPR_2072 cf2085209d041c056063679c2c928a85 134 Pfam PF00293 NUDIX domain 3 126 3.3E-12 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Gene3D G3DSA:3.30.230.70 236 553 1.5E-111 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 SUPERFAMILY SSF54211 295 491 2.33E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 SUPERFAMILY SSF50249 621 695 2.81E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 6.4E-16 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Pfam PF03725 3' exoribonuclease family, domain 2 458 531 6.3E-5 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 692 2.8E-296 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Gene3D G3DSA:3.30.1370.10 554 624 1.4E-17 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Pfam PF00575 S1 RNA binding domain 622 691 1.3E-19 T 13-10-2018 IPR003029 S1 domain GO:0003676 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 SUPERFAMILY SSF46915 241 320 2.62E-14 T 13-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Gene3D G3DSA:3.30.230.70 1 228 7.2E-73 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 SUPERFAMILY SSF54211 2 142 1.06E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 SUPERFAMILY SSF55666 451 562 3.01E-27 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 318 3.7E-17 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Pfam PF00013 KH domain 560 615 2.1E-10 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 SMART SM00322 555 620 3.1E-12 T 13-10-2018 IPR004087 K Homology domain GO:0003676 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Pfam PF01138 3' exoribonuclease family, domain 1 323 454 3.7E-18 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 2.4E-13 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Gene3D G3DSA:2.40.50.140 625 695 4.7E-26 T 13-10-2018 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 SMART SM00316 623 693 5.1E-24 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 SUPERFAMILY SSF55666 137 228 2.75E-25 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 696 29.647 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 SUPERFAMILY SSF54791 558 643 6.07E-20 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TREPR_1761 246d727c1ad1bed20dd2cf88b2c3e505 729 PIRSF PIRSF005499 1 726 3.0E-295 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TREPR_0108 7819682f26512fbdd5e7f78bc64d6412 372 SUPERFAMILY SSF50331 237 363 3.89E-26 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_0108 7819682f26512fbdd5e7f78bc64d6412 372 Gene3D G3DSA:2.40.50.140 286 348 1.2E-24 T 13-10-2018 TREPR_0108 7819682f26512fbdd5e7f78bc64d6412 372 Gene3D G3DSA:2.40.50.100 240 360 1.2E-24 T 13-10-2018 TREPR_0108 7819682f26512fbdd5e7f78bc64d6412 372 Pfam PF08402 TOBE domain 284 354 1.3E-6 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TREPR_0108 7819682f26512fbdd5e7f78bc64d6412 372 SUPERFAMILY SSF52540 4 244 1.21E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0108 7819682f26512fbdd5e7f78bc64d6412 372 Gene3D G3DSA:3.40.50.300 1 239 2.2E-74 T 13-10-2018 TREPR_0108 7819682f26512fbdd5e7f78bc64d6412 372 Pfam PF00005 ABC transporter 21 162 7.3E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0108 7819682f26512fbdd5e7f78bc64d6412 372 SMART SM00382 29 212 2.1E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0108 7819682f26512fbdd5e7f78bc64d6412 372 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3432 e3a4f51e536ee2484025e39e5702ecc0 177 Pfam PF00156 Phosphoribosyl transferase domain 31 145 4.0E-16 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TREPR_3432 e3a4f51e536ee2484025e39e5702ecc0 177 SUPERFAMILY SSF53271 9 175 8.26E-44 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_3432 e3a4f51e536ee2484025e39e5702ecc0 177 Gene3D G3DSA:3.40.50.2020 2 177 1.7E-55 T 13-10-2018 TREPR_3432 e3a4f51e536ee2484025e39e5702ecc0 177 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 7 174 34.533 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 TREPR_3432 e3a4f51e536ee2484025e39e5702ecc0 177 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 174 3.2E-56 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 TREPR_1118 d94fb36dc14ff857ebed2b52868c9891 339 SUPERFAMILY SSF50182 181 247 2.71E-15 T 13-10-2018 IPR010920 LSM domain superfamily TREPR_1118 d94fb36dc14ff857ebed2b52868c9891 339 Gene3D G3DSA:2.30.30.60 197 245 8.7E-11 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TREPR_1118 d94fb36dc14ff857ebed2b52868c9891 339 SUPERFAMILY SSF82861 93 180 1.96E-9 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TREPR_1118 d94fb36dc14ff857ebed2b52868c9891 339 Pfam PF00924 Mechanosensitive ion channel 140 337 7.7E-40 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TREPR_1927 6bd8aaa6f019f9889134aafe134e4b88 364 SUPERFAMILY SSF141371 271 358 7.46E-7 T 13-10-2018 TREPR_1927 6bd8aaa6f019f9889134aafe134e4b88 364 Pfam PF12945 Flagellar protein YcgR 164 224 7.6E-7 T 13-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal TREPR_1927 6bd8aaa6f019f9889134aafe134e4b88 364 Gene3D G3DSA:2.40.10.220 244 364 5.5E-7 T 13-10-2018 TREPR_1927 6bd8aaa6f019f9889134aafe134e4b88 364 Pfam PF07238 PilZ domain 266 360 6.6E-12 T 13-10-2018 IPR009875 PilZ domain GO:0035438 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 Pfam PF00672 HAMP domain 335 384 6.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 Pfam PF02743 Cache domain 35 295 7.2E-12 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 SUPERFAMILY SSF58104 356 452 5.49E-8 T 13-10-2018 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 SMART SM00283 431 678 1.3E-50 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 499 644 3.1E-28 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 SMART SM00304 334 388 3.1E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 SUPERFAMILY SSF58104 435 671 1.15E-45 T 13-10-2018 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 Gene3D G3DSA:1.10.287.950 404 720 4.4E-49 T 13-10-2018 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 Gene3D G3DSA:3.30.450.20 59 202 2.8E-41 T 13-10-2018 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 Gene3D G3DSA:1.20.1480.50 303 394 5.7E-12 T 13-10-2018 TREPR_0495 e6dc35ac16ed0fed6c522e5198ef04ab 722 Gene3D G3DSA:3.30.450.20 52 302 2.8E-41 T 13-10-2018 TREPR_2885 edd3e49daf12a21663f3ecedb758d3cc 516 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 83 90 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 TREPR_2885 edd3e49daf12a21663f3ecedb758d3cc 516 SUPERFAMILY SSF53807 50 469 2.91E-136 T 13-10-2018 TREPR_2885 edd3e49daf12a21663f3ecedb758d3cc 516 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 65 459 5.0E-113 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_2885 edd3e49daf12a21663f3ecedb758d3cc 516 Gene3D G3DSA:3.40.50.12380 200 467 1.7E-92 T 13-10-2018 TREPR_2885 edd3e49daf12a21663f3ecedb758d3cc 516 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 40 471 3.9E-192 T 13-10-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0009399|GO:0065003 TREPR_2885 edd3e49daf12a21663f3ecedb758d3cc 516 Gene3D G3DSA:3.40.50.1980 50 199 1.7E-48 T 13-10-2018 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 Pfam PF02613 Nitrate reductase delta subunit 42 150 6.0E-11 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 Gene3D G3DSA:3.40.228.10 510 584 4.2E-19 T 13-10-2018 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 SUPERFAMILY SSF50692 804 968 1.4E-35 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 Gene3D G3DSA:2.40.40.20 826 970 4.1E-39 T 13-10-2018 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 Gene3D G3DSA:3.40.50.740 238 488 3.9E-63 T 13-10-2018 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 SUPERFAMILY SSF53706 246 853 5.37E-146 T 13-10-2018 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 Pfam PF01568 Molydopterin dinucleotide binding domain 851 962 3.2E-21 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 682 699 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 Gene3D G3DSA:3.40.50.740 624 792 2.9E-30 T 13-10-2018 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 Pfam PF00384 Molybdopterin oxidoreductase 293 739 7.1E-61 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 SUPERFAMILY SSF89155 4 150 4.71E-15 T 13-10-2018 IPR036411 TorD-like superfamily TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 236 968 7.6E-242 T 13-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 TREPR_0957 dd1b5a9965383caebb05bc3711c624ff 970 Gene3D G3DSA:1.10.3480.10 1 194 2.1E-21 T 13-10-2018 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 Gene3D G3DSA:1.25.40.10 270 482 4.7E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SUPERFAMILY SSF48452 148 369 8.67E-30 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 Pfam PF14559 Tetratricopeptide repeat 74 132 1.0E-5 T 13-10-2018 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SUPERFAMILY SSF48452 73 175 1.93E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SMART SM00028 131 164 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SMART SM00028 335 368 38.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SMART SM00028 233 266 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SMART SM00028 97 130 370.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SMART SM00028 199 232 13.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SMART SM00028 165 198 0.055 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SMART SM00028 301 334 450.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SMART SM00028 267 300 23.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 SMART SM00028 434 467 250.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 Gene3D G3DSA:1.25.40.10 53 167 2.9E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 Gene3D G3DSA:1.25.40.10 168 269 1.5E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 Pfam PF13432 Tetratricopeptide repeat 313 366 0.0061 T 13-10-2018 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 Pfam PF13432 Tetratricopeptide repeat 169 230 1.9E-6 T 13-10-2018 TREPR_0377 bb542f92d8a6e7fbb65b4a58bcd534b6 486 Pfam PF13432 Tetratricopeptide repeat 239 298 6.4E-4 T 13-10-2018 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 SMART SM01192 139 430 3.7E-205 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 430 7.3E-208 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 Hamap MF_00318 Enolase [eno]. 2 416 44.486 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 Pfam PF03952 Enolase, N-terminal domain 4 134 8.8E-62 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 SUPERFAMILY SSF54826 3 138 1.18E-57 T 13-10-2018 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 PIRSF PIRSF001400 1 430 1.3E-188 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 PRINTS PR00148 Enolase signature 37 51 5.7E-48 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 PRINTS PR00148 Enolase signature 107 123 5.7E-48 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 PRINTS PR00148 Enolase signature 339 353 5.7E-48 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 PRINTS PR00148 Enolase signature 161 174 5.7E-48 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 PRINTS PR00148 Enolase signature 316 327 5.7E-48 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 PRINTS PR00148 Enolase signature 368 385 5.7E-48 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 429 2.3E-129 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 Gene3D G3DSA:3.20.20.120 128 433 3.4E-131 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 Gene3D G3DSA:3.30.390.10 1 127 8.3E-58 T 13-10-2018 IPR029017 Enolase-like, N-terminal TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 SUPERFAMILY SSF51604 141 431 5.66E-122 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 ProSitePatterns PS00164 Enolase signature. 339 352 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0776 0ee15a535d0bb9e46330f3cb196b8a24 433 SMART SM01193 4 134 8.9E-98 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_1727 272e13df881dd8a06b67dd6250c9a826 176 PIRSF PIRSF004553 1 175 6.8E-46 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 TREPR_1727 272e13df881dd8a06b67dd6250c9a826 176 Gene3D G3DSA:3.40.50.150 1 175 2.2E-38 T 13-10-2018 TREPR_1727 272e13df881dd8a06b67dd6250c9a826 176 Pfam PF03602 Conserved hypothetical protein 95 1 173 1.5E-33 T 13-10-2018 TREPR_1727 272e13df881dd8a06b67dd6250c9a826 176 SUPERFAMILY SSF53335 1 173 2.49E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_1727 272e13df881dd8a06b67dd6250c9a826 176 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 110 116 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_0729 38f5eb7ae86b97d73bafb0d99c5dc725 337 Pfam PF13407 Periplasmic binding protein domain 34 305 1.4E-58 T 13-10-2018 IPR025997 Periplasmic binding protein TREPR_0729 38f5eb7ae86b97d73bafb0d99c5dc725 337 SUPERFAMILY SSF53822 32 336 2.54E-74 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0729 38f5eb7ae86b97d73bafb0d99c5dc725 337 Gene3D G3DSA:3.40.50.2300 34 308 8.0E-105 T 13-10-2018 TREPR_0729 38f5eb7ae86b97d73bafb0d99c5dc725 337 Gene3D G3DSA:3.40.50.2300 138 286 8.0E-105 T 13-10-2018 TREPR_2216 bcf96f207698eab2fe344cf9fb34cb94 478 SUPERFAMILY SSF54001 59 435 6.28E-55 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_2216 bcf96f207698eab2fe344cf9fb34cb94 478 Gene3D G3DSA:3.90.70.50 221 440 9.2E-39 T 13-10-2018 TREPR_2216 bcf96f207698eab2fe344cf9fb34cb94 478 ProDom PD004169 PRECURSOR CYSTEINE STREPTOCOCCAL STREPTOPAIN PROTEINASE PROTEASE THIOL B STREPTOCOCCUS EXOTOXIN 236 433 8.0E-9 T 13-10-2018 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 TREPR_2216 bcf96f207698eab2fe344cf9fb34cb94 478 Pfam PF01640 Peptidase C10 family 237 428 7.9E-34 T 13-10-2018 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 TREPR_2216 bcf96f207698eab2fe344cf9fb34cb94 478 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 252 276 2.2E-8 T 13-10-2018 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 TREPR_2216 bcf96f207698eab2fe344cf9fb34cb94 478 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 414 435 2.2E-8 T 13-10-2018 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 TREPR_1947 1e653f307db6aa24c53b319099fdd45e 542 SUPERFAMILY SSF56317 235 514 6.54E-41 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TREPR_1947 1e653f307db6aa24c53b319099fdd45e 542 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 70 483 7.2E-98 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TREPR_1947 1e653f307db6aa24c53b319099fdd45e 542 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 17 521 17.55 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TREPR_1947 1e653f307db6aa24c53b319099fdd45e 542 Pfam PF00795 Carbon-nitrogen hydrolase 240 501 2.7E-26 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TREPR_1947 1e653f307db6aa24c53b319099fdd45e 542 Gene3D G3DSA:3.60.110.10 233 503 1.5E-18 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TREPR_1780 d1b03668bfa58bceb4cbccaac68f487f 546 SUPERFAMILY SSF53850 38 524 4.09E-100 T 13-10-2018 TREPR_1780 d1b03668bfa58bceb4cbccaac68f487f 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 438 5.7E-70 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_1780 d1b03668bfa58bceb4cbccaac68f487f 546 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 85 107 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site TREPR_1780 d1b03668bfa58bceb4cbccaac68f487f 546 Gene3D G3DSA:3.10.105.10 281 504 5.0E-98 T 13-10-2018 TREPR_1780 d1b03668bfa58bceb4cbccaac68f487f 546 Gene3D G3DSA:3.90.76.10 68 184 5.0E-98 T 13-10-2018 TREPR_1780 d1b03668bfa58bceb4cbccaac68f487f 546 PIRSF PIRSF002741 2 517 1.2E-72 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_1780 d1b03668bfa58bceb4cbccaac68f487f 546 Gene3D G3DSA:3.40.190.10 46 518 5.0E-98 T 13-10-2018 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 SUPERFAMILY SSF88659 183 274 9.16E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 46 269 3.5E-34 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 SUPERFAMILY SSF88946 9 119 7.06E-42 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 Pfam PF00140 Sigma-70 factor, region 1.2 13 45 1.2E-11 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 SUPERFAMILY SSF88659 124 196 3.53E-10 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 Pfam PF04545 Sigma-70, region 4 218 269 2.0E-14 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 PRINTS PR00046 Major sigma-70 factor signature 221 233 2.9E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 PRINTS PR00046 Major sigma-70 factor signature 98 106 2.9E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 PRINTS PR00046 Major sigma-70 factor signature 242 257 2.9E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 PRINTS PR00046 Major sigma-70 factor signature 257 268 2.9E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 PRINTS PR00046 Major sigma-70 factor signature 74 87 2.9E-21 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 PIRSF PIRSF000770 10 277 8.7E-36 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 74 87 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 Pfam PF04539 Sigma-70 region 3 131 197 1.2E-11 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 Gene3D G3DSA:1.10.601.10 2 119 1.3E-42 T 13-10-2018 TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 Gene3D G3DSA:1.10.10.10 123 198 3.6E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 Gene3D G3DSA:1.10.10.10 199 277 1.2E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0163 699440ec117c5af7145ce01dfe1cb984 284 Pfam PF04542 Sigma-70 region 2 50 119 6.6E-18 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_1617 523062670fc692aab5be44e78c33fa53 682 Gene3D G3DSA:3.40.50.300 279 647 7.2E-114 T 13-10-2018 TREPR_1617 523062670fc692aab5be44e78c33fa53 682 Gene3D G3DSA:3.40.50.300 10 271 4.2E-91 T 13-10-2018 TREPR_1617 523062670fc692aab5be44e78c33fa53 682 Gene3D G3DSA:1.10.486.10 382 554 7.2E-114 T 13-10-2018 TREPR_1617 523062670fc692aab5be44e78c33fa53 682 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 9.2E-73 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TREPR_1617 523062670fc692aab5be44e78c33fa53 682 Pfam PF13361 UvrD-like helicase C-terminal domain 276 629 1.4E-70 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TREPR_1617 523062670fc692aab5be44e78c33fa53 682 SUPERFAMILY SSF52540 5 656 9.4E-162 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1617 523062670fc692aab5be44e78c33fa53 682 Gene3D G3DSA:1.10.10.160 110 190 4.2E-91 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily TREPR_3001 d27aee86e34eb15120d80825e247da9f 382 Pfam PF13407 Periplasmic binding protein domain 38 319 4.6E-50 T 13-10-2018 IPR025997 Periplasmic binding protein TREPR_3001 d27aee86e34eb15120d80825e247da9f 382 Gene3D G3DSA:3.40.50.2300 139 368 4.2E-95 T 13-10-2018 TREPR_3001 d27aee86e34eb15120d80825e247da9f 382 Gene3D G3DSA:3.40.50.2300 38 352 4.2E-95 T 13-10-2018 TREPR_3001 d27aee86e34eb15120d80825e247da9f 382 SUPERFAMILY SSF53822 37 363 8.38E-49 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 SUPERFAMILY SSF47384 236 317 2.94E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 Gene3D G3DSA:3.30.565.10 315 483 1.3E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 SMART SM00387 363 481 8.6E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 Gene3D G3DSA:1.10.287.130 228 314 8.2E-26 T 13-10-2018 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 479 7.3E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 SUPERFAMILY SSF47226 609 760 1.44E-13 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 Gene3D G3DSA:3.40.50.12740 504 668 2.0E-38 T 13-10-2018 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 Gene3D G3DSA:1.20.120.160 669 766 2.5E-7 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 SMART SM00388 251 316 2.7E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 SUPERFAMILY SSF52172 505 630 2.13E-32 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 SMART SM00448 505 626 2.9E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 Pfam PF00072 Response regulator receiver domain 507 623 1.4E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 SUPERFAMILY SSF55874 305 482 2.75E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 2.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 2.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 478 2.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1986 58c90b8a95595d5aed81d396580a1693 852 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 316 3.6E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 399 413 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 346 369 8.8E-6 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 301 328 4.7E-4 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 47 77 2.2E-6 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 596 632 5.3E-8 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 165 203 8.8E-13 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 82 119 4.7E-8 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 207 245 1.1E-9 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 416 454 1.8E-9 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 461 495 1.7E-8 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 375 412 1.0E-9 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 250 288 5.0E-9 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 503 538 1.0E-7 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00400 WD domain, G-beta repeat 124 161 4.7E-11 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 190 204 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Gene3D G3DSA:2.130.10.10 302 379 1.7E-22 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Gene3D G3DSA:2.130.10.10 578 686 4.1E-18 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Gene3D G3DSA:2.130.10.10 43 129 5.0E-33 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Gene3D G3DSA:2.130.10.10 214 301 1.8E-37 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Gene3D G3DSA:2.130.10.10 380 464 8.0E-37 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Gene3D G3DSA:2.130.10.10 130 213 1.2E-40 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Gene3D G3DSA:2.130.10.10 465 577 2.6E-37 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SUPERFAMILY SSF50998 197 552 1.1E-102 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 275 289 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Pfam PF00656 Caspase domain 849 1062 1.5E-6 T 13-10-2018 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 357 371 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SUPERFAMILY SSF101898 505 660 4.18E-27 T 13-10-2018 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 525 539 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 232 246 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 64 78 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 483 497 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 106 120 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 Gene3D G3DSA:3.40.50.1460 831 1072 2.0E-18 T 13-10-2018 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 441 455 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 291 328 2.9E-6 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 80 119 2.6E-11 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 373 412 3.1E-11 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 415 454 1.2E-11 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 206 245 7.3E-12 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 248 288 1.2E-10 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 38 77 2.0E-7 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 457 496 9.4E-11 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 499 538 2.9E-10 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 541 590 160.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 122 161 1.4E-13 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 164 203 2.1E-14 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 331 370 5.9E-7 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SMART SM00320 593 632 2.4E-11 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 PRINTS PR00320 G protein beta WD-40 repeat signature 441 455 1.1E-8 T 13-10-2018 IPR020472 G-protein beta WD-40 repeat TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 PRINTS PR00320 G protein beta WD-40 repeat signature 525 539 1.1E-8 T 13-10-2018 IPR020472 G-protein beta WD-40 repeat TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 PRINTS PR00320 G protein beta WD-40 repeat signature 190 204 1.1E-8 T 13-10-2018 IPR020472 G-protein beta WD-40 repeat TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 SUPERFAMILY SSF50960 36 240 2.88E-66 T 13-10-2018 TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 148 162 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2995 b6306347de68215d6de1828e7a302b96 1076 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 619 633 - T 13-10-2018 IPR019775 WD40 repeat, conserved site TREPR_2333 9a85575b8bb78dd4a64aaa4a55642984 226 SUPERFAMILY SSF161098 19 211 5.49E-44 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2333 9a85575b8bb78dd4a64aaa4a55642984 226 Gene3D G3DSA:1.10.3720.10 14 225 1.4E-45 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2333 9a85575b8bb78dd4a64aaa4a55642984 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 224 5.2E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 Gene3D G3DSA:1.10.1020.10 65 168 3.9E-88 T 13-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 TIGRFAM TIGR00571 dam: DNA adenine methylase 10 283 2.0E-85 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 15 264 3.6E-66 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 192 198 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 39 53 5.9E-17 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 189 201 5.9E-17 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 15 31 5.9E-17 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 58 71 5.9E-17 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 SUPERFAMILY SSF53335 9 285 8.4E-77 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 PIRSF PIRSF000398 6 285 2.4E-74 T 13-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 TREPR_3463 838f4a8cf57f1f2c322bf9b7fcacd773 285 Gene3D G3DSA:3.40.50.150 11 251 3.9E-88 T 13-10-2018 TREPR_0119 daba51678f501b6d5abe5504276d6e1f 452 Pfam PF01554 MatE 248 408 2.0E-18 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0119 daba51678f501b6d5abe5504276d6e1f 452 Pfam PF01554 MatE 22 182 1.5E-32 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0119 daba51678f501b6d5abe5504276d6e1f 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 416 1.5E-66 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0119 daba51678f501b6d5abe5504276d6e1f 452 PIRSF PIRSF006603 2 451 1.0E-73 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2606 1f5e1abb881aede891dea7b83ed1a71d 139 SUPERFAMILY SSF46785 2 134 2.72E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2606 1f5e1abb881aede891dea7b83ed1a71d 139 Gene3D G3DSA:1.10.10.10 1 139 1.5E-41 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2606 1f5e1abb881aede891dea7b83ed1a71d 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 2.7E-34 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type TREPR_2606 1f5e1abb881aede891dea7b83ed1a71d 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 50 68 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site TREPR_2606 1f5e1abb881aede891dea7b83ed1a71d 139 Pfam PF02082 Transcriptional regulator 1 83 1.2E-21 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type TREPR_0528 4b04e568c4c1267206ec5d204fe5e63c 351 SUPERFAMILY SSF53383 23 346 6.74E-75 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0528 4b04e568c4c1267206ec5d204fe5e63c 351 Gene3D G3DSA:3.40.640.10 34 255 2.5E-113 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0528 4b04e568c4c1267206ec5d204fe5e63c 351 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 3 343 1.7E-89 T 13-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 TREPR_0528 4b04e568c4c1267206ec5d204fe5e63c 351 Gene3D G3DSA:3.90.1150.10 23 343 2.5E-113 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0528 4b04e568c4c1267206ec5d204fe5e63c 351 Pfam PF00155 Aminotransferase class I and II 30 342 9.4E-36 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 Pfam PF08220 DeoR-like helix-turn-helix domain 4 55 3.4E-16 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 Pfam PF00455 DeoR C terminal sensor domain 70 227 1.9E-41 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 SMART SM01134 67 229 1.4E-47 T 13-10-2018 TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.4E-7 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.4E-7 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 SMART SM00420 4 56 3.7E-18 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 Gene3D G3DSA:1.10.10.10 1 54 7.9E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 SUPERFAMILY SSF100950 70 229 2.21E-27 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 SUPERFAMILY SSF46785 3 67 3.04E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0132 15e8157c25e269648171efc5a18adf1f 265 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TREPR_0501 aab53e639e8dcc2f76fb7d6fb3d1eb3c 523 Pfam PF05673 Protein of unknown function (DUF815) 268 514 6.6E-82 T 13-10-2018 IPR008533 Domain of unknown function DUF815 TREPR_0501 aab53e639e8dcc2f76fb7d6fb3d1eb3c 523 SUPERFAMILY SSF52540 270 415 7.63E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0501 aab53e639e8dcc2f76fb7d6fb3d1eb3c 523 Gene3D G3DSA:3.40.50.300 277 421 2.3E-10 T 13-10-2018 TREPR_0185 3697d627fcda96f0a36fff4cae26cb0d 396 Pfam PF13458 Periplasmic binding protein 42 387 2.1E-49 T 13-10-2018 IPR028081 Leucine-binding protein domain TREPR_0185 3697d627fcda96f0a36fff4cae26cb0d 396 SUPERFAMILY SSF53822 40 390 8.99E-76 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0185 3697d627fcda96f0a36fff4cae26cb0d 396 Gene3D G3DSA:3.40.50.2300 161 293 2.4E-95 T 13-10-2018 TREPR_0185 3697d627fcda96f0a36fff4cae26cb0d 396 Gene3D G3DSA:3.40.50.2300 64 376 2.4E-95 T 13-10-2018 TREPR_3527 6d138f0de83bac62c3a45e8ad43d1772 286 Pfam PF01026 TatD related DNase 14 279 8.5E-48 T 13-10-2018 IPR001130 TatD family GO:0016788 TREPR_3527 6d138f0de83bac62c3a45e8ad43d1772 286 Gene3D G3DSA:3.20.20.140 12 286 1.1E-60 T 13-10-2018 TREPR_3527 6d138f0de83bac62c3a45e8ad43d1772 286 SUPERFAMILY SSF51556 13 281 2.51E-56 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_3527 6d138f0de83bac62c3a45e8ad43d1772 286 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 216 232 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TREPR_3527 6d138f0de83bac62c3a45e8ad43d1772 286 PIRSF PIRSF005902 1 284 5.7E-51 T 13-10-2018 IPR001130 TatD family GO:0016788 TREPR_2896 3874276fbf3018ddd148079e6d695a08 336 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 184 1.1E-34 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TREPR_2896 3874276fbf3018ddd148079e6d695a08 336 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 250 334 4.2E-6 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TREPR_2896 3874276fbf3018ddd148079e6d695a08 336 SUPERFAMILY SSF52540 6 191 7.73E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2896 3874276fbf3018ddd148079e6d695a08 336 SUPERFAMILY SSF90002 250 334 9.02E-7 T 13-10-2018 TREPR_2896 3874276fbf3018ddd148079e6d695a08 336 Gene3D G3DSA:3.40.50.300 2 199 1.9E-41 T 13-10-2018 TREPR_3349 b7143e9a8030ee5c5398b5735d4aabf2 402 PIRSF PIRSF005962 6 400 1.4E-93 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_3349 b7143e9a8030ee5c5398b5735d4aabf2 402 Pfam PF07687 Peptidase dimerisation domain 191 291 1.1E-12 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain TREPR_3349 b7143e9a8030ee5c5398b5735d4aabf2 402 SUPERFAMILY SSF53187 10 398 1.32E-55 T 13-10-2018 TREPR_3349 b7143e9a8030ee5c5398b5735d4aabf2 402 Pfam PF01546 Peptidase family M20/M25/M40 75 388 2.6E-19 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_3349 b7143e9a8030ee5c5398b5735d4aabf2 402 SUPERFAMILY SSF55031 191 299 1.79E-22 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_3349 b7143e9a8030ee5c5398b5735d4aabf2 402 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 385 3.4E-74 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_3349 b7143e9a8030ee5c5398b5735d4aabf2 402 Gene3D G3DSA:3.40.630.10 19 382 1.1E-99 T 13-10-2018 TREPR_3349 b7143e9a8030ee5c5398b5735d4aabf2 402 Gene3D G3DSA:3.30.70.360 190 304 1.1E-99 T 13-10-2018 TREPR_1839 e63265e6492fafdba0c1dafbc6a52682 585 Gene3D G3DSA:1.10.189.10 36 216 6.4E-25 T 13-10-2018 TREPR_1839 e63265e6492fafdba0c1dafbc6a52682 585 Gene3D G3DSA:3.20.20.60 224 579 9.6E-128 T 13-10-2018 TREPR_1839 e63265e6492fafdba0c1dafbc6a52682 585 Gene3D G3DSA:3.50.30.10 68 198 6.4E-25 T 13-10-2018 TREPR_1839 e63265e6492fafdba0c1dafbc6a52682 585 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 141 152 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TREPR_1839 e63265e6492fafdba0c1dafbc6a52682 585 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 469 487 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TREPR_1839 e63265e6492fafdba0c1dafbc6a52682 585 SUPERFAMILY SSF52009 80 187 7.46E-12 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TREPR_1839 e63265e6492fafdba0c1dafbc6a52682 585 Pfam PF00391 PEP-utilising enzyme, mobile domain 114 187 5.1E-10 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TREPR_1839 e63265e6492fafdba0c1dafbc6a52682 585 SUPERFAMILY SSF51621 224 577 3.45E-101 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_1839 e63265e6492fafdba0c1dafbc6a52682 585 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 223 577 4.2E-74 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 220 234 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 Gene3D G3DSA:3.40.190.80 150 274 1.1E-27 T 13-10-2018 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 1.4E-31 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 1.4E-31 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 47 67 1.4E-31 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 1.4E-31 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 186 207 1.4E-31 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 SUPERFAMILY SSF56655 13 269 5.5E-63 T 13-10-2018 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 Pfam PF00459 Inositol monophosphatase family 15 270 9.8E-51 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TREPR_0660 e39aa2bcdeb60e78b0fd3ba830944995 275 Gene3D G3DSA:3.30.540.10 11 148 4.1E-36 T 13-10-2018 TREPR_0252 8033483169534c9fd658d77fac0de932 355 Gene3D G3DSA:3.40.50.300 2 268 2.4E-76 T 13-10-2018 TREPR_0252 8033483169534c9fd658d77fac0de932 355 SUPERFAMILY SSF50331 240 343 5.87E-5 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_0252 8033483169534c9fd658d77fac0de932 355 Pfam PF00005 ABC transporter 18 164 2.7E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0252 8033483169534c9fd658d77fac0de932 355 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 2.0E-118 T 13-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 TREPR_0252 8033483169534c9fd658d77fac0de932 355 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0252 8033483169534c9fd658d77fac0de932 355 SUPERFAMILY SSF52540 3 245 1.26E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0252 8033483169534c9fd658d77fac0de932 355 SMART SM00382 27 214 2.8E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1251 8264ee39a015af91317231bb8e19c127 967 Gene3D G3DSA:1.10.287.130 329 419 1.0E-26 T 13-10-2018 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 SMART SM00387 468 587 2.6E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1251 8264ee39a015af91317231bb8e19c127 967 SUPERFAMILY SSF55874 410 588 6.81E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1251 8264ee39a015af91317231bb8e19c127 967 Gene3D G3DSA:3.40.50.2300 613 741 6.3E-33 T 13-10-2018 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 1.0E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 1.0E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 584 1.0E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 SMART SM00388 356 421 8.6E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 SUPERFAMILY SSF47226 720 865 3.01E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 SMART SM00448 618 737 1.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 SUPERFAMILY SSF47384 342 423 8.04E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 Gene3D G3DSA:1.20.120.160 760 872 2.6E-11 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 Gene3D G3DSA:3.30.565.10 420 587 9.3E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1251 8264ee39a015af91317231bb8e19c127 967 SUPERFAMILY SSF52172 617 742 4.27E-31 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1251 8264ee39a015af91317231bb8e19c127 967 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 584 1.8E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1251 8264ee39a015af91317231bb8e19c127 967 Pfam PF01627 Hpt domain 788 869 7.7E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 Pfam PF00512 His Kinase A (phospho-acceptor) domain 356 421 1.2E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1251 8264ee39a015af91317231bb8e19c127 967 Pfam PF00072 Response regulator receiver domain 621 733 2.5E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3691 b93aa0eea9503069939be8bdc9ef5342 208 Gene3D G3DSA:1.10.260.40 5 70 3.0E-10 T 13-10-2018 TREPR_3691 b93aa0eea9503069939be8bdc9ef5342 208 SUPERFAMILY SSF51306 77 206 4.19E-18 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TREPR_3691 b93aa0eea9503069939be8bdc9ef5342 208 Pfam PF01381 Helix-turn-helix 12 62 1.6E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3691 b93aa0eea9503069939be8bdc9ef5342 208 SUPERFAMILY SSF47413 5 68 1.69E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3691 b93aa0eea9503069939be8bdc9ef5342 208 Pfam PF00717 Peptidase S24-like 121 189 6.8E-5 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TREPR_3691 b93aa0eea9503069939be8bdc9ef5342 208 Gene3D G3DSA:2.10.109.10 84 208 3.2E-16 T 13-10-2018 TREPR_3691 b93aa0eea9503069939be8bdc9ef5342 208 SMART SM00530 7 62 2.1E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 Gene3D G3DSA:1.10.441.10 161 312 3.3E-122 T 13-10-2018 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 PIRSF PIRSF001480 1 410 2.6E-87 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 Gene3D G3DSA:2.60.120.10 9 287 3.3E-122 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 PRINTS PR00714 Phosphomannose isomerase type I signature 286 305 5.1E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 PRINTS PR00714 Phosphomannose isomerase type I signature 7 25 5.1E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 PRINTS PR00714 Phosphomannose isomerase type I signature 267 286 5.1E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 PRINTS PR00714 Phosphomannose isomerase type I signature 92 113 5.1E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 PRINTS PR00714 Phosphomannose isomerase type I signature 137 160 5.1E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 PRINTS PR00714 Phosphomannose isomerase type I signature 248 267 5.1E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 PRINTS PR00714 Phosphomannose isomerase type I signature 232 247 5.1E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 Pfam PF01238 Phosphomannose isomerase type I 228 370 5.5E-26 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 Pfam PF01238 Phosphomannose isomerase type I 4 169 1.9E-30 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 403 1.2E-68 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 SUPERFAMILY SSF51182 3 393 3.02E-84 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 137 145 - T 13-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 TREPR_1650 489f90eaa73bee43711dc1ee3b536d8b 415 Gene3D G3DSA:2.60.120.10 313 390 3.3E-122 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_3334 399465d65b4bcb42f6ea80d076b6c457 454 PIRSF PIRSF000521 229 454 1.1E-28 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TREPR_3334 399465d65b4bcb42f6ea80d076b6c457 454 PIRSF PIRSF000521 57 218 2.3E-14 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TREPR_3334 399465d65b4bcb42f6ea80d076b6c457 454 Gene3D G3DSA:3.90.1150.10 75 448 1.3E-131 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3334 399465d65b4bcb42f6ea80d076b6c457 454 SUPERFAMILY SSF53383 66 454 3.8E-119 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3334 399465d65b4bcb42f6ea80d076b6c457 454 Pfam PF00202 Aminotransferase class-III 71 454 4.4E-111 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TREPR_3334 399465d65b4bcb42f6ea80d076b6c457 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 277 314 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TREPR_3334 399465d65b4bcb42f6ea80d076b6c457 454 Gene3D G3DSA:3.40.640.10 110 359 1.3E-131 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3334 399465d65b4bcb42f6ea80d076b6c457 454 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 67 452 5.6E-132 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00364 254 273 5.8 T 13-10-2018 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00364 383 402 0.54 T 13-10-2018 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00364 429 448 430.0 T 13-10-2018 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00364 75 95 52.0 T 13-10-2018 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00364 231 250 7.0 T 13-10-2018 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00369 383 405 6.1 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00369 122 145 330.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00369 314 336 220.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00369 254 277 0.35 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00369 406 429 13.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00369 75 99 26.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SMART SM00369 231 253 5.3 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 Pfam PF13855 Leucine rich repeat 232 285 5.4E-9 T 13-10-2018 IPR001611 Leucine-rich repeat GO:0005515 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 Pfam PF13855 Leucine rich repeat 386 442 8.1E-10 T 13-10-2018 IPR001611 Leucine-rich repeat GO:0005515 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 Gene3D G3DSA:3.80.10.10 1 172 4.5E-26 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 SUPERFAMILY SSF52047 44 450 1.57E-49 T 13-10-2018 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 Gene3D G3DSA:3.80.10.10 173 348 9.6E-32 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 Gene3D G3DSA:3.80.10.10 349 467 2.2E-25 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 PRINTS PR00019 Leucine-rich repeat signature 234 247 2.5E-5 T 13-10-2018 TREPR_0617 bd7c1bc94d59a1647195c05919ad3d01 467 PRINTS PR00019 Leucine-rich repeat signature 383 396 2.5E-5 T 13-10-2018 TREPR_1301 022ca924d6e149c25b72f16d5f3c4a45 138 Gene3D G3DSA:3.40.50.280 1 137 1.0E-40 T 13-10-2018 TREPR_1301 022ca924d6e149c25b72f16d5f3c4a45 138 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 3 135 4.5E-64 T 13-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TREPR_1301 022ca924d6e149c25b72f16d5f3c4a45 138 Pfam PF02310 B12 binding domain 5 127 1.7E-15 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_1301 022ca924d6e149c25b72f16d5f3c4a45 138 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 137 39.434 T 13-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TREPR_1301 022ca924d6e149c25b72f16d5f3c4a45 138 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 3 134 7.0E-17 T 13-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TREPR_1301 022ca924d6e149c25b72f16d5f3c4a45 138 SUPERFAMILY SSF52242 4 134 2.09E-36 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_0100 97b049e039fa4fd73c20fc19b219dd22 130 Pfam PF03050 Transposase IS66 family 65 110 7.7E-9 T 13-10-2018 IPR004291 Transposase, IS66 TREPR_0100 97b049e039fa4fd73c20fc19b219dd22 130 Pfam PF13005 zinc-finger binding domain of transposase IS66 1 35 1.5E-9 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 TREPR_1778 bc308ffea75c4aa600d7dbc67c763ebb 149 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 8 133 1.6E-34 T 13-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 TREPR_1778 bc308ffea75c4aa600d7dbc67c763ebb 149 ProSitePatterns PS00550 Hemerythrin family signature. 63 86 - T 13-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 TREPR_1778 bc308ffea75c4aa600d7dbc67c763ebb 149 Pfam PF01814 Hemerythrin HHE cation binding domain 16 130 2.7E-11 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TREPR_1778 bc308ffea75c4aa600d7dbc67c763ebb 149 Gene3D G3DSA:1.20.120.50 2 138 4.3E-36 T 13-10-2018 IPR035938 Hemerythrin-like superfamily TREPR_1778 bc308ffea75c4aa600d7dbc67c763ebb 149 SUPERFAMILY SSF47188 4 132 2.62E-32 T 13-10-2018 IPR035938 Hemerythrin-like superfamily TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 882 898 4.7E-7 T 13-10-2018 TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1058 1070 4.7E-7 T 13-10-2018 TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 917 931 4.7E-7 T 13-10-2018 TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 SUPERFAMILY SSF53335 795 1225 7.28E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 SUPERFAMILY SSF52980 21 151 1.5E-6 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 Gene3D G3DSA:3.40.50.300 415 635 4.7E-32 T 13-10-2018 TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 SMART SM00490 522 610 2.4E-4 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 Pfam PF13156 Restriction endonuclease 34 169 1.7E-40 T 13-10-2018 IPR039442 Mrr-like domain TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 SMART SM00487 176 410 3.4E-10 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 Gene3D G3DSA:3.40.50.300 168 401 1.3E-23 T 13-10-2018 TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 Pfam PF00271 Helicase conserved C-terminal domain 493 609 2.2E-7 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 1061 1067 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 SUPERFAMILY SSF52540 195 621 2.66E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 Pfam PF04851 Type III restriction enzyme, res subunit 178 381 1.1E-26 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TREPR_3115 3a98f57ab722ed8aaf809c992237c6a3 1659 Gene3D G3DSA:3.40.50.150 861 1277 2.7E-37 T 13-10-2018 TREPR_2775 54da754342f15691b0ef4c05a0eb099a 846 Pfam PF11897 Protein of unknown function (DUF3417) 12 116 9.8E-30 T 13-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TREPR_2775 54da754342f15691b0ef4c05a0eb099a 846 Pfam PF00343 Carbohydrate phosphorylase 265 616 1.8E-23 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TREPR_2775 54da754342f15691b0ef4c05a0eb099a 846 Pfam PF00343 Carbohydrate phosphorylase 120 198 7.8E-6 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TREPR_2775 54da754342f15691b0ef4c05a0eb099a 846 SUPERFAMILY SSF53756 8 736 8.64E-207 T 13-10-2018 TREPR_2775 54da754342f15691b0ef4c05a0eb099a 846 PIRSF PIRSF000460 1 790 3.7E-273 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TREPR_2775 54da754342f15691b0ef4c05a0eb099a 846 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 594 606 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TREPR_2775 54da754342f15691b0ef4c05a0eb099a 846 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 103 704 1.4E-259 T 13-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TREPR_2775 54da754342f15691b0ef4c05a0eb099a 846 Gene3D G3DSA:3.40.50.2000 406 742 7.4E-40 T 13-10-2018 TREPR_2775 54da754342f15691b0ef4c05a0eb099a 846 Gene3D G3DSA:3.40.50.2000 110 208 1.2E-11 T 13-10-2018 TREPR_3014 b370b863d15b776903ef8f3b433acbac 542 Pfam PF06418 CTP synthase N-terminus 3 267 5.2E-117 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TREPR_3014 b370b863d15b776903ef8f3b433acbac 542 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.0E-221 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TREPR_3014 b370b863d15b776903ef8f3b433acbac 542 Hamap MF_01227 CTP synthase [pyrG]. 2 540 46.297 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TREPR_3014 b370b863d15b776903ef8f3b433acbac 542 Gene3D G3DSA:3.40.50.300 1 287 5.3E-123 T 13-10-2018 TREPR_3014 b370b863d15b776903ef8f3b433acbac 542 SUPERFAMILY SSF52540 1 270 1.9E-109 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3014 b370b863d15b776903ef8f3b433acbac 542 Gene3D G3DSA:3.40.50.880 289 542 5.4E-93 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_3014 b370b863d15b776903ef8f3b433acbac 542 Pfam PF00117 Glutamine amidotransferase class-I 303 534 5.2E-49 T 13-10-2018 IPR017926 Glutamine amidotransferase TREPR_3014 b370b863d15b776903ef8f3b433acbac 542 SUPERFAMILY SSF52317 291 540 2.69E-72 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0513 82417485c189f0317836e216ed2ead84 294 SUPERFAMILY SSF52467 4 277 2.99E-66 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TREPR_0513 82417485c189f0317836e216ed2ead84 294 Gene3D G3DSA:3.30.1600.10 32 52 6.8E-11 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily TREPR_0513 82417485c189f0317836e216ed2ead84 294 Gene3D G3DSA:3.40.50.1220 15 31 6.8E-11 T 13-10-2018 TREPR_0513 82417485c189f0317836e216ed2ead84 294 Gene3D G3DSA:3.30.1600.10 91 213 7.0E-51 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily TREPR_0513 82417485c189f0317836e216ed2ead84 294 Pfam PF02146 Sir2 family 23 46 3.9E-6 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 TREPR_0513 82417485c189f0317836e216ed2ead84 294 Pfam PF02146 Sir2 family 92 243 5.5E-35 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 TREPR_0513 82417485c189f0317836e216ed2ead84 294 Gene3D G3DSA:3.40.50.1220 123 276 7.0E-51 T 13-10-2018 TREPR_3404 3c586e1a012b05e674ffcdf4e9a79a14 492 SUPERFAMILY SSF46689 421 470 3.27E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3404 3c586e1a012b05e674ffcdf4e9a79a14 492 Gene3D G3DSA:1.10.10.60 419 471 4.3E-19 T 13-10-2018 TREPR_3404 3c586e1a012b05e674ffcdf4e9a79a14 492 SMART SM00342 385 468 9.2E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_3404 3c586e1a012b05e674ffcdf4e9a79a14 492 SUPERFAMILY SSF46689 369 419 5.98E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3404 3c586e1a012b05e674ffcdf4e9a79a14 492 Gene3D G3DSA:1.10.10.60 368 418 8.0E-15 T 13-10-2018 TREPR_3404 3c586e1a012b05e674ffcdf4e9a79a14 492 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 452 468 2.6E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_3404 3c586e1a012b05e674ffcdf4e9a79a14 492 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 437 452 2.6E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_3404 3c586e1a012b05e674ffcdf4e9a79a14 492 Pfam PF12833 Helix-turn-helix domain 392 468 3.7E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_3404 3c586e1a012b05e674ffcdf4e9a79a14 492 Pfam PF10114 Sensory domain found in PocR 86 218 1.7E-15 T 13-10-2018 IPR018771 PocR domain TREPR_3068 aa30c6425e6f98a1e3d4cbcfe9639d6e 257 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 233 6.6E-17 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_3068 aa30c6425e6f98a1e3d4cbcfe9639d6e 257 Gene3D G3DSA:3.40.50.300 1 255 4.4E-57 T 13-10-2018 TREPR_3068 aa30c6425e6f98a1e3d4cbcfe9639d6e 257 SUPERFAMILY SSF52540 1 253 1.29E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3068 aa30c6425e6f98a1e3d4cbcfe9639d6e 257 PIRSF PIRSF005647 1 257 1.5E-75 T 13-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type TREPR_3881 72cb0a240f384ea3184e1457146d6128 573 Gene3D G3DSA:3.80.30.20 205 419 1.3E-14 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TREPR_3881 72cb0a240f384ea3184e1457146d6128 573 SUPERFAMILY SSF102114 193 405 9.16E-35 T 13-10-2018 TREPR_3881 72cb0a240f384ea3184e1457146d6128 573 Pfam PF02310 B12 binding domain 13 142 4.4E-10 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_3881 72cb0a240f384ea3184e1457146d6128 573 Pfam PF04055 Radical SAM superfamily 202 376 1.0E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_3881 72cb0a240f384ea3184e1457146d6128 573 SMART SM00729 196 419 6.4E-27 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_3881 72cb0a240f384ea3184e1457146d6128 573 Gene3D G3DSA:3.40.50.280 39 150 1.6E-5 T 13-10-2018 TREPR_2328 2bf7feef0530d61edd75567bedc23f8f 625 SUPERFAMILY SSF56519 57 250 1.83E-39 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TREPR_2328 2bf7feef0530d61edd75567bedc23f8f 625 Gene3D G3DSA:3.90.1310.10 61 233 3.5E-38 T 13-10-2018 TREPR_2328 2bf7feef0530d61edd75567bedc23f8f 625 Gene3D G3DSA:3.30.1390.30 83 159 3.5E-38 T 13-10-2018 TREPR_2328 2bf7feef0530d61edd75567bedc23f8f 625 Gene3D G3DSA:3.40.710.10 246 608 1.4E-95 T 13-10-2018 TREPR_2328 2bf7feef0530d61edd75567bedc23f8f 625 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 582 2.6E-71 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TREPR_2328 2bf7feef0530d61edd75567bedc23f8f 625 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 16 600 4.1E-184 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TREPR_2328 2bf7feef0530d61edd75567bedc23f8f 625 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 232 2.6E-43 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TREPR_2328 2bf7feef0530d61edd75567bedc23f8f 625 SUPERFAMILY SSF56601 251 595 5.26E-89 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TREPR_1282 d6e35190b9b81e6a06f2242d6df56dc5 241 Pfam PF16481 Domain of unknown function (DUF5058) 9 230 4.8E-60 T 13-10-2018 IPR032479 Protein of unknown function DUF5058 TREPR_0598 969c856064fb2d731fd5b2ce2a37f62e 148 Pfam PF00075 RNase H 3 144 1.0E-45 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 TREPR_0598 969c856064fb2d731fd5b2ce2a37f62e 148 Gene3D G3DSA:3.30.420.10 1 148 1.3E-53 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_0598 969c856064fb2d731fd5b2ce2a37f62e 148 SUPERFAMILY SSF53098 3 144 6.96E-52 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_0598 969c856064fb2d731fd5b2ce2a37f62e 148 Hamap MF_00042 Ribonuclease H [rnhA]. 1 147 28.409 T 13-10-2018 IPR022892 Ribonuclease HI GO:0004523 TREPR_3804 fa9fc78cd710073e3793bd191828126f 243 SUPERFAMILY SSF51735 103 242 1.71E-14 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3804 fa9fc78cd710073e3793bd191828126f 243 Gene3D G3DSA:1.10.10.10 1 56 6.8E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3804 fa9fc78cd710073e3793bd191828126f 243 Pfam PF02629 CoA binding domain 105 216 1.8E-8 T 13-10-2018 IPR003781 CoA-binding GO:0048037 TREPR_3804 fa9fc78cd710073e3793bd191828126f 243 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 1 243 17.57 T 13-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 TREPR_3804 fa9fc78cd710073e3793bd191828126f 243 Pfam PF06971 Putative DNA-binding protein N-terminus 3 48 3.1E-6 T 13-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 TREPR_3804 fa9fc78cd710073e3793bd191828126f 243 Gene3D G3DSA:3.40.50.720 97 243 1.0E-35 T 13-10-2018 TREPR_3804 fa9fc78cd710073e3793bd191828126f 243 SUPERFAMILY SSF46785 13 52 5.44E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1308 90ca33309148baec8c49e9a4cfc30d8b 481 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 17 178 3.8E-48 T 13-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 TREPR_1308 90ca33309148baec8c49e9a4cfc30d8b 481 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 191 476 2.8E-81 T 13-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 TREPR_1308 90ca33309148baec8c49e9a4cfc30d8b 481 Gene3D G3DSA:1.10.4200.10 365 480 3.8E-10 T 13-10-2018 TREPR_1308 90ca33309148baec8c49e9a4cfc30d8b 481 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 177 481 120.895 T 13-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 TREPR_1308 90ca33309148baec8c49e9a4cfc30d8b 481 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 16 178 2.9E-41 T 13-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 TREPR_2533 96c771fb93d50d1974854bd2b435a587 371 Gene3D G3DSA:3.40.50.720 135 276 1.4E-18 T 13-10-2018 TREPR_2533 96c771fb93d50d1974854bd2b435a587 371 SUPERFAMILY SSF54373 247 315 1.51E-23 T 13-10-2018 TREPR_2533 96c771fb93d50d1974854bd2b435a587 371 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 4 369 1.2E-122 T 13-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 TREPR_2533 96c771fb93d50d1974854bd2b435a587 371 Pfam PF03275 UDP-galactopyranose mutase 148 351 1.8E-72 T 13-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 TREPR_2533 96c771fb93d50d1974854bd2b435a587 371 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 74 1.5E-18 T 13-10-2018 TREPR_2533 96c771fb93d50d1974854bd2b435a587 371 Gene3D G3DSA:3.40.50.720 310 371 6.2E-12 T 13-10-2018 TREPR_2533 96c771fb93d50d1974854bd2b435a587 371 Gene3D G3DSA:3.40.50.720 4 97 2.1E-31 T 13-10-2018 TREPR_2533 96c771fb93d50d1974854bd2b435a587 371 SUPERFAMILY SSF51971 4 367 1.47E-46 T 13-10-2018 TREPR_3739 aec72b6fbab4e50cc7b8d65d0c34b41f 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 228 4.3E-45 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TREPR_3739 aec72b6fbab4e50cc7b8d65d0c34b41f 336 SUPERFAMILY SSF51735 1 335 1.65E-67 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3739 aec72b6fbab4e50cc7b8d65d0c34b41f 336 Gene3D G3DSA:3.90.25.10 173 330 3.1E-68 T 13-10-2018 TREPR_3739 aec72b6fbab4e50cc7b8d65d0c34b41f 336 Gene3D G3DSA:3.40.50.720 4 319 3.1E-68 T 13-10-2018 TREPR_0254 6cf8ec15d7689bfb3653f0bdd3f1f2a4 281 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 277 7.8E-116 T 13-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 TREPR_0254 6cf8ec15d7689bfb3653f0bdd3f1f2a4 281 Gene3D G3DSA:1.10.3720.10 20 278 3.1E-64 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0254 6cf8ec15d7689bfb3653f0bdd3f1f2a4 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 278 6.9E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0254 6cf8ec15d7689bfb3653f0bdd3f1f2a4 281 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 273 2.5E-95 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TREPR_0254 6cf8ec15d7689bfb3653f0bdd3f1f2a4 281 SUPERFAMILY SSF161098 20 271 2.99E-53 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 SUPERFAMILY SSF51735 83 274 2.96E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 SUPERFAMILY SSF55021 316 387 1.01E-13 T 13-10-2018 TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 140 167 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 Gene3D G3DSA:3.30.70.260 308 387 1.1E-17 T 13-10-2018 TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 306 4.0E-17 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 Gene3D G3DSA:3.40.50.720 22 303 5.3E-72 T 13-10-2018 TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 SUPERFAMILY SSF52283 19 103 1.4E-17 T 13-10-2018 TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 125 274 1.1E-40 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TREPR_3802 372afca0ed5f1aed9ce8b685c8bc69f0 391 Gene3D G3DSA:3.40.50.720 84 278 5.3E-72 T 13-10-2018 TREPR_3239 d3cb798e31dea7186ce8de478fe44d4f 118 Pfam PF03788 LrgA family 15 106 2.9E-22 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 TREPR_2954 d5e39c7f575f2e6b54921ccaf1c36b36 650 Pfam PF00367 phosphotransferase system, EIIB 11 42 1.2E-14 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 TREPR_2954 d5e39c7f575f2e6b54921ccaf1c36b36 650 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 TREPR_2954 d5e39c7f575f2e6b54921ccaf1c36b36 650 SUPERFAMILY SSF51261 500 648 1.74E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_2954 d5e39c7f575f2e6b54921ccaf1c36b36 650 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 504 628 3.0E-41 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 TREPR_2954 d5e39c7f575f2e6b54921ccaf1c36b36 650 Gene3D G3DSA:2.70.70.10 493 649 4.9E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_2954 d5e39c7f575f2e6b54921ccaf1c36b36 650 Pfam PF02378 Phosphotransferase system, EIIC 115 408 3.9E-28 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 TREPR_2954 d5e39c7f575f2e6b54921ccaf1c36b36 650 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 505 625 4.9E-36 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 TREPR_2954 d5e39c7f575f2e6b54921ccaf1c36b36 650 Gene3D G3DSA:3.30.1360.60 1 79 1.9E-25 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 TREPR_2954 d5e39c7f575f2e6b54921ccaf1c36b36 650 SUPERFAMILY SSF55604 8 80 1.57E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 TREPR_0636 7c717d8d41ab4015db0c31312934712b 410 Pfam PF13394 4Fe-4S single cluster domain 25 105 6.7E-7 T 13-10-2018 TREPR_0636 7c717d8d41ab4015db0c31312934712b 410 Gene3D G3DSA:3.20.20.70 14 337 4.6E-38 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0636 7c717d8d41ab4015db0c31312934712b 410 SUPERFAMILY SSF102114 17 345 2.94E-38 T 13-10-2018 TREPR_0636 7c717d8d41ab4015db0c31312934712b 410 Pfam PF04055 Radical SAM superfamily 27 189 4.2E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_1789 369304777f9d41ef29fff020dca53287 236 Pfam PF00849 RNA pseudouridylate synthase 36 175 9.3E-25 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1789 369304777f9d41ef29fff020dca53287 236 SUPERFAMILY SSF55120 22 232 1.76E-50 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1789 369304777f9d41ef29fff020dca53287 236 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 71 85 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1789 369304777f9d41ef29fff020dca53287 236 Gene3D G3DSA:3.30.2350.10 21 228 3.9E-49 T 13-10-2018 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 375 41.49 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 SUPERFAMILY SSF55347 120 258 2.81E-52 T 13-10-2018 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 SUPERFAMILY SSF51735 2 144 3.53E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 Gene3D G3DSA:1.10.1740.10 296 379 6.7E-26 T 13-10-2018 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 140 223 7.1E-36 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 373 1.5E-110 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 Pfam PF13288 DXP reductoisomerase C-terminal domain 255 370 6.4E-33 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 Gene3D G3DSA:3.40.50.720 1 144 6.0E-37 T 13-10-2018 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 PIRSF PIRSF006205 2 382 1.2E-131 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 SUPERFAMILY SSF69055 287 376 1.44E-27 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TREPR_2675 8efe94748834e0dbd1338adb9b1f8b8b 382 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 125 4.2E-27 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TREPR_2898 d4ad3ca4ae8404b103c06e5e1386f0d9 267 SUPERFAMILY SSF51717 1 260 7.2E-70 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2898 d4ad3ca4ae8404b103c06e5e1386f0d9 267 Pfam PF00809 Pterin binding enzyme 7 228 4.3E-27 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2898 d4ad3ca4ae8404b103c06e5e1386f0d9 267 Gene3D G3DSA:3.20.20.20 1 266 1.5E-88 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 Gene3D G3DSA:3.50.30.10 6 232 1.2E-67 T 13-10-2018 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 Gene3D G3DSA:1.10.274.10 23 145 1.2E-67 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 PIRSF PIRSF000732 1 539 6.6E-185 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 Gene3D G3DSA:3.20.20.60 233 539 2.0E-110 T 13-10-2018 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 463 478 1.8E-19 T 13-10-2018 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 292 311 1.8E-19 T 13-10-2018 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 499 511 1.8E-19 T 13-10-2018 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 446 461 1.8E-19 T 13-10-2018 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 126 3.2E-30 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 SUPERFAMILY SSF52009 125 243 1.31E-27 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 539 2.9E-172 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 538 4.1E-102 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 SUPERFAMILY SSF47831 25 143 3.27E-34 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 446 464 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 SUPERFAMILY SSF51621 248 538 7.59E-100 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_2962 8999d58bc519ed226fc911a62860a5e8 539 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 224 4.4E-17 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TREPR_1599 d909b7ce3c61e3c5388d693e208c1300 571 Gene3D G3DSA:3.40.50.1820 29 562 3.6E-100 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1599 d909b7ce3c61e3c5388d693e208c1300 571 SUPERFAMILY SSF53474 40 544 2.81E-84 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1599 d909b7ce3c61e3c5388d693e208c1300 571 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 225 240 - T 13-10-2018 IPR019826 Carboxylesterase type B, active site TREPR_1599 d909b7ce3c61e3c5388d693e208c1300 571 Pfam PF00135 Carboxylesterase family 40 548 4.3E-80 T 13-10-2018 IPR002018 Carboxylesterase, type B TREPR_3678 f49a1d7dcbcb49eec2a28ccb0860408b 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 117 9.3E-19 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TREPR_3678 f49a1d7dcbcb49eec2a28ccb0860408b 129 Gene3D G3DSA:1.20.1290.10 3 127 2.9E-40 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TREPR_3678 f49a1d7dcbcb49eec2a28ccb0860408b 129 SUPERFAMILY SSF69118 3 125 5.89E-33 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TREPR_2318 ac304cc41278ad7eda051f07219c9ca1 313 SUPERFAMILY SSF56281 1 310 4.72E-38 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2318 ac304cc41278ad7eda051f07219c9ca1 313 Gene3D G3DSA:3.60.15.10 54 313 8.2E-40 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2318 ac304cc41278ad7eda051f07219c9ca1 313 Pfam PF12706 Beta-lactamase superfamily domain 74 272 1.4E-18 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2153 988c667dc075fba6eed360d6a12c616e 388 Gene3D G3DSA:1.10.3210.10 3 322 2.0E-50 T 13-10-2018 TREPR_2153 988c667dc075fba6eed360d6a12c616e 388 SUPERFAMILY SSF109604 146 318 1.4E-16 T 13-10-2018 TREPR_2153 988c667dc075fba6eed360d6a12c616e 388 Pfam PF13487 HD domain 213 274 2.4E-12 T 13-10-2018 TREPR_1211 b35e52514657da1cadcba4643e965c76 216 Gene3D G3DSA:1.10.340.30 32 149 2.6E-57 T 13-10-2018 TREPR_1211 b35e52514657da1cadcba4643e965c76 216 SUPERFAMILY SSF48150 18 191 3.1E-11 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TREPR_1211 b35e52514657da1cadcba4643e965c76 216 Gene3D G3DSA:1.10.1670.10 19 216 2.6E-57 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TREPR_1969 9deb686d7cf4f655c83e75cf9ce9cf09 293 SUPERFAMILY SSF101386 24 124 8.58E-20 T 13-10-2018 TREPR_1969 9deb686d7cf4f655c83e75cf9ce9cf09 293 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 188 262 8.7E-8 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TREPR_1969 9deb686d7cf4f655c83e75cf9ce9cf09 293 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 46 119 8.5E-21 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TREPR_1969 9deb686d7cf4f655c83e75cf9ce9cf09 293 SUPERFAMILY SSF101386 156 269 6.54E-23 T 13-10-2018 TREPR_1969 9deb686d7cf4f655c83e75cf9ce9cf09 293 Gene3D G3DSA:1.10.287.1080 148 293 7.9E-44 T 13-10-2018 TREPR_1969 9deb686d7cf4f655c83e75cf9ce9cf09 293 TIGRFAM TIGR00444 mazG: MazG family protein 31 290 3.3E-83 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG TREPR_1969 9deb686d7cf4f655c83e75cf9ce9cf09 293 Gene3D G3DSA:1.10.287.1080 21 142 7.1E-35 T 13-10-2018 TREPR_1999 637b07404423a214e098ebf0f1410d3e 158 Gene3D G3DSA:2.60.120.1140 33 157 1.8E-41 T 13-10-2018 IPR038695 Saro_0823-like superfamily TREPR_1999 637b07404423a214e098ebf0f1410d3e 158 Pfam PF02643 Uncharacterized ACR, COG1430 55 153 3.4E-32 T 13-10-2018 IPR003795 Protein of unknown function DUF192 TREPR_1833 c13ef854961c8e56ef09437aeee89f9a 424 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TREPR_1833 c13ef854961c8e56ef09437aeee89f9a 424 Pfam PF00483 Nucleotidyl transferase 6 270 3.3E-59 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TREPR_1833 c13ef854961c8e56ef09437aeee89f9a 424 Gene3D G3DSA:3.90.550.10 1 290 3.4E-86 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1833 c13ef854961c8e56ef09437aeee89f9a 424 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 389 1.5E-131 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TREPR_1833 c13ef854961c8e56ef09437aeee89f9a 424 SUPERFAMILY SSF53448 4 387 6.34E-71 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1833 c13ef854961c8e56ef09437aeee89f9a 424 SUPERFAMILY SSF51161 294 424 1.94E-18 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily TREPR_1833 c13ef854961c8e56ef09437aeee89f9a 424 Gene3D G3DSA:2.160.10.10 291 424 3.2E-36 T 13-10-2018 TREPR_1833 c13ef854961c8e56ef09437aeee89f9a 424 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TREPR_1833 c13ef854961c8e56ef09437aeee89f9a 424 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 14 376 1.1E-119 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 Pfam PF01926 50S ribosome-binding GTPase 206 336 5.3E-19 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 Gene3D G3DSA:3.40.50.11060 23 145 9.1E-33 T 13-10-2018 TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 PIRSF PIRSF006809 4 435 1.2E-131 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 Pfam PF16360 GTP-binding GTPase Middle Region 120 199 8.4E-28 T 13-10-2018 IPR032305 GTP-binding protein, middle domain TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 Gene3D G3DSA:3.40.50.300 204 380 8.8E-41 T 13-10-2018 TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 Hamap MF_00900 GTPase HflX [hflX]. 33 404 43.803 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 SUPERFAMILY SSF52540 206 396 2.75E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 272 290 5.7E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 206 226 5.7E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_0639 bb5892f7eeb7a3d74a5f6f0a3a0d6015 447 Pfam PF13167 GTP-binding GTPase N-terminal 32 118 1.2E-22 T 13-10-2018 IPR025121 GTPase HflX, N-terminal TREPR_3668 a830f8ce98d1a61fe7ff50d4f06ea490 346 Gene3D G3DSA:3.20.20.70 5 341 8.0E-115 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3668 a830f8ce98d1a61fe7ff50d4f06ea490 346 Pfam PF04055 Radical SAM superfamily 49 212 4.1E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_3668 a830f8ce98d1a61fe7ff50d4f06ea490 346 SMART SM00876 221 314 6.9E-5 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TREPR_3668 a830f8ce98d1a61fe7ff50d4f06ea490 346 SMART SM00729 45 250 3.4E-18 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_3668 a830f8ce98d1a61fe7ff50d4f06ea490 346 PIRSF PIRSF004762 6 323 1.3E-71 T 13-10-2018 TREPR_3668 a830f8ce98d1a61fe7ff50d4f06ea490 346 TIGRFAM TIGR03956 rSAM_HydE: [FeFe] hydrogenase H-cluster radical SAM maturase HydE 11 335 9.5E-160 T 13-10-2018 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM TREPR_3668 a830f8ce98d1a61fe7ff50d4f06ea490 346 SUPERFAMILY SSF102114 20 286 7.85E-54 T 13-10-2018 TREPR_2126 38027160981e1591638fbd3b6320b1a5 433 Pfam PF00501 AMP-binding enzyme 78 284 4.4E-13 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TREPR_2126 38027160981e1591638fbd3b6320b1a5 433 Gene3D G3DSA:3.30.300.30 326 433 2.2E-32 T 13-10-2018 TREPR_2126 38027160981e1591638fbd3b6320b1a5 433 SUPERFAMILY SSF56801 44 400 2.22E-54 T 13-10-2018 TREPR_2126 38027160981e1591638fbd3b6320b1a5 433 Gene3D G3DSA:3.40.50.12780 2 325 1.3E-123 T 13-10-2018 TREPR_2126 38027160981e1591638fbd3b6320b1a5 433 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 431 8.1E-30 T 13-10-2018 IPR028154 AMP-dependent ligase, C-terminal TREPR_2126 38027160981e1591638fbd3b6320b1a5 433 PIRSF PIRSF006444 1 433 1.8E-193 T 13-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 TREPR_0590 d29ec5eeb4ed2f5ace2e8d2a28246a51 541 SUPERFAMILY SSF51735 14 318 6.69E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0590 d29ec5eeb4ed2f5ace2e8d2a28246a51 541 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 41 190 1.2E-9 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 TREPR_0590 d29ec5eeb4ed2f5ace2e8d2a28246a51 541 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 243 482 1.7E-29 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 TREPR_0590 d29ec5eeb4ed2f5ace2e8d2a28246a51 541 SUPERFAMILY SSF48179 322 539 1.26E-37 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TREPR_0590 d29ec5eeb4ed2f5ace2e8d2a28246a51 541 Gene3D G3DSA:1.10.1040.10 321 540 1.1E-53 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TREPR_0590 d29ec5eeb4ed2f5ace2e8d2a28246a51 541 Gene3D G3DSA:3.40.50.720 18 317 1.0E-71 T 13-10-2018 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 Gene3D G3DSA:1.10.601.10 2 135 3.6E-40 T 13-10-2018 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 90 103 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 SUPERFAMILY SSF88946 25 135 1.88E-41 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 64 288 7.5E-36 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 Gene3D G3DSA:1.10.10.10 139 215 1.2E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3818 1062f09416f4689bd80204e847827bd6 300 Pfam PF04545 Sigma-70, region 4 235 288 1.7E-17 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 SUPERFAMILY SSF88659 139 214 1.48E-8 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_3818 1062f09416f4689bd80204e847827bd6 300 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 260 286 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 Pfam PF00140 Sigma-70 factor, region 1.2 30 60 2.0E-9 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 Gene3D G3DSA:1.10.10.10 216 300 5.5E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3818 1062f09416f4689bd80204e847827bd6 300 Pfam PF04542 Sigma-70 region 2 66 134 3.2E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 SUPERFAMILY SSF88659 200 291 2.62E-24 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_3818 1062f09416f4689bd80204e847827bd6 300 Pfam PF04539 Sigma-70 region 3 147 222 1.2E-11 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 PRINTS PR00046 Major sigma-70 factor signature 90 103 1.5E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 PRINTS PR00046 Major sigma-70 factor signature 239 251 1.5E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 PRINTS PR00046 Major sigma-70 factor signature 275 286 1.5E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 PRINTS PR00046 Major sigma-70 factor signature 260 275 1.5E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3818 1062f09416f4689bd80204e847827bd6 300 PRINTS PR00046 Major sigma-70 factor signature 114 122 1.5E-24 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_0543 7299eeef3b5da8024f734a1eed5868cc 176 SUPERFAMILY SSF52540 2 176 4.18E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0543 7299eeef3b5da8024f734a1eed5868cc 176 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 174 1.1E-36 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TREPR_0543 7299eeef3b5da8024f734a1eed5868cc 176 PIRSF PIRSF006135 1 176 4.9E-33 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TREPR_0543 7299eeef3b5da8024f734a1eed5868cc 176 Gene3D G3DSA:3.40.50.300 2 176 2.8E-37 T 13-10-2018 TREPR_3379 c88fd955159c13ae5436beeef87d9b4e 101 Gene3D G3DSA:3.30.70.1290 1 78 6.1E-10 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TREPR_3379 c88fd955159c13ae5436beeef87d9b4e 101 SUPERFAMILY SSF143422 1 52 3.34E-5 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TREPR_1239 6fe68df70d15ae692210ce9f942d3beb 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 95 5.8E-9 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TREPR_1239 6fe68df70d15ae692210ce9f942d3beb 102 Gene3D G3DSA:3.30.2310.20 1 99 3.5E-11 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_2651 860966c0f602a2400e00f612ec320fcb 359 Gene3D G3DSA:3.20.20.20 1 253 4.4E-75 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2651 860966c0f602a2400e00f612ec320fcb 359 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 358 26.927 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TREPR_2651 860966c0f602a2400e00f612ec320fcb 359 Gene3D G3DSA:3.30.413.10 266 359 1.8E-26 T 13-10-2018 TREPR_2651 860966c0f602a2400e00f612ec320fcb 359 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3 349 1.4E-95 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TREPR_2651 860966c0f602a2400e00f612ec320fcb 359 PIRSF PIRSF004640 1 359 1.1E-110 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TREPR_2651 860966c0f602a2400e00f612ec320fcb 359 Pfam PF04551 GcpE protein 2 356 4.5E-107 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TREPR_2651 860966c0f602a2400e00f612ec320fcb 359 SUPERFAMILY SSF56014 270 341 1.28E-9 T 13-10-2018 TREPR_1460 89381896988b6d6cde9dc08e6a6d9165 135 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 128 8.0E-34 T 13-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 TREPR_1460 89381896988b6d6cde9dc08e6a6d9165 135 Pfam PF01814 Hemerythrin HHE cation binding domain 13 125 7.1E-11 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TREPR_1460 89381896988b6d6cde9dc08e6a6d9165 135 Gene3D G3DSA:1.20.120.50 1 134 9.2E-35 T 13-10-2018 IPR035938 Hemerythrin-like superfamily TREPR_1460 89381896988b6d6cde9dc08e6a6d9165 135 SUPERFAMILY SSF47188 1 129 7.06E-31 T 13-10-2018 IPR035938 Hemerythrin-like superfamily TREPR_0968 0a421e337cee03bf02f664fdde457a3b 117 Gene3D G3DSA:1.10.260.40 11 115 2.8E-9 T 13-10-2018 TREPR_0968 0a421e337cee03bf02f664fdde457a3b 117 SUPERFAMILY SSF47413 8 75 2.06E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0968 0a421e337cee03bf02f664fdde457a3b 117 Pfam PF01381 Helix-turn-helix 15 69 5.3E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_0968 0a421e337cee03bf02f664fdde457a3b 117 SMART SM00530 14 69 4.5E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_0850 558415b18ffe383d87f102b81077da47 63 SUPERFAMILY SSF143800 1 57 7.06E-23 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0850 558415b18ffe383d87f102b81077da47 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 63 17.266 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_0850 558415b18ffe383d87f102b81077da47 63 Gene3D G3DSA:2.30.170.40 2 62 5.2E-20 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0850 558415b18ffe383d87f102b81077da47 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 2.9E-23 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_0850 558415b18ffe383d87f102b81077da47 63 Pfam PF00830 Ribosomal L28 family 3 56 9.8E-22 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3654 8428a389652a9ca4cefa1e519cdc537d 410 Pfam PF00156 Phosphoribosyl transferase domain 214 351 1.1E-21 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TREPR_3654 8428a389652a9ca4cefa1e519cdc537d 410 Gene3D G3DSA:3.40.50.2020 87 386 6.8E-73 T 13-10-2018 TREPR_3654 8428a389652a9ca4cefa1e519cdc537d 410 SUPERFAMILY SSF53271 235 397 1.19E-31 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_3654 8428a389652a9ca4cefa1e519cdc537d 410 SMART SM01400 9 191 1.3E-12 T 13-10-2018 TREPR_3654 8428a389652a9ca4cefa1e519cdc537d 410 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 83 398 1.3E-95 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TREPR_3654 8428a389652a9ca4cefa1e519cdc537d 410 SUPERFAMILY SSF53271 89 229 1.63E-27 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_3654 8428a389652a9ca4cefa1e519cdc537d 410 Gene3D G3DSA:3.40.50.2020 219 374 6.8E-73 T 13-10-2018 TREPR_3654 8428a389652a9ca4cefa1e519cdc537d 410 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 86 191 2.1E-23 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 SUPERFAMILY SSF116734 633 798 2.94E-18 T 13-10-2018 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 Gene3D G3DSA:1.20.1260.30 2 154 3.8E-15 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 Gene3D G3DSA:3.90.220.20 631 765 1.1E-14 T 13-10-2018 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 Pfam PF01420 Type I restriction modification DNA specificity domain 457 619 2.3E-26 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 Pfam PF01420 Type I restriction modification DNA specificity domain 638 779 6.3E-12 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 SUPERFAMILY SSF53335 5 641 9.81E-88 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 Pfam PF02384 N-6 DNA Methylase 132 451 2.5E-51 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 SUPERFAMILY SSF116734 457 630 3.43E-31 T 13-10-2018 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 Gene3D G3DSA:3.90.220.20 457 630 2.3E-26 T 13-10-2018 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 Gene3D G3DSA:3.40.50.150 155 456 2.6E-69 T 13-10-2018 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 152 168 3.7E-18 T 13-10-2018 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 176 190 3.7E-18 T 13-10-2018 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 262 274 3.7E-18 T 13-10-2018 TREPR_3630 9c5e81af7ddb81be916f4da542dbf3b8 809 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 290 314 3.7E-18 T 13-10-2018 TREPR_3580 1d00fe87c4e51a907dc461478ae4c11d 360 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 343 2.3E-19 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_1746 52333e3827bffb561535b60ea368e41a 498 Pfam PF11973 NQRA C-terminal domain 299 349 3.3E-7 T 13-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 TREPR_1746 52333e3827bffb561535b60ea368e41a 498 Pfam PF13183 4Fe-4S dicluster domain 377 446 1.5E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_1746 52333e3827bffb561535b60ea368e41a 498 Pfam PF13375 RnfC Barrel sandwich hybrid domain 12 112 2.7E-8 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain TREPR_1746 52333e3827bffb561535b60ea368e41a 498 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 255 7.1E-10 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_1746 52333e3827bffb561535b60ea368e41a 498 SUPERFAMILY SSF46548 375 456 3.27E-12 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_1746 52333e3827bffb561535b60ea368e41a 498 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 434 445 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1746 52333e3827bffb561535b60ea368e41a 498 SUPERFAMILY SSF142019 120 305 5.49E-11 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_1746 52333e3827bffb561535b60ea368e41a 498 Gene3D G3DSA:1.10.1060.10 369 464 8.4E-9 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_1746 52333e3827bffb561535b60ea368e41a 498 SUPERFAMILY SSF142984 297 364 2.35E-6 T 13-10-2018 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 Gene3D G3DSA:2.40.40.20 797 945 3.1E-43 T 13-10-2018 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 SUPERFAMILY SSF53706 217 825 8.38E-142 T 13-10-2018 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 Pfam PF02613 Nitrate reductase delta subunit 31 129 1.3E-10 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 SUPERFAMILY SSF50692 813 943 4.29E-34 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 208 942 7.1E-257 T 13-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 Gene3D G3DSA:3.40.50.740 208 459 1.4E-62 T 13-10-2018 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 653 670 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 Pfam PF00384 Molybdopterin oxidoreductase 265 711 1.2E-67 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 Gene3D G3DSA:3.40.228.10 484 556 6.1E-18 T 13-10-2018 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 SUPERFAMILY SSF89155 5 173 2.49E-15 T 13-10-2018 IPR036411 TorD-like superfamily TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 Pfam PF01568 Molydopterin dinucleotide binding domain 823 935 2.2E-24 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 Gene3D G3DSA:3.40.50.740 581 762 9.7E-39 T 13-10-2018 TREPR_0472 c96ef029d8d5611be73e3efd713262c8 945 Gene3D G3DSA:1.10.3480.10 3 174 1.4E-17 T 13-10-2018 TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 Gene3D G3DSA:3.30.70.20 112 168 5.0E-13 T 13-10-2018 TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 228 456 7.5E-50 T 13-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 SUPERFAMILY SSF54862 144 214 1.03E-17 T 13-10-2018 TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 Pfam PF00037 4Fe-4S binding domain 145 165 3.0E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 Pfam PF00037 4Fe-4S binding domain 190 211 4.2E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 Gene3D G3DSA:3.30.70.20 171 218 3.4E-14 T 13-10-2018 TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 Gene3D G3DSA:3.40.950.20 266 473 2.6E-30 T 13-10-2018 TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 TIGRFAM TIGR04105 FeFe_hydrog_B1: [FeFe] hydrogenase, group B1/B3 5 460 7.9E-161 T 13-10-2018 IPR027631 [FeFe] hydrogenase, group B1/B3 TREPR_0390 08d4200df76705f8834b56bd7ad64255 478 SUPERFAMILY SSF53920 195 464 7.46E-62 T 13-10-2018 IPR009016 Iron hydrogenase TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Gene3D G3DSA:3.40.50.12740 849 975 4.2E-37 T 13-10-2018 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Gene3D G3DSA:1.10.287.130 557 663 1.1E-21 T 13-10-2018 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Gene3D G3DSA:3.40.190.10 391 485 3.9E-20 T 13-10-2018 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Gene3D G3DSA:3.40.190.10 288 512 3.9E-20 T 13-10-2018 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Gene3D G3DSA:3.30.565.10 664 832 4.9E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 712 828 6.6E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 SMART SM00388 590 665 9.5E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Gene3D G3DSA:3.40.190.10 70 259 1.2E-13 T 13-10-2018 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Gene3D G3DSA:3.40.190.10 142 234 1.2E-13 T 13-10-2018 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 SUPERFAMILY SSF47384 577 666 3.34E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 SMART SM00448 850 968 2.1E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 SUPERFAMILY SSF53850 304 506 6.29E-17 T 13-10-2018 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 SUPERFAMILY SSF55874 654 826 7.47E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Pfam PF00072 Response regulator receiver domain 853 963 4.6E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 305 479 2.5E-9 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 826 9.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 PRINTS PR00344 Bacterial sensor protein C-terminal signature 772 782 9.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 PRINTS PR00344 Bacterial sensor protein C-terminal signature 754 768 9.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 PRINTS PR00344 Bacterial sensor protein C-terminal signature 789 807 9.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 SMART SM00387 712 829 2.0E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Pfam PF00512 His Kinase A (phospho-acceptor) domain 590 665 6.8E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 69 227 1.1E-9 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 SUPERFAMILY SSF53850 71 257 4.35E-17 T 13-10-2018 TREPR_2916 4615c700d0a24e63754adb52c58a3b7b 976 SUPERFAMILY SSF52172 849 972 3.13E-31 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 SUPERFAMILY SSF52313 16 235 7.19E-92 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 16 27 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 12 240 41.924 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 Pfam PF00318 Ribosomal protein S2 19 234 1.3E-95 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 13 236 1.1E-108 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 Gene3D G3DSA:3.40.50.10490 19 229 9.3E-90 T 13-10-2018 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 168 192 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 PRINTS PR00395 Ribosomal protein S2 signature 16 34 9.1E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 PRINTS PR00395 Ribosomal protein S2 signature 47 56 9.1E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 PRINTS PR00395 Ribosomal protein S2 signature 97 114 9.1E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 PRINTS PR00395 Ribosomal protein S2 signature 168 185 9.1E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 PRINTS PR00395 Ribosomal protein S2 signature 185 196 9.1E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 PRINTS PR00395 Ribosomal protein S2 signature 206 220 9.1E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2670 9f0d316cbaa01ba2d0b7eee19f2040b0 306 Gene3D G3DSA:1.10.287.610 113 160 9.3E-90 T 13-10-2018 TREPR_1351 1db3ae34efb0bf2ec41060f424091641 350 SUPERFAMILY SSF47413 24 72 7.88E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1351 1db3ae34efb0bf2ec41060f424091641 350 Pfam PF13377 Periplasmic binding protein-like domain 185 340 3.0E-31 T 13-10-2018 TREPR_1351 1db3ae34efb0bf2ec41060f424091641 350 Gene3D G3DSA:3.40.50.2300 83 322 9.2E-62 T 13-10-2018 TREPR_1351 1db3ae34efb0bf2ec41060f424091641 350 Gene3D G3DSA:1.10.260.40 24 80 3.9E-16 T 13-10-2018 TREPR_1351 1db3ae34efb0bf2ec41060f424091641 350 ProSitePatterns PS00356 LacI-type HTH domain signature. 26 44 - T 13-10-2018 TREPR_1351 1db3ae34efb0bf2ec41060f424091641 350 SUPERFAMILY SSF53822 83 343 4.21E-53 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1351 1db3ae34efb0bf2ec41060f424091641 350 SMART SM00354 23 93 7.1E-9 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_1351 1db3ae34efb0bf2ec41060f424091641 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 26 68 1.8E-14 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_1351 1db3ae34efb0bf2ec41060f424091641 350 Gene3D G3DSA:3.40.50.2300 175 302 9.2E-62 T 13-10-2018 TREPR_0291 a517afb6d5ffcb5974317beac3741a81 293 SUPERFAMILY SSF75217 133 283 3.53E-27 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases TREPR_0291 a517afb6d5ffcb5974317beac3741a81 293 Pfam PF00588 SpoU rRNA Methylase family 137 280 9.5E-26 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TREPR_0291 a517afb6d5ffcb5974317beac3741a81 293 Gene3D G3DSA:3.40.1280.10 137 291 4.4E-31 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TREPR_2959 fff3f62bbc0b90507dc4c00ff5c1b576 222 Pfam PF13545 Crp-like helix-turn-helix domain 158 219 4.5E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TREPR_2959 fff3f62bbc0b90507dc4c00ff5c1b576 222 SUPERFAMILY SSF46785 154 220 1.68E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2959 fff3f62bbc0b90507dc4c00ff5c1b576 222 SUPERFAMILY SSF51206 1 140 3.93E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like TREPR_2959 fff3f62bbc0b90507dc4c00ff5c1b576 222 SMART SM00100 13 134 3.8E-6 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_2959 fff3f62bbc0b90507dc4c00ff5c1b576 222 Gene3D G3DSA:2.60.120.1460 2 222 8.3E-55 T 13-10-2018 TREPR_2959 fff3f62bbc0b90507dc4c00ff5c1b576 222 Pfam PF00027 Cyclic nucleotide-binding domain 34 114 2.7E-10 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_1206 92f17e06de045488f02b71a70027c4dc 214 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 95 9.0E-18 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TREPR_1206 92f17e06de045488f02b71a70027c4dc 214 Pfam PF01386 Ribosomal L25p family 8 92 6.5E-21 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TREPR_1206 92f17e06de045488f02b71a70027c4dc 214 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 183 27.14 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TREPR_1206 92f17e06de045488f02b71a70027c4dc 214 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 180 9.5E-28 T 13-10-2018 IPR020057 Ribosomal protein L25, beta domain TREPR_1206 92f17e06de045488f02b71a70027c4dc 214 Gene3D G3DSA:2.40.240.10 3 95 5.3E-23 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_1206 92f17e06de045488f02b71a70027c4dc 214 SUPERFAMILY SSF50715 4 188 2.44E-50 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_1206 92f17e06de045488f02b71a70027c4dc 214 Gene3D G3DSA:2.170.120.20 99 190 5.3E-29 T 13-10-2018 IPR037121 Ribosomal protein L25, C-terminal TREPR_1206 92f17e06de045488f02b71a70027c4dc 214 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 179 2.3E-54 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TREPR_1579 bba60e060c1967767efcf50ec1a95fec 326 SUPERFAMILY SSF51261 185 323 2.77E-50 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_1579 bba60e060c1967767efcf50ec1a95fec 326 Gene3D G3DSA:2.70.70.10 185 325 5.8E-44 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_1579 bba60e060c1967767efcf50ec1a95fec 326 Pfam PF01551 Peptidase family M23 225 319 2.8E-31 T 13-10-2018 IPR016047 Peptidase M23 TREPR_3584 c19118b35b7759749022e4ec0fdf7f29 131 Pfam PF13470 PIN domain 1 106 1.1E-9 T 13-10-2018 IPR002716 PIN domain TREPR_3584 c19118b35b7759749022e4ec0fdf7f29 131 SUPERFAMILY SSF88723 2 114 8.13E-9 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_3584 c19118b35b7759749022e4ec0fdf7f29 131 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 3 108 8.7E-10 T 13-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component TREPR_3405 f45219aa314143ccb6b1ea947480bac5 824 SUPERFAMILY SSF46894 752 818 5.44E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_3405 f45219aa314143ccb6b1ea947480bac5 824 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 758 772 1.2E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3405 f45219aa314143ccb6b1ea947480bac5 824 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 772 788 1.2E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3405 f45219aa314143ccb6b1ea947480bac5 824 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 788 800 1.2E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3405 f45219aa314143ccb6b1ea947480bac5 824 Gene3D G3DSA:1.25.40.10 465 711 1.7E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3405 f45219aa314143ccb6b1ea947480bac5 824 Pfam PF00196 Bacterial regulatory proteins, luxR family 757 812 1.8E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3405 f45219aa314143ccb6b1ea947480bac5 824 Gene3D G3DSA:1.10.10.10 753 817 1.4E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3405 f45219aa314143ccb6b1ea947480bac5 824 SUPERFAMILY SSF52540 9 168 8.69E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3405 f45219aa314143ccb6b1ea947480bac5 824 SMART SM00421 755 812 1.2E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2963 f9a184bd09978a3366a6a47cfffab58c 423 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 100 1.4E-7 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TREPR_2963 f9a184bd09978a3366a6a47cfffab58c 423 SUPERFAMILY SSF51735 171 341 5.26E-18 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2963 f9a184bd09978a3366a6a47cfffab58c 423 Gene3D G3DSA:3.90.180.10 16 355 3.0E-39 T 13-10-2018 TREPR_2963 f9a184bd09978a3366a6a47cfffab58c 423 SUPERFAMILY SSF50129 4 191 5.48E-24 T 13-10-2018 IPR011032 GroES-like superfamily TREPR_2963 f9a184bd09978a3366a6a47cfffab58c 423 Pfam PF00107 Zinc-binding dehydrogenase 193 332 8.3E-11 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TREPR_2963 f9a184bd09978a3366a6a47cfffab58c 423 Gene3D G3DSA:3.40.50.720 161 322 3.0E-39 T 13-10-2018 TREPR_1873 9edb3d6e51e2308ee3deda96e09c56a9 343 Pfam PF13280 WYL domain 161 335 6.5E-38 T 13-10-2018 IPR026881 WYL domain TREPR_1873 9edb3d6e51e2308ee3deda96e09c56a9 343 ProSitePatterns PS00894 DeoR-type HTH domain signature. 15 49 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TREPR_2432 1be7296405ed22a419412a68b44c058f 516 Gene3D G3DSA:3.90.76.10 61 197 3.7E-121 T 13-10-2018 TREPR_2432 1be7296405ed22a419412a68b44c058f 516 Gene3D G3DSA:3.10.105.10 279 492 3.7E-121 T 13-10-2018 TREPR_2432 1be7296405ed22a419412a68b44c058f 516 PIRSF PIRSF002741 2 514 2.0E-104 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_2432 1be7296405ed22a419412a68b44c058f 516 Gene3D G3DSA:3.40.190.10 198 503 3.7E-121 T 13-10-2018 TREPR_2432 1be7296405ed22a419412a68b44c058f 516 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 428 3.2E-88 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_2432 1be7296405ed22a419412a68b44c058f 516 SUPERFAMILY SSF53850 32 514 7.24E-127 T 13-10-2018 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 Pfam PF00591 Glycosyl transferase family, a/b domain 77 304 2.9E-38 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 Gene3D G3DSA:3.90.1170.30 331 419 1.2E-135 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 1.4E-16 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 PIRSF PIRSF000478 1 433 2.8E-161 T 13-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 SUPERFAMILY SSF52418 69 323 1.7E-82 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 417 2.7E-165 T 13-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 SMART SM00941 345 419 4.2E-17 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 13-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 Gene3D G3DSA:1.20.970.10 1 66 3.0E-28 T 13-10-2018 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 SUPERFAMILY SSF54680 333 433 5.49E-19 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 SUPERFAMILY SSF47648 1 67 4.19E-20 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 Gene3D G3DSA:3.40.1030.10 77 330 1.2E-135 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1002 72a34a9654beb79957d3e5c51b7e329f 434 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 2.0E-23 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_1238 f20ca5dc16e9659230b09f683db3e418 94 SUPERFAMILY SSF143120 5 69 3.79E-13 T 13-10-2018 IPR036165 YefM-like superfamily TREPR_1238 f20ca5dc16e9659230b09f683db3e418 94 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 7 65 5.1E-9 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TREPR_3454 89087aee03f82f5fdf9251b63be144e0 119 SUPERFAMILY SSF81301 12 117 5.56E-28 T 13-10-2018 TREPR_3454 89087aee03f82f5fdf9251b63be144e0 119 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 7 112 20.503 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TREPR_3454 89087aee03f82f5fdf9251b63be144e0 119 Gene3D G3DSA:3.30.460.10 6 112 9.3E-29 T 13-10-2018 TREPR_3454 89087aee03f82f5fdf9251b63be144e0 119 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 15 111 1.7E-28 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TREPR_3454 89087aee03f82f5fdf9251b63be144e0 119 Pfam PF02410 Ribosomal silencing factor during starvation 14 111 1.1E-23 T 13-10-2018 TREPR_0844 54b337979ec469f7c7feaf68f15a9773 247 Gene3D G3DSA:3.10.129.10 152 244 1.4E-15 T 13-10-2018 TREPR_0844 54b337979ec469f7c7feaf68f15a9773 247 SUPERFAMILY SSF54637 4 124 5.76E-32 T 13-10-2018 IPR029069 HotDog domain superfamily TREPR_0844 54b337979ec469f7c7feaf68f15a9773 247 Pfam PF01643 Acyl-ACP thioesterase 2 222 1.0E-38 T 13-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 TREPR_0844 54b337979ec469f7c7feaf68f15a9773 247 SUPERFAMILY SSF54637 158 242 3.33E-15 T 13-10-2018 IPR029069 HotDog domain superfamily TREPR_0844 54b337979ec469f7c7feaf68f15a9773 247 Gene3D G3DSA:3.10.129.10 1 133 1.6E-36 T 13-10-2018 TREPR_1426 b637754e5f0f7e93c5607a57ef5f1998 478 Gene3D G3DSA:1.20.1600.10 38 469 1.2E-7 T 13-10-2018 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 Pfam PF03129 Anticodon binding domain 365 453 7.6E-21 T 13-10-2018 IPR004154 Anticodon-binding TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 Gene3D G3DSA:3.30.930.10 14 358 9.5E-126 T 13-10-2018 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 SUPERFAMILY SSF55681 14 367 3.25E-113 T 13-10-2018 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 11 456 48.932 T 13-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 156 332 7.5E-13 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 13 236 2.8E-85 T 13-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 190 207 3.6E-44 T 13-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 401 420 3.6E-44 T 13-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 315 327 3.6E-44 T 13-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 33 47 3.6E-44 T 13-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 158 175 3.6E-44 T 13-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 207 217 3.6E-44 T 13-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 SUPERFAMILY SSF52954 351 458 4.08E-33 T 13-10-2018 TREPR_0735 3a45a578455a0d74ed2b32a9a38ab135 462 Gene3D G3DSA:3.40.50.800 359 462 3.0E-31 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily TREPR_2180 e3de80a3326658be903ac7e8810bab4c 188 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 79 187 6.4E-9 T 13-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal TREPR_2180 e3de80a3326658be903ac7e8810bab4c 188 Gene3D G3DSA:1.10.357.10 1 188 6.2E-47 T 13-10-2018 TREPR_2180 e3de80a3326658be903ac7e8810bab4c 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.8E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_2180 e3de80a3326658be903ac7e8810bab4c 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.8E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_2180 e3de80a3326658be903ac7e8810bab4c 188 SUPERFAMILY SSF48498 83 187 5.72E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TREPR_2180 e3de80a3326658be903ac7e8810bab4c 188 SUPERFAMILY SSF46689 1 72 1.65E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_2180 e3de80a3326658be903ac7e8810bab4c 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 1.7E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1740 900488ab7fcef99decbf83882f8317dc 287 SUPERFAMILY SSF52540 14 141 1.17E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1740 900488ab7fcef99decbf83882f8317dc 287 Gene3D G3DSA:3.40.50.300 9 162 5.5E-6 T 13-10-2018 TREPR_0539 60d0726d19f59360548d6a7ca391c4c9 337 Gene3D G3DSA:1.10.3470.10 3 337 2.3E-94 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_0539 60d0726d19f59360548d6a7ca391c4c9 337 Pfam PF01032 FecCD transport family 15 334 2.0E-90 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TREPR_0539 60d0726d19f59360548d6a7ca391c4c9 337 SUPERFAMILY SSF81345 6 335 4.45E-75 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 Gene3D G3DSA:3.90.780.10 302 491 2.1E-31 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 SUPERFAMILY SSF55816 296 490 2.62E-32 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 PRINTS PR01607 Apyrase family signature 29 47 7.8E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 PRINTS PR01607 Apyrase family signature 232 252 7.8E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 PRINTS PR01607 Apyrase family signature 204 227 7.8E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 PRINTS PR01607 Apyrase family signature 179 196 7.8E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 Gene3D G3DSA:3.60.21.10 25 294 1.1E-52 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 Pfam PF00149 Calcineurin-like phosphoesterase 32 149 2.1E-6 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 Pfam PF02872 5'-nucleotidase, C-terminal domain 311 439 9.8E-25 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 ProSitePatterns PS00785 5'-nucleotidase signature 1. 31 43 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2953 a4eba82155363dc51d8efa3a19ba1247 491 SUPERFAMILY SSF56300 27 298 1.82E-53 T 13-10-2018 TREPR_1145 680569eb042952e6b61dad85eef31c86 157 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 148 1.1E-31 T 13-10-2018 IPR002178 PTS EIIA type-2 domain TREPR_1145 680569eb042952e6b61dad85eef31c86 157 SUPERFAMILY SSF55804 1 148 8.63E-34 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_1145 680569eb042952e6b61dad85eef31c86 157 Gene3D G3DSA:3.40.930.10 1 151 3.2E-41 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 Pfam PF13229 Right handed beta helix region 240 406 1.0E-7 T 13-10-2018 IPR039448 Right handed beta helix domain TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SUPERFAMILY SSF51126 345 491 6.12E-9 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SUPERFAMILY SSF51126 88 390 3.14E-14 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 211 232 2400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 237 258 320.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 264 286 7900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 183 205 420.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 291 311 200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 425 447 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 541 568 670.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 669 691 5400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 604 638 6800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 397 419 220.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 509 536 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 709 729 2200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 53 80 4200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 317 339 120.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 143 164 1600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 372 392 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 482 502 1500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 454 476 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SMART SM00710 344 366 41.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 Gene3D G3DSA:2.160.20.10 234 450 1.5E-11 T 13-10-2018 IPR012334 Pectin lyase fold TREPR_1462 1411f4201f5e8b8490c6c4ba5cba11b9 734 SUPERFAMILY SSF51126 381 708 1.16E-6 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 SUPERFAMILY SSF103190 119 198 3.45E-7 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Gene3D G3DSA:1.20.120.160 888 989 1.9E-11 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Pfam PF02743 Cache domain 42 286 5.4E-19 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 SMART SM00448 719 834 1.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 448 576 1.0E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 SMART SM00387 448 577 9.1E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Pfam PF01627 Hpt domain 899 978 4.3E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 SUPERFAMILY SSF47226 885 990 3.93E-13 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Gene3D G3DSA:1.10.287.130 320 399 3.3E-24 T 13-10-2018 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 574 4.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 555 4.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 516 4.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Gene3D G3DSA:3.30.565.10 400 580 3.4E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 SUPERFAMILY SSF47384 323 402 1.08E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 SMART SM00388 336 401 3.5E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Pfam PF00072 Response regulator receiver domain 721 832 4.7E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Gene3D G3DSA:3.40.50.12740 718 887 1.3E-36 T 13-10-2018 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Pfam PF00512 His Kinase A (phospho-acceptor) domain 336 401 1.8E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 SUPERFAMILY SSF52172 718 839 9.39E-32 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Gene3D G3DSA:3.30.450.20 75 187 5.8E-24 T 13-10-2018 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 Gene3D G3DSA:3.30.450.20 188 267 5.8E-24 T 13-10-2018 TREPR_1254 b0717ccfb92e418e6a3bcc12aa27f773 1073 SUPERFAMILY SSF55874 390 579 1.7E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3838 1fb4e035c870c4ef7ee5334275e8a69e 449 Pfam PF02347 Glycine cleavage system P-protein 3 444 5.4E-128 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 TREPR_3838 1fb4e035c870c4ef7ee5334275e8a69e 449 PIRSF PIRSF006815 2 448 7.1E-168 T 13-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 TREPR_3838 1fb4e035c870c4ef7ee5334275e8a69e 449 Gene3D G3DSA:3.90.1150.10 69 443 4.7E-151 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3838 1fb4e035c870c4ef7ee5334275e8a69e 449 SUPERFAMILY SSF53383 4 445 2.76E-115 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3838 1fb4e035c870c4ef7ee5334275e8a69e 449 Gene3D G3DSA:3.40.640.10 80 356 4.7E-151 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3838 1fb4e035c870c4ef7ee5334275e8a69e 449 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 2 447 44.323 T 13-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 TREPR_0800 36e613e61b503f4080d387ab55949720 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 25 92 1.0E-7 T 13-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 TREPR_0800 36e613e61b503f4080d387ab55949720 103 Pfam PF01371 Trp repressor protein 11 92 2.2E-18 T 13-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 TREPR_0800 36e613e61b503f4080d387ab55949720 103 SUPERFAMILY SSF48295 10 92 1.52E-18 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TREPR_0800 36e613e61b503f4080d387ab55949720 103 Gene3D G3DSA:1.10.1270.10 4 97 1.5E-20 T 13-10-2018 IPR038116 TrpR-like superfamily TREPR_1765 a30c041aee40676151c2fc2caf5cee30 290 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 27 285 1.4E-33 T 13-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal TREPR_1765 a30c041aee40676151c2fc2caf5cee30 290 SUPERFAMILY SSF55729 134 284 7.31E-44 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_1765 a30c041aee40676151c2fc2caf5cee30 290 Gene3D G3DSA:3.40.630.30 121 282 9.3E-73 T 13-10-2018 TREPR_1765 a30c041aee40676151c2fc2caf5cee30 290 Gene3D G3DSA:3.40.630.30 8 284 9.3E-73 T 13-10-2018 TREPR_1765 a30c041aee40676151c2fc2caf5cee30 290 PIRSF PIRSF018688 2 287 3.2E-76 T 13-10-2018 IPR016732 Uncharacterised conserved protein UCP018688 TREPR_1765 a30c041aee40676151c2fc2caf5cee30 290 SUPERFAMILY SSF55729 7 133 6.36E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_2225 c7ec1a608893595ab927e1cc9fdf5513 190 Gene3D G3DSA:3.30.750.24 106 187 2.5E-5 T 13-10-2018 IPR036513 STAS domain superfamily TREPR_2225 c7ec1a608893595ab927e1cc9fdf5513 190 Pfam PF01740 STAS domain 7 99 4.6E-12 T 13-10-2018 IPR002645 STAS domain TREPR_2225 c7ec1a608893595ab927e1cc9fdf5513 190 SUPERFAMILY SSF52091 1 96 1.26E-15 T 13-10-2018 IPR036513 STAS domain superfamily TREPR_2225 c7ec1a608893595ab927e1cc9fdf5513 190 Gene3D G3DSA:3.30.750.24 3 105 1.4E-17 T 13-10-2018 IPR036513 STAS domain superfamily TREPR_0142 5dfbd60ed544044a1d117da29c249649 268 SUPERFAMILY SSF102645 3 258 4.32E-32 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TREPR_0142 5dfbd60ed544044a1d117da29c249649 268 Gene3D G3DSA:3.40.50.10300 1 257 5.9E-58 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TREPR_0142 5dfbd60ed544044a1d117da29c249649 268 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 147 219 3.1E-5 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TREPR_0142 5dfbd60ed544044a1d117da29c249649 268 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 2 103 3.4E-18 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TREPR_0741 287e2a61effe2dea4c1e4b637f4fed95 95 SUPERFAMILY SSF141694 5 93 1.02E-24 T 13-10-2018 TREPR_0741 287e2a61effe2dea4c1e4b637f4fed95 95 Gene3D G3DSA:2.40.30.100 4 93 9.6E-34 T 13-10-2018 IPR037079 AF2212/PG0164-like superfamily TREPR_0741 287e2a61effe2dea4c1e4b637f4fed95 95 Pfam PF08922 Domain of unknown function (DUF1905) 8 91 8.9E-21 T 13-10-2018 IPR015018 Protein of unknown function DUF1905 TREPR_2639 3ea0769af017a2fc2a76d39ea073e40f 925 SMART SM00490 313 413 6.3E-17 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2639 3ea0769af017a2fc2a76d39ea073e40f 925 SMART SM00847 471 571 3.1E-7 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 TREPR_2639 3ea0769af017a2fc2a76d39ea073e40f 925 Pfam PF08482 ATP-dependent helicase C-terminal 790 920 1.2E-39 T 13-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal TREPR_2639 3ea0769af017a2fc2a76d39ea073e40f 925 SMART SM00487 31 222 8.1E-22 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2639 3ea0769af017a2fc2a76d39ea073e40f 925 SUPERFAMILY SSF52540 46 424 2.25E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2639 3ea0769af017a2fc2a76d39ea073e40f 925 Pfam PF00271 Helicase conserved C-terminal domain 293 412 6.6E-13 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2639 3ea0769af017a2fc2a76d39ea073e40f 925 Pfam PF00270 DEAD/DEAH box helicase 48 192 2.1E-7 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_2639 3ea0769af017a2fc2a76d39ea073e40f 925 Pfam PF04408 Helicase associated domain (HA2) 472 529 3.6E-5 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 TREPR_2639 3ea0769af017a2fc2a76d39ea073e40f 925 Gene3D G3DSA:3.40.50.300 10 215 6.5E-54 T 13-10-2018 TREPR_1299 a9d4c38edab4c272e27a4a24f92e06ff 481 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 431 1.2E-86 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_1299 a9d4c38edab4c272e27a4a24f92e06ff 481 Pfam PF07687 Peptidase dimerisation domain 190 277 4.8E-5 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain TREPR_1299 a9d4c38edab4c272e27a4a24f92e06ff 481 Pfam PF01546 Peptidase family M20/M25/M40 99 301 5.3E-8 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_1299 a9d4c38edab4c272e27a4a24f92e06ff 481 Gene3D G3DSA:3.40.630.10 348 464 1.1E-14 T 13-10-2018 TREPR_1299 a9d4c38edab4c272e27a4a24f92e06ff 481 PIRSF PIRSF037227 1 480 3.0E-197 T 13-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B TREPR_1299 a9d4c38edab4c272e27a4a24f92e06ff 481 SUPERFAMILY SSF53187 4 447 1.3E-56 T 13-10-2018 TREPR_1299 a9d4c38edab4c272e27a4a24f92e06ff 481 Gene3D G3DSA:3.40.630.10 20 314 2.3E-81 T 13-10-2018 TREPR_1299 a9d4c38edab4c272e27a4a24f92e06ff 481 SUPERFAMILY SSF55031 187 292 4.93E-19 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_1299 a9d4c38edab4c272e27a4a24f92e06ff 481 Gene3D G3DSA:3.30.70.360 183 300 2.3E-81 T 13-10-2018 TREPR_3602 bd1c266faa41f7f5b5d4f86fcc09a181 349 SUPERFAMILY SSF50129 1 178 7.0E-51 T 13-10-2018 IPR011032 GroES-like superfamily TREPR_3602 bd1c266faa41f7f5b5d4f86fcc09a181 349 Gene3D G3DSA:3.90.180.10 9 326 9.7E-85 T 13-10-2018 TREPR_3602 bd1c266faa41f7f5b5d4f86fcc09a181 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 68 82 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TREPR_3602 bd1c266faa41f7f5b5d4f86fcc09a181 349 SUPERFAMILY SSF51735 149 292 9.7E-23 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3602 bd1c266faa41f7f5b5d4f86fcc09a181 349 Pfam PF00107 Zinc-binding dehydrogenase 182 304 6.9E-12 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TREPR_3602 bd1c266faa41f7f5b5d4f86fcc09a181 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 141 7.6E-35 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TREPR_3602 bd1c266faa41f7f5b5d4f86fcc09a181 349 Gene3D G3DSA:3.40.50.720 158 292 9.7E-85 T 13-10-2018 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 919 1031 5.0E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Pfam PF01627 Hpt domain 1342 1421 8.3E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 SUPERFAMILY SSF52172 1170 1298 5.41E-33 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 SUPERFAMILY SSF63829 53 317 1.21E-11 T 13-10-2018 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Pfam PF00512 His Kinase A (phospho-acceptor) domain 807 872 4.0E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Gene3D G3DSA:1.10.287.130 779 870 1.7E-28 T 13-10-2018 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 SMART SM00448 1171 1286 2.3E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 SUPERFAMILY SSF47226 1269 1417 8.77E-16 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Pfam PF00072 Response regulator receiver domain 1173 1286 2.5E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Gene3D G3DSA:2.130.10.10 27 167 7.2E-25 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Gene3D G3DSA:2.130.10.10 168 367 1.5E-9 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 SMART SM00387 919 1034 2.2E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Pfam PF07494 Two component regulator propeller 374 395 0.016 T 13-10-2018 IPR011110 Two component regulator propeller TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 SUPERFAMILY SSF55874 861 1029 1.1E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 SMART SM00388 807 872 3.6E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Gene3D G3DSA:2.130.10.10 368 632 2.6E-26 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Gene3D G3DSA:1.20.120.160 1332 1426 1.3E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 SUPERFAMILY SSF63829 217 442 1.01E-11 T 13-10-2018 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Gene3D G3DSA:3.40.50.12740 1170 1331 3.2E-37 T 13-10-2018 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 994 1012 1.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 959 973 1.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1018 1031 1.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Gene3D G3DSA:2.60.40.10 633 748 9.5E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 Gene3D G3DSA:3.30.565.10 871 1036 1.6E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2069 0d6f2b3816bc77a2148f153e8bde0424 1516 SUPERFAMILY SSF47384 790 873 1.8E-22 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Gene3D G3DSA:3.40.50.300 207 396 1.5E-69 T 13-10-2018 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Pfam PF02151 UvrB/uvrC motif 465 497 6.9E-8 T 13-10-2018 IPR001943 UVR domain GO:0005515 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 SUPERFAMILY SSF52540 208 510 3.13E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 137 4.4E-8 T 13-10-2018 IPR004176 Clp, N-terminal TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.9E-7 T 13-10-2018 IPR004176 Clp, N-terminal TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 761 833 1.8E-20 T 13-10-2018 IPR019489 Clp ATPase, C-terminal TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Gene3D G3DSA:1.10.8.60 397 528 2.9E-40 T 13-10-2018 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 695 709 7.3E-38 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 588 606 7.3E-38 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 662 680 7.3E-38 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 633 651 7.3E-38 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 SUPERFAMILY SSF52540 533 825 5.85E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Gene3D G3DSA:3.40.50.300 537 759 1.4E-81 T 13-10-2018 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 SMART SM01086 761 850 7.8E-29 T 13-10-2018 IPR019489 Clp ATPase, C-terminal TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 SMART SM00382 584 753 5.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 SMART SM00382 247 391 4.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Pfam PF07724 AAA domain (Cdc48 subfamily) 583 754 9.1E-50 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Gene3D G3DSA:1.10.1780.10 3 143 2.3E-29 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Gene3D G3DSA:1.10.8.60 761 857 3.0E-21 T 13-10-2018 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Gene3D G3DSA:4.10.860.10 456 514 2.9E-40 T 13-10-2018 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 SUPERFAMILY SSF81923 6 139 1.02E-19 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 252 382 7.7E-14 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_1834 33781039bf6c70fe9b45c2a517ed54bc 871 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 342 354 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TREPR_2808 6263119b95c12e888695b0200681c3ea 280 Pfam PF00149 Calcineurin-like phosphoesterase 66 240 9.4E-15 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_2808 6263119b95c12e888695b0200681c3ea 280 Gene3D G3DSA:3.60.21.10 55 264 1.1E-27 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_2808 6263119b95c12e888695b0200681c3ea 280 SUPERFAMILY SSF56300 65 274 1.55E-34 T 13-10-2018 TREPR_3512 080414d457808600879fdde5a103d138 453 Pfam PF00909 Ammonium Transporter Family 36 444 6.4E-122 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 TREPR_3512 080414d457808600879fdde5a103d138 453 ProSitePatterns PS01219 Ammonium transporters signature. 183 208 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 TREPR_3512 080414d457808600879fdde5a103d138 453 TIGRFAM TIGR00836 amt: ammonium transporter 34 444 1.5E-129 T 13-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 TREPR_3512 080414d457808600879fdde5a103d138 453 SUPERFAMILY SSF111352 33 425 1.57E-113 T 13-10-2018 TREPR_3512 080414d457808600879fdde5a103d138 453 Gene3D G3DSA:1.10.3430.10 17 451 1.7E-143 T 13-10-2018 IPR029020 Ammonium/urea transporter TREPR_3832 04b23951e43949f96bbf2953e57e0c9f 450 SUPERFAMILY SSF55031 187 295 8.64E-23 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_3832 04b23951e43949f96bbf2953e57e0c9f 450 Pfam PF07687 Peptidase dimerisation domain 188 278 3.1E-7 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain TREPR_3832 04b23951e43949f96bbf2953e57e0c9f 450 PIRSF PIRSF037227 1 450 6.7E-127 T 13-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B TREPR_3832 04b23951e43949f96bbf2953e57e0c9f 450 Pfam PF01546 Peptidase family M20/M25/M40 82 355 9.8E-7 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_3832 04b23951e43949f96bbf2953e57e0c9f 450 SUPERFAMILY SSF53187 3 425 8.64E-52 T 13-10-2018 TREPR_3832 04b23951e43949f96bbf2953e57e0c9f 450 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 386 4.2E-63 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_0452 8d5adde35a4628e297a9aa0369565030 278 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 24 274 2.7E-76 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 TREPR_0452 8d5adde35a4628e297a9aa0369565030 278 PIRSF PIRSF005902 5 278 8.7E-68 T 13-10-2018 IPR001130 TatD family GO:0016788 TREPR_0452 8d5adde35a4628e297a9aa0369565030 278 Gene3D G3DSA:3.20.20.140 13 274 2.9E-75 T 13-10-2018 TREPR_0452 8d5adde35a4628e297a9aa0369565030 278 Pfam PF01026 TatD related DNase 40 273 6.5E-65 T 13-10-2018 IPR001130 TatD family GO:0016788 TREPR_0452 8d5adde35a4628e297a9aa0369565030 278 SUPERFAMILY SSF51556 21 275 1.86E-74 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_1166 7dccdb100df06e67bb1891b858fbc523 227 Pfam PF04474 Protein of unknown function (DUF554) 2 219 1.3E-73 T 13-10-2018 IPR007563 Protein of unknown function DUF554 TREPR_2378 7ef58fc5711297e1c8b81f26234d9c4c 576 SUPERFAMILY SSF51161 431 546 8.18E-35 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily TREPR_2378 7ef58fc5711297e1c8b81f26234d9c4c 576 Pfam PF00535 Glycosyl transferase family 2 34 138 8.1E-13 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_2378 7ef58fc5711297e1c8b81f26234d9c4c 576 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 486 514 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TREPR_2378 7ef58fc5711297e1c8b81f26234d9c4c 576 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 478 512 2.0E-6 T 13-10-2018 IPR001451 Hexapeptide repeat TREPR_2378 7ef58fc5711297e1c8b81f26234d9c4c 576 SUPERFAMILY SSF53448 31 212 4.59E-20 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2378 7ef58fc5711297e1c8b81f26234d9c4c 576 Gene3D G3DSA:2.160.10.10 373 574 7.0E-45 T 13-10-2018 TREPR_2378 7ef58fc5711297e1c8b81f26234d9c4c 576 Gene3D G3DSA:3.90.550.10 2 247 2.0E-23 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0348 c8757439518790f53c6aee4348abf84d 428 Pfam PF04015 Domain of unknown function (DUF362) 24 361 2.9E-27 T 13-10-2018 IPR007160 Domain of unknown function DUF362 TREPR_1814 5cde3e87019e381ab8ffb8616fccd1c5 655 Pfam PF03235 Protein of unknown function DUF262 9 203 1.5E-28 T 13-10-2018 IPR004919 Domain of unknown function DUF262 TREPR_1814 5cde3e87019e381ab8ffb8616fccd1c5 655 Pfam PF07510 Protein of unknown function (DUF1524) 523 637 2.2E-9 T 13-10-2018 IPR011089 Domain of unknown function DUF1524 TREPR_1814 5cde3e87019e381ab8ffb8616fccd1c5 655 ProDom PD062361 VC1766 YFJM PM0595 575 637 0.01 T 13-10-2018 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 Pfam PF02954 Bacterial regulatory protein, Fis family 464 495 2.4E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 Gene3D G3DSA:3.30.450.40 5 177 2.0E-42 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 SUPERFAMILY SSF46689 407 498 1.48E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 Gene3D G3DSA:1.10.8.60 365 432 1.0E-26 T 13-10-2018 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 479 499 4.3E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 462 479 4.3E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 SUPERFAMILY SSF55781 8 184 3.27E-42 T 13-10-2018 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 SMART SM00065 26 175 7.1E-20 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 Gene3D G3DSA:1.10.10.60 448 500 2.3E-12 T 13-10-2018 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 Pfam PF00158 Sigma-54 interaction domain 195 360 1.3E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 SMART SM00382 214 358 9.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 Pfam PF13185 GAF domain 26 166 1.9E-18 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 SUPERFAMILY SSF52540 195 436 3.44E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2338 3f8a6756c0474f2c225e717b52b8aedb 504 Gene3D G3DSA:3.40.50.300 180 364 2.0E-63 T 13-10-2018 TREPR_1263 22810e979addb10f79e6ef01b856246c 115 SMART SM00530 29 84 1.6E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1263 22810e979addb10f79e6ef01b856246c 115 SUPERFAMILY SSF47413 18 85 3.1E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1263 22810e979addb10f79e6ef01b856246c 115 Gene3D G3DSA:1.10.260.40 17 90 2.6E-12 T 13-10-2018 TREPR_1263 22810e979addb10f79e6ef01b856246c 115 Pfam PF13560 Helix-turn-helix domain 25 84 1.7E-9 T 13-10-2018 TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 250 6.3E-84 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 Hamap MF_01974 Methionine aminopeptidase [map]. 2 251 35.989 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 SUPERFAMILY SSF55920 1 249 2.62E-70 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 Gene3D G3DSA:3.90.230.10 1 255 6.9E-87 T 13-10-2018 TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 Pfam PF00557 Metallopeptidase family M24 12 239 2.0E-42 T 13-10-2018 IPR000994 Peptidase M24 TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 5.4E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 5.4E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 5.4E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TREPR_1219 144410eaeab0abe876fb4fdced37405d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 5.4E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 Gene3D G3DSA:3.40.50.1170 514 704 4.4E-28 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 SMART SM00870 515 834 1.7E-9 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 Gene3D G3DSA:3.40.50.40 718 844 3.0E-12 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 SUPERFAMILY SSF89095 312 439 3.01E-20 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 597 607 - T 13-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 SUPERFAMILY SSF55931 29 305 1.77E-33 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 Pfam PF00710 Asparaginase, N-terminal 516 687 1.9E-22 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 Gene3D G3DSA:1.10.10.410 451 513 1.4E-14 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 Gene3D G3DSA:1.10.150.380 312 450 2.6E-27 T 13-10-2018 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 Pfam PF02934 GatB/GatE catalytic domain 30 295 2.3E-27 T 13-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 Pfam PF02637 GatB domain 374 511 1.7E-33 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 PRINTS PR00139 Asparaginase/glutaminase family signature 516 527 1.7E-6 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 PRINTS PR00139 Asparaginase/glutaminase family signature 596 614 1.7E-6 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 SUPERFAMILY SSF53774 516 838 4.71E-36 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 TREPR_0665 920ef867d01db7c1cdb11b15fa4a2ca9 849 SMART SM00845 343 511 8.3E-43 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TREPR_3546 d52f3480e98142dfa686b31c9711625d 548 Gene3D G3DSA:3.10.105.10 286 505 1.3E-34 T 13-10-2018 TREPR_3546 d52f3480e98142dfa686b31c9711625d 548 SUPERFAMILY SSF53850 34 520 1.0E-92 T 13-10-2018 TREPR_3546 d52f3480e98142dfa686b31c9711625d 548 Gene3D G3DSA:3.40.190.10 12 284 1.3E-46 T 13-10-2018 TREPR_3546 d52f3480e98142dfa686b31c9711625d 548 PIRSF PIRSF002741 1 537 1.6E-66 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_3546 d52f3480e98142dfa686b31c9711625d 548 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 457 3.8E-71 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 Gene3D G3DSA:3.40.50.300 260 421 4.3E-51 T 13-10-2018 TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 SUPERFAMILY SSF52540 5 578 3.17E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 Pfam PF00270 DEAD/DEAH box helicase 17 163 3.5E-7 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 615 684 1.0E-9 T 13-10-2018 IPR011709 Domain of unknown function DUF1605 TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 Pfam PF00271 Helicase conserved C-terminal domain 272 402 5.3E-15 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 SMART SM00487 4 188 3.5E-27 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 SMART SM00490 306 403 8.1E-15 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 Gene3D G3DSA:1.20.120.1080 445 548 7.3E-13 T 13-10-2018 TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 Gene3D G3DSA:3.40.50.300 2 180 2.9E-72 T 13-10-2018 TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 SMART SM00847 463 555 3.5E-20 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 Pfam PF04408 Helicase associated domain (HA2) 464 550 2.7E-12 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 TREPR_2253 11842589c6e05d1f35f5e0dde9540e3e 908 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 121 130 - T 13-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site TREPR_2579 aa94fbaf2f958c4d33ce67237660e416 67 SUPERFAMILY SSF143800 1 65 5.89E-26 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2579 aa94fbaf2f958c4d33ce67237660e416 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2579 aa94fbaf2f958c4d33ce67237660e416 67 PRINTS PR01249 Ribosomal protein L31 signature 30 45 3.7E-22 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2579 aa94fbaf2f958c4d33ce67237660e416 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.7E-22 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2579 aa94fbaf2f958c4d33ce67237660e416 67 PRINTS PR01249 Ribosomal protein L31 signature 45 63 3.7E-22 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2579 aa94fbaf2f958c4d33ce67237660e416 67 Gene3D G3DSA:2.30.170.50 1 67 4.5E-32 T 13-10-2018 TREPR_2579 aa94fbaf2f958c4d33ce67237660e416 67 Pfam PF01197 Ribosomal protein L31 1 64 5.6E-32 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2579 aa94fbaf2f958c4d33ce67237660e416 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 30.056 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2579 aa94fbaf2f958c4d33ce67237660e416 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.5E-31 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 200 314 5.0E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 Gene3D G3DSA:3.30.565.10 154 318 9.3E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 78 152 1.0E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 SUPERFAMILY SSF55874 141 314 3.67E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 Gene3D G3DSA:1.10.287.130 61 153 7.6E-22 T 13-10-2018 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 SMART SM00448 338 456 2.7E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 Pfam PF00072 Response regulator receiver domain 341 452 2.4E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 SUPERFAMILY SSF47384 62 153 2.35E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 Gene3D G3DSA:3.40.50.2300 319 464 5.8E-35 T 13-10-2018 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 241 255 5.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 259 269 5.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 294 5.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 313 5.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 SMART SM00388 78 152 4.5E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 SMART SM00387 199 316 4.5E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0183 a8d38b408e95c5d04748b24aafbf6063 473 SUPERFAMILY SSF52172 334 460 5.55E-29 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 Gene3D G3DSA:1.20.120.160 1 137 1.3E-23 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 Gene3D G3DSA:3.30.565.10 314 502 2.3E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 SMART SM00387 360 503 1.1E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 SMART SM00448 659 773 4.8E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 SUPERFAMILY SSF47226 7 122 1.57E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 Pfam PF01627 Hpt domain 9 99 1.5E-12 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 SUPERFAMILY SSF55874 317 501 3.27E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 Gene3D G3DSA:2.40.50.180 526 591 3.8E-17 T 13-10-2018 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 Pfam PF00072 Response regulator receiver domain 661 773 1.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 SMART SM00073 4 102 7.6E-17 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 Gene3D G3DSA:2.30.30.40 507 628 3.8E-17 T 13-10-2018 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 SUPERFAMILY SSF50341 509 635 4.71E-15 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 502 1.8E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 SUPERFAMILY SSF52172 659 778 6.83E-30 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 Gene3D G3DSA:3.40.50.12740 657 781 1.7E-34 T 13-10-2018 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 Pfam PF01584 CheW-like domain 513 638 5.2E-8 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 1.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 1.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 500 1.6E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1655 27989c119e752d3c67e74391c63d62d3 782 SMART SM00260 495 636 7.1E-4 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_3817 8fad2664e7b87a81be67be5b8ec11d2d 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 200 1.1E-23 T 13-10-2018 TREPR_3817 8fad2664e7b87a81be67be5b8ec11d2d 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 200 5.8E-17 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_3817 8fad2664e7b87a81be67be5b8ec11d2d 230 Gene3D G3DSA:1.10.150.240 31 100 2.5E-44 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TREPR_3817 8fad2664e7b87a81be67be5b8ec11d2d 230 SUPERFAMILY SSF56784 18 225 1.26E-45 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_3817 8fad2664e7b87a81be67be5b8ec11d2d 230 Gene3D G3DSA:3.40.50.1000 20 202 2.5E-44 T 13-10-2018 IPR023214 HAD superfamily TREPR_2418 7bc0af163298b0dec5a3474c7ef7f46d 123 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 9 120 1.8E-27 T 13-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TREPR_2418 7bc0af163298b0dec5a3474c7ef7f46d 123 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 18 120 3.0E-15 T 13-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TREPR_2418 7bc0af163298b0dec5a3474c7ef7f46d 123 Gene3D G3DSA:3.30.1330.40 6 123 4.8E-34 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TREPR_2418 7bc0af163298b0dec5a3474c7ef7f46d 123 Pfam PF07736 Chorismate mutase type I 9 120 3.3E-33 T 13-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TREPR_2418 7bc0af163298b0dec5a3474c7ef7f46d 123 SUPERFAMILY SSF55298 7 122 5.73E-30 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TREPR_1653 ee4f3e4ad5bf65219b7672521beaa5ce 92 Gene3D G3DSA:3.10.50.40 2 91 7.1E-33 T 13-10-2018 TREPR_1653 ee4f3e4ad5bf65219b7672521beaa5ce 92 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 29 49 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 TREPR_1653 ee4f3e4ad5bf65219b7672521beaa5ce 92 SUPERFAMILY SSF54534 2 88 9.16E-29 T 13-10-2018 TREPR_1653 ee4f3e4ad5bf65219b7672521beaa5ce 92 Pfam PF13616 PPIC-type PPIASE domain 7 90 1.4E-23 T 13-10-2018 TREPR_1028 be1b80fc5d5932bd30d62bfb17ba6d08 221 Gene3D G3DSA:3.40.50.1000 70 220 2.5E-31 T 13-10-2018 IPR023214 HAD superfamily TREPR_1028 be1b80fc5d5932bd30d62bfb17ba6d08 221 SUPERFAMILY SSF56784 3 218 2.85E-36 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_1028 be1b80fc5d5932bd30d62bfb17ba6d08 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 190 6.3E-20 T 13-10-2018 TREPR_0219 ca6e67f809a1c855ab0a6b6d8cc4ffa1 410 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TREPR_0219 ca6e67f809a1c855ab0a6b6d8cc4ffa1 410 Gene3D G3DSA:1.10.300.10 102 178 2.1E-73 T 13-10-2018 TREPR_0219 ca6e67f809a1c855ab0a6b6d8cc4ffa1 410 SUPERFAMILY SSF52540 3 408 6.16E-136 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0219 ca6e67f809a1c855ab0a6b6d8cc4ffa1 410 SMART SM00788 4 403 2.5E-191 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TREPR_0219 ca6e67f809a1c855ab0a6b6d8cc4ffa1 410 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 406 1.0E-131 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TREPR_0219 ca6e67f809a1c855ab0a6b6d8cc4ffa1 410 Gene3D G3DSA:3.90.170.10 242 410 1.1E-58 T 13-10-2018 TREPR_0219 ca6e67f809a1c855ab0a6b6d8cc4ffa1 410 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 410 146.172 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TREPR_0219 ca6e67f809a1c855ab0a6b6d8cc4ffa1 410 Gene3D G3DSA:3.40.440.10 6 234 2.1E-73 T 13-10-2018 TREPR_0219 ca6e67f809a1c855ab0a6b6d8cc4ffa1 410 Pfam PF00709 Adenylosuccinate synthetase 5 402 9.4E-143 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TREPR_1920 1d8500ed84562d686f246d06f6720412 415 Gene3D G3DSA:1.20.1330.10 41 231 1.1E-31 T 13-10-2018 TREPR_1920 1d8500ed84562d686f246d06f6720412 415 Pfam PF07196 Flagellin hook IN motif 222 263 2.5E-5 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TREPR_1920 1d8500ed84562d686f246d06f6720412 415 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 2.3E-15 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TREPR_1920 1d8500ed84562d686f246d06f6720412 415 Pfam PF00700 Bacterial flagellin C-terminal helical region 334 405 1.1E-5 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TREPR_1920 1d8500ed84562d686f246d06f6720412 415 SUPERFAMILY SSF64518 1 415 6.93E-50 T 13-10-2018 TREPR_1920 1d8500ed84562d686f246d06f6720412 415 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 3 414 4.3E-73 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 TREPR_3510 53728bd8db522d3bdc8c15c327ea8cb8 235 Pfam PF10016 Predicted secreted protein (DUF2259) 43 234 2.2E-30 T 13-10-2018 IPR018725 Protein of unknown function DUF2259, secreted TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 8 278 1.6E-128 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 PRINTS PR00091 Nitrogenase component II signature 13 26 1.6E-36 T 13-10-2018 TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 PRINTS PR00091 Nitrogenase component II signature 35 50 1.6E-36 T 13-10-2018 TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 PRINTS PR00091 Nitrogenase component II signature 129 144 1.6E-36 T 13-10-2018 TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 PRINTS PR00091 Nitrogenase component II signature 88 102 1.6E-36 T 13-10-2018 TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 ProSitePatterns PS00692 NifH/frxC family signature 2. 130 143 - T 13-10-2018 IPR030655 NifH/chlL conserved site TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 ProSitePatterns PS00746 NifH/frxC family signature 1. 90 102 - T 13-10-2018 IPR030655 NifH/chlL conserved site TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 PIRSF PIRSF000363 6 280 3.0E-119 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 8 279 5.2E-135 T 13-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 Gene3D G3DSA:3.40.50.300 6 280 4.4E-65 T 13-10-2018 TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 Hamap MF_00533 Nitrogenase iron protein [nifH]. 7 280 52.762 T 13-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 TREPR_2890 4a8e642e788dabd219672920c21b41fa 280 SUPERFAMILY SSF52540 8 274 4.4E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1040 6a5ad1708080bd23ac2bab48a389c5b2 115 SMART SM00530 9 64 1.2E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1040 6a5ad1708080bd23ac2bab48a389c5b2 115 SUPERFAMILY SSF47413 5 68 2.44E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1040 6a5ad1708080bd23ac2bab48a389c5b2 115 Pfam PF12844 Helix-turn-helix domain 8 68 2.7E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1040 6a5ad1708080bd23ac2bab48a389c5b2 115 Gene3D G3DSA:1.10.260.40 2 95 5.9E-15 T 13-10-2018 TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 Pfam PF16921 Tex protein YqgF-like domain 332 452 7.2E-44 T 13-10-2018 IPR032639 Tex protein, YqgF-like domain TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 SUPERFAMILY SSF47781 562 625 4.45E-12 T 13-10-2018 IPR010994 RuvA domain 2-like TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 Gene3D G3DSA:3.30.420.140 330 452 8.8E-132 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 Gene3D G3DSA:2.40.50.140 628 717 2.6E-24 T 13-10-2018 TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 SUPERFAMILY SSF50249 629 716 1.42E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 SMART SM00732 331 425 6.3E-28 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 Gene3D G3DSA:1.10.3500.10 125 499 8.8E-132 T 13-10-2018 IPR023323 Tex-like domain superfamily TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 Gene3D G3DSA:1.10.150.310 500 624 3.7E-43 T 13-10-2018 TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 Pfam PF12836 Helix-hairpin-helix motif 492 555 2.6E-27 T 13-10-2018 TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 Pfam PF09371 Tex-like protein N-terminal domain 22 209 6.6E-59 T 13-10-2018 IPR018974 Tex-like protein, N-terminal TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 Pfam PF00575 S1 RNA binding domain 644 714 1.1E-17 T 13-10-2018 IPR003029 S1 domain GO:0003676 TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 SMART SM00316 643 714 4.0E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 SUPERFAMILY SSF158832 15 325 2.48E-92 T 13-10-2018 TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 Gene3D G3DSA:1.10.10.650 13 122 4.1E-32 T 13-10-2018 IPR023319 Tex-like protein, HTH domain superfamily TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 SUPERFAMILY SSF47781 471 559 2.0E-26 T 13-10-2018 IPR010994 RuvA domain 2-like TREPR_3795 5e475fabda81c8f609c937c5eb076175 840 SUPERFAMILY SSF53098 327 469 9.86E-44 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_3227 b7bef61b2e5995ca1d536213e73bbcbf 288 Gene3D G3DSA:1.10.3660.10 186 286 5.7E-26 T 13-10-2018 TREPR_3227 b7bef61b2e5995ca1d536213e73bbcbf 288 Pfam PF02153 Prephenate dehydrogenase 21 276 2.9E-52 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 TREPR_3227 b7bef61b2e5995ca1d536213e73bbcbf 288 SUPERFAMILY SSF51735 9 175 1.26E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3227 b7bef61b2e5995ca1d536213e73bbcbf 288 Gene3D G3DSA:3.40.50.720 3 185 6.5E-46 T 13-10-2018 TREPR_3227 b7bef61b2e5995ca1d536213e73bbcbf 288 SUPERFAMILY SSF48179 182 286 1.81E-23 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TREPR_0965 96c1e845dd16afb67944a626fbb659b1 230 Gene3D G3DSA:1.10.3720.10 13 222 5.2E-42 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0965 96c1e845dd16afb67944a626fbb659b1 230 SUPERFAMILY SSF161098 17 207 3.53E-36 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0965 96c1e845dd16afb67944a626fbb659b1 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 219 1.5E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0965 96c1e845dd16afb67944a626fbb659b1 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 108 2.4E-15 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 Pfam PF13361 UvrD-like helicase C-terminal domain 274 430 8.2E-29 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 SUPERFAMILY SSF52540 1 722 1.23E-147 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 Gene3D G3DSA:1.10.486.10 560 620 6.7E-41 T 13-10-2018 TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 Gene3D G3DSA:1.10.486.10 383 468 3.1E-45 T 13-10-2018 TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 Gene3D G3DSA:3.40.50.300 277 382 3.1E-45 T 13-10-2018 TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 267 1.5E-67 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 Gene3D G3DSA:3.40.50.300 621 718 6.7E-41 T 13-10-2018 TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 Gene3D G3DSA:1.10.10.160 112 186 2.1E-87 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 Pfam PF13361 UvrD-like helicase C-terminal domain 583 698 8.0E-25 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TREPR_1192 3d6bb7b7dbde5bf19027110f97290155 822 Gene3D G3DSA:3.40.50.300 12 269 2.1E-87 T 13-10-2018 TREPR_0725 4a65601d36aaaefa60fab2b0d0806b6d 159 SUPERFAMILY SSF52218 1 157 5.77E-19 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_0725 4a65601d36aaaefa60fab2b0d0806b6d 159 Gene3D G3DSA:3.40.50.360 1 159 2.6E-37 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_0725 4a65601d36aaaefa60fab2b0d0806b6d 159 Pfam PF12682 Flavodoxin 2 155 3.9E-10 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 Pfam PF00226 DnaJ domain 5 67 1.0E-28 T 13-10-2018 IPR001623 DnaJ domain TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 Gene3D G3DSA:2.60.260.20 261 363 2.1E-30 T 13-10-2018 TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 SMART SM00271 4 62 5.1E-33 T 13-10-2018 IPR001623 DnaJ domain TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 Pfam PF01556 DnaJ C terminal domain 128 339 1.4E-41 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 Gene3D G3DSA:1.10.287.110 1 119 8.6E-37 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 SUPERFAMILY SSF57938 141 218 6.02E-20 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 355 4.0E-132 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 Gene3D G3DSA:2.60.260.20 124 256 7.0E-37 T 13-10-2018 TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 Gene3D G3DSA:2.10.230.10 154 214 7.0E-37 T 13-10-2018 TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 SUPERFAMILY SSF49493 121 273 1.28E-19 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 PRINTS PR00625 DnaJ domain signature 7 25 4.2E-33 T 13-10-2018 IPR001623 DnaJ domain TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 PRINTS PR00625 DnaJ domain signature 25 40 4.2E-33 T 13-10-2018 IPR001623 DnaJ domain TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 PRINTS PR00625 DnaJ domain signature 62 81 4.2E-33 T 13-10-2018 IPR001623 DnaJ domain TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 PRINTS PR00625 DnaJ domain signature 42 62 4.2E-33 T 13-10-2018 IPR001623 DnaJ domain TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 SUPERFAMILY SSF46565 3 106 6.67E-36 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 39.83 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 13-10-2018 IPR018253 DnaJ domain, conserved site TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 Pfam PF00684 DnaJ central domain 154 214 1.8E-12 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 TREPR_0311 a1f2098fb7586d8e83b3e701425fbf03 374 SUPERFAMILY SSF49493 265 350 3.4E-24 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 13 208 33.192 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 Gene3D G3DSA:3.90.226.10 34 210 2.0E-58 T 13-10-2018 TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 127 140 - T 13-10-2018 IPR033135 ClpP, histidine active site TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 SUPERFAMILY SSF52096 37 210 5.8E-55 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 Pfam PF00574 Clp protease 37 207 3.5E-63 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 PRINTS PR00127 Clp protease catalytic subunit P signature 183 202 5.6E-29 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 PRINTS PR00127 Clp protease catalytic subunit P signature 35 50 5.6E-29 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 5.6E-29 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 PRINTS PR00127 Clp protease catalytic subunit P signature 105 122 5.6E-29 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_1951 b465edc20402fb4d265af7959d6ffb14 211 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 5.6E-29 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_3538 6a59c1dc2bb5b69963e03c678ccd9678 407 Gene3D G3DSA:3.40.50.1980 149 256 1.4E-17 T 13-10-2018 TREPR_3538 6a59c1dc2bb5b69963e03c678ccd9678 407 SUPERFAMILY SSF53807 26 312 5.56E-39 T 13-10-2018 TREPR_3538 6a59c1dc2bb5b69963e03c678ccd9678 407 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 26 309 7.3E-26 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_3538 6a59c1dc2bb5b69963e03c678ccd9678 407 Gene3D G3DSA:3.40.50.1980 17 148 6.4E-21 T 13-10-2018 TREPR_2972 6069f83dea13228ac428927ac670a667 787 Pfam PF01627 Hpt domain 11 102 4.3E-17 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_2972 6069f83dea13228ac428927ac670a667 787 SUPERFAMILY SSF55874 454 636 2.75E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2972 6069f83dea13228ac428927ac670a667 787 SUPERFAMILY SSF50341 637 768 7.46E-35 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TREPR_2972 6069f83dea13228ac428927ac670a667 787 Gene3D G3DSA:1.10.287.560 328 386 6.8E-6 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 TREPR_2972 6069f83dea13228ac428927ac670a667 787 Gene3D G3DSA:3.30.70.1110 184 265 9.2E-6 T 13-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily TREPR_2972 6069f83dea13228ac428927ac670a667 787 SUPERFAMILY SSF47384 329 374 2.08E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2972 6069f83dea13228ac428927ac670a667 787 SUPERFAMILY SSF55052 184 254 1.78E-12 T 13-10-2018 IPR035891 CheY-binding domain of CheA TREPR_2972 6069f83dea13228ac428927ac670a667 787 Pfam PF07194 P2 response regulator binding domain 188 260 6.3E-11 T 13-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 TREPR_2972 6069f83dea13228ac428927ac670a667 787 Gene3D G3DSA:2.30.30.40 638 764 7.9E-41 T 13-10-2018 TREPR_2972 6069f83dea13228ac428927ac670a667 787 Gene3D G3DSA:2.40.50.180 661 723 7.9E-41 T 13-10-2018 TREPR_2972 6069f83dea13228ac428927ac670a667 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 501 637 1.7E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2972 6069f83dea13228ac428927ac670a667 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 592 4.4E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2972 6069f83dea13228ac428927ac670a667 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 616 4.4E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2972 6069f83dea13228ac428927ac670a667 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 556 4.4E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2972 6069f83dea13228ac428927ac670a667 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 635 4.4E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2972 6069f83dea13228ac428927ac670a667 787 SMART SM00260 630 768 9.8E-43 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_2972 6069f83dea13228ac428927ac670a667 787 Gene3D G3DSA:1.20.120.160 7 145 1.9E-33 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2972 6069f83dea13228ac428927ac670a667 787 Pfam PF01584 CheW-like domain 642 769 2.4E-29 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_2972 6069f83dea13228ac428927ac670a667 787 Gene3D G3DSA:3.30.565.10 451 637 4.4E-62 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2972 6069f83dea13228ac428927ac670a667 787 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 328 452 5.1E-25 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TREPR_2972 6069f83dea13228ac428927ac670a667 787 SMART SM01231 327 452 9.9E-14 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TREPR_2972 6069f83dea13228ac428927ac670a667 787 SUPERFAMILY SSF47226 10 129 8.11E-29 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2972 6069f83dea13228ac428927ac670a667 787 SMART SM00073 9 106 1.4E-28 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_2972 6069f83dea13228ac428927ac670a667 787 SMART SM00387 497 638 2.2E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2372 48fa4119dd9e34e496ab58cab1831eb5 271 Gene3D G3DSA:3.40.50.11350 183 269 8.9E-8 T 13-10-2018 TREPR_2372 48fa4119dd9e34e496ab58cab1831eb5 271 Pfam PF01531 Glycosyl transferase family 11 73 252 2.9E-10 T 13-10-2018 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 MetaCyc: PWY-7831|MetaCyc: PWY-7833 TREPR_0426 5e6f2fa3c32b1f789647f0409907cc3b 458 SUPERFAMILY SSF51556 53 381 5.33E-101 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_0426 5e6f2fa3c32b1f789647f0409907cc3b 458 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 452 5.6E-145 T 13-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 TREPR_0426 5e6f2fa3c32b1f789647f0409907cc3b 458 Pfam PF01979 Amidohydrolase family 49 434 4.9E-26 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TREPR_0426 5e6f2fa3c32b1f789647f0409907cc3b 458 Gene3D G3DSA:2.30.40.10 2 451 1.0E-166 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_0426 5e6f2fa3c32b1f789647f0409907cc3b 458 Gene3D G3DSA:3.20.20.140 53 421 1.0E-166 T 13-10-2018 TREPR_0426 5e6f2fa3c32b1f789647f0409907cc3b 458 SUPERFAMILY SSF51338 1 452 2.6E-36 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 370 495 6.3E-47 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 SUPERFAMILY SSF52540 95 369 3.92E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 Gene3D G3DSA:1.20.150.20 371 500 2.1E-46 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 Gene3D G3DSA:2.40.30.20 2 92 2.3E-25 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 SUPERFAMILY SSF50615 9 93 3.92E-21 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 91 8.9E-10 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 SUPERFAMILY SSF47917 371 498 1.46E-43 T 13-10-2018 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 498 2.2E-227 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 363 8.8E-73 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 500 47.317 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 Gene3D G3DSA:3.40.50.300 93 370 1.1E-120 T 13-10-2018 TREPR_1234 e13bc17b0a04dd0daf059f76835fae11 500 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 354 363 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_0728 9bcbd27311ab261e932755c5bf993ebb 504 SUPERFAMILY SSF52540 263 491 5.43E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0728 9bcbd27311ab261e932755c5bf993ebb 504 SUPERFAMILY SSF52540 6 237 1.11E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0728 9bcbd27311ab261e932755c5bf993ebb 504 Pfam PF00005 ABC transporter 23 176 2.3E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0728 9bcbd27311ab261e932755c5bf993ebb 504 Gene3D G3DSA:3.40.50.300 261 500 3.6E-40 T 13-10-2018 TREPR_0728 9bcbd27311ab261e932755c5bf993ebb 504 Pfam PF00005 ABC transporter 278 432 3.0E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0728 9bcbd27311ab261e932755c5bf993ebb 504 SMART SM00382 286 481 2.3E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0728 9bcbd27311ab261e932755c5bf993ebb 504 SMART SM00382 32 224 1.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0728 9bcbd27311ab261e932755c5bf993ebb 504 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0728 9bcbd27311ab261e932755c5bf993ebb 504 Gene3D G3DSA:3.40.50.300 1 251 7.1E-51 T 13-10-2018 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 SUPERFAMILY SSF53850 73 267 4.24E-14 T 13-10-2018 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 73 217 1.0E-7 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Pfam PF00512 His Kinase A (phospho-acceptor) domain 606 671 1.7E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 SMART SM00387 718 835 4.5E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Gene3D G3DSA:3.40.50.2300 846 977 4.1E-37 T 13-10-2018 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Gene3D G3DSA:3.40.190.10 144 238 1.2E-12 T 13-10-2018 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 718 834 7.0E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Gene3D G3DSA:3.40.190.10 400 494 3.7E-24 T 13-10-2018 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 313 515 7.8E-16 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 SUPERFAMILY SSF53850 312 527 1.41E-18 T 13-10-2018 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 SMART SM00388 606 671 2.4E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Pfam PF00072 Response regulator receiver domain 858 974 8.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 SUPERFAMILY SSF55874 660 833 1.31E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 SUPERFAMILY SSF47384 593 672 5.3E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Gene3D G3DSA:1.10.287.130 570 669 2.4E-23 T 13-10-2018 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 SUPERFAMILY SSF52172 854 978 1.01E-32 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 SMART SM00062 311 536 0.0011 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Gene3D G3DSA:3.40.190.10 309 521 3.7E-24 T 13-10-2018 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 PRINTS PR00344 Bacterial sensor protein C-terminal signature 795 813 7.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 PRINTS PR00344 Bacterial sensor protein C-terminal signature 760 774 7.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 788 7.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 832 7.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Gene3D G3DSA:3.30.565.10 670 838 4.3E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 SMART SM00448 856 974 6.4E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0917 bf838f1490c50c878a72f9e89d0add01 979 Gene3D G3DSA:3.40.190.10 74 260 1.2E-12 T 13-10-2018 TREPR_1553 02dd77d46058c9a484d9a105ab315a2a 604 Gene3D G3DSA:3.10.20.30 12 104 2.6E-22 T 13-10-2018 IPR012675 Beta-grasp domain superfamily TREPR_1553 02dd77d46058c9a484d9a105ab315a2a 604 Pfam PF14574 Domain of unknown function (DUF4445) 208 601 8.7E-120 T 13-10-2018 IPR027980 Protein of unknown function DUF4445 TREPR_1553 02dd77d46058c9a484d9a105ab315a2a 604 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 19 92 5.8E-9 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TREPR_1553 02dd77d46058c9a484d9a105ab315a2a 604 Gene3D G3DSA:3.30.420.480 207 382 1.6E-49 T 13-10-2018 TREPR_1553 02dd77d46058c9a484d9a105ab315a2a 604 SUPERFAMILY SSF53067 209 531 9.36E-8 T 13-10-2018 TREPR_1553 02dd77d46058c9a484d9a105ab315a2a 604 SUPERFAMILY SSF54292 20 105 2.79E-17 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TREPR_2151 5313e903ff2aa5910ece777024d2d4fa 390 Gene3D G3DSA:3.40.50.300 218 376 2.4E-36 T 13-10-2018 TREPR_2151 5313e903ff2aa5910ece777024d2d4fa 390 SMART SM00487 25 220 8.5E-36 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2151 5313e903ff2aa5910ece777024d2d4fa 390 SUPERFAMILY SSF52540 76 363 1.82E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2151 5313e903ff2aa5910ece777024d2d4fa 390 Pfam PF00271 Helicase conserved C-terminal domain 235 343 3.9E-22 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2151 5313e903ff2aa5910ece777024d2d4fa 390 Pfam PF00270 DEAD/DEAH box helicase 31 193 1.5E-32 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_2151 5313e903ff2aa5910ece777024d2d4fa 390 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TREPR_2151 5313e903ff2aa5910ece777024d2d4fa 390 Gene3D G3DSA:3.40.50.300 2 211 2.1E-48 T 13-10-2018 TREPR_2151 5313e903ff2aa5910ece777024d2d4fa 390 SMART SM00490 262 343 3.6E-22 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 SUPERFAMILY SSF47384 464 545 1.71E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 SUPERFAMILY SSF47226 910 1006 4.32E-11 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 Pfam PF00072 Response regulator receiver domain 746 862 4.2E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 SMART SM00388 479 544 2.1E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 591 705 5.0E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 Gene3D G3DSA:1.20.120.160 905 1004 4.1E-9 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 Gene3D G3DSA:3.30.565.10 543 707 3.2E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 SMART SM00387 591 706 1.5E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 Gene3D G3DSA:1.10.287.130 443 542 3.5E-26 T 13-10-2018 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 Pfam PF00512 His Kinase A (phospho-acceptor) domain 479 544 2.0E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 Gene3D G3DSA:3.40.50.12740 743 903 1.6E-39 T 13-10-2018 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 SUPERFAMILY SSF52172 745 867 3.84E-33 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 684 5.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 703 5.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 645 5.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 SMART SM00448 744 862 8.8E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3151 3b745157aa6e94f34628b297475a2738 1010 SUPERFAMILY SSF55874 533 704 1.14E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3617 79fba4ca5b23e05377434632fb9e0c8f 258 Pfam PF00005 ABC transporter 18 167 4.3E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3617 79fba4ca5b23e05377434632fb9e0c8f 258 SMART SM00382 27 214 5.4E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3617 79fba4ca5b23e05377434632fb9e0c8f 258 Gene3D G3DSA:3.40.50.300 1 253 3.4E-60 T 13-10-2018 TREPR_3617 79fba4ca5b23e05377434632fb9e0c8f 258 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3617 79fba4ca5b23e05377434632fb9e0c8f 258 SUPERFAMILY SSF52540 3 230 2.51E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SMART SM00448 838 951 1.0E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SMART SM00448 977 1094 4.8E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Gene3D G3DSA:3.30.565.10 658 822 5.5E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 703 819 2.6E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SMART SM00388 591 656 2.6E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Pfam PF01590 GAF domain 250 392 4.4E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Pfam PF01590 GAF domain 427 569 2.2E-5 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SUPERFAMILY SSF52172 975 1101 4.7E-32 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Gene3D G3DSA:3.30.450.40 402 581 3.1E-15 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Pfam PF01814 Hemerythrin HHE cation binding domain 1136 1249 2.4E-9 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Pfam PF00512 His Kinase A (phospho-acceptor) domain 591 655 2.5E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SMART SM00387 703 820 5.3E-42 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SUPERFAMILY SSF47384 579 657 1.75E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Pfam PF00072 Response regulator receiver domain 840 951 1.7E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Pfam PF00072 Response regulator receiver domain 980 1094 2.4E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SUPERFAMILY SSF47188 1125 1252 8.24E-28 T 13-10-2018 IPR035938 Hemerythrin-like superfamily TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Gene3D G3DSA:1.10.287.130 582 657 5.3E-20 T 13-10-2018 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SUPERFAMILY SSF55781 250 392 2.84E-8 T 13-10-2018 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SUPERFAMILY SSF55781 428 571 1.42E-11 T 13-10-2018 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SUPERFAMILY SSF52172 836 956 2.7E-22 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Gene3D G3DSA:1.20.120.50 1120 1257 2.0E-32 T 13-10-2018 IPR035938 Hemerythrin-like superfamily TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Gene3D G3DSA:3.40.50.2300 963 1103 1.9E-36 T 13-10-2018 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 PRINTS PR00344 Bacterial sensor protein C-terminal signature 804 817 1.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 759 1.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 PRINTS PR00344 Bacterial sensor protein C-terminal signature 780 798 1.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 PRINTS PR00344 Bacterial sensor protein C-terminal signature 763 773 1.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SUPERFAMILY SSF55874 645 818 2.1E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SMART SM00065 424 579 0.0019 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 SMART SM00065 249 403 0.059 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Gene3D G3DSA:3.40.50.2300 837 961 2.4E-23 T 13-10-2018 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 1126 1252 2.4E-33 T 13-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 TREPR_0855 3566297b8f14b9690d2846db987a7ab9 1257 Gene3D G3DSA:3.30.450.40 245 401 1.1E-11 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 SUPERFAMILY SSF52540 79 300 4.93E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 Gene3D G3DSA:3.30.230.10 309 467 4.6E-12 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 TIGRFAM TIGR00416 sms: DNA repair protein RadA 19 452 1.4E-133 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 PRINTS PR01874 DNA repair protein radA signature 93 121 1.4E-61 T 13-10-2018 TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 PRINTS PR01874 DNA repair protein radA signature 223 251 1.4E-61 T 13-10-2018 TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 PRINTS PR01874 DNA repair protein radA signature 134 151 1.4E-61 T 13-10-2018 TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 PRINTS PR01874 DNA repair protein radA signature 184 208 1.4E-61 T 13-10-2018 TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 PRINTS PR01874 DNA repair protein radA signature 335 358 1.4E-61 T 13-10-2018 TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 PRINTS PR01874 DNA repair protein radA signature 24 48 1.4E-61 T 13-10-2018 TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 SUPERFAMILY SSF54211 267 445 2.92E-27 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 Pfam PF06745 KaiC 85 157 1.1E-10 T 13-10-2018 IPR014774 KaiC-like domain TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 SMART SM00382 101 254 9.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 Gene3D G3DSA:3.40.50.300 77 290 1.7E-37 T 13-10-2018 TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 Hamap MF_01498 DNA repair protein RadA [radA]. 35 466 40.983 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TREPR_3200 6e1ae681b255cee3a786446dcd3602f3 467 Pfam PF13541 Subunit ChlI of Mg-chelatase 349 441 2.8E-8 T 13-10-2018 TREPR_2517 7af5703b1629da81a314456397186386 349 Gene3D G3DSA:1.25.40.10 110 178 2.4E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 Pfam PF00515 Tetratricopeptide repeat 275 308 3.1E-9 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 Pfam PF00515 Tetratricopeptide repeat 241 273 1.5E-11 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 Pfam PF13432 Tetratricopeptide repeat 107 168 2.6E-9 T 13-10-2018 TREPR_2517 7af5703b1629da81a314456397186386 349 Gene3D G3DSA:1.25.40.10 17 109 4.0E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 Pfam PF13181 Tetratricopeptide repeat 309 340 0.06 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 Gene3D G3DSA:1.25.40.10 256 348 1.0E-31 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SUPERFAMILY SSF48452 31 155 4.93E-34 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 Pfam PF13414 TPR repeat 42 77 4.0E-8 T 13-10-2018 TREPR_2517 7af5703b1629da81a314456397186386 349 Pfam PF13414 TPR repeat 176 217 3.9E-13 T 13-10-2018 TREPR_2517 7af5703b1629da81a314456397186386 349 SUPERFAMILY SSF48452 117 346 9.67E-46 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 Gene3D G3DSA:1.25.40.10 179 255 6.7E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SMART SM00028 275 308 1.9E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SMART SM00028 135 168 1.4E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SMART SM00028 309 342 0.0036 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SMART SM00028 33 66 1.9E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SMART SM00028 169 202 1.5E-8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SMART SM00028 241 274 1.5E-9 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SMART SM00028 101 134 6.2E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SMART SM00028 203 236 0.53 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2517 7af5703b1629da81a314456397186386 349 SMART SM00028 67 100 3.7E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3275 1e11b73eeb8c6a6b34498ac4f1b500bb 255 SUPERFAMILY SSF52540 4 223 1.36E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3275 1e11b73eeb8c6a6b34498ac4f1b500bb 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3275 1e11b73eeb8c6a6b34498ac4f1b500bb 255 Pfam PF00005 ABC transporter 21 165 4.4E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3275 1e11b73eeb8c6a6b34498ac4f1b500bb 255 SMART SM00382 28 215 9.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3275 1e11b73eeb8c6a6b34498ac4f1b500bb 255 Gene3D G3DSA:3.40.50.300 1 249 5.3E-64 T 13-10-2018 TREPR_2411 3daf1485a360d423a60bead384883218 269 SUPERFAMILY SSF46785 217 268 2.89E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2411 3daf1485a360d423a60bead384883218 269 Pfam PF00633 Helix-hairpin-helix motif 99 127 2.8E-6 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TREPR_2411 3daf1485a360d423a60bead384883218 269 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 153 5.5E-13 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TREPR_2411 3daf1485a360d423a60bead384883218 269 SMART SM00478 38 186 7.2E-42 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TREPR_2411 3daf1485a360d423a60bead384883218 269 Gene3D G3DSA:1.10.340.30 20 132 3.6E-56 T 13-10-2018 TREPR_2411 3daf1485a360d423a60bead384883218 269 SUPERFAMILY SSF48150 5 189 3.77E-51 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TREPR_2411 3daf1485a360d423a60bead384883218 269 Gene3D G3DSA:1.10.1670.10 12 189 3.6E-56 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TREPR_2411 3daf1485a360d423a60bead384883218 269 Gene3D G3DSA:1.10.10.10 210 267 5.2E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2411 3daf1485a360d423a60bead384883218 269 ProSitePatterns PS01155 Endonuclease III family signature. 101 130 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 TREPR_1664 e0c78be56479defe86b4ee357b636c0d 691 SUPERFAMILY SSF58104 325 635 5.75E-48 T 13-10-2018 TREPR_1664 e0c78be56479defe86b4ee357b636c0d 691 Gene3D G3DSA:1.10.287.950 426 641 1.3E-43 T 13-10-2018 TREPR_1664 e0c78be56479defe86b4ee357b636c0d 691 SMART SM00283 400 647 1.6E-51 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1664 e0c78be56479defe86b4ee357b636c0d 691 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 615 7.6E-29 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1664 e0c78be56479defe86b4ee357b636c0d 691 SMART SM00304 305 357 1.7E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_1664 e0c78be56479defe86b4ee357b636c0d 691 Gene3D G3DSA:1.10.287.950 304 416 3.4E-11 T 13-10-2018 TREPR_1664 e0c78be56479defe86b4ee357b636c0d 691 Gene3D G3DSA:3.30.450.20 138 286 2.8E-17 T 13-10-2018 TREPR_1664 e0c78be56479defe86b4ee357b636c0d 691 Pfam PF02743 Cache domain 64 261 1.1E-14 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_1664 e0c78be56479defe86b4ee357b636c0d 691 SUPERFAMILY SSF103190 67 178 5.1E-5 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TREPR_3500 8a6f4b79457373962dc1e21531a9d4bb 431 ProSitePatterns PS00483 Dihydroorotase signature 2. 309 320 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_3500 8a6f4b79457373962dc1e21531a9d4bb 431 Gene3D G3DSA:2.30.40.10 8 425 2.5E-131 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_3500 8a6f4b79457373962dc1e21531a9d4bb 431 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 429 9.2E-120 T 13-10-2018 TREPR_3500 8a6f4b79457373962dc1e21531a9d4bb 431 Gene3D G3DSA:3.20.20.140 55 374 2.5E-131 T 13-10-2018 TREPR_3500 8a6f4b79457373962dc1e21531a9d4bb 431 SUPERFAMILY SSF51556 54 373 6.81E-95 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_3500 8a6f4b79457373962dc1e21531a9d4bb 431 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 428 42.355 T 13-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_3500 8a6f4b79457373962dc1e21531a9d4bb 431 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_3500 8a6f4b79457373962dc1e21531a9d4bb 431 Pfam PF01979 Amidohydrolase family 50 425 2.1E-28 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TREPR_3500 8a6f4b79457373962dc1e21531a9d4bb 431 SUPERFAMILY SSF51338 2 431 1.42E-27 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_1382 3183fa8109dd9a553f12b96956c471d8 486 SUPERFAMILY SSF56954 37 466 1.07E-52 T 13-10-2018 TREPR_1382 3183fa8109dd9a553f12b96956c471d8 486 Pfam PF02321 Outer membrane efflux protein 66 246 2.4E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TREPR_1382 3183fa8109dd9a553f12b96956c471d8 486 Pfam PF02321 Outer membrane efflux protein 269 464 1.3E-15 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TREPR_1382 3183fa8109dd9a553f12b96956c471d8 486 Gene3D G3DSA:1.20.1600.10 44 469 1.8E-54 T 13-10-2018 TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 Hamap MF_00163 Peptide deformylase [def]. 2 158 29.156 T 13-10-2018 IPR023635 Peptide deformylase TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 SUPERFAMILY SSF56420 2 156 4.32E-57 T 13-10-2018 IPR036821 Peptide deformylase superfamily TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 1 156 1.0E-52 T 13-10-2018 IPR023635 Peptide deformylase TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 PRINTS PR01576 Peptide deformylase signature 116 145 6.9E-38 T 13-10-2018 IPR023635 Peptide deformylase TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 PRINTS PR01576 Peptide deformylase signature 97 115 6.9E-38 T 13-10-2018 IPR023635 Peptide deformylase TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 PRINTS PR01576 Peptide deformylase signature 85 96 6.9E-38 T 13-10-2018 IPR023635 Peptide deformylase TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 PRINTS PR01576 Peptide deformylase signature 30 59 6.9E-38 T 13-10-2018 IPR023635 Peptide deformylase TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 Pfam PF01327 Polypeptide deformylase 2 148 7.7E-53 T 13-10-2018 IPR023635 Peptide deformylase TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 Gene3D G3DSA:3.90.45.10 1 162 2.8E-62 T 13-10-2018 IPR036821 Peptide deformylase superfamily TREPR_1178 c6150883a7dd9605f86041c73d8407e6 162 PIRSF PIRSF004749 1 162 2.5E-55 T 13-10-2018 IPR023635 Peptide deformylase TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 Gene3D G3DSA:3.30.70.1660 110 340 4.9E-98 T 13-10-2018 TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 Gene3D G3DSA:3.30.160.20 209 295 4.9E-98 T 13-10-2018 TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 Pfam PF00472 RF-1 domain 210 319 6.1E-41 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 Gene3D G3DSA:1.20.58.410 4 99 9.7E-6 T 13-10-2018 TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 SUPERFAMILY SSF75620 8 351 7.98E-133 T 13-10-2018 TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 Pfam PF03462 PCRF domain 10 202 5.6E-73 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 353 5.7E-162 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 39.888 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 SMART SM00937 62 177 1.8E-62 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 TREPR_1506 72e212f5d1f411066d493e2f80a767ab 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TREPR_3009 ae8ab0bdef81a974c046c7b435bfe90d 184 Gene3D G3DSA:1.20.120.490 58 184 9.5E-25 T 13-10-2018 IPR024042 TM1646-like domain superfamily TREPR_3009 ae8ab0bdef81a974c046c7b435bfe90d 184 SUPERFAMILY SSF158397 64 183 3.27E-20 T 13-10-2018 IPR024042 TM1646-like domain superfamily TREPR_3009 ae8ab0bdef81a974c046c7b435bfe90d 184 Pfam PF03885 Protein of unknown function (DUF327) 27 183 1.4E-23 T 13-10-2018 IPR005585 Protein of unknown function DUF327 TREPR_1310 e4f5e2259e68ca14f1653d1bec39e9b6 311 SUPERFAMILY SSF52518 3 170 4.47E-52 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_1310 e4f5e2259e68ca14f1653d1bec39e9b6 311 Pfam PF02780 Transketolase, C-terminal domain 180 301 4.0E-23 T 13-10-2018 IPR033248 Transketolase, C-terminal domain TREPR_1310 e4f5e2259e68ca14f1653d1bec39e9b6 311 Gene3D G3DSA:3.40.50.970 1 178 1.7E-58 T 13-10-2018 TREPR_1310 e4f5e2259e68ca14f1653d1bec39e9b6 311 Gene3D G3DSA:3.40.50.920 180 311 1.6E-31 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_1310 e4f5e2259e68ca14f1653d1bec39e9b6 311 SMART SM00861 4 169 1.1E-46 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TREPR_1310 e4f5e2259e68ca14f1653d1bec39e9b6 311 SUPERFAMILY SSF52922 177 310 1.7E-28 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_1310 e4f5e2259e68ca14f1653d1bec39e9b6 311 Pfam PF02779 Transketolase, pyrimidine binding domain 3 168 1.0E-33 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Gene3D G3DSA:1.25.40.10 279 322 1.6E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Gene3D G3DSA:1.25.40.10 404 449 1.0E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Gene3D G3DSA:1.25.40.10 198 278 1.3E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Gene3D G3DSA:1.25.40.10 2 125 4.3E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Gene3D G3DSA:1.25.40.10 126 197 1.2E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Pfam PF13181 Tetratricopeptide repeat 116 148 0.12 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Pfam PF13181 Tetratricopeptide repeat 51 80 3.7E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 257 290 1.1E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 48 81 0.013 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 116 149 0.64 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 359 392 1.6E-10 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 150 183 3.9E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 14 47 6.3E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 184 222 2.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 82 115 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 291 324 1.1E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 223 256 3.0E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 325 358 9.3E-8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SMART SM00028 400 433 1.2E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Pfam PF00515 Tetratricopeptide repeat 14 45 2.0E-9 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Pfam PF00515 Tetratricopeptide repeat 291 324 9.4E-9 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Pfam PF00515 Tetratricopeptide repeat 400 433 2.2E-8 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Gene3D G3DSA:1.25.40.10 323 403 4.1E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SUPERFAMILY SSF48452 10 262 4.93E-39 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 SUPERFAMILY SSF81901 199 440 6.54E-53 T 13-10-2018 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Pfam PF13414 TPR repeat 332 373 2.1E-12 T 13-10-2018 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Pfam PF13414 TPR repeat 157 194 6.2E-7 T 13-10-2018 TREPR_3648 ca6f4d90942d15592e4e3b058f80ddec 450 Pfam PF13414 TPR repeat 230 271 6.0E-11 T 13-10-2018 TREPR_0286 23af685ac996f816457ff2c6aa47fb10 164 Gene3D G3DSA:2.40.128.270 34 161 6.8E-12 T 13-10-2018 IPR038670 HslJ-like superfamily TREPR_0286 23af685ac996f816457ff2c6aa47fb10 164 Pfam PF03724 META domain 38 149 1.1E-11 T 13-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 PRINTS PR00959 Mevalonate kinase family signature 204 223 3.1E-20 T 13-10-2018 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 PRINTS PR00959 Mevalonate kinase family signature 160 182 3.1E-20 T 13-10-2018 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 PRINTS PR00959 Mevalonate kinase family signature 67 91 3.1E-20 T 13-10-2018 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 PRINTS PR00959 Mevalonate kinase family signature 397 414 3.1E-20 T 13-10-2018 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 PRINTS PR00473 Galactokinase signature 312 326 7.4E-7 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 PRINTS PR00473 Galactokinase signature 69 87 7.4E-7 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 PRINTS PR00473 Galactokinase signature 153 171 7.4E-7 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 Pfam PF00288 GHMP kinases N terminal domain 160 224 4.3E-9 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 SUPERFAMILY SSF55060 249 446 3.56E-22 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 Gene3D G3DSA:3.30.230.10 64 243 1.5E-78 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 Pfam PF10509 Galactokinase galactose-binding signature 55 100 6.5E-12 T 13-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 SUPERFAMILY SSF54211 63 245 1.37E-37 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 PIRSF PIRSF000530 53 429 3.3E-37 T 13-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 163 173 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 TREPR_0040 7331d025a4cb336eb498c9c2a4fdf027 449 Gene3D G3DSA:3.30.70.890 244 425 1.5E-78 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 4.9E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 4.9E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 4.9E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 PRINTS PR00474 Glutamate 5-kinase family signature 48 62 4.9E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 4.9E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 262 4.1E-89 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 PIRSF PIRSF000729 6 263 2.2E-89 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 Hamap MF_00456 Glutamate 5-kinase [proB]. 11 262 33.432 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 Pfam PF00696 Amino acid kinase family 12 240 2.5E-44 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 Gene3D G3DSA:3.40.1160.10 2 263 2.2E-79 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_0149 e4c95af09d4461f6a4bbc1fd76815156 263 SUPERFAMILY SSF53633 11 261 7.07E-64 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 466 622 1.9E-30 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 Gene3D G3DSA:2.40.30.10 635 752 2.5E-36 T 13-10-2018 TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 Gene3D G3DSA:3.40.50.10050 758 864 1.4E-36 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 23 961 16.796 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 381 962 3.7E-253 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 ProSitePatterns PS01176 Initiation factor 2 signature. 914 936 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 Gene3D G3DSA:2.40.30.10 865 962 1.2E-29 T 13-10-2018 TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 388 438 3.5E-17 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 SUPERFAMILY SSF50447 865 961 1.91E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 Gene3D G3DSA:3.40.50.300 460 634 8.4E-70 T 13-10-2018 TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 Pfam PF11987 Translation-initiation factor 2 749 853 1.1E-33 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 SUPERFAMILY SSF52156 740 869 9.02E-33 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 SUPERFAMILY SSF52540 449 635 5.22E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 SUPERFAMILY SSF50447 636 719 5.61E-24 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_1756 1e95ae9b9285a3816f96a91775f641ec 966 Pfam PF00009 Elongation factor Tu GTP binding domain 468 624 5.8E-33 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_0527 c633a24cefb4a2756403cc8059b02eb4 329 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 9 317 5.0E-70 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TREPR_0527 c633a24cefb4a2756403cc8059b02eb4 329 Pfam PF03186 CobD/Cbib protein 10 300 1.0E-97 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TREPR_0527 c633a24cefb4a2756403cc8059b02eb4 329 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 323 86.382 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TREPR_0983 4f20ad9a5a20c2c5b1e97e2e7db46f44 171 Gene3D G3DSA:3.30.70.1150 84 164 2.1E-27 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal TREPR_0983 4f20ad9a5a20c2c5b1e97e2e7db46f44 171 Pfam PF13710 ACT domain 13 74 2.9E-15 T 13-10-2018 TREPR_0983 4f20ad9a5a20c2c5b1e97e2e7db46f44 171 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 158 2.7E-61 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 TREPR_0983 4f20ad9a5a20c2c5b1e97e2e7db46f44 171 Gene3D G3DSA:3.30.70.260 1 79 2.3E-34 T 13-10-2018 TREPR_0983 4f20ad9a5a20c2c5b1e97e2e7db46f44 171 SUPERFAMILY SSF55021 81 162 3.27E-23 T 13-10-2018 TREPR_0983 4f20ad9a5a20c2c5b1e97e2e7db46f44 171 Pfam PF10369 Small subunit of acetolactate synthase 85 158 1.5E-25 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 TREPR_0983 4f20ad9a5a20c2c5b1e97e2e7db46f44 171 SUPERFAMILY SSF55021 3 76 1.25E-21 T 13-10-2018 TREPR_0983 4f20ad9a5a20c2c5b1e97e2e7db46f44 171 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 77 5.0E-24 T 13-10-2018 TREPR_3720 a042673a0977c30591519ba7086d658d 258 Pfam PF00005 ABC transporter 25 183 1.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3720 a042673a0977c30591519ba7086d658d 258 Gene3D G3DSA:3.40.50.300 1 258 6.0E-77 T 13-10-2018 TREPR_3720 a042673a0977c30591519ba7086d658d 258 PIRSF PIRSF039085 1 258 2.0E-111 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TREPR_3720 a042673a0977c30591519ba7086d658d 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3720 a042673a0977c30591519ba7086d658d 258 SUPERFAMILY SSF52540 3 253 5.96E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3720 a042673a0977c30591519ba7086d658d 258 SMART SM00382 34 231 1.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 ProSitePatterns PS00211 ABC transporters family signature. 117 131 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 SUPERFAMILY SSF52540 264 496 1.67E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 SMART SM00382 303 489 5.5E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 SMART SM00382 3 195 8.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 Pfam PF00005 ABC transporter 3 144 5.6E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 SUPERFAMILY SSF52540 1 208 2.25E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 Pfam PF00005 ABC transporter 294 440 1.5E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 Pfam PF12558 ATP-binding cassette cobalt transporter 208 278 1.3E-14 T 13-10-2018 IPR022216 Putative ABC cobalt transporter TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 Gene3D G3DSA:3.40.50.300 1 219 7.6E-55 T 13-10-2018 TREPR_3761 5d8a05f856d87357b7586627b7b5aa6a 566 Gene3D G3DSA:3.40.50.300 269 513 9.8E-59 T 13-10-2018 TREPR_0562 b67a91fe809f8a81d2046b25955e4534 202 SMART SM01266 7 58 1.7E-7 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 TREPR_0562 b67a91fe809f8a81d2046b25955e4534 202 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 2.0E-9 T 13-10-2018 IPR001451 Hexapeptide repeat TREPR_0562 b67a91fe809f8a81d2046b25955e4534 202 SUPERFAMILY SSF51161 4 195 1.25E-48 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily TREPR_0562 b67a91fe809f8a81d2046b25955e4534 202 Gene3D G3DSA:2.160.10.10 1 201 3.5E-57 T 13-10-2018 TREPR_0562 b67a91fe809f8a81d2046b25955e4534 202 Pfam PF12464 Maltose acetyltransferase 10 57 1.6E-8 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 TREPR_1846 aedd3c5e8a281a9d9465fbb26c750b05 277 Gene3D G3DSA:1.20.1080.10 1 261 6.0E-88 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 TREPR_1846 aedd3c5e8a281a9d9465fbb26c750b05 277 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 164 174 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site TREPR_1846 aedd3c5e8a281a9d9465fbb26c750b05 277 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 270 7.4E-71 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 TREPR_1846 aedd3c5e8a281a9d9465fbb26c750b05 277 Pfam PF01226 Formate/nitrite transporter 9 270 3.6E-77 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 TREPR_1846 aedd3c5e8a281a9d9465fbb26c750b05 277 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 79 88 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site TREPR_0900 6c4f44d0c7fbe87d33032db3ba369296 611 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 28 338 1.2E-15 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_0900 6c4f44d0c7fbe87d33032db3ba369296 611 SUPERFAMILY SSF52540 26 357 1.94E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0900 6c4f44d0c7fbe87d33032db3ba369296 611 SMART SM00382 25 352 0.002 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0900 6c4f44d0c7fbe87d33032db3ba369296 611 Gene3D G3DSA:3.40.50.300 15 358 6.6E-24 T 13-10-2018 TREPR_3572 01ce8873990f3874fb7b83b97293b2a4 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 422 9.6E-64 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3572 01ce8873990f3874fb7b83b97293b2a4 460 PIRSF PIRSF006603 2 458 4.2E-90 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3572 01ce8873990f3874fb7b83b97293b2a4 460 Pfam PF01554 MatE 255 409 5.1E-21 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3572 01ce8873990f3874fb7b83b97293b2a4 460 Pfam PF01554 MatE 26 188 1.1E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0408 97770acf371b204d9bbf21896725ea16 337 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 3 335 4.2E-112 T 13-10-2018 IPR030827 Inositol 2-dehydrogenase TREPR_0408 97770acf371b204d9bbf21896725ea16 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 3.5E-24 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TREPR_0408 97770acf371b204d9bbf21896725ea16 337 SUPERFAMILY SSF51735 2 153 1.03E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0408 97770acf371b204d9bbf21896725ea16 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 140 209 8.3E-9 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 TREPR_0408 97770acf371b204d9bbf21896725ea16 337 Gene3D G3DSA:3.30.360.10 126 322 1.0E-107 T 13-10-2018 TREPR_0408 97770acf371b204d9bbf21896725ea16 337 SUPERFAMILY SSF55347 133 309 6.54E-32 T 13-10-2018 TREPR_0408 97770acf371b204d9bbf21896725ea16 337 Gene3D G3DSA:3.40.50.720 4 310 1.0E-107 T 13-10-2018 TREPR_0720 c2493fadb236e5974d567ac8a0a9f9ea 255 Gene3D G3DSA:3.20.20.100 4 250 1.6E-28 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_0720 c2493fadb236e5974d567ac8a0a9f9ea 255 Pfam PF00248 Aldo/keto reductase family 20 169 9.4E-19 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain TREPR_0720 c2493fadb236e5974d567ac8a0a9f9ea 255 PRINTS PR00069 Aldo-keto reductase signature 95 113 5.9E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_0720 c2493fadb236e5974d567ac8a0a9f9ea 255 PRINTS PR00069 Aldo-keto reductase signature 43 67 5.9E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_0720 c2493fadb236e5974d567ac8a0a9f9ea 255 PRINTS PR00069 Aldo-keto reductase signature 128 145 5.9E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_0720 c2493fadb236e5974d567ac8a0a9f9ea 255 SUPERFAMILY SSF51430 14 246 1.44E-28 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 49 481 3.3E-86 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 Gene3D G3DSA:2.30.250.10 125 262 5.6E-138 T 13-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 355 371 1.9E-28 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 310 328 1.9E-28 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 183 200 1.9E-28 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 449 464 1.9E-28 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 114 130 1.9E-28 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 147 167 1.9E-28 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 SUPERFAMILY SSF101821 126 257 5.58E-31 T 13-10-2018 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 Gene3D G3DSA:3.40.630.10 62 472 5.6E-138 T 13-10-2018 TREPR_2816 1ea65bb91038c07926b6cad1206fc07d 485 SUPERFAMILY SSF53187 26 483 4.37E-94 T 13-10-2018 TREPR_1528 d0867154fa6aa4f75fceece58be5dd07 370 Pfam PF00005 ABC transporter 19 167 1.8E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1528 d0867154fa6aa4f75fceece58be5dd07 370 Gene3D G3DSA:3.40.50.300 4 227 4.1E-61 T 13-10-2018 TREPR_1528 d0867154fa6aa4f75fceece58be5dd07 370 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1528 d0867154fa6aa4f75fceece58be5dd07 370 SUPERFAMILY SSF52540 4 248 3.41E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1528 d0867154fa6aa4f75fceece58be5dd07 370 Gene3D G3DSA:2.40.50.140 293 346 1.1E-23 T 13-10-2018 TREPR_1528 d0867154fa6aa4f75fceece58be5dd07 370 SUPERFAMILY SSF50331 242 362 1.82E-18 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_1528 d0867154fa6aa4f75fceece58be5dd07 370 Gene3D G3DSA:2.40.50.940 228 355 1.1E-23 T 13-10-2018 TREPR_1528 d0867154fa6aa4f75fceece58be5dd07 370 SMART SM00382 28 219 2.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1487 e6cf3cd05bda6e4234a99d76e815c4f0 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.8E-55 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TREPR_1487 e6cf3cd05bda6e4234a99d76e815c4f0 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.025 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TREPR_1487 e6cf3cd05bda6e4234a99d76e815c4f0 122 SUPERFAMILY SSF50193 1 122 7.98E-53 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_1487 e6cf3cd05bda6e4234a99d76e815c4f0 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.3E-58 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 TREPR_1487 e6cf3cd05bda6e4234a99d76e815c4f0 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1487 e6cf3cd05bda6e4234a99d76e815c4f0 122 SMART SM01374 1 122 6.9E-88 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TREPR_1487 e6cf3cd05bda6e4234a99d76e815c4f0 122 Gene3D G3DSA:2.40.150.20 1 122 6.9E-55 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 Pfam PF02954 Bacterial regulatory protein, Fis family 481 521 5.2E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 SMART SM00382 238 381 6.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 Gene3D G3DSA:1.10.8.60 389 455 2.9E-27 T 13-10-2018 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 SUPERFAMILY SSF55781 18 179 2.4E-21 T 13-10-2018 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 Pfam PF00158 Sigma-54 interaction domain 219 384 6.8E-69 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 SUPERFAMILY SSF52540 218 461 6.36E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 504 524 2.9E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 487 504 2.9E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 242 255 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 SUPERFAMILY SSF46689 431 523 5.38E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 431 440 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 Gene3D G3DSA:3.40.50.300 205 388 4.1E-65 T 13-10-2018 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 SMART SM00065 40 190 5.7E-15 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 Gene3D G3DSA:1.10.10.60 456 526 1.0E-11 T 13-10-2018 TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 Gene3D G3DSA:3.30.450.40 18 191 5.7E-41 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_2893 68d2f41ccdd43495f4d70c2ae004356d 541 Pfam PF01590 GAF domain 41 178 1.0E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 SUPERFAMILY SSF82866 296 494 3.4E-37 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 SUPERFAMILY SSF82866 795 1016 1.44E-44 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 SUPERFAMILY SSF82714 182 262 3.27E-8 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 Gene3D G3DSA:3.30.70.1320 134 331 5.7E-283 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 SUPERFAMILY SSF82693 136 321 3.92E-12 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 SUPERFAMILY SSF82714 715 794 1.44E-9 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 Gene3D G3DSA:3.30.70.1430 565 661 5.7E-283 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 Gene3D G3DSA:1.20.1640.10 10 507 5.7E-283 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 SUPERFAMILY SSF82693 44 133 1.31E-22 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 Gene3D G3DSA:3.30.2090.10 178 267 5.7E-283 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 Gene3D G3DSA:3.30.2090.10 711 798 5.7E-283 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.5E-48 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 3.5E-48 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 3.5E-48 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 3.5E-48 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 3.5E-48 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 3.5E-48 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.5E-48 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 Gene3D G3DSA:1.20.1640.10 508 1013 5.7E-283 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 Gene3D G3DSA:3.30.70.1440 662 856 5.7E-283 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 Pfam PF00873 AcrB/AcrD/AcrF family 5 1013 1.6E-233 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 Gene3D G3DSA:3.30.70.1430 40 806 5.7E-283 T 13-10-2018 TREPR_2711 b43b10d1e2206d6dda4745f9c1f2a434 1036 SUPERFAMILY SSF82693 564 663 2.09E-13 T 13-10-2018 TREPR_2384 17ba99fd833084233413cc5172af855f 295 Gene3D G3DSA:3.40.50.720 3 280 8.5E-98 T 13-10-2018 TREPR_2384 17ba99fd833084233413cc5172af855f 295 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 291 5.9E-87 T 13-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 TREPR_2384 17ba99fd833084233413cc5172af855f 295 SUPERFAMILY SSF51735 2 290 1.79E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2384 17ba99fd833084233413cc5172af855f 295 Gene3D G3DSA:3.90.25.10 161 286 8.5E-98 T 13-10-2018 TREPR_2384 17ba99fd833084233413cc5172af855f 295 Pfam PF04321 RmlD substrate binding domain 2 291 1.5E-92 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 TREPR_2536 bba157d2ed49c28530c13f42cffa9536 529 SUPERFAMILY SSF53448 158 428 2.7E-14 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2536 bba157d2ed49c28530c13f42cffa9536 529 Gene3D G3DSA:3.90.550.60 2 387 1.3E-99 T 13-10-2018 TREPR_2536 bba157d2ed49c28530c13f42cffa9536 529 Pfam PF13641 Glycosyltransferase like family 2 160 368 6.4E-12 T 13-10-2018 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 770 849 1.0E-26 T 13-10-2018 IPR019489 Clp ATPase, C-terminal TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 7.7E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 682 700 7.7E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 671 7.7E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 715 729 7.7E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 SUPERFAMILY SSF52540 553 847 9.57E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 638 656 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 SUPERFAMILY SSF81923 4 156 5.69E-40 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 SUPERFAMILY SSF52540 159 552 4.01E-97 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Gene3D G3DSA:1.10.1780.10 1 148 2.2E-35 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Gene3D G3DSA:1.10.8.60 770 858 1.2E-28 T 13-10-2018 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Gene3D G3DSA:3.40.50.300 558 769 5.6E-85 T 13-10-2018 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 5.6E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Pfam PF07724 AAA domain (Cdc48 subfamily) 603 763 2.1E-54 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Gene3D G3DSA:3.40.50.300 149 342 2.5E-76 T 13-10-2018 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 67 2.9E-12 T 13-10-2018 IPR004176 Clp, N-terminal TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.2E-13 T 13-10-2018 IPR004176 Clp, N-terminal TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 Gene3D G3DSA:3.40.50.300 343 551 8.0E-72 T 13-10-2018 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 SMART SM01086 770 866 8.2E-36 T 13-10-2018 IPR019489 Clp ATPase, C-terminal TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 851 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 SMART SM00382 604 752 2.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0638 9b0ffb9a4198317f326f8890e7eb4575 872 SMART SM00382 198 343 2.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2696 4cdc9fda80a7ed3e66d5661980309e77 440 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 5 438 25.755 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TREPR_2696 4cdc9fda80a7ed3e66d5661980309e77 440 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 9 424 9.9E-115 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TREPR_2696 4cdc9fda80a7ed3e66d5661980309e77 440 Pfam PF13393 Histidyl-tRNA synthetase 12 332 1.9E-47 T 13-10-2018 TREPR_2696 4cdc9fda80a7ed3e66d5661980309e77 440 Gene3D G3DSA:3.30.930.10 2 344 2.4E-106 T 13-10-2018 TREPR_2696 4cdc9fda80a7ed3e66d5661980309e77 440 SUPERFAMILY SSF52954 350 433 5.69E-9 T 13-10-2018 TREPR_2696 4cdc9fda80a7ed3e66d5661980309e77 440 Pfam PF03129 Anticodon binding domain 351 436 6.0E-6 T 13-10-2018 IPR004154 Anticodon-binding TREPR_2696 4cdc9fda80a7ed3e66d5661980309e77 440 SUPERFAMILY SSF55681 8 340 6.17E-78 T 13-10-2018 TREPR_2696 4cdc9fda80a7ed3e66d5661980309e77 440 Gene3D G3DSA:3.40.50.800 347 438 1.7E-10 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily TREPR_2696 4cdc9fda80a7ed3e66d5661980309e77 440 PIRSF PIRSF001549 3 438 1.1E-121 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 TREPR_3501 e78c4e65aec960d526d065b79db52ba4 144 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 4 73 7.0E-15 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal TREPR_3501 e78c4e65aec960d526d065b79db52ba4 144 Gene3D G3DSA:2.30.30.20 94 144 3.6E-11 T 13-10-2018 TREPR_3501 e78c4e65aec960d526d065b79db52ba4 144 SUPERFAMILY SSF57825 95 140 9.68E-13 T 13-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily TREPR_3501 e78c4e65aec960d526d065b79db52ba4 144 SUPERFAMILY SSF54893 1 93 4.84E-28 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily TREPR_3501 e78c4e65aec960d526d065b79db52ba4 144 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 95 138 5.9E-13 T 13-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal TREPR_3501 e78c4e65aec960d526d065b79db52ba4 144 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 2 90 1.2E-25 T 13-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal TREPR_3501 e78c4e65aec960d526d065b79db52ba4 144 Gene3D G3DSA:3.30.70.140 1 93 6.4E-26 T 13-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 85 98 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 Pfam PF00140 Sigma-70 factor, region 1.2 23 55 2.9E-10 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 SUPERFAMILY SSF88659 195 293 1.35E-24 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 SUPERFAMILY SSF88659 134 209 3.36E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 Pfam PF04542 Sigma-70 region 2 61 130 1.4E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 SUPERFAMILY SSF88946 22 131 3.45E-42 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 Gene3D G3DSA:1.20.120.1810 19 54 4.3E-5 T 13-10-2018 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 255 281 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 Gene3D G3DSA:1.10.10.10 134 211 5.7E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 Pfam PF04545 Sigma-70, region 4 230 283 1.3E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 Gene3D G3DSA:1.10.601.10 55 133 1.2E-41 T 13-10-2018 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 Pfam PF04539 Sigma-70 region 3 141 216 2.3E-17 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 Gene3D G3DSA:1.10.10.10 217 295 8.5E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 57 283 1.6E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 PRINTS PR00046 Major sigma-70 factor signature 85 98 3.7E-23 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 PRINTS PR00046 Major sigma-70 factor signature 255 270 3.7E-23 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 PRINTS PR00046 Major sigma-70 factor signature 109 117 3.7E-23 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 PRINTS PR00046 Major sigma-70 factor signature 234 246 3.7E-23 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_1827 7cde7e177cbdeb9789f96db0066bb92a 295 PRINTS PR00046 Major sigma-70 factor signature 270 281 3.7E-23 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_0924 f0daef50f378c8edb8752c1365a8612b 59 Gene3D G3DSA:1.20.5.1030 1 57 1.9E-18 T 13-10-2018 IPR038379 SecE superfamily TREPR_0924 f0daef50f378c8edb8752c1365a8612b 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 12.016 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TREPR_0924 f0daef50f378c8edb8752c1365a8612b 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 59 2.8E-17 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 TREPR_0924 f0daef50f378c8edb8752c1365a8612b 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 5 56 5.5E-18 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 Gene3D G3DSA:3.30.420.40 341 597 2.7E-80 T 13-10-2018 TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 Gene3D G3DSA:3.30.420.40 102 254 7.4E-64 T 13-10-2018 TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 SUPERFAMILY SSF53067 9 267 3.69E-36 T 13-10-2018 TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 Gene3D G3DSA:3.30.420.40 438 581 2.7E-80 T 13-10-2018 TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 SUPERFAMILY SSF53067 340 597 7.41E-47 T 13-10-2018 TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 Gene3D G3DSA:3.30.420.40 10 267 7.4E-64 T 13-10-2018 TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 731 950 3.0E-56 T 13-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 340 597 1.6E-49 T 13-10-2018 IPR008275 CoA enzyme activase TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 10 228 2.4E-21 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 TREPR_2747 0c1b5726cfde5d1503473394cd351db6 1474 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 341 597 1.9E-48 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 TREPR_0375 047c410afd79ad8a07e246c076e14725 366 Gene3D G3DSA:3.40.50.620 1 219 1.7E-79 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_0375 047c410afd79ad8a07e246c076e14725 366 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 361 5.8E-110 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TREPR_0375 047c410afd79ad8a07e246c076e14725 366 Gene3D G3DSA:2.30.30.280 224 282 1.0E-16 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TREPR_0375 047c410afd79ad8a07e246c076e14725 366 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 362 39.786 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TREPR_0375 047c410afd79ad8a07e246c076e14725 366 SUPERFAMILY SSF52402 1 253 2.43E-52 T 13-10-2018 TREPR_0375 047c410afd79ad8a07e246c076e14725 366 Pfam PF03054 tRNA methyl transferase 4 361 6.7E-120 T 13-10-2018 TREPR_0375 047c410afd79ad8a07e246c076e14725 366 Gene3D G3DSA:2.40.30.10 283 365 9.5E-24 T 13-10-2018 TREPR_0054 3e6607325e6b1f1bc436e8bb8677f3f5 370 Gene3D G3DSA:3.40.50.410 181 323 2.2E-14 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_0054 3e6607325e6b1f1bc436e8bb8677f3f5 370 Pfam PF13519 von Willebrand factor type A domain 229 336 1.4E-8 T 13-10-2018 IPR002035 von Willebrand factor, type A TREPR_0054 3e6607325e6b1f1bc436e8bb8677f3f5 370 SUPERFAMILY SSF53300 225 346 7.63E-20 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_1771 ca9ae52a0d066e252aced02f91a2c405 247 SMART SM00382 42 232 1.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1771 ca9ae52a0d066e252aced02f91a2c405 247 Gene3D G3DSA:3.40.50.300 11 242 6.3E-63 T 13-10-2018 TREPR_1771 ca9ae52a0d066e252aced02f91a2c405 247 Pfam PF00005 ABC transporter 33 181 4.2E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1771 ca9ae52a0d066e252aced02f91a2c405 247 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1771 ca9ae52a0d066e252aced02f91a2c405 247 SUPERFAMILY SSF52540 13 234 2.4E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1332 1636d4ef92bebc9ef0ba301688b946ad 506 Gene3D G3DSA:3.40.190.10 193 488 1.8E-99 T 13-10-2018 TREPR_1332 1636d4ef92bebc9ef0ba301688b946ad 506 SUPERFAMILY SSF53850 38 500 8.82E-108 T 13-10-2018 TREPR_1332 1636d4ef92bebc9ef0ba301688b946ad 506 Gene3D G3DSA:3.10.105.10 268 478 1.8E-99 T 13-10-2018 TREPR_1332 1636d4ef92bebc9ef0ba301688b946ad 506 PIRSF PIRSF002741 1 505 4.4E-82 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_1332 1636d4ef92bebc9ef0ba301688b946ad 506 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 90 112 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site TREPR_1332 1636d4ef92bebc9ef0ba301688b946ad 506 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 410 6.0E-74 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_1332 1636d4ef92bebc9ef0ba301688b946ad 506 Gene3D G3DSA:3.90.76.10 63 192 1.8E-99 T 13-10-2018 TREPR_0599 1552c35aeb6f306ea6ddfa11404e875d 76 Gene3D G3DSA:2.30.31.70 1 75 1.8E-32 T 13-10-2018 TREPR_0599 1552c35aeb6f306ea6ddfa11404e875d 76 PIRSF PIRSF037246 1 72 7.0E-35 T 13-10-2018 IPR017154 Uncharacterised conserved protein UCP037246 TREPR_0599 1552c35aeb6f306ea6ddfa11404e875d 76 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 21 65 2.3E-11 T 13-10-2018 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0006355 TREPR_0466 75c377019fe9f8a85721501895a3038f 109 Gene3D G3DSA:1.20.58.280 1 104 1.9E-30 T 13-10-2018 TREPR_0466 75c377019fe9f8a85721501895a3038f 109 PIRSF PIRSF000699 1 104 2.2E-27 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 TREPR_0466 75c377019fe9f8a85721501895a3038f 109 SUPERFAMILY SSF46973 2 97 4.05E-30 T 13-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 TREPR_0466 75c377019fe9f8a85721501895a3038f 109 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 9.6E-30 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 TREPR_3312 93d9d3b032c1c1d24bf4f0003fb54cae 302 SUPERFAMILY SSF46785 1 84 8.71E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_3312 93d9d3b032c1c1d24bf4f0003fb54cae 302 SUPERFAMILY SSF53850 90 300 9.34E-33 T 13-10-2018 TREPR_3312 93d9d3b032c1c1d24bf4f0003fb54cae 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_3312 93d9d3b032c1c1d24bf4f0003fb54cae 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_3312 93d9d3b032c1c1d24bf4f0003fb54cae 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_3312 93d9d3b032c1c1d24bf4f0003fb54cae 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_3312 93d9d3b032c1c1d24bf4f0003fb54cae 302 Pfam PF03466 LysR substrate binding domain 91 300 2.1E-33 T 13-10-2018 IPR005119 LysR, substrate-binding TREPR_3312 93d9d3b032c1c1d24bf4f0003fb54cae 302 Gene3D G3DSA:3.40.190.290 91 301 1.5E-45 T 13-10-2018 TREPR_3312 93d9d3b032c1c1d24bf4f0003fb54cae 302 Gene3D G3DSA:1.10.10.10 1 83 8.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1098 5f4fa0a47f499cc0ac6c45efb52218fd 443 TIGRFAM TIGR02549 CRISPR_DxTHG: CRISPR-associated DxTHG motif protein 153 172 1.4E-6 T 13-10-2018 IPR013383 CRISPR-associated protein DxTHG, conserved site TREPR_1098 5f4fa0a47f499cc0ac6c45efb52218fd 443 SUPERFAMILY SSF160980 19 395 7.19E-5 T 13-10-2018 TREPR_1098 5f4fa0a47f499cc0ac6c45efb52218fd 443 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 6 394 8.2E-45 T 13-10-2018 IPR019016 CRISPR-associated DxTHG protein TREPR_1098 5f4fa0a47f499cc0ac6c45efb52218fd 443 TIGRFAM TIGR02221 cas_TM1812: CRISPR-associated protein, TM1812 family 5 231 3.4E-25 T 13-10-2018 IPR011742 CRISPR-associated protein, TM1812 TREPR_0716 4a4dc4b2a349050276cbb41bea7b0083 350 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 233 245 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site TREPR_0716 4a4dc4b2a349050276cbb41bea7b0083 350 Gene3D G3DSA:1.10.600.10 39 350 4.6E-63 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily TREPR_0716 4a4dc4b2a349050276cbb41bea7b0083 350 SUPERFAMILY SSF48576 46 348 3.68E-57 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily TREPR_0716 4a4dc4b2a349050276cbb41bea7b0083 350 Pfam PF00348 Polyprenyl synthetase 53 281 5.8E-46 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 TREPR_0716 4a4dc4b2a349050276cbb41bea7b0083 350 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 96 110 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 Gene3D G3DSA:3.40.50.920 503 631 3.2E-23 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 Gene3D G3DSA:3.40.50.970 319 491 1.1E-62 T 13-10-2018 TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 8 283 1.1E-113 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 SUPERFAMILY SSF52518 320 483 1.27E-54 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 SUPERFAMILY SSF52922 504 625 2.49E-20 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 Pfam PF02779 Transketolase, pyrimidine binding domain 321 483 1.9E-35 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 Pfam PF02780 Transketolase, C-terminal domain 504 615 3.2E-17 T 13-10-2018 IPR033248 Transketolase, C-terminal domain TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 SMART SM00861 321 484 6.1E-60 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 9 623 9.0E-208 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 7 628 41.684 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 SUPERFAMILY SSF52518 7 351 9.7E-70 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_1935 863ee077a06049eabf65f5f2e3a12146 641 ProSitePatterns PS00801 Transketolase signature 1. 33 52 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 Pfam PF10531 SLBB domain 384 432 1.3E-8 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 SUPERFAMILY SSF140490 466 566 2.48E-36 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 Gene3D G3DSA:3.10.20.600 372 466 1.2E-32 T 13-10-2018 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 188 359 9.5E-46 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 Pfam PF12838 4Fe-4S dicluster domain 578 629 3.6E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 578 589 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 Gene3D G3DSA:1.20.1440.230 467 567 1.7E-33 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 471 554 3.1E-31 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 SUPERFAMILY SSF142984 381 464 1.83E-24 T 13-10-2018 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 Gene3D G3DSA:3.40.50.11540 193 371 2.6E-76 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 SMART SM00928 469 514 2.7E-23 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 Gene3D G3DSA:3.40.30.10 23 131 7.2E-23 T 13-10-2018 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 SUPERFAMILY SSF142019 139 380 1.44E-86 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 Gene3D G3DSA:3.30.70.20 571 632 3.8E-13 T 13-10-2018 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 SUPERFAMILY SSF54862 570 631 1.43E-13 T 13-10-2018 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 482 493 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3301 5565be31da4c22c3208a6d18a8aeaba0 634 SUPERFAMILY SSF52833 25 125 5.93E-16 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_1684 13d104968ed0d62555efa019e5d9dc0c 636 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 213 628 1.6E-73 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TREPR_1684 13d104968ed0d62555efa019e5d9dc0c 636 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 41 160 1.1E-11 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TREPR_1684 13d104968ed0d62555efa019e5d9dc0c 636 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 230 632 1.6E-100 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TREPR_3741 f26da27b7a30787bc36a138724678b0d 282 SUPERFAMILY SSF56112 7 209 6.05E-16 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily TREPR_3741 f26da27b7a30787bc36a138724678b0d 282 Gene3D G3DSA:3.90.1200.10 93 218 7.3E-7 T 13-10-2018 TREPR_3741 f26da27b7a30787bc36a138724678b0d 282 Pfam PF01633 Choline/ethanolamine kinase 109 200 8.0E-7 T 13-10-2018 TREPR_3641 77178e52cda9b4b7543cb9209f8c2e2c 458 Pfam PF01554 MatE 32 192 6.6E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3641 77178e52cda9b4b7543cb9209f8c2e2c 458 Pfam PF01554 MatE 253 407 7.8E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3641 77178e52cda9b4b7543cb9209f8c2e2c 458 PIRSF PIRSF006603 7 454 3.0E-88 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3641 77178e52cda9b4b7543cb9209f8c2e2c 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 417 4.8E-56 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2560 e392e13bbd9a49402fba49425cd71441 152 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TREPR_2560 e392e13bbd9a49402fba49425cd71441 152 Pfam PF00460 Flagella basal body rod protein 7 34 2.0E-6 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TREPR_2560 e392e13bbd9a49402fba49425cd71441 152 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 150 8.6E-47 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 TREPR_2560 e392e13bbd9a49402fba49425cd71441 152 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 104 147 2.6E-14 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TREPR_1021 37b0b54e6797c306e0f7a077f55b23d7 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 420 1.3E-60 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1021 37b0b54e6797c306e0f7a077f55b23d7 451 Pfam PF01554 MatE 20 180 6.3E-31 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1021 37b0b54e6797c306e0f7a077f55b23d7 451 Pfam PF01554 MatE 245 407 1.4E-21 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1021 37b0b54e6797c306e0f7a077f55b23d7 451 PIRSF PIRSF006603 6 451 2.3E-83 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 SUPERFAMILY SSF52009 125 244 5.36E-26 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 126 5.8E-28 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 PIRSF PIRSF000732 1 540 5.9E-183 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 Pfam PF00391 PEP-utilising enzyme, mobile domain 154 224 1.2E-15 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 538 1.6E-102 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 SUPERFAMILY SSF51621 248 539 5.5E-100 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 538 1.6E-163 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 Gene3D G3DSA:3.20.20.60 233 540 1.1E-110 T 13-10-2018 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 Gene3D G3DSA:3.50.30.10 6 232 2.6E-64 T 13-10-2018 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 446 464 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 Gene3D G3DSA:1.10.274.10 23 146 2.6E-64 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 SUPERFAMILY SSF47831 26 143 1.83E-31 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 463 478 4.5E-18 T 13-10-2018 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 499 511 4.5E-18 T 13-10-2018 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 446 461 4.5E-18 T 13-10-2018 TREPR_2950 5ae37ca88ee038183686cdf3a785b5f4 540 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 292 311 4.5E-18 T 13-10-2018 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 SUPERFAMILY SSF54814 278 342 2.42E-15 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 Gene3D G3DSA:3.30.300.20 278 452 5.4E-37 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta TREPR_1755 062c9ff0d8527ea754157465fffede41 515 Gene3D G3DSA:2.40.50.140 135 197 1.8E-19 T 13-10-2018 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 Pfam PF13248 zinc-ribbon domain 483 508 1.1E-8 T 13-10-2018 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 Gene3D G3DSA:3.30.1480.10 1 125 1.6E-34 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 Pfam PF08529 NusA N-terminal domain 5 124 8.1E-30 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 SUPERFAMILY SSF69705 3 125 6.54E-32 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 SMART SM00316 133 199 6.9E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 SUPERFAMILY SSF47794 367 428 1.29E-5 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 SUPERFAMILY SSF50249 131 198 3.35E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1755 062c9ff0d8527ea754157465fffede41 515 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 436 27.42 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 SUPERFAMILY SSF54814 199 276 8.5E-29 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 Pfam PF00575 S1 RNA binding domain 131 191 1.0E-5 T 13-10-2018 IPR003029 S1 domain GO:0003676 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 343 1.1E-127 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 TREPR_1755 062c9ff0d8527ea754157465fffede41 515 Gene3D G3DSA:3.30.300.20 198 276 1.6E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta TREPR_1755 062c9ff0d8527ea754157465fffede41 515 Pfam PF13184 NusA-like KH domain 229 296 8.5E-29 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Gene3D G3DSA:3.10.20.310 192 279 9.3E-19 T 13-10-2018 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Gene3D G3DSA:3.10.20.310 113 188 2.6E-15 T 13-10-2018 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Gene3D G3DSA:3.10.20.310 280 363 2.4E-14 T 13-10-2018 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Pfam PF07244 Surface antigen variable number repeat 192 281 1.2E-13 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Pfam PF07244 Surface antigen variable number repeat 38 110 1.1E-5 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Pfam PF07244 Surface antigen variable number repeat 284 348 9.0E-11 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Pfam PF07244 Surface antigen variable number repeat 111 188 1.8E-12 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Pfam PF07244 Surface antigen variable number repeat 366 437 3.5E-11 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 PIRSF PIRSF006076 1 818 2.4E-140 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 37 815 1.3E-137 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Pfam PF01103 Surface antigen 470 812 6.5E-31 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Gene3D G3DSA:3.10.20.310 366 440 1.0E-19 T 13-10-2018 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Gene3D G3DSA:3.10.20.310 37 112 1.6E-6 T 13-10-2018 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Gene3D G3DSA:2.40.160.50 522 816 2.0E-7 T 13-10-2018 TREPR_2632 89e2395d31255543bbedc6afd3790b7b 836 Gene3D G3DSA:2.40.160.50 441 521 9.5E-6 T 13-10-2018 TREPR_0340 3e375fb63ff3eca73aa73a7727bd715f 629 SUPERFAMILY SSF56235 1 225 1.12E-63 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_0340 3e375fb63ff3eca73aa73a7727bd715f 629 Gene3D G3DSA:3.60.20.10 2 187 2.3E-62 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_0340 3e375fb63ff3eca73aa73a7727bd715f 629 PIRSF PIRSF001589 1 629 1.9E-159 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TREPR_0340 3e375fb63ff3eca73aa73a7727bd715f 629 SUPERFAMILY SSF52402 235 620 5.18E-76 T 13-10-2018 TREPR_0340 3e375fb63ff3eca73aa73a7727bd715f 629 Pfam PF13537 Glutamine amidotransferase domain 50 167 1.1E-43 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TREPR_0340 3e375fb63ff3eca73aa73a7727bd715f 629 Pfam PF00733 Asparagine synthase 247 625 2.2E-92 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TREPR_0340 3e375fb63ff3eca73aa73a7727bd715f 629 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 560 1.6E-145 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TREPR_3603 dca38cf89ea3fefe7d1e3cbc2634dbc0 459 Gene3D G3DSA:3.40.50.300 8 45 2.2E-5 T 13-10-2018 TREPR_3603 dca38cf89ea3fefe7d1e3cbc2634dbc0 459 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 6 441 38.341 T 13-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 TREPR_3603 dca38cf89ea3fefe7d1e3cbc2634dbc0 459 Gene3D G3DSA:3.40.50.880 257 453 6.8E-11 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_3603 dca38cf89ea3fefe7d1e3cbc2634dbc0 459 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 450 1.4E-108 T 13-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 TREPR_3603 dca38cf89ea3fefe7d1e3cbc2634dbc0 459 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 250 441 1.1E-37 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TREPR_3603 dca38cf89ea3fefe7d1e3cbc2634dbc0 459 SUPERFAMILY SSF52540 8 198 3.08E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3603 dca38cf89ea3fefe7d1e3cbc2634dbc0 459 Gene3D G3DSA:3.40.50.300 48 188 1.2E-10 T 13-10-2018 TREPR_3603 dca38cf89ea3fefe7d1e3cbc2634dbc0 459 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 193 7.4E-11 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_3603 dca38cf89ea3fefe7d1e3cbc2634dbc0 459 SUPERFAMILY SSF52317 252 443 3.44E-30 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_2102 eec049f2593892fbf1980666abc889fa 173 Pfam PF00877 NlpC/P60 family 35 125 5.6E-5 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain TREPR_2102 eec049f2593892fbf1980666abc889fa 173 SUPERFAMILY SSF54001 22 132 1.01E-9 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_2102 eec049f2593892fbf1980666abc889fa 173 Gene3D G3DSA:3.90.1720.10 20 144 1.4E-10 T 13-10-2018 TREPR_2315 cd5102283558e64cecbf69eec5c7c1bf 257 SUPERFAMILY SSF54913 23 112 2.86E-6 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TREPR_2315 cd5102283558e64cecbf69eec5c7c1bf 257 Gene3D G3DSA:3.30.70.120 156 253 9.3E-10 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TREPR_2315 cd5102283558e64cecbf69eec5c7c1bf 257 SUPERFAMILY SSF54913 159 254 1.37E-10 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TREPR_3517 9ae72aacb64c0c99d399a35319f2e451 56 Pfam PF05534 HicB family 1 50 1.3E-18 T 13-10-2018 IPR008651 Uncharacterised protein family HicB TREPR_3517 9ae72aacb64c0c99d399a35319f2e451 56 SUPERFAMILY SSF47598 16 54 1.91E-6 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 SUPERFAMILY SSF52440 5 129 5.32E-43 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Gene3D G3DSA:3.40.50.1380 954 1089 4.4E-37 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 130 331 7.5E-76 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 685 879 8.0E-29 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 553 3.3E-36 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 50 60 1.2E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.2E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.2E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 21 35 1.2E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.2E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.2E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 170 182 1.2E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 SMART SM00851 971 1060 3.0E-20 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 SUPERFAMILY SSF52440 570 687 8.06E-44 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Gene3D G3DSA:3.30.470.20 122 400 1.8E-119 T 13-10-2018 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 850 857 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 SUPERFAMILY SSF56059 685 949 6.23E-81 T 13-10-2018 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 SUPERFAMILY SSF48108 394 555 8.76E-42 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 SUPERFAMILY SSF56059 130 399 3.7E-96 T 13-10-2018 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Gene3D G3DSA:3.30.1490.20 698 767 1.6E-98 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Pfam PF02142 MGS-like domain 972 1059 9.9E-21 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Gene3D G3DSA:1.10.1030.10 410 557 2.1E-45 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 SUPERFAMILY SSF52335 956 1088 3.27E-28 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 6 1071 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 721 735 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Gene3D G3DSA:3.30.470.20 679 946 1.6E-98 T 13-10-2018 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 SMART SM01096 421 553 1.5E-53 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Gene3D G3DSA:3.40.50.20 567 674 2.1E-42 T 13-10-2018 TREPR_1775 197e6780d5c5ab1333e86a7a67c35e69 1089 Gene3D G3DSA:3.40.50.20 4 118 3.5E-49 T 13-10-2018 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 Gene3D G3DSA:3.40.50.300 212 343 1.1E-42 T 13-10-2018 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 SMART SM00956 419 525 3.4E-41 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 SUPERFAMILY SSF52540 68 350 1.07E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 SMART SM00487 24 221 1.9E-31 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 18 472 1.1E-147 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 SUPERFAMILY SSF47819 571 646 2.83E-22 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 SUPERFAMILY SSF46785 411 527 8.57E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 Pfam PF09382 RQC domain 415 527 9.2E-32 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 Gene3D G3DSA:1.10.10.10 345 534 3.7E-42 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 Pfam PF00270 DEAD/DEAH box helicase 30 193 5.6E-22 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 Gene3D G3DSA:1.10.150.80 565 649 5.5E-22 T 13-10-2018 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 16 643 8.0E-219 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 Gene3D G3DSA:3.40.50.300 4 211 1.5E-76 T 13-10-2018 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 SMART SM00490 253 334 2.9E-26 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 Pfam PF16124 RecQ zinc-binding 346 411 1.1E-12 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 Pfam PF00570 HRDC domain 574 640 3.9E-18 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 Pfam PF00271 Helicase conserved C-terminal domain 226 333 3.5E-20 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1620 25e31e3276fa2466721f156bccbf2e80 650 SMART SM00341 570 650 1.4E-17 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TREPR_0006 c2a1b85896998191b4d8cc8da59e7878 396 Gene3D G3DSA:3.90.25.40 201 311 8.2E-137 T 13-10-2018 TREPR_0006 c2a1b85896998191b4d8cc8da59e7878 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 299 2.2E-39 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain TREPR_0006 c2a1b85896998191b4d8cc8da59e7878 396 Gene3D G3DSA:3.40.50.720 9 369 8.2E-137 T 13-10-2018 TREPR_0006 c2a1b85896998191b4d8cc8da59e7878 396 SUPERFAMILY SSF51735 34 288 3.49E-24 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1573 37d3657bc0f51ec6131cae0090c4c859 385 SUPERFAMILY SSF103473 3 379 8.28E-39 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_1573 37d3657bc0f51ec6131cae0090c4c859 385 Gene3D G3DSA:1.20.1250.20 192 382 1.5E-33 T 13-10-2018 TREPR_1573 37d3657bc0f51ec6131cae0090c4c859 385 Gene3D G3DSA:1.20.1250.20 2 177 6.1E-15 T 13-10-2018 TREPR_1573 37d3657bc0f51ec6131cae0090c4c859 385 Pfam PF12832 MFS_1 like family 5 356 8.4E-32 T 13-10-2018 IPR024989 Major facilitator superfamily associated domain TREPR_3842 08df281d60e90202f4747f92753a1d3d 758 Gene3D G3DSA:1.25.40.10 544 624 3.3E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3842 08df281d60e90202f4747f92753a1d3d 758 SUPERFAMILY SSF48452 558 620 7.17E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3842 08df281d60e90202f4747f92753a1d3d 758 Pfam PF17128 Domain of unknown function (DUF5107) 74 375 4.3E-38 T 13-10-2018 IPR033396 Domain of unknown function DUF5107 TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 Gene3D G3DSA:3.30.70.920 60 153 2.2E-20 T 13-10-2018 TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 7.6E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 7.6E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 7.6E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 Pfam PF01037 Lrp/AsnC ligand binding domain 75 146 1.3E-12 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 SUPERFAMILY SSF46785 9 66 2.15E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 SUPERFAMILY SSF54909 70 152 8.85E-15 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 SMART SM00344 9 117 2.7E-33 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 55 5.1E-16 T 13-10-2018 TREPR_3566 084667256ba4d064ec80e6a841c09d62 157 Gene3D G3DSA:1.10.10.10 2 59 8.7E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 Hamap MF_00203 UvrABC system protein C [uvrC]. 9 626 26.456 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 14 322 1.9E-95 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 Gene3D G3DSA:1.10.150.20 569 626 1.7E-10 T 13-10-2018 TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 SUPERFAMILY SSF46600 193 240 1.01E-8 T 13-10-2018 IPR036876 UVR domain superfamily TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 SUPERFAMILY SSF47781 518 625 7.63E-16 T 13-10-2018 IPR010994 RuvA domain 2-like TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 SMART SM00465 22 102 1.8E-18 T 13-10-2018 IPR000305 GIY-YIG endonuclease TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 412 560 1.6E-48 T 13-10-2018 IPR001162 UvrC family homology region TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 Pfam PF02151 UvrB/uvrC motif 206 239 1.1E-5 T 13-10-2018 IPR001943 UVR domain GO:0005515 TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 Pfam PF01541 GIY-YIG catalytic domain 23 97 3.4E-10 T 13-10-2018 IPR000305 GIY-YIG endonuclease TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 Pfam PF14520 Helix-hairpin-helix domain 576 623 4.8E-8 T 13-10-2018 TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 Gene3D G3DSA:3.40.1440.10 9 106 1.4E-31 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 Gene3D G3DSA:3.30.420.340 405 568 2.3E-51 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily TREPR_1101 8730b766c9dce9bd8533d45dd65512b1 681 SUPERFAMILY SSF82771 23 104 7.45E-20 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 Gene3D G3DSA:3.30.930.10 19 507 5.6E-227 T 13-10-2018 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 Gene3D G3DSA:3.90.960.10 257 431 5.6E-227 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 Gene3D G3DSA:3.40.50.800 12 596 5.6E-227 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 SUPERFAMILY SSF55681 18 520 1.41E-92 T 13-10-2018 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 9 305 8.6E-116 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 PRINTS PR01046 Prolyl-tRNA synthetase signature 112 123 2.7E-13 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 PRINTS PR01046 Prolyl-tRNA synthetase signature 152 163 2.7E-13 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 PRINTS PR01046 Prolyl-tRNA synthetase signature 142 150 2.7E-13 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 PRINTS PR01046 Prolyl-tRNA synthetase signature 76 94 2.7E-13 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 103 500 3.7E-46 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 Hamap MF_01569 Proline--tRNA ligase [proS]. 9 613 38.564 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 SUPERFAMILY SSF55826 264 441 5.76E-21 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 Pfam PF03129 Anticodon binding domain 517 610 3.8E-19 T 13-10-2018 IPR004154 Anticodon-binding TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 Pfam PF04073 Aminoacyl-tRNA editing domain 274 414 3.8E-21 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TREPR_0663 a2ff4cbe427344a1c17c72cdefd448de 621 SUPERFAMILY SSF52954 506 612 2.27E-27 T 13-10-2018 TREPR_0446 17bcd69172758ab38b6ccea1768a7c19 536 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 218 233 - T 13-10-2018 IPR019826 Carboxylesterase type B, active site TREPR_0446 17bcd69172758ab38b6ccea1768a7c19 536 Gene3D G3DSA:3.40.50.1820 34 532 2.1E-115 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_0446 17bcd69172758ab38b6ccea1768a7c19 536 SUPERFAMILY SSF53474 40 514 2.41E-80 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_0446 17bcd69172758ab38b6ccea1768a7c19 536 Pfam PF00135 Carboxylesterase family 40 506 3.1E-75 T 13-10-2018 IPR002018 Carboxylesterase, type B TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Pfam PF00809 Pterin binding enzyme 359 596 2.4E-40 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Gene3D G3DSA:3.40.50.280 750 900 3.3E-51 T 13-10-2018 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Gene3D G3DSA:3.20.20.20 339 640 2.0E-104 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 SUPERFAMILY SSF51717 356 628 1.96E-69 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Pfam PF02607 B12 binding domain 659 733 2.6E-21 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 SUPERFAMILY SSF56507 907 1241 8.11E-85 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 SUPERFAMILY SSF47644 653 739 5.23E-25 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 SUPERFAMILY SSF82282 6 397 4.32E-100 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Gene3D G3DSA:3.10.196.10 964 1053 1.2E-10 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Gene3D G3DSA:3.10.196.10 1090 1243 1.1E-52 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 PIRSF PIRSF000381 1 1217 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Pfam PF02310 B12 binding domain 753 848 1.8E-19 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Gene3D G3DSA:1.10.1240.10 649 737 6.6E-34 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 SMART SM01018 657 740 6.9E-37 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 941 1230 5.0E-94 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Pfam PF02574 Homocysteine S-methyltransferase 16 321 3.9E-73 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 TIGRFAM TIGR02082 metH: methionine synthase 12 1051 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 SUPERFAMILY SSF52242 749 899 2.62E-42 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_0120 aa3147fe5702ffbb3aa0b6e0e627be71 1243 Gene3D G3DSA:3.20.20.330 1 336 4.0E-118 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 TREPR_2397 39376ee03fe4f0537a47da6a7c5114dc 210 Pfam PF13580 SIS domain 15 93 6.2E-9 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TREPR_2397 39376ee03fe4f0537a47da6a7c5114dc 210 Pfam PF13580 SIS domain 95 165 1.5E-8 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TREPR_2397 39376ee03fe4f0537a47da6a7c5114dc 210 Gene3D G3DSA:3.40.50.10490 2 210 1.1E-59 T 13-10-2018 TREPR_2397 39376ee03fe4f0537a47da6a7c5114dc 210 SUPERFAMILY SSF53697 13 208 6.67E-40 T 13-10-2018 TREPR_3303 49da265f22f2edaf36512d9327dce108 176 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 13-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 TREPR_3303 49da265f22f2edaf36512d9327dce108 176 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 13-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 TREPR_3303 49da265f22f2edaf36512d9327dce108 176 PRINTS PR01011 Glutathione peroxidase family signature 56 72 1.7E-19 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TREPR_3303 49da265f22f2edaf36512d9327dce108 176 PRINTS PR01011 Glutathione peroxidase family signature 140 149 1.7E-19 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TREPR_3303 49da265f22f2edaf36512d9327dce108 176 PRINTS PR01011 Glutathione peroxidase family signature 21 38 1.7E-19 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TREPR_3303 49da265f22f2edaf36512d9327dce108 176 SUPERFAMILY SSF52833 2 176 7.4E-59 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_3303 49da265f22f2edaf36512d9327dce108 176 PIRSF PIRSF000303 1 176 2.3E-58 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TREPR_3303 49da265f22f2edaf36512d9327dce108 176 Gene3D G3DSA:3.40.30.10 1 176 9.9E-67 T 13-10-2018 TREPR_3303 49da265f22f2edaf36512d9327dce108 176 Pfam PF00255 Glutathione peroxidase 3 110 4.8E-40 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 SMART SM00387 358 473 6.9E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 Gene3D G3DSA:3.30.565.10 310 475 4.2E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 SMART SM00448 499 621 1.1E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 SUPERFAMILY SSF47226 604 745 1.44E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 Gene3D G3DSA:1.20.120.160 654 757 7.8E-11 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 Pfam PF00072 Response regulator receiver domain 501 620 1.0E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 Gene3D G3DSA:1.10.287.130 220 309 1.0E-26 T 13-10-2018 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 Pfam PF01627 Hpt domain 672 756 8.4E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 SUPERFAMILY SSF47384 232 312 2.55E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 SUPERFAMILY SSF52172 498 627 4.55E-31 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 Gene3D G3DSA:3.40.50.2300 496 645 3.2E-33 T 13-10-2018 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 SUPERFAMILY SSF55874 300 471 5.5E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 5.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 470 5.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 5.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 311 6.2E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 SMART SM00388 246 311 8.9E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2068 69f55bafc66c48518d1cad3ff1405dce 840 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 471 1.2E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3337 4678f8466cfa0ed1ee89c9b427a47a41 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3337 4678f8466cfa0ed1ee89c9b427a47a41 252 SUPERFAMILY SSF52540 1 238 1.73E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3337 4678f8466cfa0ed1ee89c9b427a47a41 252 PIRSF PIRSF039085 1 244 2.2E-98 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TREPR_3337 4678f8466cfa0ed1ee89c9b427a47a41 252 Pfam PF00005 ABC transporter 17 168 5.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3337 4678f8466cfa0ed1ee89c9b427a47a41 252 Gene3D G3DSA:3.40.50.300 1 250 6.4E-77 T 13-10-2018 TREPR_3337 4678f8466cfa0ed1ee89c9b427a47a41 252 SMART SM00382 26 216 2.7E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 Pfam PF00696 Amino acid kinase family 1 278 1.4E-55 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 SUPERFAMILY SSF53633 1 291 1.19E-79 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 Gene3D G3DSA:3.30.70.260 310 376 1.7E-44 T 13-10-2018 TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 Gene3D G3DSA:3.40.1160.10 3 289 5.4E-105 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 Gene3D G3DSA:3.30.70.260 302 442 1.7E-44 T 13-10-2018 TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 443 4.0E-117 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 PIRSF PIRSF000726 1 449 8.1E-116 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 Gene3D G3DSA:1.20.120.1320 40 133 5.4E-105 T 13-10-2018 TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 SUPERFAMILY SSF55021 298 386 4.89E-19 T 13-10-2018 TREPR_2974 77629cba5f5167856e203afcd86fdb10 451 SUPERFAMILY SSF55021 370 443 1.45E-13 T 13-10-2018 TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 59 78 7.0E-5 T 13-10-2018 TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 445 461 7.0E-5 T 13-10-2018 TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 SUPERFAMILY SSF52540 11 225 6.91E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 Gene3D G3DSA:1.20.272.10 247 351 6.5E-45 T 13-10-2018 TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 Gene3D G3DSA:3.40.50.300 11 167 1.7E-42 T 13-10-2018 TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 Pfam PF12002 MgsA AAA+ ATPase C terminal 274 433 1.7E-61 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 SMART SM00382 51 168 5.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 Pfam PF16193 AAA C-terminal domain 192 273 4.2E-25 T 13-10-2018 IPR032423 AAA C-terminal domain TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 Gene3D G3DSA:1.10.3710.10 354 443 1.8E-23 T 13-10-2018 TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 161 8.6E-15 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 SUPERFAMILY SSF48019 259 435 1.3E-63 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TREPR_2423 4b38f32a7394ca414b16b009c5c71637 774 Gene3D G3DSA:1.10.8.60 168 228 6.4E-15 T 13-10-2018 TREPR_1505 9d633fd27ba39b174fa87c90be42cb4b 326 Gene3D G3DSA:1.10.8.10 1 85 3.4E-19 T 13-10-2018 TREPR_1505 9d633fd27ba39b174fa87c90be42cb4b 326 Pfam PF05175 Methyltransferase small domain 141 186 1.2E-6 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 TREPR_1505 9d633fd27ba39b174fa87c90be42cb4b 326 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 142 320 9.3E-37 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 TREPR_1505 9d633fd27ba39b174fa87c90be42cb4b 326 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 320 5.8E-73 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TREPR_1505 9d633fd27ba39b174fa87c90be42cb4b 326 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 324 39.212 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TREPR_1505 9d633fd27ba39b174fa87c90be42cb4b 326 Gene3D G3DSA:3.40.50.150 86 324 4.3E-57 T 13-10-2018 TREPR_1505 9d633fd27ba39b174fa87c90be42cb4b 326 SUPERFAMILY SSF53335 2 321 9.64E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Gene3D G3DSA:3.90.199.10 39 493 3.1E-207 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 SUPERFAMILY SSF101904 506 822 3.79E-98 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TREPR_0282 57c37eabb175df74ad37e831104d6448 848 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 15 813 0.0 T 13-10-2018 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Gene3D G3DSA:1.10.268.10 376 464 3.1E-207 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 12 814 23.904 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 665 711 1.1E-14 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 561 609 4.1E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 717 760 3.5E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 766 811 2.0E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 513 557 2.8E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 618 661 4.2E-10 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 SMART SM00434 18 471 1.3E-267 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Gene3D G3DSA:3.30.1360.40 243 339 3.1E-207 T 13-10-2018 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 39 470 2.0E-154 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 SUPERFAMILY SSF56719 38 494 1.09E-170 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TREPR_0282 57c37eabb175df74ad37e831104d6448 848 Gene3D G3DSA:2.120.10.90 503 814 5.5E-113 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TREPR_0522 6036bcc5089f85638f11825c6b8d0e53 263 Pfam PF01890 Cobalamin synthesis G C-terminus 138 255 5.4E-33 T 13-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 TREPR_0522 6036bcc5089f85638f11825c6b8d0e53 263 SUPERFAMILY SSF159672 1 145 4.97E-40 T 13-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 TREPR_0522 6036bcc5089f85638f11825c6b8d0e53 263 Pfam PF11760 Cobalamin synthesis G N-terminal 49 128 5.3E-33 T 13-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 TREPR_0522 6036bcc5089f85638f11825c6b8d0e53 263 Gene3D G3DSA:3.30.420.180 128 260 1.1E-39 T 13-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TREPR_0522 6036bcc5089f85638f11825c6b8d0e53 263 Gene3D G3DSA:3.40.50.11220 1 123 5.5E-30 T 13-10-2018 TREPR_0522 6036bcc5089f85638f11825c6b8d0e53 263 SUPERFAMILY SSF159664 133 257 1.44E-37 T 13-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TREPR_0125 c4e3c5415d2f0741e7ecf6e955596b12 156 Hamap MF_00984 Single-stranded DNA-binding protein. 4 110 22.522 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TREPR_0125 c4e3c5415d2f0741e7ecf6e955596b12 156 SUPERFAMILY SSF50249 4 125 3.02E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_0125 c4e3c5415d2f0741e7ecf6e955596b12 156 Gene3D G3DSA:2.40.50.140 2 134 5.7E-30 T 13-10-2018 TREPR_0125 c4e3c5415d2f0741e7ecf6e955596b12 156 Pfam PF00436 Single-strand binding protein family 4 105 2.7E-25 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TREPR_0125 c4e3c5415d2f0741e7ecf6e955596b12 156 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 118 5.2E-25 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TREPR_2753 b3e6e0ad1ad8c155a36769f14ac8117b 112 Pfam PF01381 Helix-turn-helix 7 61 2.7E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2753 b3e6e0ad1ad8c155a36769f14ac8117b 112 Gene3D G3DSA:1.10.260.40 2 68 2.5E-11 T 13-10-2018 TREPR_2753 b3e6e0ad1ad8c155a36769f14ac8117b 112 SMART SM00530 6 61 2.4E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2753 b3e6e0ad1ad8c155a36769f14ac8117b 112 SUPERFAMILY SSF47413 1 66 3.94E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_2371 a427a4784573046cebfd7b6f671440b9 426 SMART SM00382 70 245 4.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2371 a427a4784573046cebfd7b6f671440b9 426 Gene3D G3DSA:3.40.50.300 49 275 1.5E-43 T 13-10-2018 TREPR_2371 a427a4784573046cebfd7b6f671440b9 426 SUPERFAMILY SSF52540 56 250 1.25E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2371 a427a4784573046cebfd7b6f671440b9 426 Pfam PF00005 ABC transporter 61 192 2.2E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 Pfam PF00691 OmpA family 1258 1335 3.0E-10 T 13-10-2018 IPR006665 OmpA-like domain TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 Gene3D G3DSA:3.30.1330.60 1205 1354 9.6E-22 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 Gene3D G3DSA:2.60.40.4070 908 985 6.1E-14 T 13-10-2018 TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 Gene3D G3DSA:2.60.40.4070 807 879 1.6E-9 T 13-10-2018 TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 SUPERFAMILY SSF103088 1258 1352 6.15E-21 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 Gene3D G3DSA:2.60.40.4070 350 453 4.5E-6 T 13-10-2018 TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 Gene3D G3DSA:2.60.40.4070 475 558 2.0E-10 T 13-10-2018 TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 Pfam PF13860 FlgD Ig-like domain 812 869 2.4E-7 T 13-10-2018 IPR025965 FlgD Ig-like domain TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 Pfam PF13860 FlgD Ig-like domain 914 976 5.2E-10 T 13-10-2018 IPR025965 FlgD Ig-like domain TREPR_1642 44f5dcddca7e08f6d9bb34772f272cba 1354 Pfam PF13860 FlgD Ig-like domain 497 550 1.1E-8 T 13-10-2018 IPR025965 FlgD Ig-like domain TREPR_0081 ec9d3ad42e2f15227a0596e55e71e45b 343 SUPERFAMILY SSF53822 61 341 1.37E-39 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0081 ec9d3ad42e2f15227a0596e55e71e45b 343 Gene3D G3DSA:1.10.260.40 1 59 5.8E-19 T 13-10-2018 TREPR_0081 ec9d3ad42e2f15227a0596e55e71e45b 343 Pfam PF13407 Periplasmic binding protein domain 72 319 1.4E-31 T 13-10-2018 IPR025997 Periplasmic binding protein TREPR_0081 ec9d3ad42e2f15227a0596e55e71e45b 343 SUPERFAMILY SSF47413 3 59 5.87E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0081 ec9d3ad42e2f15227a0596e55e71e45b 343 Gene3D G3DSA:3.40.50.2300 74 333 2.6E-50 T 13-10-2018 TREPR_0081 ec9d3ad42e2f15227a0596e55e71e45b 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 13-10-2018 TREPR_0081 ec9d3ad42e2f15227a0596e55e71e45b 343 SMART SM00354 2 73 1.8E-13 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0081 ec9d3ad42e2f15227a0596e55e71e45b 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 7.9E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0081 ec9d3ad42e2f15227a0596e55e71e45b 343 Gene3D G3DSA:3.40.50.2300 168 341 2.6E-50 T 13-10-2018 TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 SUPERFAMILY SSF51569 2 299 5.31E-84 T 13-10-2018 TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 Pfam PF00682 HMGL-like 3 269 4.0E-48 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 Gene3D G3DSA:2.40.50.100 521 587 5.6E-17 T 13-10-2018 TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 Gene3D G3DSA:2.40.50.100 617 685 3.4E-19 T 13-10-2018 TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 6 582 1.1E-243 T 13-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 SUPERFAMILY SSF51230 611 684 3.93E-16 T 13-10-2018 IPR011053 Single hybrid motif TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 Pfam PF02436 Conserved carboxylase domain 291 489 1.5E-50 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 SUPERFAMILY SSF89000 296 458 3.84E-47 T 13-10-2018 TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 Pfam PF00364 Biotin-requiring enzyme 619 684 5.2E-12 T 13-10-2018 IPR000089 Biotin/lipoyl attachment TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 Pfam PF00364 Biotin-requiring enzyme 522 586 2.7E-11 T 13-10-2018 IPR000089 Biotin/lipoyl attachment TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 SUPERFAMILY SSF51230 514 587 1.08E-14 T 13-10-2018 IPR011053 Single hybrid motif TREPR_1676 ec046ead5651266250c73c3401a92b6a 685 Gene3D G3DSA:3.20.20.70 1 455 1.0E-161 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0680 e8269770be2101c0e356923dd48ee32c 270 Pfam PF01048 Phosphorylase superfamily 60 235 3.1E-22 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TREPR_0680 e8269770be2101c0e356923dd48ee32c 270 SUPERFAMILY SSF53167 26 245 7.2E-33 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TREPR_0680 e8269770be2101c0e356923dd48ee32c 270 Gene3D G3DSA:3.40.50.1580 43 270 4.3E-33 T 13-10-2018 TREPR_3803 c771719f34c476ad961834043444d128 368 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TREPR_3803 c771719f34c476ad961834043444d128 368 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 3 366 1.7E-135 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TREPR_3803 c771719f34c476ad961834043444d128 368 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 367 46.192 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TREPR_3803 c771719f34c476ad961834043444d128 368 Pfam PF00266 Aminotransferase class-V 3 356 1.6E-44 T 13-10-2018 IPR000192 Aminotransferase class V domain TREPR_3803 c771719f34c476ad961834043444d128 368 Gene3D G3DSA:3.90.1150.10 260 368 5.9E-37 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3803 c771719f34c476ad961834043444d128 368 SUPERFAMILY SSF53383 2 365 2.12E-101 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3803 c771719f34c476ad961834043444d128 368 Gene3D G3DSA:3.40.640.10 16 258 8.3E-77 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3803 c771719f34c476ad961834043444d128 368 PIRSF PIRSF000525 1 368 1.2E-131 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TREPR_1182 1fb230a02dda5939a5c512c5540a5b4d 568 SUPERFAMILY SSF52540 139 440 4.75E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1182 1fb230a02dda5939a5c512c5540a5b4d 568 Gene3D G3DSA:3.40.50.300 294 504 2.4E-44 T 13-10-2018 TREPR_1182 1fb230a02dda5939a5c512c5540a5b4d 568 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 116 498 3.8E-79 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 TREPR_1182 1fb230a02dda5939a5c512c5540a5b4d 568 SMART SM00487 33 298 1.6E-24 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_1182 1fb230a02dda5939a5c512c5540a5b4d 568 Pfam PF00270 DEAD/DEAH box helicase 115 270 6.1E-13 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_1182 1fb230a02dda5939a5c512c5540a5b4d 568 Gene3D G3DSA:3.40.50.300 108 286 1.4E-47 T 13-10-2018 TREPR_1182 1fb230a02dda5939a5c512c5540a5b4d 568 Pfam PF00271 Helicase conserved C-terminal domain 316 421 2.9E-14 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1182 1fb230a02dda5939a5c512c5540a5b4d 568 SMART SM00490 333 422 2.6E-17 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 Gene3D G3DSA:3.40.30.60 352 495 4.0E-54 T 13-10-2018 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 Pfam PF00771 FHIPEP family 21 679 8.7E-244 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 10 687 5.2E-254 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 Gene3D G3DSA:1.10.8.540 496 587 3.4E-32 T 13-10-2018 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 PIRSF PIRSF005419 2 693 1.9E-236 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 1.9E-44 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 1.9E-44 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 65 84 1.9E-44 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 28 41 1.9E-44 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 1.9E-44 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 1.9E-44 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_2849 dd6c76be13e84ff541d7fe0e72b0f951 699 Gene3D G3DSA:1.10.490.80 589 687 3.9E-12 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 Gene3D G3DSA:3.50.50.60 146 272 1.4E-94 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_3835 cb759f629cb4be899c11715879ceb616 501 SUPERFAMILY SSF51905 1 339 1.44E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_3835 cb759f629cb4be899c11715879ceb616 501 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 329 6.5E-57 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 Gene3D G3DSA:3.30.390.30 381 499 1.2E-31 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 4.8E-31 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 4.8E-31 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.8E-31 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 4.8E-31 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 4.8E-31 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 383 491 1.1E-25 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 SUPERFAMILY SSF55424 381 493 1.05E-29 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 Gene3D G3DSA:3.50.50.60 4 333 1.4E-94 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 2.5E-55 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 2.5E-55 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.5E-55 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 444 459 2.5E-55 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 2.5E-55 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 2.5E-55 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 2.5E-55 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 466 486 2.5E-55 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 379 400 2.5E-55 T 13-10-2018 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PIRSF PIRSF000350 360 496 1.5E-13 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TREPR_3835 cb759f629cb4be899c11715879ceb616 501 PIRSF PIRSF000350 1 346 9.5E-59 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TREPR_0099 7e26e96e486d2a0c8d24756bbdc18f66 278 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 278 1.0E-43 T 13-10-2018 IPR010106 Recombination-promoting nuclease RpnA TREPR_0099 7e26e96e486d2a0c8d24756bbdc18f66 278 Pfam PF12784 PD-(D/E)XK nuclease family transposase 8 233 4.7E-45 T 13-10-2018 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 2.0E-29 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 SUPERFAMILY SSF51621 255 552 3.93E-104 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 PIRSF PIRSF000732 1 577 1.7E-215 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 SUPERFAMILY SSF47831 29 146 2.48E-29 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 Gene3D G3DSA:3.20.20.60 237 576 4.9E-120 T 13-10-2018 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 450 468 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 296 315 1.0E-22 T 13-10-2018 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 450 465 1.0E-22 T 13-10-2018 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 503 515 1.0E-22 T 13-10-2018 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 467 482 1.0E-22 T 13-10-2018 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 259 542 1.2E-109 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 Gene3D G3DSA:3.50.30.10 6 236 8.4E-79 T 13-10-2018 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 569 2.1E-192 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 187 198 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 Pfam PF00391 PEP-utilising enzyme, mobile domain 156 228 8.7E-24 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 SUPERFAMILY SSF52009 128 250 5.1E-36 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TREPR_3189 946d6d1d5ce7fab68f0b8afe4464c021 579 Gene3D G3DSA:1.10.274.10 23 149 8.4E-79 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TREPR_3030 551dad29a6b59d83de36ce52430eaba0 344 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3030 551dad29a6b59d83de36ce52430eaba0 344 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 320 4.6E-26 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_3030 551dad29a6b59d83de36ce52430eaba0 344 Pfam PF00005 ABC transporter 27 184 4.4E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3030 551dad29a6b59d83de36ce52430eaba0 344 SMART SM00382 35 249 5.2E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3030 551dad29a6b59d83de36ce52430eaba0 344 Gene3D G3DSA:3.40.50.300 4 337 1.4E-94 T 13-10-2018 TREPR_3030 551dad29a6b59d83de36ce52430eaba0 344 SUPERFAMILY SSF52540 6 255 1.08E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3030 551dad29a6b59d83de36ce52430eaba0 344 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 1.1E-16 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_2610 be155b2b40b16bdbee9752eaead690b8 654 Gene3D G3DSA:2.130.10.10 17 193 3.2E-15 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2610 be155b2b40b16bdbee9752eaead690b8 654 SUPERFAMILY SSF48371 534 631 2.45E-10 T 13-10-2018 IPR016024 Armadillo-type fold TREPR_2610 be155b2b40b16bdbee9752eaead690b8 654 SMART SM00564 38 68 68.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TREPR_2610 be155b2b40b16bdbee9752eaead690b8 654 SMART SM00564 77 108 10.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TREPR_2610 be155b2b40b16bdbee9752eaead690b8 654 SMART SM00564 418 450 110.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TREPR_2610 be155b2b40b16bdbee9752eaead690b8 654 SUPERFAMILY SSF50998 23 441 3.4E-14 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TREPR_2610 be155b2b40b16bdbee9752eaead690b8 654 Pfam PF13646 HEAT repeats 533 582 3.3E-7 T 13-10-2018 TREPR_2610 be155b2b40b16bdbee9752eaead690b8 654 Gene3D G3DSA:1.25.10.10 522 648 4.7E-6 T 13-10-2018 IPR011989 Armadillo-like helical TREPR_2610 be155b2b40b16bdbee9752eaead690b8 654 Pfam PF13360 PQQ-like domain 92 440 1.8E-7 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Gene3D G3DSA:1.10.287.130 541 624 5.8E-23 T 13-10-2018 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SMART SM00448 945 1062 5.6E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SMART SM00448 808 921 1.7E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Gene3D G3DSA:3.30.565.10 627 792 6.1E-52 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SUPERFAMILY SSF52172 806 927 1.99E-24 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Gene3D G3DSA:3.30.450.20 184 295 4.4E-17 T 13-10-2018 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Gene3D G3DSA:1.20.1480.50 296 381 1.3E-9 T 13-10-2018 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SUPERFAMILY SSF55874 615 786 1.7E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 674 788 4.8E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SUPERFAMILY SSF52172 943 1069 7.54E-34 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 733 743 1.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 750 768 1.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 715 729 1.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 PRINTS PR00344 Bacterial sensor protein C-terminal signature 774 787 1.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SUPERFAMILY SSF158472 322 375 1.57E-5 T 13-10-2018 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Pfam PF02743 Cache domain 46 283 2.8E-14 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SMART SM00304 322 377 3.7E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SMART SM00388 561 626 3.1E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Pfam PF00512 His Kinase A (phospho-acceptor) domain 561 625 2.1E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Pfam PF00072 Response regulator receiver domain 948 1061 4.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Pfam PF00072 Response regulator receiver domain 810 915 4.0E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Gene3D G3DSA:3.40.50.12740 945 1070 3.8E-38 T 13-10-2018 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Gene3D G3DSA:3.40.50.2300 802 941 1.3E-25 T 13-10-2018 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SMART SM00387 673 790 9.1E-40 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 Pfam PF00672 HAMP domain 322 373 1.5E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_1054 bd32fb16f4f32be38b0d6a716193c4fd 1070 SUPERFAMILY SSF47384 547 627 1.33E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0396 7a0cdb4fee92836e5208b68dd706985f 491 SUPERFAMILY SSF51658 202 488 1.96E-61 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily TREPR_0396 7a0cdb4fee92836e5208b68dd706985f 491 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 200 487 2.2E-130 T 13-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 TREPR_0396 7a0cdb4fee92836e5208b68dd706985f 491 Pfam PF01261 Xylose isomerase-like TIM barrel 232 443 7.7E-24 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TREPR_0396 7a0cdb4fee92836e5208b68dd706985f 491 Hamap MF_01672 Inosose dehydratase [iolE]. 196 491 54.863 T 13-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 TREPR_0396 7a0cdb4fee92836e5208b68dd706985f 491 Gene3D G3DSA:3.20.20.150 193 488 1.1E-84 T 13-10-2018 TREPR_0222 3014b114324560b7651c81663700629e 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 278 3.3E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0222 3014b114324560b7651c81663700629e 284 Gene3D G3DSA:1.10.3720.10 5 271 2.5E-45 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0222 3014b114324560b7651c81663700629e 284 SUPERFAMILY SSF161098 15 284 1.5E-55 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2558 8f6c91aab5533d29ca6ee7dce68b16e0 568 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 567 2.8E-109 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TREPR_2558 8f6c91aab5533d29ca6ee7dce68b16e0 568 Gene3D G3DSA:3.30.300.30 125 224 2.7E-8 T 13-10-2018 TREPR_2558 8f6c91aab5533d29ca6ee7dce68b16e0 568 PRINTS PR01009 Flagellar M-ring protein signature 200 218 2.2E-8 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TREPR_2558 8f6c91aab5533d29ca6ee7dce68b16e0 568 PRINTS PR01009 Flagellar M-ring protein signature 155 169 2.2E-8 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TREPR_2558 8f6c91aab5533d29ca6ee7dce68b16e0 568 PRINTS PR01009 Flagellar M-ring protein signature 274 292 2.2E-8 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TREPR_2558 8f6c91aab5533d29ca6ee7dce68b16e0 568 PRINTS PR01009 Flagellar M-ring protein signature 123 141 2.2E-8 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TREPR_2558 8f6c91aab5533d29ca6ee7dce68b16e0 568 Pfam PF01514 Secretory protein of YscJ/FliF family 31 224 3.2E-43 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF TREPR_2558 8f6c91aab5533d29ca6ee7dce68b16e0 568 Pfam PF08345 Flagellar M-ring protein C-terminal 261 450 4.5E-22 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal TREPR_0140 f108b37ba8b8ecae9c7a7e22873c6707 169 Pfam PF00583 Acetyltransferase (GNAT) family 49 142 1.5E-17 T 13-10-2018 IPR000182 GNAT domain TREPR_0140 f108b37ba8b8ecae9c7a7e22873c6707 169 Gene3D G3DSA:3.40.630.30 10 166 1.2E-42 T 13-10-2018 TREPR_0140 f108b37ba8b8ecae9c7a7e22873c6707 169 SUPERFAMILY SSF55729 12 156 1.86E-31 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 SUPERFAMILY SSF48726 301 387 9.49E-5 T 13-10-2018 IPR036179 Immunoglobulin-like domain superfamily TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 Gene3D G3DSA:2.60.40.10 309 396 5.5E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 Pfam PF02368 Bacterial Ig-like domain (group 2) 399 471 7.2E-5 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 Pfam PF02368 Bacterial Ig-like domain (group 2) 37 103 1.1E-6 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 SUPERFAMILY SSF50939 606 808 7.65E-7 T 13-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 Gene3D G3DSA:2.60.40.1080 397 485 3.5E-6 T 13-10-2018 TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 SMART SM00635 220 295 0.38 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 SMART SM00635 36 117 5.2 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 SMART SM00635 398 479 0.012 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 SMART SM00635 308 387 5.9 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_1135 9fde9c946250cc1bce436208ed8a08d0 810 SMART SM00635 129 207 3.1 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_0012 cb4b57f3aea93ed358c625406c501df4 369 Pfam PF00534 Glycosyl transferases group 1 188 336 3.5E-24 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_0012 cb4b57f3aea93ed358c625406c501df4 369 SUPERFAMILY SSF53756 4 337 6.8E-51 T 13-10-2018 TREPR_0012 cb4b57f3aea93ed358c625406c501df4 369 Gene3D G3DSA:3.40.50.2000 18 358 8.7E-46 T 13-10-2018 TREPR_0012 cb4b57f3aea93ed358c625406c501df4 369 Gene3D G3DSA:3.40.50.2000 177 355 8.7E-46 T 13-10-2018 TREPR_2399 9ae6177b31a75ed2275e72b37270d923 896 SUPERFAMILY SSF53649 564 778 6.17E-9 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TREPR_2399 9ae6177b31a75ed2275e72b37270d923 896 Pfam PF00884 Sulfatase 490 784 1.6E-7 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TREPR_2399 9ae6177b31a75ed2275e72b37270d923 896 Pfam PF02096 60Kd inner membrane protein 33 219 3.0E-21 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TREPR_2399 9ae6177b31a75ed2275e72b37270d923 896 Gene3D G3DSA:3.40.720.10 484 833 3.6E-14 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TREPR_0686 59887b34cdc912a6581b76bb96abb496 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.2E-30 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0686 59887b34cdc912a6581b76bb96abb496 88 Gene3D G3DSA:3.30.1340.10 1 86 4.8E-33 T 13-10-2018 IPR035895 HPr-like superfamily TREPR_0686 59887b34cdc912a6581b76bb96abb496 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.7E-18 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0686 59887b34cdc912a6581b76bb96abb496 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.7E-18 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0686 59887b34cdc912a6581b76bb96abb496 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.7E-18 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0686 59887b34cdc912a6581b76bb96abb496 88 SUPERFAMILY SSF55594 1 87 1.01E-28 T 13-10-2018 IPR035895 HPr-like superfamily TREPR_0686 59887b34cdc912a6581b76bb96abb496 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 8.5E-31 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0686 59887b34cdc912a6581b76bb96abb496 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site TREPR_0958 1da56c4c88f6610f0a12133697d0c650 688 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 512 673 5.3E-21 T 13-10-2018 IPR012912 Plasmid pRiA4b, Orf3 TREPR_0958 1da56c4c88f6610f0a12133697d0c650 688 Gene3D G3DSA:3.10.290.30 503 676 7.0E-24 T 13-10-2018 IPR024047 MM3350-like superfamily TREPR_0958 1da56c4c88f6610f0a12133697d0c650 688 SUPERFAMILY SSF159941 512 676 7.45E-26 T 13-10-2018 IPR024047 MM3350-like superfamily TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 SUPERFAMILY SSF51206 4 118 4.06E-19 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 Pfam PF13181 Tetratricopeptide repeat 283 314 0.0042 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 Gene3D G3DSA:2.60.120.10 1 107 2.7E-19 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 SMART SM00028 282 315 0.008 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 SMART SM00028 209 241 330.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 SMART SM00028 130 163 100.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 SMART SM00028 245 278 1.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 Pfam PF00027 Cyclic nucleotide-binding domain 6 92 3.2E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 SUPERFAMILY SSF48452 112 323 1.11E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 Pfam PF13174 Tetratricopeptide repeat 249 278 0.12 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 Pfam PF13174 Tetratricopeptide repeat 131 161 0.04 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3814 fd6bd4fd35756459a61249b6b0dcfc86 333 Gene3D G3DSA:1.25.40.10 208 331 1.4E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1672 20022ca48c34470940af69976d1d8a14 364 Pfam PF01497 Periplasmic binding protein 69 298 3.2E-19 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain TREPR_1672 20022ca48c34470940af69976d1d8a14 364 Gene3D G3DSA:3.40.50.1980 28 362 1.0E-77 T 13-10-2018 TREPR_1672 20022ca48c34470940af69976d1d8a14 364 SUPERFAMILY SSF53807 44 362 7.06E-60 T 13-10-2018 TREPR_1622 956a076f34ce2efa5fe4892bf8e4d48f 227 Pfam PF00696 Amino acid kinase family 1 202 2.4E-22 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TREPR_1622 956a076f34ce2efa5fe4892bf8e4d48f 227 Gene3D G3DSA:3.40.1160.10 3 226 3.3E-47 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_1622 956a076f34ce2efa5fe4892bf8e4d48f 227 PIRSF PIRSF005650 1 227 2.8E-42 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 TREPR_1622 956a076f34ce2efa5fe4892bf8e4d48f 227 SUPERFAMILY SSF53633 2 226 2.23E-33 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_1622 956a076f34ce2efa5fe4892bf8e4d48f 227 TIGRFAM TIGR02076 pyrH_arch: putative uridylate kinase 4 226 1.6E-53 T 13-10-2018 IPR011818 Uridylate kinase, archaeal/spirochete, putative GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 TREPR_2975 8e32f0868a25640b64ed21222443fdd5 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 117 260 3.0E-30 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TREPR_2975 8e32f0868a25640b64ed21222443fdd5 269 SUPERFAMILY SSF55347 116 223 2.05E-22 T 13-10-2018 TREPR_2975 8e32f0868a25640b64ed21222443fdd5 269 SUPERFAMILY SSF51735 2 243 1.54E-20 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2975 8e32f0868a25640b64ed21222443fdd5 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 114 1.1E-13 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TREPR_2975 8e32f0868a25640b64ed21222443fdd5 269 PIRSF PIRSF000161 1 261 3.5E-51 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TREPR_2975 8e32f0868a25640b64ed21222443fdd5 269 Gene3D G3DSA:3.40.50.720 2 243 2.6E-67 T 13-10-2018 TREPR_2975 8e32f0868a25640b64ed21222443fdd5 269 Gene3D G3DSA:3.30.360.10 115 221 2.6E-67 T 13-10-2018 TREPR_0658 1a7edaf252b81e2bfe6833c05e61526c 553 SUPERFAMILY SSF161098 299 547 1.31E-38 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0658 1a7edaf252b81e2bfe6833c05e61526c 553 Gene3D G3DSA:1.10.3720.10 296 548 2.0E-41 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0658 1a7edaf252b81e2bfe6833c05e61526c 553 Gene3D G3DSA:1.10.3720.10 25 278 3.6E-59 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0658 1a7edaf252b81e2bfe6833c05e61526c 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 275 5.0E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0658 1a7edaf252b81e2bfe6833c05e61526c 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 368 544 2.2E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0658 1a7edaf252b81e2bfe6833c05e61526c 553 SUPERFAMILY SSF161098 26 276 3.92E-49 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1600 a4d46efa493b154b65587eeb4b01c051 854 Gene3D G3DSA:2.60.420.10 333 817 5.7E-153 T 13-10-2018 TREPR_1600 a4d46efa493b154b65587eeb4b01c051 854 SMART SM01068 1 63 3.7E-4 T 13-10-2018 IPR009342 Putative carbohydrate binding domain TREPR_1600 a4d46efa493b154b65587eeb4b01c051 854 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 324 761 1.7E-169 T 13-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain TREPR_1600 a4d46efa493b154b65587eeb4b01c051 854 SUPERFAMILY SSF74650 1 295 1.91E-59 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TREPR_1600 a4d46efa493b154b65587eeb4b01c051 854 Gene3D G3DSA:1.50.10.10 338 760 5.7E-153 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TREPR_1600 a4d46efa493b154b65587eeb4b01c051 854 SUPERFAMILY SSF48208 302 815 4.01E-93 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TREPR_1600 a4d46efa493b154b65587eeb4b01c051 854 Gene3D G3DSA:2.70.98.40 1 330 1.3E-92 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily TREPR_1600 a4d46efa493b154b65587eeb4b01c051 854 Pfam PF06165 Glycosyltransferase family 36 21 294 1.3E-86 T 13-10-2018 IPR010383 Glycosyl hydrolase 94 TREPR_3799 79db248f2946671c9736054b6e1fc4d7 770 SUPERFAMILY SSF103473 20 417 8.63E-25 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_3799 79db248f2946671c9736054b6e1fc4d7 770 Gene3D G3DSA:1.20.1250.20 18 209 2.0E-5 T 13-10-2018 TREPR_3799 79db248f2946671c9736054b6e1fc4d7 770 Gene3D G3DSA:1.20.1250.20 221 418 2.3E-8 T 13-10-2018 TREPR_3799 79db248f2946671c9736054b6e1fc4d7 770 Gene3D G3DSA:1.25.10.10 503 687 1.6E-10 T 13-10-2018 IPR011989 Armadillo-like helical TREPR_3799 79db248f2946671c9736054b6e1fc4d7 770 SUPERFAMILY SSF48371 433 644 1.27E-13 T 13-10-2018 IPR016024 Armadillo-type fold TREPR_3799 79db248f2946671c9736054b6e1fc4d7 770 Pfam PF07690 Major Facilitator Superfamily 22 375 2.8E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TREPR_2814 73c4bbbeb64510072e36e4e68eca20ba 253 SUPERFAMILY SSF55729 16 229 1.17E-80 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_2814 73c4bbbeb64510072e36e4e68eca20ba 253 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 45 214 7.7E-67 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TREPR_2814 73c4bbbeb64510072e36e4e68eca20ba 253 Gene3D G3DSA:2.30.210.20 15 69 8.9E-19 T 13-10-2018 TREPR_2814 73c4bbbeb64510072e36e4e68eca20ba 253 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 47 229 3.5E-57 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TREPR_2814 73c4bbbeb64510072e36e4e68eca20ba 253 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 253 80.791 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TREPR_2814 73c4bbbeb64510072e36e4e68eca20ba 253 Gene3D G3DSA:3.40.630.70 70 240 5.2E-60 T 13-10-2018 TREPR_3286 bc905e3582a34cc9157edb0a198fe471 163 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 9 152 2.0E-47 T 13-10-2018 TREPR_3286 bc905e3582a34cc9157edb0a198fe471 163 PIRSF PIRSF000216 1 162 1.0E-47 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3286 bc905e3582a34cc9157edb0a198fe471 163 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 110 128 - T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3286 bc905e3582a34cc9157edb0a198fe471 163 Gene3D G3DSA:3.40.30.10 70 163 5.6E-26 T 13-10-2018 TREPR_3286 bc905e3582a34cc9157edb0a198fe471 163 Gene3D G3DSA:1.10.10.1590 5 68 8.5E-13 T 13-10-2018 TREPR_3286 bc905e3582a34cc9157edb0a198fe471 163 SUPERFAMILY SSF52833 5 155 4.92E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_1488 0dbc3740f05508806e400081cd92be6c 120 SMART SM00739 17 44 2.0E-6 T 13-10-2018 IPR005824 KOW TREPR_1488 0dbc3740f05508806e400081cd92be6c 120 ProSitePatterns PS01108 Ribosomal protein L24 signature. 21 38 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1488 0dbc3740f05508806e400081cd92be6c 120 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 16 114 20.238 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1488 0dbc3740f05508806e400081cd92be6c 120 Pfam PF00467 KOW motif 20 51 3.0E-9 T 13-10-2018 IPR005824 KOW TREPR_1488 0dbc3740f05508806e400081cd92be6c 120 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 16 119 9.2E-35 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1488 0dbc3740f05508806e400081cd92be6c 120 SUPERFAMILY SSF50104 10 118 1.25E-29 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily TREPR_1488 0dbc3740f05508806e400081cd92be6c 120 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 54 119 1.2E-21 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1488 0dbc3740f05508806e400081cd92be6c 120 Gene3D G3DSA:2.30.30.30 7 119 2.3E-36 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 TREPR_2331 68dd33c0548ea6df87102e15ef579ccd 384 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 368 1.8E-104 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_2331 68dd33c0548ea6df87102e15ef579ccd 384 SUPERFAMILY SSF53187 11 382 2.96E-73 T 13-10-2018 TREPR_2331 68dd33c0548ea6df87102e15ef579ccd 384 SUPERFAMILY SSF55031 181 288 6.15E-27 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_2331 68dd33c0548ea6df87102e15ef579ccd 384 PIRSF PIRSF005962 3 384 1.2E-107 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_2331 68dd33c0548ea6df87102e15ef579ccd 384 Pfam PF01546 Peptidase family M20/M25/M40 72 376 2.1E-28 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_2331 68dd33c0548ea6df87102e15ef579ccd 384 Gene3D G3DSA:3.40.630.10 18 364 2.6E-125 T 13-10-2018 TREPR_2331 68dd33c0548ea6df87102e15ef579ccd 384 Pfam PF07687 Peptidase dimerisation domain 181 278 1.8E-12 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain TREPR_2331 68dd33c0548ea6df87102e15ef579ccd 384 Gene3D G3DSA:3.30.70.360 180 294 2.6E-125 T 13-10-2018 TREPR_0061 e98813966f61d8b7961edb3f1379977c 293 Pfam PF04452 RNA methyltransferase 16 277 3.6E-44 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TREPR_0061 e98813966f61d8b7961edb3f1379977c 293 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 280 9.4E-33 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TREPR_0061 e98813966f61d8b7961edb3f1379977c 293 SUPERFAMILY SSF75217 91 278 1.15E-34 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases TREPR_0061 e98813966f61d8b7961edb3f1379977c 293 Gene3D G3DSA:3.40.1280.10 1 288 5.5E-56 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TREPR_0061 e98813966f61d8b7961edb3f1379977c 293 PIRSF PIRSF015601 1 282 1.4E-46 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TREPR_1280 80986eeff9dc053c204b34930568c6b6 354 SUPERFAMILY SSF53901 11 354 2.34E-58 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 TREPR_1280 80986eeff9dc053c204b34930568c6b6 354 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 14 354 62.096 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TREPR_1280 80986eeff9dc053c204b34930568c6b6 354 Gene3D G3DSA:3.40.47.10 13 354 4.3E-122 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 TREPR_1280 80986eeff9dc053c204b34930568c6b6 354 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 128 213 3.9E-25 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TREPR_1280 80986eeff9dc053c204b34930568c6b6 354 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 265 354 2.4E-34 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TREPR_1280 80986eeff9dc053c204b34930568c6b6 354 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 15 354 1.7E-98 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TREPR_1493 b6796496ad89641240958b2934e40af5 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 120 7.4E-38 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1493 b6796496ad89641240958b2934e40af5 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 7 120 1.1E-40 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1493 b6796496ad89641240958b2934e40af5 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 7 120 25.85 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1493 b6796496ad89641240958b2934e40af5 120 SUPERFAMILY SSF53137 8 118 3.92E-43 T 13-10-2018 TREPR_1493 b6796496ad89641240958b2934e40af5 120 Gene3D G3DSA:3.30.420.100 6 120 7.2E-39 T 13-10-2018 TREPR_2734 9221ac36e916f9dc223705582e772899 566 Pfam PF02384 N-6 DNA Methylase 156 519 1.2E-77 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TREPR_2734 9221ac36e916f9dc223705582e772899 566 SUPERFAMILY SSF53335 8 562 2.74E-107 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2734 9221ac36e916f9dc223705582e772899 566 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 277 289 7.0E-18 T 13-10-2018 TREPR_2734 9221ac36e916f9dc223705582e772899 566 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 179 195 7.0E-18 T 13-10-2018 TREPR_2734 9221ac36e916f9dc223705582e772899 566 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 216 7.0E-18 T 13-10-2018 TREPR_2734 9221ac36e916f9dc223705582e772899 566 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 325 349 7.0E-18 T 13-10-2018 TREPR_2734 9221ac36e916f9dc223705582e772899 566 Pfam PF12161 HsdM N-terminal domain 9 147 2.6E-20 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TREPR_2734 9221ac36e916f9dc223705582e772899 566 Gene3D G3DSA:3.40.50.150 157 466 1.8E-83 T 13-10-2018 TREPR_2734 9221ac36e916f9dc223705582e772899 566 Gene3D G3DSA:1.20.1260.30 1 149 2.2E-15 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TREPR_1324 d2871d8942eb5c17b3ad8df6380bde0f 335 Pfam PF07836 DmpG-like communication domain 272 333 5.7E-32 T 13-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 TREPR_1324 d2871d8942eb5c17b3ad8df6380bde0f 335 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 5 334 5.4E-152 T 13-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 TREPR_1324 d2871d8942eb5c17b3ad8df6380bde0f 335 Gene3D G3DSA:3.20.20.70 2 266 2.4E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1324 d2871d8942eb5c17b3ad8df6380bde0f 335 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 335 165.788 T 13-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 TREPR_1324 d2871d8942eb5c17b3ad8df6380bde0f 335 SUPERFAMILY SSF89000 286 334 7.06E-19 T 13-10-2018 TREPR_1324 d2871d8942eb5c17b3ad8df6380bde0f 335 Pfam PF00682 HMGL-like 5 262 3.7E-58 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TREPR_1324 d2871d8942eb5c17b3ad8df6380bde0f 335 Gene3D G3DSA:1.10.8.60 273 335 2.2E-30 T 13-10-2018 TREPR_1324 d2871d8942eb5c17b3ad8df6380bde0f 335 SUPERFAMILY SSF51569 3 270 2.38E-66 T 13-10-2018 TREPR_1324 d2871d8942eb5c17b3ad8df6380bde0f 335 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 270 334 4.0E-25 T 13-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 303 42.977 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 6 303 2.2E-120 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 100 118 2.1E-42 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 75 86 2.1E-42 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 121 137 2.1E-42 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 184 193 2.1E-42 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 140 153 2.1E-42 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.1E-42 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 SUPERFAMILY SSF52096 29 303 1.2E-86 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 135 8.1E-51 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1268 f3a1124495737adbbb4f15e6d92d651d 309 Gene3D G3DSA:3.90.226.10 4 305 2.3E-103 T 13-10-2018 TREPR_2780 88265b224ae8858a5a143e2cf315c374 825 SUPERFAMILY SSF48452 615 705 2.39E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2780 88265b224ae8858a5a143e2cf315c374 825 Gene3D G3DSA:3.10.620.30 394 470 3.5E-5 T 13-10-2018 TREPR_2780 88265b224ae8858a5a143e2cf315c374 825 SMART SM00028 656 689 30.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2780 88265b224ae8858a5a143e2cf315c374 825 SMART SM00028 622 655 0.0022 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2780 88265b224ae8858a5a143e2cf315c374 825 Pfam PF13432 Tetratricopeptide repeat 626 687 2.8E-10 T 13-10-2018 TREPR_2780 88265b224ae8858a5a143e2cf315c374 825 Gene3D G3DSA:3.10.350.10 760 813 2.4E-6 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_2780 88265b224ae8858a5a143e2cf315c374 825 Gene3D G3DSA:1.25.40.10 554 754 3.4E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 242 371 7.8E-22 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 12 492 29.248 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 Pfam PF12631 MnmE helical domain 134 489 3.4E-37 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 Pfam PF10396 GTP-binding protein TrmE N-terminus 14 131 2.9E-28 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 Gene3D G3DSA:3.40.50.300 239 417 4.2E-92 T 13-10-2018 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 Gene3D G3DSA:1.20.120.430 132 492 4.2E-92 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 18 492 3.7E-102 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 SUPERFAMILY SSF52540 240 413 3.35E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 Gene3D G3DSA:3.30.1360.120 3 131 4.5E-33 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 Pfam PF01926 50S ribosome-binding GTPase 242 357 2.9E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 SUPERFAMILY SSF103025 12 131 1.18E-28 T 13-10-2018 TREPR_1080 3a58482dad0639e923c6012f5c9bc7a6 492 SUPERFAMILY SSF116878 132 492 2.09E-30 T 13-10-2018 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 Gene3D G3DSA:1.10.10.10 6 68 3.2E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 SUPERFAMILY SSF55252 86 150 1.44E-11 T 13-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 136 8.0E-6 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 PRINTS PR01467 Bacterial arginine repressor signature 22 35 4.7E-15 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 PRINTS PR01467 Bacterial arginine repressor signature 38 53 4.7E-15 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 PRINTS PR01467 Bacterial arginine repressor signature 120 135 4.7E-15 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 PRINTS PR01467 Bacterial arginine repressor signature 90 103 4.7E-15 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 Hamap MF_00173 Arginine repressor [argR]. 1 155 42.193 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 SUPERFAMILY SSF46785 4 70 5.89E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 Pfam PF02863 Arginine repressor, C-terminal domain 84 149 1.6E-20 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 Gene3D G3DSA:3.30.1360.40 74 151 5.5E-16 T 13-10-2018 TREPR_2248 41aaa37a33b12b999271dfd600edcc45 157 Pfam PF01316 Arginine repressor, DNA binding domain 4 70 5.8E-17 T 13-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 TREPR_2244 638908404733c8fc9e1f250207195944 894 SUPERFAMILY SSF48334 201 343 1.83E-7 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TREPR_2244 638908404733c8fc9e1f250207195944 894 Gene3D G3DSA:3.30.1370.110 811 894 2.3E-18 T 13-10-2018 TREPR_2244 638908404733c8fc9e1f250207195944 894 SMART SM00463 815 893 6.6E-7 T 13-10-2018 IPR002625 Smr domain TREPR_2244 638908404733c8fc9e1f250207195944 894 Pfam PF00488 MutS domain V 389 570 4.7E-34 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TREPR_2244 638908404733c8fc9e1f250207195944 894 Gene3D G3DSA:3.40.50.300 354 656 1.1E-74 T 13-10-2018 TREPR_2244 638908404733c8fc9e1f250207195944 894 SMART SM00534 386 571 7.3E-68 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TREPR_2244 638908404733c8fc9e1f250207195944 894 PIRSF PIRSF005814 156 893 8.5E-180 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 TREPR_2244 638908404733c8fc9e1f250207195944 894 PIRSF PIRSF005814 1 130 4.5E-5 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 TREPR_2244 638908404733c8fc9e1f250207195944 894 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 468 484 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TREPR_2244 638908404733c8fc9e1f250207195944 894 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 892 18.161 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 TREPR_2244 638908404733c8fc9e1f250207195944 894 Pfam PF01713 Smr domain 820 893 3.6E-14 T 13-10-2018 IPR002625 Smr domain TREPR_2244 638908404733c8fc9e1f250207195944 894 SUPERFAMILY SSF52540 358 572 5.61E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1286 6e48094a2458038ab9a9358b3e47b3d9 88 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 84 3.5E-26 T 13-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein TREPR_1286 6e48094a2458038ab9a9358b3e47b3d9 88 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 80 2.0E-14 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TREPR_1286 6e48094a2458038ab9a9358b3e47b3d9 88 PIRSF PIRSF002736 1 88 2.6E-29 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TREPR_1286 6e48094a2458038ab9a9358b3e47b3d9 88 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 88 6.4E-27 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TREPR_0933 860d427180b2f1c55d4fe2f0f0aea74e 326 SMART SM00382 32 231 8.5E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0933 860d427180b2f1c55d4fe2f0f0aea74e 326 SUPERFAMILY SSF52540 32 307 4.05E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0933 860d427180b2f1c55d4fe2f0f0aea74e 326 Pfam PF00005 ABC transporter 24 182 5.1E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0933 860d427180b2f1c55d4fe2f0f0aea74e 326 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0933 860d427180b2f1c55d4fe2f0f0aea74e 326 Gene3D G3DSA:3.40.50.300 1 324 4.8E-104 T 13-10-2018 TREPR_0933 860d427180b2f1c55d4fe2f0f0aea74e 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 1.3E-21 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0933 860d427180b2f1c55d4fe2f0f0aea74e 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 318 2.2E-30 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1085 2f4c3b096875f72783f4dbd4c8dd7e15 332 PIRSF PIRSF001359 7 332 2.6E-85 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TREPR_1085 2f4c3b096875f72783f4dbd4c8dd7e15 332 SUPERFAMILY SSF51569 9 332 6.74E-94 T 13-10-2018 TREPR_1085 2f4c3b096875f72783f4dbd4c8dd7e15 332 Pfam PF01116 Fructose-bisphosphate aldolase class-II 10 331 6.7E-95 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TREPR_1085 2f4c3b096875f72783f4dbd4c8dd7e15 332 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 9 331 1.5E-80 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TREPR_1085 2f4c3b096875f72783f4dbd4c8dd7e15 332 Gene3D G3DSA:3.20.20.70 1 332 3.9E-119 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1085 2f4c3b096875f72783f4dbd4c8dd7e15 332 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 84 95 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TREPR_1085 2f4c3b096875f72783f4dbd4c8dd7e15 332 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 9 332 7.1E-113 T 13-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 TREPR_2094 fafe415f1a5648706b83d6b9cdf86584 462 Pfam PF08706 D5 N terminal like 30 181 6.1E-31 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal TREPR_2094 fafe415f1a5648706b83d6b9cdf86584 462 SMART SM00885 30 182 1.2E-36 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal TREPR_2094 fafe415f1a5648706b83d6b9cdf86584 462 Pfam PF03288 Poxvirus D5 protein-like 388 450 9.6E-5 T 13-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal TREPR_2094 fafe415f1a5648706b83d6b9cdf86584 462 Gene3D G3DSA:3.40.50.300 177 354 2.5E-6 T 13-10-2018 TREPR_2094 fafe415f1a5648706b83d6b9cdf86584 462 SUPERFAMILY SSF52540 153 360 3.46E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2094 fafe415f1a5648706b83d6b9cdf86584 462 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 132 430 4.5E-99 T 13-10-2018 IPR006500 DNA primase, phage/plasmid TREPR_2897 46644e1e516eb8e389854da37f53f649 392 SUPERFAMILY SSF103473 9 384 6.28E-35 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_2897 46644e1e516eb8e389854da37f53f649 392 Pfam PF07690 Major Facilitator Superfamily 12 343 2.0E-28 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TREPR_2897 46644e1e516eb8e389854da37f53f649 392 Gene3D G3DSA:1.20.1250.20 6 380 1.6E-29 T 13-10-2018 TREPR_0491 4bee83b42da74c6f705fe4741a4c33e8 362 Gene3D G3DSA:3.90.870.10 2 221 3.5E-73 T 13-10-2018 TREPR_0491 4bee83b42da74c6f705fe4741a4c33e8 362 Gene3D G3DSA:3.40.50.11030 242 362 8.6E-14 T 13-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily TREPR_0491 4bee83b42da74c6f705fe4741a4c33e8 362 SUPERFAMILY SSF55821 10 219 4.27E-58 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TREPR_0491 4bee83b42da74c6f705fe4741a4c33e8 362 Pfam PF03481 Putative GTP-binding controlling metal-binding 210 360 1.7E-15 T 13-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain TREPR_0491 4bee83b42da74c6f705fe4741a4c33e8 362 Pfam PF01300 Telomere recombination 18 190 7.1E-51 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 TREPR_0491 4bee83b42da74c6f705fe4741a4c33e8 362 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 9 217 6.8E-51 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 TREPR_0491 4bee83b42da74c6f705fe4741a4c33e8 362 PIRSF PIRSF004930 1 362 2.6E-96 T 13-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 SUPERFAMILY SSF55124 3 96 2.91E-22 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 Gene3D G3DSA:3.30.413.10 211 288 6.2E-7 T 13-10-2018 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 Pfam PF13187 4Fe-4S dicluster domain 165 210 2.9E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 Gene3D G3DSA:3.30.70.3340 19 89 8.0E-7 T 13-10-2018 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 166 177 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 SUPERFAMILY SSF54862 139 218 3.77E-18 T 13-10-2018 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 PRINTS PR00397 Sirohaem Fe-binding site signature 137 155 1.3E-5 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 PRINTS PR00397 Sirohaem Fe-binding site signature 94 112 1.3E-5 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 SUPERFAMILY SSF56014 92 285 4.71E-33 T 13-10-2018 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 90 286 2.5E-26 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 137 153 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 Gene3D G3DSA:3.30.413.10 90 161 5.1E-19 T 13-10-2018 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 17 80 1.8E-18 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_0243 6be9cead0a342336869ce58199ea11f5 288 Gene3D G3DSA:3.30.70.20 162 210 3.3E-12 T 13-10-2018 TREPR_3296 9df4e0ed7307dd502463420b31e7731c 126 Gene3D G3DSA:1.25.40.10 23 124 2.2E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3296 9df4e0ed7307dd502463420b31e7731c 126 SUPERFAMILY SSF48452 34 103 5.26E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1830 1a36f74810ebe2f575c31bf3982d5aa1 143 SUPERFAMILY SSF55729 1 133 1.8E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_1830 1a36f74810ebe2f575c31bf3982d5aa1 143 Pfam PF00583 Acetyltransferase (GNAT) family 31 125 2.9E-16 T 13-10-2018 IPR000182 GNAT domain TREPR_1830 1a36f74810ebe2f575c31bf3982d5aa1 143 Gene3D G3DSA:3.40.630.30 1 136 1.1E-31 T 13-10-2018 TREPR_3160 7f276282b011ea3edb9d4097b7bad86a 443 Gene3D G3DSA:1.10.3210.10 111 370 3.0E-58 T 13-10-2018 TREPR_3160 7f276282b011ea3edb9d4097b7bad86a 443 SUPERFAMILY SSF109604 199 368 7.71E-27 T 13-10-2018 TREPR_3160 7f276282b011ea3edb9d4097b7bad86a 443 Pfam PF11871 Domain of unknown function (DUF3391) 2 73 1.2E-6 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 TREPR_3160 7f276282b011ea3edb9d4097b7bad86a 443 Pfam PF13487 HD domain 257 320 3.8E-16 T 13-10-2018 TREPR_2687 5d610da8a78e3673cb258dcc548ee77c 453 Pfam PF01966 HD domain 247 332 1.9E-12 T 13-10-2018 IPR006674 HD domain TREPR_2687 5d610da8a78e3673cb258dcc548ee77c 453 SMART SM00471 243 418 9.4E-4 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_2687 5d610da8a78e3673cb258dcc548ee77c 453 SUPERFAMILY SSF81301 7 142 1.85E-41 T 13-10-2018 TREPR_2687 5d610da8a78e3673cb258dcc548ee77c 453 Gene3D G3DSA:1.10.3090.10 145 438 1.2E-55 T 13-10-2018 TREPR_2687 5d610da8a78e3673cb258dcc548ee77c 453 Pfam PF01743 Poly A polymerase head domain 24 145 6.5E-40 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TREPR_2687 5d610da8a78e3673cb258dcc548ee77c 453 Gene3D G3DSA:3.30.460.10 6 144 8.9E-50 T 13-10-2018 TREPR_2687 5d610da8a78e3673cb258dcc548ee77c 453 TIGRFAM TIGR00277 HDIG: HDIG domain 253 318 2.8E-8 T 13-10-2018 IPR006675 HDIG domain TREPR_2687 5d610da8a78e3673cb258dcc548ee77c 453 SUPERFAMILY SSF81891 143 444 9.94E-60 T 13-10-2018 TREPR_2687 5d610da8a78e3673cb258dcc548ee77c 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 172 233 2.6E-17 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TREPR_3643 9f7126623a786c28c8be3fc489521de8 130 SUPERFAMILY SSF47413 3 69 1.64E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3643 9f7126623a786c28c8be3fc489521de8 130 Gene3D G3DSA:1.10.260.40 7 72 9.5E-12 T 13-10-2018 TREPR_3643 9f7126623a786c28c8be3fc489521de8 130 Pfam PF01381 Helix-turn-helix 13 65 3.0E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3643 9f7126623a786c28c8be3fc489521de8 130 SMART SM00530 10 65 1.8E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 266 274 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 SUPERFAMILY SSF55973 240 388 2.16E-69 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 388 2.5E-185 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 Gene3D G3DSA:3.30.300.10 8 241 6.8E-172 T 13-10-2018 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 122 132 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 SUPERFAMILY SSF55973 5 110 1.33E-43 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 388 57.799 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 240 377 1.4E-67 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 Gene3D G3DSA:3.30.300.10 105 382 6.8E-172 T 13-10-2018 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 120 238 5.4E-47 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 Gene3D G3DSA:3.30.300.10 13 278 6.8E-172 T 13-10-2018 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 1.2E-39 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 PIRSF PIRSF000497 1 389 1.6E-173 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_1033 df344d2ff58fdcdc3a6be1cc3c45adbd 389 SUPERFAMILY SSF55973 117 239 7.06E-50 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TREPR_2852 ea685482b3dc4910246f74f9d2d75688 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.1E-26 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TREPR_2852 ea685482b3dc4910246f74f9d2d75688 89 PIRSF PIRSF004669 1 89 2.9E-28 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TREPR_2852 ea685482b3dc4910246f74f9d2d75688 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 9.5E-30 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 TREPR_2852 ea685482b3dc4910246f74f9d2d75688 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.2E-21 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TREPR_2852 ea685482b3dc4910246f74f9d2d75688 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.2E-21 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TREPR_2852 ea685482b3dc4910246f74f9d2d75688 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.2E-21 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TREPR_2622 8ad90380c88d34b5c4d10af6b1a60f0b 89 Hamap MF_01054 UPF0237 protein . 1 89 24.199 T 13-10-2018 IPR022986 Uncharacterised protein family UPF0237, ACT-type TREPR_2622 8ad90380c88d34b5c4d10af6b1a60f0b 89 Gene3D G3DSA:3.30.70.260 1 89 3.5E-27 T 13-10-2018 TREPR_2622 8ad90380c88d34b5c4d10af6b1a60f0b 89 Pfam PF13740 ACT domain 4 76 5.2E-13 T 13-10-2018 TREPR_2622 8ad90380c88d34b5c4d10af6b1a60f0b 89 SUPERFAMILY SSF55021 2 83 1.22E-20 T 13-10-2018 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 SUPERFAMILY SSF55785 56 177 2.44E-11 T 13-10-2018 IPR035965 PAS domain superfamily TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 SUPERFAMILY SSF47384 178 258 3.73E-23 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 SMART SM00448 437 551 1.1E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 Pfam PF00072 Response regulator receiver domain 439 548 2.9E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 Gene3D G3DSA:1.10.287.130 176 255 5.7E-29 T 13-10-2018 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 SUPERFAMILY SSF52172 436 555 2.7E-29 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 SMART SM00387 304 416 8.8E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 Pfam PF00512 His Kinase A (phospho-acceptor) domain 192 257 6.0E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 SUPERFAMILY SSF55874 246 416 3.27E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 2.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 413 2.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 369 2.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 355 2.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 Gene3D G3DSA:3.30.565.10 256 417 6.9E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 SMART SM00388 192 257 3.3E-25 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 Gene3D G3DSA:3.40.50.12740 436 560 4.3E-34 T 13-10-2018 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 Gene3D G3DSA:3.30.450.20 57 175 2.3E-9 T 13-10-2018 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 Pfam PF08448 PAS fold 66 178 1.2E-6 T 13-10-2018 IPR013656 PAS fold-4 TREPR_0698 84a12278d4177c57b8a97416a026c27a 564 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 304 415 7.4E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1050 4eb349d6776991d43994a527a3388fd2 171 Hamap MF_00269 Thiol peroxidase [tpx]. 3 166 33.678 T 13-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 TREPR_1050 4eb349d6776991d43994a527a3388fd2 171 Gene3D G3DSA:3.40.30.10 2 167 1.5E-41 T 13-10-2018 TREPR_1050 4eb349d6776991d43994a527a3388fd2 171 SUPERFAMILY SSF52833 1 163 2.42E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_1050 4eb349d6776991d43994a527a3388fd2 171 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 13-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 TREPR_1050 4eb349d6776991d43994a527a3388fd2 171 Pfam PF08534 Redoxin 21 162 6.7E-19 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Gene3D G3DSA:3.40.50.300 422 631 1.5E-85 T 13-10-2018 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 SMART SM00958 228 363 2.7E-54 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 SUPERFAMILY SSF81767 269 372 1.12E-34 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 ProSitePatterns PS01312 SecA family signature. 505 520 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Pfam PF02810 SEC-C motif 908 926 8.9E-9 T 13-10-2018 IPR004027 SEC-C motif TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Pfam PF07516 SecA Wing and Scaffold domain 628 835 3.3E-59 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 PRINTS PR00906 SecA protein signature 117 127 5.1E-69 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 PRINTS PR00906 SecA protein signature 101 115 5.1E-69 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 PRINTS PR00906 SecA protein signature 344 366 5.1E-69 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 PRINTS PR00906 SecA protein signature 63 87 5.1E-69 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 PRINTS PR00906 SecA protein signature 170 190 5.1E-69 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 PRINTS PR00906 SecA protein signature 381 398 5.1E-69 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 PRINTS PR00906 SecA protein signature 418 431 5.1E-69 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 SUPERFAMILY SSF52540 422 629 4.11E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Pfam PF01043 SecA preprotein cross-linking domain 236 363 1.7E-32 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 SMART SM00957 6 407 2.6E-251 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 SUPERFAMILY SSF81886 631 916 9.16E-67 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Gene3D G3DSA:3.90.1440.10 229 373 3.7E-161 T 13-10-2018 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Gene3D G3DSA:1.10.3060.10 632 842 1.8E-61 T 13-10-2018 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 SUPERFAMILY SSF52540 5 420 9.63E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 841 19.386 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Pfam PF07517 SecA DEAD-like domain 7 406 2.5E-120 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 827 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Gene3D G3DSA:3.10.450.50 889 926 1.2E-7 T 13-10-2018 TREPR_2352 ceef0bb05312fc271e84ec43718be871 926 Gene3D G3DSA:3.40.50.300 24 420 3.7E-161 T 13-10-2018 TREPR_2377 7b947a284edf558dee7dfd796ace219b 284 Gene3D G3DSA:3.40.50.720 1 282 3.9E-33 T 13-10-2018 TREPR_2377 7b947a284edf558dee7dfd796ace219b 284 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 208 1.7E-26 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TREPR_2377 7b947a284edf558dee7dfd796ace219b 284 SUPERFAMILY SSF51735 1 261 1.91E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3080 6198fd1884b7dcee46d86036090cd43d 350 Gene3D G3DSA:3.30.1330.10 6 166 6.8E-43 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TREPR_3080 6198fd1884b7dcee46d86036090cd43d 350 Hamap MF_00625 Selenide, water dikinase [selD]. 10 350 36.847 T 13-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 TREPR_3080 6198fd1884b7dcee46d86036090cd43d 350 Gene3D G3DSA:3.90.650.10 167 349 3.9E-50 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TREPR_3080 6198fd1884b7dcee46d86036090cd43d 350 SUPERFAMILY SSF55326 14 163 1.24E-35 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TREPR_3080 6198fd1884b7dcee46d86036090cd43d 350 TIGRFAM TIGR00476 selD: selenide, water dikinase 15 317 3.5E-112 T 13-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 TREPR_3080 6198fd1884b7dcee46d86036090cd43d 350 PIRSF PIRSF036407 8 350 1.1E-108 T 13-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 TREPR_3080 6198fd1884b7dcee46d86036090cd43d 350 Pfam PF00586 AIR synthase related protein, N-terminal domain 54 160 2.0E-17 T 13-10-2018 IPR016188 PurM-like, N-terminal domain TREPR_3080 6198fd1884b7dcee46d86036090cd43d 350 Pfam PF02769 AIR synthase related protein, C-terminal domain 172 346 1.8E-26 T 13-10-2018 IPR010918 PurM-like, C-terminal domain TREPR_3080 6198fd1884b7dcee46d86036090cd43d 350 SUPERFAMILY SSF56042 166 347 1.79E-43 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TREPR_2928 c3a0a6950889bb8e8530cbff5db3a02d 633 Gene3D G3DSA:1.10.287.950 338 583 8.3E-46 T 13-10-2018 TREPR_2928 c3a0a6950889bb8e8530cbff5db3a02d 633 SUPERFAMILY SSF58104 268 584 4.8E-45 T 13-10-2018 TREPR_2928 c3a0a6950889bb8e8530cbff5db3a02d 633 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 571 4.9E-27 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_2928 c3a0a6950889bb8e8530cbff5db3a02d 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 393 4.4E-26 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_2928 c3a0a6950889bb8e8530cbff5db3a02d 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 470 499 4.4E-26 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_2928 c3a0a6950889bb8e8530cbff5db3a02d 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 107 132 4.4E-26 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_2928 c3a0a6950889bb8e8530cbff5db3a02d 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 518 547 4.4E-26 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_2928 c3a0a6950889bb8e8530cbff5db3a02d 633 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 468 4.4E-26 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_2928 c3a0a6950889bb8e8530cbff5db3a02d 633 SMART SM00283 343 590 3.6E-48 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_2952 4838f477b65759710f24d9df45b1d864 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site TREPR_2952 4838f477b65759710f24d9df45b1d864 476 Gene3D G3DSA:3.20.20.80 1 475 2.0E-149 T 13-10-2018 TREPR_2952 4838f477b65759710f24d9df45b1d864 476 Pfam PF00232 Glycosyl hydrolase family 1 2 473 9.5E-135 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_2952 4838f477b65759710f24d9df45b1d864 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 303 317 1.4E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_2952 4838f477b65759710f24d9df45b1d864 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 1.4E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_2952 4838f477b65759710f24d9df45b1d864 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 1.4E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_2952 4838f477b65759710f24d9df45b1d864 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 1.4E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_2952 4838f477b65759710f24d9df45b1d864 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 1.4E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_2952 4838f477b65759710f24d9df45b1d864 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site TREPR_2952 4838f477b65759710f24d9df45b1d864 476 SUPERFAMILY SSF51445 2 473 5.15E-156 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.4E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 250 3.9E-60 T 13-10-2018 TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 SUPERFAMILY SSF51735 11 252 2.43E-75 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 8.6E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 8.6E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 8.6E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 Gene3D G3DSA:3.40.50.720 2 254 2.3E-77 T 13-10-2018 TREPR_0133 24b890c50edb4fcfa321350be2bf94c0 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 SMART SM00382 112 313 3.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 SUPERFAMILY SSF52540 61 404 8.37E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 Gene3D G3DSA:1.10.8.60 315 417 1.1E-35 T 13-10-2018 TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 13 410 3.1E-184 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 Gene3D G3DSA:3.40.50.300 58 314 6.7E-106 T 13-10-2018 TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 SMART SM00994 12 52 8.3E-18 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 309 1.3E-46 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 Gene3D G3DSA:3.30.50.30 5 52 3.7E-16 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 SUPERFAMILY SSF57716 13 49 3.85E-8 T 13-10-2018 TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 414 50.238 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 SMART SM01086 316 410 5.8E-28 T 13-10-2018 IPR019489 Clp ATPase, C-terminal TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 Pfam PF06689 ClpX C4-type zinc finger 14 50 7.1E-18 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TREPR_2600 1bc6ade242dc97f5597d1aa8686b8b5a 417 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 316 390 2.2E-15 T 13-10-2018 IPR019489 Clp ATPase, C-terminal TREPR_1037 b1b7270f0003b5d777391ae9da377c8a 263 Gene3D G3DSA:2.50.20.10 26 259 1.0E-65 T 13-10-2018 TREPR_1037 b1b7270f0003b5d777391ae9da377c8a 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 76 259 9.8E-58 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 Gene3D G3DSA:1.10.1520.10 45 196 1.8E-37 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 SMART SM00358 205 272 5.8E-21 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 Hamap MF_00104 Ribonuclease 3 [rnc]. 53 268 28.427 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 SMART SM00535 65 198 3.3E-40 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 SUPERFAMILY SSF69065 46 206 5.06E-42 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 Gene3D G3DSA:3.30.160.20 204 270 1.9E-21 T 13-10-2018 TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 SUPERFAMILY SSF54768 159 274 2.67E-26 T 13-10-2018 TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 54 270 8.3E-71 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 Pfam PF00035 Double-stranded RNA binding motif 205 270 4.6E-13 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 ProSitePatterns PS00517 Ribonuclease III family signature. 87 95 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TREPR_2689 53b646d4e61b49f69f263c91d350ad31 283 Pfam PF14622 Ribonuclease-III-like 65 189 1.5E-29 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TREPR_1379 e522607a7d1ee9278a07fcb966a8ea4d 610 SUPERFAMILY SSF52540 364 606 2.83E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1379 e522607a7d1ee9278a07fcb966a8ea4d 610 Gene3D G3DSA:3.40.50.300 366 609 1.0E-85 T 13-10-2018 TREPR_1379 e522607a7d1ee9278a07fcb966a8ea4d 610 SUPERFAMILY SSF90123 26 355 8.63E-85 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_1379 e522607a7d1ee9278a07fcb966a8ea4d 610 Pfam PF00005 ABC transporter 388 535 9.2E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1379 e522607a7d1ee9278a07fcb966a8ea4d 610 Pfam PF00664 ABC transporter transmembrane region 44 323 2.7E-55 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TREPR_1379 e522607a7d1ee9278a07fcb966a8ea4d 610 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1379 e522607a7d1ee9278a07fcb966a8ea4d 610 SMART SM00382 395 581 1.2E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1379 e522607a7d1ee9278a07fcb966a8ea4d 610 Gene3D G3DSA:1.20.1560.10 11 356 1.3E-100 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_0774 351fe097fe1f9f310fdec3bca8264962 101 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 82 7.1E-6 T 13-10-2018 IPR009241 Toxin HigB-like TREPR_0774 351fe097fe1f9f310fdec3bca8264962 101 PIRSF PIRSF028744 1 101 2.4E-37 T 13-10-2018 IPR014056 Addiction module killer protein, predicted TREPR_0774 351fe097fe1f9f310fdec3bca8264962 101 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 95 1.4E-36 T 13-10-2018 IPR014056 Addiction module killer protein, predicted TREPR_1366 29caab2815f2e75feb466084513add52 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 4.7E-23 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_1366 29caab2815f2e75feb466084513add52 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 54 73 4.7E-23 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_1366 29caab2815f2e75feb466084513add52 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 277 300 4.7E-23 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_1366 29caab2815f2e75feb466084513add52 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 4.7E-23 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_1366 29caab2815f2e75feb466084513add52 315 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 8 313 74.975 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 TREPR_1366 29caab2815f2e75feb466084513add52 315 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 54 61 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_1366 29caab2815f2e75feb466084513add52 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 125 139 2.7E-29 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TREPR_1366 29caab2815f2e75feb466084513add52 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 291 302 2.7E-29 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TREPR_1366 29caab2815f2e75feb466084513add52 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 52 66 2.7E-29 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TREPR_1366 29caab2815f2e75feb466084513add52 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 85 98 2.7E-29 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TREPR_1366 29caab2815f2e75feb466084513add52 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 2.7E-29 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TREPR_1366 29caab2815f2e75feb466084513add52 315 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 9 312 8.1E-123 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TREPR_1366 29caab2815f2e75feb466084513add52 315 Gene3D G3DSA:3.40.50.1370 9 138 3.1E-112 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TREPR_1366 29caab2815f2e75feb466084513add52 315 Gene3D G3DSA:3.40.50.1370 139 308 3.1E-112 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TREPR_1366 29caab2815f2e75feb466084513add52 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 9 149 1.9E-45 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TREPR_1366 29caab2815f2e75feb466084513add52 315 SUPERFAMILY SSF53671 5 313 1.13E-92 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TREPR_1366 29caab2815f2e75feb466084513add52 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 309 4.0E-52 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TREPR_0215 fa88426c87b631088840ef278afb8368 292 Gene3D G3DSA:3.10.450.620 19 116 2.5E-6 T 13-10-2018 TREPR_0215 fa88426c87b631088840ef278afb8368 292 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 35 268 2.4E-26 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system TREPR_0321 fa88426c87b631088840ef278afb8368 292 Gene3D G3DSA:3.10.450.620 19 116 2.5E-6 T 13-10-2018 TREPR_0321 fa88426c87b631088840ef278afb8368 292 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 35 268 2.4E-26 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system TREPR_3523 8fb43249fe5949eafbaab8d20ed38a5d 409 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 407 1.4E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3523 8fb43249fe5949eafbaab8d20ed38a5d 409 SUPERFAMILY SSF55874 262 406 6.55E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3523 8fb43249fe5949eafbaab8d20ed38a5d 409 Gene3D G3DSA:3.30.565.10 259 407 1.7E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3523 8fb43249fe5949eafbaab8d20ed38a5d 409 Pfam PF07730 Histidine kinase 192 255 8.5E-12 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 TREPR_3523 8fb43249fe5949eafbaab8d20ed38a5d 409 SMART SM00387 297 409 8.3E-5 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0526 d98ffc1f8a8a03924b9e6664468acb57 497 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 189 3.4E-10 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_0526 d98ffc1f8a8a03924b9e6664468acb57 497 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 291 473 3.9E-22 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TREPR_0526 d98ffc1f8a8a03924b9e6664468acb57 497 Gene3D G3DSA:3.40.50.300 2 197 4.0E-18 T 13-10-2018 TREPR_0526 d98ffc1f8a8a03924b9e6664468acb57 497 SUPERFAMILY SSF52317 287 484 3.11E-28 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0526 d98ffc1f8a8a03924b9e6664468acb57 497 SUPERFAMILY SSF52540 1 202 2.28E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0526 d98ffc1f8a8a03924b9e6664468acb57 497 Gene3D G3DSA:3.40.50.880 301 494 9.4E-8 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_3297 73dee4b910347030beec2179c172091f 878 Gene3D G3DSA:3.40.50.1970 459 653 1.3E-55 T 13-10-2018 TREPR_3297 73dee4b910347030beec2179c172091f 878 Pfam PF00465 Iron-containing alcohol dehydrogenase 466 860 3.7E-113 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 TREPR_3297 73dee4b910347030beec2179c172091f 878 Gene3D G3DSA:3.40.605.10 23 454 1.1E-174 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TREPR_3297 73dee4b910347030beec2179c172091f 878 SUPERFAMILY SSF53720 18 462 5.76E-79 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TREPR_3297 73dee4b910347030beec2179c172091f 878 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 730 750 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 TREPR_3297 73dee4b910347030beec2179c172091f 878 Pfam PF00171 Aldehyde dehydrogenase family 18 409 5.1E-24 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TREPR_3297 73dee4b910347030beec2179c172091f 878 SUPERFAMILY SSF56796 457 873 1.7E-120 T 13-10-2018 TREPR_3297 73dee4b910347030beec2179c172091f 878 Gene3D G3DSA:3.40.309.10 227 413 1.1E-174 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TREPR_3297 73dee4b910347030beec2179c172091f 878 Gene3D G3DSA:1.20.1090.10 655 873 4.4E-66 T 13-10-2018 TREPR_3297 73dee4b910347030beec2179c172091f 878 PIRSF PIRSF000111 3 874 0.0 T 13-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 TREPR_2576 fb953f31bf927d9fa859ef6a2b9afc23 154 SUPERFAMILY SSF89447 4 137 7.48E-31 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily TREPR_2576 fb953f31bf927d9fa859ef6a2b9afc23 154 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 5 131 6.0E-24 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TREPR_2576 fb953f31bf927d9fa859ef6a2b9afc23 154 Pfam PF02381 MraZ protein, putative antitoxin-like 5 63 7.7E-9 T 13-10-2018 IPR020603 MraZ domain TREPR_2576 fb953f31bf927d9fa859ef6a2b9afc23 154 Pfam PF02381 MraZ protein, putative antitoxin-like 80 136 4.0E-13 T 13-10-2018 IPR020603 MraZ domain TREPR_2576 fb953f31bf927d9fa859ef6a2b9afc23 154 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 154 31.973 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TREPR_2576 fb953f31bf927d9fa859ef6a2b9afc23 154 Gene3D G3DSA:2.40.330.20 3 144 2.6E-31 T 13-10-2018 IPR038619 MraZ superfamily TREPR_2956 c9b6b3f37984c31f3bfc426b49188fb7 294 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 287 3.8E-34 T 13-10-2018 TREPR_2956 c9b6b3f37984c31f3bfc426b49188fb7 294 ProSitePatterns PS01229 Hypothetical cof family signature 2. 242 264 - T 13-10-2018 TREPR_2956 c9b6b3f37984c31f3bfc426b49188fb7 294 Gene3D G3DSA:3.30.1240.10 95 217 3.5E-43 T 13-10-2018 TREPR_2956 c9b6b3f37984c31f3bfc426b49188fb7 294 SUPERFAMILY SSF56784 4 292 5.83E-42 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_2956 c9b6b3f37984c31f3bfc426b49188fb7 294 Gene3D G3DSA:3.40.50.1000 4 287 3.5E-43 T 13-10-2018 IPR023214 HAD superfamily TREPR_3790 764be1c704244643fb34d7f6be9bbfdb 391 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 13 156 2.2E-31 T 13-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal TREPR_3790 764be1c704244643fb34d7f6be9bbfdb 391 Gene3D G3DSA:3.40.1710.10 49 179 5.0E-8 T 13-10-2018 TREPR_3790 764be1c704244643fb34d7f6be9bbfdb 391 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 167 368 6.7E-46 T 13-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal TREPR_3790 764be1c704244643fb34d7f6be9bbfdb 391 Pfam PF12698 ABC-2 family transporter protein 24 358 4.0E-25 T 13-10-2018 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 501 650 7.8E-29 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 457 486 4.4E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 611 640 4.4E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 534 561 4.4E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 563 592 4.4E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 Gene3D G3DSA:1.10.287.950 419 672 1.6E-48 T 13-10-2018 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 Pfam PF00672 HAMP domain 340 389 9.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 Gene3D G3DSA:3.30.450.20 50 306 2.7E-30 T 13-10-2018 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 SMART SM00283 436 683 1.6E-52 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 SMART SM00304 339 393 6.5E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 SUPERFAMILY SSF58104 361 688 2.49E-49 T 13-10-2018 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 Gene3D G3DSA:3.30.450.20 59 201 2.7E-30 T 13-10-2018 TREPR_0493 4ddb35d9f1c49159075df223e98056a1 727 Gene3D G3DSA:1.20.1480.50 307 399 2.5E-11 T 13-10-2018 TREPR_2985 2093e40d6ac686dc002a6861d756b4fa 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 TREPR_2985 2093e40d6ac686dc002a6861d756b4fa 382 Pfam PF13378 Enolase C-terminal domain-like 129 355 1.2E-62 T 13-10-2018 IPR029065 Enolase C-terminal domain-like TREPR_2985 2093e40d6ac686dc002a6861d756b4fa 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 107 2.1E-23 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain TREPR_2985 2093e40d6ac686dc002a6861d756b4fa 382 SMART SM00922 125 230 5.4E-18 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal TREPR_2985 2093e40d6ac686dc002a6861d756b4fa 382 Gene3D G3DSA:3.20.20.120 102 344 1.4E-147 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TREPR_2985 2093e40d6ac686dc002a6861d756b4fa 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 TREPR_2985 2093e40d6ac686dc002a6861d756b4fa 382 SUPERFAMILY SSF54826 1 112 4.0E-31 T 13-10-2018 TREPR_2985 2093e40d6ac686dc002a6861d756b4fa 382 SUPERFAMILY SSF51604 95 359 1.44E-79 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TREPR_2985 2093e40d6ac686dc002a6861d756b4fa 382 Gene3D G3DSA:3.30.390.10 11 364 1.4E-147 T 13-10-2018 IPR029017 Enolase-like, N-terminal TREPR_1556 e53e141650914f920e75aa020f98af5b 266 Gene3D G3DSA:3.20.20.20 1 266 2.4E-87 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_1556 e53e141650914f920e75aa020f98af5b 266 SUPERFAMILY SSF51717 1 259 1.57E-72 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_1556 e53e141650914f920e75aa020f98af5b 266 Pfam PF00809 Pterin binding enzyme 8 226 2.5E-23 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3138 914b4ffaf6a144fd3bcf87f4094e5a25 247 Gene3D G3DSA:3.30.70.1070 162 236 1.7E-11 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TREPR_3138 914b4ffaf6a144fd3bcf87f4094e5a25 247 SUPERFAMILY SSF110997 167 243 3.92E-14 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TREPR_3138 914b4ffaf6a144fd3bcf87f4094e5a25 247 Pfam PF05036 Sporulation related domain 167 236 2.5E-14 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 TREPR_0336 bc7808323a97639673058fb96438d735 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 175 1.6E-17 T 13-10-2018 TREPR_0336 bc7808323a97639673058fb96438d735 206 Gene3D G3DSA:1.10.150.240 15 81 3.4E-29 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TREPR_0336 bc7808323a97639673058fb96438d735 206 Gene3D G3DSA:3.40.50.1000 4 196 3.4E-29 T 13-10-2018 IPR023214 HAD superfamily TREPR_0336 bc7808323a97639673058fb96438d735 206 SUPERFAMILY SSF56784 4 204 3.45E-29 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1187 1208 74.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1079 1100 280.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1294 1319 2300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1162 1182 4200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1230 1267 6500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1435 1456 570.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1105 1126 580.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1459 1512 510.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1409 1429 5100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 726 747 2200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 817 838 6200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1272 1292 7200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1546 1569 300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 640 660 7600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1327 1351 750.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1517 1538 1700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 607 632 990.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 1601 1637 6400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SMART SM00710 694 714 7100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 Gene3D G3DSA:2.160.20.20 964 1295 2.5E-8 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SUPERFAMILY SSF51126 1437 1621 3.64E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SUPERFAMILY SSF51126 1129 1330 3.14E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_2786 b1500c2a5c25026f98a140bf9378bc47 1667 SUPERFAMILY SSF51126 930 1178 3.06E-6 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_3669 fd4234182b921dc022547c36603517fc 479 SMART SM00876 282 390 5.1E-26 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TREPR_3669 fd4234182b921dc022547c36603517fc 479 SUPERFAMILY SSF102114 61 357 6.8E-42 T 13-10-2018 TREPR_3669 fd4234182b921dc022547c36603517fc 479 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 282 388 5.0E-22 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TREPR_3669 fd4234182b921dc022547c36603517fc 479 TIGRFAM TIGR03955 rSAM_HydG: [FeFe] hydrogenase H-cluster radical SAM maturase HydG 16 479 2.4E-190 T 13-10-2018 IPR024007 [FeFe]-hydrogenase maturation HydG, radical SAM TREPR_3669 fd4234182b921dc022547c36603517fc 479 Gene3D G3DSA:3.20.20.70 27 402 1.4E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 Pfam PF14559 Tetratricopeptide repeat 16 70 4.1E-7 T 13-10-2018 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 Pfam PF13181 Tetratricopeptide repeat 73 99 0.037 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 SUPERFAMILY SSF48452 4 173 2.4E-37 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 Gene3D G3DSA:1.25.40.10 71 172 2.9E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 SMART SM00028 106 139 7.6E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 SMART SM00028 72 105 0.0031 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 SMART SM00028 38 71 4.2E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 SMART SM00028 4 37 5.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 Pfam PF00515 Tetratricopeptide repeat 106 137 3.0E-8 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_2762 665003b2b0ae39b69a40b0252f787795 183 Gene3D G3DSA:1.25.40.10 2 70 2.7E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2982 e189feaf4b2d708da02e0d2ba6963113 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.6E-44 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 TREPR_2982 e189feaf4b2d708da02e0d2ba6963113 130 SUPERFAMILY SSF54211 7 130 4.17E-45 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2982 e189feaf4b2d708da02e0d2ba6963113 130 Gene3D G3DSA:3.30.230.10 5 130 4.7E-48 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_2982 e189feaf4b2d708da02e0d2ba6963113 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 30.862 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid TREPR_2982 e189feaf4b2d708da02e0d2ba6963113 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 TREPR_0263 b037b8745a9cd54f82b221ad8bbbc664 508 SUPERFAMILY SSF82689 392 484 5.62E-11 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TREPR_0263 b037b8745a9cd54f82b221ad8bbbc664 508 Gene3D G3DSA:3.30.70.100 391 478 1.7E-7 T 13-10-2018 TREPR_0263 b037b8745a9cd54f82b221ad8bbbc664 508 Pfam PF00924 Mechanosensitive ion channel 271 473 5.4E-35 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TREPR_0263 b037b8745a9cd54f82b221ad8bbbc664 508 SUPERFAMILY SSF50182 316 379 2.16E-14 T 13-10-2018 IPR010920 LSM domain superfamily TREPR_0263 b037b8745a9cd54f82b221ad8bbbc664 508 Gene3D G3DSA:2.30.30.60 330 379 3.0E-8 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TREPR_1786 a81e8447eeecdde5b33c944654f0a559 320 SMART SM00382 40 232 1.2E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1786 a81e8447eeecdde5b33c944654f0a559 320 Pfam PF00005 ABC transporter 31 182 1.2E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1786 a81e8447eeecdde5b33c944654f0a559 320 SUPERFAMILY SSF52540 4 254 1.69E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1786 a81e8447eeecdde5b33c944654f0a559 320 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1786 a81e8447eeecdde5b33c944654f0a559 320 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 318 7.3E-27 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1786 a81e8447eeecdde5b33c944654f0a559 320 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 299 1.8E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1786 a81e8447eeecdde5b33c944654f0a559 320 Gene3D G3DSA:3.40.50.300 2 320 1.2E-95 T 13-10-2018 TREPR_3375 4e40b728572c10461b5bca457bef3d47 315 SUPERFAMILY SSF50249 243 313 5.88E-9 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_3375 4e40b728572c10461b5bca457bef3d47 315 Pfam PF00313 'Cold-shock' DNA-binding domain 246 302 2.0E-9 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TREPR_3375 4e40b728572c10461b5bca457bef3d47 315 Pfam PF01936 NYN domain 11 191 7.1E-18 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type TREPR_3375 4e40b728572c10461b5bca457bef3d47 315 Gene3D G3DSA:2.40.50.140 242 315 5.3E-12 T 13-10-2018 TREPR_3375 4e40b728572c10461b5bca457bef3d47 315 Gene3D G3DSA:3.40.50.1010 60 175 1.8E-10 T 13-10-2018 TREPR_1372 1854c72879d1e68d48a7ce4bd9c16248 354 Pfam PF13378 Enolase C-terminal domain-like 146 352 6.9E-54 T 13-10-2018 IPR029065 Enolase C-terminal domain-like TREPR_1372 1854c72879d1e68d48a7ce4bd9c16248 354 SUPERFAMILY SSF51604 111 353 8.52E-70 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TREPR_1372 1854c72879d1e68d48a7ce4bd9c16248 354 Gene3D G3DSA:3.30.390.10 6 114 4.5E-118 T 13-10-2018 IPR029017 Enolase-like, N-terminal TREPR_1372 1854c72879d1e68d48a7ce4bd9c16248 354 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 123 5.2E-17 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain TREPR_1372 1854c72879d1e68d48a7ce4bd9c16248 354 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 186 217 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 TREPR_1372 1854c72879d1e68d48a7ce4bd9c16248 354 SUPERFAMILY SSF54826 1 124 2.61E-30 T 13-10-2018 TREPR_1372 1854c72879d1e68d48a7ce4bd9c16248 354 SMART SM00922 140 236 6.0E-30 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal TREPR_1372 1854c72879d1e68d48a7ce4bd9c16248 354 Gene3D G3DSA:3.20.20.120 115 351 4.5E-118 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 PIRSF PIRSF005419 10 295 5.1E-69 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 PIRSF PIRSF005419 282 670 1.4E-93 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 Gene3D G3DSA:3.40.30.60 329 472 3.3E-50 T 13-10-2018 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 Gene3D G3DSA:1.10.490.80 566 664 1.3E-10 T 13-10-2018 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 Pfam PF00771 FHIPEP family 286 655 3.0E-95 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 Pfam PF00771 FHIPEP family 29 281 4.8E-74 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 188 205 1.1E-23 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 1.1E-23 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 139 155 1.1E-23 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 176 1.1E-23 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 1.1E-23 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 239 253 1.1E-23 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TREPR_3866 77710d566556d533cb245d4f16c2b3aa 677 Gene3D G3DSA:1.10.8.540 473 564 1.6E-31 T 13-10-2018 TREPR_2341 775b415c0822307d6f57bfb805c87a21 181 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 10 177 1.2E-41 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TREPR_2341 775b415c0822307d6f57bfb805c87a21 181 Gene3D G3DSA:1.10.10.10 2 85 6.7E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2341 775b415c0822307d6f57bfb805c87a21 181 PIRSF PIRSF019345 1 178 5.8E-49 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TREPR_2341 775b415c0822307d6f57bfb805c87a21 181 Pfam PF04079 Segregation and condensation complex subunit ScpB 11 169 2.2E-51 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TREPR_2341 775b415c0822307d6f57bfb805c87a21 181 SUPERFAMILY SSF46785 87 160 3.2E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2341 775b415c0822307d6f57bfb805c87a21 181 Gene3D G3DSA:1.10.10.10 86 178 3.4E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2341 775b415c0822307d6f57bfb805c87a21 181 SUPERFAMILY SSF46785 7 79 4.44E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1486 c656a704660e5d41abfb298d2b098289 102 PRINTS PR00973 Ribosomal protein S17 family signature 85 92 2.3E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1486 c656a704660e5d41abfb298d2b098289 102 PRINTS PR00973 Ribosomal protein S17 family signature 75 85 2.3E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1486 c656a704660e5d41abfb298d2b098289 102 PRINTS PR00973 Ribosomal protein S17 family signature 43 66 2.3E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1486 c656a704660e5d41abfb298d2b098289 102 SUPERFAMILY SSF50249 24 101 5.14E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1486 c656a704660e5d41abfb298d2b098289 102 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 24 99 23.516 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1486 c656a704660e5d41abfb298d2b098289 102 ProSitePatterns PS00056 Ribosomal protein S17 signature. 75 87 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1486 c656a704660e5d41abfb298d2b098289 102 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 24 94 3.0E-20 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1486 c656a704660e5d41abfb298d2b098289 102 Pfam PF00366 Ribosomal protein S17 29 94 6.2E-30 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1486 c656a704660e5d41abfb298d2b098289 102 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 24 94 2.4E-32 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1486 c656a704660e5d41abfb298d2b098289 102 Gene3D G3DSA:2.40.50.140 23 102 6.8E-33 T 13-10-2018 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 Gene3D G3DSA:3.40.50.12740 679 810 2.8E-39 T 13-10-2018 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 SMART SM00387 402 524 4.5E-41 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 Pfam PF00072 Response regulator receiver domain 544 651 1.4E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 Pfam PF00072 Response regulator receiver domain 682 798 4.6E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 463 2.4E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 477 2.4E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 502 2.4E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 521 2.4E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 SMART SM00388 290 355 6.1E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 SMART SM00448 680 798 2.2E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 SMART SM00448 542 655 5.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 SUPERFAMILY SSF52172 540 661 2.42E-26 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 SUPERFAMILY SSF52172 677 802 3.84E-35 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 SUPERFAMILY SSF55874 344 521 1.7E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 Gene3D G3DSA:3.30.565.10 355 526 5.8E-52 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 522 2.4E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 SUPERFAMILY SSF47384 276 356 1.37E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 354 1.7E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 Gene3D G3DSA:3.40.50.2300 537 651 1.4E-27 T 13-10-2018 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 Pfam PF11845 Protein of unknown function (DUF3365) 27 208 1.0E-22 T 13-10-2018 IPR021796 Protein of unknown function DUF3365 TREPR_3194 6e2daa0e7a1a067e62325277d6c3f495 811 Gene3D G3DSA:1.10.287.130 255 353 2.1E-25 T 13-10-2018 TREPR_1685 21a2740c642a478145a535fb20419083 373 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 TIGRFAM TIGR00492 alr: alanine racemase 4 368 2.6E-107 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 Gene3D G3DSA:2.40.37.10 231 372 2.1E-53 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TREPR_1685 21a2740c642a478145a535fb20419083 373 Pfam PF00842 Alanine racemase, C-terminal domain 241 366 9.9E-46 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 PRINTS PR00992 Alanine racemase signature 156 167 3.0E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 PRINTS PR00992 Alanine racemase signature 122 134 3.0E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 PRINTS PR00992 Alanine racemase signature 63 81 3.0E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 PRINTS PR00992 Alanine racemase signature 27 43 3.0E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 PRINTS PR00992 Alanine racemase signature 202 229 3.0E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 PRINTS PR00992 Alanine racemase signature 349 362 3.0E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 PRINTS PR00992 Alanine racemase signature 257 272 3.0E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 PRINTS PR00992 Alanine racemase signature 274 289 3.0E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 Gene3D G3DSA:3.20.20.10 11 230 1.8E-71 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_1685 21a2740c642a478145a535fb20419083 373 Hamap MF_01201 Alanine racemase. 1 367 33.371 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 SUPERFAMILY SSF50621 236 368 3.14E-47 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TREPR_1685 21a2740c642a478145a535fb20419083 373 SUPERFAMILY SSF51419 8 242 1.35E-63 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_1685 21a2740c642a478145a535fb20419083 373 SMART SM01005 241 367 8.8E-66 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1685 21a2740c642a478145a535fb20419083 373 Pfam PF01168 Alanine racemase, N-terminal domain 8 229 1.1E-65 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 SMART SM00388 140 206 5.6E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 Pfam PF00512 His Kinase A (phospho-acceptor) domain 140 205 9.3E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 SUPERFAMILY SSF55874 196 359 2.23E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 SUPERFAMILY SSF158472 86 136 3.01E-6 T 13-10-2018 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 358 3.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 3.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 316 3.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 3.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 SMART SM00304 83 139 2.0E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 SMART SM00387 250 361 1.6E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 Gene3D G3DSA:1.10.287.130 85 201 3.8E-25 T 13-10-2018 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 SUPERFAMILY SSF47384 123 207 8.83E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 251 358 7.1E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2705 1d422fa2da9b82f16884975af74c2e34 363 Gene3D G3DSA:3.30.565.10 213 362 1.2E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.0E-57 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 2.0E-57 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 2.0E-57 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 255 2.0E-57 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 285 2.0E-57 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.0E-57 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 2.0E-57 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.0E-57 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 2.0E-57 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 293 5.1E-46 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-33 T 13-10-2018 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.0E-33 T 13-10-2018 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 1.0E-33 T 13-10-2018 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.0E-33 T 13-10-2018 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.0E-33 T 13-10-2018 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 SUPERFAMILY SSF51905 3 304 5.34E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 Gene3D G3DSA:3.50.50.60 118 240 3.0E-103 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 Gene3D G3DSA:3.50.50.60 9 297 3.0E-103 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 TREPR_3858 194391d0974df0278b7644d9795eeb8a 308 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 304 4.4E-106 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 TREPR_0534 a2196d8270851a1d68e32c2c28c215fd 484 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 444 9.0E-126 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TREPR_0534 a2196d8270851a1d68e32c2c28c215fd 484 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 185.213 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TREPR_0534 a2196d8270851a1d68e32c2c28c215fd 484 SUPERFAMILY SSF52540 1 235 7.53E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0534 a2196d8270851a1d68e32c2c28c215fd 484 Gene3D G3DSA:3.40.50.300 2 240 1.2E-50 T 13-10-2018 TREPR_0534 a2196d8270851a1d68e32c2c28c215fd 484 Gene3D G3DSA:3.40.50.880 259 428 6.6E-14 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0534 a2196d8270851a1d68e32c2c28c215fd 484 SUPERFAMILY SSF52317 250 441 4.59E-34 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0534 a2196d8270851a1d68e32c2c28c215fd 484 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 235 4.4E-20 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_0534 a2196d8270851a1d68e32c2c28c215fd 484 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 249 433 8.5E-55 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TREPR_3389 58300e538e4387c245e4721bf9b63db5 361 Gene3D G3DSA:3.20.10.10 190 360 1.4E-56 T 13-10-2018 TREPR_3389 58300e538e4387c245e4721bf9b63db5 361 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 65 359 6.2E-79 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 TREPR_3389 58300e538e4387c245e4721bf9b63db5 361 Gene3D G3DSA:3.30.470.10 54 189 1.4E-33 T 13-10-2018 TREPR_3389 58300e538e4387c245e4721bf9b63db5 361 Pfam PF01063 Amino-transferase class IV 70 316 2.7E-32 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TREPR_3389 58300e538e4387c245e4721bf9b63db5 361 SUPERFAMILY SSF56752 59 357 8.37E-77 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TREPR_3389 58300e538e4387c245e4721bf9b63db5 361 PIRSF PIRSF006468 54 361 1.2E-77 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 TREPR_3389 58300e538e4387c245e4721bf9b63db5 361 ProSitePatterns PS00770 Aminotransferases class-IV signature. 241 271 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 TREPR_3406 af2750dfffd4ea78893a3235e70e64dc 859 SMART SM00421 789 846 4.4E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3406 af2750dfffd4ea78893a3235e70e64dc 859 Gene3D G3DSA:1.10.10.10 788 852 3.7E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3406 af2750dfffd4ea78893a3235e70e64dc 859 Gene3D G3DSA:1.25.40.10 508 765 7.0E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3406 af2750dfffd4ea78893a3235e70e64dc 859 SUPERFAMILY SSF52540 27 227 2.71E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3406 af2750dfffd4ea78893a3235e70e64dc 859 Pfam PF00196 Bacterial regulatory proteins, luxR family 791 846 1.3E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3406 af2750dfffd4ea78893a3235e70e64dc 859 SUPERFAMILY SSF46894 785 852 4.08E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_1532 742f3494903e8e26980875f2922fa20c 366 SUPERFAMILY SSF161098 137 345 5.89E-11 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1532 742f3494903e8e26980875f2922fa20c 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 363 3.1E-30 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1532 742f3494903e8e26980875f2922fa20c 366 Gene3D G3DSA:1.10.3720.10 130 357 1.1E-13 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1978 bbd1682698fc9428bdd342db7d0b3f5d 255 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 122 135 8.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1978 bbd1682698fc9428bdd342db7d0b3f5d 255 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 8.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1978 bbd1682698fc9428bdd342db7d0b3f5d 255 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 8.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1978 bbd1682698fc9428bdd342db7d0b3f5d 255 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 8.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1978 bbd1682698fc9428bdd342db7d0b3f5d 255 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 113 205 1.2E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1978 bbd1682698fc9428bdd342db7d0b3f5d 255 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 6.1E-24 T 13-10-2018 TREPR_1978 bbd1682698fc9428bdd342db7d0b3f5d 255 SUPERFAMILY SSF56784 1 246 1.65E-38 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_1978 bbd1682698fc9428bdd342db7d0b3f5d 255 Gene3D G3DSA:1.10.150.520 16 110 2.2E-36 T 13-10-2018 TREPR_1978 bbd1682698fc9428bdd342db7d0b3f5d 255 Gene3D G3DSA:3.40.50.1000 4 240 2.2E-36 T 13-10-2018 IPR023214 HAD superfamily TREPR_1337 3ff9c6f8b546505bed2345cf4d49113f 534 Gene3D G3DSA:3.40.50.1820 33 532 1.7E-111 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1337 3ff9c6f8b546505bed2345cf4d49113f 534 SUPERFAMILY SSF53474 38 517 7.51E-79 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1337 3ff9c6f8b546505bed2345cf4d49113f 534 Pfam PF00135 Carboxylesterase family 38 515 6.4E-71 T 13-10-2018 IPR002018 Carboxylesterase, type B TREPR_1337 3ff9c6f8b546505bed2345cf4d49113f 534 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 216 231 - T 13-10-2018 IPR019826 Carboxylesterase type B, active site TREPR_0010 4037164c54496677434830685cd20783 355 Pfam PF13692 Glycosyl transferases group 1 194 326 1.1E-18 T 13-10-2018 TREPR_0010 4037164c54496677434830685cd20783 355 SUPERFAMILY SSF53756 3 354 6.91E-26 T 13-10-2018 TREPR_0010 4037164c54496677434830685cd20783 355 Gene3D G3DSA:3.40.50.2000 3 180 3.5E-5 T 13-10-2018 TREPR_0010 4037164c54496677434830685cd20783 355 Gene3D G3DSA:3.40.50.2000 181 345 4.3E-12 T 13-10-2018 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 10 1155 12.081 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 14 904 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Pfam PF00562 RNA polymerase Rpb2, domain 6 679 1077 1.1E-155 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Pfam PF04563 RNA polymerase beta subunit 26 459 7.5E-27 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Gene3D G3DSA:3.90.1100.10 362 589 7.1E-73 T 13-10-2018 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 219 2.6E-5 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Pfam PF04561 RNA polymerase Rpb2, domain 2 318 415 1.1E-17 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Gene3D G3DSA:3.90.1110.10 156 244 1.6E-21 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 SUPERFAMILY SSF64484 17 1160 0.0 T 13-10-2018 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Gene3D G3DSA:2.40.50.150 794 938 5.6E-56 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Pfam PF04565 RNA polymerase Rpb2, domain 3 474 542 1.6E-29 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Pfam PF10385 RNA polymerase beta subunit external 1 domain 552 617 2.2E-22 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Gene3D G3DSA:3.90.1100.10 17 155 6.8E-48 T 13-10-2018 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Gene3D G3DSA:3.90.1100.10 608 674 3.2E-20 T 13-10-2018 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Pfam PF04560 RNA polymerase Rpb2, domain 7 1079 1153 1.1E-24 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Gene3D G3DSA:2.40.270.10 990 1055 1.0E-17 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Gene3D G3DSA:2.40.50.100 676 762 7.8E-25 T 13-10-2018 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 Gene3D G3DSA:3.90.1800.10 1065 1118 5.3E-10 T 13-10-2018 TREPR_0930 382f2af544aafc2dfbd0220253a64bdd 1177 ProSitePatterns PS01166 RNA polymerases beta chain signature. 930 942 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_3453 9443388c37033588b5a2a4a67c1d4115 406 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 298 398 1.6E-12 T 13-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain TREPR_3453 9443388c37033588b5a2a4a67c1d4115 406 Gene3D G3DSA:3.30.70.2390 299 373 4.2E-7 T 13-10-2018 TREPR_3453 9443388c37033588b5a2a4a67c1d4115 406 Gene3D G3DSA:1.10.260.150 61 298 1.4E-15 T 13-10-2018 TREPR_3453 9443388c37033588b5a2a4a67c1d4115 406 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 92 197 4.6E-6 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain TREPR_0825 aaf2a044d2fe6133661a1bfe2d8ff72b 348 Gene3D G3DSA:1.10.3720.10 88 306 9.8E-20 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0825 aaf2a044d2fe6133661a1bfe2d8ff72b 348 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 313 3.3E-35 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0825 aaf2a044d2fe6133661a1bfe2d8ff72b 348 SUPERFAMILY SSF161098 96 299 8.5E-16 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0250 38ddfbdd5871e130c464aceb0b6ce7aa 298 PIRSF PIRSF002936 232 298 7.1E-17 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 TREPR_0250 38ddfbdd5871e130c464aceb0b6ce7aa 298 PIRSF PIRSF002936 1 236 1.2E-89 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 TREPR_0250 38ddfbdd5871e130c464aceb0b6ce7aa 298 Gene3D G3DSA:3.40.50.620 8 232 9.8E-53 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_0250 38ddfbdd5871e130c464aceb0b6ce7aa 298 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 250 1.8E-40 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 TREPR_0250 38ddfbdd5871e130c464aceb0b6ce7aa 298 SUPERFAMILY SSF52402 7 230 1.14E-51 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 Gene3D G3DSA:3.50.50.60 118 242 6.1E-97 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 SUPERFAMILY SSF55424 322 442 1.37E-27 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 Gene3D G3DSA:3.30.390.30 326 444 4.4E-29 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 5.4E-15 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.4E-15 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 5.4E-15 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 5.4E-15 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 5.4E-15 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 Gene3D G3DSA:3.50.50.60 4 314 6.1E-97 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 306 2.6E-57 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 330 430 1.7E-9 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.1E-22 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 1.1E-22 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.1E-22 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.1E-22 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.1E-22 T 13-10-2018 TREPR_0711 7a387d791e1a32422022dbb37137d74f 444 SUPERFAMILY SSF51905 2 314 3.72E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_1530 1fbca3b455c0d3d904a27c80280b4937 327 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1530 1fbca3b455c0d3d904a27c80280b4937 327 SUPERFAMILY SSF52540 3 254 2.97E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1530 1fbca3b455c0d3d904a27c80280b4937 327 Pfam PF00005 ABC transporter 31 182 1.7E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1530 1fbca3b455c0d3d904a27c80280b4937 327 SMART SM00382 39 233 3.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1530 1fbca3b455c0d3d904a27c80280b4937 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 325 1.1E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1530 1fbca3b455c0d3d904a27c80280b4937 327 Gene3D G3DSA:3.40.50.300 1 327 6.4E-85 T 13-10-2018 TREPR_1530 1fbca3b455c0d3d904a27c80280b4937 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 305 2.5E-13 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1938 7a097bc683e4670c7cf7eb37ec4111c8 124 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 123 8.1E-20 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TREPR_1938 7a097bc683e4670c7cf7eb37ec4111c8 124 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 112 6.2E-17 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TREPR_1938 7a097bc683e4670c7cf7eb37ec4111c8 124 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 123 8.7E-26 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TREPR_1938 7a097bc683e4670c7cf7eb37ec4111c8 124 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 122 3.0E-19 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TREPR_1938 7a097bc683e4670c7cf7eb37ec4111c8 124 Gene3D G3DSA:3.90.470.20 2 123 5.0E-31 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TREPR_1938 7a097bc683e4670c7cf7eb37ec4111c8 124 SUPERFAMILY SSF56214 2 122 5.62E-27 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TREPR_1938 7a097bc683e4670c7cf7eb37ec4111c8 124 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 123 22.142 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 PRINTS PR00732 Glycosyl hydrolase family 4 signature 161 172 7.7E-29 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 PRINTS PR00732 Glycosyl hydrolase family 4 signature 72 88 7.7E-29 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 PRINTS PR00732 Glycosyl hydrolase family 4 signature 93 106 7.7E-29 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 PRINTS PR00732 Glycosyl hydrolase family 4 signature 107 127 7.7E-29 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 PRINTS PR00732 Glycosyl hydrolase family 4 signature 136 153 7.7E-29 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 7.7E-29 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 PRINTS PR00732 Glycosyl hydrolase family 4 signature 187 199 7.7E-29 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 SUPERFAMILY SSF51735 2 164 2.19E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 Pfam PF02056 Family 4 glycosyl hydrolase 3 179 7.0E-39 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 136 166 - T 13-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 191 429 4.1E-42 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 Gene3D G3DSA:3.90.110.10 165 453 7.3E-60 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 Gene3D G3DSA:3.40.50.720 1 162 8.3E-47 T 13-10-2018 TREPR_1512 4c7c23eb90408e331415d9839dfe6cb5 454 SUPERFAMILY SSF56327 165 447 6.04E-51 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TREPR_1878 1e97598f2154f59b47565b9688227055 558 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 342 476 3.3E-23 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_1878 1e97598f2154f59b47565b9688227055 558 SUPERFAMILY SSF52540 327 522 7.04E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1878 1e97598f2154f59b47565b9688227055 558 SMART SM00382 337 479 4.4E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1878 1e97598f2154f59b47565b9688227055 558 Gene3D G3DSA:3.40.50.300 276 492 2.7E-34 T 13-10-2018 TREPR_2217 46914476e04708644009f839ee7f5369 282 SUPERFAMILY SSF51556 4 277 1.01E-30 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_2217 46914476e04708644009f839ee7f5369 282 Pfam PF01026 TatD related DNase 4 277 4.3E-30 T 13-10-2018 IPR001130 TatD family GO:0016788 TREPR_2217 46914476e04708644009f839ee7f5369 282 PIRSF PIRSF005902 3 281 5.3E-30 T 13-10-2018 IPR001130 TatD family GO:0016788 TREPR_2217 46914476e04708644009f839ee7f5369 282 Gene3D G3DSA:3.20.20.140 20 279 6.2E-32 T 13-10-2018 TREPR_1975 3c1398e9c8c94526c718bffd3a566561 373 Gene3D G3DSA:2.40.50.140 293 354 7.8E-14 T 13-10-2018 TREPR_1975 3c1398e9c8c94526c718bffd3a566561 373 SMART SM00382 28 217 7.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1975 3c1398e9c8c94526c718bffd3a566561 373 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1975 3c1398e9c8c94526c718bffd3a566561 373 SUPERFAMILY SSF52540 4 248 1.29E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1975 3c1398e9c8c94526c718bffd3a566561 373 Pfam PF00005 ABC transporter 19 167 6.8E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1975 3c1398e9c8c94526c718bffd3a566561 373 Gene3D G3DSA:2.40.50.100 246 366 7.8E-14 T 13-10-2018 TREPR_1975 3c1398e9c8c94526c718bffd3a566561 373 Gene3D G3DSA:3.40.50.300 1 244 3.9E-71 T 13-10-2018 TREPR_1975 3c1398e9c8c94526c718bffd3a566561 373 SUPERFAMILY SSF50331 243 369 2.55E-14 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_0981 09595b10a197e816c0db884884dd900b 523 Gene3D G3DSA:3.20.20.70 5 280 8.9E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0981 09595b10a197e816c0db884884dd900b 523 Gene3D G3DSA:1.10.238.260 284 399 2.7E-37 T 13-10-2018 TREPR_0981 09595b10a197e816c0db884884dd900b 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 9 501 5.0E-212 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0981 09595b10a197e816c0db884884dd900b 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 203 216 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0981 09595b10a197e816c0db884884dd900b 523 Pfam PF00682 HMGL-like 9 277 4.9E-94 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TREPR_0981 09595b10a197e816c0db884884dd900b 523 SMART SM00917 373 504 3.4E-29 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0981 09595b10a197e816c0db884884dd900b 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 16 32 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0981 09595b10a197e816c0db884884dd900b 523 Gene3D G3DSA:3.30.160.270 400 504 4.4E-9 T 13-10-2018 TREPR_0981 09595b10a197e816c0db884884dd900b 523 SUPERFAMILY SSF51569 6 295 4.4E-97 T 13-10-2018 TREPR_0981 09595b10a197e816c0db884884dd900b 523 SUPERFAMILY SSF110921 416 502 1.57E-20 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0981 09595b10a197e816c0db884884dd900b 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 6 513 41.64 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0981 09595b10a197e816c0db884884dd900b 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 374 503 5.8E-33 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 SUPERFAMILY SSF52172 4 122 1.28E-29 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 Gene3D G3DSA:3.40.50.12740 5 206 4.3E-53 T 13-10-2018 TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 SUPERFAMILY SSF46894 137 205 5.78E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 SMART SM00448 5 118 1.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 SMART SM00421 143 200 9.7E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 7.2E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 Pfam PF00072 Response regulator receiver domain 7 118 1.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 7.4E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 7.4E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3347 1069eebcf117ec4575fd48fb5b5527f3 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 7.4E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1779 4042f14d86b9a7df847e0853784db6dc 217 Gene3D G3DSA:3.40.930.10 67 217 6.7E-33 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_1779 4042f14d86b9a7df847e0853784db6dc 217 Pfam PF12728 Helix-turn-helix domain 7 55 1.1E-18 T 13-10-2018 TREPR_1779 4042f14d86b9a7df847e0853784db6dc 217 SUPERFAMILY SSF55804 73 214 4.84E-28 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_1779 4042f14d86b9a7df847e0853784db6dc 217 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 73 213 1.8E-27 T 13-10-2018 IPR002178 PTS EIIA type-2 domain TREPR_1779 4042f14d86b9a7df847e0853784db6dc 217 Gene3D G3DSA:1.10.1660.10 5 54 1.5E-8 T 13-10-2018 TREPR_1779 4042f14d86b9a7df847e0853784db6dc 217 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 52 2.4E-16 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 TREPR_1779 4042f14d86b9a7df847e0853784db6dc 217 SUPERFAMILY SSF46955 6 55 9.15E-11 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily TREPR_2485 351aabca974683e758a79ae404fcf9e0 430 Gene3D G3DSA:3.80.30.20 1 324 7.9E-67 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TREPR_2485 351aabca974683e758a79ae404fcf9e0 430 SMART SM00729 5 227 2.9E-27 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_2485 351aabca974683e758a79ae404fcf9e0 430 Pfam PF04055 Radical SAM superfamily 10 176 2.9E-10 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_2485 351aabca974683e758a79ae404fcf9e0 430 SUPERFAMILY SSF102114 6 412 1.2E-74 T 13-10-2018 TREPR_1631 4b375715fc9516f58232493ff06665ad 143 SUPERFAMILY SSF54637 1 130 1.8E-30 T 13-10-2018 IPR029069 HotDog domain superfamily TREPR_1631 4b375715fc9516f58232493ff06665ad 143 Gene3D G3DSA:3.10.129.10 1 135 1.7E-28 T 13-10-2018 TREPR_1631 4b375715fc9516f58232493ff06665ad 143 Pfam PF13279 Thioesterase-like superfamily 10 124 3.4E-9 T 13-10-2018 TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 273 279 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 Gene3D G3DSA:3.40.50.150 167 468 4.5E-74 T 13-10-2018 TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 Pfam PF12161 HsdM N-terminal domain 6 130 4.9E-14 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 Pfam PF02384 N-6 DNA Methylase 144 453 3.0E-64 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 Gene3D G3DSA:1.20.1260.30 1 166 6.9E-26 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 270 282 7.4E-20 T 13-10-2018 TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 164 180 7.4E-20 T 13-10-2018 TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 188 202 7.4E-20 T 13-10-2018 TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 300 324 7.4E-20 T 13-10-2018 TREPR_0824 67871926bc147ad34dac1cbccd3db46f 488 SUPERFAMILY SSF53335 6 488 4.43E-119 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 Pfam PF00037 4Fe-4S binding domain 164 187 9.7E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 Gene3D G3DSA:3.20.20.20 37 100 5.3E-12 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 Pfam PF04060 Putative Fe-S cluster 44 75 4.2E-12 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 247 258 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 93 6.9E-23 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 SUPERFAMILY SSF54862 133 190 1.82E-12 T 13-10-2018 TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 193 27.569 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 Pfam PF12838 4Fe-4S dicluster domain 218 261 2.6E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 Gene3D G3DSA:3.30.70.20 204 269 1.1E-11 T 13-10-2018 TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 Gene3D G3DSA:3.30.70.20 135 193 8.2E-12 T 13-10-2018 TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 SUPERFAMILY SSF54862 198 264 2.87E-13 T 13-10-2018 TREPR_0305 344cef83e6484137381cd88b8ca80d88 272 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1840 b304228c13186b43d3d8e49dd097ec71 118 SMART SM00900 46 117 3.2E-6 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TREPR_1840 b304228c13186b43d3d8e49dd097ec71 118 Pfam PF04205 FMN-binding domain 56 118 5.3E-8 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TREPR_1840 b304228c13186b43d3d8e49dd097ec71 118 Gene3D G3DSA:3.90.1010.20 72 118 5.3E-5 T 13-10-2018 TREPR_3093 176cab8d4a8d263750eb75f3de3da469 203 Gene3D G3DSA:3.90.550.10 11 202 2.6E-38 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3093 176cab8d4a8d263750eb75f3de3da469 203 Pfam PF12804 MobA-like NTP transferase domain 12 150 6.9E-26 T 13-10-2018 IPR025877 MobA-like NTP transferase TREPR_3093 176cab8d4a8d263750eb75f3de3da469 203 SUPERFAMILY SSF53448 11 193 8.18E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3093 176cab8d4a8d263750eb75f3de3da469 203 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 8 195 22.232 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 TREPR_1523 9832a274a6e6f6535e11342a851eecc1 565 SUPERFAMILY SSF52540 352 529 5.98E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1523 9832a274a6e6f6535e11342a851eecc1 565 Pfam PF00005 ABC transporter 353 483 1.7E-12 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1523 9832a274a6e6f6535e11342a851eecc1 565 Gene3D G3DSA:3.40.50.300 279 562 2.1E-33 T 13-10-2018 TREPR_1523 9832a274a6e6f6535e11342a851eecc1 565 Pfam PF00005 ABC transporter 18 184 8.8E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1523 9832a274a6e6f6535e11342a851eecc1 565 Gene3D G3DSA:3.40.50.300 2 278 7.1E-58 T 13-10-2018 TREPR_1523 9832a274a6e6f6535e11342a851eecc1 565 SMART SM00382 361 528 0.015 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1523 9832a274a6e6f6535e11342a851eecc1 565 SMART SM00382 26 231 3.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1523 9832a274a6e6f6535e11342a851eecc1 565 SUPERFAMILY SSF52540 2 251 8.5E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1523 9832a274a6e6f6535e11342a851eecc1 565 Pfam PF12848 ABC transporter 224 294 2.2E-18 T 13-10-2018 IPR032781 ABC-transporter extension domain TREPR_2111 09b44c75bff016ab9b621721b3e228ef 471 Pfam PF00691 OmpA family 370 461 1.0E-13 T 13-10-2018 IPR006665 OmpA-like domain TREPR_2111 09b44c75bff016ab9b621721b3e228ef 471 Gene3D G3DSA:3.30.1330.60 343 470 1.9E-23 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_2111 09b44c75bff016ab9b621721b3e228ef 471 SUPERFAMILY SSF103088 359 467 1.26E-21 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 210 367 2.4E-27 T 13-10-2018 IPR005249 Conserved hypothetical protein CHP00488 TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 67 1.9E-9 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 Gene3D G3DSA:1.10.3210.10 200 387 1.1E-38 T 13-10-2018 TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 Gene3D G3DSA:3.40.50.620 1 189 8.1E-45 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 SUPERFAMILY SSF109604 200 345 2.36E-16 T 13-10-2018 TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 189 25.625 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 SUPERFAMILY SSF52374 2 189 1.54E-35 T 13-10-2018 TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 Pfam PF01966 HD domain 218 331 4.3E-7 T 13-10-2018 IPR006674 HD domain TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 Pfam PF01467 Cytidylyltransferase-like 5 161 7.2E-22 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TREPR_3452 f08d52ef901485b19d9a703a8d7792bc 389 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 188 1.2E-38 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TREPR_0743 015e9719366c6cd59c33425f54c8b3b2 111 Pfam PF01909 Nucleotidyltransferase domain 32 68 6.7E-7 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TREPR_0743 015e9719366c6cd59c33425f54c8b3b2 111 Gene3D G3DSA:3.30.460.10 6 102 6.1E-13 T 13-10-2018 TREPR_0743 015e9719366c6cd59c33425f54c8b3b2 111 SUPERFAMILY SSF81301 28 97 7.63E-11 T 13-10-2018 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 SUPERFAMILY SSF52833 26 127 3.47E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 Gene3D G3DSA:1.20.1440.230 467 564 2.1E-35 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 Gene3D G3DSA:3.40.50.11540 193 371 8.1E-78 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 SMART SM00928 469 514 5.9E-24 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 578 589 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 Pfam PF13237 4Fe-4S dicluster domain 572 619 4.3E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 Pfam PF10531 SLBB domain 384 432 4.4E-7 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 Gene3D G3DSA:3.40.30.10 23 130 1.9E-23 T 13-10-2018 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 Gene3D G3DSA:3.30.70.20 565 627 2.2E-14 T 13-10-2018 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 SUPERFAMILY SSF142984 381 464 3.4E-25 T 13-10-2018 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 188 359 2.0E-46 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 608 619 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 SUPERFAMILY SSF54862 558 624 4.42E-16 T 13-10-2018 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 471 554 8.5E-32 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 SUPERFAMILY SSF142019 139 380 1.07E-87 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 482 493 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 Gene3D G3DSA:3.10.20.600 372 466 5.8E-33 T 13-10-2018 TREPR_3287 5f90f0a343dfb5be805cd264f7ecb581 627 SUPERFAMILY SSF140490 466 566 2.22E-38 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0597 e7419980e44532e0b76b705973539604 332 SUPERFAMILY SSF55347 129 295 6.38E-32 T 13-10-2018 TREPR_0597 e7419980e44532e0b76b705973539604 332 SUPERFAMILY SSF51735 3 156 7.88E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0597 e7419980e44532e0b76b705973539604 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 122 5.1E-20 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TREPR_0597 e7419980e44532e0b76b705973539604 332 Gene3D G3DSA:3.30.360.10 126 329 9.2E-47 T 13-10-2018 TREPR_0597 e7419980e44532e0b76b705973539604 332 Gene3D G3DSA:3.40.50.720 3 125 2.1E-31 T 13-10-2018 TREPR_1805 8e12c9f6b789eb394146f3dfddad7824 415 Gene3D G3DSA:3.40.1480.10 248 409 2.5E-137 T 13-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily TREPR_1805 8e12c9f6b789eb394146f3dfddad7824 415 SUPERFAMILY SSF82544 9 413 7.98E-131 T 13-10-2018 TREPR_1805 8e12c9f6b789eb394146f3dfddad7824 415 Pfam PF13660 Domain of unknown function (DUF4147) 8 230 3.2E-70 T 13-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 TREPR_1805 8e12c9f6b789eb394146f3dfddad7824 415 Gene3D G3DSA:3.40.50.10180 38 247 2.5E-137 T 13-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 TREPR_1805 8e12c9f6b789eb394146f3dfddad7824 415 Pfam PF05161 MOFRL family 303 408 3.8E-35 T 13-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 TREPR_0653 d8634732461a757688e9c11256089b09 352 SUPERFAMILY SSF53335 48 285 1.84E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0653 d8634732461a757688e9c11256089b09 352 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 93 107 1.4E-15 T 13-10-2018 TREPR_0653 d8634732461a757688e9c11256089b09 352 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 60 76 1.4E-15 T 13-10-2018 TREPR_0653 d8634732461a757688e9c11256089b09 352 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 169 181 1.4E-15 T 13-10-2018 TREPR_0653 d8634732461a757688e9c11256089b09 352 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 200 224 1.4E-15 T 13-10-2018 TREPR_0653 d8634732461a757688e9c11256089b09 352 Pfam PF07669 Eco57I restriction-modification methylase 168 274 1.6E-8 T 13-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 TREPR_0653 d8634732461a757688e9c11256089b09 352 Gene3D G3DSA:3.40.50.150 46 334 4.7E-32 T 13-10-2018 TREPR_0653 d8634732461a757688e9c11256089b09 352 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 172 178 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_0819 a68d61a1db75027261059213766539cc 330 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 56 134 9.7E-16 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TREPR_0819 a68d61a1db75027261059213766539cc 330 Pfam PF00589 Phage integrase family 163 317 5.0E-31 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TREPR_0819 a68d61a1db75027261059213766539cc 330 Gene3D G3DSA:1.10.150.130 47 152 2.1E-11 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal TREPR_0819 a68d61a1db75027261059213766539cc 330 Gene3D G3DSA:1.10.443.10 153 329 6.9E-45 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_0819 a68d61a1db75027261059213766539cc 330 SUPERFAMILY SSF56349 55 319 7.06E-50 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_3126 a7da138f64b59493cd8277387ace0982 577 SUPERFAMILY SSF52540 15 575 1.82E-240 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3126 a7da138f64b59493cd8277387ace0982 577 Pfam PF01268 Formate--tetrahydrofolate ligase 14 577 7.3E-269 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TREPR_3126 a7da138f64b59493cd8277387ace0982 577 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 349 360 - T 13-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TREPR_3126 a7da138f64b59493cd8277387ace0982 577 Gene3D G3DSA:3.10.410.10 464 553 1.0E-37 T 13-10-2018 TREPR_3126 a7da138f64b59493cd8277387ace0982 577 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 12 577 48.482 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TREPR_3126 a7da138f64b59493cd8277387ace0982 577 Gene3D G3DSA:3.30.1510.10 144 268 1.5E-205 T 13-10-2018 TREPR_3126 a7da138f64b59493cd8277387ace0982 577 Gene3D G3DSA:3.40.50.300 27 457 1.5E-205 T 13-10-2018 TREPR_1867 93f9ba027f3825da87052052988ac057 528 Gene3D G3DSA:3.80.10.10 345 453 1.3E-42 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1867 93f9ba027f3825da87052052988ac057 528 Pfam PF13306 Leucine rich repeats (6 copies) 265 358 5.7E-28 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_1867 93f9ba027f3825da87052052988ac057 528 Pfam PF13306 Leucine rich repeats (6 copies) 397 520 5.2E-37 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_1867 93f9ba027f3825da87052052988ac057 528 Gene3D G3DSA:3.80.10.10 457 527 1.0E-15 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1867 93f9ba027f3825da87052052988ac057 528 SUPERFAMILY SSF52058 269 506 3.8E-24 T 13-10-2018 TREPR_2686 6d310b1881fe1a1a9a209da9e24fa9d7 215 SUPERFAMILY SSF63862 154 201 8.5E-6 T 13-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TREPR_2686 6d310b1881fe1a1a9a209da9e24fa9d7 215 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 9 211 1.1E-26 T 13-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TREPR_2686 6d310b1881fe1a1a9a209da9e24fa9d7 215 Gene3D G3DSA:3.40.50.10240 6 215 2.6E-39 T 13-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TREPR_2686 6d310b1881fe1a1a9a209da9e24fa9d7 215 SUPERFAMILY SSF63999 12 110 1.24E-21 T 13-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TREPR_2686 6d310b1881fe1a1a9a209da9e24fa9d7 215 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 20 115 2.0E-13 T 13-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 TREPR_0848 c3c0e4c15be9b8d61e17d369c94c995d 204 SUPERFAMILY SSF100950 4 202 1.35E-42 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_0848 c3c0e4c15be9b8d61e17d369c94c995d 204 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 196 1.6E-37 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TREPR_0848 c3c0e4c15be9b8d61e17d369c94c995d 204 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 196 8.3E-38 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TREPR_0848 c3c0e4c15be9b8d61e17d369c94c995d 204 Gene3D G3DSA:3.40.50.10420 1 203 1.0E-50 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily TREPR_0848 c3c0e4c15be9b8d61e17d369c94c995d 204 PIRSF PIRSF006806 1 199 2.8E-33 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 SUPERFAMILY SSF88659 421 494 9.95E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Gene3D G3DSA:1.10.220.120 13 71 2.1E-10 T 13-10-2018 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 372 385 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Pfam PF04545 Sigma-70, region 4 516 569 2.9E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Pfam PF03979 Sigma-70 factor, region 1.1 14 83 8.7E-14 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 SUPERFAMILY SSF88946 95 418 8.3E-54 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Pfam PF04539 Sigma-70 region 3 427 503 1.5E-25 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 11 581 35.317 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 SUPERFAMILY SSF88659 478 580 8.6E-28 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Pfam PF04542 Sigma-70 region 2 348 417 1.6E-19 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 344 580 6.7E-118 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Pfam PF00140 Sigma-70 factor, region 1.2 96 127 2.6E-13 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Gene3D G3DSA:1.10.10.10 421 496 1.7E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 344 569 1.0E-36 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Gene3D G3DSA:1.10.601.10 94 420 7.8E-78 T 13-10-2018 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 541 567 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 PRINTS PR00046 Major sigma-70 factor signature 396 404 9.4E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 PRINTS PR00046 Major sigma-70 factor signature 372 385 9.4E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 PRINTS PR00046 Major sigma-70 factor signature 541 556 9.4E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 PRINTS PR00046 Major sigma-70 factor signature 556 567 9.4E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 PRINTS PR00046 Major sigma-70 factor signature 520 532 9.4E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_3612 4134330a9b348fd1f9ee97b61d8cb65c 582 Gene3D G3DSA:1.10.10.10 497 582 7.5E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 Pfam PF00764 Arginosuccinate synthase 6 390 2.0E-154 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 SUPERFAMILY SSF52402 2 197 1.59E-44 T 13-10-2018 TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 SUPERFAMILY SSF69864 172 398 5.62E-89 T 13-10-2018 TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 Gene3D G3DSA:3.40.50.620 5 170 2.5E-153 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 TIGRFAM TIGR00032 argG: argininosuccinate synthase 4 391 1.1E-144 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 Gene3D G3DSA:3.90.1260.10 63 353 2.5E-153 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 398 52.142 T 13-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TREPR_3350 47796fea67a61ef50d7f4819e7275039 433 Gene3D G3DSA:1.20.5.470 374 403 2.5E-8 T 13-10-2018 TREPR_1921 1497eb7708f39a7ad82e47b14a9de91b 149 SUPERFAMILY SSF141457 2 141 1.18E-42 T 13-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily TREPR_1921 1497eb7708f39a7ad82e47b14a9de91b 149 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 140 25.62 T 13-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 TREPR_1921 1497eb7708f39a7ad82e47b14a9de91b 149 Gene3D G3DSA:2.30.290.10 1 147 4.1E-50 T 13-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily TREPR_1921 1497eb7708f39a7ad82e47b14a9de91b 149 Pfam PF02623 FliW protein 19 137 2.7E-40 T 13-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 TREPR_2389 fb3d3b0781e1ebe84ca844c9360efa58 306 SUPERFAMILY SSF53448 6 224 1.69E-33 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2389 fb3d3b0781e1ebe84ca844c9360efa58 306 Gene3D G3DSA:3.90.550.10 3 243 5.6E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2389 fb3d3b0781e1ebe84ca844c9360efa58 306 Pfam PF00535 Glycosyl transferase family 2 6 143 1.2E-18 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_1394 51c5f1906236dfb1ddebcf47b167fb5a 159 Pfam PF08334 Type II secretion system (T2SS), protein G 50 158 9.3E-33 T 13-10-2018 IPR013545 Type II secretion system protein G TREPR_1394 51c5f1906236dfb1ddebcf47b167fb5a 159 SUPERFAMILY SSF54523 52 158 2.04E-27 T 13-10-2018 TREPR_1394 51c5f1906236dfb1ddebcf47b167fb5a 159 Gene3D G3DSA:3.30.700.10 50 158 5.4E-31 T 13-10-2018 TREPR_1394 51c5f1906236dfb1ddebcf47b167fb5a 159 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 25 159 2.3E-35 T 13-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 TREPR_3830 d02a29f34002dc27e345ec076eeea723 270 Pfam PF13187 4Fe-4S dicluster domain 222 269 4.0E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3830 d02a29f34002dc27e345ec076eeea723 270 SUPERFAMILY SSF54862 86 270 3.79E-19 T 13-10-2018 TREPR_3830 d02a29f34002dc27e345ec076eeea723 270 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 254 265 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3830 d02a29f34002dc27e345ec076eeea723 270 Gene3D G3DSA:3.30.70.20 218 270 8.6E-9 T 13-10-2018 TREPR_1521 9a46bbb36deed89cc031f12d3d45d48e 328 Pfam PF13407 Periplasmic binding protein domain 68 303 9.0E-38 T 13-10-2018 IPR025997 Periplasmic binding protein TREPR_1521 9a46bbb36deed89cc031f12d3d45d48e 328 Gene3D G3DSA:3.40.50.2300 149 321 1.6E-44 T 13-10-2018 TREPR_1521 9a46bbb36deed89cc031f12d3d45d48e 328 Gene3D G3DSA:3.40.50.2300 57 315 1.6E-44 T 13-10-2018 TREPR_1521 9a46bbb36deed89cc031f12d3d45d48e 328 SUPERFAMILY SSF53822 71 326 3.87E-48 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1646 7b93496de0e7a43fbc13c426127175e4 66 SUPERFAMILY SSF143034 2 62 5.62E-20 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1646 7b93496de0e7a43fbc13c426127175e4 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.479 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TREPR_1646 7b93496de0e7a43fbc13c426127175e4 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 65 4.6E-25 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TREPR_1646 7b93496de0e7a43fbc13c426127175e4 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1646 7b93496de0e7a43fbc13c426127175e4 66 Gene3D G3DSA:2.40.50.530 1 65 4.1E-22 T 13-10-2018 TREPR_1646 7b93496de0e7a43fbc13c426127175e4 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.2E-18 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TREPR_1646 7b93496de0e7a43fbc13c426127175e4 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.2E-18 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TREPR_1646 7b93496de0e7a43fbc13c426127175e4 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.2E-18 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TREPR_1646 7b93496de0e7a43fbc13c426127175e4 66 Pfam PF01632 Ribosomal protein L35 2 60 3.5E-22 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0755 7c2155301ea096eb87b4242cc9db0b47 231 Gene3D G3DSA:1.10.1240.10 3 84 5.8E-26 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0755 7c2155301ea096eb87b4242cc9db0b47 231 SUPERFAMILY SSF52242 73 214 3.92E-41 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_0755 7c2155301ea096eb87b4242cc9db0b47 231 Pfam PF02607 B12 binding domain 9 81 2.6E-17 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0755 7c2155301ea096eb87b4242cc9db0b47 231 Pfam PF02310 B12 binding domain 94 206 4.2E-23 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_0755 7c2155301ea096eb87b4242cc9db0b47 231 Gene3D G3DSA:3.40.50.280 85 214 1.9E-43 T 13-10-2018 TREPR_0755 7c2155301ea096eb87b4242cc9db0b47 231 SMART SM01018 5 88 2.8E-29 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_0755 7c2155301ea096eb87b4242cc9db0b47 231 SUPERFAMILY SSF47644 3 87 7.98E-22 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3134 e62c304f803e893d749f13d08738eb40 342 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 1.9E-32 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_3134 e62c304f803e893d749f13d08738eb40 342 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.9E-32 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_3134 e62c304f803e893d749f13d08738eb40 342 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 1.9E-32 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_3134 e62c304f803e893d749f13d08738eb40 342 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.9E-32 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_3134 e62c304f803e893d749f13d08738eb40 342 SUPERFAMILY SSF103039 45 230 4.01E-29 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_3134 e62c304f803e893d749f13d08738eb40 342 Gene3D G3DSA:3.40.1550.10 45 231 5.7E-66 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_3134 e62c304f803e893d749f13d08738eb40 342 Gene3D G3DSA:2.30.330.10 239 333 1.5E-6 T 13-10-2018 IPR036429 SpoA-like superfamily TREPR_3134 e62c304f803e893d749f13d08738eb40 342 Pfam PF02154 Flagellar motor switch protein FliM 39 229 2.9E-83 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_3134 e62c304f803e893d749f13d08738eb40 342 PIRSF PIRSF002888 1 334 4.8E-113 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_3134 e62c304f803e893d749f13d08738eb40 342 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 323 4.4E-116 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_3134 e62c304f803e893d749f13d08738eb40 342 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 322 2.6E-18 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) TREPR_3134 e62c304f803e893d749f13d08738eb40 342 SUPERFAMILY SSF101801 250 325 1.7E-12 T 13-10-2018 IPR036429 SpoA-like superfamily TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 SUPERFAMILY SSF55785 194 317 8.76E-10 T 13-10-2018 IPR035965 PAS domain superfamily TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 SUPERFAMILY SSF47384 319 398 4.12E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 Gene3D G3DSA:3.30.565.10 399 592 1.0E-51 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 SMART SM00448 620 737 6.9E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 Pfam PF00072 Response regulator receiver domain 622 737 3.1E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 SMART SM00388 332 397 2.4E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 Gene3D G3DSA:3.40.50.12740 619 743 3.3E-39 T 13-10-2018 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 Gene3D G3DSA:3.30.450.20 185 321 2.9E-13 T 13-10-2018 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 SUPERFAMILY SSF55874 386 586 3.12E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 587 1.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 543 1.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 529 1.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 568 1.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 Pfam PF00512 His Kinase A (phospho-acceptor) domain 332 396 6.4E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 Gene3D G3DSA:1.10.287.130 322 398 4.0E-23 T 13-10-2018 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 589 6.1E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 Pfam PF08448 PAS fold 205 318 2.5E-7 T 13-10-2018 IPR013656 PAS fold-4 TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 SMART SM00387 444 590 3.5E-41 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0969 f10a042438ae9312daa7a882029c0d84 743 SUPERFAMILY SSF52172 617 741 1.15E-34 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2850 3c50db7c3e030cfb29da5fcd63d48237 380 SUPERFAMILY SSF160544 264 369 8.11E-37 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TREPR_2850 3c50db7c3e030cfb29da5fcd63d48237 380 Gene3D G3DSA:3.40.1690.10 237 377 1.3E-52 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TREPR_2850 3c50db7c3e030cfb29da5fcd63d48237 380 Pfam PF01312 FlhB HrpN YscU SpaS Family 26 365 1.7E-117 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TREPR_2850 3c50db7c3e030cfb29da5fcd63d48237 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 28 50 1.7E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TREPR_2850 3c50db7c3e030cfb29da5fcd63d48237 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 247 264 1.7E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TREPR_2850 3c50db7c3e030cfb29da5fcd63d48237 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 320 341 1.7E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TREPR_2850 3c50db7c3e030cfb29da5fcd63d48237 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 245 1.7E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TREPR_2850 3c50db7c3e030cfb29da5fcd63d48237 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 291 306 1.7E-38 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TREPR_2850 3c50db7c3e030cfb29da5fcd63d48237 380 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 25 371 3.0E-119 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 475 44.11 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 PRINTS PR01042 Aspartyl-tRNA synthetase signature 230 243 1.5E-15 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 PRINTS PR01042 Aspartyl-tRNA synthetase signature 390 406 1.5E-15 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 PRINTS PR01042 Aspartyl-tRNA synthetase signature 430 444 1.5E-15 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 226 1.5E-15 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 Pfam PF00152 tRNA synthetases class II (D, K and N) 126 468 3.6E-80 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 Gene3D G3DSA:3.30.930.10 115 474 8.9E-109 T 13-10-2018 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 SUPERFAMILY SSF55681 124 469 4.15E-93 T 13-10-2018 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 Gene3D G3DSA:2.40.50.140 2 109 4.3E-17 T 13-10-2018 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 SUPERFAMILY SSF50249 14 105 1.07E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2215 8320377d2d35776504809eeca23c79d4 475 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 4.2E-9 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TREPR_2215 8320377d2d35776504809eeca23c79d4 475 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 15 475 8.7E-180 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 303 357 6.2E-14 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 SMART SM00532 3 416 8.7E-91 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 SUPERFAMILY SSF47781 375 533 1.11E-34 T 13-10-2018 IPR010994 RuvA domain 2-like TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Hamap MF_01588 DNA ligase [ligA]. 2 633 37.733 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 SMART SM00292 557 636 2.4E-10 T 13-10-2018 IPR001357 BRCT domain TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Gene3D G3DSA:1.10.150.20 400 471 5.9E-15 T 13-10-2018 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Gene3D G3DSA:3.40.50.10190 546 635 5.0E-23 T 13-10-2018 IPR036420 BRCT domain superfamily TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 PIRSF PIRSF001604 1 637 1.9E-156 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Pfam PF14520 Helix-hairpin-helix domain 484 533 4.1E-8 T 13-10-2018 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Gene3D G3DSA:2.40.50.140 286 357 9.9E-15 T 13-10-2018 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 SMART SM00278 412 431 2200.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 SMART SM00278 446 465 12.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 SMART SM00278 511 530 56.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Gene3D G3DSA:3.30.1490.70 70 283 1.2E-48 T 13-10-2018 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 SUPERFAMILY SSF50249 288 361 1.16E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 559 632 2.1E-12 T 13-10-2018 IPR001357 BRCT domain TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Gene3D G3DSA:1.10.150.20 482 534 4.6E-10 T 13-10-2018 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 SUPERFAMILY SSF52113 555 634 2.13E-15 T 13-10-2018 IPR036420 BRCT domain superfamily TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Gene3D G3DSA:1.10.287.610 2 50 2.7E-5 T 13-10-2018 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 284 1.9E-43 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 100 129 - T 13-10-2018 IPR018239 NAD-dependent DNA ligase, active site TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 628 3.2E-153 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 SUPERFAMILY SSF56091 4 285 2.3E-60 T 13-10-2018 TREPR_2640 ddaf8a392684382cc9fbd151f2cf5df4 656 Gene3D G3DSA:3.30.470.30 62 225 1.2E-48 T 13-10-2018 TREPR_2309 84e512324088ba1b083815e5fe5c29ca 478 Pfam PF00990 Diguanylate cyclase, GGDEF domain 316 470 1.0E-40 T 13-10-2018 IPR000160 GGDEF domain TREPR_2309 84e512324088ba1b083815e5fe5c29ca 478 Gene3D G3DSA:3.30.70.270 311 476 4.6E-46 T 13-10-2018 TREPR_2309 84e512324088ba1b083815e5fe5c29ca 478 SMART SM00267 305 475 1.9E-44 T 13-10-2018 IPR000160 GGDEF domain TREPR_2309 84e512324088ba1b083815e5fe5c29ca 478 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 314 473 4.4E-40 T 13-10-2018 IPR000160 GGDEF domain TREPR_2309 84e512324088ba1b083815e5fe5c29ca 478 SUPERFAMILY SSF55073 320 473 3.3E-41 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_0963 a75b0e7b6a930931980dfb7b2ddb6465 265 Gene3D G3DSA:3.40.190.10 129 229 6.2E-72 T 13-10-2018 TREPR_0963 a75b0e7b6a930931980dfb7b2ddb6465 265 SUPERFAMILY SSF53850 6 260 7.25E-49 T 13-10-2018 TREPR_0963 a75b0e7b6a930931980dfb7b2ddb6465 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 7.6E-40 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0963 a75b0e7b6a930931980dfb7b2ddb6465 265 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 67 80 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site TREPR_0963 a75b0e7b6a930931980dfb7b2ddb6465 265 SMART SM00062 43 260 2.3E-45 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0963 a75b0e7b6a930931980dfb7b2ddb6465 265 Gene3D G3DSA:3.40.190.10 38 248 6.2E-72 T 13-10-2018 TREPR_3591 66fa05dc890d43edb4e56dec84d09e88 920 SMART SM00044 604 832 6.2E-7 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_3591 66fa05dc890d43edb4e56dec84d09e88 920 Gene3D G3DSA:3.30.70.1230 632 852 1.5E-61 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_3591 66fa05dc890d43edb4e56dec84d09e88 920 SUPERFAMILY SSF55073 638 844 1.32E-51 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_3591 66fa05dc890d43edb4e56dec84d09e88 920 Pfam PF05226 CHASE2 domain 15 545 2.9E-33 T 13-10-2018 IPR007890 CHASE2 TREPR_3591 66fa05dc890d43edb4e56dec84d09e88 920 SMART SM01080 22 547 6.5E-15 T 13-10-2018 IPR007890 CHASE2 TREPR_3591 66fa05dc890d43edb4e56dec84d09e88 920 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 643 836 1.1E-27 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_1977 609b7fbafd81a7a7afc5b20ea5ff204a 256 Gene3D G3DSA:3.40.50.1000 1 218 2.8E-32 T 13-10-2018 IPR023214 HAD superfamily TREPR_1977 609b7fbafd81a7a7afc5b20ea5ff204a 256 SUPERFAMILY SSF56784 1 247 1.41E-34 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_1977 609b7fbafd81a7a7afc5b20ea5ff204a 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 122 135 2.0E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1977 609b7fbafd81a7a7afc5b20ea5ff204a 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 2.0E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1977 609b7fbafd81a7a7afc5b20ea5ff204a 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.0E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1977 609b7fbafd81a7a7afc5b20ea5ff204a 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 2.0E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1977 609b7fbafd81a7a7afc5b20ea5ff204a 256 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 112 205 5.8E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1977 609b7fbafd81a7a7afc5b20ea5ff204a 256 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 205 2.2E-19 T 13-10-2018 TREPR_2510 a76944699f770482c3c367230cef2b81 371 Pfam PF01168 Alanine racemase, N-terminal domain 16 241 7.2E-31 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_2510 a76944699f770482c3c367230cef2b81 371 Pfam PF14031 Putative serine dehydratase domain 257 352 9.5E-19 T 13-10-2018 IPR026956 D-serine dehydratase-like domain TREPR_2510 a76944699f770482c3c367230cef2b81 371 Gene3D G3DSA:3.20.20.10 18 240 4.0E-104 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_2510 a76944699f770482c3c367230cef2b81 371 SUPERFAMILY SSF51419 16 244 3.71E-38 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_2510 a76944699f770482c3c367230cef2b81 371 Gene3D G3DSA:2.40.37.20 9 360 4.0E-104 T 13-10-2018 TREPR_2510 a76944699f770482c3c367230cef2b81 371 SMART SM01119 257 355 4.0E-22 T 13-10-2018 IPR026956 D-serine dehydratase-like domain TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 Gene3D G3DSA:3.40.190.10 37 315 3.3E-78 T 13-10-2018 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 Gene3D G3DSA:3.40.190.10 138 260 3.3E-78 T 13-10-2018 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 SUPERFAMILY SSF53850 32 348 1.05E-66 T 13-10-2018 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 Pfam PF13416 Bacterial extracellular solute-binding protein 48 305 1.5E-23 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 4.1E-29 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 38 54 4.1E-29 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 209 228 4.1E-29 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 253 272 4.1E-29 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 129 145 4.1E-29 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 98 111 4.1E-29 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 172 191 4.1E-29 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 82 96 4.1E-29 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_1465 2afcc3759fe0fc781ee631ceb580bdf7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 54 75 4.1E-29 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 Pfam PF00204 DNA gyrase B 306 451 1.0E-28 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 SMART SM00433 125 686 2.1E-145 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 124 255 1.0E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR01159 DNA gyrase subunit B signature 277 290 1.3E-6 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR01159 DNA gyrase subunit B signature 91 101 1.3E-6 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR01159 DNA gyrase subunit B signature 423 437 1.3E-6 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR01159 DNA gyrase subunit B signature 662 678 1.3E-6 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR01159 DNA gyrase subunit B signature 262 277 1.3E-6 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 Gene3D G3DSA:3.30.230.10 300 457 1.2E-35 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 Gene3D G3DSA:3.40.50.670 464 689 1.1E-59 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 SUPERFAMILY SSF56719 461 684 1.28E-54 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 Pfam PF01751 Toprim domain 487 592 1.2E-9 T 13-10-2018 IPR006171 TOPRIM domain TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 ProSitePatterns PS00177 DNA topoisomerase II signature. 489 497 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 SUPERFAMILY SSF54211 307 452 4.74E-31 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 SUPERFAMILY SSF55874 91 290 4.86E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR00418 DNA topoisomerase II family signature 627 643 1.7E-47 T 13-10-2018 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR00418 DNA topoisomerase II family signature 125 140 1.7E-47 T 13-10-2018 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR00418 DNA topoisomerase II family signature 567 584 1.7E-47 T 13-10-2018 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR00418 DNA topoisomerase II family signature 549 565 1.7E-47 T 13-10-2018 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR00418 DNA topoisomerase II family signature 487 501 1.7E-47 T 13-10-2018 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR00418 DNA topoisomerase II family signature 587 599 1.7E-47 T 13-10-2018 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR00418 DNA topoisomerase II family signature 194 208 1.7E-47 T 13-10-2018 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR00418 DNA topoisomerase II family signature 159 172 1.7E-47 T 13-10-2018 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 PRINTS PR00418 DNA topoisomerase II family signature 340 353 1.7E-47 T 13-10-2018 TREPR_2445 620b1c207edbb754a3919749fd8798b7 690 Gene3D G3DSA:3.30.565.10 94 295 9.9E-52 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 51 142 7.2E-8 T 13-10-2018 TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 SUPERFAMILY SSF54211 214 350 8.34E-23 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 Gene3D G3DSA:3.30.1370.100 516 605 1.8E-37 T 13-10-2018 TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 Pfam PF08676 MutL C terminal dimerisation domain 482 610 2.0E-22 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 25 649 21.193 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 SMART SM00853 477 610 2.6E-23 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 SUPERFAMILY SSF118116 480 647 2.75E-27 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 245 349 5.5E-23 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 Gene3D G3DSA:2.30.42.20 480 645 1.8E-37 T 13-10-2018 TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 SMART SM01340 233 351 7.0E-30 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 SUPERFAMILY SSF55874 25 234 1.12E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 Gene3D G3DSA:3.30.565.10 26 234 1.0E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 Gene3D G3DSA:3.30.230.10 243 350 2.3E-22 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_2468 67af4c11381d17ebb94b7520ef78ad17 652 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 117 123 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site TREPR_2906 6f5f9ede0b2ceb6492f69700df05a820 70 SUPERFAMILY SSF50331 1 69 1.82E-21 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_2906 6f5f9ede0b2ceb6492f69700df05a820 70 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 68 2.8E-26 T 13-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 TREPR_2906 6f5f9ede0b2ceb6492f69700df05a820 70 Gene3D G3DSA:2.40.50.100 1 67 7.6E-26 T 13-10-2018 TREPR_2906 6f5f9ede0b2ceb6492f69700df05a820 70 Pfam PF03459 TOBE domain 4 66 1.3E-15 T 13-10-2018 IPR005116 Transport-associated OB, type 1 TREPR_0343 3a649b6e96f0b994a5fbe69717b35a35 361 Gene3D G3DSA:3.40.50.2000 195 352 7.0E-29 T 13-10-2018 TREPR_0343 3a649b6e96f0b994a5fbe69717b35a35 361 Gene3D G3DSA:3.40.50.2000 2 190 2.2E-5 T 13-10-2018 TREPR_0343 3a649b6e96f0b994a5fbe69717b35a35 361 SUPERFAMILY SSF53756 7 354 3.24E-44 T 13-10-2018 TREPR_0343 3a649b6e96f0b994a5fbe69717b35a35 361 Pfam PF13692 Glycosyl transferases group 1 198 330 6.2E-20 T 13-10-2018 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 SUPERFAMILY SSF52540 167 412 2.42E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1201 5b830673adb235365ce515720c2fecc7 637 ProSitePatterns PS00674 AAA-protein family signature. 312 330 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 Gene3D G3DSA:1.20.58.760 423 622 1.9E-69 T 13-10-2018 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 340 1.2E-42 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 Pfam PF06480 FtsH Extracellular 27 108 6.9E-8 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 SMART SM00382 205 344 1.2E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1201 5b830673adb235365ce515720c2fecc7 637 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 122 612 3.7E-221 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 Pfam PF01434 Peptidase family M41 403 611 7.4E-71 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 SUPERFAMILY SSF140990 423 613 2.35E-64 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 Gene3D G3DSA:1.10.8.60 343 420 1.1E-28 T 13-10-2018 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 20 620 35.19 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 Gene3D G3DSA:2.40.50.920 45 119 2.0E-5 T 13-10-2018 TREPR_1201 5b830673adb235365ce515720c2fecc7 637 Gene3D G3DSA:3.40.50.300 160 341 3.0E-65 T 13-10-2018 TREPR_1430 c9df258fa56196811145d0d11bc55b2f 116 Pfam PF01381 Helix-turn-helix 8 62 6.5E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1430 c9df258fa56196811145d0d11bc55b2f 116 SMART SM00530 7 62 7.2E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1430 c9df258fa56196811145d0d11bc55b2f 116 SUPERFAMILY SSF47413 2 68 1.15E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1430 c9df258fa56196811145d0d11bc55b2f 116 Gene3D G3DSA:1.10.260.40 4 70 9.6E-13 T 13-10-2018 TREPR_2764 079c9f35d8bb4f4efb72cd6c0e02019e 133 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 7 120 6.8E-9 T 13-10-2018 TREPR_0705 b8ee7a2e07fac719523726ec292809f0 344 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0705 b8ee7a2e07fac719523726ec292809f0 344 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 320 1.3E-26 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0705 b8ee7a2e07fac719523726ec292809f0 344 SUPERFAMILY SSF52540 33 305 6.53E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0705 b8ee7a2e07fac719523726ec292809f0 344 SMART SM00382 35 241 1.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0705 b8ee7a2e07fac719523726ec292809f0 344 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 2.6E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0705 b8ee7a2e07fac719523726ec292809f0 344 Pfam PF00005 ABC transporter 26 183 3.1E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0705 b8ee7a2e07fac719523726ec292809f0 344 Gene3D G3DSA:3.40.50.300 4 327 2.0E-102 T 13-10-2018 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 Pfam PF00742 Homoserine dehydrogenase 644 840 1.0E-48 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 21 478 7.6E-127 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 PIRSF PIRSF000727 21 847 2.4E-266 T 13-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 Pfam PF00696 Amino acid kinase family 21 302 7.5E-50 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 Pfam PF01842 ACT domain 343 385 2.6E-6 T 13-10-2018 IPR002912 ACT domain TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 Gene3D G3DSA:3.30.360.10 655 825 5.9E-114 T 13-10-2018 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 SUPERFAMILY SSF55021 322 399 9.99E-19 T 13-10-2018 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 ProSitePatterns PS00324 Aspartokinase signature. 23 31 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 SUPERFAMILY SSF55021 407 482 2.96E-22 T 13-10-2018 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 SUPERFAMILY SSF53633 21 316 5.11E-77 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 Gene3D G3DSA:3.40.1160.10 20 317 7.9E-99 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 SUPERFAMILY SSF51735 483 666 5.25E-27 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 Pfam PF13840 ACT domain 412 475 9.4E-7 T 13-10-2018 IPR027795 CASTOR, ACT domain TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 Gene3D G3DSA:3.40.50.720 485 843 5.9E-114 T 13-10-2018 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 SUPERFAMILY SSF55347 644 827 2.88E-43 T 13-10-2018 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 Gene3D G3DSA:3.30.2130.10 321 479 1.5E-47 T 13-10-2018 TREPR_2791 f8c759d90f8e7dd447b9a2709dd14f2e 847 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 491 635 9.1E-13 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 TREPR_1687 0e733eafd064b894fbcf02fcdf0b143f 804 Pfam PF07698 7TM receptor with intracellular HD hydrolase 316 503 6.4E-24 T 13-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain TREPR_1687 0e733eafd064b894fbcf02fcdf0b143f 804 TIGRFAM TIGR00277 HDIG: HDIG domain 526 623 2.1E-27 T 13-10-2018 IPR006675 HDIG domain TREPR_1687 0e733eafd064b894fbcf02fcdf0b143f 804 Gene3D G3DSA:1.10.3210.10 517 717 3.4E-23 T 13-10-2018 TREPR_1687 0e733eafd064b894fbcf02fcdf0b143f 804 Pfam PF07697 7TM-HD extracellular 61 304 1.5E-30 T 13-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain TREPR_1687 0e733eafd064b894fbcf02fcdf0b143f 804 SMART SM00471 524 678 1.4E-9 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_1687 0e733eafd064b894fbcf02fcdf0b143f 804 SUPERFAMILY SSF109604 527 713 7.85E-18 T 13-10-2018 TREPR_1687 0e733eafd064b894fbcf02fcdf0b143f 804 Pfam PF01966 HD domain 528 668 1.5E-19 T 13-10-2018 IPR006674 HD domain TREPR_2910 5e3ff31bfd8150fd8bc425ffa54b296f 273 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 51 268 1.9E-44 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 TREPR_2910 5e3ff31bfd8150fd8bc425ffa54b296f 273 SUPERFAMILY SSF53850 45 271 6.37E-52 T 13-10-2018 TREPR_2910 5e3ff31bfd8150fd8bc425ffa54b296f 273 Gene3D G3DSA:3.40.190.10 126 232 5.7E-63 T 13-10-2018 TREPR_2910 5e3ff31bfd8150fd8bc425ffa54b296f 273 PIRSF PIRSF004846 1 272 7.1E-61 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 TREPR_2910 5e3ff31bfd8150fd8bc425ffa54b296f 273 Pfam PF13531 Bacterial extracellular solute-binding protein 47 269 8.3E-40 T 13-10-2018 TREPR_2910 5e3ff31bfd8150fd8bc425ffa54b296f 273 Gene3D G3DSA:3.40.190.10 48 269 5.7E-63 T 13-10-2018 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 Pfam PF02833 DHHA2 domain 421 543 7.7E-15 T 13-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 Pfam PF01368 DHH family 4 385 9.3E-28 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 SUPERFAMILY SSF54631 70 304 6.71E-18 T 13-10-2018 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 SMART SM01131 420 545 1.3E-24 T 13-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 Gene3D G3DSA:3.10.310.20 430 550 9.6E-27 T 13-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 SUPERFAMILY SSF75138 139 253 7.98E-16 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 SMART SM00116 259 307 3.8 T 13-10-2018 IPR000644 CBS domain TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 SMART SM00116 77 125 0.31 T 13-10-2018 IPR000644 CBS domain TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 Gene3D G3DSA:3.10.580.10 78 297 1.8E-42 T 13-10-2018 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 Pfam PF07085 DRTGG domain 146 246 2.0E-13 T 13-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 Gene3D G3DSA:3.40.1390.20 130 249 1.8E-42 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 Pfam PF00571 CBS domain 74 121 8.6E-6 T 13-10-2018 IPR000644 CBS domain TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 Gene3D G3DSA:3.90.1640.10 2 75 4.8E-18 T 13-10-2018 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 Gene3D G3DSA:3.90.1640.10 298 427 3.2E-40 T 13-10-2018 TREPR_1965 187d6a5260e90359402c63bacf4875e7 550 SUPERFAMILY SSF64182 4 543 7.95E-60 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily TREPR_1277 b702ed4130fce50d7487fa8620766725 421 SUPERFAMILY SSF53901 223 420 2.34E-65 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 TREPR_1277 b702ed4130fce50d7487fa8620766725 421 PIRSF PIRSF000447 1 421 5.7E-161 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TREPR_1277 b702ed4130fce50d7487fa8620766725 421 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 418 3.0E-170 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TREPR_1277 b702ed4130fce50d7487fa8620766725 421 SMART SM00825 Beta-ketoacyl synthase 5 411 2.6E-11 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TREPR_1277 b702ed4130fce50d7487fa8620766725 421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 255 7.6E-56 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TREPR_1277 b702ed4130fce50d7487fa8620766725 421 SUPERFAMILY SSF53901 3 260 1.11E-73 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 TREPR_1277 b702ed4130fce50d7487fa8620766725 421 Gene3D G3DSA:3.40.47.10 265 409 2.5E-48 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 TREPR_1277 b702ed4130fce50d7487fa8620766725 421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 377 5.4E-34 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TREPR_1277 b702ed4130fce50d7487fa8620766725 421 Gene3D G3DSA:3.40.47.10 1 263 2.2E-86 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 TREPR_1513 90e3871d44025cfff017d89276d0df6b 327 Gene3D G3DSA:3.40.50.2300 60 299 9.4E-55 T 13-10-2018 TREPR_1513 90e3871d44025cfff017d89276d0df6b 327 SUPERFAMILY SSF47413 1 52 1.28E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1513 90e3871d44025cfff017d89276d0df6b 327 Gene3D G3DSA:1.10.260.40 1 57 1.2E-13 T 13-10-2018 TREPR_1513 90e3871d44025cfff017d89276d0df6b 327 SUPERFAMILY SSF53822 60 325 5.5E-55 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1513 90e3871d44025cfff017d89276d0df6b 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 46 4.3E-12 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_1513 90e3871d44025cfff017d89276d0df6b 327 Gene3D G3DSA:3.40.50.2300 153 283 9.4E-55 T 13-10-2018 TREPR_1513 90e3871d44025cfff017d89276d0df6b 327 SMART SM00354 1 70 2.9E-8 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_1513 90e3871d44025cfff017d89276d0df6b 327 Pfam PF13377 Periplasmic binding protein-like domain 162 324 1.7E-33 T 13-10-2018 TREPR_2772 07936d4f6e6f992f83f924d6bcbb410f 141 Gene3D G3DSA:3.40.50.1010 11 140 1.1E-11 T 13-10-2018 TREPR_2772 07936d4f6e6f992f83f924d6bcbb410f 141 SUPERFAMILY SSF88723 12 127 3.36E-17 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_2772 07936d4f6e6f992f83f924d6bcbb410f 141 Pfam PF01850 PIN domain 13 124 1.9E-14 T 13-10-2018 IPR002716 PIN domain TREPR_1722 bdd69f9e1e47fcbb396550d087309cef 366 Gene3D G3DSA:3.40.50.2020 42 336 4.0E-58 T 13-10-2018 TREPR_1722 bdd69f9e1e47fcbb396550d087309cef 366 Gene3D G3DSA:3.40.50.2020 167 325 4.0E-58 T 13-10-2018 TREPR_1722 bdd69f9e1e47fcbb396550d087309cef 366 SUPERFAMILY SSF53271 193 348 1.31E-20 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_1722 bdd69f9e1e47fcbb396550d087309cef 366 SUPERFAMILY SSF53271 45 175 3.73E-15 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_1722 bdd69f9e1e47fcbb396550d087309cef 366 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 43 348 7.9E-47 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TREPR_1722 bdd69f9e1e47fcbb396550d087309cef 366 Pfam PF00156 Phosphoribosyl transferase domain 193 283 2.2E-8 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TREPR_1722 bdd69f9e1e47fcbb396550d087309cef 366 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 137 1.5E-16 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TREPR_1722 bdd69f9e1e47fcbb396550d087309cef 366 SMART SM01400 5 137 3.5E-6 T 13-10-2018 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 SUPERFAMILY SSF55874 346 516 5.11E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 SMART SM00448 543 658 4.2E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 SMART SM00387 404 520 6.9E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 518 9.4E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 1.3E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 Gene3D G3DSA:3.40.50.12740 543 665 1.7E-38 T 13-10-2018 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 SMART SM00388 292 357 5.0E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 Gene3D G3DSA:3.30.565.10 356 521 2.4E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 Gene3D G3DSA:1.10.287.130 258 355 1.0E-22 T 13-10-2018 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 SUPERFAMILY SSF52172 541 661 4.41E-33 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 Pfam PF00072 Response regulator receiver domain 546 656 1.6E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1633 cc8011051042b0f2fe8c8d671f9b6f16 667 SUPERFAMILY SSF47384 281 359 7.65E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2739 ced18867a163681bede2aebcfeb046d5 1073 Gene3D G3DSA:3.40.50.300 490 737 1.5E-36 T 13-10-2018 TREPR_2739 ced18867a163681bede2aebcfeb046d5 1073 Gene3D G3DSA:3.40.50.300 268 453 3.6E-42 T 13-10-2018 TREPR_2739 ced18867a163681bede2aebcfeb046d5 1073 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 213 2.3E-33 T 13-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TREPR_2739 ced18867a163681bede2aebcfeb046d5 1073 SUPERFAMILY SSF52540 237 449 3.12E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2739 ced18867a163681bede2aebcfeb046d5 1073 Gene3D G3DSA:3.90.1570.50 83 267 1.8E-28 T 13-10-2018 TREPR_2739 ced18867a163681bede2aebcfeb046d5 1073 Pfam PF04851 Type III restriction enzyme, res subunit 275 436 2.9E-16 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TREPR_2739 ced18867a163681bede2aebcfeb046d5 1073 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 45 729 1.3E-149 T 13-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 TREPR_2739 ced18867a163681bede2aebcfeb046d5 1073 SMART SM00487 268 463 9.5E-4 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2739 ced18867a163681bede2aebcfeb046d5 1073 Pfam PF11867 Domain of unknown function (DUF3387) 732 1039 3.1E-25 T 13-10-2018 IPR021810 Protein of unknown function DUF3387 TREPR_0921 1c7c960d31f8c6618604aef47408225a 57 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 57 8.1E-27 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0921 1c7c960d31f8c6618604aef47408225a 57 ProSitePatterns PS00582 Ribosomal protein L33 signature. 23 42 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_0921 1c7c960d31f8c6618604aef47408225a 57 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 3 55 18.599 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0921 1c7c960d31f8c6618604aef47408225a 57 Pfam PF00471 Ribosomal protein L33 10 55 2.3E-23 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0921 1c7c960d31f8c6618604aef47408225a 57 SUPERFAMILY SSF57829 5 55 1.79E-19 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TREPR_0921 1c7c960d31f8c6618604aef47408225a 57 Gene3D G3DSA:2.20.28.120 3 56 1.5E-23 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 SMART SM00448 2 115 6.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 450 465 4.5E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 465 481 4.5E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 SUPERFAMILY SSF46689 434 484 4.48E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 SMART SM00342 398 481 9.5E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 SUPERFAMILY SSF52172 2 121 5.69E-30 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 Pfam PF00072 Response regulator receiver domain 4 113 1.4E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 SUPERFAMILY SSF46689 384 432 6.27E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 435 477 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 Gene3D G3DSA:1.10.10.60 384 430 1.6E-12 T 13-10-2018 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 Pfam PF12833 Helix-turn-helix domain 405 481 4.1E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 Gene3D G3DSA:3.40.50.2300 2 134 2.7E-28 T 13-10-2018 TREPR_3004 ce18f15c964676aefa04a2cbcfd1f2d7 499 Gene3D G3DSA:1.10.10.60 431 484 1.8E-17 T 13-10-2018 TREPR_0703 5fef0342ddf12d4039730176164abd2c 320 SUPERFAMILY SSF161098 88 293 1.14E-24 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0703 5fef0342ddf12d4039730176164abd2c 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 309 1.2E-42 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0703 5fef0342ddf12d4039730176164abd2c 320 Gene3D G3DSA:1.10.3720.10 86 303 6.8E-29 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 Gene3D G3DSA:1.10.10.10 1 69 3.2E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 SUPERFAMILY SSF46785 3 69 8.01E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 Hamap MF_00015 LexA repressor [lexA]. 3 206 30.267 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 Pfam PF00717 Peptidase S24-like 125 190 1.3E-12 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 Pfam PF01726 LexA DNA binding domain 1 64 1.3E-17 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 SUPERFAMILY SSF51306 84 204 2.09E-32 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 Gene3D G3DSA:2.10.109.10 90 206 4.5E-40 T 13-10-2018 TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 205 1.1E-56 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 132 3.8E-7 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 173 3.8E-7 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TREPR_0683 098a43d16f2f2b52e84cb613f3d4602c 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 133 144 3.8E-7 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TREPR_2010 41aa1335ca852e87493b5075b09b3930 489 Gene3D G3DSA:1.10.443.10 208 396 2.0E-25 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_2010 41aa1335ca852e87493b5075b09b3930 489 Pfam PF00589 Phage integrase family 205 381 4.1E-18 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TREPR_2010 41aa1335ca852e87493b5075b09b3930 489 Gene3D G3DSA:1.10.150.130 74 193 9.3E-17 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal TREPR_2010 41aa1335ca852e87493b5075b09b3930 489 SUPERFAMILY SSF56349 98 384 7.65E-45 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_3269 a7064ad55fd822e8c180ab5ac429484b 328 SUPERFAMILY SSF161098 95 305 4.58E-14 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3269 a7064ad55fd822e8c180ab5ac429484b 328 Gene3D G3DSA:1.10.3720.10 90 315 6.1E-17 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3269 a7064ad55fd822e8c180ab5ac429484b 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 322 1.5E-39 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 Gene3D G3DSA:3.40.50.10490 94 289 1.3E-151 T 13-10-2018 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 482 499 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 Pfam PF00342 Phosphoglucose isomerase 53 511 1.8E-124 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 SUPERFAMILY SSF53697 32 518 4.64E-145 T 13-10-2018 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 42 509 36.036 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 Gene3D G3DSA:3.40.50.10490 31 491 1.3E-151 T 13-10-2018 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 146 165 2.8E-42 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 482 495 2.8E-42 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 450 468 2.8E-42 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 2.8E-42 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 468 482 2.8E-42 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 PRINTS PR00662 Glucose-6-phosphate isomerase signature 258 276 2.8E-42 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2249 139b9ec996d2f7b78636fefa63d6afb7 524 Gene3D G3DSA:1.10.1390.10 492 519 7.1E-6 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_3782 bb2b2caa052d87b9dce37ba2df230dab 366 Gene3D G3DSA:3.90.650.10 171 364 7.0E-45 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TREPR_3782 bb2b2caa052d87b9dce37ba2df230dab 366 SUPERFAMILY SSF56042 171 363 5.98E-43 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TREPR_3782 bb2b2caa052d87b9dce37ba2df230dab 366 Gene3D G3DSA:3.30.1330.10 1 170 8.0E-62 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TREPR_3782 bb2b2caa052d87b9dce37ba2df230dab 366 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 1 365 42.2 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_3782 bb2b2caa052d87b9dce37ba2df230dab 366 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 364 5.1E-24 T 13-10-2018 IPR010918 PurM-like, C-terminal domain TREPR_3782 bb2b2caa052d87b9dce37ba2df230dab 366 SUPERFAMILY SSF55326 2 170 1.92E-43 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TREPR_3782 bb2b2caa052d87b9dce37ba2df230dab 366 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 1 285 8.2E-103 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_3782 bb2b2caa052d87b9dce37ba2df230dab 366 Pfam PF00586 AIR synthase related protein, N-terminal domain 76 164 3.8E-15 T 13-10-2018 IPR016188 PurM-like, N-terminal domain TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 13-10-2018 TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.6E-27 T 13-10-2018 TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 SUPERFAMILY SSF47413 2 58 9.72E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 8.5E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 Gene3D G3DSA:3.40.50.2300 162 327 1.4E-62 T 13-10-2018 TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 SUPERFAMILY SSF53822 63 334 6.34E-58 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 Gene3D G3DSA:1.10.260.40 1 59 2.1E-21 T 13-10-2018 TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 Gene3D G3DSA:3.40.50.2300 64 322 1.4E-62 T 13-10-2018 TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 9.3E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 9.3E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0265 26dff1f0ebc024cbb975368df050f642 341 SMART SM00354 3 73 4.6E-26 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 Pfam PF01476 LysM domain 353 396 2.2E-9 T 13-10-2018 IPR018392 LysM domain TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 Pfam PF01476 LysM domain 420 463 7.9E-8 T 13-10-2018 IPR018392 LysM domain TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 Gene3D G3DSA:3.10.350.10 351 396 3.9E-13 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 Gene3D G3DSA:3.10.350.10 405 466 8.3E-11 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 SUPERFAMILY SSF54106 419 463 4.45E-8 T 13-10-2018 TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 SUPERFAMILY SSF54106 351 396 3.01E-8 T 13-10-2018 TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 SMART SM00257 352 396 7.6E-13 T 13-10-2018 IPR018392 LysM domain TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 SMART SM00257 419 463 1.3E-7 T 13-10-2018 IPR018392 LysM domain TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 SUPERFAMILY SSF53955 105 266 3.04E-29 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 Pfam PF01464 Transglycosylase SLT domain 133 237 4.8E-20 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 TREPR_1535 eeaf5fe983a95d766daeacb31e805034 466 Gene3D G3DSA:1.10.530.10 121 268 3.7E-23 T 13-10-2018 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 PRINTS PR01182 Ornithine decarboxylase signature 331 341 9.7E-18 T 13-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 PRINTS PR01182 Ornithine decarboxylase signature 125 147 9.7E-18 T 13-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 PRINTS PR01182 Ornithine decarboxylase signature 51 78 9.7E-18 T 13-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 PRINTS PR01182 Ornithine decarboxylase signature 95 119 9.7E-18 T 13-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 270 367 4.5E-17 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 215 228 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 73 85 1.3E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 176 189 1.3E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 53 71 1.3E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 260 279 1.3E-19 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 Gene3D G3DSA:2.40.37.10 23 381 1.5E-98 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 Gene3D G3DSA:3.20.20.10 32 272 1.5E-98 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 SUPERFAMILY SSF51419 24 272 3.11E-65 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 SUPERFAMILY SSF50621 245 387 1.57E-34 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TREPR_3147 ba1fee729af15f4ae1379cd855378993 389 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 269 7.4E-52 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TREPR_0303 1ab3a3fa10c13a326071dfd75b12c088 477 Pfam PF00753 Metallo-beta-lactamase superfamily 29 87 1.7E-10 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_0303 1ab3a3fa10c13a326071dfd75b12c088 477 SMART SM01027 265 391 4.3E-53 T 13-10-2018 IPR022712 Beta-Casp domain TREPR_0303 1ab3a3fa10c13a326071dfd75b12c088 477 Pfam PF10996 Beta-Casp domain 265 391 6.8E-25 T 13-10-2018 IPR022712 Beta-Casp domain TREPR_0303 1ab3a3fa10c13a326071dfd75b12c088 477 Gene3D G3DSA:3.60.15.10 17 453 1.9E-136 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_0303 1ab3a3fa10c13a326071dfd75b12c088 477 Gene3D G3DSA:3.40.50.10890 233 417 1.9E-136 T 13-10-2018 TREPR_0303 1ab3a3fa10c13a326071dfd75b12c088 477 SMART SM00849 24 260 8.9E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_0303 1ab3a3fa10c13a326071dfd75b12c088 477 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 406 464 3.0E-12 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain TREPR_0303 1ab3a3fa10c13a326071dfd75b12c088 477 SUPERFAMILY SSF56281 12 476 9.98E-120 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_1246 469b52a02d4ac4022119809026cc99f3 250 Pfam PF00881 Nitroreductase family 66 231 1.8E-32 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_1246 469b52a02d4ac4022119809026cc99f3 250 Gene3D G3DSA:3.40.109.10 58 232 2.0E-42 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_1246 469b52a02d4ac4022119809026cc99f3 250 SUPERFAMILY SSF55469 60 247 1.02E-36 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 485 49.854 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 Gene3D G3DSA:2.40.50.140 413 487 6.9E-7 T 13-10-2018 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 SUPERFAMILY SSF102114 173 402 1.83E-49 T 13-10-2018 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 Pfam PF04055 Radical SAM superfamily 179 355 1.6E-19 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 175 425 3.5E-78 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 SMART SM00729 174 398 2.1E-39 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 Gene3D G3DSA:3.40.50.12160 10 123 3.9E-29 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 Pfam PF00919 Uncharacterized protein family UPF0004 11 104 7.6E-25 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 15 480 4.7E-114 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 178 198 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TREPR_1193 21334973a26ebd14540e1987b87b15d6 488 Gene3D G3DSA:3.80.30.20 174 412 1.9E-75 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TREPR_3266 8d0d6cda06e1f1e43670e972c1c37be8 223 SUPERFAMILY SSF52540 3 217 1.44E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3266 8d0d6cda06e1f1e43670e972c1c37be8 223 Gene3D G3DSA:3.40.50.300 2 223 4.7E-49 T 13-10-2018 TREPR_3266 8d0d6cda06e1f1e43670e972c1c37be8 223 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3266 8d0d6cda06e1f1e43670e972c1c37be8 223 SMART SM00382 30 199 8.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3266 8d0d6cda06e1f1e43670e972c1c37be8 223 Pfam PF00005 ABC transporter 21 168 4.0E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3071 f18dca80790a09b866eb1615915ee2d6 647 Gene3D G3DSA:2.40.50.570 136 206 1.9E-6 T 13-10-2018 TREPR_3071 f18dca80790a09b866eb1615915ee2d6 647 Gene3D G3DSA:3.10.20.30 4 98 1.0E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily TREPR_3071 f18dca80790a09b866eb1615915ee2d6 647 SUPERFAMILY SSF53067 227 571 2.81E-7 T 13-10-2018 TREPR_3071 f18dca80790a09b866eb1615915ee2d6 647 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 86 3.5E-10 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TREPR_3071 f18dca80790a09b866eb1615915ee2d6 647 Gene3D G3DSA:3.30.420.480 224 398 5.4E-52 T 13-10-2018 TREPR_3071 f18dca80790a09b866eb1615915ee2d6 647 SUPERFAMILY SSF54292 5 96 5.39E-21 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TREPR_3071 f18dca80790a09b866eb1615915ee2d6 647 Pfam PF14574 Domain of unknown function (DUF4445) 226 636 3.0E-133 T 13-10-2018 IPR027980 Protein of unknown function DUF4445 TREPR_1442 8e413cda0c1378ad7501c3927ad646ec 435 Pfam PF13416 Bacterial extracellular solute-binding protein 57 358 1.7E-25 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_1442 8e413cda0c1378ad7501c3927ad646ec 435 Gene3D G3DSA:3.40.190.10 150 420 4.4E-71 T 13-10-2018 TREPR_1442 8e413cda0c1378ad7501c3927ad646ec 435 SUPERFAMILY SSF53850 29 426 1.22E-59 T 13-10-2018 TREPR_1442 8e413cda0c1378ad7501c3927ad646ec 435 Gene3D G3DSA:3.40.190.10 55 386 4.4E-71 T 13-10-2018 TREPR_1343 2881a765f4aaff6c97bd13c30030d35a 613 Pfam PF02368 Bacterial Ig-like domain (group 2) 434 511 1.0E-15 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_1343 2881a765f4aaff6c97bd13c30030d35a 613 SUPERFAMILY SSF49373 432 513 8.63E-19 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments TREPR_1343 2881a765f4aaff6c97bd13c30030d35a 613 SMART SM00635 433 508 7.3E-12 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_1343 2881a765f4aaff6c97bd13c30030d35a 613 Gene3D G3DSA:2.60.40.1080 430 515 3.7E-23 T 13-10-2018 TREPR_3722 6e9315c918e9268834806ad2511b0548 348 SMART SM00062 117 341 1.3E-57 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_3722 6e9315c918e9268834806ad2511b0548 348 SUPERFAMILY SSF53850 80 341 3.09E-61 T 13-10-2018 TREPR_3722 6e9315c918e9268834806ad2511b0548 348 Gene3D G3DSA:3.40.190.10 206 299 1.4E-62 T 13-10-2018 TREPR_3722 6e9315c918e9268834806ad2511b0548 348 Gene3D G3DSA:3.40.190.10 115 333 1.4E-62 T 13-10-2018 TREPR_3722 6e9315c918e9268834806ad2511b0548 348 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 119 339 1.1E-55 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_3560 a6d096ea42bc729a666ae5b626660a8a 122 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 119 3.4E-41 T 13-10-2018 IPR009387 Toxin HigB-2 TREPR_3560 a6d096ea42bc729a666ae5b626660a8a 122 PIRSF PIRSF018634 1 121 5.4E-40 T 13-10-2018 IPR009387 Toxin HigB-2 TREPR_3411 30253e76c8fbec5cff56524c69a38595 629 Gene3D G3DSA:3.30.450.20 191 288 2.9E-5 T 13-10-2018 TREPR_3411 30253e76c8fbec5cff56524c69a38595 629 Gene3D G3DSA:3.30.70.1230 380 587 3.2E-61 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_3411 30253e76c8fbec5cff56524c69a38595 629 SUPERFAMILY SSF55073 381 580 3.61E-53 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_3411 30253e76c8fbec5cff56524c69a38595 629 SUPERFAMILY SSF158472 313 359 1.83E-6 T 13-10-2018 TREPR_3411 30253e76c8fbec5cff56524c69a38595 629 Gene3D G3DSA:1.10.8.500 311 361 1.9E-8 T 13-10-2018 TREPR_3411 30253e76c8fbec5cff56524c69a38595 629 Pfam PF00672 HAMP domain 313 359 1.3E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_3411 30253e76c8fbec5cff56524c69a38595 629 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 389 576 2.9E-30 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_3411 30253e76c8fbec5cff56524c69a38595 629 SMART SM00044 353 561 2.4E-14 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_2778 fc0285a7640cd779321f6a3cf12293c2 100 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 6.8E-25 T 13-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system TREPR_2778 fc0285a7640cd779321f6a3cf12293c2 100 Gene3D G3DSA:3.10.450.530 1 84 4.3E-16 T 13-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily TREPR_0875 e1fb32adfbf4a830ac9989892b7d0d6c 581 Pfam PF13306 Leucine rich repeats (6 copies) 447 531 6.1E-10 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_0875 e1fb32adfbf4a830ac9989892b7d0d6c 581 Gene3D G3DSA:3.80.10.10 384 560 3.5E-19 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0084 f51389133d0dad9150377952faaf01c2 389 Gene3D G3DSA:3.40.190.10 72 359 6.5E-32 T 13-10-2018 TREPR_0084 f51389133d0dad9150377952faaf01c2 389 SUPERFAMILY SSF53850 55 376 1.19E-48 T 13-10-2018 TREPR_0084 f51389133d0dad9150377952faaf01c2 389 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 161 178 - T 13-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 TREPR_0084 f51389133d0dad9150377952faaf01c2 389 Pfam PF13416 Bacterial extracellular solute-binding protein 75 353 7.5E-34 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_0084 f51389133d0dad9150377952faaf01c2 389 Gene3D G3DSA:3.40.190.10 166 306 6.5E-32 T 13-10-2018 TREPR_2655 39f6f1b277f3f127869265c76d54a074 432 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 432 46.334 T 13-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_2655 39f6f1b277f3f127869265c76d54a074 432 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 71 8.3E-7 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2655 39f6f1b277f3f127869265c76d54a074 432 Gene3D G3DSA:3.40.50.12240 13 432 7.7E-107 T 13-10-2018 TREPR_2655 39f6f1b277f3f127869265c76d54a074 432 SUPERFAMILY SSF52540 75 334 5.31E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2655 39f6f1b277f3f127869265c76d54a074 432 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 319 1.0E-45 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1604 801eb0392ec2197f86f3390417e15570 834 Gene3D G3DSA:2.60.40.10 746 834 1.6E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1604 801eb0392ec2197f86f3390417e15570 834 Gene3D G3DSA:2.60.40.10 188 288 1.3E-14 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1604 801eb0392ec2197f86f3390417e15570 834 SUPERFAMILY SSF49303 188 303 6.91E-14 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TREPR_1604 801eb0392ec2197f86f3390417e15570 834 Pfam PF00703 Glycosyl hydrolases family 2 189 303 3.0E-5 T 13-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 TREPR_1604 801eb0392ec2197f86f3390417e15570 834 SUPERFAMILY SSF51445 300 647 4.45E-107 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_1604 801eb0392ec2197f86f3390417e15570 834 Gene3D G3DSA:3.20.20.80 302 645 2.7E-122 T 13-10-2018 TREPR_1604 801eb0392ec2197f86f3390417e15570 834 SUPERFAMILY SSF49303 752 810 2.16E-7 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily TREPR_1604 801eb0392ec2197f86f3390417e15570 834 Gene3D G3DSA:2.60.120.260 3 187 1.3E-52 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily TREPR_1604 801eb0392ec2197f86f3390417e15570 834 SUPERFAMILY SSF49785 3 184 1.87E-44 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily TREPR_1519 00765f6754770102c232b099d1ccb160 502 Pfam PF00005 ABC transporter 20 170 6.1E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1519 00765f6754770102c232b099d1ccb160 502 SUPERFAMILY SSF52540 3 231 3.22E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1519 00765f6754770102c232b099d1ccb160 502 Gene3D G3DSA:3.40.50.300 1 239 4.8E-51 T 13-10-2018 TREPR_1519 00765f6754770102c232b099d1ccb160 502 Pfam PF00005 ABC transporter 269 422 2.6E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1519 00765f6754770102c232b099d1ccb160 502 SUPERFAMILY SSF52540 267 483 4.18E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1519 00765f6754770102c232b099d1ccb160 502 SMART SM00382 277 471 2.0E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1519 00765f6754770102c232b099d1ccb160 502 SMART SM00382 29 218 0.0011 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1519 00765f6754770102c232b099d1ccb160 502 Gene3D G3DSA:3.40.50.300 258 498 3.0E-44 T 13-10-2018 TREPR_1519 00765f6754770102c232b099d1ccb160 502 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2365 8631efb2712fc5b27e54e2d1bdf1b3bb 373 SUPERFAMILY SSF52518 179 364 1.16E-29 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_2365 8631efb2712fc5b27e54e2d1bdf1b3bb 373 Gene3D G3DSA:3.40.50.970 175 355 2.4E-28 T 13-10-2018 TREPR_2365 8631efb2712fc5b27e54e2d1bdf1b3bb 373 SUPERFAMILY SSF52518 3 170 6.38E-22 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_2365 8631efb2712fc5b27e54e2d1bdf1b3bb 373 TIGRFAM TIGR03297 Ppyr-DeCO2ase: phosphonopyruvate decarboxylase 16 369 2.8E-150 T 13-10-2018 IPR017684 Phosphonopyruvate decarboxylase GO:0032923|GO:0033980 KEGG: 00440+4.1.1.82|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7510|MetaCyc: PWY-7769 TREPR_2365 8631efb2712fc5b27e54e2d1bdf1b3bb 373 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 230 343 1.3E-16 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TREPR_2365 8631efb2712fc5b27e54e2d1bdf1b3bb 373 Gene3D G3DSA:3.40.50.970 3 174 5.3E-17 T 13-10-2018 TREPR_2365 8631efb2712fc5b27e54e2d1bdf1b3bb 373 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 9.0E-21 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TREPR_3159 acb3e4e92ce8dbcbed2a66da79a4d847 81 SUPERFAMILY SSF160544 2 78 1.16E-15 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TREPR_3159 acb3e4e92ce8dbcbed2a66da79a4d847 81 Gene3D G3DSA:3.40.1690.10 1 81 3.3E-18 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TREPR_3159 acb3e4e92ce8dbcbed2a66da79a4d847 81 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 75 5.2E-14 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TREPR_1199 11debeb5e49c62887701ac24932072af 612 SUPERFAMILY SSF50156 396 470 3.06E-6 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 TREPR_1199 11debeb5e49c62887701ac24932072af 612 Gene3D G3DSA:2.40.10.10 324 426 4.0E-32 T 13-10-2018 TREPR_1199 11debeb5e49c62887701ac24932072af 612 SUPERFAMILY SSF50494 219 420 5.83E-44 T 13-10-2018 IPR009003 Peptidase S1, PA clan TREPR_1199 11debeb5e49c62887701ac24932072af 612 Gene3D G3DSA:2.40.10.10 212 316 2.6E-13 T 13-10-2018 TREPR_1199 11debeb5e49c62887701ac24932072af 612 PRINTS PR00834 HtrA/DegQ protease family signature 256 268 3.3E-25 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1199 11debeb5e49c62887701ac24932072af 612 PRINTS PR00834 HtrA/DegQ protease family signature 359 376 3.3E-25 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1199 11debeb5e49c62887701ac24932072af 612 PRINTS PR00834 HtrA/DegQ protease family signature 381 398 3.3E-25 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1199 11debeb5e49c62887701ac24932072af 612 PRINTS PR00834 HtrA/DegQ protease family signature 452 464 3.3E-25 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1199 11debeb5e49c62887701ac24932072af 612 PRINTS PR00834 HtrA/DegQ protease family signature 327 351 3.3E-25 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1199 11debeb5e49c62887701ac24932072af 612 Pfam PF13365 Trypsin-like peptidase domain 247 388 8.1E-24 T 13-10-2018 TREPR_2415 2f4218356c8fd260d8a0a1334e126e2d 277 SUPERFAMILY SSF55120 10 274 3.08E-30 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_2415 2f4218356c8fd260d8a0a1334e126e2d 277 Pfam PF00849 RNA pseudouridylate synthase 20 217 3.0E-14 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 Pfam PF00005 ABC transporter 323 477 1.8E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 Gene3D G3DSA:3.40.50.300 600 871 2.1E-73 T 13-10-2018 TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 Gene3D G3DSA:3.40.50.300 302 584 9.7E-73 T 13-10-2018 TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 Gene3D G3DSA:1.10.3720.10 68 264 5.3E-17 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 Pfam PF00005 ABC transporter 629 781 2.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 ProSitePatterns PS00211 ABC transporters family signature. 754 768 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 SUPERFAMILY SSF52540 618 853 2.17E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 SMART SM00382 637 831 4.2E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 SMART SM00382 330 527 9.4E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 SUPERFAMILY SSF52540 302 549 2.56E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 SUPERFAMILY SSF161098 70 247 9.29E-24 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3543 72ced101d3dc0b9cb293cf703b5fe63c 876 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 264 1.7E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2526 149b36d874786cb07ad089a2d2eb2800 96 SMART SM00834 1 41 1.2E-17 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TREPR_2526 149b36d874786cb07ad089a2d2eb2800 96 Pfam PF09723 Zinc ribbon domain 1 40 7.2E-18 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TREPR_2526 149b36d874786cb07ad089a2d2eb2800 96 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.5E-21 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TREPR_1260 516f40303229d819575c650230dcf5ec 754 SUPERFAMILY SSF47384 120 200 7.06E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1260 516f40303229d819575c650230dcf5ec 754 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 198 3.2E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1260 516f40303229d819575c650230dcf5ec 754 Gene3D G3DSA:1.10.287.130 118 196 5.4E-26 T 13-10-2018 TREPR_1260 516f40303229d819575c650230dcf5ec 754 SUPERFAMILY SSF52172 391 533 6.45E-30 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1260 516f40303229d819575c650230dcf5ec 754 SMART SM00448 392 528 3.7E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1260 516f40303229d819575c650230dcf5ec 754 Pfam PF00072 Response regulator receiver domain 395 463 6.4E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1260 516f40303229d819575c650230dcf5ec 754 SUPERFAMILY SSF55874 187 360 2.62E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1260 516f40303229d819575c650230dcf5ec 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 358 1.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1260 516f40303229d819575c650230dcf5ec 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 1.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1260 516f40303229d819575c650230dcf5ec 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 1.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1260 516f40303229d819575c650230dcf5ec 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 314 1.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1260 516f40303229d819575c650230dcf5ec 754 SUPERFAMILY SSF47226 511 653 6.15E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1260 516f40303229d819575c650230dcf5ec 754 Gene3D G3DSA:3.30.565.10 197 364 9.3E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1260 516f40303229d819575c650230dcf5ec 754 Gene3D G3DSA:3.40.50.2300 387 532 4.3E-38 T 13-10-2018 TREPR_1260 516f40303229d819575c650230dcf5ec 754 SMART SM00387 245 361 1.8E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1260 516f40303229d819575c650230dcf5ec 754 Pfam PF01627 Hpt domain 579 639 3.9E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1260 516f40303229d819575c650230dcf5ec 754 SMART SM00388 133 198 2.2E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1260 516f40303229d819575c650230dcf5ec 754 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 245 360 1.0E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1260 516f40303229d819575c650230dcf5ec 754 Gene3D G3DSA:1.20.120.160 560 663 5.7E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 SMART SM00304 342 395 9.9E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Pfam PF00672 HAMP domain 342 391 8.5E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 SMART SM00388 403 468 4.0E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 SUPERFAMILY SSF158472 342 392 4.84E-11 T 13-10-2018 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 SMART SM00387 515 633 1.0E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Gene3D G3DSA:3.30.565.10 469 632 3.0E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 626 7.1E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Gene3D G3DSA:3.30.450.20 63 208 2.3E-68 T 13-10-2018 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Pfam PF00512 His Kinase A (phospho-acceptor) domain 403 468 1.9E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Pfam PF02743 Cache domain 46 305 1.7E-25 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Gene3D G3DSA:1.20.1480.50 309 402 9.1E-20 T 13-10-2018 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 SUPERFAMILY SSF52172 678 803 3.27E-38 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Pfam PF00072 Response regulator receiver domain 683 797 1.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Gene3D G3DSA:3.40.50.12740 680 808 4.5E-44 T 13-10-2018 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 584 3.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 609 3.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 628 3.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 570 3.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Gene3D G3DSA:1.10.287.130 408 468 9.9E-17 T 13-10-2018 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 SMART SM00448 681 800 9.1E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 SUPERFAMILY SSF47384 386 469 6.87E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 Gene3D G3DSA:3.30.450.20 50 308 2.3E-68 T 13-10-2018 TREPR_2903 16ba45e47830330d747bae046264ba0f 808 SUPERFAMILY SSF55874 457 626 1.7E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2014 2d9fae5af8051e28057b6980fbc0f755 396 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 19 367 5.6E-38 T 13-10-2018 IPR006427 Phage portal protein, HK97 TREPR_2014 2d9fae5af8051e28057b6980fbc0f755 396 Pfam PF04860 Phage portal protein 28 360 3.0E-57 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 Pfam PF04434 SWIM zinc finger 118 140 7.1E-7 T 13-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 SMART SM00487 754 938 4.9E-37 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 Pfam PF00176 SNF2 family N-terminal domain 777 1035 3.7E-49 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 Gene3D G3DSA:3.40.50.10810 734 964 1.7E-61 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 Pfam PF00271 Helicase conserved C-terminal domain 1053 1162 1.1E-17 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 Pfam PF12419 SNF2 Helicase protein 597 718 5.1E-27 T 13-10-2018 IPR022138 Helicase SWF/SNF-related TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 SUPERFAMILY SSF52540 742 965 1.32E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 Gene3D G3DSA:3.40.50.300 974 1176 3.5E-80 T 13-10-2018 TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 SUPERFAMILY SSF52540 968 1217 7.22E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 SMART SM00490 1078 1162 3.6E-21 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1019 1f9ef65b1eb2112ad695abbda800bba0 1218 Gene3D G3DSA:1.20.120.850 989 1212 3.5E-80 T 13-10-2018 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 371 574 1.9E-20 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 SMART SM00382 381 566 2.5E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 SMART SM00959 217 261 1.0E-5 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 SUPERFAMILY SSF52540 305 582 7.57E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 Pfam PF07498 Rho termination factor, N-terminal domain 218 261 1.9E-8 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 Gene3D G3DSA:1.10.720.10 212 260 2.0E-8 T 13-10-2018 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 Hamap MF_01884 Transcription termination factor Rho [rho]. 213 631 218.415 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 Gene3D G3DSA:2.40.50.140 261 337 8.4E-32 T 13-10-2018 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 TIGRFAM TIGR00767 rho: transcription termination factor Rho 214 628 6.7E-213 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 SMART SM00357 266 332 8.3E-16 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 SUPERFAMILY SSF50249 263 338 2.06E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 Pfam PF07497 Rho termination factor, RNA-binding domain 267 338 5.2E-29 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 TREPR_2580 e438f6e060f0a345bfb03503c7e2724f 635 Gene3D G3DSA:3.40.50.300 344 628 1.1E-123 T 13-10-2018 TREPR_1269 6f449929cecf215c01672710e9a98b11 274 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 255 35.795 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1269 6f449929cecf215c01672710e9a98b11 274 Gene3D G3DSA:3.90.226.10 4 257 1.1E-78 T 13-10-2018 TREPR_1269 6f449929cecf215c01672710e9a98b11 274 SUPERFAMILY SSF52096 15 255 1.89E-70 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TREPR_1269 6f449929cecf215c01672710e9a98b11 274 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 137 155 6.5E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1269 6f449929cecf215c01672710e9a98b11 274 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 214 6.5E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1269 6f449929cecf215c01672710e9a98b11 274 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 174 191 6.5E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1269 6f449929cecf215c01672710e9a98b11 274 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 103 117 6.5E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1269 6f449929cecf215c01672710e9a98b11 274 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 225 234 6.5E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_1269 6f449929cecf215c01672710e9a98b11 274 Pfam PF01039 Carboxyl transferase domain 37 211 2.3E-15 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TREPR_2330 02e55db7e249229f083a972e8f14c03d 816 Pfam PF04055 Radical SAM superfamily 252 408 2.2E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_2330 02e55db7e249229f083a972e8f14c03d 816 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 624 723 6.8E-28 T 13-10-2018 IPR018768 Domain of unknown function DUF2344 TREPR_2330 02e55db7e249229f083a972e8f14c03d 816 Gene3D G3DSA:3.80.30.20 247 474 1.4E-17 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TREPR_2330 02e55db7e249229f083a972e8f14c03d 816 SUPERFAMILY SSF102114 247 523 3.53E-32 T 13-10-2018 TREPR_2330 02e55db7e249229f083a972e8f14c03d 816 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 624 742 5.9E-26 T 13-10-2018 IPR018768 Domain of unknown function DUF2344 TREPR_2330 02e55db7e249229f083a972e8f14c03d 816 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 13 579 1.5E-141 T 13-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM TREPR_2330 02e55db7e249229f083a972e8f14c03d 816 SMART SM00729 248 465 9.2E-17 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 SUPERFAMILY SSF52172 691 818 1.39E-33 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Pfam PF01627 Hpt domain 859 938 3.9E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Pfam PF02743 Cache domain 44 275 1.8E-16 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Gene3D G3DSA:1.10.287.130 308 387 1.9E-24 T 13-10-2018 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Gene3D G3DSA:3.30.450.20 96 184 1.5E-25 T 13-10-2018 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 SUPERFAMILY SSF103190 117 194 1.18E-6 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 SUPERFAMILY SSF55874 378 548 5.11E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 SMART SM00448 690 807 2.2E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 436 548 1.9E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Gene3D G3DSA:3.30.450.20 185 277 1.5E-25 T 13-10-2018 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 SUPERFAMILY SSF47384 311 390 4.71E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Pfam PF00072 Response regulator receiver domain 692 807 3.3E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 SUPERFAMILY SSF47226 839 948 2.09E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Gene3D G3DSA:3.30.565.10 388 553 8.0E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 SMART SM00387 436 552 1.1E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Pfam PF00512 His Kinase A (phospho-acceptor) domain 324 389 5.5E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 SMART SM00388 324 389 5.3E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 530 5.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 549 5.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 491 5.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Gene3D G3DSA:3.40.50.2300 690 834 5.4E-37 T 13-10-2018 TREPR_1710 0553e9b5a5c2a3ffcdf0d6299577f275 1029 Gene3D G3DSA:1.20.120.160 842 948 3.7E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_3777 bafb6157ae9298433e0767f14fd9b7ce 325 TIGRFAM TIGR00433 bioB: biotin synthase 26 319 8.7E-95 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TREPR_3777 bafb6157ae9298433e0767f14fd9b7ce 325 Hamap MF_01694 Biotin synthase [bioB]. 12 321 35.242 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TREPR_3777 bafb6157ae9298433e0767f14fd9b7ce 325 SUPERFAMILY SSF102114 13 318 8.63E-59 T 13-10-2018 TREPR_3777 bafb6157ae9298433e0767f14fd9b7ce 325 PIRSF PIRSF001619 3 324 2.2E-90 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TREPR_3777 bafb6157ae9298433e0767f14fd9b7ce 325 SMART SM00876 228 320 8.9E-21 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TREPR_3777 bafb6157ae9298433e0767f14fd9b7ce 325 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 228 319 1.5E-11 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TREPR_3777 bafb6157ae9298433e0767f14fd9b7ce 325 SMART SM00729 52 259 3.8E-28 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_3777 bafb6157ae9298433e0767f14fd9b7ce 325 Gene3D G3DSA:3.20.20.70 14 322 3.1E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3777 bafb6157ae9298433e0767f14fd9b7ce 325 Pfam PF04055 Radical SAM superfamily 61 215 2.1E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_1395 6819f0c3e7436ce86f3bde47e60aa0a0 351 Gene3D G3DSA:1.20.81.30 204 314 1.4E-14 T 13-10-2018 TREPR_1395 6819f0c3e7436ce86f3bde47e60aa0a0 351 Gene3D G3DSA:1.20.81.30 2 118 2.7E-20 T 13-10-2018 TREPR_1395 6819f0c3e7436ce86f3bde47e60aa0a0 351 PRINTS PR00812 Bacterial general secretion pathway protein F signature 331 350 8.2E-10 T 13-10-2018 IPR003004 GspF/PilC family TREPR_1395 6819f0c3e7436ce86f3bde47e60aa0a0 351 PRINTS PR00812 Bacterial general secretion pathway protein F signature 111 139 8.2E-10 T 13-10-2018 IPR003004 GspF/PilC family TREPR_1395 6819f0c3e7436ce86f3bde47e60aa0a0 351 PRINTS PR00812 Bacterial general secretion pathway protein F signature 315 329 8.2E-10 T 13-10-2018 IPR003004 GspF/PilC family TREPR_1395 6819f0c3e7436ce86f3bde47e60aa0a0 351 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 111 139 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 TREPR_1395 6819f0c3e7436ce86f3bde47e60aa0a0 351 Pfam PF00482 Type II secretion system (T2SS), protein F 12 139 1.2E-16 T 13-10-2018 IPR018076 Type II secretion system F domain TREPR_1395 6819f0c3e7436ce86f3bde47e60aa0a0 351 Pfam PF00482 Type II secretion system (T2SS), protein F 224 342 2.9E-18 T 13-10-2018 IPR018076 Type II secretion system F domain TREPR_2171 0795fa517331b8ca28b025a18401cecd 109 SUPERFAMILY SSF50118 1 107 1.74E-14 T 13-10-2018 TREPR_2171 0795fa517331b8ca28b025a18401cecd 109 Gene3D G3DSA:2.30.30.110 13 109 9.9E-19 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TREPR_2171 0795fa517331b8ca28b025a18401cecd 109 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 104 1.7E-11 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 375 7.8E-132 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 Pfam PF06071 Protein of unknown function (DUF933) 291 374 1.8E-39 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 Gene3D G3DSA:3.40.50.300 3 290 3.2E-138 T 13-10-2018 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 SUPERFAMILY SSF52540 3 312 2.16E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 PIRSF PIRSF006641 1 375 2.0E-145 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 SUPERFAMILY SSF81271 291 372 4.58E-35 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 375 40.746 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 Gene3D G3DSA:3.10.20.30 48 373 3.2E-138 T 13-10-2018 IPR012675 Beta-grasp domain superfamily TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 Gene3D G3DSA:1.10.150.300 113 204 3.2E-138 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 9.3E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.3E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 9.3E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 9.3E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_1069 3dd2d795813064cf8dd2e0ec205de346 375 Pfam PF01926 50S ribosome-binding GTPase 5 120 8.4E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_2398 bde7b8325dfb48a66a6139de50c11d19 435 Gene3D G3DSA:3.90.550.10 1 240 1.1E-61 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2398 bde7b8325dfb48a66a6139de50c11d19 435 SUPERFAMILY SSF53448 1 236 4.12E-59 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2398 bde7b8325dfb48a66a6139de50c11d19 435 Pfam PF00483 Nucleotidyl transferase 2 232 7.5E-27 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TREPR_2398 bde7b8325dfb48a66a6139de50c11d19 435 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 247 397 6.3E-34 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 TREPR_2398 bde7b8325dfb48a66a6139de50c11d19 435 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 247 399 7.7E-27 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 TREPR_2398 bde7b8325dfb48a66a6139de50c11d19 435 Gene3D G3DSA:3.40.50.1000 243 429 2.3E-53 T 13-10-2018 IPR023214 HAD superfamily TREPR_2398 bde7b8325dfb48a66a6139de50c11d19 435 SUPERFAMILY SSF56784 244 427 6.07E-40 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_2398 bde7b8325dfb48a66a6139de50c11d19 435 Pfam PF13242 HAD-hyrolase-like 353 407 1.1E-9 T 13-10-2018 TREPR_2605 6b3256231ff270d0cf71912a2f6aa2ea 661 Gene3D G3DSA:3.40.50.300 118 308 2.9E-65 T 13-10-2018 TREPR_2605 6b3256231ff270d0cf71912a2f6aa2ea 661 SMART SM00490 423 520 3.1E-4 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2605 6b3256231ff270d0cf71912a2f6aa2ea 661 SMART SM00487 128 326 2.2E-19 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2605 6b3256231ff270d0cf71912a2f6aa2ea 661 SUPERFAMILY SSF52540 151 529 2.42E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2605 6b3256231ff270d0cf71912a2f6aa2ea 661 Pfam PF00270 DEAD/DEAH box helicase 156 294 5.4E-12 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_2605 6b3256231ff270d0cf71912a2f6aa2ea 661 Hamap MF_00983 Probable primosomal protein N' [priA]. 12 660 23.383 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TREPR_2605 6b3256231ff270d0cf71912a2f6aa2ea 661 TIGRFAM TIGR00595 priA: primosomal protein N' 154 658 4.1E-179 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TREPR_2605 6b3256231ff270d0cf71912a2f6aa2ea 661 Pfam PF00271 Helicase conserved C-terminal domain 453 519 6.8E-6 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2605 6b3256231ff270d0cf71912a2f6aa2ea 661 Gene3D G3DSA:1.10.8.630 7 116 5.3E-24 T 13-10-2018 TREPR_3214 7e8c196c612eb08954798fd27fab6123 401 Gene3D G3DSA:1.20.1250.20 214 401 4.5E-16 T 13-10-2018 TREPR_3214 7e8c196c612eb08954798fd27fab6123 401 SUPERFAMILY SSF103473 19 399 1.57E-29 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_3214 7e8c196c612eb08954798fd27fab6123 401 Gene3D G3DSA:1.20.1250.20 15 207 3.2E-8 T 13-10-2018 TREPR_3214 7e8c196c612eb08954798fd27fab6123 401 Pfam PF07690 Major Facilitator Superfamily 226 393 1.1E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TREPR_3778 863492631252a33c645d8bfa54373470 553 SUPERFAMILY SSF53927 209 553 2.81E-100 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TREPR_3778 863492631252a33c645d8bfa54373470 553 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 553 39.105 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3778 863492631252a33c645d8bfa54373470 553 Gene3D G3DSA:3.40.140.20 205 387 5.4E-49 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3778 863492631252a33c645d8bfa54373470 553 SUPERFAMILY SSF52335 2 190 1.7E-62 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TREPR_3778 863492631252a33c645d8bfa54373470 553 Pfam PF02142 MGS-like domain 14 128 1.5E-23 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain TREPR_3778 863492631252a33c645d8bfa54373470 553 Gene3D G3DSA:3.40.50.1380 1 195 1.5E-81 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TREPR_3778 863492631252a33c645d8bfa54373470 553 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 470 2.0E-101 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3778 863492631252a33c645d8bfa54373470 553 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 553 2.2E-159 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3778 863492631252a33c645d8bfa54373470 553 Gene3D G3DSA:3.40.140.20 402 553 1.1E-47 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3778 863492631252a33c645d8bfa54373470 553 SMART SM00798 133 471 4.0E-153 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3778 863492631252a33c645d8bfa54373470 553 SMART SM00851 14 128 6.9E-51 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain TREPR_3778 863492631252a33c645d8bfa54373470 553 PIRSF PIRSF000414 1 271 1.8E-92 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3778 863492631252a33c645d8bfa54373470 553 PIRSF PIRSF000414 287 553 1.3E-88 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 Gene3D G3DSA:3.80.10.10 403 552 3.2E-35 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SUPERFAMILY SSF52058 46 243 6.12E-28 T 13-10-2018 TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SMART SM00369 296 318 66.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SMART SM00369 442 464 29.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SMART SM00369 511 534 0.97 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SMART SM00369 212 235 98.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SMART SM00369 419 440 58.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SMART SM00369 465 488 19.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SMART SM00369 342 364 22.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SMART SM00369 365 389 100.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SMART SM00369 319 341 45.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 SUPERFAMILY SSF52058 245 546 4.08E-56 T 13-10-2018 TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 Pfam PF13855 Leucine rich repeat 467 524 7.1E-8 T 13-10-2018 IPR001611 Leucine-rich repeat GO:0005515 TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 Pfam PF13855 Leucine rich repeat 298 353 5.5E-9 T 13-10-2018 IPR001611 Leucine-rich repeat GO:0005515 TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 Gene3D G3DSA:3.80.10.10 13 244 4.0E-36 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0811 15efb8aa12a217fba3461e970c10af58 570 Gene3D G3DSA:3.80.10.10 245 402 4.7E-35 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 SMART SM00028 260 293 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 SMART SM00028 124 157 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 SMART SM00028 85 118 71.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 SMART SM00028 158 191 3.5E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 SMART SM00028 298 331 56.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 SMART SM00028 192 225 1.9E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 170 250 1.8E-11 T 13-10-2018 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 Pfam PF04471 Restriction endonuclease 404 469 5.1E-6 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 Gene3D G3DSA:1.25.40.10 68 160 2.2E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 SUPERFAMILY SSF48452 124 289 6.26E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2926 c24ecc8c83c0044574a8c816e310bdcd 488 Gene3D G3DSA:1.25.40.10 161 351 5.9E-29 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1179 4934629e5dd0b421cac2b4fe3af1ecf0 349 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 335 28.29 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TREPR_1179 4934629e5dd0b421cac2b4fe3af1ecf0 349 Gene3D G3DSA:3.40.50.170 1 218 3.9E-57 T 13-10-2018 TREPR_1179 4934629e5dd0b421cac2b4fe3af1ecf0 349 SUPERFAMILY SSF50486 218 339 6.44E-25 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 TREPR_1179 4934629e5dd0b421cac2b4fe3af1ecf0 349 SUPERFAMILY SSF53328 2 215 1.83E-45 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TREPR_1179 4934629e5dd0b421cac2b4fe3af1ecf0 349 Pfam PF02911 Formyl transferase, C-terminal domain 218 332 2.2E-24 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TREPR_1179 4934629e5dd0b421cac2b4fe3af1ecf0 349 Gene3D G3DSA:3.10.25.10 220 340 1.2E-29 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TREPR_1179 4934629e5dd0b421cac2b4fe3af1ecf0 349 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 334 3.7E-73 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TREPR_1179 4934629e5dd0b421cac2b4fe3af1ecf0 349 Pfam PF00551 Formyl transferase 25 193 6.9E-28 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 Gene3D G3DSA:3.40.50.300 415 635 5.1E-32 T 13-10-2018 TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 SMART SM00490 522 610 1.6E-4 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 SUPERFAMILY SSF53335 795 1231 7.52E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 Pfam PF13156 Restriction endonuclease 34 169 9.9E-41 T 13-10-2018 IPR039442 Mrr-like domain TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1058 1070 4.7E-7 T 13-10-2018 TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 882 898 4.7E-7 T 13-10-2018 TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 917 931 4.7E-7 T 13-10-2018 TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 SUPERFAMILY SSF52980 21 157 3.0E-6 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 SMART SM00487 176 410 1.1E-10 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 SUPERFAMILY SSF52540 195 621 1.09E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 Pfam PF04851 Type III restriction enzyme, res subunit 178 381 2.7E-27 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 Pfam PF00271 Helicase conserved C-terminal domain 493 609 2.8E-7 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 1061 1067 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_2024 f06266baac26bcbb937a85e5072832a0 1666 Gene3D G3DSA:3.40.50.150 861 1362 2.6E-36 T 13-10-2018 TREPR_2508 8c01a7f9fb90313cc77f70d16b8e5def 311 SUPERFAMILY SSF161098 57 295 1.05E-55 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2508 8c01a7f9fb90313cc77f70d16b8e5def 311 Gene3D G3DSA:1.10.3720.10 53 309 3.8E-66 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2508 8c01a7f9fb90313cc77f70d16b8e5def 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 299 7.5E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0062 0b633eb6c6dbf8996ecde724f401ec6a 268 Gene3D G3DSA:3.40.1280.10 1 163 6.2E-52 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TREPR_0062 0b633eb6c6dbf8996ecde724f401ec6a 268 PIRSF PIRSF004808 183 259 0.01 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 TREPR_0062 0b633eb6c6dbf8996ecde724f401ec6a 268 PIRSF PIRSF004808 2 171 6.4E-50 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 TREPR_0062 0b633eb6c6dbf8996ecde724f401ec6a 268 Pfam PF00588 SpoU rRNA Methylase family 6 154 2.8E-29 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TREPR_0062 0b633eb6c6dbf8996ecde724f401ec6a 268 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 5 252 1.1E-49 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 TREPR_0062 0b633eb6c6dbf8996ecde724f401ec6a 268 SUPERFAMILY SSF75217 5 160 5.36E-30 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases TREPR_0129 354ecdb51f2a75f52676ebd691c220d2 323 Pfam PF01545 Cation efflux family 30 224 5.2E-40 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TREPR_0129 354ecdb51f2a75f52676ebd691c220d2 323 Gene3D G3DSA:1.20.1510.10 24 224 8.4E-47 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TREPR_0129 354ecdb51f2a75f52676ebd691c220d2 323 SUPERFAMILY SSF161111 23 225 3.4E-46 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TREPR_0129 354ecdb51f2a75f52676ebd691c220d2 323 Pfam PF16916 Dimerisation domain of Zinc Transporter 231 306 8.7E-20 T 13-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain TREPR_0129 354ecdb51f2a75f52676ebd691c220d2 323 SUPERFAMILY SSF160240 230 307 3.53E-17 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TREPR_0129 354ecdb51f2a75f52676ebd691c220d2 323 Gene3D G3DSA:3.30.70.1350 226 308 2.4E-25 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TREPR_0129 354ecdb51f2a75f52676ebd691c220d2 323 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 27 306 3.1E-59 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TREPR_3327 66e0f2c73abffbcb9e293acb77aa4b10 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 268 5.6E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3327 66e0f2c73abffbcb9e293acb77aa4b10 274 Gene3D G3DSA:1.10.3720.10 2 265 1.9E-55 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3327 66e0f2c73abffbcb9e293acb77aa4b10 274 SUPERFAMILY SSF161098 9 274 2.43E-63 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3104 8dbfa7c7a26c84927d77c6e2fd949a3e 266 Pfam PF14337 Domain of unknown function (DUF4393) 72 264 3.6E-62 T 13-10-2018 IPR025506 Protein of unknown function DUF4393 TREPR_3104 8dbfa7c7a26c84927d77c6e2fd949a3e 266 Gene3D G3DSA:1.10.10.2280 121 266 3.7E-10 T 13-10-2018 TREPR_1760 0e626f2b716566767b9672350fd13d10 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 6.5E-37 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1760 0e626f2b716566767b9672350fd13d10 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.423 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1760 0e626f2b716566767b9672350fd13d10 89 SUPERFAMILY SSF47060 3 89 6.47E-32 T 13-10-2018 IPR009068 S15/NS1, RNA-binding TREPR_1760 0e626f2b716566767b9672350fd13d10 89 SMART SM01387 8 88 1.8E-44 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1760 0e626f2b716566767b9672350fd13d10 89 Pfam PF00312 Ribosomal protein S15 10 88 1.9E-34 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1760 0e626f2b716566767b9672350fd13d10 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 4.0E-23 T 13-10-2018 TREPR_1760 0e626f2b716566767b9672350fd13d10 89 Gene3D G3DSA:1.10.287.10 1 89 1.7E-33 T 13-10-2018 TREPR_1358 013691eb84129f6b67ac451b18b802b5 483 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 11 460 2.2E-138 T 13-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 TREPR_1358 013691eb84129f6b67ac451b18b802b5 483 Pfam PF03553 Na+/H+ antiporter family 165 457 3.0E-52 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 TREPR_0730 d6d2d98ab92a81f026c83bf2d13fda56 421 Gene3D G3DSA:3.60.21.10 1 292 1.8E-65 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_0730 d6d2d98ab92a81f026c83bf2d13fda56 421 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 3 245 1.9E-53 T 13-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 TREPR_0730 d6d2d98ab92a81f026c83bf2d13fda56 421 SUPERFAMILY SSF56300 2 244 7.33E-42 T 13-10-2018 TREPR_0730 d6d2d98ab92a81f026c83bf2d13fda56 421 Pfam PF00149 Calcineurin-like phosphoesterase 2 104 2.0E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_3208 bc8d9d357148df4202cae9e845f598ba 209 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 208 3.1E-59 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 TREPR_3208 bc8d9d357148df4202cae9e845f598ba 209 PIRSF PIRSF000495 1 209 4.0E-60 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 TREPR_3208 bc8d9d357148df4202cae9e845f598ba 209 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 209 30.638 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 TREPR_3208 bc8d9d357148df4202cae9e845f598ba 209 Pfam PF00117 Glutamine amidotransferase class-I 4 198 3.1E-19 T 13-10-2018 IPR017926 Glutamine amidotransferase TREPR_3208 bc8d9d357148df4202cae9e845f598ba 209 SUPERFAMILY SSF52317 2 208 6.25E-48 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_3208 bc8d9d357148df4202cae9e845f598ba 209 Gene3D G3DSA:3.40.50.880 1 209 4.4E-68 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_2521 22f20b9132d436cd162f27f8536c18c3 339 Pfam PF13353 4Fe-4S single cluster domain 78 168 1.1E-4 T 13-10-2018 TREPR_2521 22f20b9132d436cd162f27f8536c18c3 339 SUPERFAMILY SSF102114 62 306 3.14E-30 T 13-10-2018 TREPR_2521 22f20b9132d436cd162f27f8536c18c3 339 Pfam PF04055 Radical SAM superfamily 83 230 1.3E-20 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_2521 22f20b9132d436cd162f27f8536c18c3 339 Gene3D G3DSA:3.20.20.70 70 275 9.4E-39 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2521 22f20b9132d436cd162f27f8536c18c3 339 PIRSF PIRSF004869 2 308 6.2E-81 T 13-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted TREPR_2521 22f20b9132d436cd162f27f8536c18c3 339 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 15 337 1.3E-85 T 13-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 11 441 2.0E-198 T 13-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 Gene3D G3DSA:3.20.20.150 9 442 4.0E-168 T 13-10-2018 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 Hamap MF_00455 Xylose isomerase [xylA]. 18 443 50.033 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 SUPERFAMILY SSF51658 10 443 5.91E-154 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 PRINTS PR00688 Xylose isomerase signature 278 305 1.1E-73 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 PRINTS PR00688 Xylose isomerase signature 340 351 1.1E-73 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 PRINTS PR00688 Xylose isomerase signature 163 182 1.1E-73 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 PRINTS PR00688 Xylose isomerase signature 307 318 1.1E-73 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 PRINTS PR00688 Xylose isomerase signature 187 208 1.1E-73 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 PRINTS PR00688 Xylose isomerase signature 214 233 1.1E-73 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 PRINTS PR00688 Xylose isomerase signature 236 260 1.1E-73 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 PRINTS PR00688 Xylose isomerase signature 140 160 1.1E-73 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_2497 44d0ab839656ac1e01bb0d9a8eeedd49 446 PRINTS PR00688 Xylose isomerase signature 99 121 1.1E-73 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 TREPR_0052 0547a247deccfa4d70e874464c34e3d1 607 SMART SM00304 219 273 6.4E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0052 0547a247deccfa4d70e874464c34e3d1 607 SUPERFAMILY SSF58104 332 555 4.05E-46 T 13-10-2018 TREPR_0052 0547a247deccfa4d70e874464c34e3d1 607 Gene3D G3DSA:1.10.287.950 313 605 1.2E-47 T 13-10-2018 TREPR_0052 0547a247deccfa4d70e874464c34e3d1 607 SMART SM00283 316 563 7.1E-49 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0052 0547a247deccfa4d70e874464c34e3d1 607 SUPERFAMILY SSF58104 241 342 1.94E-9 T 13-10-2018 TREPR_0052 0547a247deccfa4d70e874464c34e3d1 607 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 386 530 6.1E-28 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0052 0547a247deccfa4d70e874464c34e3d1 607 Gene3D G3DSA:1.20.1480.50 184 279 4.0E-6 T 13-10-2018 TREPR_2737 0511f64bc532564c634fcbc2fe2cc5cf 158 PIRSF PIRSF008505 1 157 1.9E-48 T 13-10-2018 IPR016541 Uncharacterised conserved protein UCP008505 TREPR_2737 0511f64bc532564c634fcbc2fe2cc5cf 158 Pfam PF14367 Domain of unknown function (DUF4411) 3 157 2.6E-35 T 13-10-2018 IPR016541 Uncharacterised conserved protein UCP008505 TREPR_3292 e07a5ff7f0eff9dfc4552fe34d013918 335 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 209 2.1E-56 T 13-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 TREPR_3292 e07a5ff7f0eff9dfc4552fe34d013918 335 Gene3D G3DSA:1.10.1760.20 1 208 8.0E-58 T 13-10-2018 TREPR_3292 e07a5ff7f0eff9dfc4552fe34d013918 335 Pfam PF13190 PDGLE domain 234 324 1.0E-29 T 13-10-2018 IPR025937 PDGLE domain TREPR_1380 6865b6e2d39de7f263ec71332be03bd6 401 Gene3D G3DSA:1.10.357.10 214 337 3.3E-17 T 13-10-2018 TREPR_1380 6865b6e2d39de7f263ec71332be03bd6 401 Pfam PF00440 Bacterial regulatory proteins, tetR family 6 52 1.9E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1380 6865b6e2d39de7f263ec71332be03bd6 401 Pfam PF00440 Bacterial regulatory proteins, tetR family 230 265 1.7E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1380 6865b6e2d39de7f263ec71332be03bd6 401 SUPERFAMILY SSF46689 2 66 1.12E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_1380 6865b6e2d39de7f263ec71332be03bd6 401 Gene3D G3DSA:1.10.357.10 2 181 4.3E-18 T 13-10-2018 TREPR_1380 6865b6e2d39de7f263ec71332be03bd6 401 SUPERFAMILY SSF46689 219 278 5.99E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3853 bc254e5fd0b8b06a62824368257d61b8 113 SUPERFAMILY SSF47413 7 73 3.75E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3853 bc254e5fd0b8b06a62824368257d61b8 113 SMART SM00530 10 65 2.7E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3853 bc254e5fd0b8b06a62824368257d61b8 113 Pfam PF01381 Helix-turn-helix 11 62 5.3E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3853 bc254e5fd0b8b06a62824368257d61b8 113 Gene3D G3DSA:1.10.260.40 2 72 1.8E-18 T 13-10-2018 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 Gene3D G3DSA:2.130.10.30 94 321 5.6E-29 T 13-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 Gene3D G3DSA:2.130.10.30 326 530 9.4E-40 T 13-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 483 512 3.9E-9 T 13-10-2018 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 185 235 6.9E-7 T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 396 448 4.8E-6 T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 90 164 2.3E-7 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 348 362 6.7E-15 T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 187 203 6.7E-15 T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 495 516 6.7E-15 T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 332 348 6.7E-15 T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 241 257 6.7E-15 T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 441 459 6.7E-15 T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 SUPERFAMILY SSF50985 221 517 4.84E-53 T 13-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 486 496 - T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 TREPR_1057 476a1c66a342c9cfb1ceec3870986999 534 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 127 168 8.5E-7 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_1191 0c51c5afb55cddd7db565a991b35214a 281 Gene3D G3DSA:3.90.1150.10 30 62 2.0E-8 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_1191 0c51c5afb55cddd7db565a991b35214a 281 SUPERFAMILY SSF53383 28 104 4.16E-8 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_1191 0c51c5afb55cddd7db565a991b35214a 281 Gene3D G3DSA:3.40.640.10 63 111 2.0E-8 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_1495 94f1ac1a3b9e9e01b986c187fdb2c4aa 61 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 2.4E-17 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain TREPR_1495 94f1ac1a3b9e9e01b986c187fdb2c4aa 61 Gene3D G3DSA:3.30.1390.20 1 59 3.5E-23 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TREPR_1495 94f1ac1a3b9e9e01b986c187fdb2c4aa 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 3.2E-24 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1495 94f1ac1a3b9e9e01b986c187fdb2c4aa 61 PIRSF PIRSF002211 1 61 2.6E-26 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1495 94f1ac1a3b9e9e01b986c187fdb2c4aa 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 18.419 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1495 94f1ac1a3b9e9e01b986c187fdb2c4aa 61 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 13-10-2018 IPR018038 Ribosomal protein L30, conserved site TREPR_1495 94f1ac1a3b9e9e01b986c187fdb2c4aa 61 SUPERFAMILY SSF55129 3 60 3.53E-18 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TREPR_0926 b123a0512781dc7203f92e71994e4497 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 142 8.7E-61 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0926 b123a0512781dc7203f92e71994e4497 143 SUPERFAMILY SSF46906 69 142 4.06E-25 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TREPR_0926 b123a0512781dc7203f92e71994e4497 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 142 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_0926 b123a0512781dc7203f92e71994e4497 143 SMART SM00649 10 142 2.2E-78 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TREPR_0926 b123a0512781dc7203f92e71994e4497 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 39 75 3.0E-14 T 13-10-2018 TREPR_0926 b123a0512781dc7203f92e71994e4497 143 SUPERFAMILY SSF54747 4 74 1.44E-27 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TREPR_0926 b123a0512781dc7203f92e71994e4497 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 143 29.919 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TREPR_0926 b123a0512781dc7203f92e71994e4497 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 68 3.4E-28 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal TREPR_0926 b123a0512781dc7203f92e71994e4497 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 7.5E-23 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 TREPR_0926 b123a0512781dc7203f92e71994e4497 143 Gene3D G3DSA:3.30.1550.10 3 73 1.8E-30 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TREPR_0926 b123a0512781dc7203f92e71994e4497 143 Gene3D G3DSA:1.10.10.250 74 142 1.9E-27 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TREPR_2773 f60ff505a99d0446c92d90f4beaa04d9 247 SUPERFAMILY SSF52218 34 170 3.09E-21 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_2773 f60ff505a99d0446c92d90f4beaa04d9 247 Pfam PF03358 NADPH-dependent FMN reductase 35 175 2.2E-14 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TREPR_2773 f60ff505a99d0446c92d90f4beaa04d9 247 Gene3D G3DSA:3.40.50.360 35 201 1.7E-25 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_0673 54d35e98ae52a87cd6b854ef5ae5c264 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 37 77 3.1E-8 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_0673 54d35e98ae52a87cd6b854ef5ae5c264 310 Gene3D G3DSA:1.10.3720.10 98 309 7.2E-22 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0673 54d35e98ae52a87cd6b854ef5ae5c264 310 SUPERFAMILY SSF161098 104 290 8.11E-26 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0673 54d35e98ae52a87cd6b854ef5ae5c264 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 310 6.2E-28 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 SMART SM00486 160 616 1.7E-50 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 SUPERFAMILY SSF56672 441 838 8.9E-79 T 13-10-2018 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 Pfam PF00136 DNA polymerase family B 436 782 2.5E-33 T 13-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 ProSitePatterns PS00116 DNA polymerase family B signature. 604 612 - T 13-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 Gene3D G3DSA:3.90.1600.10 401 496 8.7E-20 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 Gene3D G3DSA:3.90.1600.10 522 697 1.0E-32 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 Gene3D G3DSA:1.10.132.60 709 842 1.1E-34 T 13-10-2018 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 Pfam PF03104 DNA polymerase family B, exonuclease domain 232 348 5.5E-10 T 13-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 470 483 5.5E-9 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 550 562 5.5E-9 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 602 610 5.5E-9 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 SUPERFAMILY SSF53098 26 437 1.37E-44 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_3877 cbfd5b64a91a38854b778b45f6a3974d 860 Gene3D G3DSA:3.30.420.10 163 400 3.0E-47 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 529 9.6E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 560 9.6E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 579 608 9.6E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 9.6E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 SUPERFAMILY SSF103190 114 196 3.37E-10 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 Gene3D G3DSA:3.30.450.20 55 270 1.1E-35 T 13-10-2018 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 Gene3D G3DSA:1.20.1480.50 276 367 3.2E-8 T 13-10-2018 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 SUPERFAMILY SSF58104 401 646 4.45E-40 T 13-10-2018 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 Gene3D G3DSA:3.30.450.20 67 186 1.1E-35 T 13-10-2018 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 SMART SM00283 404 658 2.3E-22 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 Pfam PF02743 Cache domain 40 271 1.8E-29 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 Gene3D G3DSA:1.10.287.950 383 648 2.8E-41 T 13-10-2018 TREPR_2733 39b76cd92a75d4da2c2610c73f012e56 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 598 2.4E-26 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 342 353 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 SUPERFAMILY SSF51430 1 316 3.14E-59 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.4E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 PRINTS PR00069 Aldo-keto reductase signature 94 112 1.4E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 PRINTS PR00069 Aldo-keto reductase signature 130 147 1.4E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 Pfam PF00248 Aldo/keto reductase family 16 272 5.6E-36 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 Pfam PF13534 4Fe-4S dicluster domain 288 357 1.8E-10 T 13-10-2018 TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 Gene3D G3DSA:3.20.20.100 1 277 2.4E-53 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 SUPERFAMILY SSF46548 282 363 2.88E-10 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_3460 b10db30fac62a56a157fb82b68e53491 386 Gene3D G3DSA:1.10.1060.10 280 370 2.8E-10 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_0502 f6bfa17cbaf02f8807c57b805da8386e 246 Gene3D G3DSA:3.30.30.80 2 52 2.2E-6 T 13-10-2018 IPR038247 Jag, N-terminal domain superfamily TREPR_0502 f6bfa17cbaf02f8807c57b805da8386e 246 Pfam PF14804 Jag N-terminus 5 50 1.5E-10 T 13-10-2018 IPR032782 Jag, N-terminal TREPR_0502 f6bfa17cbaf02f8807c57b805da8386e 246 SMART SM01245 4 53 2.0E-7 T 13-10-2018 IPR032782 Jag, N-terminal TREPR_0502 f6bfa17cbaf02f8807c57b805da8386e 246 SUPERFAMILY SSF82708 190 241 4.71E-7 T 13-10-2018 IPR036867 R3H domain superfamily GO:0003676 TREPR_0502 f6bfa17cbaf02f8807c57b805da8386e 246 Pfam PF13083 KH domain 103 169 2.0E-10 T 13-10-2018 TREPR_0502 f6bfa17cbaf02f8807c57b805da8386e 246 Gene3D G3DSA:3.30.300.20 94 177 3.5E-21 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta TREPR_0502 f6bfa17cbaf02f8807c57b805da8386e 246 SMART SM00393 163 242 1.7E-21 T 13-10-2018 IPR001374 R3H domain GO:0003676 TREPR_0502 f6bfa17cbaf02f8807c57b805da8386e 246 Gene3D G3DSA:3.30.1370.50 178 246 7.7E-22 T 13-10-2018 IPR036867 R3H domain superfamily GO:0003676 TREPR_0502 f6bfa17cbaf02f8807c57b805da8386e 246 Pfam PF01424 R3H domain 183 240 6.8E-11 T 13-10-2018 IPR001374 R3H domain GO:0003676 TREPR_2224 c9d17f7efa4d914e010f4115dfa5af94 522 Gene3D G3DSA:1.20.1480.50 179 269 1.6E-13 T 13-10-2018 TREPR_2224 c9d17f7efa4d914e010f4115dfa5af94 522 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 331 520 1.8E-45 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_2224 c9d17f7efa4d914e010f4115dfa5af94 522 SMART SM00304 213 265 4.1E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_2224 c9d17f7efa4d914e010f4115dfa5af94 522 Gene3D G3DSA:3.60.40.10 270 520 1.7E-66 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_2224 c9d17f7efa4d914e010f4115dfa5af94 522 SUPERFAMILY SSF158472 214 264 8.5E-10 T 13-10-2018 TREPR_2224 c9d17f7efa4d914e010f4115dfa5af94 522 SUPERFAMILY SSF81606 315 470 8.37E-8 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_2224 c9d17f7efa4d914e010f4115dfa5af94 522 Pfam PF00672 HAMP domain 214 258 6.0E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_2224 c9d17f7efa4d914e010f4115dfa5af94 522 SMART SM00331 302 521 4.4E-41 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_1111 59fb40709ac234878a96adfeda71f095 61 SUPERFAMILY SSF88723 4 59 3.24E-13 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_1111 59fb40709ac234878a96adfeda71f095 61 Gene3D G3DSA:3.40.50.1010 1 60 3.4E-14 T 13-10-2018 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 SUPERFAMILY SSF51011 681 830 8.99E-13 T 13-10-2018 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 Pfam PF07883 Cupin domain 19 82 7.5E-11 T 13-10-2018 IPR013096 Cupin 2, conserved barrel TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 Pfam PF12833 Helix-turn-helix domain 204 282 5.1E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 Gene3D G3DSA:2.60.120.10 3 87 2.9E-13 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 ProSitePatterns PS01027 Glycosyl hydrolases family 39 active site. 482 491 - T 13-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 Gene3D G3DSA:1.10.10.60 183 230 7.0E-16 T 13-10-2018 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 SUPERFAMILY SSF51215 22 162 2.62E-14 T 13-10-2018 IPR037923 Transcription regulator HTH-like TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 Gene3D G3DSA:2.60.40.1500 690 826 1.7E-127 T 13-10-2018 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 277 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 Gene3D G3DSA:1.10.10.60 231 285 3.7E-16 T 13-10-2018 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 SMART SM00342 198 281 1.5E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 Pfam PF01229 Glycosyl hydrolases family 39 340 822 4.7E-69 T 13-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 SUPERFAMILY SSF46689 182 232 3.54E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 PRINTS PR00745 Glycosyl hydrolase family 39 signature 415 431 6.8E-9 T 13-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 PRINTS PR00745 Glycosyl hydrolase family 39 signature 543 557 6.8E-9 T 13-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 PRINTS PR00745 Glycosyl hydrolase family 39 signature 479 495 6.8E-9 T 13-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 PRINTS PR00745 Glycosyl hydrolase family 39 signature 462 479 6.8E-9 T 13-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 Gene3D G3DSA:3.20.20.80 364 689 1.7E-127 T 13-10-2018 TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 SUPERFAMILY SSF51445 348 687 1.73E-68 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_1328 c7650f0b1db066d4d8b144c0c6cd94b1 833 SUPERFAMILY SSF46689 234 285 3.09E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_1422 c094df9b2401959c2d9b8f9ef23f1242 410 PRINTS PR00173 Glutamate-aspartate symporter signature 286 312 3.2E-6 T 13-10-2018 TREPR_1422 c094df9b2401959c2d9b8f9ef23f1242 410 PRINTS PR00173 Glutamate-aspartate symporter signature 42 62 3.2E-6 T 13-10-2018 TREPR_1422 c094df9b2401959c2d9b8f9ef23f1242 410 PRINTS PR00173 Glutamate-aspartate symporter signature 135 157 3.2E-6 T 13-10-2018 TREPR_1422 c094df9b2401959c2d9b8f9ef23f1242 410 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 3.2E-6 T 13-10-2018 TREPR_1422 c094df9b2401959c2d9b8f9ef23f1242 410 PRINTS PR00173 Glutamate-aspartate symporter signature 218 237 3.2E-6 T 13-10-2018 TREPR_1422 c094df9b2401959c2d9b8f9ef23f1242 410 SUPERFAMILY SSF118215 4 385 3.4E-33 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TREPR_1422 c094df9b2401959c2d9b8f9ef23f1242 410 Pfam PF00375 Sodium:dicarboxylate symporter family 4 368 7.1E-31 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 TREPR_1422 c094df9b2401959c2d9b8f9ef23f1242 410 Gene3D G3DSA:1.10.3860.10 1 407 7.6E-36 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 Gene3D G3DSA:3.90.190.20 364 522 1.0E-48 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 SUPERFAMILY SSF53244 360 520 2.22E-36 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 30 518 6.8E-152 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 Gene3D G3DSA:3.40.1390.10 13 106 1.4E-23 T 13-10-2018 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 Gene3D G3DSA:3.40.1190.10 107 363 2.5E-61 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 Pfam PF01225 Mur ligase family, catalytic domain 30 77 3.4E-12 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 Pfam PF02875 Mur ligase family, glutamate ligase domain 360 445 6.1E-15 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 Pfam PF08245 Mur ligase middle domain 116 338 4.5E-37 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 SUPERFAMILY SSF53623 107 340 5.36E-50 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 14 518 29.961 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TREPR_1063 5fdb35f63995690937b9a6c2ff0153e7 527 SUPERFAMILY SSF63418 23 105 1.83E-23 T 13-10-2018 IPR035911 MurE/MurF, N-terminal TREPR_3564 7b4eef6658029d88eea071919d3f0858 469 PRINTS PR00175 Sodium/alanine symporter signature 413 433 4.6E-46 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TREPR_3564 7b4eef6658029d88eea071919d3f0858 469 PRINTS PR00175 Sodium/alanine symporter signature 354 376 4.6E-46 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TREPR_3564 7b4eef6658029d88eea071919d3f0858 469 PRINTS PR00175 Sodium/alanine symporter signature 307 325 4.6E-46 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TREPR_3564 7b4eef6658029d88eea071919d3f0858 469 PRINTS PR00175 Sodium/alanine symporter signature 89 111 4.6E-46 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TREPR_3564 7b4eef6658029d88eea071919d3f0858 469 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.6E-46 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TREPR_3564 7b4eef6658029d88eea071919d3f0858 469 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.6E-46 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TREPR_3564 7b4eef6658029d88eea071919d3f0858 469 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 444 9.1E-133 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TREPR_3564 7b4eef6658029d88eea071919d3f0858 469 Pfam PF01235 Sodium:alanine symporter family 51 445 4.4E-134 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TREPR_2761 49bf095b8e0cff96bff17ec33777088e 635 SUPERFAMILY SSF109604 424 607 2.36E-8 T 13-10-2018 TREPR_2761 49bf095b8e0cff96bff17ec33777088e 635 Gene3D G3DSA:1.10.3210.10 407 619 4.3E-25 T 13-10-2018 TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 246 268 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 PIRSF PIRSF000193 121 291 4.6E-52 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 PIRSF PIRSF000193 2 131 1.9E-21 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 290 1.0E-85 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 103 3.7E-18 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 186 290 1.6E-43 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 SUPERFAMILY SSF48179 185 291 5.1E-39 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 Gene3D G3DSA:3.40.50.720 1 188 1.6E-43 T 13-10-2018 TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 SUPERFAMILY SSF51735 4 182 4.12E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 290 27.858 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TREPR_0155 c5017e2e5eddcc044e5fdeaa20501c4d 291 Gene3D G3DSA:1.10.3730.10 189 291 3.9E-44 T 13-10-2018 TREPR_0079 be142e77417b07a7bb8355ead31e7ccc 387 Pfam PF04015 Domain of unknown function (DUF362) 39 238 8.8E-50 T 13-10-2018 IPR007160 Domain of unknown function DUF362 TREPR_0079 be142e77417b07a7bb8355ead31e7ccc 387 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 358 369 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_0079 be142e77417b07a7bb8355ead31e7ccc 387 SUPERFAMILY SSF54862 307 379 1.93E-15 T 13-10-2018 TREPR_0079 be142e77417b07a7bb8355ead31e7ccc 387 Gene3D G3DSA:3.30.70.20 314 378 2.4E-10 T 13-10-2018 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 SUPERFAMILY SSF52172 427 550 2.85E-31 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 SMART SM00448 430 548 1.4E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 Pfam PF00072 Response regulator receiver domain 432 547 3.0E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 4.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 405 4.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 361 4.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 386 4.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 SMART SM00388 178 244 4.5E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 54 169 2.1E-8 T 13-10-2018 IPR000014 PAS domain TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 Pfam PF08448 PAS fold 56 167 2.0E-10 T 13-10-2018 IPR013656 PAS fold-4 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 SUPERFAMILY SSF55874 233 406 3.67E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 244 2.4E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 Gene3D G3DSA:1.10.287.130 162 245 4.3E-23 T 13-10-2018 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 Gene3D G3DSA:3.40.50.2300 412 550 3.1E-37 T 13-10-2018 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 SUPERFAMILY SSF55785 42 163 1.15E-11 T 13-10-2018 IPR035965 PAS domain superfamily TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 Gene3D G3DSA:3.30.565.10 246 411 1.1E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 291 407 2.1E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 SMART SM00387 291 408 1.9E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 Gene3D G3DSA:3.30.450.20 58 161 6.4E-13 T 13-10-2018 TREPR_0280 49c51d8726494125a0ad002ac2b24b75 556 SUPERFAMILY SSF47384 170 245 1.71E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 SUPERFAMILY SSF63411 775 956 7.68E-20 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 Gene3D G3DSA:3.30.830.10 765 957 5.5E-24 T 13-10-2018 TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 Pfam PF05193 Peptidase M16 inactive domain 710 888 1.4E-16 T 13-10-2018 IPR007863 Peptidase M16, C-terminal TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 Pfam PF05193 Peptidase M16 inactive domain 231 414 2.9E-11 T 13-10-2018 IPR007863 Peptidase M16, C-terminal TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 SUPERFAMILY SSF63411 531 757 5.94E-29 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 SUPERFAMILY SSF63411 299 488 5.82E-7 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 Pfam PF00675 Insulinase (Peptidase family M16) 65 192 9.2E-30 T 13-10-2018 IPR011765 Peptidase M16, N-terminal TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 Gene3D G3DSA:3.30.830.10 548 758 3.0E-25 T 13-10-2018 TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 SUPERFAMILY SSF63411 50 276 9.53E-46 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 Gene3D G3DSA:3.30.830.10 47 278 5.7E-63 T 13-10-2018 TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 84 107 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 TREPR_0371 35e19c2331ac9d8d4734c16662066ae1 958 Gene3D G3DSA:3.30.830.10 288 490 3.1E-13 T 13-10-2018 TREPR_2565 c1dfe4d74647243674f1407630096244 722 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 30 635 5.7E-238 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 189 207 1.1E-34 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 1.1E-34 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 102 115 1.1E-34 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 1.1E-34 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 319 328 1.1E-34 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 SMART SM00493 28 128 5.9E-26 T 13-10-2018 IPR006171 TOPRIM domain TREPR_2565 c1dfe4d74647243674f1407630096244 722 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 639 675 3.1E-13 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 636 3.3E-13 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 679 714 1.6E-6 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TREPR_2565 c1dfe4d74647243674f1407630096244 722 SUPERFAMILY SSF57783 597 636 4.76E-13 T 13-10-2018 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Pfam PF01131 DNA topoisomerase 155 569 4.5E-122 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 SMART SM00436 131 219 5.4E-50 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Gene3D G3DSA:1.10.290.10 277 410 5.2E-148 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Hamap MF_00952 DNA topoisomerase 1 [topA]. 28 663 50.957 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 SUPERFAMILY SSF56712 28 612 4.84E-181 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain TREPR_2565 c1dfe4d74647243674f1407630096244 722 SMART SM00437 269 533 2.3E-101 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Gene3D G3DSA:2.70.20.10 211 480 5.2E-148 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Gene3D G3DSA:3.30.65.10 594 639 3.5E-14 T 13-10-2018 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Gene3D G3DSA:1.10.460.10 162 573 5.2E-148 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TREPR_2565 c1dfe4d74647243674f1407630096244 722 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 306 328 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Gene3D G3DSA:3.40.50.140 27 161 5.7E-48 T 13-10-2018 TREPR_2565 c1dfe4d74647243674f1407630096244 722 Pfam PF01751 Toprim domain 30 140 1.2E-26 T 13-10-2018 IPR006171 TOPRIM domain TREPR_1026 89fc0e892fa7f2302b3498c5073f67b4 263 Gene3D G3DSA:1.10.1670.10 184 254 7.0E-61 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TREPR_1026 89fc0e892fa7f2302b3498c5073f67b4 263 ProSitePatterns PS01155 Endonuclease III family signature. 153 182 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 TREPR_1026 89fc0e892fa7f2302b3498c5073f67b4 263 Pfam PF00633 Helix-hairpin-helix motif 150 177 6.1E-9 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TREPR_1026 89fc0e892fa7f2302b3498c5073f67b4 263 PIRSF PIRSF001435 67 262 7.3E-42 T 13-10-2018 TREPR_1026 89fc0e892fa7f2302b3498c5073f67b4 263 Gene3D G3DSA:1.10.340.30 75 183 7.0E-61 T 13-10-2018 TREPR_1026 89fc0e892fa7f2302b3498c5073f67b4 263 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 86 219 1.7E-20 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TREPR_1026 89fc0e892fa7f2302b3498c5073f67b4 263 SUPERFAMILY SSF48150 73 255 7.07E-61 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TREPR_1026 89fc0e892fa7f2302b3498c5073f67b4 263 SMART SM00478 89 236 2.3E-54 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TREPR_2067 385a77c646f840b3521c9df68c2dac4a 429 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 168 344 3.2E-29 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_2067 385a77c646f840b3521c9df68c2dac4a 429 SUPERFAMILY SSF55073 163 352 3.14E-52 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_2067 385a77c646f840b3521c9df68c2dac4a 429 SMART SM00448 6 118 2.4E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2067 385a77c646f840b3521c9df68c2dac4a 429 SMART SM00044 114 341 3.3E-12 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_2067 385a77c646f840b3521c9df68c2dac4a 429 Gene3D G3DSA:3.40.50.2300 1 138 9.2E-37 T 13-10-2018 TREPR_2067 385a77c646f840b3521c9df68c2dac4a 429 Gene3D G3DSA:3.30.70.1230 157 363 3.0E-63 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_2067 385a77c646f840b3521c9df68c2dac4a 429 Pfam PF00072 Response regulator receiver domain 8 119 5.9E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2067 385a77c646f840b3521c9df68c2dac4a 429 SUPERFAMILY SSF52172 8 142 2.99E-36 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1863 8493dfe5b8dd67e41b7ac9ce95dcbc02 113 Gene3D G3DSA:2.30.30.110 1 106 1.7E-23 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TREPR_1863 8493dfe5b8dd67e41b7ac9ce95dcbc02 113 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 104 2.6E-18 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TREPR_1863 8493dfe5b8dd67e41b7ac9ce95dcbc02 113 SUPERFAMILY SSF50118 1 106 5.07E-22 T 13-10-2018 TREPR_0724 eca6f311c6f5291f16887179f6c70a4d 251 Pfam PF00005 ABC transporter 26 175 2.8E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0724 eca6f311c6f5291f16887179f6c70a4d 251 SUPERFAMILY SSF52540 10 244 1.77E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0724 eca6f311c6f5291f16887179f6c70a4d 251 Gene3D G3DSA:3.40.50.300 8 251 7.2E-78 T 13-10-2018 TREPR_0724 eca6f311c6f5291f16887179f6c70a4d 251 SMART SM00382 35 223 5.9E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0724 eca6f311c6f5291f16887179f6c70a4d 251 PIRSF PIRSF039085 7 251 8.6E-108 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TREPR_0724 eca6f311c6f5291f16887179f6c70a4d 251 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3596 2b81e6591e3a2b31e2912204aa0b9d17 167 Gene3D G3DSA:3.40.30.10 82 167 3.1E-27 T 13-10-2018 TREPR_3596 2b81e6591e3a2b31e2912204aa0b9d17 167 PIRSF PIRSF000216 10 167 4.6E-49 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3596 2b81e6591e3a2b31e2912204aa0b9d17 167 SUPERFAMILY SSF52833 19 165 1.9E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_3596 2b81e6591e3a2b31e2912204aa0b9d17 167 Gene3D G3DSA:1.10.10.1590 13 81 1.4E-12 T 13-10-2018 TREPR_3596 2b81e6591e3a2b31e2912204aa0b9d17 167 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 164 4.2E-46 T 13-10-2018 TREPR_3638 3b9deec7a0b5c791b644a54a50d850e4 503 Pfam PF02637 GatB domain 351 500 6.5E-24 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TREPR_3638 3b9deec7a0b5c791b644a54a50d850e4 503 Gene3D G3DSA:1.10.10.410 432 503 1.7E-7 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal TREPR_3638 3b9deec7a0b5c791b644a54a50d850e4 503 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 12 501 32.651 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TREPR_3638 3b9deec7a0b5c791b644a54a50d850e4 503 SUPERFAMILY SSF55931 16 300 5.76E-107 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TREPR_3638 3b9deec7a0b5c791b644a54a50d850e4 503 SMART SM00845 334 500 1.2E-29 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TREPR_3638 3b9deec7a0b5c791b644a54a50d850e4 503 Pfam PF02934 GatB/GatE catalytic domain 16 293 3.6E-103 T 13-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 TREPR_3638 3b9deec7a0b5c791b644a54a50d850e4 503 Gene3D G3DSA:1.10.150.380 303 431 4.5E-24 T 13-10-2018 TREPR_3638 3b9deec7a0b5c791b644a54a50d850e4 503 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 12 500 3.9E-142 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TREPR_3638 3b9deec7a0b5c791b644a54a50d850e4 503 SUPERFAMILY SSF89095 303 420 5.31E-18 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 435 3.3E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 SUPERFAMILY SSF52172 580 717 1.01E-29 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 Gene3D G3DSA:3.40.50.2300 578 717 1.7E-37 T 13-10-2018 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 1.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 1.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 SMART SM00387 324 439 6.8E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 277 1.6E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 Gene3D G3DSA:1.20.120.160 745 851 2.6E-10 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 Gene3D G3DSA:1.10.287.130 178 275 3.8E-27 T 13-10-2018 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 Pfam PF00072 Response regulator receiver domain 585 653 5.1E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 SUPERFAMILY SSF47384 197 278 7.46E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 Gene3D G3DSA:3.30.565.10 276 442 3.4E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 SUPERFAMILY SSF55874 266 435 1.83E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 SMART SM00448 582 713 1.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 SMART SM00388 212 277 1.2E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1255 c8efd3ebb6544c2332dd85e778758460 934 SUPERFAMILY SSF47226 696 834 8.37E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_0317 96cc8f8bf8acb45985b3badf024ba520 150 SUPERFAMILY SSF81593 8 139 6.28E-16 T 13-10-2018 TREPR_2515 9b081bad15d24a2a55246918456ea3fb 323 SUPERFAMILY SSF117892 103 216 2.35E-16 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily TREPR_2515 9b081bad15d24a2a55246918456ea3fb 323 Pfam PF01145 SPFH domain / Band 7 family 36 238 4.5E-27 T 13-10-2018 IPR001107 Band 7 domain TREPR_2515 9b081bad15d24a2a55246918456ea3fb 323 TIGRFAM TIGR01933 hflK: HflK protein 34 313 2.6E-96 T 13-10-2018 IPR010201 HflK GO:0016021 TREPR_2515 9b081bad15d24a2a55246918456ea3fb 323 Gene3D G3DSA:3.30.479.30 96 213 9.3E-15 T 13-10-2018 TREPR_2515 9b081bad15d24a2a55246918456ea3fb 323 SMART SM00244 32 211 4.1E-23 T 13-10-2018 IPR001107 Band 7 domain TREPR_3315 dbdb4dd5f61c19a2c9689c718035cade 302 SUPERFAMILY SSF51621 7 241 3.84E-65 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_3315 dbdb4dd5f61c19a2c9689c718035cade 302 PIRSF PIRSF015582 1 301 1.6E-80 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like TREPR_3315 dbdb4dd5f61c19a2c9689c718035cade 302 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 8 295 1.6E-135 T 13-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 TREPR_3315 dbdb4dd5f61c19a2c9689c718035cade 302 Gene3D G3DSA:3.20.20.60 3 295 2.2E-94 T 13-10-2018 TREPR_3315 dbdb4dd5f61c19a2c9689c718035cade 302 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 230 7.4E-75 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TREPR_2769 974c641e979fee481877ac590dc74f13 236 SUPERFAMILY SSF54534 40 233 4.26E-52 T 13-10-2018 TREPR_2769 974c641e979fee481877ac590dc74f13 236 Gene3D G3DSA:1.10.287.460 36 97 3.9E-9 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 TREPR_2769 974c641e979fee481877ac590dc74f13 236 Gene3D G3DSA:3.10.50.40 98 236 1.9E-49 T 13-10-2018 TREPR_2769 974c641e979fee481877ac590dc74f13 236 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 143 231 5.0E-23 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TREPR_2769 974c641e979fee481877ac590dc74f13 236 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 28 136 6.9E-18 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 TREPR_1205 941809e30f780522bdcfb65efee63087 419 Gene3D G3DSA:1.20.1250.20 4 406 6.8E-34 T 13-10-2018 TREPR_1205 941809e30f780522bdcfb65efee63087 419 SUPERFAMILY SSF103473 8 410 1.44E-34 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_1205 941809e30f780522bdcfb65efee63087 419 Pfam PF07690 Major Facilitator Superfamily 14 360 1.5E-23 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TREPR_0432 d4f9ffbf75b475a9eab18165f8d656e5 399 Gene3D G3DSA:3.40.50.2300 40 371 4.4E-86 T 13-10-2018 TREPR_0432 d4f9ffbf75b475a9eab18165f8d656e5 399 SUPERFAMILY SSF53822 38 394 2.73E-75 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0432 d4f9ffbf75b475a9eab18165f8d656e5 399 Gene3D G3DSA:3.40.50.2300 161 292 4.4E-86 T 13-10-2018 TREPR_0432 d4f9ffbf75b475a9eab18165f8d656e5 399 Pfam PF13458 Periplasmic binding protein 38 386 4.4E-52 T 13-10-2018 IPR028081 Leucine-binding protein domain TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 19 341 7.0E-166 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 SUPERFAMILY SSF54752 288 343 3.01E-19 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 SUPERFAMILY SSF52540 18 285 2.53E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 Hamap MF_00268 Protein RecA [recA]. 20 347 51.559 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 Gene3D G3DSA:3.30.250.10 288 345 5.3E-23 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 SMART SM00382 73 244 3.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 ProSitePatterns PS00321 recA signature. 229 237 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 Gene3D G3DSA:3.40.50.300 42 285 1.0E-79 T 13-10-2018 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 PRINTS PR00142 RecA protein signature 109 138 4.4E-82 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 PRINTS PR00142 RecA protein signature 226 254 4.4E-82 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 PRINTS PR00142 RecA protein signature 181 210 4.4E-82 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 PRINTS PR00142 RecA protein signature 261 290 4.4E-82 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 PRINTS PR00142 RecA protein signature 315 332 4.4E-82 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 PRINTS PR00142 RecA protein signature 143 172 4.4E-82 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TREPR_2344 df90020040197689ca888d3dcfe4fdb9 466 Pfam PF00154 recA bacterial DNA recombination protein 22 286 4.9E-139 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TREPR_1228 e65354073ef411d737ef7d97cd04eeb6 402 PIRSF PIRSF001434 1 400 2.7E-118 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_1228 e65354073ef411d737ef7d97cd04eeb6 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 209 223 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_1228 e65354073ef411d737ef7d97cd04eeb6 402 Gene3D G3DSA:3.40.640.10 2 267 1.0E-79 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_1228 e65354073ef411d737ef7d97cd04eeb6 402 SUPERFAMILY SSF53383 50 398 2.15E-95 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_1228 e65354073ef411d737ef7d97cd04eeb6 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 396 3.7E-109 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_1228 e65354073ef411d737ef7d97cd04eeb6 402 Gene3D G3DSA:3.90.1150.10 268 400 9.1E-37 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_1972 638c27cb6e435b30358b51eed3a3eac3 354 SMART SM00354 6 76 1.3E-21 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_1972 638c27cb6e435b30358b51eed3a3eac3 354 Pfam PF13377 Periplasmic binding protein-like domain 173 334 1.5E-36 T 13-10-2018 TREPR_1972 638c27cb6e435b30358b51eed3a3eac3 354 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.2E-12 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_1972 638c27cb6e435b30358b51eed3a3eac3 354 SUPERFAMILY SSF53822 66 335 4.71E-73 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1972 638c27cb6e435b30358b51eed3a3eac3 354 Gene3D G3DSA:3.40.50.2300 165 294 1.0E-76 T 13-10-2018 TREPR_1972 638c27cb6e435b30358b51eed3a3eac3 354 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 13-10-2018 TREPR_1972 638c27cb6e435b30358b51eed3a3eac3 354 Gene3D G3DSA:1.10.260.40 2 63 5.0E-18 T 13-10-2018 TREPR_1972 638c27cb6e435b30358b51eed3a3eac3 354 SUPERFAMILY SSF47413 5 64 3.41E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1972 638c27cb6e435b30358b51eed3a3eac3 354 Gene3D G3DSA:3.40.50.2300 70 313 1.0E-76 T 13-10-2018 TREPR_0505 83c248435312a3d49b491d4c4883e7ed 134 Pfam PF00825 Ribonuclease P 23 126 3.1E-17 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TREPR_0505 83c248435312a3d49b491d4c4883e7ed 134 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 23 130 13.612 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TREPR_0505 83c248435312a3d49b491d4c4883e7ed 134 Gene3D G3DSA:3.30.230.10 19 128 1.2E-20 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_0505 83c248435312a3d49b491d4c4883e7ed 134 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 27 126 1.5E-13 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TREPR_0505 83c248435312a3d49b491d4c4883e7ed 134 SUPERFAMILY SSF54211 22 112 7.33E-19 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2128 4a4cfeaf58e4ce3584b3a33dea92f854 326 Pfam PF00005 ABC transporter 24 181 3.3E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2128 4a4cfeaf58e4ce3584b3a33dea92f854 326 SUPERFAMILY SSF52540 3 253 4.86E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2128 4a4cfeaf58e4ce3584b3a33dea92f854 326 SMART SM00382 32 246 3.0E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2128 4a4cfeaf58e4ce3584b3a33dea92f854 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2128 4a4cfeaf58e4ce3584b3a33dea92f854 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 9.0E-26 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_2128 4a4cfeaf58e4ce3584b3a33dea92f854 326 Gene3D G3DSA:3.40.50.300 1 323 8.8E-93 T 13-10-2018 TREPR_2128 4a4cfeaf58e4ce3584b3a33dea92f854 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 300 3.9E-21 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 3.3E-15 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 3.3E-15 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 3.3E-15 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 Pfam PF00117 Glutamine amidotransferase class-I 3 186 3.8E-46 T 13-10-2018 IPR017926 Glutamine amidotransferase TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 SUPERFAMILY SSF52317 1 186 4.23E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.9E-6 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.9E-6 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 Gene3D G3DSA:3.40.50.880 1 189 2.8E-59 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 1.6E-61 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00097 Anthranilate synthase component II signature 120 132 1.2E-33 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.2E-33 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.2E-33 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.2E-33 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.2E-33 T 13-10-2018 TREPR_0383 bafc6a6f372243f808eaa6cffc1879b2 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.2E-33 T 13-10-2018 TREPR_3700 8ac18c962cd119c8b0a62ff08b5252cc 271 Gene3D G3DSA:3.20.20.140 1 271 8.1E-82 T 13-10-2018 TREPR_3700 8ac18c962cd119c8b0a62ff08b5252cc 271 SUPERFAMILY SSF51556 3 271 2.88E-69 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_3700 8ac18c962cd119c8b0a62ff08b5252cc 271 Pfam PF01026 TatD related DNase 4 269 9.4E-58 T 13-10-2018 IPR001130 TatD family GO:0016788 TREPR_3700 8ac18c962cd119c8b0a62ff08b5252cc 271 PIRSF PIRSF005902 1 271 5.0E-63 T 13-10-2018 IPR001130 TatD family GO:0016788 TREPR_3700 8ac18c962cd119c8b0a62ff08b5252cc 271 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 130 140 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TREPR_2668 86c868641c3253b2a0c1dfe20ac0a26e 158 SUPERFAMILY SSF54637 30 154 3.07E-43 T 13-10-2018 IPR029069 HotDog domain superfamily TREPR_2668 86c868641c3253b2a0c1dfe20ac0a26e 158 PIRSF PIRSF014972 29 158 5.6E-45 T 13-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase TREPR_2668 86c868641c3253b2a0c1dfe20ac0a26e 158 Pfam PF03061 Thioesterase superfamily 65 131 6.9E-5 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TREPR_2668 86c868641c3253b2a0c1dfe20ac0a26e 158 Gene3D G3DSA:3.10.129.10 31 158 4.5E-46 T 13-10-2018 TREPR_2414 182870b2832d918efdae2846aed70510 484 SUPERFAMILY SSF53623 107 303 7.59E-38 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_2414 182870b2832d918efdae2846aed70510 484 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 414 1.5E-19 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TREPR_2414 182870b2832d918efdae2846aed70510 484 SUPERFAMILY SSF53244 331 476 1.57E-36 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_2414 182870b2832d918efdae2846aed70510 484 Gene3D G3DSA:3.90.190.20 329 482 1.3E-49 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_2414 182870b2832d918efdae2846aed70510 484 Gene3D G3DSA:3.40.50.720 13 106 3.0E-22 T 13-10-2018 TREPR_2414 182870b2832d918efdae2846aed70510 484 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 474 4.7E-129 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_2414 182870b2832d918efdae2846aed70510 484 Pfam PF01225 Mur ligase family, catalytic domain 18 117 1.4E-17 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TREPR_2414 182870b2832d918efdae2846aed70510 484 Gene3D G3DSA:3.40.1190.10 108 328 6.2E-46 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_2414 182870b2832d918efdae2846aed70510 484 SUPERFAMILY SSF51984 18 105 7.85E-17 T 13-10-2018 TREPR_2414 182870b2832d918efdae2846aed70510 484 Pfam PF08245 Mur ligase middle domain 123 302 7.8E-15 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TREPR_2414 182870b2832d918efdae2846aed70510 484 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 480 32.583 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 SUPERFAMILY SSF50156 287 396 1.14E-18 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 PRINTS PR00834 HtrA/DegQ protease family signature 140 152 2.0E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 PRINTS PR00834 HtrA/DegQ protease family signature 237 254 2.0E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 PRINTS PR00834 HtrA/DegQ protease family signature 346 358 2.0E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 PRINTS PR00834 HtrA/DegQ protease family signature 161 181 2.0E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 PRINTS PR00834 HtrA/DegQ protease family signature 259 276 2.0E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 PRINTS PR00834 HtrA/DegQ protease family signature 202 226 2.0E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 71 496 4.8E-140 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 SUPERFAMILY SSF50156 412 496 6.84E-16 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 Gene3D G3DSA:2.30.42.10 410 502 2.4E-16 T 13-10-2018 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 Gene3D G3DSA:2.40.10.120 70 299 8.3E-71 T 13-10-2018 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 SMART SM00228 413 493 1.8E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 SMART SM00228 306 388 3.6E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 Pfam PF13365 Trypsin-like peptidase domain 128 266 3.2E-30 T 13-10-2018 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 Pfam PF13180 PDZ domain 432 497 9.0E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 Pfam PF13180 PDZ domain 306 396 5.7E-12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 Gene3D G3DSA:2.30.42.10 305 409 4.0E-22 T 13-10-2018 TREPR_1220 0f4ef56a8e38b3d9fc343d9e4bd429ff 503 SUPERFAMILY SSF50494 71 298 6.45E-56 T 13-10-2018 IPR009003 Peptidase S1, PA clan TREPR_3039 134e040f6f813ef05a7df10052a3cdd1 288 Pfam PF13277 YmdB-like protein 167 284 4.0E-40 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TREPR_3039 134e040f6f813ef05a7df10052a3cdd1 288 Pfam PF13277 YmdB-like protein 8 141 4.1E-48 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TREPR_3039 134e040f6f813ef05a7df10052a3cdd1 288 SUPERFAMILY SSF56300 4 274 1.84E-48 T 13-10-2018 TREPR_3039 134e040f6f813ef05a7df10052a3cdd1 288 Gene3D G3DSA:3.60.21.10 1 288 9.0E-104 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_3039 134e040f6f813ef05a7df10052a3cdd1 288 PIRSF PIRSF004789 3 287 2.2E-82 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 Gene3D G3DSA:3.40.50.300 379 456 5.1E-27 T 13-10-2018 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 Gene3D G3DSA:3.40.50.300 532 745 8.0E-77 T 13-10-2018 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 Gene3D G3DSA:1.10.1780.10 2 140 1.9E-32 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 746 823 2.9E-17 T 13-10-2018 IPR019489 Clp ATPase, C-terminal TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 Gene3D G3DSA:3.40.50.300 182 377 2.6E-62 T 13-10-2018 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 654 672 5.1E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 625 643 5.1E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 701 5.1E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 583 601 5.1E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 14 57 1.1E-7 T 13-10-2018 IPR004176 Clp, N-terminal TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 4 825 0.0 T 13-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 SUPERFAMILY SSF52540 195 443 4.14E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 SUPERFAMILY SSF81923 3 138 1.7E-35 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 Gene3D G3DSA:1.10.8.60 746 846 2.5E-20 T 13-10-2018 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 SMART SM01086 746 835 1.6E-21 T 13-10-2018 IPR019489 Clp ATPase, C-terminal TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 610 628 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 SUPERFAMILY SSF52540 530 814 1.91E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 329 341 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 Pfam PF07724 AAA domain (Cdc48 subfamily) 578 739 1.7E-48 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 SMART SM00382 234 377 2.9E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 SMART SM00382 579 721 1.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2813 4142c16b64ffb90af56945b16de8d948 848 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 239 354 6.2E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 Pfam PF02355 Protein export membrane protein 214 387 1.5E-59 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 Gene3D G3DSA:1.20.1640.10 200 405 6.3E-11 T 13-10-2018 TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 198 377 5.8E-51 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 SUPERFAMILY SSF82866 212 387 1.96E-35 T 13-10-2018 TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 154 380 2.8E-69 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 PRINTS PR01755 Bacterial translocase SecF protein signature 296 314 2.5E-26 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 PRINTS PR01755 Bacterial translocase SecF protein signature 248 262 2.5E-26 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 PRINTS PR01755 Bacterial translocase SecF protein signature 31 46 2.5E-26 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 PRINTS PR01755 Bacterial translocase SecF protein signature 328 343 2.5E-26 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TREPR_1547 6a099170377ac38699b0de5d038cea7e 406 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 4 391 27.013 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TREPR_1785 84be5304e0ddf4944d214706218888c5 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 315 4.3E-39 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1785 84be5304e0ddf4944d214706218888c5 318 Gene3D G3DSA:1.10.3720.10 86 311 2.0E-23 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1785 84be5304e0ddf4944d214706218888c5 318 SUPERFAMILY SSF161098 90 304 4.32E-18 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3513 cb2319ad950742f92b4dbe8f8f841586 113 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 TREPR_3513 cb2319ad950742f92b4dbe8f8f841586 113 SMART SM00938 4 105 2.3E-48 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_3513 cb2319ad950742f92b4dbe8f8f841586 113 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-33 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_3513 cb2319ad950742f92b4dbe8f8f841586 113 SUPERFAMILY SSF54913 1 112 6.04E-39 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TREPR_3513 cb2319ad950742f92b4dbe8f8f841586 113 Gene3D G3DSA:3.30.70.120 1 112 1.7E-41 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TREPR_3513 cb2319ad950742f92b4dbe8f8f841586 113 PRINTS PR00340 P-II protein signature 83 103 2.4E-26 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_3513 cb2319ad950742f92b4dbe8f8f841586 113 PRINTS PR00340 P-II protein signature 52 75 2.4E-26 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_3513 cb2319ad950742f92b4dbe8f8f841586 113 PRINTS PR00340 P-II protein signature 23 41 2.4E-26 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_3513 cb2319ad950742f92b4dbe8f8f841586 113 PRINTS PR00340 P-II protein signature 2 17 2.4E-26 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_3176 5972ad0e6b7df2af1b79f302355ee709 158 Gene3D G3DSA:3.30.1360.80 1 158 2.2E-46 T 13-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TREPR_3176 5972ad0e6b7df2af1b79f302355ee709 158 SUPERFAMILY SSF63411 3 144 7.69E-43 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TREPR_3176 5972ad0e6b7df2af1b79f302355ee709 158 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 3 143 1.2E-52 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TREPR_3176 5972ad0e6b7df2af1b79f302355ee709 158 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 10 139 3.0E-42 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TREPR_3176 5972ad0e6b7df2af1b79f302355ee709 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 75 93 2.0E-14 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TREPR_3176 5972ad0e6b7df2af1b79f302355ee709 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 48 66 2.0E-14 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TREPR_3176 5972ad0e6b7df2af1b79f302355ee709 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.0E-14 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TREPR_3176 5972ad0e6b7df2af1b79f302355ee709 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 117 136 2.0E-14 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TREPR_3667 4eac306a09d61395a1908e2c02825ac6 550 Gene3D G3DSA:3.40.190.10 39 533 5.8E-160 T 13-10-2018 TREPR_3667 4eac306a09d61395a1908e2c02825ac6 550 SUPERFAMILY SSF53850 28 547 7.24E-124 T 13-10-2018 TREPR_3667 4eac306a09d61395a1908e2c02825ac6 550 Gene3D G3DSA:3.90.76.10 65 195 5.8E-160 T 13-10-2018 TREPR_3667 4eac306a09d61395a1908e2c02825ac6 550 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 472 3.4E-79 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_3667 4eac306a09d61395a1908e2c02825ac6 550 PIRSF PIRSF002741 1 548 4.5E-101 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_3667 4eac306a09d61395a1908e2c02825ac6 550 Gene3D G3DSA:3.10.105.10 295 522 5.8E-160 T 13-10-2018 TREPR_2504 264ed5600fc5be1d52c7d03186c96c24 343 SUPERFAMILY SSF52540 1 220 1.52E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2504 264ed5600fc5be1d52c7d03186c96c24 343 SMART SM00382 26 207 1.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2504 264ed5600fc5be1d52c7d03186c96c24 343 Pfam PF00005 ABC transporter 17 161 4.8E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2504 264ed5600fc5be1d52c7d03186c96c24 343 Gene3D G3DSA:3.40.50.300 1 227 6.0E-67 T 13-10-2018 TREPR_3787 5348e1d58a27c5f6779a5e9edbba6169 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 90 104 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3787 5348e1d58a27c5f6779a5e9edbba6169 239 SUPERFAMILY SSF56104 5 238 5.56E-83 T 13-10-2018 TREPR_3787 5348e1d58a27c5f6779a5e9edbba6169 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 8 237 1.1E-71 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 TREPR_3787 5348e1d58a27c5f6779a5e9edbba6169 239 Gene3D G3DSA:3.30.470.20 89 226 7.6E-96 T 13-10-2018 TREPR_3787 5348e1d58a27c5f6779a5e9edbba6169 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 177 185 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3787 5348e1d58a27c5f6779a5e9edbba6169 239 Gene3D G3DSA:3.30.200.20 10 237 7.6E-96 T 13-10-2018 TREPR_3787 5348e1d58a27c5f6779a5e9edbba6169 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 7 239 31.749 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3787 5348e1d58a27c5f6779a5e9edbba6169 239 Pfam PF01259 SAICAR synthetase 10 236 1.3E-70 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_3305 38002740c1ff13381c342fdb4c167591 223 SUPERFAMILY SSF81301 23 215 3.6E-54 T 13-10-2018 TREPR_3305 38002740c1ff13381c342fdb4c167591 223 SMART SM00954 61 184 1.1E-41 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 TREPR_3305 38002740c1ff13381c342fdb4c167591 223 Gene3D G3DSA:3.30.460.10 15 166 8.5E-51 T 13-10-2018 TREPR_3305 38002740c1ff13381c342fdb4c167591 223 Pfam PF04607 Region found in RelA / SpoT proteins 61 181 1.1E-34 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 TREPR_3305 38002740c1ff13381c342fdb4c167591 223 Gene3D G3DSA:1.10.287.860 167 223 1.5E-12 T 13-10-2018 TREPR_3360 a2a6377ba370769b10d032454a50ab5c 405 SUPERFAMILY SSF52218 258 400 1.4E-27 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_3360 a2a6377ba370769b10d032454a50ab5c 405 SMART SM00849 34 231 2.3E-21 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_3360 a2a6377ba370769b10d032454a50ab5c 405 PIRSF PIRSF005243 1 403 1.5E-109 T 13-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 TREPR_3360 a2a6377ba370769b10d032454a50ab5c 405 Pfam PF00753 Metallo-beta-lactamase superfamily 36 171 3.2E-6 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_3360 a2a6377ba370769b10d032454a50ab5c 405 Gene3D G3DSA:3.40.50.360 255 395 3.9E-30 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_3360 a2a6377ba370769b10d032454a50ab5c 405 SUPERFAMILY SSF56281 3 290 1.45E-43 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_3360 a2a6377ba370769b10d032454a50ab5c 405 Gene3D G3DSA:3.60.15.10 1 251 2.5E-77 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 SUPERFAMILY SSF51735 4 176 8.35E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 Gene3D G3DSA:3.40.50.720 4 366 4.4E-115 T 13-10-2018 TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 374 40.22 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 168 351 1.8E-13 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 273 6.4E-75 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 SUPERFAMILY SSF55347 153 348 2.09E-40 T 13-10-2018 TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 Gene3D G3DSA:3.30.360.10 151 348 4.4E-115 T 13-10-2018 TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 148 164 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 139 3.0E-29 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TREPR_3332 87ba32ad110e3ba86a194c7148f49b12 380 SMART SM00859 2 140 5.5E-34 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TREPR_2749 2438d87669fb0cffed5c7e5c6c222125 392 SUPERFAMILY SSF54919 5 161 4.06E-10 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_2749 2438d87669fb0cffed5c7e5c6c222125 392 Pfam PF00334 Nucleoside diphosphate kinase 184 235 3.0E-6 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_2749 2438d87669fb0cffed5c7e5c6c222125 392 Pfam PF00334 Nucleoside diphosphate kinase 275 372 2.1E-15 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_2749 2438d87669fb0cffed5c7e5c6c222125 392 SUPERFAMILY SSF54919 183 372 1.17E-31 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_2749 2438d87669fb0cffed5c7e5c6c222125 392 Gene3D G3DSA:3.30.70.141 1 171 4.0E-6 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_2749 2438d87669fb0cffed5c7e5c6c222125 392 Gene3D G3DSA:3.30.70.141 172 380 1.0E-35 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_2749 2438d87669fb0cffed5c7e5c6c222125 392 SMART SM00562 183 382 1.1E-13 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 SUPERFAMILY SSF52980 861 1021 1.34E-9 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 Pfam PF13361 UvrD-like helicase C-terminal domain 402 542 5.3E-14 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 Gene3D G3DSA:3.40.50.300 454 546 2.8E-10 T 13-10-2018 TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 Gene3D G3DSA:3.40.50.300 2 140 1.7E-23 T 13-10-2018 TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 Gene3D G3DSA:3.40.50.300 282 419 3.8E-28 T 13-10-2018 TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 SUPERFAMILY SSF52540 4 777 5.73E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 386 9.6E-42 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 Gene3D G3DSA:3.90.320.10 884 1045 6.0E-9 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 Pfam PF12705 PD-(D/E)XK nuclease superfamily 891 1042 7.6E-6 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TREPR_1818 079e57deb34910e474f05808fd4cf65b 1052 Pfam PF13361 UvrD-like helicase C-terminal domain 647 773 2.7E-14 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 Gene3D G3DSA:3.40.50.720 2 265 5.4E-68 T 13-10-2018 TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 SUPERFAMILY SSF51735 2 246 3.85E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.5E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.5E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.5E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_2177 81437c0ca7f7a2f01913847cc9cb0e41 265 Pfam PF00106 short chain dehydrogenase 3 188 1.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_2634 22343aed82157934fde41770b77136b6 221 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 13-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TREPR_2634 22343aed82157934fde41770b77136b6 221 SUPERFAMILY SSF52540 7 203 4.76E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2634 22343aed82157934fde41770b77136b6 221 Gene3D G3DSA:3.40.50.300 5 206 6.5E-44 T 13-10-2018 TREPR_2634 22343aed82157934fde41770b77136b6 221 Pfam PF02223 Thymidylate kinase 10 197 2.4E-33 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 TREPR_2634 22343aed82157934fde41770b77136b6 221 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 197 1.3E-37 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TREPR_2634 22343aed82157934fde41770b77136b6 221 Hamap MF_00165 Thymidylate kinase [tmk]. 6 205 19.25 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 SUPERFAMILY SSF52172 699 821 2.13E-34 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 Gene3D G3DSA:3.30.565.10 512 676 2.1E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 Gene3D G3DSA:3.30.450.20 196 258 2.2E-16 T 13-10-2018 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 SUPERFAMILY SSF47384 433 512 8.44E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 Pfam PF00072 Response regulator receiver domain 702 816 4.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 Gene3D G3DSA:3.30.450.20 259 368 2.2E-16 T 13-10-2018 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 SMART SM00387 558 675 1.0E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 Pfam PF02743 Cache domain 158 367 6.8E-19 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 Pfam PF00512 His Kinase A (phospho-acceptor) domain 446 511 2.1E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 SUPERFAMILY SSF55874 500 671 7.47E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 Gene3D G3DSA:1.10.287.130 435 511 5.3E-21 T 13-10-2018 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 674 3.2E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 Gene3D G3DSA:3.40.50.12740 700 825 3.2E-39 T 13-10-2018 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 SMART SM00448 700 816 1.2E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 SMART SM00388 446 511 3.2E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 653 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1879 3ae15c048277ae3bcd62be2390d7eaf8 825 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 672 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 232 258 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 SUPERFAMILY SSF88659 175 264 8.04E-23 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 Pfam PF04539 Sigma-70 region 3 118 191 1.6E-9 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 SUPERFAMILY SSF88946 14 110 1.48E-28 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 Pfam PF04545 Sigma-70, region 4 211 260 9.6E-19 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 Gene3D G3DSA:1.20.140.160 109 265 6.2E-50 T 13-10-2018 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 PIRSF PIRSF000770 13 269 2.6E-60 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 SUPERFAMILY SSF88659 111 188 2.75E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 PRINTS PR00046 Major sigma-70 factor signature 89 97 1.1E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 PRINTS PR00046 Major sigma-70 factor signature 65 78 1.1E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 PRINTS PR00046 Major sigma-70 factor signature 232 247 1.1E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 PRINTS PR00046 Major sigma-70 factor signature 215 227 1.1E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 PRINTS PR00046 Major sigma-70 factor signature 247 258 1.1E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 38 263 1.8E-89 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 Pfam PF04542 Sigma-70 region 2 38 110 2.5E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 262 9.5E-39 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_2845 e6a077fac46a980cfe2930e4ab065ea3 270 Gene3D G3DSA:1.10.1740.10 22 108 3.5E-32 T 13-10-2018 TREPR_1209 c2810495dc8f8f1f63406f0fd44249e5 351 Pfam PF08544 GHMP kinases C terminal 287 331 1.1E-4 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain TREPR_1209 c2810495dc8f8f1f63406f0fd44249e5 351 Gene3D G3DSA:3.30.230.10 20 208 3.4E-48 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_1209 c2810495dc8f8f1f63406f0fd44249e5 351 Pfam PF00288 GHMP kinases N terminal domain 125 178 2.1E-7 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TREPR_1209 c2810495dc8f8f1f63406f0fd44249e5 351 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 33 348 28.358 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TREPR_1209 c2810495dc8f8f1f63406f0fd44249e5 351 Gene3D G3DSA:3.30.70.890 212 338 4.4E-17 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TREPR_1209 c2810495dc8f8f1f63406f0fd44249e5 351 SUPERFAMILY SSF55060 213 329 3.88E-12 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TREPR_1209 c2810495dc8f8f1f63406f0fd44249e5 351 SUPERFAMILY SSF54211 34 180 1.71E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 Gene3D G3DSA:1.10.10.60 400 445 2.9E-12 T 13-10-2018 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 SMART SM00448 3 114 4.4E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 Pfam PF02954 Bacterial regulatory protein, Fis family 404 443 2.5E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 SUPERFAMILY SSF52172 3 188 6.55E-46 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 Gene3D G3DSA:3.40.50.2300 2 138 1.9E-39 T 13-10-2018 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 SMART SM00382 163 306 2.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 Pfam PF00072 Response regulator receiver domain 6 111 1.9E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 8.4E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 8.4E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 Gene3D G3DSA:1.10.8.60 314 392 4.1E-26 T 13-10-2018 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 Gene3D G3DSA:3.40.50.300 139 313 7.0E-63 T 13-10-2018 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 SUPERFAMILY SSF46689 356 444 4.48E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 Pfam PF00158 Sigma-54 interaction domain 143 310 3.9E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 SUPERFAMILY SSF52540 143 386 2.88E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TREPR_2229 2aabe6a00d5f297721700945eef3df03 452 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TREPR_3359 af5b5a4d4b2df8b3bbcc54d0451a7f49 378 SUPERFAMILY SSF51556 50 343 2.97E-82 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_3359 af5b5a4d4b2df8b3bbcc54d0451a7f49 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 2 371 1.4E-124 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 TREPR_3359 af5b5a4d4b2df8b3bbcc54d0451a7f49 378 PIRSF PIRSF038994 2 378 1.4E-118 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 TREPR_3359 af5b5a4d4b2df8b3bbcc54d0451a7f49 378 Pfam PF01979 Amidohydrolase family 46 368 3.0E-28 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TREPR_3359 af5b5a4d4b2df8b3bbcc54d0451a7f49 378 Gene3D G3DSA:2.30.40.10 5 372 5.0E-116 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_3359 af5b5a4d4b2df8b3bbcc54d0451a7f49 378 Gene3D G3DSA:3.20.20.140 50 345 5.0E-116 T 13-10-2018 TREPR_3359 af5b5a4d4b2df8b3bbcc54d0451a7f49 378 SUPERFAMILY SSF51338 8 366 1.89E-11 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 8.3E-38 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 8.3E-38 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 8.3E-38 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 8.3E-38 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 9.5E-61 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.2E-50 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 SUPERFAMILY SSF54686 1 138 1.83E-56 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.482 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 Gene3D G3DSA:3.90.1170.10 1 140 4.6E-54 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_1484 94fba847faf75742bd7db0214759e77b 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1125 85ac1f7d8892b1a0789916d1b2fa179a 268 Gene3D G3DSA:3.40.50.300 4 263 2.7E-60 T 13-10-2018 TREPR_1125 85ac1f7d8892b1a0789916d1b2fa179a 268 SMART SM00382 33 238 2.2E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1125 85ac1f7d8892b1a0789916d1b2fa179a 268 SUPERFAMILY SSF52540 8 262 6.41E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1125 85ac1f7d8892b1a0789916d1b2fa179a 268 Pfam PF00005 ABC transporter 26 189 6.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1125 85ac1f7d8892b1a0789916d1b2fa179a 268 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 239 261 1.5E-11 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TREPR_1946 83674955bbf6df37474f6cb4e7f6f65a 136 SMART SM00411 9 99 3.6E-32 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TREPR_1946 83674955bbf6df37474f6cb4e7f6f65a 136 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 54 74 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TREPR_1946 83674955bbf6df37474f6cb4e7f6f65a 136 Pfam PF00216 Bacterial DNA-binding protein 9 98 6.2E-26 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TREPR_1946 83674955bbf6df37474f6cb4e7f6f65a 136 SUPERFAMILY SSF47729 9 101 2.21E-23 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TREPR_1946 83674955bbf6df37474f6cb4e7f6f65a 136 PRINTS PR01727 Prokaryotic integration host factor signature 48 63 1.8E-12 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TREPR_1946 83674955bbf6df37474f6cb4e7f6f65a 136 PRINTS PR01727 Prokaryotic integration host factor signature 67 80 1.8E-12 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TREPR_1946 83674955bbf6df37474f6cb4e7f6f65a 136 PRINTS PR01727 Prokaryotic integration host factor signature 83 97 1.8E-12 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TREPR_1946 83674955bbf6df37474f6cb4e7f6f65a 136 Gene3D G3DSA:4.10.520.10 2 102 3.6E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 Gene3D G3DSA:3.30.70.1560 172 245 6.5E-46 T 13-10-2018 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 SMART SM00363 44 101 1.3E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 109 264 6.9E-38 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 SUPERFAMILY SSF55174 44 99 1.53E-13 T 13-10-2018 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 142 156 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 Gene3D G3DSA:3.10.290.10 43 106 5.0E-21 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 Gene3D G3DSA:3.30.70.580 107 267 6.5E-46 T 13-10-2018 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 Pfam PF00849 RNA pseudouridylate synthase 105 232 2.9E-14 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 SUPERFAMILY SSF55120 104 269 3.45E-33 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_2340 370916b4d118b8f0832675b45ddba074 280 Pfam PF01479 S4 domain 45 90 1.7E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_2243 3240ca0a864053a9f2d2863f9d87f76f 311 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 45 301 1.3E-57 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TREPR_2243 3240ca0a864053a9f2d2863f9d87f76f 311 Gene3D G3DSA:3.40.50.300 69 242 1.9E-43 T 13-10-2018 TREPR_2243 3240ca0a864053a9f2d2863f9d87f76f 311 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 1 309 29.644 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TREPR_2243 3240ca0a864053a9f2d2863f9d87f76f 311 Pfam PF03193 RsgA GTPase 67 241 4.4E-45 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 TREPR_2243 3240ca0a864053a9f2d2863f9d87f76f 311 SUPERFAMILY SSF50249 1 70 1.37E-5 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2243 3240ca0a864053a9f2d2863f9d87f76f 311 Gene3D G3DSA:1.10.40.50 245 311 2.5E-15 T 13-10-2018 TREPR_2243 3240ca0a864053a9f2d2863f9d87f76f 311 SUPERFAMILY SSF52540 84 306 1.45E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3562 415b9f5cd71b8b582c5464e829840e27 215 Pfam PF00753 Metallo-beta-lactamase superfamily 11 201 4.8E-28 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_3562 415b9f5cd71b8b582c5464e829840e27 215 SUPERFAMILY SSF56281 9 210 1.1E-44 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_3562 415b9f5cd71b8b582c5464e829840e27 215 SMART SM00849 11 201 3.1E-30 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_3562 415b9f5cd71b8b582c5464e829840e27 215 Gene3D G3DSA:3.60.15.10 1 213 3.2E-55 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2690 13fbd5d0c0d0e46c2c4a8f2b5eb49475 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 76 6.0E-17 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TREPR_2690 13fbd5d0c0d0e46c2c4a8f2b5eb49475 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.253 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TREPR_2690 13fbd5d0c0d0e46c2c4a8f2b5eb49475 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 5.6E-31 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TREPR_2690 13fbd5d0c0d0e46c2c4a8f2b5eb49475 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.9E-15 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain TREPR_2690 13fbd5d0c0d0e46c2c4a8f2b5eb49475 78 SUPERFAMILY SSF47336 1 77 7.2E-22 T 13-10-2018 IPR036736 ACP-like superfamily TREPR_2690 13fbd5d0c0d0e46c2c4a8f2b5eb49475 78 Gene3D G3DSA:1.10.1200.10 1 78 7.7E-27 T 13-10-2018 IPR036736 ACP-like superfamily TREPR_0144 c7c8c7e30e47861ebb784b1a22d2cd80 341 Gene3D G3DSA:3.60.70.12 2 324 4.6E-98 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TREPR_0144 c7c8c7e30e47861ebb784b1a22d2cd80 341 Pfam PF03576 Peptidase family S58 10 328 2.8E-43 T 13-10-2018 IPR005321 Peptidase S58, DmpA TREPR_0144 c7c8c7e30e47861ebb784b1a22d2cd80 341 SUPERFAMILY SSF56266 10 331 8.89E-58 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TREPR_2614 65aa517afe280b2d59d195e049cf3e1c 59 SUPERFAMILY SSF54786 1 59 5.89E-17 T 13-10-2018 TREPR_2614 65aa517afe280b2d59d195e049cf3e1c 59 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 3 57 1.5E-15 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TREPR_2614 65aa517afe280b2d59d195e049cf3e1c 59 Gene3D G3DSA:3.30.920.30 1 59 2.1E-16 T 13-10-2018 IPR038570 HicA superfamily TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 SUPERFAMILY SSF54001 349 473 7.15E-22 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 SUPERFAMILY SSF81296 23 99 6.38E-10 T 13-10-2018 IPR014756 Immunoglobulin E-set TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 SMART SM00460 396 458 1.6E-11 T 13-10-2018 IPR002931 Transglutaminase-like TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 Gene3D G3DSA:3.10.620.30 320 471 9.8E-18 T 13-10-2018 TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 SUPERFAMILY SSF81296 122 216 4.82E-6 T 13-10-2018 IPR014756 Immunoglobulin E-set TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 Gene3D G3DSA:2.60.40.10 21 104 5.9E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 Pfam PF01833 IPT/TIG domain 122 156 4.0E-4 T 13-10-2018 IPR002909 IPT domain TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 Pfam PF01833 IPT/TIG domain 24 99 1.6E-6 T 13-10-2018 IPR002909 IPT domain TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 Gene3D G3DSA:2.60.40.10 121 219 5.9E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1623 b2e81ed8ded4aef28c3f9e4fc8f9b27b 542 Pfam PF01841 Transglutaminase-like superfamily 357 456 5.7E-18 T 13-10-2018 IPR002931 Transglutaminase-like TREPR_0154 cebabf34bc4c6d216d2473ca527026a6 602 Gene3D G3DSA:3.40.50.300 353 542 7.3E-30 T 13-10-2018 TREPR_0154 cebabf34bc4c6d216d2473ca527026a6 602 SMART SM00382 383 524 3.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0154 cebabf34bc4c6d216d2473ca527026a6 602 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 388 520 1.1E-20 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_0154 cebabf34bc4c6d216d2473ca527026a6 602 SUPERFAMILY SSF52540 374 572 1.43E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2477 add97e711201a4acb3a80a9e21b7ff4b 163 Gene3D G3DSA:3.40.140.10 7 162 3.0E-43 T 13-10-2018 TREPR_2477 add97e711201a4acb3a80a9e21b7ff4b 163 PIRSF PIRSF006019 1 163 6.7E-44 T 13-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TREPR_2477 add97e711201a4acb3a80a9e21b7ff4b 163 SUPERFAMILY SSF53927 12 155 1.52E-32 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TREPR_2477 add97e711201a4acb3a80a9e21b7ff4b 163 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 84 119 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TREPR_2477 add97e711201a4acb3a80a9e21b7ff4b 163 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 129 4.2E-28 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TREPR_1231 ab6ea8549008b36f9172f1795e81402b 76 PRINTS PR00124 ATP synthase C subunit signature 30 45 7.2E-20 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1231 ab6ea8549008b36f9172f1795e81402b 76 PRINTS PR00124 ATP synthase C subunit signature 9 28 7.2E-20 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1231 ab6ea8549008b36f9172f1795e81402b 76 PRINTS PR00124 ATP synthase C subunit signature 47 72 7.2E-20 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1231 ab6ea8549008b36f9172f1795e81402b 76 SUPERFAMILY SSF81333 6 74 1.83E-19 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TREPR_1231 ab6ea8549008b36f9172f1795e81402b 76 Pfam PF00137 ATP synthase subunit C 9 71 2.4E-15 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TREPR_1231 ab6ea8549008b36f9172f1795e81402b 76 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 72 1.5E-15 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TREPR_1231 ab6ea8549008b36f9172f1795e81402b 76 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1231 ab6ea8549008b36f9172f1795e81402b 76 Hamap MF_01396 ATP synthase subunit c [atpH]. 4 72 15.311 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1231 ab6ea8549008b36f9172f1795e81402b 76 Gene3D G3DSA:1.20.20.10 2 73 1.7E-22 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 Pfam PF01926 50S ribosome-binding GTPase 15 138 5.6E-20 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 Pfam PF01926 50S ribosome-binding GTPase 197 315 3.9E-25 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 Hamap MF_00195 GTPase Der [der]. 12 460 32.514 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 PIRSF PIRSF006485 11 463 5.6E-134 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 376 453 4.4E-20 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 Gene3D G3DSA:3.40.50.300 191 370 4.8E-50 T 13-10-2018 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 SUPERFAMILY SSF52540 156 452 4.6E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 Gene3D G3DSA:3.30.300.20 374 455 1.5E-18 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 Gene3D G3DSA:3.40.50.300 7 188 1.5E-33 T 13-10-2018 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 198 218 5.5E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 5.5E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 13 452 1.1E-137 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 195 362 1.4E-32 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 173 2.0E-17 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_3188 df4a896a765dcc5e433b474b3fca7dca 525 SUPERFAMILY SSF52540 13 181 7.55E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1369 416249c19cb6bb24743484b72be917d4 421 Gene3D G3DSA:2.40.30.130 1 81 1.9E-24 T 13-10-2018 TREPR_1369 416249c19cb6bb24743484b72be917d4 421 Pfam PF02272 DHHA1 domain 281 418 8.1E-8 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TREPR_1369 416249c19cb6bb24743484b72be917d4 421 Pfam PF01411 tRNA synthetases class II (A) 28 75 3.2E-7 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TREPR_1369 416249c19cb6bb24743484b72be917d4 421 Gene3D G3DSA:3.30.980.10 90 248 9.8E-39 T 13-10-2018 TREPR_1369 416249c19cb6bb24743484b72be917d4 421 SMART SM00863 192 234 2.6E-10 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TREPR_1369 416249c19cb6bb24743484b72be917d4 421 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 192 233 4.3E-9 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TREPR_1369 416249c19cb6bb24743484b72be917d4 421 SUPERFAMILY SSF55186 93 240 2.22E-27 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TREPR_1369 416249c19cb6bb24743484b72be917d4 421 SUPERFAMILY SSF50447 1 73 5.3E-16 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 Gene3D G3DSA:1.10.10.60 397 452 5.8E-17 T 13-10-2018 TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 Pfam PF04963 Sigma-54 factor, core binding domain 100 279 7.4E-44 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 PRINTS PR00045 Sigma-54 factor signature 371 382 1.0E-15 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 PRINTS PR00045 Sigma-54 factor signature 168 185 1.0E-15 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 PRINTS PR00045 Sigma-54 factor signature 355 367 1.0E-15 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 PRINTS PR00045 Sigma-54 factor signature 429 447 1.0E-15 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 PIRSF PIRSF000774 2 452 3.8E-121 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 452 2.8E-115 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 Pfam PF04552 Sigma-54, DNA binding domain 296 452 8.9E-53 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 434 441 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 Gene3D G3DSA:1.10.10.1330 104 225 1.5E-13 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily TREPR_2731 ecfb8b70273da76ffc0c53490a9d69fc 452 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 10 50 4.8E-14 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TREPR_1364 0f0d13d18e7473f847a40ca0b6fd3ece 352 Gene3D G3DSA:3.40.50.720 1 159 3.0E-26 T 13-10-2018 TREPR_1364 0f0d13d18e7473f847a40ca0b6fd3ece 352 SUPERFAMILY SSF51735 4 142 2.95E-14 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1170 032e3db30e2d9a0646b038e22b2016a4 392 Gene3D G3DSA:3.20.20.300 39 389 3.6E-75 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TREPR_1170 032e3db30e2d9a0646b038e22b2016a4 392 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 70 382 3.7E-47 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TREPR_1170 032e3db30e2d9a0646b038e22b2016a4 392 SUPERFAMILY SSF51445 64 392 2.11E-61 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_2631 5e57c2c41ff4e45c5bc75bf5ebd1e60d 176 Gene3D G3DSA:3.30.910.20 16 176 8.9E-22 T 13-10-2018 IPR024930 Skp domain superfamily TREPR_2631 5e57c2c41ff4e45c5bc75bf5ebd1e60d 176 Pfam PF03938 Outer membrane protein (OmpH-like) 10 170 1.6E-24 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TREPR_2631 5e57c2c41ff4e45c5bc75bf5ebd1e60d 176 SUPERFAMILY SSF111384 24 170 1.1E-16 T 13-10-2018 TREPR_2631 5e57c2c41ff4e45c5bc75bf5ebd1e60d 176 SMART SM00935 11 171 1.9E-11 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 Gene3D G3DSA:3.80.10.10 256 363 3.7E-13 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 Gene3D G3DSA:3.10.20.660 37 122 5.5E-5 T 13-10-2018 TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 38 117 7.1E-7 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 Gene3D G3DSA:3.80.10.10 532 751 5.4E-49 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 Gene3D G3DSA:3.80.10.10 376 530 2.8E-14 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 SUPERFAMILY SSF52058 284 725 1.36E-6 T 13-10-2018 TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 Pfam PF13306 Leucine rich repeats (6 copies) 465 521 0.0035 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 Pfam PF13306 Leucine rich repeats (6 copies) 538 658 7.8E-27 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 Pfam PF13306 Leucine rich repeats (6 copies) 283 346 1.0E-9 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_3238 2a68906f41b9cafb63669a6b9eec1649 792 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 76 122 2.3E-5 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Gene3D G3DSA:3.40.50.620 42 594 2.2E-273 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Gene3D G3DSA:1.10.730.10 622 764 1.7E-38 T 13-10-2018 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 SUPERFAMILY SSF52374 8 633 4.33E-141 T 13-10-2018 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 SUPERFAMILY SSF50677 233 433 1.47E-53 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 435 625 5.9E-17 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Gene3D G3DSA:3.10.20.590 768 828 1.4E-19 T 13-10-2018 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Pfam PF08264 Anticodon-binding domain of tRNA 682 789 4.2E-10 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 SUPERFAMILY SSF47323 642 829 7.66E-27 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 228 421 1.0E-65 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 10 829 0.0 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Pfam PF09334 tRNA synthetases class I (M) 48 190 3.9E-20 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Gene3D G3DSA:3.90.740.10 235 433 2.2E-273 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Gene3D G3DSA:2.30.210.10 595 610 2.2E-273 T 13-10-2018 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 161 177 6.4E-55 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 580 590 6.4E-55 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 547 569 6.4E-55 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 193 206 6.4E-55 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 222 241 6.4E-55 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 508 526 6.4E-55 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 135 152 6.4E-55 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 51 61 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3229 5b201f089176eddaa95d00c02b92ed10 829 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 8 828 22.766 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TREPR_2412 8233ce7bf5df9c7b4429ee4c7cd118b6 177 SUPERFAMILY SSF52540 1 175 2.89E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2412 8233ce7bf5df9c7b4429ee4c7cd118b6 177 Pfam PF13189 Cytidylate kinase-like family 7 157 2.3E-14 T 13-10-2018 TREPR_2412 8233ce7bf5df9c7b4429ee4c7cd118b6 177 Hamap MF_00239 Cytidylate kinase [cmk]. 5 176 43.382 T 13-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TREPR_2412 8233ce7bf5df9c7b4429ee4c7cd118b6 177 TIGRFAM TIGR02173 cyt_kin_arch: putative cytidylate kinase 6 172 3.8E-42 T 13-10-2018 IPR011892 Cytidylate kinase, putative GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TREPR_2412 8233ce7bf5df9c7b4429ee4c7cd118b6 177 Gene3D G3DSA:3.40.50.300 1 176 2.5E-35 T 13-10-2018 TREPR_1719 5a3ba0d9e2a6ec22699a244ca60a882b 249 Pfam PF00834 Ribulose-phosphate 3 epimerase family 39 235 1.6E-68 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TREPR_1719 5a3ba0d9e2a6ec22699a244ca60a882b 249 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 39 247 3.4E-76 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TREPR_1719 5a3ba0d9e2a6ec22699a244ca60a882b 249 SUPERFAMILY SSF51366 34 247 3.24E-62 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TREPR_1719 5a3ba0d9e2a6ec22699a244ca60a882b 249 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 66 80 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TREPR_1719 5a3ba0d9e2a6ec22699a244ca60a882b 249 PIRSF PIRSF001461 33 249 3.8E-82 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TREPR_1719 5a3ba0d9e2a6ec22699a244ca60a882b 249 Gene3D G3DSA:3.20.20.70 30 249 4.0E-78 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1109 07fccb302629d9a65ee976ddae107d66 372 Pfam PF13534 4Fe-4S dicluster domain 291 357 1.0E-9 T 13-10-2018 TREPR_1109 07fccb302629d9a65ee976ddae107d66 372 Gene3D G3DSA:1.10.1060.10 283 371 3.7E-15 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_1109 07fccb302629d9a65ee976ddae107d66 372 Gene3D G3DSA:3.20.20.100 1 281 8.6E-45 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_1109 07fccb302629d9a65ee976ddae107d66 372 Pfam PF00248 Aldo/keto reductase family 10 279 5.6E-40 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain TREPR_1109 07fccb302629d9a65ee976ddae107d66 372 SUPERFAMILY SSF51430 4 282 4.19E-49 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_1109 07fccb302629d9a65ee976ddae107d66 372 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 343 354 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1109 07fccb302629d9a65ee976ddae107d66 372 SUPERFAMILY SSF46548 255 369 3.87E-10 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_1139 6c74bfcb744db0e15c035513fcb1bbb3 233 Gene3D G3DSA:3.40.50.150 20 229 4.8E-40 T 13-10-2018 TREPR_1139 6c74bfcb744db0e15c035513fcb1bbb3 233 Pfam PF08241 Methyltransferase domain 61 156 5.5E-16 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TREPR_1139 6c74bfcb744db0e15c035513fcb1bbb3 233 SUPERFAMILY SSF53335 20 217 8.67E-29 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2465 427e56d2f3923b9b618d95e6f8b87b35 521 TIGRFAM TIGR04321 spiroSPASM: spiro-SPASM protein 4 521 5.3E-169 T 13-10-2018 IPR027608 Spirochetes SPASM protein TREPR_2465 427e56d2f3923b9b618d95e6f8b87b35 521 SUPERFAMILY SSF102114 229 513 1.96E-16 T 13-10-2018 TREPR_2465 427e56d2f3923b9b618d95e6f8b87b35 521 Gene3D G3DSA:3.20.20.70 226 520 3.1E-20 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2465 427e56d2f3923b9b618d95e6f8b87b35 521 Pfam PF13186 Iron-sulfur cluster-binding domain 441 513 2.3E-4 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain TREPR_0268 ed5c3ab1dda198eb8c3e82f4fd1ac103 515 Pfam PF00005 ABC transporter 39 189 2.7E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0268 ed5c3ab1dda198eb8c3e82f4fd1ac103 515 SUPERFAMILY SSF52540 265 497 5.96E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0268 ed5c3ab1dda198eb8c3e82f4fd1ac103 515 Gene3D G3DSA:3.40.50.300 264 513 8.0E-42 T 13-10-2018 TREPR_0268 ed5c3ab1dda198eb8c3e82f4fd1ac103 515 SMART SM00382 299 493 2.9E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0268 ed5c3ab1dda198eb8c3e82f4fd1ac103 515 SMART SM00382 48 237 3.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0268 ed5c3ab1dda198eb8c3e82f4fd1ac103 515 Pfam PF00005 ABC transporter 290 444 2.9E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0268 ed5c3ab1dda198eb8c3e82f4fd1ac103 515 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0268 ed5c3ab1dda198eb8c3e82f4fd1ac103 515 SUPERFAMILY SSF52540 24 246 1.39E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0268 ed5c3ab1dda198eb8c3e82f4fd1ac103 515 Gene3D G3DSA:3.40.50.300 18 249 8.6E-53 T 13-10-2018 TREPR_0234 9af36addc6d6dbfda0b1593236ddd50c 517 Pfam PF00005 ABC transporter 276 432 6.0E-11 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0234 9af36addc6d6dbfda0b1593236ddd50c 517 SMART SM00382 28 216 4.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0234 9af36addc6d6dbfda0b1593236ddd50c 517 Gene3D G3DSA:3.40.50.300 257 491 1.7E-33 T 13-10-2018 TREPR_0234 9af36addc6d6dbfda0b1593236ddd50c 517 Gene3D G3DSA:3.40.50.300 1 235 7.6E-47 T 13-10-2018 TREPR_0234 9af36addc6d6dbfda0b1593236ddd50c 517 Pfam PF00005 ABC transporter 19 168 1.6E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0234 9af36addc6d6dbfda0b1593236ddd50c 517 SUPERFAMILY SSF52540 260 495 3.55E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0234 9af36addc6d6dbfda0b1593236ddd50c 517 SUPERFAMILY SSF52540 2 226 7.7E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0889 0e6435c37b68d2ec29cd1273a5752c9d 353 Gene3D G3DSA:3.40.50.300 15 205 3.8E-11 T 13-10-2018 TREPR_0889 0e6435c37b68d2ec29cd1273a5752c9d 353 Pfam PF13479 AAA domain 13 201 1.5E-29 T 13-10-2018 TREPR_0889 0e6435c37b68d2ec29cd1273a5752c9d 353 SUPERFAMILY SSF52540 15 104 1.25E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0889 0e6435c37b68d2ec29cd1273a5752c9d 353 SMART SM00382 11 160 6.1E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1374 bc35b8be0591ae2b6969ec99d0ad1830 331 SMART SM00382 36 236 7.4E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1374 bc35b8be0591ae2b6969ec99d0ad1830 331 Gene3D G3DSA:3.40.50.300 5 327 1.3E-96 T 13-10-2018 TREPR_1374 bc35b8be0591ae2b6969ec99d0ad1830 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 302 9.7E-21 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1374 bc35b8be0591ae2b6969ec99d0ad1830 331 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1374 bc35b8be0591ae2b6969ec99d0ad1830 331 Pfam PF00005 ABC transporter 28 186 3.8E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1374 bc35b8be0591ae2b6969ec99d0ad1830 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 320 7.5E-26 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1374 bc35b8be0591ae2b6969ec99d0ad1830 331 SUPERFAMILY SSF52540 7 256 1.09E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Gene3D G3DSA:3.40.50.300 2 291 5.2E-104 T 13-10-2018 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 SUPERFAMILY SSF52540 4 281 1.4E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 SUPERFAMILY SSF54211 476 595 5.82E-36 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.4E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 SMART SM00838 596 683 8.0E-39 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Pfam PF14492 Elongation Factor G, domain II 401 474 5.6E-33 T 13-10-2018 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Gene3D G3DSA:3.30.230.10 481 682 1.5E-76 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Pfam PF03144 Elongation factor Tu domain 2 322 388 5.1E-13 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 SUPERFAMILY SSF54980 399 477 1.8E-23 T 13-10-2018 IPR035647 EF-G domain III/V-like TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Gene3D G3DSA:3.30.70.870 403 477 4.2E-29 T 13-10-2018 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Gene3D G3DSA:3.30.70.240 600 670 1.5E-76 T 13-10-2018 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Pfam PF03764 Elongation factor G, domain IV 476 594 1.2E-37 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Pfam PF00679 Elongation factor G C-terminus 597 681 7.3E-27 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 180 7.9E-26 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 SUPERFAMILY SSF50447 249 399 1.44E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Hamap MF_00054_B Elongation factor G [fusA]. 4 687 104.982 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 687 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Gene3D G3DSA:2.40.30.10 292 402 2.3E-29 T 13-10-2018 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 Pfam PF00009 Elongation factor Tu GTP binding domain 7 280 1.1E-61 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 SUPERFAMILY SSF54980 599 688 2.73E-24 T 13-10-2018 IPR035647 EF-G domain III/V-like TREPR_2997 22b020802b9c36d45841906b72fab7f7 697 SMART SM00889 477 594 9.8E-55 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 SUPERFAMILY SSF53067 1 196 1.36E-61 T 13-10-2018 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 SUPERFAMILY SSF53067 159 399 7.38E-84 T 13-10-2018 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 Pfam PF00871 Acetokinase family 3 391 3.8E-140 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 Gene3D G3DSA:3.30.420.40 1 196 4.5E-66 T 13-10-2018 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 PIRSF PIRSF000722 1 402 1.2E-137 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 Hamap MF_00020 Acetate kinase [ackA]. 1 402 171.882 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 PRINTS PR00471 Acetate kinase family signature 204 225 8.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 PRINTS PR00471 Acetate kinase family signature 323 339 8.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 PRINTS PR00471 Acetate kinase family signature 380 392 8.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 PRINTS PR00471 Acetate kinase family signature 174 187 8.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 PRINTS PR00471 Acetate kinase family signature 301 314 8.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 PRINTS PR00471 Acetate kinase family signature 3 14 8.4E-40 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 Gene3D G3DSA:3.30.420.40 198 407 4.1E-74 T 13-10-2018 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_1176 4213c5447a703250f581994056ea7d7b 445 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 1.9E-149 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 TREPR_3486 7f47e848adfe9e9a12af8c72faed06d9 231 Gene3D G3DSA:3.20.20.10 1 231 2.4E-71 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_3486 7f47e848adfe9e9a12af8c72faed06d9 231 SUPERFAMILY SSF51419 2 227 8.11E-61 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_3486 7f47e848adfe9e9a12af8c72faed06d9 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 5 229 3.4E-47 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TREPR_3486 7f47e848adfe9e9a12af8c72faed06d9 231 PIRSF PIRSF004848 2 231 2.1E-60 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TREPR_3486 7f47e848adfe9e9a12af8c72faed06d9 231 Pfam PF01168 Alanine racemase, N-terminal domain 9 229 3.2E-21 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_3486 7f47e848adfe9e9a12af8c72faed06d9 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 228 25.227 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TREPR_1494 5bd7df31f72a206a07ca5d0966953fed 175 ProSitePatterns PS00585 Ribosomal protein S5 signature. 37 69 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site TREPR_1494 5bd7df31f72a206a07ca5d0966953fed 175 Pfam PF00333 Ribosomal protein S5, N-terminal domain 21 83 4.7E-27 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 TREPR_1494 5bd7df31f72a206a07ca5d0966953fed 175 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 17 172 1.1E-64 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TREPR_1494 5bd7df31f72a206a07ca5d0966953fed 175 SUPERFAMILY SSF54211 88 168 5.31E-23 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_1494 5bd7df31f72a206a07ca5d0966953fed 175 Pfam PF03719 Ribosomal protein S5, C-terminal domain 96 166 1.9E-25 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 TREPR_1494 5bd7df31f72a206a07ca5d0966953fed 175 SUPERFAMILY SSF54768 18 84 4.08E-21 T 13-10-2018 TREPR_1494 5bd7df31f72a206a07ca5d0966953fed 175 Gene3D G3DSA:3.30.160.20 12 82 2.4E-29 T 13-10-2018 TREPR_1494 5bd7df31f72a206a07ca5d0966953fed 175 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 172 33.888 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TREPR_1494 5bd7df31f72a206a07ca5d0966953fed 175 Gene3D G3DSA:3.30.230.10 83 175 9.6E-33 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_2556 12b1db3beb950769a808e3ca823e6cae 345 Pfam PF02108 Flagellar assembly protein FliH 170 296 9.4E-24 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE TREPR_2556 12b1db3beb950769a808e3ca823e6cae 345 SUPERFAMILY SSF160527 205 301 8.76E-5 T 13-10-2018 TREPR_0624 efc198066e52b3c8c0583566cced29c8 279 Pfam PF14267 Domain of unknown function (DUF4357) 222 275 9.4E-21 T 13-10-2018 IPR025579 Domain of unknown function DUF4357 TREPR_0674 27a1037d3f3a2a5c93d3a24ecc5fc839 343 SUPERFAMILY SSF52540 17 267 1.03E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0674 27a1037d3f3a2a5c93d3a24ecc5fc839 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 246 332 7.8E-27 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0674 27a1037d3f3a2a5c93d3a24ecc5fc839 343 Pfam PF00005 ABC transporter 38 196 5.8E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0674 27a1037d3f3a2a5c93d3a24ecc5fc839 343 Gene3D G3DSA:3.40.50.300 15 339 6.9E-96 T 13-10-2018 TREPR_0674 27a1037d3f3a2a5c93d3a24ecc5fc839 343 SMART SM00382 46 254 3.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0674 27a1037d3f3a2a5c93d3a24ecc5fc839 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 313 6.9E-19 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0674 27a1037d3f3a2a5c93d3a24ecc5fc839 343 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2501 f5b64274c7963d706d596c7f2e53bf89 326 Pfam PF14238 Domain of unknown function (DUF4340) 79 253 8.0E-10 T 13-10-2018 IPR025641 Domain of unknown function DUF4340 TREPR_0689 432aa3ac97558ca8963138a4765408ae 194 Gene3D G3DSA:3.30.565.10 21 123 6.1E-9 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0689 432aa3ac97558ca8963138a4765408ae 194 SUPERFAMILY SSF55874 49 105 3.67E-9 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0689 432aa3ac97558ca8963138a4765408ae 194 Pfam PF13581 Histidine kinase-like ATPase domain 53 107 7.6E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0934 3571426d1ebdf682f29aacb2d66b97b3 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 1.5E-41 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0934 3571426d1ebdf682f29aacb2d66b97b3 315 SUPERFAMILY SSF161098 94 287 9.29E-22 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0934 3571426d1ebdf682f29aacb2d66b97b3 315 Gene3D G3DSA:1.10.3720.10 79 307 4.0E-26 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SUPERFAMILY SSF48452 184 350 3.04E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 Pfam PF13414 TPR repeat 486 527 3.2E-8 T 13-10-2018 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 Pfam PF13432 Tetratricopeptide repeat 280 334 1.4E-4 T 13-10-2018 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 Pfam PF13432 Tetratricopeptide repeat 347 410 2.9E-12 T 13-10-2018 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SUPERFAMILY SSF48452 306 481 6.64E-32 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 Gene3D G3DSA:1.25.40.10 413 512 5.3E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 Gene3D G3DSA:1.25.40.10 178 314 3.0E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 Gene3D G3DSA:1.25.40.10 315 412 1.8E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 Pfam PF14559 Tetratricopeptide repeat 591 647 1.0E-5 T 13-10-2018 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SUPERFAMILY SSF48452 476 648 2.91E-34 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 Gene3D G3DSA:1.25.40.10 513 649 1.7E-28 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 581 614 1.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 191 224 22.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 343 376 1.5E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 547 580 8.2E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 275 308 0.13 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 513 546 31.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 309 342 0.18 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 479 512 1.8E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 40 73 450.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 411 444 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 377 410 0.0046 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 445 478 33.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 SMART SM00028 615 648 23.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2623 fd327c3b7cd3f5ce9c750b0ce518d806 661 Pfam PF13176 Tetratricopeptide repeat 551 580 0.0011 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0668 6887a7b9a105435e88d6632edded5473 512 Gene3D G3DSA:3.30.420.40 9 307 2.7E-52 T 13-10-2018 TREPR_0668 6887a7b9a105435e88d6632edded5473 512 Pfam PF02541 Ppx/GppA phosphatase family 28 311 4.0E-30 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 TREPR_0668 6887a7b9a105435e88d6632edded5473 512 SUPERFAMILY SSF53067 8 128 2.5E-24 T 13-10-2018 TREPR_0668 6887a7b9a105435e88d6632edded5473 512 Pfam PF01966 HD domain 343 459 3.6E-9 T 13-10-2018 IPR006674 HD domain TREPR_0668 6887a7b9a105435e88d6632edded5473 512 Gene3D G3DSA:1.10.3210.10 326 512 3.1E-47 T 13-10-2018 TREPR_0668 6887a7b9a105435e88d6632edded5473 512 SUPERFAMILY SSF53067 142 312 3.49E-18 T 13-10-2018 TREPR_0668 6887a7b9a105435e88d6632edded5473 512 SUPERFAMILY SSF109604 328 511 2.88E-42 T 13-10-2018 TREPR_0668 6887a7b9a105435e88d6632edded5473 512 Gene3D G3DSA:3.30.420.150 115 300 2.7E-52 T 13-10-2018 TREPR_1173 9fba75e31029f45a026fb0afa7bd861f 568 Gene3D G3DSA:3.30.300.30 459 568 4.8E-6 T 13-10-2018 TREPR_1173 9fba75e31029f45a026fb0afa7bd861f 568 SUPERFAMILY SSF56801 13 567 1.31E-115 T 13-10-2018 TREPR_1173 9fba75e31029f45a026fb0afa7bd861f 568 Gene3D G3DSA:3.40.50.12780 17 309 1.5E-57 T 13-10-2018 TREPR_1173 9fba75e31029f45a026fb0afa7bd861f 568 Pfam PF00501 AMP-binding enzyme 30 462 3.1E-96 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TREPR_1173 9fba75e31029f45a026fb0afa7bd861f 568 Gene3D G3DSA:3.40.50.12780 320 458 4.9E-44 T 13-10-2018 TREPR_3216 1bda056dbb39c2840a487b225664c20c 468 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 134 454 3.5E-81 T 13-10-2018 IPR002822 Nickel insertion protein TREPR_3216 1bda056dbb39c2840a487b225664c20c 468 Gene3D G3DSA:3.30.70.1380 318 407 2.9E-16 T 13-10-2018 TREPR_3216 1bda056dbb39c2840a487b225664c20c 468 Hamap MF_01074 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein [larC]. 1 467 36.912 T 13-10-2018 IPR002822 Nickel insertion protein TREPR_3216 1bda056dbb39c2840a487b225664c20c 468 Pfam PF01969 Protein of unknown function DUF111 4 456 9.8E-136 T 13-10-2018 IPR002822 Nickel insertion protein TREPR_1836 3ca41c11f9c0e55d7de9890dc8436a89 332 SUPERFAMILY SSF64182 13 313 3.14E-55 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily TREPR_1836 3ca41c11f9c0e55d7de9890dc8436a89 332 Gene3D G3DSA:3.10.310.30 201 325 3.4E-31 T 13-10-2018 TREPR_1836 3ca41c11f9c0e55d7de9890dc8436a89 332 Pfam PF02272 DHHA1 domain 252 320 2.2E-11 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TREPR_1836 3ca41c11f9c0e55d7de9890dc8436a89 332 Pfam PF01368 DHH family 15 158 2.2E-12 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_1836 3ca41c11f9c0e55d7de9890dc8436a89 332 Gene3D G3DSA:3.90.1640.10 1 199 4.3E-47 T 13-10-2018 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SMART SM00091 143 211 0.034 T 13-10-2018 IPR000014 PAS domain TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SMART SM00091 16 83 0.1 T 13-10-2018 IPR000014 PAS domain TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SMART SM00448 539 654 3.7E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SMART SM00388 291 356 1.5E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SUPERFAMILY SSF55785 12 134 8.03E-13 T 13-10-2018 IPR035965 PAS domain superfamily TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SUPERFAMILY SSF47226 637 783 5.89E-21 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Pfam PF08448 PAS fold 22 136 1.2E-11 T 13-10-2018 IPR013656 PAS fold-4 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SMART SM00387 403 518 9.1E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Pfam PF01627 Hpt domain 706 773 3.7E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Pfam PF00072 Response regulator receiver domain 541 654 2.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Gene3D G3DSA:3.30.450.20 4 141 9.7E-17 T 13-10-2018 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Gene3D G3DSA:3.40.50.2300 529 659 4.4E-39 T 13-10-2018 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Gene3D G3DSA:1.10.287.130 258 354 2.6E-26 T 13-10-2018 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SUPERFAMILY SSF47384 278 358 4.12E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 354 4.4E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Pfam PF13426 PAS domain 162 253 4.2E-5 T 13-10-2018 IPR000014 PAS domain TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Gene3D G3DSA:3.30.565.10 355 518 7.4E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Gene3D G3DSA:1.20.120.160 684 796 3.8E-21 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 516 5.7E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SUPERFAMILY SSF55874 345 520 1.96E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SUPERFAMILY SSF55785 139 257 8.38E-12 T 13-10-2018 IPR035965 PAS domain superfamily TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 SUPERFAMILY SSF52172 538 659 2.28E-35 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 Gene3D G3DSA:3.30.450.20 142 257 2.2E-11 T 13-10-2018 TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 266 5.1E-6 T 13-10-2018 IPR000014 PAS domain TREPR_0616 fcb50e5dead76fb089c347afbd9f6ac0 902 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 141 4.4E-9 T 13-10-2018 IPR000014 PAS domain TREPR_3374 6f7d001ac34b71fe5fead84f86737ed3 389 SUPERFAMILY SSF51735 8 173 7.57E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3374 6f7d001ac34b71fe5fead84f86737ed3 389 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 7.4E-26 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TREPR_3374 6f7d001ac34b71fe5fead84f86737ed3 389 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 156 277 1.3E-4 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 TREPR_3374 6f7d001ac34b71fe5fead84f86737ed3 389 Gene3D G3DSA:3.40.50.720 17 362 9.7E-121 T 13-10-2018 TREPR_3374 6f7d001ac34b71fe5fead84f86737ed3 389 Gene3D G3DSA:3.30.360.10 147 387 9.7E-121 T 13-10-2018 TREPR_3374 6f7d001ac34b71fe5fead84f86737ed3 389 SUPERFAMILY SSF55347 150 327 2.62E-25 T 13-10-2018 TREPR_3794 5f951f4239039fdc77a4aab40fa8b118 243 Gene3D G3DSA:3.40.50.150 13 243 8.4E-51 T 13-10-2018 TREPR_3794 5f951f4239039fdc77a4aab40fa8b118 243 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 22 238 21.638 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TREPR_3794 5f951f4239039fdc77a4aab40fa8b118 243 Pfam PF02527 rRNA small subunit methyltransferase G 28 80 8.7E-6 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TREPR_3794 5f951f4239039fdc77a4aab40fa8b118 243 Pfam PF02527 rRNA small subunit methyltransferase G 103 211 8.0E-28 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TREPR_3794 5f951f4239039fdc77a4aab40fa8b118 243 PIRSF PIRSF003078 5 243 4.3E-42 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TREPR_3794 5f951f4239039fdc77a4aab40fa8b118 243 SUPERFAMILY SSF53335 24 241 4.6E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2311 b36e0fb40cd7756b5e09e3672cf7c2ea 171 Gene3D G3DSA:1.10.10.10 76 166 9.7E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2311 b36e0fb40cd7756b5e09e3672cf7c2ea 171 SUPERFAMILY SSF46767 76 163 5.62E-26 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 TREPR_2311 b36e0fb40cd7756b5e09e3672cf7c2ea 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 77 161 1.3E-30 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TREPR_2311 b36e0fb40cd7756b5e09e3672cf7c2ea 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 162 37.849 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 TREPR_2311 b36e0fb40cd7756b5e09e3672cf7c2ea 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 132 138 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TREPR_2311 b36e0fb40cd7756b5e09e3672cf7c2ea 171 Gene3D G3DSA:3.30.160.70 1 72 7.1E-14 T 13-10-2018 TREPR_2311 b36e0fb40cd7756b5e09e3672cf7c2ea 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 163 4.3E-29 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TREPR_2311 b36e0fb40cd7756b5e09e3672cf7c2ea 171 SUPERFAMILY SSF53155 5 81 1.53E-15 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TREPR_1847 2704d393f4f02d140ce5bdf2ded3874b 660 SUPERFAMILY SSF50249 407 549 7.62E-9 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1847 2704d393f4f02d140ce5bdf2ded3874b 660 Gene3D G3DSA:3.30.470.30 218 407 1.1E-8 T 13-10-2018 TREPR_1847 2704d393f4f02d140ce5bdf2ded3874b 660 SUPERFAMILY SSF56091 221 405 6.04E-11 T 13-10-2018 TREPR_1847 2704d393f4f02d140ce5bdf2ded3874b 660 Gene3D G3DSA:2.40.50.140 408 550 2.6E-14 T 13-10-2018 TREPR_3067 fee75fd7dda0652d28034ecfc4e942dc 714 Gene3D G3DSA:1.10.8.190 1 105 5.7E-21 T 13-10-2018 TREPR_3067 fee75fd7dda0652d28034ecfc4e942dc 714 Gene3D G3DSA:3.40.970.20 480 569 1.8E-36 T 13-10-2018 TREPR_3067 fee75fd7dda0652d28034ecfc4e942dc 714 TIGRFAM TIGR00316 cdhC: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit 303 709 3.5E-125 T 13-10-2018 IPR004461 CO dehydrogenase/acetyl-CoA synthase complex beta subunit GO:0006084|GO:0018492 KEGG: 00720+2.3.1.169|MetaCyc: PWY-7784 TREPR_3067 fee75fd7dda0652d28034ecfc4e942dc 714 SUPERFAMILY SSF56821 2 713 3.3E-210 T 13-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 TREPR_3067 fee75fd7dda0652d28034ecfc4e942dc 714 Pfam PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit 305 458 8.6E-67 T 13-10-2018 IPR004461 CO dehydrogenase/acetyl-CoA synthase complex beta subunit GO:0006084|GO:0018492 KEGG: 00720+2.3.1.169|MetaCyc: PWY-7784 TREPR_3067 fee75fd7dda0652d28034ecfc4e942dc 714 Gene3D G3DSA:3.40.50.2030 111 296 2.1E-52 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3067 fee75fd7dda0652d28034ecfc4e942dc 714 Gene3D G3DSA:3.30.1650.10 303 479 2.6E-67 T 13-10-2018 IPR038571 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase, domain 3 superfamily KEGG: 00720+2.3.1.169|MetaCyc: PWY-7784 TREPR_3067 fee75fd7dda0652d28034ecfc4e942dc 714 Gene3D G3DSA:3.40.1470.10 585 714 2.4E-50 T 13-10-2018 TREPR_2235 6cad621be277add27a685aaae4b99934 99 SMART SM01152 8 84 2.7E-27 T 13-10-2018 IPR003746 Protein of unknown function DUF167 TREPR_2235 6cad621be277add27a685aaae4b99934 99 SUPERFAMILY SSF69786 4 82 4.05E-23 T 13-10-2018 IPR036591 YggU-like superfamily TREPR_2235 6cad621be277add27a685aaae4b99934 99 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 18.017 T 13-10-2018 IPR003746 Protein of unknown function DUF167 TREPR_2235 6cad621be277add27a685aaae4b99934 99 Gene3D G3DSA:3.30.1200.10 1 99 1.3E-25 T 13-10-2018 IPR036591 YggU-like superfamily TREPR_2235 6cad621be277add27a685aaae4b99934 99 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 79 7.6E-23 T 13-10-2018 IPR003746 Protein of unknown function DUF167 TREPR_2176 185fd22fd9b3f09be11375cfc957ee11 409 ProSitePatterns PS01007 Transposases, Mutator family, signature. 240 264 - T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_2176 185fd22fd9b3f09be11375cfc957ee11 409 Pfam PF00872 Transposase, Mutator family 23 385 3.9E-114 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_0820 fdf537fdaffee7900780f0a1b33b58d6 371 Pfam PF01420 Type I restriction modification DNA specificity domain 176 357 3.9E-18 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TREPR_0820 fdf537fdaffee7900780f0a1b33b58d6 371 Pfam PF01420 Type I restriction modification DNA specificity domain 1 157 2.6E-22 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TREPR_0820 fdf537fdaffee7900780f0a1b33b58d6 371 Gene3D G3DSA:3.90.220.20 149 353 7.3E-32 T 13-10-2018 TREPR_0820 fdf537fdaffee7900780f0a1b33b58d6 371 SUPERFAMILY SSF116734 159 370 1.8E-33 T 13-10-2018 TREPR_0820 fdf537fdaffee7900780f0a1b33b58d6 371 Gene3D G3DSA:3.90.220.20 1 128 8.3E-20 T 13-10-2018 TREPR_0820 fdf537fdaffee7900780f0a1b33b58d6 371 SUPERFAMILY SSF116734 3 174 5.89E-30 T 13-10-2018 TREPR_0270 af49b7ac3f7bfec32ecf24aee03b9bfd 286 Gene3D G3DSA:3.40.1280.10 13 284 1.4E-22 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TREPR_0270 af49b7ac3f7bfec32ecf24aee03b9bfd 286 SUPERFAMILY SSF75217 79 279 7.52E-24 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases TREPR_0270 af49b7ac3f7bfec32ecf24aee03b9bfd 286 Pfam PF04452 RNA methyltransferase 19 277 9.7E-33 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TREPR_0270 af49b7ac3f7bfec32ecf24aee03b9bfd 286 PIRSF PIRSF015601 2 284 4.6E-33 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TREPR_0270 af49b7ac3f7bfec32ecf24aee03b9bfd 286 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 223 282 6.6E-15 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TREPR_1036 f94199f99204031f73171c82f7b08547 872 SUPERFAMILY SSF82866 666 866 3.79E-32 T 13-10-2018 TREPR_1036 f94199f99204031f73171c82f7b08547 872 Pfam PF03176 MMPL family 654 862 9.7E-18 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TREPR_1036 f94199f99204031f73171c82f7b08547 872 Pfam PF03176 MMPL family 144 384 5.3E-28 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TREPR_1036 f94199f99204031f73171c82f7b08547 872 Gene3D G3DSA:1.20.1640.10 673 868 9.4E-11 T 13-10-2018 TREPR_1036 f94199f99204031f73171c82f7b08547 872 Gene3D G3DSA:1.20.1640.10 172 388 2.7E-17 T 13-10-2018 TREPR_1036 f94199f99204031f73171c82f7b08547 872 SUPERFAMILY SSF82866 159 375 4.97E-29 T 13-10-2018 TREPR_0682 ddc6eca7f3423c3e70c4d68149cd45bc 322 Gene3D G3DSA:1.20.272.10 194 319 1.3E-14 T 13-10-2018 TREPR_0682 ddc6eca7f3423c3e70c4d68149cd45bc 322 Gene3D G3DSA:3.40.50.300 3 121 8.8E-13 T 13-10-2018 TREPR_0682 ddc6eca7f3423c3e70c4d68149cd45bc 322 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 6 268 2.8E-33 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 TREPR_0682 ddc6eca7f3423c3e70c4d68149cd45bc 322 Pfam PF06144 DNA polymerase III, delta subunit 46 173 5.7E-10 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 TREPR_0682 ddc6eca7f3423c3e70c4d68149cd45bc 322 SUPERFAMILY SSF48019 198 315 1.36E-6 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TREPR_0682 ddc6eca7f3423c3e70c4d68149cd45bc 322 SUPERFAMILY SSF52540 5 191 8.63E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0682 ddc6eca7f3423c3e70c4d68149cd45bc 322 Gene3D G3DSA:1.10.8.60 123 189 3.5E-7 T 13-10-2018 TREPR_2390 9020c5e28b55af348c73f26e3de9f144 339 SUPERFAMILY SSF53756 107 290 3.77E-22 T 13-10-2018 TREPR_2390 9020c5e28b55af348c73f26e3de9f144 339 Gene3D G3DSA:3.40.50.11660 160 326 3.5E-21 T 13-10-2018 IPR038577 GT10-like superfamily TREPR_2390 9020c5e28b55af348c73f26e3de9f144 339 Pfam PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term 204 289 1.2E-8 T 13-10-2018 IPR001503 Glycosyl transferase family 10 GO:0006486|GO:0008417|GO:0016020 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 Pfam PF00203 Ribosomal protein S19 3 83 1.6E-32 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.444 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 Gene3D G3DSA:3.30.860.10 1 92 7.5E-35 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 SUPERFAMILY SSF54570 2 84 3.27E-32 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 PIRSF PIRSF002144 1 93 5.4E-30 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.2E-21 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.2E-21 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.2E-21 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 2.3E-44 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 TREPR_1481 e684e220cd4d7b1048e63de1357fa188 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 Gene3D G3DSA:3.30.420.40 134 308 7.3E-112 T 13-10-2018 TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 Gene3D G3DSA:3.30.420.40 3 329 7.3E-112 T 13-10-2018 TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 SUPERFAMILY SSF53067 1 323 1.44E-39 T 13-10-2018 TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 328 4.6E-118 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 346 59.099 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 321 1.8E-101 T 13-10-2018 IPR017861 Kae1/TsaD family TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 Pfam PF00814 Glycoprotease family 24 321 1.2E-89 T 13-10-2018 IPR000905 Gcp-like domain TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 8.4E-36 T 13-10-2018 IPR017861 Kae1/TsaD family TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 8.4E-36 T 13-10-2018 IPR017861 Kae1/TsaD family TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 159 180 8.4E-36 T 13-10-2018 IPR017861 Kae1/TsaD family TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 281 290 8.4E-36 T 13-10-2018 IPR017861 Kae1/TsaD family TREPR_0165 fd0e75ff8ba63a7fba76bb10fb84a237 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 8.4E-36 T 13-10-2018 IPR017861 Kae1/TsaD family TREPR_3271 47fd382f0c244b9208cf5671ffc479c5 255 SUPERFAMILY SSF52540 2 218 3.07E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3271 47fd382f0c244b9208cf5671ffc479c5 255 Pfam PF00005 ABC transporter 18 164 1.4E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3271 47fd382f0c244b9208cf5671ffc479c5 255 Gene3D G3DSA:3.40.50.300 1 248 1.7E-62 T 13-10-2018 TREPR_3271 47fd382f0c244b9208cf5671ffc479c5 255 SMART SM00382 27 212 5.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3271 47fd382f0c244b9208cf5671ffc479c5 255 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2555 1b361ec235c9e21da92083af0f0eb59c 449 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 346 355 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2555 1b361ec235c9e21da92083af0f0eb59c 449 SMART SM00382 158 339 1.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2555 1b361ec235c9e21da92083af0f0eb59c 449 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 5 434 8.3E-187 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2555 1b361ec235c9e21da92083af0f0eb59c 449 Gene3D G3DSA:3.40.50.12240 13 438 1.3E-149 T 13-10-2018 TREPR_2555 1b361ec235c9e21da92083af0f0eb59c 449 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 355 7.4E-73 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2555 1b361ec235c9e21da92083af0f0eb59c 449 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 24 89 7.2E-7 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2555 1b361ec235c9e21da92083af0f0eb59c 449 SUPERFAMILY SSF52540 93 360 7.39E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2931 56213257e520b5dcf9e55f5d9d213958 607 SMART SM00382 380 573 1.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2931 56213257e520b5dcf9e55f5d9d213958 607 Gene3D G3DSA:1.20.1560.10 10 336 6.3E-81 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_2931 56213257e520b5dcf9e55f5d9d213958 607 Pfam PF00664 ABC transporter transmembrane region 33 307 1.1E-38 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TREPR_2931 56213257e520b5dcf9e55f5d9d213958 607 Pfam PF00005 ABC transporter 371 518 6.7E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2931 56213257e520b5dcf9e55f5d9d213958 607 SUPERFAMILY SSF52540 351 597 1.15E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2931 56213257e520b5dcf9e55f5d9d213958 607 Gene3D G3DSA:3.40.50.300 351 604 1.6E-77 T 13-10-2018 TREPR_2931 56213257e520b5dcf9e55f5d9d213958 607 SUPERFAMILY SSF90123 19 339 1.57E-73 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_0307 f27bdf708efbb872a1cf4089007c4696 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 186 7.7E-64 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TREPR_0307 f27bdf708efbb872a1cf4089007c4696 202 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 197 25.773 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 TREPR_0307 f27bdf708efbb872a1cf4089007c4696 202 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 192 2.4E-68 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 TREPR_0307 f27bdf708efbb872a1cf4089007c4696 202 PIRSF PIRSF006102 1 202 3.7E-72 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TREPR_0538 7bc291c2b4356e9e271b2c0e07c196b3 300 Gene3D G3DSA:3.40.50.1980 163 295 3.5E-33 T 13-10-2018 TREPR_0538 7bc291c2b4356e9e271b2c0e07c196b3 300 Gene3D G3DSA:3.40.50.1980 27 161 1.1E-21 T 13-10-2018 TREPR_0538 7bc291c2b4356e9e271b2c0e07c196b3 300 SUPERFAMILY SSF53807 26 298 1.18E-48 T 13-10-2018 TREPR_0538 7bc291c2b4356e9e271b2c0e07c196b3 300 Pfam PF01497 Periplasmic binding protein 42 270 4.5E-29 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 SUPERFAMILY SSF56281 174 367 3.52E-23 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 Pfam PF12733 Cadherin-like beta sandwich domain 457 536 1.3E-8 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 Pfam PF12733 Cadherin-like beta sandwich domain 81 161 2.1E-10 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 Pfam PF12733 Cadherin-like beta sandwich domain 585 665 4.4E-7 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 Pfam PF00753 Metallo-beta-lactamase superfamily 698 760 3.9E-7 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 Pfam PF00753 Metallo-beta-lactamase superfamily 193 344 3.0E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 SUPERFAMILY SSF53474 1062 1552 4.7E-96 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 Gene3D G3DSA:3.60.15.10 672 882 9.1E-22 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 1250 1265 - T 13-10-2018 IPR019826 Carboxylesterase type B, active site TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 SUPERFAMILY SSF56281 670 935 3.11E-20 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 Gene3D G3DSA:3.40.50.1820 1059 1573 4.0E-116 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 Pfam PF00135 Carboxylesterase family 1060 1552 3.0E-94 T 13-10-2018 IPR002018 Carboxylesterase, type B TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 Gene3D G3DSA:3.60.15.10 157 373 1.8E-24 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 SMART SM00849 695 872 6.8E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_1587 1a6f0809cb52dcbc2717b999280f6565 1590 SMART SM00849 191 367 7.6E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2861 8e55d2df39ac26b6524360f6ceed6cd1 260 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site TREPR_2861 8e55d2df39ac26b6524360f6ceed6cd1 260 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 219 6.6E-25 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00149 Fumarate lyase superfamily signature 112 130 5.5E-29 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00149 Fumarate lyase superfamily signature 285 301 5.5E-29 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00149 Fumarate lyase superfamily signature 241 268 5.5E-29 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00149 Fumarate lyase superfamily signature 157 175 5.5E-29 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 ProSitePatterns PS00163 Fumarate lyases signature. 285 294 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 Pfam PF00206 Lyase 28 310 1.2E-66 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00145 Argininosuccinate lyase family signature 203 219 6.6E-63 T 13-10-2018 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00145 Argininosuccinate lyase family signature 285 301 6.6E-63 T 13-10-2018 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00145 Argininosuccinate lyase family signature 111 133 6.6E-63 T 13-10-2018 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00145 Argininosuccinate lyase family signature 241 265 6.6E-63 T 13-10-2018 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00145 Argininosuccinate lyase family signature 320 339 6.6E-63 T 13-10-2018 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 PRINTS PR00145 Argininosuccinate lyase family signature 152 172 6.6E-63 T 13-10-2018 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 Gene3D G3DSA:1.10.40.30 370 443 2.8E-176 T 13-10-2018 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 Gene3D G3DSA:1.10.275.10 35 239 2.8E-176 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 Gene3D G3DSA:1.20.200.10 129 459 2.8E-176 T 13-10-2018 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 TIGRFAM TIGR00838 argH: argininosuccinate lyase 13 465 1.9E-171 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 Hamap MF_00006 Argininosuccinate lyase [argH]. 12 464 40.955 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 SUPERFAMILY SSF48557 16 466 3.46E-136 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 TREPR_3357 705e8cf28f187b32e6371965abe27cf1 468 Pfam PF14698 Argininosuccinate lyase C-terminal 373 442 4.4E-20 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TREPR_0661 4790bf20f594d7c27e3afb67ef233371 238 Pfam PF04909 Amidohydrolase 41 230 3.2E-28 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TREPR_0661 4790bf20f594d7c27e3afb67ef233371 238 SUPERFAMILY SSF51556 3 237 9.6E-45 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_0661 4790bf20f594d7c27e3afb67ef233371 238 Gene3D G3DSA:3.20.20.140 2 238 2.3E-51 T 13-10-2018 TREPR_3773 bf0320350a4b189a537067f2f946732a 450 Pfam PF00696 Amino acid kinase family 44 216 1.9E-8 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TREPR_3773 bf0320350a4b189a537067f2f946732a 450 Gene3D G3DSA:3.40.1160.10 9 302 1.5E-64 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_3773 bf0320350a4b189a537067f2f946732a 450 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 11 449 2.8E-90 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 TREPR_3773 bf0320350a4b189a537067f2f946732a 450 Pfam PF00583 Acetyltransferase (GNAT) family 348 410 5.0E-6 T 13-10-2018 IPR000182 GNAT domain TREPR_3773 bf0320350a4b189a537067f2f946732a 450 SUPERFAMILY SSF53633 6 304 4.49E-39 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_3773 bf0320350a4b189a537067f2f946732a 450 Gene3D G3DSA:3.40.630.30 303 450 3.1E-35 T 13-10-2018 TREPR_3773 bf0320350a4b189a537067f2f946732a 450 PIRSF PIRSF000423 1 450 1.5E-103 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 TREPR_3773 bf0320350a4b189a537067f2f946732a 450 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 450 97.747 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 TREPR_3773 bf0320350a4b189a537067f2f946732a 450 SUPERFAMILY SSF55729 307 428 1.63E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_0594 b886c2abc16ec53535f8992ca02bbaf8 336 Gene3D G3DSA:3.40.190.170 36 328 8.7E-57 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TREPR_0594 b886c2abc16ec53535f8992ca02bbaf8 336 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 63 317 1.1E-41 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TREPR_0801 9cfec56c1b31f4265497c7a1e54312eb 244 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 9.8E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_0801 9cfec56c1b31f4265497c7a1e54312eb 244 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 26 37 9.8E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_0801 9cfec56c1b31f4265497c7a1e54312eb 244 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 136 9.8E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_0801 9cfec56c1b31f4265497c7a1e54312eb 244 SUPERFAMILY SSF56784 20 239 1.53E-52 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_0801 9cfec56c1b31f4265497c7a1e54312eb 244 Gene3D G3DSA:3.40.50.1000 29 231 5.1E-53 T 13-10-2018 IPR023214 HAD superfamily TREPR_0801 9cfec56c1b31f4265497c7a1e54312eb 244 Pfam PF13419 Haloacid dehalogenase-like hydrolase 29 210 3.0E-32 T 13-10-2018 TREPR_0801 9cfec56c1b31f4265497c7a1e54312eb 244 Gene3D G3DSA:1.10.150.240 41 109 5.1E-53 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 296 314 4.7E-11 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 4.7E-11 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 71 88 4.7E-11 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 155 164 4.7E-11 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 SUPERFAMILY SSF50621 256 409 2.09E-40 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 1.9E-8 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 53 71 1.9E-8 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 73 85 1.9E-8 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 Gene3D G3DSA:2.40.37.10 11 409 1.5E-100 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 SUPERFAMILY SSF51419 21 279 2.29E-53 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 Gene3D G3DSA:3.20.20.10 29 274 1.5E-100 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 53 71 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 24 368 1.1E-18 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TREPR_1186 289af38c5f4a8bab3cb08b556356e393 423 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 278 1.4E-20 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TREPR_2416 2b16b959dfdad108c89c25039c98556a 282 Pfam PF11738 Protein of unknown function (DUF3298) 190 263 7.9E-12 T 13-10-2018 IPR021729 Domain of unknown function DUF3298 TREPR_2416 2b16b959dfdad108c89c25039c98556a 282 Gene3D G3DSA:3.90.640.20 183 276 7.0E-18 T 13-10-2018 IPR037126 PdaC/RsiV-like superfamily TREPR_2416 2b16b959dfdad108c89c25039c98556a 282 Gene3D G3DSA:3.30.565.40 61 182 2.9E-13 T 13-10-2018 TREPR_1039 5c5f21bd46c1f25841937899c9b91911 77 Gene3D G3DSA:1.10.10.10 1 76 8.9E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1039 5c5f21bd46c1f25841937899c9b91911 77 SUPERFAMILY SSF46785 1 70 7.35E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 Gene3D G3DSA:1.10.10.60 254 310 9.4E-14 T 13-10-2018 TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 Pfam PF07883 Cupin domain 39 91 5.6E-10 T 13-10-2018 IPR013096 Cupin 2, conserved barrel TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 287 4.4E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 303 4.4E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 Gene3D G3DSA:2.60.120.10 7 102 6.8E-12 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 SUPERFAMILY SSF46689 256 307 6.72E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 Pfam PF12833 Helix-turn-helix domain 227 304 2.3E-14 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 SMART SM00342 220 303 4.9E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 SUPERFAMILY SSF51215 35 128 8.11E-13 T 13-10-2018 IPR037923 Transcription regulator HTH-like TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 257 299 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TREPR_0565 9b0afbd5edea154ddbba845e4777b325 317 Gene3D G3DSA:1.10.10.60 206 253 3.5E-8 T 13-10-2018 TREPR_0903 64d384e7d6b300deca7b32a310c549df 405 Gene3D G3DSA:3.30.70.270 9 168 6.9E-24 T 13-10-2018 TREPR_0903 64d384e7d6b300deca7b32a310c549df 405 Pfam PF00817 impB/mucB/samB family 16 157 1.3E-19 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TREPR_0903 64d384e7d6b300deca7b32a310c549df 405 SUPERFAMILY SSF56672 7 238 3.0E-41 T 13-10-2018 TREPR_0903 64d384e7d6b300deca7b32a310c549df 405 Gene3D G3DSA:2.30.40.20 25 77 6.9E-24 T 13-10-2018 TREPR_0903 64d384e7d6b300deca7b32a310c549df 405 Gene3D G3DSA:1.10.150.20 183 233 9.1E-7 T 13-10-2018 TREPR_3593 13e4c2c4762041b4643457e48279e2be 176 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 72 1.0E-9 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TREPR_3593 13e4c2c4762041b4643457e48279e2be 176 Gene3D G3DSA:2.40.10.330 70 121 1.7E-55 T 13-10-2018 TREPR_3593 13e4c2c4762041b4643457e48279e2be 176 SUPERFAMILY SSF54534 3 140 4.32E-32 T 13-10-2018 TREPR_3593 13e4c2c4762041b4643457e48279e2be 176 Gene3D G3DSA:3.10.50.40 3 153 1.7E-55 T 13-10-2018 TREPR_3116 15c47c4d43afcb33c2db1601e68d7862 887 Gene3D G3DSA:3.40.50.300 84 373 9.9E-13 T 13-10-2018 TREPR_3116 15c47c4d43afcb33c2db1601e68d7862 887 Gene3D G3DSA:3.40.50.300 461 728 4.7E-16 T 13-10-2018 TREPR_3116 15c47c4d43afcb33c2db1601e68d7862 887 SUPERFAMILY SSF52540 84 729 2.57E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2509 f73ec0a8371373b9be63880aa9a4d36e 285 Gene3D G3DSA:1.10.3720.10 10 276 1.1E-64 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2509 f73ec0a8371373b9be63880aa9a4d36e 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 278 2.9E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2509 f73ec0a8371373b9be63880aa9a4d36e 285 SUPERFAMILY SSF161098 14 284 4.77E-70 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1018 32fccdc6cc6266404ac113ec1f218402 482 Gene3D G3DSA:2.40.160.60 182 482 1.5E-15 T 13-10-2018 TREPR_1018 32fccdc6cc6266404ac113ec1f218402 482 SUPERFAMILY SSF56935 44 482 6.23E-18 T 13-10-2018 TREPR_1018 32fccdc6cc6266404ac113ec1f218402 482 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 253 436 1.7E-8 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) TREPR_2456 035079b4e14479a60e76acf29bfe26f2 353 Gene3D G3DSA:1.10.3210.10 144 353 1.5E-59 T 13-10-2018 TREPR_2456 035079b4e14479a60e76acf29bfe26f2 353 SMART SM00448 9 120 7.9E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2456 035079b4e14479a60e76acf29bfe26f2 353 Pfam PF13487 HD domain 226 293 5.7E-17 T 13-10-2018 TREPR_2456 035079b4e14479a60e76acf29bfe26f2 353 Pfam PF00072 Response regulator receiver domain 11 114 1.8E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2456 035079b4e14479a60e76acf29bfe26f2 353 SUPERFAMILY SSF52172 9 139 5.69E-30 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2456 035079b4e14479a60e76acf29bfe26f2 353 SUPERFAMILY SSF109604 153 341 8.48E-28 T 13-10-2018 TREPR_2456 035079b4e14479a60e76acf29bfe26f2 353 Gene3D G3DSA:3.40.50.2300 3 143 2.9E-30 T 13-10-2018 TREPR_3601 b6f87f13d8aa415667ccdc58b642b7b0 306 SUPERFAMILY SSF52151 6 212 3.66E-52 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TREPR_3601 b6f87f13d8aa415667ccdc58b642b7b0 306 Pfam PF01734 Patatin-like phospholipase 11 191 1.5E-27 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TREPR_3601 b6f87f13d8aa415667ccdc58b642b7b0 306 Gene3D G3DSA:3.40.1090.10 105 235 4.0E-17 T 13-10-2018 TREPR_3601 b6f87f13d8aa415667ccdc58b642b7b0 306 Gene3D G3DSA:3.40.1090.10 2 104 2.7E-25 T 13-10-2018 TREPR_0977 6f0a464ad006e592d2245e06666e3549 553 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 551 46.616 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_0977 6f0a464ad006e592d2245e06666e3549 553 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_0977 6f0a464ad006e592d2245e06666e3549 553 SUPERFAMILY SSF52016 371 550 4.63E-62 T 13-10-2018 TREPR_0977 6f0a464ad006e592d2245e06666e3549 553 Pfam PF00920 Dehydratase family 31 548 3.8E-223 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_0977 6f0a464ad006e592d2245e06666e3549 553 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 459 470 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_0977 6f0a464ad006e592d2245e06666e3549 553 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 551 2.0E-232 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_0977 6f0a464ad006e592d2245e06666e3549 553 SUPERFAMILY SSF143975 2 370 8.11E-136 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_0977 6f0a464ad006e592d2245e06666e3549 553 Gene3D G3DSA:3.50.30.80 371 522 1.3E-55 T 13-10-2018 TREPR_2825 3fadb1ff3deac880e08c50a770bdabf1 184 SUPERFAMILY SSF46689 7 72 8.48E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_2825 3fadb1ff3deac880e08c50a770bdabf1 184 Gene3D G3DSA:1.10.357.10 3 183 8.4E-37 T 13-10-2018 TREPR_2825 3fadb1ff3deac880e08c50a770bdabf1 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.0E-4 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_2825 3fadb1ff3deac880e08c50a770bdabf1 184 Pfam PF14278 Transcriptional regulator C-terminal region 90 163 4.3E-15 T 13-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type TREPR_1924 fbdff8bc994de55749dfbcb106195cc1 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 170 5.1E-40 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 TREPR_1924 fbdff8bc994de55749dfbcb106195cc1 231 Pfam PF00814 Glycoprotease family 33 151 5.1E-19 T 13-10-2018 IPR000905 Gcp-like domain TREPR_1924 fbdff8bc994de55749dfbcb106195cc1 231 SUPERFAMILY SSF53067 1 100 9.06E-24 T 13-10-2018 TREPR_1924 fbdff8bc994de55749dfbcb106195cc1 231 Gene3D G3DSA:3.30.420.40 3 221 2.1E-39 T 13-10-2018 TREPR_1924 fbdff8bc994de55749dfbcb106195cc1 231 Gene3D G3DSA:3.30.420.40 94 190 2.1E-39 T 13-10-2018 TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 SUPERFAMILY SSF46894 138 198 2.65E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 Pfam PF00072 Response regulator receiver domain 5 119 4.7E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 7.1E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 7.1E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 7.1E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 SMART SM00448 2 120 7.9E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 SUPERFAMILY SSF52172 3 133 1.57E-21 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 198 2.6E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 Gene3D G3DSA:3.40.50.12740 3 201 1.3E-41 T 13-10-2018 TREPR_1860 7016ae93e38663c7ee7e2a84fabfa84d 201 SMART SM00421 145 201 8.1E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1197 192c2a91912533f082bbf8262c2622b7 105 Gene3D G3DSA:2.30.30.110 1 105 4.0E-32 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TREPR_1197 192c2a91912533f082bbf8262c2622b7 105 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 103 2.7E-29 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TREPR_1197 192c2a91912533f082bbf8262c2622b7 105 SUPERFAMILY SSF50118 1 103 9.65E-34 T 13-10-2018 TREPR_1197 192c2a91912533f082bbf8262c2622b7 105 PIRSF PIRSF033490 1 104 7.2E-25 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TREPR_1967 01ed0fd8759b147e4927a44a60bac7d0 207 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 195 29.738 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TREPR_1967 01ed0fd8759b147e4927a44a60bac7d0 207 Pfam PF01195 Peptidyl-tRNA hydrolase 4 190 1.9E-46 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TREPR_1967 01ed0fd8759b147e4927a44a60bac7d0 207 Gene3D G3DSA:3.40.50.1470 1 206 2.3E-51 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TREPR_1967 01ed0fd8759b147e4927a44a60bac7d0 207 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 125 135 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TREPR_1967 01ed0fd8759b147e4927a44a60bac7d0 207 SUPERFAMILY SSF53178 2 202 1.22E-50 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 SMART SM01383 43 119 6.3E-42 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 SMART SM01382 125 252 8.8E-91 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 Gene3D G3DSA:4.10.950.10 198 275 4.9E-35 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 47.676 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 250 2.2E-56 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 SUPERFAMILY SSF50104 128 270 1.26E-60 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily TREPR_1480 6108497df252f95c57ae64e04ca70025 276 Gene3D G3DSA:2.30.30.30 119 197 3.5E-31 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 SUPERFAMILY SSF50249 3 126 4.46E-45 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1480 6108497df252f95c57ae64e04ca70025 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 3.8E-131 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 Gene3D G3DSA:2.40.50.140 1 114 5.5E-44 T 13-10-2018 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 43 118 1.7E-31 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1480 6108497df252f95c57ae64e04ca70025 276 PIRSF PIRSF002158 3 276 2.4E-96 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_0574 1f442f6f7779085427c3d62e453f6a60 241 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 217 1.7E-32 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TREPR_0574 1f442f6f7779085427c3d62e453f6a60 241 Pfam PF02592 Putative vitamin uptake transporter 47 211 1.5E-43 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TREPR_0574 1f442f6f7779085427c3d62e453f6a60 241 Hamap MF_02088 Probable queuosine precursor transporter. 3 224 17.508 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.2E-68 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 Gene3D G3DSA:3.90.930.12 83 179 2.7E-34 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 Gene3D G3DSA:3.90.930.12 1 82 2.4E-29 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 34.92 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 Pfam PF00347 Ribosomal protein L6 91 164 1.1E-14 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 Pfam PF00347 Ribosomal protein L6 11 82 7.0E-16 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 SUPERFAMILY SSF56053 83 176 2.1E-31 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.6E-29 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.6E-29 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.6E-29 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 PIRSF PIRSF002162 1 177 4.9E-45 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1492 6861e0fde1b0e557c0fedff9cde83130 179 SUPERFAMILY SSF56053 1 82 1.03E-24 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 Gene3D G3DSA:3.30.499.20 4 282 4.6E-92 T 13-10-2018 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 ProSitePatterns PS00450 Aconitase family signature 1. 304 320 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 429 8.1E-130 T 13-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 Gene3D G3DSA:3.30.499.10 287 430 4.6E-54 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 ProSitePatterns PS01244 Aconitase family signature 2. 364 377 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 SUPERFAMILY SSF53732 1 429 2.35E-140 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 428 3.5E-150 T 13-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 PRINTS PR00415 Aconitase family signature 188 201 1.5E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 PRINTS PR00415 Aconitase family signature 126 141 1.5E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 PRINTS PR00415 Aconitase family signature 112 125 1.5E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 PRINTS PR00415 Aconitase family signature 308 319 1.5E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 PRINTS PR00415 Aconitase family signature 202 215 1.5E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 PRINTS PR00415 Aconitase family signature 101 109 1.5E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 PRINTS PR00415 Aconitase family signature 364 377 1.5E-28 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 Pfam PF00330 Aconitase family (aconitate hydratase) 7 422 1.9E-103 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_1637 119eb83c0df03d6c383be2f55b045dff 430 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 430 42.471 T 13-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 Pfam PF00288 GHMP kinases N terminal domain 115 175 2.5E-7 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 PIRSF PIRSF000530 10 387 8.7E-77 T 13-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 SUPERFAMILY SSF55060 206 364 1.67E-34 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 SUPERFAMILY SSF54211 20 203 8.35E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 PRINTS PR00959 Mevalonate kinase family signature 27 51 3.4E-22 T 13-10-2018 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 PRINTS PR00959 Mevalonate kinase family signature 332 349 3.4E-22 T 13-10-2018 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 PRINTS PR00959 Mevalonate kinase family signature 119 141 3.4E-22 T 13-10-2018 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 Gene3D G3DSA:3.30.230.10 24 201 8.6E-91 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 Pfam PF08544 GHMP kinases C terminal 284 359 2.1E-9 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 Pfam PF10509 Galactokinase galactose-binding signature 21 59 1.4E-6 T 13-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 Gene3D G3DSA:3.30.70.890 202 361 8.6E-91 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 PRINTS PR00473 Galactokinase signature 268 282 2.1E-12 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 PRINTS PR00473 Galactokinase signature 29 47 2.1E-12 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 PRINTS PR00473 Galactokinase signature 92 103 2.1E-12 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_2801 f4f3a5a7c6e753770e1c7d34c352c398 388 PRINTS PR00473 Galactokinase signature 112 130 2.1E-12 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 TREPR_3706 a314ec56f14b4ee30d9db26c315e65b8 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_3706 a314ec56f14b4ee30d9db26c315e65b8 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_3706 a314ec56f14b4ee30d9db26c315e65b8 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 4.3E-17 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_3706 a314ec56f14b4ee30d9db26c315e65b8 192 Gene3D G3DSA:1.10.357.10 4 190 1.6E-30 T 13-10-2018 TREPR_3706 a314ec56f14b4ee30d9db26c315e65b8 192 SUPERFAMILY SSF46689 6 78 9.75E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_0568 fa0f624a25f0f350063b478d5aad74c8 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 254 6.7E-9 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0568 fa0f624a25f0f350063b478d5aad74c8 277 SUPERFAMILY SSF161098 2 255 3.53E-48 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0568 fa0f624a25f0f350063b478d5aad74c8 277 Gene3D G3DSA:1.10.3720.10 2 267 9.2E-45 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0589 87a6287d2db0301e2576f149306c3fad 490 Gene3D G3DSA:3.20.20.140 134 476 2.8E-133 T 13-10-2018 TREPR_0589 87a6287d2db0301e2576f149306c3fad 490 Pfam PF02614 Glucuronate isomerase 4 474 2.6E-199 T 13-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 TREPR_0589 87a6287d2db0301e2576f149306c3fad 490 Gene3D G3DSA:3.20.20.140 4 49 7.5E-10 T 13-10-2018 TREPR_0589 87a6287d2db0301e2576f149306c3fad 490 SUPERFAMILY SSF51556 5 474 2.61E-166 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_0589 87a6287d2db0301e2576f149306c3fad 490 Gene3D G3DSA:1.10.2020.10 50 133 5.2E-41 T 13-10-2018 TREPR_0589 87a6287d2db0301e2576f149306c3fad 490 Hamap MF_00675 Uronate isomerase [uxaC]. 3 476 45.969 T 13-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 SUPERFAMILY SSF54980 402 479 1.19E-19 T 13-10-2018 IPR035647 EF-G domain III/V-like TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 SMART SM00889 478 596 1.1E-19 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Pfam PF03144 Elongation factor Tu domain 2 322 388 2.7E-11 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 SMART SM00838 598 678 5.8E-24 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 SUPERFAMILY SSF50447 264 402 9.42E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Gene3D G3DSA:3.30.230.10 482 676 8.7E-56 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Gene3D G3DSA:2.40.30.10 291 403 5.5E-34 T 13-10-2018 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Pfam PF14492 Elongation Factor G, domain II 402 475 4.5E-27 T 13-10-2018 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Pfam PF03764 Elongation factor G, domain IV 477 595 2.9E-22 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 676 2.7E-240 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 SUPERFAMILY SSF54211 477 597 2.12E-24 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Gene3D G3DSA:3.30.70.240 602 672 8.7E-56 T 13-10-2018 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 SUPERFAMILY SSF54980 601 676 7.67E-21 T 13-10-2018 IPR035647 EF-G domain III/V-like TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Pfam PF00679 Elongation factor G C-terminus 598 676 6.6E-22 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Gene3D G3DSA:3.30.70.870 404 481 1.0E-25 T 13-10-2018 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 SUPERFAMILY SSF52540 3 279 1.22E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 179 1.1E-34 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.1E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 PRINTS PR00315 GTP-binding elongation factor signature 53 61 1.1E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.1E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.1E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.1E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Hamap MF_00054_B Elongation factor G [fusA]. 1 678 91.274 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Pfam PF00009 Elongation factor Tu GTP binding domain 5 279 8.5E-65 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1588 6da98a04bb7d574a98f8b247a4a97d44 680 Gene3D G3DSA:3.40.50.300 2 290 2.8E-108 T 13-10-2018 TREPR_0217 748e03b5d2a4e3c1a13817776834b9b0 76 SUPERFAMILY SSF143120 2 40 9.42E-5 T 13-10-2018 IPR036165 YefM-like superfamily TREPR_0319 748e03b5d2a4e3c1a13817776834b9b0 76 SUPERFAMILY SSF143120 2 40 9.42E-5 T 13-10-2018 IPR036165 YefM-like superfamily TREPR_0373 4bc73c1b6d71cc4be3b8e931bbf212a4 305 PIRSF PIRSF000450 1 305 1.4E-136 T 13-10-2018 IPR033752 MetA family TREPR_0373 4bc73c1b6d71cc4be3b8e931bbf212a4 305 Pfam PF04204 Homoserine O-succinyltransferase 2 300 3.6E-126 T 13-10-2018 IPR033752 MetA family TREPR_0373 4bc73c1b6d71cc4be3b8e931bbf212a4 305 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 291 2.0E-86 T 13-10-2018 TREPR_0373 4bc73c1b6d71cc4be3b8e931bbf212a4 305 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 5.6E-122 T 13-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 TREPR_0373 4bc73c1b6d71cc4be3b8e931bbf212a4 305 SUPERFAMILY SSF52317 17 298 1.1E-95 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0373 4bc73c1b6d71cc4be3b8e931bbf212a4 305 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 300 41.056 T 13-10-2018 IPR033752 MetA family TREPR_0373 4bc73c1b6d71cc4be3b8e931bbf212a4 305 Gene3D G3DSA:3.40.50.880 1 302 4.0E-121 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 Gene3D G3DSA:3.20.20.80 1 449 4.3E-159 T 13-10-2018 TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 SUPERFAMILY SSF51445 2 444 6.04E-147 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 Pfam PF00232 Glycosyl hydrolase family 1 3 446 1.1E-143 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 409 3.1E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 382 3.1E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 428 3.1E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 3.1E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 3.1E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1605 9206287b781a0b001322ac8b0399ea84 449 TIGRFAM TIGR03356 BGL: beta-galactosidase 3 438 1.3E-156 T 13-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 TREPR_3197 ad6c0ec7ac444b3e38c10c155488d714 222 Gene3D G3DSA:3.50.30.50 4 222 9.1E-44 T 13-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TREPR_3197 ad6c0ec7ac444b3e38c10c155488d714 222 Pfam PF04199 Putative cyclase 5 157 3.3E-21 T 13-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TREPR_3197 ad6c0ec7ac444b3e38c10c155488d714 222 SUPERFAMILY SSF102198 5 220 3.66E-38 T 13-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 SUPERFAMILY SSF52317 2 230 1.21E-39 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 Gene3D G3DSA:3.40.50.880 1 225 3.9E-37 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 Gene3D G3DSA:3.40.50.620 229 431 3.7E-63 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 Pfam PF00958 GMP synthase C terminal domain 470 556 3.8E-36 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 SUPERFAMILY SSF54810 431 557 1.28E-44 T 13-10-2018 TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 SUPERFAMILY SSF52402 214 462 3.53E-44 T 13-10-2018 TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 Pfam PF02540 NAD synthase 234 307 1.2E-5 T 13-10-2018 IPR022310 NAD/GMP synthase TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 Pfam PF00117 Glutamine amidotransferase class-I 6 219 2.5E-28 T 13-10-2018 IPR017926 Glutamine amidotransferase TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 Gene3D G3DSA:3.30.300.10 432 557 1.9E-46 T 13-10-2018 TREPR_0218 41e098708e479089651c6d5e93f1ec8e 557 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 234 557 9.6E-109 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TREPR_0954 6ae3b41fb91cbbcede07c32a9d4e33c5 233 SUPERFAMILY SSF161098 7 214 2.75E-41 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0954 6ae3b41fb91cbbcede07c32a9d4e33c5 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 229 1.2E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0954 6ae3b41fb91cbbcede07c32a9d4e33c5 233 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 75 7.4E-14 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TREPR_0954 6ae3b41fb91cbbcede07c32a9d4e33c5 233 Gene3D G3DSA:1.10.3720.10 3 231 1.0E-48 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2307 55af373e79c7e1818047f3944ead8133 266 Pfam PF01061 ABC-2 type transporter 15 224 1.8E-21 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TREPR_2307 55af373e79c7e1818047f3944ead8133 266 PIRSF PIRSF006648 1 264 3.3E-36 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 SMART SM00481 5 81 2.8E-29 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 Gene3D G3DSA:3.20.20.140 2 286 3.3E-110 T 13-10-2018 TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 SUPERFAMILY SSF89550 4 267 1.41E-33 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 Gene3D G3DSA:1.10.10.1600 442 517 1.1E-23 T 13-10-2018 TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 Gene3D G3DSA:1.10.150.870 783 886 3.6E-8 T 13-10-2018 TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 309 736 2.5E-166 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 Pfam PF14579 Helix-hairpin-helix motif 810 897 1.4E-22 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 1028 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 Pfam PF02811 PHP domain 6 188 2.1E-51 T 13-10-2018 IPR004013 PHP domain GO:0003824 TREPR_3821 ef6d12d3f6050e61cdfb784d417558e2 1330 Pfam PF01336 OB-fold nucleic acid binding domain 992 1065 8.7E-8 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TREPR_3653 770071e4eb989f5771fd2f7a723429ee 491 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 359 438 4.9E-12 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TREPR_3653 770071e4eb989f5771fd2f7a723429ee 491 Gene3D G3DSA:3.30.420.40 1 102 5.2E-10 T 13-10-2018 TREPR_3653 770071e4eb989f5771fd2f7a723429ee 491 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 135 235 2.0E-7 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TREPR_3653 770071e4eb989f5771fd2f7a723429ee 491 Gene3D G3DSA:3.30.420.40 237 488 8.5E-40 T 13-10-2018 TREPR_3653 770071e4eb989f5771fd2f7a723429ee 491 Gene3D G3DSA:3.30.420.40 112 235 8.3E-17 T 13-10-2018 TREPR_3653 770071e4eb989f5771fd2f7a723429ee 491 SUPERFAMILY SSF53067 239 480 4.75E-29 T 13-10-2018 TREPR_3653 770071e4eb989f5771fd2f7a723429ee 491 SUPERFAMILY SSF53067 6 237 3.15E-24 T 13-10-2018 TREPR_3653 770071e4eb989f5771fd2f7a723429ee 491 PIRSF PIRSF000538 114 490 6.7E-45 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TREPR_3653 770071e4eb989f5771fd2f7a723429ee 491 PIRSF PIRSF000538 3 102 5.2E-4 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 Gene3D G3DSA:1.10.1790.10 297 396 1.1E-14 T 13-10-2018 TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 SUPERFAMILY SSF63520 303 395 1.83E-13 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 542 657 2.2E-4 T 13-10-2018 IPR002178 PTS EIIA type-2 domain TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 Gene3D G3DSA:1.10.10.10 4 66 5.4E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 Gene3D G3DSA:3.40.50.2300 405 491 6.5E-7 T 13-10-2018 TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 Pfam PF00874 PRD domain 306 394 1.3E-13 T 13-10-2018 IPR011608 PRD domain GO:0006355 TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 SUPERFAMILY SSF46785 7 45 4.34E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 SUPERFAMILY SSF55804 553 659 4.45E-5 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 SUPERFAMILY SSF52794 408 486 1.41E-7 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 Gene3D G3DSA:3.40.930.10 533 662 3.2E-6 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_2966 2388545f441707c0983a8baf40bcd84c 677 Pfam PF08279 HTH domain 9 65 4.7E-7 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 23 597 9.5E-212 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 Gene3D G3DSA:3.30.980.10 21 184 2.3E-57 T 13-10-2018 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 SUPERFAMILY SSF55186 19 203 1.7E-52 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 Gene3D G3DSA:3.30.54.20 87 147 2.3E-57 T 13-10-2018 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 Pfam PF03129 Anticodon binding domain 505 596 4.7E-21 T 13-10-2018 IPR004154 Anticodon-binding TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 Gene3D G3DSA:3.40.50.800 496 604 1.8E-30 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 Gene3D G3DSA:3.30.930.10 185 495 1.0E-117 T 13-10-2018 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 125 181 1.1E-10 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 17 600 32.936 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 SUPERFAMILY SSF55681 205 490 5.94E-87 T 13-10-2018 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 SMART SM00863 124 181 1.4E-19 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 SUPERFAMILY SSF52954 493 600 9.36E-28 T 13-10-2018 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 471 484 2.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 428 456 2.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 498 510 2.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 293 321 2.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 326 349 2.1E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TREPR_0136 b229ad2cb2b9141f9220cb7bc5e9bc12 605 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 286 492 3.8E-40 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_1421 54ea53cec114358356fcb58df93025ce 200 SUPERFAMILY SSF53271 3 155 2.84E-32 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_1421 54ea53cec114358356fcb58df93025ce 200 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 6 193 1.5E-57 T 13-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_1421 54ea53cec114358356fcb58df93025ce 200 Pfam PF00156 Phosphoribosyl transferase domain 51 154 1.4E-11 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TREPR_1421 54ea53cec114358356fcb58df93025ce 200 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 200 25.441 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_1421 54ea53cec114358356fcb58df93025ce 200 Gene3D G3DSA:3.40.50.2020 3 197 1.0E-51 T 13-10-2018 TREPR_2214 af83b91b152318eec0f885b301496f91 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 166 1.0E-14 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TREPR_2214 af83b91b152318eec0f885b301496f91 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 176 189 1.0E-14 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TREPR_2214 af83b91b152318eec0f885b301496f91 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 92 103 1.0E-14 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TREPR_2214 af83b91b152318eec0f885b301496f91 439 SMART SM00936 327 415 9.0E-8 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TREPR_2214 af83b91b152318eec0f885b301496f91 439 SUPERFAMILY SSF69189 336 417 2.55E-12 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TREPR_2214 af83b91b152318eec0f885b301496f91 439 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 61 303 4.3E-51 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 TREPR_2214 af83b91b152318eec0f885b301496f91 439 SUPERFAMILY SSF56601 36 327 8.3E-64 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TREPR_2214 af83b91b152318eec0f885b301496f91 439 Gene3D G3DSA:3.40.710.10 54 325 9.8E-72 T 13-10-2018 TREPR_2214 af83b91b152318eec0f885b301496f91 439 Gene3D G3DSA:2.60.410.10 328 415 2.7E-9 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TREPR_2214 af83b91b152318eec0f885b301496f91 439 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 341 415 4.5E-8 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TREPR_2884 ccffad2f6af299ae804dcb7654d212c3 462 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 20 447 1.7E-117 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_2884 ccffad2f6af299ae804dcb7654d212c3 462 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 38 45 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 TREPR_2884 ccffad2f6af299ae804dcb7654d212c3 462 SUPERFAMILY SSF53807 12 454 1.14E-126 T 13-10-2018 TREPR_2884 ccffad2f6af299ae804dcb7654d212c3 462 Gene3D G3DSA:3.40.50.1980 20 166 5.8E-143 T 13-10-2018 TREPR_2884 ccffad2f6af299ae804dcb7654d212c3 462 Gene3D G3DSA:3.40.50.1980 14 430 5.8E-143 T 13-10-2018 TREPR_2884 ccffad2f6af299ae804dcb7654d212c3 462 Gene3D G3DSA:1.20.89.10 276 452 5.8E-143 T 13-10-2018 TREPR_2884 ccffad2f6af299ae804dcb7654d212c3 462 Gene3D G3DSA:3.40.50.1980 168 437 5.8E-143 T 13-10-2018 TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 Pfam PF01769 Divalent cation transporter 316 438 6.8E-30 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 SUPERFAMILY SSF158791 13 127 8.37E-29 T 13-10-2018 TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 Pfam PF00571 CBS domain 130 186 4.6E-4 T 13-10-2018 IPR000644 CBS domain TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 Pfam PF00571 CBS domain 194 249 6.6E-8 T 13-10-2018 IPR000644 CBS domain TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 Gene3D G3DSA:1.10.357.20 268 445 7.9E-57 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 Pfam PF03448 MgtE intracellular N domain 27 128 1.4E-28 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 Gene3D G3DSA:3.10.580.10 126 254 2.6E-40 T 13-10-2018 TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 SUPERFAMILY SSF161093 273 445 2.09E-47 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 SUPERFAMILY SSF54631 130 269 8.21E-31 T 13-10-2018 TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 SMART SM00116 201 249 1.7E-6 T 13-10-2018 IPR000644 CBS domain TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 Gene3D G3DSA:1.25.60.10 2 125 1.3E-28 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 SMART SM00924 27 130 8.4E-33 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TREPR_3672 9683b55a5a7c2e665f022bc46cdf0b44 447 TIGRFAM TIGR00400 mgtE: magnesium transporter 2 446 1.5E-138 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 TREPR_1983 ecb10b743cf93cbdfc540d546ad786d7 234 SUPERFAMILY SSF89550 2 218 1.01E-25 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TREPR_1983 ecb10b743cf93cbdfc540d546ad786d7 234 Pfam PF13263 PHP-associated 164 217 2.3E-9 T 13-10-2018 TREPR_1983 ecb10b743cf93cbdfc540d546ad786d7 234 Pfam PF02811 PHP domain 9 141 1.7E-8 T 13-10-2018 IPR004013 PHP domain GO:0003824 TREPR_1983 ecb10b743cf93cbdfc540d546ad786d7 234 Gene3D G3DSA:3.20.20.140 2 227 6.1E-28 T 13-10-2018 TREPR_2345 fd587e1ffe994c289ef701db7101a76d 572 SUPERFAMILY SSF52058 367 521 9.35E-10 T 13-10-2018 TREPR_2345 fd587e1ffe994c289ef701db7101a76d 572 Pfam PF13306 Leucine rich repeats (6 copies) 400 454 3.5E-6 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_2345 fd587e1ffe994c289ef701db7101a76d 572 Pfam PF13306 Leucine rich repeats (6 copies) 461 544 9.1E-9 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_2345 fd587e1ffe994c289ef701db7101a76d 572 Gene3D G3DSA:3.80.10.10 344 562 3.7E-29 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 Gene3D G3DSA:3.30.750.44 66 363 9.9E-83 T 13-10-2018 TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 121 196 2.6E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 SUPERFAMILY SSF50156 91 222 8.41E-19 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 SMART SM00228 120 199 1.2E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 Pfam PF03572 Peptidase family S41 224 387 8.7E-48 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 Gene3D G3DSA:2.30.42.10 120 214 9.9E-83 T 13-10-2018 TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 SMART SM00245 200 388 4.2E-71 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 SUPERFAMILY SSF52096 63 392 8.95E-64 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 74 399 2.7E-91 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 TREPR_0060 04263bf6202e29a55dae8fe423a1432a 505 Gene3D G3DSA:3.90.226.10 215 385 9.9E-83 T 13-10-2018 TREPR_2666 b92c215a9b2882b450f221202b4af111 580 SUPERFAMILY SSF52540 331 571 7.99E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2666 b92c215a9b2882b450f221202b4af111 580 Gene3D G3DSA:3.40.50.300 330 579 1.3E-88 T 13-10-2018 TREPR_2666 b92c215a9b2882b450f221202b4af111 580 SMART SM00382 361 547 4.3E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2666 b92c215a9b2882b450f221202b4af111 580 Pfam PF00664 ABC transporter transmembrane region 19 290 1.2E-38 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TREPR_2666 b92c215a9b2882b450f221202b4af111 580 Pfam PF00005 ABC transporter 352 499 3.5E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2666 b92c215a9b2882b450f221202b4af111 580 SUPERFAMILY SSF90123 6 315 2.22E-62 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_2666 b92c215a9b2882b450f221202b4af111 580 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2666 b92c215a9b2882b450f221202b4af111 580 Gene3D G3DSA:1.20.1560.10 2 316 1.0E-68 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_0929 e5fa91196c4dbe10e245e57c4f477458 128 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 61 128 2.4E-28 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0929 e5fa91196c4dbe10e245e57c4f477458 128 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 128 25.431 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0929 e5fa91196c4dbe10e245e57c4f477458 128 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 1.1E-21 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0929 e5fa91196c4dbe10e245e57c4f477458 128 Gene3D G3DSA:3.30.1390.10 57 128 2.9E-30 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TREPR_0929 e5fa91196c4dbe10e245e57c4f477458 128 SUPERFAMILY SSF54736 56 127 4.36E-23 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TREPR_0929 e5fa91196c4dbe10e245e57c4f477458 128 SUPERFAMILY SSF48300 5 63 7.32E-19 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0929 e5fa91196c4dbe10e245e57c4f477458 128 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 63 128 1.0E-17 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0929 e5fa91196c4dbe10e245e57c4f477458 128 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 127 2.3E-50 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0929 e5fa91196c4dbe10e245e57c4f477458 128 Gene3D G3DSA:1.20.5.710 4 56 1.9E-23 T 13-10-2018 TREPR_2385 0278b05e8cbc9d7f7451d03f592c6690 373 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 17 357 1.0E-144 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 TREPR_2385 0278b05e8cbc9d7f7451d03f592c6690 373 Gene3D G3DSA:3.40.50.720 17 342 1.7E-125 T 13-10-2018 TREPR_2385 0278b05e8cbc9d7f7451d03f592c6690 373 SUPERFAMILY SSF51735 16 352 2.67E-89 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2385 0278b05e8cbc9d7f7451d03f592c6690 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 19 343 4.8E-102 T 13-10-2018 IPR016040 NAD(P)-binding domain TREPR_2385 0278b05e8cbc9d7f7451d03f592c6690 373 Gene3D G3DSA:3.90.25.10 221 350 1.7E-125 T 13-10-2018 TREPR_3163 072eaa15f6ab51d38686f39e15ad282e 375 Pfam PF13492 GAF domain 57 196 8.3E-8 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_3163 072eaa15f6ab51d38686f39e15ad282e 375 Gene3D G3DSA:3.30.450.40 34 194 1.3E-10 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_3163 072eaa15f6ab51d38686f39e15ad282e 375 Gene3D G3DSA:3.30.70.270 195 366 5.0E-51 T 13-10-2018 TREPR_3163 072eaa15f6ab51d38686f39e15ad282e 375 SMART SM00065 57 204 0.0063 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_3163 072eaa15f6ab51d38686f39e15ad282e 375 SMART SM00267 191 365 7.2E-54 T 13-10-2018 IPR000160 GGDEF domain TREPR_3163 072eaa15f6ab51d38686f39e15ad282e 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 364 3.5E-48 T 13-10-2018 IPR000160 GGDEF domain TREPR_3163 072eaa15f6ab51d38686f39e15ad282e 375 SUPERFAMILY SSF55073 209 367 4.87E-45 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_3163 072eaa15f6ab51d38686f39e15ad282e 375 SUPERFAMILY SSF55781 41 205 3.27E-11 T 13-10-2018 TREPR_3163 072eaa15f6ab51d38686f39e15ad282e 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 205 361 8.1E-44 T 13-10-2018 IPR000160 GGDEF domain TREPR_0836 fca4c76950de6a6a0503792b2984424a 417 SUPERFAMILY SSF53383 63 416 6.05E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0836 fca4c76950de6a6a0503792b2984424a 417 Gene3D G3DSA:3.90.1150.10 286 417 7.9E-46 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0836 fca4c76950de6a6a0503792b2984424a 417 PIRSF PIRSF001434 34 417 5.7E-134 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0836 fca4c76950de6a6a0503792b2984424a 417 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 44 416 7.4E-143 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0836 fca4c76950de6a6a0503792b2984424a 417 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 227 241 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0836 fca4c76950de6a6a0503792b2984424a 417 Gene3D G3DSA:3.40.640.10 39 285 7.0E-85 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0244 8ff101a310c696ff43fe252fb7f60472 84 SUPERFAMILY SSF64307 5 80 7.72E-20 T 13-10-2018 IPR036868 TusA-like domain superfamily TREPR_0244 8ff101a310c696ff43fe252fb7f60472 84 Gene3D G3DSA:3.30.110.40 7 79 2.3E-18 T 13-10-2018 IPR036868 TusA-like domain superfamily TREPR_0244 8ff101a310c696ff43fe252fb7f60472 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 11 35 - T 13-10-2018 IPR001455 TusA-like domain TREPR_0244 8ff101a310c696ff43fe252fb7f60472 84 Pfam PF01206 Sulfurtransferase TusA 10 78 4.4E-19 T 13-10-2018 IPR001455 TusA-like domain TREPR_1128 d9947bb5f979a7d1aae3e89e332eb00f 281 Gene3D G3DSA:3.40.50.300 14 267 2.3E-67 T 13-10-2018 TREPR_1128 d9947bb5f979a7d1aae3e89e332eb00f 281 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1128 d9947bb5f979a7d1aae3e89e332eb00f 281 Pfam PF00005 ABC transporter 36 185 3.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1128 d9947bb5f979a7d1aae3e89e332eb00f 281 SUPERFAMILY SSF52540 13 245 1.84E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1128 d9947bb5f979a7d1aae3e89e332eb00f 281 SMART SM00382 45 233 3.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 SUPERFAMILY SSF54814 2 108 4.19E-32 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 SUPERFAMILY SSF54821 110 207 4.97E-33 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 Pfam PF07650 KH domain 49 111 2.1E-15 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 SMART SM00322 62 127 1.3E-4 T 13-10-2018 IPR004087 K Homology domain GO:0003676 TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 Gene3D G3DSA:3.30.1140.32 110 210 2.5E-36 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 213 7.2E-87 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 Gene3D G3DSA:3.30.300.20 17 109 2.4E-26 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 ProSitePatterns PS00548 Ribosomal protein S3 signature. 166 200 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 Pfam PF00189 Ribosomal protein S3, C-terminal domain 122 205 1.5E-34 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1483 3bc2ad0f8918dfe53851ac1f2ff9c340 235 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 209 36.023 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TREPR_0141 c7ef72497d1af7eea395711c02f6b32e 358 Pfam PF01522 Polysaccharide deacetylase 144 244 3.6E-14 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 TREPR_0141 c7ef72497d1af7eea395711c02f6b32e 358 Gene3D G3DSA:3.20.20.370 114 346 1.8E-20 T 13-10-2018 TREPR_0141 c7ef72497d1af7eea395711c02f6b32e 358 SUPERFAMILY SSF88713 136 343 7.51E-23 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TREPR_0111 be28c557b8bdecc3ed8c984eb796ec17 238 Pfam PF04773 FecR protein 63 153 6.4E-10 T 13-10-2018 IPR006860 FecR protein TREPR_0734 3f49dd0848eddcd50c345f8aa9ad98df 98 Pfam PF00708 Acylphosphatase 15 97 9.5E-28 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TREPR_0734 3f49dd0848eddcd50c345f8aa9ad98df 98 SUPERFAMILY SSF54975 12 97 2.18E-29 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TREPR_0734 3f49dd0848eddcd50c345f8aa9ad98df 98 Gene3D G3DSA:3.30.70.100 12 97 3.9E-31 T 13-10-2018 TREPR_0734 3f49dd0848eddcd50c345f8aa9ad98df 98 PRINTS PR00112 Acylphosphatase signature 33 58 2.4E-8 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TREPR_0734 3f49dd0848eddcd50c345f8aa9ad98df 98 PRINTS PR00112 Acylphosphatase signature 12 27 2.4E-8 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TREPR_0734 3f49dd0848eddcd50c345f8aa9ad98df 98 ProSitePatterns PS00151 Acylphosphatase signature 2. 41 57 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TREPR_0734 3f49dd0848eddcd50c345f8aa9ad98df 98 ProSitePatterns PS00150 Acylphosphatase signature 1. 17 27 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 Gene3D G3DSA:3.10.50.30 814 896 2.2E-20 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 Hamap MF_00105 Transcription elongation factor GreA [greA]. 740 893 24.048 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 Pfam PF03449 Transcription elongation factor, N-terminal 744 811 2.2E-16 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 SUPERFAMILY SSF54534 818 892 4.19E-16 T 13-10-2018 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 858 874 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 820 893 6.4E-23 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 SUPERFAMILY SSF46557 743 815 1.15E-16 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 Gene3D G3DSA:1.10.287.180 741 813 4.0E-15 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 SMART SM00028 150 183 3.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 SMART SM00028 278 311 48.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 SUPERFAMILY SSF48452 138 319 4.93E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1717 8342a8b9b39cb57d62009406a6a09670 897 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 744 892 1.6E-44 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 PRINTS PR00149 Fumarate lyase superfamily signature 288 304 2.2E-15 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 PRINTS PR00149 Fumarate lyase superfamily signature 109 127 2.2E-15 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 2.2E-15 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 Gene3D G3DSA:1.10.275.10 11 110 9.0E-8 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 SMART SM00998 391 461 0.0071 T 13-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 ProSitePatterns PS00163 Fumarate lyases signature. 288 297 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 PRINTS PR00145 Argininosuccinate lyase family signature 243 267 3.2E-6 T 13-10-2018 TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 3.2E-6 T 13-10-2018 TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 PRINTS PR00145 Argininosuccinate lyase family signature 288 304 3.2E-6 T 13-10-2018 TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 Gene3D G3DSA:1.20.200.10 111 378 2.1E-71 T 13-10-2018 TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 Pfam PF00206 Lyase 61 305 1.4E-33 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal TREPR_0227 236653b1eb75282d06a3dd05b51e7995 490 SUPERFAMILY SSF48557 32 437 3.46E-64 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 TREPR_3094 183dae1c575ed582f72a664b257a3656 454 Pfam PF02256 Iron hydrogenase small subunit 401 453 3.6E-19 T 13-10-2018 IPR003149 Iron hydrogenase, small subunit TREPR_3094 183dae1c575ed582f72a664b257a3656 454 Pfam PF13237 4Fe-4S dicluster domain 4 51 9.0E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3094 183dae1c575ed582f72a664b257a3656 454 Gene3D G3DSA:4.10.260.20 396 454 7.1E-18 T 13-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily TREPR_3094 183dae1c575ed582f72a664b257a3656 454 SMART SM00902 396 453 1.3E-20 T 13-10-2018 IPR003149 Iron hydrogenase, small subunit TREPR_3094 183dae1c575ed582f72a664b257a3656 454 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 11 22 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3094 183dae1c575ed582f72a664b257a3656 454 SUPERFAMILY SSF53920 40 452 7.85E-123 T 13-10-2018 IPR009016 Iron hydrogenase TREPR_3094 183dae1c575ed582f72a664b257a3656 454 Gene3D G3DSA:3.40.950.10 152 381 4.8E-125 T 13-10-2018 TREPR_3094 183dae1c575ed582f72a664b257a3656 454 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 81 391 1.8E-124 T 13-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 TREPR_3094 183dae1c575ed582f72a664b257a3656 454 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 105 387 6.1E-90 T 13-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TREPR_3094 183dae1c575ed582f72a664b257a3656 454 Gene3D G3DSA:3.30.70.20 6 55 1.3E-10 T 13-10-2018 TREPR_3094 183dae1c575ed582f72a664b257a3656 454 SUPERFAMILY SSF54862 4 82 6.28E-14 T 13-10-2018 TREPR_3094 183dae1c575ed582f72a664b257a3656 454 Gene3D G3DSA:3.40.50.1780 86 390 4.8E-125 T 13-10-2018 TREPR_3868 a5bbcd5b3d65568035cb5aef1817b074 197 Gene3D G3DSA:3.30.420.10 5 197 3.0E-32 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_3868 a5bbcd5b3d65568035cb5aef1817b074 197 SMART SM00479 4 197 8.5E-4 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TREPR_3868 a5bbcd5b3d65568035cb5aef1817b074 197 Pfam PF00929 Exonuclease 7 191 8.6E-12 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TREPR_3868 a5bbcd5b3d65568035cb5aef1817b074 197 SUPERFAMILY SSF53098 5 197 5.36E-26 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_2052 e24e157e718251bcdbe894250b85bf06 464 SMART SM00885 30 182 6.7E-36 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal TREPR_2052 e24e157e718251bcdbe894250b85bf06 464 Pfam PF03288 Poxvirus D5 protein-like 388 441 2.1E-6 T 13-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal TREPR_2052 e24e157e718251bcdbe894250b85bf06 464 Gene3D G3DSA:3.40.50.300 162 361 5.5E-7 T 13-10-2018 TREPR_2052 e24e157e718251bcdbe894250b85bf06 464 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 131 430 2.1E-94 T 13-10-2018 IPR006500 DNA primase, phage/plasmid TREPR_2052 e24e157e718251bcdbe894250b85bf06 464 Pfam PF08706 D5 N terminal like 30 181 1.6E-29 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal TREPR_2052 e24e157e718251bcdbe894250b85bf06 464 SUPERFAMILY SSF52540 172 361 2.13E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1309 e9f3d820e07b0c09658156d31ba879aa 293 SUPERFAMILY SSF48179 161 285 5.71E-38 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TREPR_1309 e9f3d820e07b0c09658156d31ba879aa 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 TREPR_1309 e9f3d820e07b0c09658156d31ba879aa 293 PIRSF PIRSF000103 1 292 3.7E-88 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 TREPR_1309 e9f3d820e07b0c09658156d31ba879aa 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 283 1.6E-40 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TREPR_1309 e9f3d820e07b0c09658156d31ba879aa 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 158 1.2E-49 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TREPR_1309 e9f3d820e07b0c09658156d31ba879aa 293 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 291 3.0E-123 T 13-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 TREPR_1309 e9f3d820e07b0c09658156d31ba879aa 293 Gene3D G3DSA:3.40.50.720 1 162 6.2E-54 T 13-10-2018 TREPR_1309 e9f3d820e07b0c09658156d31ba879aa 293 SUPERFAMILY SSF51735 1 161 6.31E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1309 e9f3d820e07b0c09658156d31ba879aa 293 Gene3D G3DSA:1.10.1040.10 163 293 2.4E-38 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TREPR_2992 6528f8144a82b564c2b07c4a80f7054e 367 Gene3D G3DSA:3.40.1190.20 1 367 3.0E-113 T 13-10-2018 IPR029056 Ribokinase-like TREPR_2992 6528f8144a82b564c2b07c4a80f7054e 367 SUPERFAMILY SSF53613 6 357 1.96E-62 T 13-10-2018 IPR029056 Ribokinase-like TREPR_2992 6528f8144a82b564c2b07c4a80f7054e 367 Pfam PF00294 pfkB family carbohydrate kinase 33 338 1.1E-25 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB TREPR_2366 6ab227147c7703f5a105342da7ac57de 604 Pfam PF00266 Aminotransferase class-V 271 536 9.8E-26 T 13-10-2018 IPR000192 Aminotransferase class V domain TREPR_2366 6ab227147c7703f5a105342da7ac57de 604 SUPERFAMILY SSF53448 1 229 5.86E-25 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2366 6ab227147c7703f5a105342da7ac57de 604 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 246 600 2.0E-113 T 13-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 TREPR_2366 6ab227147c7703f5a105342da7ac57de 604 SUPERFAMILY SSF53383 246 601 8.25E-77 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_2366 6ab227147c7703f5a105342da7ac57de 604 Gene3D G3DSA:3.90.1150.10 247 599 3.1E-98 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_2366 6ab227147c7703f5a105342da7ac57de 604 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 246 604 117.534 T 13-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 TREPR_2366 6ab227147c7703f5a105342da7ac57de 604 Gene3D G3DSA:3.90.550.10 1 230 4.1E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2366 6ab227147c7703f5a105342da7ac57de 604 Pfam PF12804 MobA-like NTP transferase domain 1 99 1.2E-7 T 13-10-2018 IPR025877 MobA-like NTP transferase TREPR_2366 6ab227147c7703f5a105342da7ac57de 604 Gene3D G3DSA:3.40.640.10 256 501 3.1E-98 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_2964 becf24b5ecd28363999449e70eadc229 324 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 316 1.1E-89 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 TREPR_2964 becf24b5ecd28363999449e70eadc229 324 Pfam PF00294 pfkB family carbohydrate kinase 17 302 4.0E-47 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB TREPR_2964 becf24b5ecd28363999449e70eadc229 324 PIRSF PIRSF000535 1 319 1.5E-79 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 TREPR_2964 becf24b5ecd28363999449e70eadc229 324 Gene3D G3DSA:3.40.1190.20 1 322 4.4E-98 T 13-10-2018 IPR029056 Ribokinase-like TREPR_2964 becf24b5ecd28363999449e70eadc229 324 SUPERFAMILY SSF53613 1 306 5.3E-65 T 13-10-2018 IPR029056 Ribokinase-like TREPR_2964 becf24b5ecd28363999449e70eadc229 324 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TREPR_2964 becf24b5ecd28363999449e70eadc229 324 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TREPR_3125 ed79b05c02c227d60a47c0275756956d 209 Gene3D G3DSA:1.20.120.680 7 209 1.7E-63 T 13-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 TREPR_3125 ed79b05c02c227d60a47c0275756956d 209 SUPERFAMILY SSF101262 4 208 4.18E-58 T 13-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 TREPR_3125 ed79b05c02c227d60a47c0275756956d 209 Pfam PF04961 Formiminotransferase-cyclodeaminase 8 187 1.4E-64 T 13-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 Gene3D G3DSA:3.30.465.10 166 257 4.5E-22 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 Gene3D G3DSA:3.10.580.10 16 165 3.0E-55 T 13-10-2018 TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 SUPERFAMILY SSF56176 168 254 3.0E-21 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 SUPERFAMILY SSF54631 32 174 4.04E-34 T 13-10-2018 TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 SMART SM00116 46 95 0.0033 T 13-10-2018 IPR000644 CBS domain TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 SMART SM00116 108 156 3.1 T 13-10-2018 IPR000644 CBS domain TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 Pfam PF03471 Transporter associated domain 172 247 7.2E-21 T 13-10-2018 IPR005170 Transporter-associated domain TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 SMART SM01091 171 249 3.1E-24 T 13-10-2018 IPR005170 Transporter-associated domain TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 Pfam PF00571 CBS domain 107 155 6.9E-6 T 13-10-2018 IPR000644 CBS domain TREPR_1689 ff0396853b946e89d2de5e9608ac645f 266 Pfam PF00571 CBS domain 37 95 2.3E-6 T 13-10-2018 IPR000644 CBS domain TREPR_2978 d1249714ae7d421670fb52021c18d698 726 Gene3D G3DSA:3.30.450.20 80 163 4.1E-10 T 13-10-2018 TREPR_2978 d1249714ae7d421670fb52021c18d698 726 SMART SM00304 339 391 1.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_2978 d1249714ae7d421670fb52021c18d698 726 Gene3D G3DSA:3.30.450.20 196 302 1.1E-16 T 13-10-2018 TREPR_2978 d1249714ae7d421670fb52021c18d698 726 SUPERFAMILY SSF58104 359 685 2.09E-50 T 13-10-2018 TREPR_2978 d1249714ae7d421670fb52021c18d698 726 Gene3D G3DSA:1.20.1480.50 303 395 4.7E-12 T 13-10-2018 TREPR_2978 d1249714ae7d421670fb52021c18d698 726 SMART SM00283 434 681 6.1E-47 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_2978 d1249714ae7d421670fb52021c18d698 726 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 501 649 1.8E-26 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_2978 d1249714ae7d421670fb52021c18d698 726 Gene3D G3DSA:1.10.287.950 428 677 3.5E-47 T 13-10-2018 TREPR_0733 ae4769e83c194dbd58ea76fed63a87db 447 Pfam PF01554 MatE 16 177 2.6E-26 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0733 ae4769e83c194dbd58ea76fed63a87db 447 Pfam PF01554 MatE 241 403 6.5E-21 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0733 ae4769e83c194dbd58ea76fed63a87db 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 416 1.1E-64 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0733 ae4769e83c194dbd58ea76fed63a87db 447 PIRSF PIRSF006603 7 447 2.9E-86 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0607 ac9096ca01b56bc1b1557b4d676fcc7f 258 SMART SM00967 10 85 8.2E-12 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TREPR_0607 ac9096ca01b56bc1b1557b4d676fcc7f 258 Gene3D G3DSA:3.40.1280.10 100 258 3.4E-32 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TREPR_0607 ac9096ca01b56bc1b1557b4d676fcc7f 258 Pfam PF00588 SpoU rRNA Methylase family 103 251 4.7E-28 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TREPR_0607 ac9096ca01b56bc1b1557b4d676fcc7f 258 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 11 81 2.4E-12 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TREPR_0607 ac9096ca01b56bc1b1557b4d676fcc7f 258 Gene3D G3DSA:3.30.1330.30 1 81 3.5E-10 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like TREPR_0607 ac9096ca01b56bc1b1557b4d676fcc7f 258 SUPERFAMILY SSF75217 97 255 1.57E-29 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases TREPR_0607 ac9096ca01b56bc1b1557b4d676fcc7f 258 SUPERFAMILY SSF55315 6 81 7.89E-13 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like TREPR_2457 86093110d38912fa3763a8d12446056c 419 Pfam PF13432 Tetratricopeptide repeat 309 368 8.0E-4 T 13-10-2018 TREPR_2457 86093110d38912fa3763a8d12446056c 419 SUPERFAMILY SSF81301 23 207 8.34E-31 T 13-10-2018 TREPR_2457 86093110d38912fa3763a8d12446056c 419 SMART SM00954 49 179 4.3E-15 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 TREPR_2457 86093110d38912fa3763a8d12446056c 419 Gene3D G3DSA:1.25.40.10 254 369 4.6E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2457 86093110d38912fa3763a8d12446056c 419 Pfam PF04607 Region found in RelA / SpoT proteins 50 175 4.9E-20 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 TREPR_2457 86093110d38912fa3763a8d12446056c 419 Pfam PF00515 Tetratricopeptide repeat 372 402 5.3E-9 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_2457 86093110d38912fa3763a8d12446056c 419 Gene3D G3DSA:3.30.460.10 3 160 5.4E-21 T 13-10-2018 TREPR_2457 86093110d38912fa3763a8d12446056c 419 SUPERFAMILY SSF48452 266 406 6.68E-29 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2457 86093110d38912fa3763a8d12446056c 419 SMART SM00028 336 369 2.8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2457 86093110d38912fa3763a8d12446056c 419 SMART SM00028 302 335 0.0051 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2457 86093110d38912fa3763a8d12446056c 419 SMART SM00028 265 298 4.3 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2457 86093110d38912fa3763a8d12446056c 419 SMART SM00028 370 403 7.4E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2457 86093110d38912fa3763a8d12446056c 419 Gene3D G3DSA:1.25.40.10 370 419 7.6E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0354 80b2f66fdfe372b4db05d36916b3df7c 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 330 9.2E-41 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain TREPR_0354 80b2f66fdfe372b4db05d36916b3df7c 396 Gene3D G3DSA:3.90.25.40 201 311 8.1E-142 T 13-10-2018 TREPR_0354 80b2f66fdfe372b4db05d36916b3df7c 396 Gene3D G3DSA:3.40.50.720 9 369 8.1E-142 T 13-10-2018 TREPR_0354 80b2f66fdfe372b4db05d36916b3df7c 396 SUPERFAMILY SSF51735 34 283 1.27E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3534 71900b70be482eed16c14d78b2348fe0 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 293 7.9E-45 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_1799 478f2fce8e002498a5a8af35258ec519 184 SMART SM00530 11 66 4.6E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1799 478f2fce8e002498a5a8af35258ec519 184 Pfam PF01381 Helix-turn-helix 15 66 4.3E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1799 478f2fce8e002498a5a8af35258ec519 184 Gene3D G3DSA:1.10.260.40 2 73 2.5E-12 T 13-10-2018 TREPR_1799 478f2fce8e002498a5a8af35258ec519 184 SUPERFAMILY SSF47413 5 70 1.2E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1799 478f2fce8e002498a5a8af35258ec519 184 Pfam PF07883 Cupin domain 126 182 1.4E-15 T 13-10-2018 IPR013096 Cupin 2, conserved barrel TREPR_1799 478f2fce8e002498a5a8af35258ec519 184 Gene3D G3DSA:2.60.120.10 78 183 1.2E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_1799 478f2fce8e002498a5a8af35258ec519 184 SUPERFAMILY SSF51182 77 181 1.52E-25 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_2936 145eccad44e0aa42d293afc8f3bf1b99 157 Gene3D G3DSA:2.40.50.180 25 138 4.6E-40 T 13-10-2018 TREPR_2936 145eccad44e0aa42d293afc8f3bf1b99 157 SMART SM00260 2 143 3.7E-39 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_2936 145eccad44e0aa42d293afc8f3bf1b99 157 SUPERFAMILY SSF50341 5 146 4.45E-35 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TREPR_2936 145eccad44e0aa42d293afc8f3bf1b99 157 Gene3D G3DSA:2.30.30.40 8 137 4.6E-40 T 13-10-2018 TREPR_2936 145eccad44e0aa42d293afc8f3bf1b99 157 Pfam PF01584 CheW-like domain 6 145 3.8E-33 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_3255 182b73ba07935d21c534b1ef7ff1f8f1 74 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 72 1.2E-33 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TREPR_3255 182b73ba07935d21c534b1ef7ff1f8f1 74 SMART SM00316 4 74 2.7E-6 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_3255 182b73ba07935d21c534b1ef7ff1f8f1 74 Gene3D G3DSA:2.40.50.140 2 72 1.7E-34 T 13-10-2018 TREPR_3255 182b73ba07935d21c534b1ef7ff1f8f1 74 SUPERFAMILY SSF50249 2 72 5.14E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_3255 182b73ba07935d21c534b1ef7ff1f8f1 74 Pfam PF01176 Translation initiation factor 1A / IF-1 7 72 1.5E-25 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 TREPR_3255 182b73ba07935d21c534b1ef7ff1f8f1 74 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 74 26.45 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 SUPERFAMILY SSF52440 1 108 2.01E-31 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 SUPERFAMILY SSF51246 345 438 4.97E-22 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 438 1.1E-134 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 347 437 9.1E-24 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 Gene3D G3DSA:3.90.600.10 345 442 5.9E-25 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 Gene3D G3DSA:3.30.1490.20 129 201 5.0E-20 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 305 312 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 Gene3D G3DSA:3.40.50.20 2 101 8.8E-33 T 13-10-2018 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 SMART SM01210 345 439 6.0E-26 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 108 7.8E-33 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 SMART SM01209 109 311 1.3E-84 T 13-10-2018 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 109 311 1.3E-57 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 SUPERFAMILY SSF56059 110 337 6.14E-45 T 13-10-2018 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 Gene3D G3DSA:3.30.470.20 202 344 5.3E-41 T 13-10-2018 TREPR_3774 19dc102ac12f92182ce89cb85c86bf66 443 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 440 35.532 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TREPR_1916 e01d4714943069b363fd90ea48dd9b60 216 Pfam PF03358 NADPH-dependent FMN reductase 4 114 9.4E-19 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TREPR_1916 e01d4714943069b363fd90ea48dd9b60 216 Gene3D G3DSA:3.40.50.360 2 173 6.1E-30 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_1916 e01d4714943069b363fd90ea48dd9b60 216 SUPERFAMILY SSF52218 4 147 2.48E-30 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 151 190 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 Gene3D G3DSA:3.30.70.360 222 332 2.0E-157 T 13-10-2018 TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 87 96 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 TIGRFAM TIGR01882 peptidase-T: peptidase T 16 417 2.5E-121 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 PIRSF PIRSF037215 12 420 7.1E-146 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 SUPERFAMILY SSF55031 222 325 9.87E-24 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 Pfam PF01546 Peptidase family M20/M25/M40 152 415 2.6E-12 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 Gene3D G3DSA:3.40.630.10 17 413 2.0E-157 T 13-10-2018 TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 Pfam PF07687 Peptidase dimerisation domain 228 315 1.8E-7 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain TREPR_0173 734bf954d3b72ff10dbb65615ca492eb 420 SUPERFAMILY SSF53187 17 416 6.79E-69 T 13-10-2018 TREPR_3254 995e38160a756d86d29af63ad0ddedc3 456 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 12 455 27.276 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TREPR_3254 995e38160a756d86d29af63ad0ddedc3 456 ProSitePatterns PS00885 EPSP synthase signature 2. 368 386 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TREPR_3254 995e38160a756d86d29af63ad0ddedc3 456 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 16 453 3.8E-101 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TREPR_3254 995e38160a756d86d29af63ad0ddedc3 456 Gene3D G3DSA:3.65.10.10 16 452 5.3E-115 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TREPR_3254 995e38160a756d86d29af63ad0ddedc3 456 SUPERFAMILY SSF55205 16 454 5.12E-93 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TREPR_3254 995e38160a756d86d29af63ad0ddedc3 456 Gene3D G3DSA:3.65.10.10 24 258 5.3E-115 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TREPR_3254 995e38160a756d86d29af63ad0ddedc3 456 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 16 451 3.7E-83 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TREPR_3254 995e38160a756d86d29af63ad0ddedc3 456 PIRSF PIRSF000505 3 456 1.2E-110 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TREPR_0258 ec048b86010b8e4c25ba4f84278037ec 134 SUPERFAMILY SSF102712 1 130 2.75E-30 T 13-10-2018 TREPR_0258 ec048b86010b8e4c25ba4f84278037ec 134 Pfam PF14464 Prokaryotic homologs of the JAB domain 5 110 1.4E-24 T 13-10-2018 IPR028090 JAB domain, prokaryotic TREPR_0258 ec048b86010b8e4c25ba4f84278037ec 134 Gene3D G3DSA:3.40.140.10 1 134 6.7E-40 T 13-10-2018 TREPR_0258 ec048b86010b8e4c25ba4f84278037ec 134 SMART SM00232 1 132 5.9E-9 T 13-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 SUPERFAMILY SSF69336 1291 1556 1.03E-95 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 Gene3D G3DSA:3.60.20.10 26 580 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 SUPERFAMILY SSF56235 26 460 1.05E-139 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 Pfam PF01493 GXGXG motif 1322 1509 1.5E-82 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 Pfam PF01645 Conserved region in glutamate synthase 864 1239 7.8E-150 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 Pfam PF04898 Glutamate synthase central domain 494 794 7.9E-98 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 SUPERFAMILY SSF51395 479 1274 1.26E-238 T 13-10-2018 TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 Gene3D G3DSA:3.20.20.70 518 1255 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 Gene3D G3DSA:3.20.20.70 462 861 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 Gene3D G3DSA:2.160.20.60 1294 1565 9.3E-111 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 TREPR_3466 a241791a74037c60e5bff2b7645eb43a 1579 Pfam PF00310 Glutamine amidotransferases class-II 26 457 2.3E-168 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TREPR_0284 b773b5a3f22716dc2da82cf285d73b43 254 Gene3D G3DSA:3.40.50.300 2 238 3.5E-75 T 13-10-2018 TREPR_0284 b773b5a3f22716dc2da82cf285d73b43 254 SUPERFAMILY SSF52540 5 235 6.01E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0284 b773b5a3f22716dc2da82cf285d73b43 254 Pfam PF00005 ABC transporter 20 162 7.7E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0284 b773b5a3f22716dc2da82cf285d73b43 254 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0284 b773b5a3f22716dc2da82cf285d73b43 254 SMART SM00382 29 212 4.9E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3348 0e270f622f6e904bd39dd2bc34758505 428 SUPERFAMILY SSF55874 290 418 4.02E-10 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3348 0e270f622f6e904bd39dd2bc34758505 428 SUPERFAMILY SSF55781 21 195 3.93E-16 T 13-10-2018 TREPR_3348 0e270f622f6e904bd39dd2bc34758505 428 Pfam PF07730 Histidine kinase 217 278 2.4E-12 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 TREPR_3348 0e270f622f6e904bd39dd2bc34758505 428 Gene3D G3DSA:3.30.565.10 290 420 3.9E-23 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3348 0e270f622f6e904bd39dd2bc34758505 428 Pfam PF13185 GAF domain 44 187 3.9E-10 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_3348 0e270f622f6e904bd39dd2bc34758505 428 Gene3D G3DSA:3.30.450.40 16 202 6.9E-19 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_0367 aec3523098900b65de1037a40345f216 392 SUPERFAMILY SSF56059 141 365 2.12E-46 T 13-10-2018 TREPR_0367 aec3523098900b65de1037a40345f216 392 Pfam PF07478 D-ala D-ala ligase C-terminus 149 358 1.5E-47 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_0367 aec3523098900b65de1037a40345f216 392 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 360 3.6E-80 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_0367 aec3523098900b65de1037a40345f216 392 Gene3D G3DSA:3.30.1490.20 156 228 4.2E-63 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TREPR_0367 aec3523098900b65de1037a40345f216 392 Gene3D G3DSA:3.40.50.20 1 129 2.4E-33 T 13-10-2018 TREPR_0367 aec3523098900b65de1037a40345f216 392 PIRSF PIRSF039102 1 370 1.4E-91 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_0367 aec3523098900b65de1037a40345f216 392 Pfam PF01820 D-ala D-ala ligase N-terminus 4 131 2.9E-26 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_0367 aec3523098900b65de1037a40345f216 392 Gene3D G3DSA:3.30.470.20 130 364 4.2E-63 T 13-10-2018 TREPR_0367 aec3523098900b65de1037a40345f216 392 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 307 336 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_0367 aec3523098900b65de1037a40345f216 392 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 362 34.342 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_0367 aec3523098900b65de1037a40345f216 392 SUPERFAMILY SSF52440 1 140 1.15E-30 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 24 706 2.0E-228 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 Pfam PF13090 Polyphosphate kinase C-terminal domain 361 706 2.4E-149 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 PIRSF PIRSF015589 6 720 1.2E-247 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 SUPERFAMILY SSF56024 345 522 9.03E-52 T 13-10-2018 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 Gene3D G3DSA:3.30.870.10 529 713 1.4E-67 T 13-10-2018 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 SUPERFAMILY SSF140356 22 123 1.24E-28 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 Gene3D G3DSA:3.30.870.10 348 528 2.7E-70 T 13-10-2018 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 SUPERFAMILY SSF143724 128 334 6.67E-42 T 13-10-2018 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 SUPERFAMILY SSF56024 529 709 1.23E-65 T 13-10-2018 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 Gene3D G3DSA:3.30.1840.10 17 339 6.2E-86 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 Hamap MF_00347 Polyphosphate kinase [ppk]. 21 711 27.254 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 Pfam PF02503 Polyphosphate kinase middle domain 138 348 6.4E-48 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 TREPR_0669 7f96a2ea6e5e80f1f05e35742ec9c520 733 Pfam PF13089 Polyphosphate kinase N-terminal domain 24 128 1.4E-28 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 Gene3D G3DSA:3.90.1580.10 1050 1318 5.4E-60 T 13-10-2018 TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SUPERFAMILY SSF51126 407 748 3.2E-13 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 869 894 1800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 847 868 6200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 685 705 2300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 221 241 9600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 655 680 590.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 529 559 1700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 797 818 790.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 1274 1296 8600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 765 790 760.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 619 640 2400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 900 922 600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SMART SM00710 822 842 7400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SUPERFAMILY SSF51126 729 946 8.9E-11 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 Gene3D G3DSA:2.160.20.20 726 1006 7.5E-8 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 Pfam PF03781 Sulfatase-modifying factor enzyme 1 1050 1315 8.0E-39 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TREPR_0045 1fa54537a92b1416f017e7aa1ddc52ef 1318 SUPERFAMILY SSF56436 1050 1317 3.3E-43 T 13-10-2018 IPR016187 C-type lectin fold TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 Hamap MF_00580 10 kDa chaperonin [groS]. 2 88 21.907 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 Gene3D G3DSA:2.30.33.40 1 88 4.4E-30 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 SUPERFAMILY SSF50129 1 88 3.6E-28 T 13-10-2018 IPR011032 GroES-like superfamily TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 SMART SM00883 2 87 3.6E-40 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 Pfam PF00166 Chaperonin 10 Kd subunit 2 87 2.2E-28 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 PRINTS PR00297 10kDa chaperonin signature 25 46 5.5E-25 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 PRINTS PR00297 10kDa chaperonin signature 74 87 5.5E-25 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 PRINTS PR00297 10kDa chaperonin signature 3 18 5.5E-25 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TREPR_2759 7bb131bdae9dbc91a7fa637c94e07073 88 PRINTS PR00297 10kDa chaperonin signature 53 65 5.5E-25 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 SUPERFAMILY SSF101790 279 359 3.43E-22 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 Gene3D G3DSA:3.30.70.1400 52 137 1.5E-90 T 13-10-2018 TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 358 40.907 T 13-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 357 2.7E-113 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 Gene3D G3DSA:4.10.1250.10 235 276 1.3E-14 T 13-10-2018 TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 Gene3D G3DSA:2.40.30.110 278 361 3.2E-24 T 13-10-2018 TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 PIRSF PIRSF006487 1 361 7.5E-94 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 Gene3D G3DSA:3.30.1360.120 4 234 1.5E-90 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 255 1.1E-92 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 264 352 2.3E-17 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TREPR_3840 8518c63b45b7f22fcd718a245ac549fa 361 SUPERFAMILY SSF103025 3 271 1.19E-96 T 13-10-2018 TREPR_3005 1d42189de193690e3351c3346f39108e 513 Gene3D G3DSA:3.30.565.10 359 504 2.3E-9 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3005 1d42189de193690e3351c3346f39108e 513 SMART SM00304 206 259 1.6E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_3005 1d42189de193690e3351c3346f39108e 513 Gene3D G3DSA:1.20.1480.50 177 265 1.9E-9 T 13-10-2018 TREPR_3005 1d42189de193690e3351c3346f39108e 513 SUPERFAMILY SSF55874 343 461 9.95E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3005 1d42189de193690e3351c3346f39108e 513 Pfam PF06580 Histidine kinase 288 366 2.1E-19 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 TREPR_3005 1d42189de193690e3351c3346f39108e 513 Pfam PF00672 HAMP domain 206 253 3.7E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_3005 1d42189de193690e3351c3346f39108e 513 SUPERFAMILY SSF158472 206 258 1.31E-7 T 13-10-2018 TREPR_3316 707766c6c2839c25277911a121dc6520 512 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 42 510 1.1E-210 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 TREPR_3316 707766c6c2839c25277911a121dc6520 512 PIRSF PIRSF009451 13 512 2.0E-226 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 TREPR_3316 707766c6c2839c25277911a121dc6520 512 Gene3D G3DSA:3.40.1080.10 16 241 3.8E-87 T 13-10-2018 TREPR_3316 707766c6c2839c25277911a121dc6520 512 SUPERFAMILY SSF100950 40 241 2.06E-63 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_3316 707766c6c2839c25277911a121dc6520 512 SUPERFAMILY SSF100950 244 510 3.67E-56 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_3316 707766c6c2839c25277911a121dc6520 512 Gene3D G3DSA:3.40.1080.10 243 512 2.8E-118 T 13-10-2018 TREPR_3316 707766c6c2839c25277911a121dc6520 512 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 32 512 4.9E-216 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 PIRSF PIRSF002869 5 530 3.0E-133 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 PRINTS PR01806 Virulence factor MviN signature 423 440 6.9E-54 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 PRINTS PR01806 Virulence factor MviN signature 371 390 6.9E-54 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 PRINTS PR01806 Virulence factor MviN signature 59 75 6.9E-54 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 PRINTS PR01806 Virulence factor MviN signature 273 299 6.9E-54 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 PRINTS PR01806 Virulence factor MviN signature 168 189 6.9E-54 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 PRINTS PR01806 Virulence factor MviN signature 40 59 6.9E-54 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 PRINTS PR01806 Virulence factor MviN signature 144 168 6.9E-54 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 10 484 16.939 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 Pfam PF03023 MviN-like protein 36 478 1.8E-103 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_3468 e9a6e5e354793d4974c84b479fa939b9 539 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 9 522 9.2E-111 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TREPR_2983 8a6b577f489e1b0ca0756c90b3468480 213 Gene3D G3DSA:1.10.10.10 114 157 2.3E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2983 8a6b577f489e1b0ca0756c90b3468480 213 Hamap MF_01114 Regulatory protein RecX [recX]. 48 213 11.256 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TREPR_2983 8a6b577f489e1b0ca0756c90b3468480 213 Pfam PF02631 RecX family 90 211 3.5E-16 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TREPR_2608 5d86b53c1375c1e24073936bd96b50af 837 SMART SM00491 666 798 1.1E-28 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TREPR_2608 5d86b53c1375c1e24073936bd96b50af 837 Pfam PF13307 Helicase C-terminal domain 650 811 4.7E-35 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TREPR_2608 5d86b53c1375c1e24073936bd96b50af 837 Pfam PF04002 RadC-like JAB domain 11 107 5.9E-5 T 13-10-2018 IPR025657 RadC-like JAB domain TREPR_2608 5d86b53c1375c1e24073936bd96b50af 837 Gene3D G3DSA:3.40.50.300 156 420 1.6E-38 T 13-10-2018 TREPR_2608 5d86b53c1375c1e24073936bd96b50af 837 Gene3D G3DSA:3.40.50.300 635 828 1.1E-31 T 13-10-2018 TREPR_2608 5d86b53c1375c1e24073936bd96b50af 837 SUPERFAMILY SSF52540 178 791 5.53E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 308 322 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 167 180 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 Gene3D G3DSA:3.30.420.40 95 346 4.0E-107 T 13-10-2018 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 Gene3D G3DSA:2.60.34.10 347 534 5.0E-65 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 Gene3D G3DSA:3.90.640.10 199 286 4.0E-107 T 13-10-2018 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 SUPERFAMILY SSF53067 162 353 1.98E-60 T 13-10-2018 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 SUPERFAMILY SSF100920 355 506 1.96E-51 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 PRINTS PR00301 70kDa heat shock protein signature 114 134 6.3E-72 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 PRINTS PR00301 70kDa heat shock protein signature 336 356 6.3E-72 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 PRINTS PR00301 70kDa heat shock protein signature 440 456 6.3E-72 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.3E-72 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 PRINTS PR00301 70kDa heat shock protein signature 173 183 6.3E-72 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 PRINTS PR00301 70kDa heat shock protein signature 359 378 6.3E-72 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.3E-72 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 PRINTS PR00301 70kDa heat shock protein signature 305 321 6.3E-72 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 Gene3D G3DSA:3.30.420.40 1 77 8.8E-28 T 13-10-2018 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 Pfam PF00012 Hsp70 protein 4 572 1.0E-204 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 Gene3D G3DSA:3.30.420.40 160 333 4.0E-107 T 13-10-2018 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 Gene3D G3DSA:3.30.30.30 78 94 4.0E-107 T 13-10-2018 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 SUPERFAMILY SSF53067 1 159 3.67E-56 T 13-10-2018 TREPR_3307 865e07f468c6ce386cd8ae5a357eba6c 576 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TREPR_0454 092e460f6a5675628616b145869a6930 352 Gene3D G3DSA:3.30.70.270 191 352 6.3E-52 T 13-10-2018 TREPR_0454 092e460f6a5675628616b145869a6930 352 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 350 4.3E-50 T 13-10-2018 IPR000160 GGDEF domain TREPR_0454 092e460f6a5675628616b145869a6930 352 SUPERFAMILY SSF55781 28 192 2.18E-9 T 13-10-2018 TREPR_0454 092e460f6a5675628616b145869a6930 352 SMART SM00267 180 352 1.1E-48 T 13-10-2018 IPR000160 GGDEF domain TREPR_0454 092e460f6a5675628616b145869a6930 352 SUPERFAMILY SSF55073 196 350 5.89E-44 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_0454 092e460f6a5675628616b145869a6930 352 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 348 9.7E-46 T 13-10-2018 IPR000160 GGDEF domain TREPR_0454 092e460f6a5675628616b145869a6930 352 Gene3D G3DSA:3.30.450.40 16 190 1.3E-9 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_2393 ba0d17dd341535ec5630dabe425a8d9d 402 Pfam PF00534 Glycosyl transferases group 1 225 372 6.6E-16 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_2393 ba0d17dd341535ec5630dabe425a8d9d 402 SUPERFAMILY SSF53756 64 379 3.56E-27 T 13-10-2018 TREPR_2393 ba0d17dd341535ec5630dabe425a8d9d 402 Gene3D G3DSA:3.40.50.2000 204 383 4.8E-21 T 13-10-2018 TREPR_2361 212e5e5d3211df61e70b37c1a8c29de8 192 SUPERFAMILY SSF46785 6 74 2.13E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2361 212e5e5d3211df61e70b37c1a8c29de8 192 Gene3D G3DSA:1.10.10.10 6 63 9.4E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2490 87d6796e0db4f9cce2c07058b74a2c6d 153 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 8 131 4.0E-42 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 TREPR_2490 87d6796e0db4f9cce2c07058b74a2c6d 153 Pfam PF01668 SmpB protein 8 149 2.2E-55 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 TREPR_2490 87d6796e0db4f9cce2c07058b74a2c6d 153 SUPERFAMILY SSF74982 3 131 2.62E-46 T 13-10-2018 IPR023620 Small protein B TREPR_2490 87d6796e0db4f9cce2c07058b74a2c6d 153 Hamap MF_00023 SsrA-binding protein [smpB]. 1 153 62.145 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 TREPR_2490 87d6796e0db4f9cce2c07058b74a2c6d 153 Gene3D G3DSA:2.40.280.10 1 128 1.2E-43 T 13-10-2018 IPR023620 Small protein B TREPR_2490 87d6796e0db4f9cce2c07058b74a2c6d 153 TIGRFAM TIGR00086 smpB: SsrA-binding protein 7 148 1.7E-55 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 PRINTS PR00207 Flagellin signature 109 132 3.0E-22 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 PRINTS PR00207 Flagellin signature 74 93 3.0E-22 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 PRINTS PR00207 Flagellin signature 35 52 3.0E-22 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 SUPERFAMILY SSF64518 1 283 4.05E-78 T 13-10-2018 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 2.0E-38 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 Gene3D G3DSA:1.20.1330.10 43 182 6.3E-57 T 13-10-2018 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 Gene3D G3DSA:1.20.1330.10 192 243 1.3E-36 T 13-10-2018 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 Gene3D G3DSA:1.20.58.1830 249 283 1.3E-36 T 13-10-2018 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 Gene3D G3DSA:1.20.58.1830 3 31 6.3E-57 T 13-10-2018 TREPR_1931 916d2e4fff13cdf613f531d0d6579744 284 Pfam PF00700 Bacterial flagellin C-terminal helical region 199 283 5.3E-25 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 2.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 2.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 2.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 2.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 2.1E-39 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 SMART SM00562 1 138 2.4E-75 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 32.419 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 13-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 Pfam PF00334 Nucleoside diphosphate kinase 2 136 1.4E-50 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 SUPERFAMILY SSF54919 1 145 2.1E-53 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0612 98e06428ab5068a72a0cf2f072099a66 147 Gene3D G3DSA:3.30.70.141 1 147 6.5E-57 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_0293 15fe8b7ae5a25fa8b3b2df23cd28549a 248 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 21 220 1.8E-27 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TREPR_0293 15fe8b7ae5a25fa8b3b2df23cd28549a 248 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 22 246 1.3E-59 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TREPR_0293 15fe8b7ae5a25fa8b3b2df23cd28549a 248 Gene3D G3DSA:3.30.950.10 129 246 2.5E-29 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TREPR_0293 15fe8b7ae5a25fa8b3b2df23cd28549a 248 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 21 240 34.223 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TREPR_0293 15fe8b7ae5a25fa8b3b2df23cd28549a 248 Gene3D G3DSA:3.40.1010.10 9 128 3.3E-39 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TREPR_0293 15fe8b7ae5a25fa8b3b2df23cd28549a 248 SUPERFAMILY SSF53790 20 237 5.1E-66 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TREPR_0293 15fe8b7ae5a25fa8b3b2df23cd28549a 248 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 99 110 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 TREPR_0293 15fe8b7ae5a25fa8b3b2df23cd28549a 248 PIRSF PIRSF005917 10 248 1.5E-85 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 SUPERFAMILY SSF53850 373 551 4.34E-49 T 13-10-2018 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 SUPERFAMILY SSF51569 1 338 3.57E-98 T 13-10-2018 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 Gene3D G3DSA:3.20.20.70 75 335 2.3E-95 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 SUPERFAMILY SSF55021 563 649 3.24E-21 T 13-10-2018 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 Pfam PF00793 DAHP synthetase I family 88 325 4.8E-71 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 70 330 2.1E-111 T 13-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 Gene3D G3DSA:3.30.70.1140 1 74 5.3E-7 T 13-10-2018 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 Gene3D G3DSA:3.30.70.260 565 651 2.2E-22 T 13-10-2018 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 Pfam PF00800 Prephenate dehydratase 373 551 1.4E-55 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 Gene3D G3DSA:3.40.190.10 454 539 2.1E-52 T 13-10-2018 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 Gene3D G3DSA:3.40.190.10 373 546 2.1E-52 T 13-10-2018 TREPR_0966 bc1324f4e208221a7f754889608e079f 652 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 598 605 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 Gene3D G3DSA:3.30.420.40 9 322 1.1E-125 T 13-10-2018 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 SUPERFAMILY SSF53067 145 327 3.65E-49 T 13-10-2018 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 Pfam PF06723 MreB/Mbl protein 7 328 1.1E-144 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 1.5E-56 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 1.5E-56 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 1.5E-56 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 1.5E-56 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 1.5E-56 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 Gene3D G3DSA:3.30.420.40 149 312 1.1E-125 T 13-10-2018 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 Gene3D G3DSA:3.90.640.10 181 254 1.1E-125 T 13-10-2018 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 SUPERFAMILY SSF53067 7 141 5.1E-37 T 13-10-2018 TREPR_2325 60b88e4afa4a9f3367cf0f779d6f880f 341 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 329 8.9E-159 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TREPR_3600 04425ddc9c031ea7b8d5b83164d5206f 294 Gene3D G3DSA:1.10.3130.10 27 183 3.5E-47 T 13-10-2018 TREPR_3600 04425ddc9c031ea7b8d5b83164d5206f 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 189 224 4.9E-5 T 13-10-2018 IPR001451 Hexapeptide repeat TREPR_3600 04425ddc9c031ea7b8d5b83164d5206f 294 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 238 273 1.1E-4 T 13-10-2018 IPR001451 Hexapeptide repeat TREPR_3600 04425ddc9c031ea7b8d5b83164d5206f 294 SUPERFAMILY SSF51161 105 282 1.07E-43 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily TREPR_3600 04425ddc9c031ea7b8d5b83164d5206f 294 SMART SM00971 62 154 0.0085 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 TREPR_3600 04425ddc9c031ea7b8d5b83164d5206f 294 PIRSF PIRSF000441 116 292 1.8E-54 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 TREPR_3600 04425ddc9c031ea7b8d5b83164d5206f 294 Pfam PF06426 Serine acetyltransferase, N-terminal 106 152 8.9E-6 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 TREPR_3600 04425ddc9c031ea7b8d5b83164d5206f 294 Gene3D G3DSA:2.160.10.10 184 293 5.7E-28 T 13-10-2018 TREPR_1261 d9cd2840982b53bfa16e6f0635b7a52b 443 Gene3D G3DSA:3.30.70.1230 171 379 7.2E-67 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_1261 d9cd2840982b53bfa16e6f0635b7a52b 443 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 180 355 5.7E-33 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_1261 d9cd2840982b53bfa16e6f0635b7a52b 443 SUPERFAMILY SSF55073 177 366 8.01E-56 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_1261 d9cd2840982b53bfa16e6f0635b7a52b 443 SMART SM00448 6 118 7.4E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1261 d9cd2840982b53bfa16e6f0635b7a52b 443 Gene3D G3DSA:3.40.50.2300 8 156 4.2E-34 T 13-10-2018 TREPR_1261 d9cd2840982b53bfa16e6f0635b7a52b 443 Pfam PF00072 Response regulator receiver domain 9 119 3.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1261 d9cd2840982b53bfa16e6f0635b7a52b 443 SUPERFAMILY SSF52172 9 153 1.85E-33 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1261 d9cd2840982b53bfa16e6f0635b7a52b 443 SMART SM00044 131 355 6.5E-20 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_3322 d36a8195fca61755ad7c9866ed184d05 93 SUPERFAMILY SSF143011 1 93 6.15E-16 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_3322 d36a8195fca61755ad7c9866ed184d05 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 8.1E-19 T 13-10-2018 IPR007711 Toxin HigB-1 TREPR_3322 d36a8195fca61755ad7c9866ed184d05 93 Gene3D G3DSA:3.30.2310.20 1 93 1.2E-23 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Gene3D G3DSA:3.30.450.20 195 307 2.6E-30 T 13-10-2018 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 SMART SM00448 712 843 1.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Gene3D G3DSA:3.40.50.2300 710 847 3.5E-35 T 13-10-2018 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Gene3D G3DSA:1.20.120.160 890 994 1.9E-13 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Pfam PF01627 Hpt domain 905 961 2.1E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Pfam PF00072 Response regulator receiver domain 714 781 1.7E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 459 573 2.7E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 SMART SM00387 459 575 3.9E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 SUPERFAMILY SSF52172 714 854 1.04E-28 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 SUPERFAMILY SSF103190 119 204 1.26E-9 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Gene3D G3DSA:3.30.450.20 111 194 2.6E-30 T 13-10-2018 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 SUPERFAMILY SSF47226 891 990 2.12E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Gene3D G3DSA:1.10.287.130 330 410 2.1E-21 T 13-10-2018 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 SUPERFAMILY SSF47384 334 413 1.16E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Gene3D G3DSA:3.30.565.10 411 577 8.1E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 9.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 572 9.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 553 9.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 SMART SM00388 347 412 3.3E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Pfam PF02743 Cache domain 39 297 1.6E-20 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 Pfam PF00512 His Kinase A (phospho-acceptor) domain 347 412 4.4E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1250 534fce9bc05237cf8d7454f57ffb3981 1082 SUPERFAMILY SSF55874 401 576 3.93E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2232 b359380131f73b1b829d90e747e9fd98 193 SUPERFAMILY SSF46565 104 185 6.41E-15 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_2232 b359380131f73b1b829d90e747e9fd98 193 PRINTS PR00625 DnaJ domain signature 168 188 7.1E-5 T 13-10-2018 IPR001623 DnaJ domain TREPR_2232 b359380131f73b1b829d90e747e9fd98 193 PRINTS PR00625 DnaJ domain signature 129 147 7.1E-5 T 13-10-2018 IPR001623 DnaJ domain TREPR_2232 b359380131f73b1b829d90e747e9fd98 193 PRINTS PR00625 DnaJ domain signature 147 162 7.1E-5 T 13-10-2018 IPR001623 DnaJ domain TREPR_2232 b359380131f73b1b829d90e747e9fd98 193 SMART SM00271 126 188 1.6E-9 T 13-10-2018 IPR001623 DnaJ domain TREPR_2232 b359380131f73b1b829d90e747e9fd98 193 Gene3D G3DSA:1.10.287.110 130 186 2.3E-10 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_2232 b359380131f73b1b829d90e747e9fd98 193 Pfam PF00226 DnaJ domain 132 181 6.2E-8 T 13-10-2018 IPR001623 DnaJ domain TREPR_0631 ae1974714dd2f56a50d7b685e30abfe9 144 SUPERFAMILY SSF46785 2 133 2.83E-31 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0631 ae1974714dd2f56a50d7b685e30abfe9 144 Gene3D G3DSA:1.10.10.10 1 142 4.7E-42 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0631 ae1974714dd2f56a50d7b685e30abfe9 144 Pfam PF02082 Transcriptional regulator 1 83 5.4E-24 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type TREPR_0631 ae1974714dd2f56a50d7b685e30abfe9 144 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.6E-33 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 Gene3D G3DSA:3.30.420.40 10 377 1.9E-111 T 13-10-2018 TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 Gene3D G3DSA:3.90.640.10 240 305 1.9E-111 T 13-10-2018 TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 6 382 1.4E-131 T 13-10-2018 IPR020823 Cell division protein FtsA TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 Gene3D G3DSA:3.30.1490.110 84 174 1.9E-111 T 13-10-2018 TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 PIRSF PIRSF003101 1 421 1.4E-133 T 13-10-2018 IPR020823 Cell division protein FtsA TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 SUPERFAMILY SSF53067 6 202 3.51E-51 T 13-10-2018 TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 Pfam PF14450 Cell division protein FtsA 8 187 1.6E-8 T 13-10-2018 TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 Pfam PF02491 SHS2 domain inserted in FTSA 82 167 2.5E-27 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 Gene3D G3DSA:3.30.420.40 202 357 1.9E-111 T 13-10-2018 TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 SMART SM00842 7 201 2.4E-81 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 Pfam PF14450 Cell division protein FtsA 212 379 9.0E-19 T 13-10-2018 TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 421 27.982 T 13-10-2018 IPR020823 Cell division protein FtsA TREPR_2570 7f799c7d218a3d5eee4deb1a7b1ccc02 422 SUPERFAMILY SSF53067 203 382 1.47E-41 T 13-10-2018 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 SUPERFAMILY SSF52540 2 202 3.38E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Pfam PF06421 GTP-binding protein LepA C-terminus 496 602 3.3E-45 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 PRINTS PR00315 GTP-binding elongation factor signature 129 138 2.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 PRINTS PR00315 GTP-binding elongation factor signature 93 104 2.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 PRINTS PR00315 GTP-binding elongation factor signature 77 87 2.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Gene3D G3DSA:3.30.70.870 289 370 1.3E-35 T 13-10-2018 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Pfam PF03144 Elongation factor Tu domain 2 208 278 5.4E-11 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 TIGRFAM TIGR01393 lepA: elongation factor 4 6 603 3.0E-298 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Hamap MF_00071 Elongation factor 4 [lepA]. 1 606 277.343 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Gene3D G3DSA:3.40.50.300 3 188 8.4E-69 T 13-10-2018 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 179 2.3E-20 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Pfam PF14492 Elongation Factor G, domain II 295 367 3.1E-6 T 13-10-2018 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 SUPERFAMILY SSF50447 169 291 1.41E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Gene3D G3DSA:3.30.70.2570 488 562 1.4E-28 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Pfam PF00009 Elongation factor Tu GTP binding domain 7 184 1.1E-52 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Gene3D G3DSA:3.30.70.3380 371 487 9.3E-39 T 13-10-2018 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 SUPERFAMILY SSF54980 295 373 3.31E-19 T 13-10-2018 IPR035647 EF-G domain III/V-like TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Gene3D G3DSA:2.40.30.10 189 288 1.3E-34 T 13-10-2018 TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 Pfam PF00679 Elongation factor G C-terminus 409 494 7.8E-20 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like TREPR_3399 516e52bdbb6abf565204f6564b5f4ea4 606 SUPERFAMILY SSF54980 409 502 1.77E-22 T 13-10-2018 IPR035647 EF-G domain III/V-like TREPR_0592 0ddc45b157d7c5b720c420661b496cdb 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 5 418 4.5E-94 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TREPR_0592 0ddc45b157d7c5b720c420661b496cdb 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 423 1.3E-115 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TREPR_0592 0ddc45b157d7c5b720c420661b496cdb 431 PIRSF PIRSF006066 1 429 4.4E-114 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 Gene3D G3DSA:3.40.50.1440 4 214 2.6E-78 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 ProSitePatterns PS01134 FtsZ protein signature 1. 38 72 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 PRINTS PR00423 Cell division protein FtsZ signature 183 205 2.6E-48 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 PRINTS PR00423 Cell division protein FtsZ signature 92 112 2.6E-48 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 PRINTS PR00423 Cell division protein FtsZ signature 206 227 2.6E-48 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 PRINTS PR00423 Cell division protein FtsZ signature 120 141 2.6E-48 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 SMART SM00864 7 199 6.4E-108 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 ProSitePatterns PS01135 FtsZ protein signature 2. 91 112 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 SMART SM00865 201 319 1.6E-41 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 8 167 1.5E-40 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 SUPERFAMILY SSF52490 8 202 3.01E-67 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 Pfam PF12327 FtsZ family, C-terminal domain 216 310 2.5E-26 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 3 335 36.065 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 SUPERFAMILY SSF55307 198 314 4.58E-36 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 6 325 5.1E-124 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TREPR_2569 df536f401d0182c6966a5622e8c56b0c 403 Gene3D G3DSA:3.30.1330.20 215 324 6.7E-34 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 TREPR_0352 ba52a8867b501db76c05da1cf2fe1b7b 253 Gene3D G3DSA:3.40.50.720 3 250 1.0E-28 T 13-10-2018 TREPR_0352 ba52a8867b501db76c05da1cf2fe1b7b 253 SUPERFAMILY SSF51735 9 223 3.85E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0352 ba52a8867b501db76c05da1cf2fe1b7b 253 Pfam PF04321 RmlD substrate binding domain 27 127 4.6E-11 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 Gene3D G3DSA:2.60.34.10 378 517 2.3E-63 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 PRINTS PR00301 70kDa heat shock protein signature 135 155 2.0E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.0E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 PRINTS PR00301 70kDa heat shock protein signature 382 401 2.0E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.0E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 PRINTS PR00301 70kDa heat shock protein signature 196 206 2.0E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 PRINTS PR00301 70kDa heat shock protein signature 463 479 2.0E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 PRINTS PR00301 70kDa heat shock protein signature 328 344 2.0E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.0E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 PRINTS PR00301 70kDa heat shock protein signature 359 379 2.0E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 Gene3D G3DSA:3.30.420.40 177 360 9.7E-157 T 13-10-2018 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 SUPERFAMILY SSF53067 184 376 6.17E-68 T 13-10-2018 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 Gene3D G3DSA:3.90.640.10 223 310 9.7E-157 T 13-10-2018 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 643 38.034 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 SUPERFAMILY SSF100934 501 600 1.22E-18 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 SUPERFAMILY SSF53067 1 180 8.42E-62 T 13-10-2018 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 Pfam PF00012 Hsp70 protein 4 597 6.1E-267 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 597 0.0 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 SUPERFAMILY SSF100920 378 534 2.22E-60 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 Gene3D G3DSA:1.20.1270.10 518 601 6.9E-25 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TREPR_0312 e8f0e35037074825fb5147f847d759ad 647 Gene3D G3DSA:3.30.420.40 5 373 9.7E-157 T 13-10-2018 TREPR_1222 7e90eef2e17d758c04b13448ac7bc649 167 SMART SM00530 11 66 3.9E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1222 7e90eef2e17d758c04b13448ac7bc649 167 Pfam PF01381 Helix-turn-helix 17 66 1.9E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1222 7e90eef2e17d758c04b13448ac7bc649 167 SUPERFAMILY SSF47413 8 81 1.21E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1222 7e90eef2e17d758c04b13448ac7bc649 167 Gene3D G3DSA:1.10.260.40 3 109 1.3E-18 T 13-10-2018 TREPR_1222 7e90eef2e17d758c04b13448ac7bc649 167 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 79 7.2E-15 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TREPR_3059 b54367935a7764e07b59570d80af355e 606 SUPERFAMILY SSF58104 270 605 1.27E-58 T 13-10-2018 TREPR_3059 b54367935a7764e07b59570d80af355e 606 Gene3D G3DSA:1.10.8.500 249 300 3.9E-11 T 13-10-2018 TREPR_3059 b54367935a7764e07b59570d80af355e 606 Gene3D G3DSA:3.30.450.20 50 225 1.5E-29 T 13-10-2018 TREPR_3059 b54367935a7764e07b59570d80af355e 606 Gene3D G3DSA:1.10.287.950 321 606 6.9E-57 T 13-10-2018 TREPR_3059 b54367935a7764e07b59570d80af355e 606 Pfam PF17200 Single Cache domain 2 74 213 4.7E-20 T 13-10-2018 IPR033480 Single Cache domain 2 TREPR_3059 b54367935a7764e07b59570d80af355e 606 SMART SM01049 61 152 5.7E-7 T 13-10-2018 IPR033480 Single Cache domain 2 TREPR_3059 b54367935a7764e07b59570d80af355e 606 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 424 572 8.9E-36 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_3059 b54367935a7764e07b59570d80af355e 606 SMART SM00283 344 605 1.3E-68 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_3059 b54367935a7764e07b59570d80af355e 606 Pfam PF00672 HAMP domain 249 297 4.0E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_3059 b54367935a7764e07b59570d80af355e 606 SMART SM00304 249 301 9.9E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 SUPERFAMILY SSF46548 11 71 2.46E-5 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 Gene3D G3DSA:1.10.1060.10 4 100 1.0E-8 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 Pfam PF01180 Dihydroorotate dehydrogenase 101 398 4.8E-29 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 SUPERFAMILY SSF54862 225 492 4.08E-22 T 13-10-2018 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 SUPERFAMILY SSF51395 93 412 1.1E-60 T 13-10-2018 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 Pfam PF14697 4Fe-4S dicluster domain 432 487 6.6E-17 T 13-10-2018 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 Gene3D G3DSA:3.30.70.20 412 500 1.0E-19 T 13-10-2018 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 11 86 4.3E-6 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 472 483 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 100 412 3.0E-54 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TREPR_0425 aa8f8f470e21d63f88cc296a3fc21cc5 500 Gene3D G3DSA:3.20.20.70 101 404 2.2E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3616 128fc99185f5a478dfb54a3ed13e378b 346 Gene3D G3DSA:1.10.3470.10 11 344 1.3E-101 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_3616 128fc99185f5a478dfb54a3ed13e378b 346 Pfam PF01032 FecCD transport family 24 338 9.8E-82 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TREPR_3616 128fc99185f5a478dfb54a3ed13e378b 346 SUPERFAMILY SSF81345 9 338 1.31E-72 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_2131 c89ce0595cfdca33e181c398c37ed8df 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 438 6.1E-69 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_2131 c89ce0595cfdca33e181c398c37ed8df 521 Gene3D G3DSA:3.40.190.10 44 494 2.1E-113 T 13-10-2018 TREPR_2131 c89ce0595cfdca33e181c398c37ed8df 521 Gene3D G3DSA:3.90.76.10 70 189 2.1E-113 T 13-10-2018 TREPR_2131 c89ce0595cfdca33e181c398c37ed8df 521 Gene3D G3DSA:3.10.105.10 280 487 2.1E-113 T 13-10-2018 TREPR_2131 c89ce0595cfdca33e181c398c37ed8df 521 SUPERFAMILY SSF53850 34 506 2.35E-101 T 13-10-2018 TREPR_2131 c89ce0595cfdca33e181c398c37ed8df 521 PIRSF PIRSF002741 1 519 2.1E-86 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 14 549 8.9E-192 T 13-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 SUPERFAMILY SSF110921 426 538 1.57E-19 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 Gene3D G3DSA:3.20.20.70 13 336 5.5E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 SUPERFAMILY SSF51569 13 303 5.13E-80 T 13-10-2018 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 213 226 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 Gene3D G3DSA:3.30.160.270 396 540 2.4E-6 T 13-10-2018 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 SMART SM00917 385 542 1.3E-33 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 Pfam PF08502 LeuA allosteric (dimerisation) domain 386 541 1.2E-24 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 21 37 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_0980 1b712c60e3fc3700e00a9e6434d7b957 553 Pfam PF00682 HMGL-like 14 264 1.2E-46 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 SUPERFAMILY SSF47446 335 436 2.94E-33 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 SMART SM00382 108 255 9.2E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 SMART SM00963 1 86 1.4E-27 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 Gene3D G3DSA:3.40.50.300 99 293 1.8E-117 T 13-10-2018 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 Pfam PF00448 SRP54-type protein, GTPase domain 110 304 1.6E-71 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 Gene3D G3DSA:1.20.120.140 4 314 1.8E-117 T 13-10-2018 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 277 290 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 Pfam PF02978 Signal peptide binding domain 335 432 4.5E-31 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.4E-17 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 SUPERFAMILY SSF52540 42 361 3.72E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 453 31.908 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 Gene3D G3DSA:1.10.260.30 317 454 9.2E-39 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 SMART SM00962 109 304 6.5E-103 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TREPR_0615 74ee35fa7fdd0ef334a42536d8fa327b 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 434 2.2E-171 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 SUPERFAMILY SSF103642 398 417 1.55E-6 T 13-10-2018 TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 Gene3D G3DSA:3.10.450.50 373 417 8.6E-7 T 13-10-2018 TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 170 388 1.0E-16 T 13-10-2018 TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 Gene3D G3DSA:3.20.20.70 5 372 6.7E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 Pfam PF13186 Iron-sulfur cluster-binding domain 265 325 9.1E-6 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 Pfam PF02810 SEC-C motif 400 418 4.1E-8 T 13-10-2018 IPR004027 SEC-C motif TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 264 346 3.6E-17 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 9 371 5.4E-119 T 13-10-2018 TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 Pfam PF04055 Radical SAM superfamily 14 166 6.3E-10 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_2876 b2f06cf4d1e2355a523cb81c2ccb2e74 421 SUPERFAMILY SSF102114 14 334 2.09E-35 T 13-10-2018 TREPR_3133 178bda11ac9f56274b1f86ebecbfd53e 467 Pfam PF08245 Mur ligase middle domain 57 299 1.7E-9 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TREPR_3133 178bda11ac9f56274b1f86ebecbfd53e 467 SUPERFAMILY SSF53623 14 319 4.45E-67 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_3133 178bda11ac9f56274b1f86ebecbfd53e 467 TIGRFAM TIGR01499 folC: bifunctional protein FolC 36 464 4.7E-90 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TREPR_3133 178bda11ac9f56274b1f86ebecbfd53e 467 SUPERFAMILY SSF53244 322 465 1.88E-18 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_3133 178bda11ac9f56274b1f86ebecbfd53e 467 Gene3D G3DSA:3.40.1190.10 3 321 1.5E-74 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_3133 178bda11ac9f56274b1f86ebecbfd53e 467 Gene3D G3DSA:3.90.190.20 325 467 1.4E-23 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_3133 178bda11ac9f56274b1f86ebecbfd53e 467 PIRSF PIRSF001563 9 467 5.2E-86 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 SUPERFAMILY SSF82866 291 488 2.35E-36 T 13-10-2018 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 Gene3D G3DSA:3.30.2090.10 711 798 3.9E-271 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.1E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 2.1E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.1E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.1E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.1E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.1E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 SUPERFAMILY SSF82693 135 323 9.68E-16 T 13-10-2018 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 Gene3D G3DSA:3.30.70.1430 40 806 3.9E-271 T 13-10-2018 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 Gene3D G3DSA:3.30.70.1320 134 325 3.9E-271 T 13-10-2018 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 Pfam PF00873 AcrB/AcrD/AcrF family 3 1017 3.4E-219 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 SUPERFAMILY SSF82866 796 1023 6.93E-52 T 13-10-2018 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 Gene3D G3DSA:1.20.1640.10 10 512 3.9E-271 T 13-10-2018 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 Gene3D G3DSA:1.20.1640.10 513 1014 3.9E-271 T 13-10-2018 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 Gene3D G3DSA:3.30.70.1430 568 660 3.9E-271 T 13-10-2018 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 Gene3D G3DSA:3.30.2090.10 177 268 3.9E-271 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 SUPERFAMILY SSF82714 712 785 4.19E-9 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 SUPERFAMILY SSF82714 181 264 3.14E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 SUPERFAMILY SSF82693 40 134 2.75E-19 T 13-10-2018 TREPR_3613 6fb441ce3d04b5dcb09cd0e062ffee6a 1055 Gene3D G3DSA:3.30.70.1440 661 857 3.9E-271 T 13-10-2018 TREPR_2488 e183f792cbaf41492726a03028e15255 349 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 1.9E-16 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TREPR_2488 e183f792cbaf41492726a03028e15255 349 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 176 188 1.9E-16 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TREPR_2488 e183f792cbaf41492726a03028e15255 349 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 302 321 1.9E-16 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TREPR_2488 e183f792cbaf41492726a03028e15255 349 SUPERFAMILY SSF51306 79 348 4.18E-40 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TREPR_2488 e183f792cbaf41492726a03028e15255 349 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 63 197 7.6E-15 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TREPR_2488 e183f792cbaf41492726a03028e15255 349 Gene3D G3DSA:2.10.109.10 256 347 9.1E-14 T 13-10-2018 TREPR_2488 e183f792cbaf41492726a03028e15255 349 Pfam PF10502 Signal peptidase, peptidase S26 293 335 1.8E-5 T 13-10-2018 IPR019533 Peptidase S26 TREPR_2488 e183f792cbaf41492726a03028e15255 349 Gene3D G3DSA:2.10.109.10 76 199 6.5E-15 T 13-10-2018 TREPR_2488 e183f792cbaf41492726a03028e15255 349 Pfam PF00717 Peptidase S24-like 86 137 4.1E-6 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TREPR_0476 92711eb8affad0f1c2d232439e92e938 276 Pfam PF00005 ABC transporter 37 187 3.5E-37 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0476 92711eb8affad0f1c2d232439e92e938 276 SMART SM00382 45 236 4.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0476 92711eb8affad0f1c2d232439e92e938 276 SUPERFAMILY SSF52540 10 259 6.23E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0476 92711eb8affad0f1c2d232439e92e938 276 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0476 92711eb8affad0f1c2d232439e92e938 276 Gene3D G3DSA:3.40.50.300 7 275 1.3E-87 T 13-10-2018 TREPR_1964 ceceb0065841d57a6cb2e3b4081e0f21 270 Gene3D G3DSA:1.10.1660.10 2 123 1.5E-17 T 13-10-2018 TREPR_1964 ceceb0065841d57a6cb2e3b4081e0f21 270 Pfam PF13411 MerR HTH family regulatory protein 4 69 3.1E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TREPR_1964 ceceb0065841d57a6cb2e3b4081e0f21 270 SUPERFAMILY SSF46955 4 111 3.0E-16 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily TREPR_1964 ceceb0065841d57a6cb2e3b4081e0f21 270 SMART SM00422 3 71 1.4E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TREPR_3321 38cf2d95ba610ff7fde0504030578816 100 Gene3D G3DSA:1.10.260.40 4 99 1.1E-23 T 13-10-2018 TREPR_3321 38cf2d95ba610ff7fde0504030578816 100 SMART SM00530 14 69 3.0E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3321 38cf2d95ba610ff7fde0504030578816 100 Pfam PF01381 Helix-turn-helix 19 68 4.6E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3321 38cf2d95ba610ff7fde0504030578816 100 SUPERFAMILY SSF47413 11 93 1.21E-22 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3321 38cf2d95ba610ff7fde0504030578816 100 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 82 1.7E-24 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TREPR_3082 b4d7730ee14d7d65ec80b9fa6db3e53f 397 Gene3D G3DSA:3.90.1150.10 2 15 7.6E-49 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3082 b4d7730ee14d7d65ec80b9fa6db3e53f 397 Gene3D G3DSA:3.90.1150.10 288 390 1.0E-37 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3082 b4d7730ee14d7d65ec80b9fa6db3e53f 397 Pfam PF00266 Aminotransferase class-V 2 189 4.6E-37 T 13-10-2018 IPR000192 Aminotransferase class V domain TREPR_3082 b4d7730ee14d7d65ec80b9fa6db3e53f 397 Pfam PF00266 Aminotransferase class-V 193 388 3.3E-26 T 13-10-2018 IPR000192 Aminotransferase class V domain TREPR_3082 b4d7730ee14d7d65ec80b9fa6db3e53f 397 Gene3D G3DSA:3.40.640.10 196 287 1.0E-37 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3082 b4d7730ee14d7d65ec80b9fa6db3e53f 397 Gene3D G3DSA:3.40.640.10 16 189 7.6E-49 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3082 b4d7730ee14d7d65ec80b9fa6db3e53f 397 SUPERFAMILY SSF53383 1 395 1.37E-81 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_1124 8ea69827468a068e2f991cce991dd528 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 293 1.3E-41 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_3718 968f4e7b9f20752877cc2f2913eb2dfe 625 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 227 620 7.4E-162 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TREPR_3718 968f4e7b9f20752877cc2f2913eb2dfe 625 SUPERFAMILY SSF53383 225 622 1.99E-116 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3718 968f4e7b9f20752877cc2f2913eb2dfe 625 Gene3D G3DSA:3.40.640.10 256 516 2.7E-162 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3718 968f4e7b9f20752877cc2f2913eb2dfe 625 Pfam PF00266 Aminotransferase class-V 245 614 3.9E-139 T 13-10-2018 IPR000192 Aminotransferase class V domain TREPR_3718 968f4e7b9f20752877cc2f2913eb2dfe 625 Gene3D G3DSA:3.90.1150.10 228 618 2.7E-162 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 Pfam PF03727 Hexokinase 224 449 8.3E-37 T 13-10-2018 IPR022673 Hexokinase, C-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 Gene3D G3DSA:3.30.420.40 55 447 1.8E-76 T 13-10-2018 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 Gene3D G3DSA:3.40.367.20 36 441 1.8E-76 T 13-10-2018 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 PRINTS PR00475 Hexokinase family signature 360 382 3.6E-24 T 13-10-2018 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 PRINTS PR00475 Hexokinase family signature 133 158 3.6E-24 T 13-10-2018 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 PRINTS PR00475 Hexokinase family signature 224 238 3.6E-24 T 13-10-2018 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 PRINTS PR00475 Hexokinase family signature 434 450 3.6E-24 T 13-10-2018 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 PRINTS PR00475 Hexokinase family signature 284 306 3.6E-24 T 13-10-2018 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 PRINTS PR00475 Hexokinase family signature 68 84 3.6E-24 T 13-10-2018 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 SUPERFAMILY SSF53067 19 199 5.98E-35 T 13-10-2018 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 Pfam PF00349 Hexokinase 28 198 2.4E-27 T 13-10-2018 IPR022672 Hexokinase, N-terminal GO:0005524|GO:0005975|GO:0016773 KEGG: 00010+2.7.1.1|KEGG: 00051+2.7.1.1|KEGG: 00052+2.7.1.1|KEGG: 00500+2.7.1.1|KEGG: 00520+2.7.1.1|KEGG: 00521+2.7.1.1|KEGG: 00524+2.7.1.1|Reactome: R-HSA-70171 TREPR_1339 3d1cdb858f70ba3d1bc4cffeb53e33f9 451 SUPERFAMILY SSF53067 223 449 1.62E-30 T 13-10-2018 TREPR_2242 30ab5ceb7a31f4d37e701e9779d3225b 297 Hamap MF_00258 Glutamate racemase [murI]. 4 261 29.6 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TREPR_2242 30ab5ceb7a31f4d37e701e9779d3225b 297 SUPERFAMILY SSF53681 111 229 9.97E-23 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TREPR_2242 30ab5ceb7a31f4d37e701e9779d3225b 297 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 71 79 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TREPR_2242 30ab5ceb7a31f4d37e701e9779d3225b 297 Gene3D G3DSA:3.40.50.1860 9 229 5.0E-63 T 13-10-2018 TREPR_2242 30ab5ceb7a31f4d37e701e9779d3225b 297 Gene3D G3DSA:3.40.50.1860 97 210 5.0E-63 T 13-10-2018 TREPR_2242 30ab5ceb7a31f4d37e701e9779d3225b 297 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 226 1.9E-51 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TREPR_2242 30ab5ceb7a31f4d37e701e9779d3225b 297 SUPERFAMILY SSF53681 5 108 1.96E-23 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TREPR_2242 30ab5ceb7a31f4d37e701e9779d3225b 297 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 203 9.6E-20 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 ProSitePatterns PS01229 Hypothetical cof family signature 2. 585 607 - T 13-10-2018 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 Gene3D G3DSA:3.40.50.1000 364 635 4.3E-75 T 13-10-2018 IPR023214 HAD superfamily TREPR_3537 107a36aab8022681396f92d862a8f50d 694 SUPERFAMILY SSF81653 197 291 1.06E-24 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 Gene3D G3DSA:3.40.1110.10 394 516 4.3E-75 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 585 601 2.1E-7 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 616 641 2.1E-7 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 142 686 1.7E-148 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 165 664 7.0E-64 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 Gene3D G3DSA:2.70.150.20 186 295 3.7E-30 T 13-10-2018 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 385 391 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 Pfam PF00702 haloacid dehalogenase-like hydrolase 379 599 6.0E-35 T 13-10-2018 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 Pfam PF00122 E1-E2 ATPase 195 360 7.3E-38 T 13-10-2018 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 SUPERFAMILY SSF56784 381 685 1.6E-41 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_3537 107a36aab8022681396f92d862a8f50d 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 241 255 2.5E-20 T 13-10-2018 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 383 397 2.5E-20 T 13-10-2018 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 608 620 2.5E-20 T 13-10-2018 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 585 604 2.5E-20 T 13-10-2018 TREPR_3537 107a36aab8022681396f92d862a8f50d 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 520 2.5E-20 T 13-10-2018 TREPR_0422 be00ab7d17f6eb3e96dae6afd920b8c9 370 SUPERFAMILY SSF56796 2 367 2.22E-91 T 13-10-2018 TREPR_0422 be00ab7d17f6eb3e96dae6afd920b8c9 370 Gene3D G3DSA:3.40.50.1970 1 180 3.2E-52 T 13-10-2018 TREPR_0422 be00ab7d17f6eb3e96dae6afd920b8c9 370 Gene3D G3DSA:1.20.1090.10 182 370 4.7E-37 T 13-10-2018 TREPR_0422 be00ab7d17f6eb3e96dae6afd920b8c9 370 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 357 9.3E-88 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 TREPR_2435 cf74b5e373914931083662f09b428ec1 879 Pfam PF05226 CHASE2 domain 6 495 2.0E-25 T 13-10-2018 IPR007890 CHASE2 TREPR_2435 cf74b5e373914931083662f09b428ec1 879 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 596 796 7.0E-29 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_2435 cf74b5e373914931083662f09b428ec1 879 Gene3D G3DSA:3.30.70.1230 591 808 1.9E-61 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_2435 cf74b5e373914931083662f09b428ec1 879 SMART SM01080 1 502 1.4E-4 T 13-10-2018 IPR007890 CHASE2 TREPR_2435 cf74b5e373914931083662f09b428ec1 879 SUPERFAMILY SSF55073 592 802 1.88E-51 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_2435 cf74b5e373914931083662f09b428ec1 879 SMART SM00044 558 791 1.2E-6 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_0490 05806205b4b3082d095801fca428a632 357 SUPERFAMILY SSF144083 292 354 1.57E-21 T 13-10-2018 TREPR_0490 05806205b4b3082d095801fca428a632 357 Gene3D G3DSA:1.20.58.340 280 357 6.1E-34 T 13-10-2018 TREPR_0490 05806205b4b3082d095801fca428a632 357 Gene3D G3DSA:1.20.58.340 167 279 3.6E-32 T 13-10-2018 TREPR_0490 05806205b4b3082d095801fca428a632 357 Pfam PF01544 CorA-like Mg2+ transporter protein 64 353 3.6E-71 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 TREPR_0490 05806205b4b3082d095801fca428a632 357 Gene3D G3DSA:3.30.460.20 10 166 5.2E-43 T 13-10-2018 TREPR_0490 05806205b4b3082d095801fca428a632 357 SUPERFAMILY SSF143865 16 291 1.29E-71 T 13-10-2018 TREPR_0490 05806205b4b3082d095801fca428a632 357 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 61 357 3.4E-87 T 13-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 TREPR_0357 9b87af06a460cdec62cb2c86c9c43da7 519 PIRSF PIRSF500217 1 519 7.2E-142 T 13-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 TREPR_0357 9b87af06a460cdec62cb2c86c9c43da7 519 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 168 384 4.0E-30 T 13-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT TREPR_0357 9b87af06a460cdec62cb2c86c9c43da7 519 PIRSF PIRSF016636 1 519 1.7E-140 T 13-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB TREPR_2134 a113a6e481be41a910641f4937cc1a22 498 SUPERFAMILY SSF50998 21 383 7.46E-6 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TREPR_2134 a113a6e481be41a910641f4937cc1a22 498 Pfam PF05935 Arylsulfotransferase (ASST) 121 378 9.6E-18 T 13-10-2018 IPR010262 Arylsulfotransferase, bacteria GO:0004062 TREPR_2467 a3d554e4df04d892b10ce4c019fb8d5d 77 SUPERFAMILY SSF116842 3 61 1.11E-14 T 13-10-2018 TREPR_2467 a3d554e4df04d892b10ce4c019fb8d5d 77 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 2 44 0.008 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TREPR_2467 a3d554e4df04d892b10ce4c019fb8d5d 77 PIRSF PIRSF006488 1 72 1.0E-18 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TREPR_2467 a3d554e4df04d892b10ce4c019fb8d5d 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 3 63 12.634 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TREPR_2467 a3d554e4df04d892b10ce4c019fb8d5d 77 Gene3D G3DSA:1.10.287.1040 1 71 2.0E-16 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 TREPR_2467 a3d554e4df04d892b10ce4c019fb8d5d 77 Pfam PF02609 Exonuclease VII small subunit 4 55 1.2E-15 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TREPR_2467 a3d554e4df04d892b10ce4c019fb8d5d 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 3 58 3.4E-17 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TREPR_1031 868d54140fbe0626ab6b7ef593bfa790 384 SUPERFAMILY SSF89260 269 380 1.44E-11 T 13-10-2018 TREPR_1031 868d54140fbe0626ab6b7ef593bfa790 384 SUPERFAMILY SSF89260 154 257 1.31E-6 T 13-10-2018 TREPR_1031 868d54140fbe0626ab6b7ef593bfa790 384 SUPERFAMILY SSF89260 53 136 2.88E-6 T 13-10-2018 TREPR_1031 868d54140fbe0626ab6b7ef593bfa790 384 Gene3D G3DSA:2.60.120.380 265 382 2.6E-24 T 13-10-2018 TREPR_1031 868d54140fbe0626ab6b7ef593bfa790 384 Gene3D G3DSA:2.60.120.380 150 261 5.9E-20 T 13-10-2018 TREPR_1031 868d54140fbe0626ab6b7ef593bfa790 384 Gene3D G3DSA:2.60.120.380 35 146 3.0E-15 T 13-10-2018 TREPR_0710 a5e9ee60f76379fbdf302169a7c49fc2 355 Gene3D G3DSA:3.40.640.10 18 189 1.9E-7 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0710 a5e9ee60f76379fbdf302169a7c49fc2 355 SUPERFAMILY SSF53383 20 353 2.96E-13 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0710 a5e9ee60f76379fbdf302169a7c49fc2 355 Gene3D G3DSA:3.90.1150.10 243 355 5.3E-7 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0533 596bb28f925ed3d6ff5d27838637ed39 270 SUPERFAMILY SSF52540 3 240 3.85E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0533 596bb28f925ed3d6ff5d27838637ed39 270 Pfam PF00005 ABC transporter 20 157 4.9E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0533 596bb28f925ed3d6ff5d27838637ed39 270 Gene3D G3DSA:3.40.50.300 3 258 1.8E-65 T 13-10-2018 TREPR_0533 596bb28f925ed3d6ff5d27838637ed39 270 SMART SM00382 29 227 1.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0533 596bb28f925ed3d6ff5d27838637ed39 270 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 SUPERFAMILY SSF48029 132 342 1.22E-69 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 Pfam PF14842 FliG N-terminal domain 23 125 1.7E-34 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 Gene3D G3DSA:1.10.220.30 17 104 6.3E-19 T 13-10-2018 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 Pfam PF14841 FliG middle domain 133 207 1.3E-31 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 Gene3D G3DSA:1.10.220.30 121 212 2.1E-35 T 13-10-2018 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 Gene3D G3DSA:1.10.220.30 213 352 7.3E-51 T 13-10-2018 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 PIRSF PIRSF003161 17 352 1.3E-120 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 17 351 6.5E-150 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 Pfam PF01706 FliG C-terminal domain 235 341 4.2E-44 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 213 238 1.1E-84 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 290 316 1.1E-84 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 52 78 1.1E-84 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 1.1E-84 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 23 39 1.1E-84 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 132 155 1.1E-84 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 PRINTS PR00954 Flagellar motor switch protein FliG signature 266 286 1.1E-84 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_2557 c2be745d3a81225922e026d43d8fe8c8 352 SUPERFAMILY SSF48029 24 131 2.54E-21 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TREPR_0195 0e81cc8f45f5ba0e48220b71eeee1707 367 SUPERFAMILY SSF53756 5 335 5.76E-37 T 13-10-2018 TREPR_0195 0e81cc8f45f5ba0e48220b71eeee1707 367 Pfam PF00534 Glycosyl transferases group 1 194 332 1.8E-16 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_0195 0e81cc8f45f5ba0e48220b71eeee1707 367 Gene3D G3DSA:3.40.50.2000 179 344 2.0E-23 T 13-10-2018 TREPR_3401 e0e915d1768566fb765d113f26b034a1 1014 SUPERFAMILY SSF69304 332 581 5.75E-8 T 13-10-2018 TREPR_3139 14f7cd3636e348adce01de9f7fd65e56 519 PIRSF PIRSF002741 3 506 1.7E-69 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_3139 14f7cd3636e348adce01de9f7fd65e56 519 Gene3D G3DSA:3.40.190.10 34 489 6.0E-106 T 13-10-2018 TREPR_3139 14f7cd3636e348adce01de9f7fd65e56 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 428 3.5E-64 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_3139 14f7cd3636e348adce01de9f7fd65e56 519 SUPERFAMILY SSF53850 21 506 3.1E-94 T 13-10-2018 TREPR_3139 14f7cd3636e348adce01de9f7fd65e56 519 Gene3D G3DSA:3.90.76.10 53 184 6.0E-106 T 13-10-2018 TREPR_3139 14f7cd3636e348adce01de9f7fd65e56 519 Gene3D G3DSA:3.10.105.10 272 475 6.0E-106 T 13-10-2018 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 6.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 6.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 PRINTS PR00996 Glutamate methyltransferase family signature 68 80 6.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 PRINTS PR00996 Glutamate methyltransferase family signature 110 130 6.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 6.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 6.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 266 1.7E-65 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 Gene3D G3DSA:3.40.50.150 74 272 2.9E-62 T 13-10-2018 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 SMART SM00138 9 271 1.3E-95 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 SUPERFAMILY SSF53335 75 266 6.27E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 SUPERFAMILY SSF47757 3 74 7.85E-12 T 13-10-2018 TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 PIRSF PIRSF000410 2 272 6.9E-76 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 61 4.1E-8 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TREPR_3013 e96fb010823f110669f7ae42af0e1cec 273 Gene3D G3DSA:1.10.155.10 1 73 5.3E-12 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily TREPR_1671 725687c19ef00369c0e926ee5c2089ab 334 Pfam PF01032 FecCD transport family 15 328 4.8E-87 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TREPR_1671 725687c19ef00369c0e926ee5c2089ab 334 SUPERFAMILY SSF81345 4 329 7.72E-76 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_1671 725687c19ef00369c0e926ee5c2089ab 334 Gene3D G3DSA:1.10.3470.10 2 333 3.6E-101 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_1628 d9d2ac4186b5145472c0394d346d392a 327 Gene3D G3DSA:3.90.550.10 1 319 7.9E-89 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1628 d9d2ac4186b5145472c0394d346d392a 327 SUPERFAMILY SSF53448 33 276 6.0E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1628 d9d2ac4186b5145472c0394d346d392a 327 Pfam PF00535 Glycosyl transferase family 2 36 156 2.2E-9 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 SUPERFAMILY SSF46785 5 73 7.38E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 SUPERFAMILY SSF53850 86 292 8.82E-17 T 13-10-2018 TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 Pfam PF03466 LysR substrate binding domain 89 277 1.8E-14 T 13-10-2018 IPR005119 LysR, substrate-binding TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 Gene3D G3DSA:3.40.190.10 166 265 9.0E-16 T 13-10-2018 TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 Gene3D G3DSA:1.10.10.10 1 69 1.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 Gene3D G3DSA:3.40.190.10 94 283 9.0E-16 T 13-10-2018 TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_1561 abac52190f374d75a0bf2d5eb24cbf97 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_1138 6620c975bf0c09708e80d65d654b4603 581 SUPERFAMILY SSF56954 11 296 2.56E-5 T 13-10-2018 TREPR_1138 6620c975bf0c09708e80d65d654b4603 581 Gene3D G3DSA:1.20.1270.90 42 126 1.0E-10 T 13-10-2018 TREPR_1138 6620c975bf0c09708e80d65d654b4603 581 Gene3D G3DSA:1.20.1270.90 393 479 9.9E-10 T 13-10-2018 TREPR_1138 6620c975bf0c09708e80d65d654b4603 581 Gene3D G3DSA:1.20.1270.90 131 217 1.5E-11 T 13-10-2018 TREPR_1138 6620c975bf0c09708e80d65d654b4603 581 Pfam PF07554 FIVAR domain 78 119 9.2E-5 T 13-10-2018 TREPR_1138 6620c975bf0c09708e80d65d654b4603 581 Pfam PF07554 FIVAR domain 167 207 0.0013 T 13-10-2018 TREPR_2380 f6ef3daa499ba38d1d421c106a787697 298 Gene3D G3DSA:3.90.550.10 2 225 2.8E-38 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2380 f6ef3daa499ba38d1d421c106a787697 298 Pfam PF00535 Glycosyl transferase family 2 5 170 6.5E-20 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_2380 f6ef3daa499ba38d1d421c106a787697 298 SUPERFAMILY SSF53448 3 259 6.13E-43 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1979 2fd4f387e91dbefb724d1c3ea3852671 360 SUPERFAMILY SSF56219 48 345 7.2E-20 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_1979 2fd4f387e91dbefb724d1c3ea3852671 360 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 62 273 7.7E-6 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TREPR_0035 38e99aa1ac30ba4744806045e3a7b3f5 376 SUPERFAMILY SSF100950 5 362 3.52E-105 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_0035 38e99aa1ac30ba4744806045e3a7b3f5 376 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 11 369 33.657 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TREPR_0035 38e99aa1ac30ba4744806045e3a7b3f5 376 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 43 358 2.1E-91 T 13-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TREPR_0035 38e99aa1ac30ba4744806045e3a7b3f5 376 Gene3D G3DSA:1.20.120.1840 12 199 1.5E-47 T 13-10-2018 TREPR_0035 38e99aa1ac30ba4744806045e3a7b3f5 376 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 19 359 7.7E-117 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TREPR_0035 38e99aa1ac30ba4744806045e3a7b3f5 376 Gene3D G3DSA:3.40.50.10470 200 368 3.5E-47 T 13-10-2018 TREPR_0035 38e99aa1ac30ba4744806045e3a7b3f5 376 Pfam PF01008 Initiation factor 2 subunit family 57 358 2.7E-58 T 13-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 TREPR_0633 4f2635fe07e460855c2dce2753f06001 420 Gene3D G3DSA:3.40.50.2000 2 215 2.9E-66 T 13-10-2018 TREPR_0633 4f2635fe07e460855c2dce2753f06001 420 SUPERFAMILY SSF53756 1 404 1.28E-65 T 13-10-2018 TREPR_0633 4f2635fe07e460855c2dce2753f06001 420 Gene3D G3DSA:3.40.50.2000 216 392 2.9E-66 T 13-10-2018 TREPR_1224 2a1679d4ffa84258c6d80391ed4d9ad7 334 Pfam PF13353 4Fe-4S single cluster domain 17 109 5.4E-8 T 13-10-2018 TREPR_1224 2a1679d4ffa84258c6d80391ed4d9ad7 334 SUPERFAMILY SSF102114 2 279 1.2E-63 T 13-10-2018 TREPR_1224 2a1679d4ffa84258c6d80391ed4d9ad7 334 SMART SM00729 10 218 4.9E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_1224 2a1679d4ffa84258c6d80391ed4d9ad7 334 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1224 2a1679d4ffa84258c6d80391ed4d9ad7 334 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 1 334 35.494 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1224 2a1679d4ffa84258c6d80391ed4d9ad7 334 Pfam PF06463 Molybdenum Cofactor Synthesis C 190 313 5.4E-30 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1224 2a1679d4ffa84258c6d80391ed4d9ad7 334 Gene3D G3DSA:3.20.20.70 1 334 1.4E-85 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1224 2a1679d4ffa84258c6d80391ed4d9ad7 334 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 334 6.2E-98 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1224 2a1679d4ffa84258c6d80391ed4d9ad7 334 Pfam PF04055 Radical SAM superfamily 14 182 9.7E-24 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_1454 1d1e7fe575a0124d4a62ab13b46c08a3 231 Gene3D G3DSA:3.40.50.300 1 230 1.5E-65 T 13-10-2018 TREPR_1454 1d1e7fe575a0124d4a62ab13b46c08a3 231 SMART SM00382 28 214 3.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1454 1d1e7fe575a0124d4a62ab13b46c08a3 231 Pfam PF00005 ABC transporter 19 164 6.6E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1454 1d1e7fe575a0124d4a62ab13b46c08a3 231 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1454 1d1e7fe575a0124d4a62ab13b46c08a3 231 SUPERFAMILY SSF52540 3 223 4.21E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 5.5E-37 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 5.5E-37 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.5E-37 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.5E-37 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 5.5E-37 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 5.5E-37 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.5E-37 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 SUPERFAMILY SSF82693 137 323 3.35E-8 T 13-10-2018 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 Gene3D G3DSA:3.30.70.1430 40 809 1.5E-269 T 13-10-2018 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 Gene3D G3DSA:3.30.70.1440 659 858 1.5E-269 T 13-10-2018 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 Gene3D G3DSA:3.30.70.1320 133 325 1.5E-269 T 13-10-2018 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 Pfam PF00873 AcrB/AcrD/AcrF family 3 1019 1.2E-217 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 Gene3D G3DSA:3.30.2090.10 712 801 1.5E-269 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 Gene3D G3DSA:1.20.1640.10 10 503 1.5E-269 T 13-10-2018 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 SUPERFAMILY SSF82714 184 263 1.14E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 Gene3D G3DSA:3.30.70.1430 558 658 1.5E-269 T 13-10-2018 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 Gene3D G3DSA:3.30.2090.10 178 268 1.5E-269 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 SUPERFAMILY SSF82866 799 1025 5.23E-49 T 13-10-2018 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 Gene3D G3DSA:1.20.1640.10 504 1016 1.5E-269 T 13-10-2018 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 SUPERFAMILY SSF82693 40 126 3.92E-21 T 13-10-2018 TREPR_0547 e03274925a4b739f2c407f3b9de048f6 1039 SUPERFAMILY SSF82866 296 490 8.24E-39 T 13-10-2018 TREPR_3042 040dd5b2fe68baf4f60b0dc8dcf07cea 205 SUPERFAMILY SSF56784 3 189 5.02E-35 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_3042 040dd5b2fe68baf4f60b0dc8dcf07cea 205 Gene3D G3DSA:3.90.1470.10 13 128 2.0E-72 T 13-10-2018 TREPR_3042 040dd5b2fe68baf4f60b0dc8dcf07cea 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 2 195 6.8E-78 T 13-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 TREPR_3042 040dd5b2fe68baf4f60b0dc8dcf07cea 205 Pfam PF00702 haloacid dehalogenase-like hydrolase 36 164 1.3E-7 T 13-10-2018 TREPR_3042 040dd5b2fe68baf4f60b0dc8dcf07cea 205 Gene3D G3DSA:3.40.50.1000 3 191 2.0E-72 T 13-10-2018 IPR023214 HAD superfamily TREPR_1352 9ec2e26101a53111f8a86ab471cc5c29 537 Pfam PF03313 Serine dehydratase alpha chain 250 501 3.7E-27 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit TREPR_1352 9ec2e26101a53111f8a86ab471cc5c29 537 SUPERFAMILY SSF143548 30 148 3.92E-10 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 TREPR_1574 78cb72eb6ac76b130440fdf4519a2f34 855 SUPERFAMILY SSF81606 533 693 1.18E-7 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_1574 78cb72eb6ac76b130440fdf4519a2f34 855 Gene3D G3DSA:3.60.40.10 482 744 1.8E-38 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_1574 78cb72eb6ac76b130440fdf4519a2f34 855 SMART SM00331 519 750 1.9E-39 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_1574 78cb72eb6ac76b130440fdf4519a2f34 855 SMART SM00304 428 485 0.0042 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_1574 78cb72eb6ac76b130440fdf4519a2f34 855 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 546 697 4.0E-24 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_1574 78cb72eb6ac76b130440fdf4519a2f34 855 Pfam PF00672 HAMP domain 430 481 2.3E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_3769 f1e3848d17917c308ae72cdd0230ab4e 286 Pfam PF01435 Peptidase family M48 96 264 4.1E-26 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TREPR_3769 f1e3848d17917c308ae72cdd0230ab4e 286 Gene3D G3DSA:3.30.2010.10 72 159 3.6E-9 T 13-10-2018 TREPR_2129 e42b37b79f8647d8096901d84bc158bd 284 SUPERFAMILY SSF161098 76 263 1.41E-25 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2129 e42b37b79f8647d8096901d84bc158bd 284 Gene3D G3DSA:1.10.3720.10 72 274 2.4E-21 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2129 e42b37b79f8647d8096901d84bc158bd 284 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 52 2.7E-5 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_2129 e42b37b79f8647d8096901d84bc158bd 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 279 3.6E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0521 11dac7ae8ede510d994e3c2daa07eacb 250 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TREPR_0521 11dac7ae8ede510d994e3c2daa07eacb 250 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 3.4E-47 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TREPR_0521 11dac7ae8ede510d994e3c2daa07eacb 250 Gene3D G3DSA:3.40.1010.10 1 111 8.9E-29 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TREPR_0521 11dac7ae8ede510d994e3c2daa07eacb 250 Gene3D G3DSA:3.30.950.10 112 228 2.5E-44 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TREPR_0521 11dac7ae8ede510d994e3c2daa07eacb 250 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 4 246 2.5E-100 T 13-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 TREPR_0521 11dac7ae8ede510d994e3c2daa07eacb 250 SUPERFAMILY SSF53790 1 244 1.83E-66 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TREPR_2381 d88b5918fb178c166af13c16d3c9b02b 526 Gene3D G3DSA:2.160.10.10 338 525 1.2E-52 T 13-10-2018 TREPR_2381 d88b5918fb178c166af13c16d3c9b02b 526 SUPERFAMILY SSF51161 353 510 1.12E-38 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily TREPR_2381 d88b5918fb178c166af13c16d3c9b02b 526 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 429 462 2.3E-8 T 13-10-2018 IPR001451 Hexapeptide repeat TREPR_2381 d88b5918fb178c166af13c16d3c9b02b 526 SUPERFAMILY SSF53448 5 276 5.91E-14 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2306 0087a403c662640f62a57d16bf006ec0 256 Gene3D G3DSA:3.40.50.300 1 253 2.5E-62 T 13-10-2018 TREPR_2306 0087a403c662640f62a57d16bf006ec0 256 SMART SM00382 31 223 5.8E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2306 0087a403c662640f62a57d16bf006ec0 256 Pfam PF00005 ABC transporter 22 174 3.9E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2306 0087a403c662640f62a57d16bf006ec0 256 SUPERFAMILY SSF52540 3 235 1.15E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2306 0087a403c662640f62a57d16bf006ec0 256 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 186 347 5.5E-39 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 349 28.588 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 Gene3D G3DSA:1.10.1040.10 195 355 1.3E-33 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 1.5E-23 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 179 203 1.5E-23 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 256 273 1.5E-23 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 1.5E-23 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 139 159 1.5E-23 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 165 1.4E-41 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 SUPERFAMILY SSF48179 186 352 1.0E-32 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 Gene3D G3DSA:3.40.50.720 1 193 2.2E-47 T 13-10-2018 TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 SUPERFAMILY SSF51735 3 181 7.45E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0614 350ad2306b6df51d08aa4788b4f374a9 355 PIRSF PIRSF000114 1 355 8.3E-88 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 Pfam PF00406 Adenylate kinase 6 185 9.0E-45 T 13-10-2018 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 Gene3D G3DSA:3.40.50.300 1 210 5.9E-72 T 13-10-2018 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 SUPERFAMILY SSF52540 3 204 1.22E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 TIGRFAM TIGR01351 adk: adenylate kinase 2 207 2.8E-71 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 PRINTS PR00094 Adenylate kinase signature 81 97 8.3E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 PRINTS PR00094 Adenylate kinase signature 155 170 8.3E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 PRINTS PR00094 Adenylate kinase signature 32 46 8.3E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 PRINTS PR00094 Adenylate kinase signature 4 17 8.3E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 PRINTS PR00094 Adenylate kinase signature 172 186 8.3E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 Hamap MF_00235 Adenylate kinase [adk]. 1 208 45.156 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TREPR_0854 1bad2d559c06d625f4426ef5b1a78e33 211 Pfam PF05191 Adenylate kinase, active site lid 122 157 1.3E-13 T 13-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TREPR_0384 5e2d347ae245321b8cb31178fa595dc5 351 Gene3D G3DSA:3.40.1030.10 70 336 2.6E-106 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_0384 5e2d347ae245321b8cb31178fa595dc5 351 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 4 332 37.335 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 TREPR_0384 5e2d347ae245321b8cb31178fa595dc5 351 SUPERFAMILY SSF52418 70 330 4.45E-92 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_0384 5e2d347ae245321b8cb31178fa595dc5 351 SUPERFAMILY SSF47648 1 68 1.05E-17 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_0384 5e2d347ae245321b8cb31178fa595dc5 351 Pfam PF00591 Glycosyl transferase family, a/b domain 73 323 5.8E-95 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_0384 5e2d347ae245321b8cb31178fa595dc5 351 Gene3D G3DSA:1.20.970.10 1 68 3.7E-21 T 13-10-2018 TREPR_0384 5e2d347ae245321b8cb31178fa595dc5 351 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 64 4.0E-17 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_0384 5e2d347ae245321b8cb31178fa595dc5 351 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 331 2.0E-122 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 TREPR_3498 102d1cb18bf719bfbbb8c83fb38a4f45 301 Gene3D G3DSA:3.20.20.70 2 300 1.9E-90 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3498 102d1cb18bf719bfbbb8c83fb38a4f45 301 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 239 259 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 TREPR_3498 102d1cb18bf719bfbbb8c83fb38a4f45 301 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 5 301 37.448 T 13-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 TREPR_3498 102d1cb18bf719bfbbb8c83fb38a4f45 301 SUPERFAMILY SSF51395 3 300 3.26E-81 T 13-10-2018 TREPR_3498 102d1cb18bf719bfbbb8c83fb38a4f45 301 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 5 300 1.3E-100 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TREPR_3498 102d1cb18bf719bfbbb8c83fb38a4f45 301 Pfam PF01180 Dihydroorotate dehydrogenase 5 286 9.7E-63 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TREPR_3498 102d1cb18bf719bfbbb8c83fb38a4f45 301 PIRSF PIRSF000164 1 301 2.4E-71 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 Gene3D G3DSA:1.10.8.10 311 329 1.8E-23 T 13-10-2018 TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 Pfam PF07724 AAA domain (Cdc48 subfamily) 273 411 2.8E-36 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 Gene3D G3DSA:3.40.50.300 7 133 5.0E-34 T 13-10-2018 TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 6 526 40.856 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 Gene3D G3DSA:3.40.50.300 330 393 1.8E-23 T 13-10-2018 TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 SMART SM00382 54 415 2.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 SUPERFAMILY SSF52540 7 521 3.77E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 Gene3D G3DSA:1.10.8.60 418 523 1.1E-35 T 13-10-2018 TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 SMART SM01086 418 517 2.7E-19 T 13-10-2018 IPR019489 Clp ATPase, C-terminal TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 58 110 4.1E-6 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_2562 1d5711a0f7cfb5cb2e33ad48b8c0d317 526 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 218 526 3.8E-117 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TREPR_2646 e5e1b24913a5afddb59975e361aff9db 341 SMART SM00028 60 93 0.0082 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2646 e5e1b24913a5afddb59975e361aff9db 341 SMART SM00028 94 127 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2646 e5e1b24913a5afddb59975e361aff9db 341 SMART SM00028 26 59 4.9E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2646 e5e1b24913a5afddb59975e361aff9db 341 Pfam PF14559 Tetratricopeptide repeat 37 99 2.9E-7 T 13-10-2018 TREPR_2646 e5e1b24913a5afddb59975e361aff9db 341 SUPERFAMILY SSF48452 25 225 2.85E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2646 e5e1b24913a5afddb59975e361aff9db 341 Gene3D G3DSA:1.25.40.10 22 255 8.2E-28 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3494 2ca604700cf64bf619b07885bb13aac0 307 SUPERFAMILY SSF51366 5 264 6.12E-61 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TREPR_3494 2ca604700cf64bf619b07885bb13aac0 307 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 263 5.4E-29 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3494 2ca604700cf64bf619b07885bb13aac0 307 SMART SM00934 17 278 1.4E-36 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3494 2ca604700cf64bf619b07885bb13aac0 307 Gene3D G3DSA:3.20.20.70 3 305 6.1E-86 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3494 2ca604700cf64bf619b07885bb13aac0 307 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 94 107 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3494 2ca604700cf64bf619b07885bb13aac0 307 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 6 263 7.5E-66 T 13-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_3494 2ca604700cf64bf619b07885bb13aac0 307 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 3 303 33.498 T 13-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TREPR_0629 76b0c600e03a790044823bd3ec477c19 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0629 76b0c600e03a790044823bd3ec477c19 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 381 5.2E-137 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0629 76b0c600e03a790044823bd3ec477c19 381 SUPERFAMILY SSF53383 26 381 4.17E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0629 76b0c600e03a790044823bd3ec477c19 381 Gene3D G3DSA:3.40.640.10 3 249 6.3E-86 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0629 76b0c600e03a790044823bd3ec477c19 381 Gene3D G3DSA:3.90.1150.10 250 381 2.0E-44 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0629 76b0c600e03a790044823bd3ec477c19 381 PIRSF PIRSF001434 1 381 8.1E-133 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 437 455 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 Gene3D G3DSA:3.20.20.60 226 535 3.2E-114 T 13-10-2018 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 Pfam PF00391 PEP-utilising enzyme, mobile domain 142 215 3.5E-19 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 PIRSF PIRSF000732 1 533 4.9E-191 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 SUPERFAMILY SSF51621 239 529 1.05E-104 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 SUPERFAMILY SSF47831 34 133 2.09E-25 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 SUPERFAMILY SSF52009 115 235 1.29E-32 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 Gene3D G3DSA:3.50.30.10 5 225 5.5E-63 T 13-10-2018 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 529 3.8E-109 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 Gene3D G3DSA:1.10.274.10 22 136 5.5E-63 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 3 529 4.0E-169 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 437 452 1.4E-25 T 13-10-2018 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 490 502 1.4E-25 T 13-10-2018 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 283 302 1.4E-25 T 13-10-2018 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 454 469 1.4E-25 T 13-10-2018 TREPR_0463 e63ed55e8600f1d9ff0537a401115867 537 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 116 6.5E-22 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TREPR_3161 3bed6b1e467b4b342111c957c77b2755 118 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 103 9.1E-26 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 TREPR_3161 3bed6b1e467b4b342111c957c77b2755 118 Pfam PF02021 Uncharacterised protein family UPF0102 11 102 6.1E-25 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 TREPR_3161 3bed6b1e467b4b342111c957c77b2755 118 SUPERFAMILY SSF52980 7 108 1.17E-22 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_3161 3bed6b1e467b4b342111c957c77b2755 118 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 115 22.223 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 TREPR_3161 3bed6b1e467b4b342111c957c77b2755 118 Gene3D G3DSA:3.40.1350.10 10 117 1.8E-33 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TREPR_1784 6031ea584456789fd3ad3acdd8fcf2d8 312 SUPERFAMILY SSF161098 104 293 1.42E-20 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1784 6031ea584456789fd3ad3acdd8fcf2d8 312 Gene3D G3DSA:1.10.3720.10 96 310 3.1E-14 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1784 6031ea584456789fd3ad3acdd8fcf2d8 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 310 6.6E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1784 6031ea584456789fd3ad3acdd8fcf2d8 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 37 71 1.7E-7 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_2730 e4be0b27a45daa64f8a43bafbe9e9298 356 Gene3D G3DSA:3.40.50.150 110 346 2.7E-60 T 13-10-2018 TREPR_2730 e4be0b27a45daa64f8a43bafbe9e9298 356 Gene3D G3DSA:3.30.750.80 18 109 1.8E-23 T 13-10-2018 TREPR_2730 e4be0b27a45daa64f8a43bafbe9e9298 356 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 116 218 3.9E-20 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 TREPR_2730 e4be0b27a45daa64f8a43bafbe9e9298 356 SUPERFAMILY SSF53335 22 313 2.96E-53 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2538 7b4a0ec1008806041985c4b8fd2368f8 256 Gene3D G3DSA:3.40.50.300 4 250 2.1E-44 T 13-10-2018 TREPR_2538 7b4a0ec1008806041985c4b8fd2368f8 256 Pfam PF00005 ABC transporter 44 175 7.7E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2538 7b4a0ec1008806041985c4b8fd2368f8 256 SUPERFAMILY SSF52540 36 240 4.57E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2538 7b4a0ec1008806041985c4b8fd2368f8 256 SMART SM00382 53 224 4.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1194 a33ca914656eb187b4e897dbfb0015e4 374 Gene3D G3DSA:1.10.260.40 1 90 3.7E-24 T 13-10-2018 TREPR_1194 a33ca914656eb187b4e897dbfb0015e4 374 Pfam PF13413 Helix-turn-helix domain 8 68 4.2E-19 T 13-10-2018 TREPR_3736 d2c7cb48788007f06d8b57ad720de26d 196 Pfam PF03269 Caenorhabditis protein of unknown function, DUF268 73 162 2.2E-16 T 13-10-2018 IPR004951 Protein of unknown function DUF268, Caenorhabditis species TREPR_3736 d2c7cb48788007f06d8b57ad720de26d 196 SUPERFAMILY SSF53335 43 152 3.45E-11 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3736 d2c7cb48788007f06d8b57ad720de26d 196 Gene3D G3DSA:3.40.50.150 18 182 1.5E-10 T 13-10-2018 TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 159 311 5.2E-9 T 13-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 Pfam PF04851 Type III restriction enzyme, res subunit 348 504 8.5E-35 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 Gene3D G3DSA:3.90.1570.30 181 330 1.6E-26 T 13-10-2018 TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 Pfam PF00271 Helicase conserved C-terminal domain 616 716 5.7E-9 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 Gene3D G3DSA:3.40.50.300 526 764 1.1E-53 T 13-10-2018 TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 Pfam PF08463 EcoEI R protein C-terminal 978 1123 2.1E-17 T 13-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 Pfam PF13643 Domain of unknown function (DUF4145) 24 114 8.7E-9 T 13-10-2018 IPR025285 Domain of unknown function DUF4145 TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 SUPERFAMILY SSF52540 361 717 1.66E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 Gene3D G3DSA:3.40.50.300 333 518 4.0E-49 T 13-10-2018 TREPR_0817 1a3c8f8246e2a8cf877c1c3c376c5c6c 1131 SMART SM00487 343 529 1.7E-18 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 Gene3D G3DSA:2.40.50.100 119 191 1.1E-151 T 13-10-2018 TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 88 203 5.5E-33 T 13-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 431 440 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 3 577 43.81 T 13-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 SUPERFAMILY SSF52540 174 444 2.78E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 220 440 1.0E-76 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 Gene3D G3DSA:3.40.50.300 77 437 1.1E-151 T 13-10-2018 TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 Gene3D G3DSA:2.40.30.20 4 75 3.7E-12 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 72 2.3E-7 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_2656 4f5cfd1ee509f90a954e8096426d5103 586 Gene3D G3DSA:1.10.1140.10 438 574 1.0E-11 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 Gene3D G3DSA:3.90.650.10 863 979 6.0E-6 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 SUPERFAMILY SSF56042 454 634 7.85E-32 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1110 1373 8.8E-82 T 13-10-2018 TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 Gene3D G3DSA:3.30.1330.10 697 862 7.6E-24 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 Gene3D G3DSA:3.90.650.10 441 635 1.5E-44 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 SUPERFAMILY SSF55326 206 443 8.72E-28 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 SMART SM01211 1110 1373 2.6E-103 T 13-10-2018 TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 SUPERFAMILY SSF55326 687 863 8.79E-24 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 Gene3D G3DSA:3.40.50.880 1056 1371 4.8E-76 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 SUPERFAMILY SSF56042 883 950 5.65E-6 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 Pfam PF02769 AIR synthase related protein, C-terminal domain 454 602 1.8E-20 T 13-10-2018 IPR010918 PurM-like, C-terminal domain TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 3 959 0.0 T 13-10-2018 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM TREPR_1070 a098872b08d3e4c4b70420d8297ecde6 1374 SUPERFAMILY SSF52317 1108 1372 3.91E-65 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_1853 fe8ef44e1f5b5c9cf21e8cf48049fd15 219 SUPERFAMILY SSF46894 159 216 4.42E-12 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_1853 fe8ef44e1f5b5c9cf21e8cf48049fd15 219 SMART SM00421 163 219 1.6E-4 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1853 fe8ef44e1f5b5c9cf21e8cf48049fd15 219 Gene3D G3DSA:3.40.50.12740 24 219 1.5E-24 T 13-10-2018 TREPR_1853 fe8ef44e1f5b5c9cf21e8cf48049fd15 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 3.0E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1853 fe8ef44e1f5b5c9cf21e8cf48049fd15 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 3.0E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1853 fe8ef44e1f5b5c9cf21e8cf48049fd15 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 3.0E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1853 fe8ef44e1f5b5c9cf21e8cf48049fd15 219 SUPERFAMILY SSF52172 23 178 5.76E-6 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1853 fe8ef44e1f5b5c9cf21e8cf48049fd15 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 215 1.9E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3728 0f3e2a30d99c469794d54b87e01260a4 459 Gene3D G3DSA:3.40.50.150 245 442 8.6E-7 T 13-10-2018 TREPR_3728 0f3e2a30d99c469794d54b87e01260a4 459 SUPERFAMILY SSF53335 265 403 5.45E-7 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_1458 a812eae29f56f5f7fe5025fed5fd044b 286 Pfam PF03168 Late embryogenesis abundant protein 181 266 1.5E-6 T 13-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup TREPR_1458 a812eae29f56f5f7fe5025fed5fd044b 286 SUPERFAMILY SSF117070 15 155 6.02E-6 T 13-10-2018 TREPR_1458 a812eae29f56f5f7fe5025fed5fd044b 286 SMART SM00769 161 281 0.0025 T 13-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 TREPR_1458 a812eae29f56f5f7fe5025fed5fd044b 286 SUPERFAMILY SSF117070 157 269 6.41E-16 T 13-10-2018 TREPR_1458 a812eae29f56f5f7fe5025fed5fd044b 286 Gene3D G3DSA:2.60.40.1820 141 285 4.2E-12 T 13-10-2018 TREPR_2511 14a8e18a282715dc12496eef87142eb0 534 Pfam PF07969 Amidohydrolase family 46 254 4.5E-11 T 13-10-2018 IPR013108 Amidohydrolase 3 TREPR_2511 14a8e18a282715dc12496eef87142eb0 534 Pfam PF07969 Amidohydrolase family 402 491 9.3E-12 T 13-10-2018 IPR013108 Amidohydrolase 3 TREPR_2511 14a8e18a282715dc12496eef87142eb0 534 SUPERFAMILY SSF51338 6 517 1.7E-20 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_2511 14a8e18a282715dc12496eef87142eb0 534 SUPERFAMILY SSF51556 58 472 1.19E-62 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_2824 19fad64fdbabc6f44f3a505f2657e5a8 372 Pfam PF13350 Tyrosine phosphatase family 172 370 8.4E-18 T 13-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type TREPR_2824 19fad64fdbabc6f44f3a505f2657e5a8 372 Gene3D G3DSA:3.90.190.10 162 370 1.8E-22 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like TREPR_2824 19fad64fdbabc6f44f3a505f2657e5a8 372 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 271 281 - T 13-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 TREPR_2824 19fad64fdbabc6f44f3a505f2657e5a8 372 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 16 130 1.7E-10 T 13-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase TREPR_2824 19fad64fdbabc6f44f3a505f2657e5a8 372 Gene3D G3DSA:2.40.30.90 34 133 9.2E-21 T 13-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal TREPR_2824 19fad64fdbabc6f44f3a505f2657e5a8 372 SUPERFAMILY SSF52799 165 370 4.39E-19 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like TREPR_2824 19fad64fdbabc6f44f3a505f2657e5a8 372 SUPERFAMILY SSF101852 42 132 5.49E-16 T 13-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal TREPR_2865 e6fd49825ea9c61db30a5e92e585ae95 463 Pfam PF02120 Flagellar hook-length control protein FliK 332 406 5.4E-16 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal TREPR_2865 e6fd49825ea9c61db30a5e92e585ae95 463 Gene3D G3DSA:3.30.750.140 308 417 7.3E-11 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily TREPR_3135 534416b4f8b84e86220eb361d184acc2 293 SUPERFAMILY SSF54001 16 280 1.03E-49 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_3135 534416b4f8b84e86220eb361d184acc2 293 Pfam PF00797 N-acetyltransferase 36 280 1.9E-44 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 TREPR_3135 534416b4f8b84e86220eb361d184acc2 293 PRINTS PR01543 Arylamine N-acetyltransferase signature 197 219 1.3E-7 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 TREPR_3135 534416b4f8b84e86220eb361d184acc2 293 PRINTS PR01543 Arylamine N-acetyltransferase signature 115 140 1.3E-7 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 TREPR_3135 534416b4f8b84e86220eb361d184acc2 293 PRINTS PR01543 Arylamine N-acetyltransferase signature 35 58 1.3E-7 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 TREPR_3135 534416b4f8b84e86220eb361d184acc2 293 Gene3D G3DSA:3.30.2140.20 15 287 3.5E-56 T 13-10-2018 TREPR_1356 de08eb0b38acc8d694771b566a58cbd7 257 ProSitePatterns PS01229 Hypothetical cof family signature 2. 205 227 - T 13-10-2018 TREPR_1356 de08eb0b38acc8d694771b566a58cbd7 257 Gene3D G3DSA:3.40.50.1000 8 250 1.3E-48 T 13-10-2018 IPR023214 HAD superfamily TREPR_1356 de08eb0b38acc8d694771b566a58cbd7 257 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 250 2.9E-40 T 13-10-2018 TREPR_1356 de08eb0b38acc8d694771b566a58cbd7 257 Gene3D G3DSA:3.30.1240.10 84 180 1.3E-48 T 13-10-2018 TREPR_1356 de08eb0b38acc8d694771b566a58cbd7 257 SUPERFAMILY SSF56784 5 256 3.62E-49 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_3293 069fd1b57f7d5594361d48bc97879b6f 272 Pfam PF02361 Cobalt transport protein 21 224 4.9E-27 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TREPR_3293 069fd1b57f7d5594361d48bc97879b6f 272 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 27 220 1.7E-38 T 13-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 TREPR_3651 1780c7fb88536ed680b757f406fe680a 374 Gene3D G3DSA:2.60.200.40 198 354 3.0E-12 T 13-10-2018 TREPR_3651 1780c7fb88536ed680b757f406fe680a 374 Gene3D G3DSA:3.40.50.10330 23 189 2.8E-8 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TREPR_3651 1780c7fb88536ed680b757f406fe680a 374 SUPERFAMILY SSF111331 24 370 1.1E-27 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TREPR_3651 1780c7fb88536ed680b757f406fe680a 374 Pfam PF00781 Diacylglycerol kinase catalytic domain 27 166 9.5E-8 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 TREPR_0423 3c03a2291c53b355f155953f6a31e539 440 Pfam PF00202 Aminotransferase class-III 26 432 2.1E-91 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TREPR_0423 3c03a2291c53b355f155953f6a31e539 440 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 277 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TREPR_0423 3c03a2291c53b355f155953f6a31e539 440 Gene3D G3DSA:3.90.1150.10 13 431 4.6E-139 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0423 3c03a2291c53b355f155953f6a31e539 440 SUPERFAMILY SSF53383 4 433 2.04E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0423 3c03a2291c53b355f155953f6a31e539 440 Gene3D G3DSA:3.40.640.10 61 326 4.6E-139 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0634 2cfee6bbb61ac8615cbc74d4a11d9a59 391 Gene3D G3DSA:3.40.640.10 41 280 2.0E-132 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0634 2cfee6bbb61ac8615cbc74d4a11d9a59 391 Gene3D G3DSA:3.90.1150.10 17 378 2.0E-132 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0634 2cfee6bbb61ac8615cbc74d4a11d9a59 391 Pfam PF00155 Aminotransferase class I and II 27 377 2.7E-64 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TREPR_0634 2cfee6bbb61ac8615cbc74d4a11d9a59 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 157 181 7.7E-11 T 13-10-2018 TREPR_0634 2cfee6bbb61ac8615cbc74d4a11d9a59 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 89 109 7.7E-11 T 13-10-2018 TREPR_0634 2cfee6bbb61ac8615cbc74d4a11d9a59 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 193 216 7.7E-11 T 13-10-2018 TREPR_0634 2cfee6bbb61ac8615cbc74d4a11d9a59 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 111 132 7.7E-11 T 13-10-2018 TREPR_0634 2cfee6bbb61ac8615cbc74d4a11d9a59 391 SUPERFAMILY SSF53383 1 380 1.17E-109 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0634 2cfee6bbb61ac8615cbc74d4a11d9a59 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 229 242 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TREPR_1150 e545ff14984000bdfd2076823ec44f2c 114 SUPERFAMILY SSF159468 4 113 3.27E-12 T 13-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1150 e545ff14984000bdfd2076823ec44f2c 114 Gene3D G3DSA:3.40.50.10580 1 114 2.3E-14 T 13-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1150 e545ff14984000bdfd2076823ec44f2c 114 Pfam PF01990 ATP synthase (F/14-kDa) subunit 5 108 2.3E-10 T 13-10-2018 IPR008218 ATPase, V1 complex, subunit F GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_2887 10ee2f52e0ca66eb1bb6a4d2c33af9ca 546 Gene3D G3DSA:3.40.50.1980 64 205 2.5E-39 T 13-10-2018 TREPR_2887 10ee2f52e0ca66eb1bb6a4d2c33af9ca 546 Gene3D G3DSA:3.40.50.1980 315 532 2.2E-73 T 13-10-2018 TREPR_2887 10ee2f52e0ca66eb1bb6a4d2c33af9ca 546 Gene3D G3DSA:3.40.50.1980 210 314 5.8E-32 T 13-10-2018 TREPR_2887 10ee2f52e0ca66eb1bb6a4d2c33af9ca 546 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 153 167 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 TREPR_2887 10ee2f52e0ca66eb1bb6a4d2c33af9ca 546 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 63 520 1.5E-128 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_2887 10ee2f52e0ca66eb1bb6a4d2c33af9ca 546 SUPERFAMILY SSF53807 13 533 1.28E-151 T 13-10-2018 TREPR_2887 10ee2f52e0ca66eb1bb6a4d2c33af9ca 546 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 82 89 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 TREPR_2887 10ee2f52e0ca66eb1bb6a4d2c33af9ca 546 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 29 522 3.3E-164 T 13-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 TREPR_1723 677848adfe4dd7cd449e22e8074754a5 361 Gene3D G3DSA:3.20.20.70 72 338 4.8E-82 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1723 677848adfe4dd7cd449e22e8074754a5 361 Pfam PF13394 4Fe-4S single cluster domain 117 203 3.2E-5 T 13-10-2018 TREPR_1723 677848adfe4dd7cd449e22e8074754a5 361 Gene3D G3DSA:1.10.150.530 1 70 3.8E-13 T 13-10-2018 TREPR_1723 677848adfe4dd7cd449e22e8074754a5 361 SUPERFAMILY SSF102114 103 337 9.16E-16 T 13-10-2018 TREPR_1723 677848adfe4dd7cd449e22e8074754a5 361 Pfam PF04055 Radical SAM superfamily 114 276 5.7E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_1723 677848adfe4dd7cd449e22e8074754a5 361 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 11 348 8.7E-93 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TREPR_1723 677848adfe4dd7cd449e22e8074754a5 361 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 12 353 60.026 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TREPR_1723 677848adfe4dd7cd449e22e8074754a5 361 PIRSF PIRSF006004 8 354 2.1E-102 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 TREPR_3036 b4ce7141d31a65dbdaec0e015cda06ea 365 Pfam PF08402 TOBE domain 276 344 2.5E-9 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TREPR_3036 b4ce7141d31a65dbdaec0e015cda06ea 365 Pfam PF00005 ABC transporter 22 162 7.5E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3036 b4ce7141d31a65dbdaec0e015cda06ea 365 SUPERFAMILY SSF50331 238 349 8.26E-14 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_3036 b4ce7141d31a65dbdaec0e015cda06ea 365 SMART SM00382 29 212 5.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3036 b4ce7141d31a65dbdaec0e015cda06ea 365 SUPERFAMILY SSF52540 5 242 1.08E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3036 b4ce7141d31a65dbdaec0e015cda06ea 365 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3036 b4ce7141d31a65dbdaec0e015cda06ea 365 Gene3D G3DSA:3.40.50.300 1 238 6.6E-72 T 13-10-2018 TREPR_3036 b4ce7141d31a65dbdaec0e015cda06ea 365 Gene3D G3DSA:2.40.50.140 279 341 1.1E-6 T 13-10-2018 TREPR_3036 b4ce7141d31a65dbdaec0e015cda06ea 365 Gene3D G3DSA:2.40.50.100 239 351 1.1E-6 T 13-10-2018 TREPR_2905 f59c5c027068a260dd3db68a78aadc73 208 Gene3D G3DSA:1.10.1240.10 1 74 6.5E-10 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2905 f59c5c027068a260dd3db68a78aadc73 208 SUPERFAMILY SSF47644 3 78 2.75E-8 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2905 f59c5c027068a260dd3db68a78aadc73 208 Gene3D G3DSA:3.40.50.280 75 208 6.3E-37 T 13-10-2018 TREPR_2905 f59c5c027068a260dd3db68a78aadc73 208 Pfam PF02310 B12 binding domain 87 189 8.1E-19 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_2905 f59c5c027068a260dd3db68a78aadc73 208 SMART SM01018 2 80 0.0017 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2905 f59c5c027068a260dd3db68a78aadc73 208 SUPERFAMILY SSF52242 73 206 1.03E-33 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_3721 3d093f6b162ff50450b3ebd0b952dcbc 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 111 8.8E-27 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TREPR_3721 3d093f6b162ff50450b3ebd0b952dcbc 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 208 1.3E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3721 3d093f6b162ff50450b3ebd0b952dcbc 219 SUPERFAMILY SSF161098 13 202 7.33E-43 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3721 3d093f6b162ff50450b3ebd0b952dcbc 219 Gene3D G3DSA:1.10.3720.10 4 217 2.4E-50 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 Gene3D G3DSA:1.20.1580.10 715 853 9.3E-139 T 13-10-2018 TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 Gene3D G3DSA:1.20.1580.10 90 517 6.1E-247 T 13-10-2018 TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 Gene3D G3DSA:1.10.8.280 312 428 6.1E-247 T 13-10-2018 TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 Gene3D G3DSA:3.40.50.300 640 958 9.3E-139 T 13-10-2018 TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 SUPERFAMILY SSF52540 10 594 2.06E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 ProSitePatterns PS00211 ABC transporters family signature. 853 867 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 SUPERFAMILY SSF52540 643 933 8.59E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 ProSitePatterns PS00211 ABC transporters family signature. 512 526 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 948 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 Gene3D G3DSA:3.40.50.300 5 619 6.1E-247 T 13-10-2018 TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 Gene3D G3DSA:3.30.190.20 130 254 6.1E-247 T 13-10-2018 TREPR_2582 5f754fc140be5b6942106e24fb962f95 975 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 963 23.132 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TREPR_2449 b3a8a8984652da9356422d760337e691 171 Pfam PF05163 DinB family 3 161 7.6E-20 T 13-10-2018 IPR007837 DNA damage-inducible protein DinB TREPR_2449 b3a8a8984652da9356422d760337e691 171 SUPERFAMILY SSF109854 4 155 9.34E-23 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TREPR_2449 b3a8a8984652da9356422d760337e691 171 Gene3D G3DSA:1.20.120.450 2 168 1.7E-28 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TREPR_3599 09c128ead3fe3f3c4e1edfa92d5433c7 326 SUPERFAMILY SSF53613 2 322 2.65E-61 T 13-10-2018 IPR029056 Ribokinase-like TREPR_3599 09c128ead3fe3f3c4e1edfa92d5433c7 326 Pfam PF00294 pfkB family carbohydrate kinase 2 315 4.1E-36 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB TREPR_3599 09c128ead3fe3f3c4e1edfa92d5433c7 326 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TREPR_3599 09c128ead3fe3f3c4e1edfa92d5433c7 326 Gene3D G3DSA:3.40.1190.20 1 326 2.2E-72 T 13-10-2018 IPR029056 Ribokinase-like TREPR_0514 d90b44484cb6be6288ea3cf8b6215cec 375 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 155 372 1.8E-14 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_0514 d90b44484cb6be6288ea3cf8b6215cec 375 SUPERFAMILY SSF51726 156 374 1.07E-24 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_0514 d90b44484cb6be6288ea3cf8b6215cec 375 Gene3D G3DSA:3.20.20.210 1 372 1.1E-29 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1163 4fd95ec069cb8b7ce91124782ac84e2c 78 SUPERFAMILY SSF143120 2 45 1.44E-9 T 13-10-2018 IPR036165 YefM-like superfamily TREPR_1163 4fd95ec069cb8b7ce91124782ac84e2c 78 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 46 5.3E-10 T 13-10-2018 TREPR_1163 4fd95ec069cb8b7ce91124782ac84e2c 78 Gene3D G3DSA:3.40.1620.10 1 38 2.2E-8 T 13-10-2018 TREPR_1163 4fd95ec069cb8b7ce91124782ac84e2c 78 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 57 1.1E-11 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 312 1.3E-65 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 Pfam PF02785 Biotin carboxylase C-terminal domain 341 431 6.2E-30 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 SUPERFAMILY SSF52440 2 113 1.01E-47 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 SUPERFAMILY SSF51246 330 435 1.15E-33 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 SMART SM00878 335 433 3.1E-45 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 Gene3D G3DSA:3.30.470.130 1 439 2.0E-169 T 13-10-2018 TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 110 3.9E-45 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TREPR_1270 ce1df8124b2230c8fc1987e701e08798 443 SUPERFAMILY SSF56059 83 338 2.02E-60 T 13-10-2018 TREPR_2810 75882ffea3b24c7f5acf09f706f8ccff 189 Gene3D G3DSA:1.20.1540.10 3 189 2.4E-22 T 13-10-2018 IPR035952 Rhomboid-like superfamily TREPR_2810 75882ffea3b24c7f5acf09f706f8ccff 189 Pfam PF01694 Rhomboid family 50 184 4.1E-18 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TREPR_2810 75882ffea3b24c7f5acf09f706f8ccff 189 SUPERFAMILY SSF144091 6 185 7.59E-25 T 13-10-2018 TREPR_1552 8a25f0be612beef5952f432d5edb0c82 334 Gene3D G3DSA:3.20.20.210 1 328 1.5E-47 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1552 8a25f0be612beef5952f432d5edb0c82 334 SUPERFAMILY SSF51726 3 333 2.09E-34 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1552 8a25f0be612beef5952f432d5edb0c82 334 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 58 314 5.7E-20 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_3127 f3964a3ba502449b161c5baa51b01458 314 Pfam PF02219 Methylenetetrahydrofolate reductase 8 220 4.1E-52 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TREPR_3127 f3964a3ba502449b161c5baa51b01458 314 SUPERFAMILY SSF51730 2 307 8.44E-62 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like TREPR_3127 f3964a3ba502449b161c5baa51b01458 314 Gene3D G3DSA:3.20.20.220 1 311 6.7E-77 T 13-10-2018 TREPR_3342 81849ba3c296b83911fe137cd46a2427 454 PRINTS PR01950 LanC-like protein superfamily signature 50 68 4.4E-8 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3342 81849ba3c296b83911fe137cd46a2427 454 PRINTS PR01950 LanC-like protein superfamily signature 298 318 4.4E-8 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3342 81849ba3c296b83911fe137cd46a2427 454 PRINTS PR01950 LanC-like protein superfamily signature 235 251 4.4E-8 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3342 81849ba3c296b83911fe137cd46a2427 454 PRINTS PR01950 LanC-like protein superfamily signature 352 365 4.4E-8 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3342 81849ba3c296b83911fe137cd46a2427 454 PRINTS PR01950 LanC-like protein superfamily signature 416 433 4.4E-8 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3342 81849ba3c296b83911fe137cd46a2427 454 SMART SM01260 47 446 1.3E-27 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3342 81849ba3c296b83911fe137cd46a2427 454 Pfam PF05147 Lanthionine synthetase C-like protein 52 435 1.1E-22 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3342 81849ba3c296b83911fe137cd46a2427 454 Gene3D G3DSA:1.50.10.10 9 445 1.8E-20 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TREPR_3342 81849ba3c296b83911fe137cd46a2427 454 SUPERFAMILY SSF158745 50 436 4.58E-39 T 13-10-2018 TREPR_2871 9cae6b231fa65f988813cd96b83ba27d 112 SMART SM00530 48 102 4.1E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2871 9cae6b231fa65f988813cd96b83ba27d 112 SUPERFAMILY SSF47413 47 99 5.63E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_2871 9cae6b231fa65f988813cd96b83ba27d 112 Gene3D G3DSA:1.10.260.40 11 106 8.1E-15 T 13-10-2018 TREPR_2803 f841c4bfcee5afcf9b27677e85b29628 210 Pfam PF12654 Domain of unknown function (DUF3786) 20 201 5.9E-36 T 13-10-2018 IPR024264 Domain of unknown function DUF3786 TREPR_1705 de69bef4f3a99ada9ffb78a007768506 727 Gene3D G3DSA:3.30.450.20 46 303 1.0E-32 T 13-10-2018 TREPR_1705 de69bef4f3a99ada9ffb78a007768506 727 SUPERFAMILY SSF58104 361 458 1.91E-8 T 13-10-2018 TREPR_1705 de69bef4f3a99ada9ffb78a007768506 727 Gene3D G3DSA:1.10.287.950 430 677 5.8E-46 T 13-10-2018 TREPR_1705 de69bef4f3a99ada9ffb78a007768506 727 SMART SM00283 436 683 3.9E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1705 de69bef4f3a99ada9ffb78a007768506 727 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 498 649 6.4E-28 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1705 de69bef4f3a99ada9ffb78a007768506 727 SMART SM00304 339 393 1.3E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_1705 de69bef4f3a99ada9ffb78a007768506 727 SUPERFAMILY SSF58104 447 681 9.42E-43 T 13-10-2018 TREPR_1705 de69bef4f3a99ada9ffb78a007768506 727 Gene3D G3DSA:3.30.450.20 59 200 1.0E-32 T 13-10-2018 TREPR_1705 de69bef4f3a99ada9ffb78a007768506 727 Gene3D G3DSA:1.20.1480.50 304 399 9.6E-11 T 13-10-2018 TREPR_2955 34ff0b3a55eb72b85c884e50ae3b4c6d 284 SUPERFAMILY SSF53254 43 277 7.99E-41 T 13-10-2018 IPR029033 Histidine phosphatase superfamily TREPR_2955 34ff0b3a55eb72b85c884e50ae3b4c6d 284 SMART SM00855 44 235 1.1E-12 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TREPR_2955 34ff0b3a55eb72b85c884e50ae3b4c6d 284 PIRSF PIRSF000709 38 142 2.0E-6 T 13-10-2018 TREPR_2955 34ff0b3a55eb72b85c884e50ae3b4c6d 284 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 47 56 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 TREPR_2955 34ff0b3a55eb72b85c884e50ae3b4c6d 284 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 190 266 7.9E-7 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TREPR_2955 34ff0b3a55eb72b85c884e50ae3b4c6d 284 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 45 138 4.6E-22 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TREPR_2955 34ff0b3a55eb72b85c884e50ae3b4c6d 284 Gene3D G3DSA:3.40.50.1240 32 283 4.9E-44 T 13-10-2018 IPR029033 Histidine phosphatase superfamily TREPR_3508 e10d6b3b77e22068f090ad34a7e1f662 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 105 2.4E-34 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TREPR_3508 e10d6b3b77e22068f090ad34a7e1f662 107 PIRSF PIRSF000077 1 107 1.8E-38 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TREPR_3508 e10d6b3b77e22068f090ad34a7e1f662 107 SUPERFAMILY SSF52833 4 106 1.59E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_3508 e10d6b3b77e22068f090ad34a7e1f662 107 Gene3D G3DSA:3.40.30.10 5 107 1.9E-33 T 13-10-2018 TREPR_3508 e10d6b3b77e22068f090ad34a7e1f662 107 PRINTS PR00421 Thioredoxin family signature 31 40 4.3E-8 T 13-10-2018 TREPR_3508 e10d6b3b77e22068f090ad34a7e1f662 107 PRINTS PR00421 Thioredoxin family signature 23 31 4.3E-8 T 13-10-2018 TREPR_3508 e10d6b3b77e22068f090ad34a7e1f662 107 PRINTS PR00421 Thioredoxin family signature 71 82 4.3E-8 T 13-10-2018 TREPR_3508 e10d6b3b77e22068f090ad34a7e1f662 107 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TREPR_3508 e10d6b3b77e22068f090ad34a7e1f662 107 Pfam PF00085 Thioredoxin 6 104 8.2E-32 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 Gene3D G3DSA:3.40.50.300 3 220 3.0E-63 T 13-10-2018 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 Pfam PF00009 Elongation factor Tu GTP binding domain 15 210 1.6E-39 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 Gene3D G3DSA:2.40.30.10 321 420 7.0E-17 T 13-10-2018 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 67 82 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 SUPERFAMILY SSF50465 322 420 2.3E-17 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 PRINTS PR00315 GTP-binding elongation factor signature 74 82 2.8E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 PRINTS PR00315 GTP-binding elongation factor signature 94 104 2.8E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 PRINTS PR00315 GTP-binding elongation factor signature 147 156 2.8E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 PRINTS PR00315 GTP-binding elongation factor signature 110 121 2.8E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 PRINTS PR00315 GTP-binding elongation factor signature 16 29 2.8E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 SUPERFAMILY SSF50447 224 314 5.08E-13 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 SUPERFAMILY SSF52540 15 239 7.65E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 201 3.9E-12 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_0249 5b5cf8103386a6aff9dfc24e786dd38a 461 Gene3D G3DSA:2.40.30.10 227 316 8.0E-19 T 13-10-2018 TREPR_1062 d866fc5306acf93e991e8d8f03767bf2 557 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 448 543 2.9E-27 T 13-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain TREPR_1062 d866fc5306acf93e991e8d8f03767bf2 557 Gene3D G3DSA:3.30.230.10 10 174 1.5E-8 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_1062 d866fc5306acf93e991e8d8f03767bf2 557 SUPERFAMILY SSF54211 6 173 5.31E-28 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_1062 d866fc5306acf93e991e8d8f03767bf2 557 Pfam PF01078 Magnesium chelatase, subunit ChlI 206 374 5.9E-71 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain TREPR_1062 d866fc5306acf93e991e8d8f03767bf2 557 SUPERFAMILY SSF52540 206 544 1.38E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1062 d866fc5306acf93e991e8d8f03767bf2 557 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 3 374 7.9E-117 T 13-10-2018 IPR004482 Mg chelatase-related protein TREPR_1062 d866fc5306acf93e991e8d8f03767bf2 557 Pfam PF13541 Subunit ChlI of Mg-chelatase 18 148 5.4E-36 T 13-10-2018 TREPR_1062 d866fc5306acf93e991e8d8f03767bf2 557 SMART SM00382 226 378 1.9E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 613 7.1E-241 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 SUPERFAMILY SSF53697 248 613 1.86E-106 T 13-10-2018 TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 Gene3D G3DSA:3.40.50.10490 451 598 1.1E-138 T 13-10-2018 TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 Gene3D G3DSA:3.40.50.10490 250 612 1.1E-138 T 13-10-2018 TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 613 39.518 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 SUPERFAMILY SSF56235 2 236 1.97E-70 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 Gene3D G3DSA:3.60.20.10 2 244 1.9E-74 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 Pfam PF13522 Glutamine amidotransferase domain 67 179 8.8E-21 T 13-10-2018 TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 Pfam PF01380 SIS domain 295 420 4.8E-31 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TREPR_1116 80008f5a5516cdc6caa50a341d209016 613 Pfam PF01380 SIS domain 469 594 2.9E-15 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TREPR_0474 1582eacf4a73237563b4daa4e9fc1689 349 SUPERFAMILY SSF56235 116 333 2.85E-5 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_0474 1582eacf4a73237563b4daa4e9fc1689 349 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 113 340 1.6E-30 T 13-10-2018 IPR005079 Peptidase C45 TREPR_0474 1582eacf4a73237563b4daa4e9fc1689 349 Gene3D G3DSA:3.60.60.10 101 349 1.9E-50 T 13-10-2018 TREPR_3792 ea8b78159e5efd6e8bb3e62f8f5ec6d4 196 SUPERFAMILY SSF46689 8 72 4.93E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3792 ea8b78159e5efd6e8bb3e62f8f5ec6d4 196 Gene3D G3DSA:1.10.10.60 1 50 2.4E-16 T 13-10-2018 TREPR_3792 ea8b78159e5efd6e8bb3e62f8f5ec6d4 196 SUPERFAMILY SSF48498 78 185 3.11E-19 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TREPR_3792 ea8b78159e5efd6e8bb3e62f8f5ec6d4 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 47 4.2E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_3792 ea8b78159e5efd6e8bb3e62f8f5ec6d4 196 Pfam PF13305 WHG domain 84 161 4.5E-12 T 13-10-2018 IPR025996 WHG domain TREPR_3792 ea8b78159e5efd6e8bb3e62f8f5ec6d4 196 Gene3D G3DSA:1.10.357.10 51 188 6.3E-25 T 13-10-2018 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 22 550 32.81 T 13-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 Gene3D G3DSA:1.10.10.350 458 549 2.5E-16 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 Pfam PF01921 tRNA synthetases class I (K) 23 384 1.9E-123 T 13-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 SUPERFAMILY SSF48163 345 549 4.45E-29 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 SUPERFAMILY SSF52374 23 341 7.93E-57 T 13-10-2018 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 Gene3D G3DSA:1.10.10.770 341 453 2.5E-27 T 13-10-2018 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 22 546 8.7E-161 T 13-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 Gene3D G3DSA:1.10.10.860 293 340 5.6E-22 T 13-10-2018 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 Gene3D G3DSA:3.40.50.620 24 292 6.4E-91 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 Gene3D G3DSA:2.30.30.300 190 234 6.4E-91 T 13-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 TREPR_2750 023a06b3e2db96138750e55dcf10f89b 550 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 59 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_2541 a8cf90fa6529732ff1c307ffb8a64e08 678 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 492 673 5.0E-38 T 13-10-2018 TREPR_2541 a8cf90fa6529732ff1c307ffb8a64e08 678 SMART SM00764 491 672 6.2E-67 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_2541 a8cf90fa6529732ff1c307ffb8a64e08 678 SUPERFAMILY SSF52374 495 675 1.52E-21 T 13-10-2018 TREPR_2541 a8cf90fa6529732ff1c307ffb8a64e08 678 SUPERFAMILY SSF52266 296 418 5.5E-5 T 13-10-2018 TREPR_2541 a8cf90fa6529732ff1c307ffb8a64e08 678 Gene3D G3DSA:3.40.50.620 492 677 6.0E-19 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2541 a8cf90fa6529732ff1c307ffb8a64e08 678 Pfam PF08218 Citrate lyase ligase C-terminal domain 492 672 4.9E-58 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_1747 206c6ffd05f290b85a9dd3dcc7f065ad 383 Pfam PF03116 NQR2, RnfD, RnfE family 18 356 1.7E-53 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 TREPR_0424 e375d1f1ff2fb9c071dbf40f06045330 407 Gene3D G3DSA:3.40.630.10 14 399 4.3E-126 T 13-10-2018 TREPR_0424 e375d1f1ff2fb9c071dbf40f06045330 407 PIRSF PIRSF001235 3 407 3.4E-119 T 13-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 TREPR_0424 e375d1f1ff2fb9c071dbf40f06045330 407 SUPERFAMILY SSF55031 212 309 3.31E-21 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_0424 e375d1f1ff2fb9c071dbf40f06045330 407 Gene3D G3DSA:3.30.70.360 212 323 4.3E-126 T 13-10-2018 TREPR_0424 e375d1f1ff2fb9c071dbf40f06045330 407 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 8 403 4.5E-109 T 13-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 TREPR_0424 e375d1f1ff2fb9c071dbf40f06045330 407 Pfam PF01546 Peptidase family M20/M25/M40 78 401 1.4E-28 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_0424 e375d1f1ff2fb9c071dbf40f06045330 407 SUPERFAMILY SSF53187 3 405 2.09E-80 T 13-10-2018 TREPR_1932 7345277e30b0877d358108a245f41dad 286 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 1.3E-41 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TREPR_1932 7345277e30b0877d358108a245f41dad 286 SUPERFAMILY SSF64518 1 286 1.7E-82 T 13-10-2018 TREPR_1932 7345277e30b0877d358108a245f41dad 286 PRINTS PR00207 Flagellin signature 109 132 5.7E-23 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TREPR_1932 7345277e30b0877d358108a245f41dad 286 PRINTS PR00207 Flagellin signature 35 52 5.7E-23 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TREPR_1932 7345277e30b0877d358108a245f41dad 286 PRINTS PR00207 Flagellin signature 74 93 5.7E-23 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TREPR_1932 7345277e30b0877d358108a245f41dad 286 Gene3D G3DSA:1.20.1330.10 43 180 4.6E-58 T 13-10-2018 TREPR_1932 7345277e30b0877d358108a245f41dad 286 Gene3D G3DSA:1.20.58.1830 3 31 4.6E-58 T 13-10-2018 TREPR_1932 7345277e30b0877d358108a245f41dad 286 Pfam PF00700 Bacterial flagellin C-terminal helical region 201 285 3.9E-23 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TREPR_1932 7345277e30b0877d358108a245f41dad 286 Gene3D G3DSA:1.10.8.410 232 286 2.9E-23 T 13-10-2018 TREPR_1691 89871969416281ed6a354452656eccb5 101 Pfam PF04221 RelB antitoxin 6 57 1.7E-14 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TREPR_1691 89871969416281ed6a354452656eccb5 101 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 3 58 5.7E-16 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TREPR_1691 89871969416281ed6a354452656eccb5 101 Gene3D G3DSA:1.10.1220.10 2 53 5.2E-12 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 12 699 4.2E-247 T 13-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 Pfam PF00384 Molybdopterin oxidoreductase 69 500 1.2E-83 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 Gene3D G3DSA:3.40.50.740 74 543 4.9E-170 T 13-10-2018 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 SMART SM00926 7 62 2.6E-13 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 SUPERFAMILY SSF50692 579 708 9.53E-39 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 Gene3D G3DSA:2.20.25.90 7 62 1.4E-13 T 13-10-2018 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 8 61 3.5E-10 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 Gene3D G3DSA:2.40.40.20 586 702 3.4E-37 T 13-10-2018 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 Gene3D G3DSA:3.40.228.10 151 350 4.9E-170 T 13-10-2018 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 Pfam PF01568 Molydopterin dinucleotide binding domain 589 696 1.5E-25 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 PIRSF PIRSF000144 61 468 6.5E-52 T 13-10-2018 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 PIRSF PIRSF000144 553 706 0.028 T 13-10-2018 TREPR_3099 480e5c1b4b9a873e5a8d1220a220abb2 732 SUPERFAMILY SSF53706 8 571 7.98E-185 T 13-10-2018 TREPR_1577 812b466dbc8b83c63e0cf38165f758c1 526 Pfam PF03065 Glycosyl hydrolase family 57 10 418 1.7E-26 T 13-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 TREPR_1577 812b466dbc8b83c63e0cf38165f758c1 526 Gene3D G3DSA:1.20.1430.10 415 526 3.0E-34 T 13-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TREPR_1577 812b466dbc8b83c63e0cf38165f758c1 526 Gene3D G3DSA:3.20.110.10 6 404 2.6E-116 T 13-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily TREPR_1577 812b466dbc8b83c63e0cf38165f758c1 526 SUPERFAMILY SSF88688 415 525 3.24E-31 T 13-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily TREPR_1577 812b466dbc8b83c63e0cf38165f758c1 526 SUPERFAMILY SSF88713 7 411 1.4E-80 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TREPR_1577 812b466dbc8b83c63e0cf38165f758c1 526 Pfam PF09210 Domain of unknown function (DUF1957) 427 522 5.6E-33 T 13-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TREPR_1743 cd17b88c4fedefef6fe7bcf799a5f38e 385 SUPERFAMILY SSF55120 140 364 7.2E-46 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1743 cd17b88c4fedefef6fe7bcf799a5f38e 385 SMART SM00363 69 126 2.4E-5 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1743 cd17b88c4fedefef6fe7bcf799a5f38e 385 Gene3D G3DSA:3.30.2350.10 134 346 8.6E-49 T 13-10-2018 TREPR_1743 cd17b88c4fedefef6fe7bcf799a5f38e 385 SUPERFAMILY SSF55174 69 120 3.34E-6 T 13-10-2018 TREPR_1743 cd17b88c4fedefef6fe7bcf799a5f38e 385 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 191 205 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1743 cd17b88c4fedefef6fe7bcf799a5f38e 385 Pfam PF00849 RNA pseudouridylate synthase 151 306 3.3E-27 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1743 cd17b88c4fedefef6fe7bcf799a5f38e 385 Gene3D G3DSA:3.10.290.10 57 123 6.7E-12 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TREPR_2709 7b86a6d85e3f93f692b8acb2242318e8 133 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 4 83 1.3E-9 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TREPR_2709 7b86a6d85e3f93f692b8acb2242318e8 133 Gene3D G3DSA:2.30.110.10 2 133 8.9E-32 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TREPR_2709 7b86a6d85e3f93f692b8acb2242318e8 133 SUPERFAMILY SSF50475 5 125 8.04E-17 T 13-10-2018 TREPR_1058 0ba5abe9602a0b0fd20358e488619097 405 Pfam PF01986 Domain of unknown function DUF123 286 374 2.0E-23 T 13-10-2018 IPR002837 Protein of unknown function DUF123 TREPR_1058 0ba5abe9602a0b0fd20358e488619097 405 Gene3D G3DSA:2.40.50.580 8 87 5.2E-15 T 13-10-2018 TREPR_1058 0ba5abe9602a0b0fd20358e488619097 405 Pfam PF03749 Sugar fermentation stimulation protein 17 209 1.9E-44 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein TREPR_1058 0ba5abe9602a0b0fd20358e488619097 405 Gene3D G3DSA:3.40.1350.60 91 223 1.9E-33 T 13-10-2018 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 Gene3D G3DSA:4.10.640.10 27 106 2.4E-30 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 54 104 1.0E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 24 106 22.848 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 SUPERFAMILY SSF46911 35 105 2.09E-27 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 TIGRFAM TIGR00165 S18: ribosomal protein bS18 39 106 3.0E-33 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 PRINTS PR00974 Ribosomal protein S18 family signature 79 93 1.6E-20 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 PRINTS PR00974 Ribosomal protein S18 family signature 93 103 1.6E-20 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 1.6E-20 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 PRINTS PR00974 Ribosomal protein S18 family signature 71 78 1.6E-20 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2683 8ae58d87098bba604283e98b6e09c613 106 Pfam PF01084 Ribosomal protein S18 51 101 7.9E-27 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0757 c794172d2ce76fc55a98adb9c8eb90b2 543 Pfam PF01957 NfeD-like C-terminal, partner-binding 477 536 2.3E-5 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain TREPR_0757 c794172d2ce76fc55a98adb9c8eb90b2 543 Gene3D G3DSA:2.40.50.140 476 542 3.1E-9 T 13-10-2018 TREPR_0757 c794172d2ce76fc55a98adb9c8eb90b2 543 SUPERFAMILY SSF52096 42 198 2.57E-16 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TREPR_0757 c794172d2ce76fc55a98adb9c8eb90b2 543 SUPERFAMILY SSF141322 476 536 8.89E-6 T 13-10-2018 TREPR_0402 9988971904371c9a3cf0e8081a48e300 506 Gene3D G3DSA:3.40.50.300 2 241 1.2E-57 T 13-10-2018 TREPR_0402 9988971904371c9a3cf0e8081a48e300 506 Gene3D G3DSA:3.40.50.300 262 506 3.0E-44 T 13-10-2018 TREPR_0402 9988971904371c9a3cf0e8081a48e300 506 Pfam PF00005 ABC transporter 274 427 1.8E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0402 9988971904371c9a3cf0e8081a48e300 506 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0402 9988971904371c9a3cf0e8081a48e300 506 SUPERFAMILY SSF52540 271 493 1.94E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0402 9988971904371c9a3cf0e8081a48e300 506 SUPERFAMILY SSF52540 6 232 8.7E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0402 9988971904371c9a3cf0e8081a48e300 506 SMART SM00382 31 222 1.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0402 9988971904371c9a3cf0e8081a48e300 506 SMART SM00382 282 476 1.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0402 9988971904371c9a3cf0e8081a48e300 506 Pfam PF00005 ABC transporter 22 174 4.6E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3525 837b48c70406fe19abbbc7fdb30b670d 714 Pfam PF12437 Glutamine synthetase type III N terminal 20 182 2.1E-74 T 13-10-2018 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TREPR_3525 837b48c70406fe19abbbc7fdb30b670d 714 Gene3D G3DSA:1.20.120.1560 572 713 3.9E-38 T 13-10-2018 TREPR_3525 837b48c70406fe19abbbc7fdb30b670d 714 SUPERFAMILY SSF55931 173 592 8.14E-75 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TREPR_3525 837b48c70406fe19abbbc7fdb30b670d 714 Pfam PF00120 Glutamine synthetase, catalytic domain 203 361 3.4E-23 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TREPR_3525 837b48c70406fe19abbbc7fdb30b670d 714 SMART SM01230 183 469 1.8E-45 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TREPR_3525 837b48c70406fe19abbbc7fdb30b670d 714 Gene3D G3DSA:3.30.590.10 192 407 1.1E-31 T 13-10-2018 TREPR_3525 837b48c70406fe19abbbc7fdb30b670d 714 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 328 343 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 TREPR_1230 33a128b5eec8fe57dd20199939188538 240 Gene3D G3DSA:1.20.120.220 75 238 3.7E-34 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1230 33a128b5eec8fe57dd20199939188538 240 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 238 13.218 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1230 33a128b5eec8fe57dd20199939188538 240 PRINTS PR00123 ATP synthase A subunit signature 218 233 5.8E-17 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1230 33a128b5eec8fe57dd20199939188538 240 PRINTS PR00123 ATP synthase A subunit signature 173 195 5.8E-17 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1230 33a128b5eec8fe57dd20199939188538 240 PRINTS PR00123 ATP synthase A subunit signature 82 98 5.8E-17 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1230 33a128b5eec8fe57dd20199939188538 240 Pfam PF00119 ATP synthase A chain 25 232 7.4E-45 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1230 33a128b5eec8fe57dd20199939188538 240 SUPERFAMILY SSF81336 76 232 2.75E-30 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_0858 c0632452a95772144517876f8334f4ff 121 Gene3D G3DSA:3.40.50.1000 2 119 6.7E-19 T 13-10-2018 IPR023214 HAD superfamily TREPR_0858 c0632452a95772144517876f8334f4ff 121 SUPERFAMILY SSF56784 6 110 1.39E-17 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_0858 c0632452a95772144517876f8334f4ff 121 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 105 5.8E-10 T 13-10-2018 TREPR_1961 ff53b76e1a2720d8fa428703268e9b2b 203 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 181 5.7E-34 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TREPR_1961 ff53b76e1a2720d8fa428703268e9b2b 203 SUPERFAMILY SSF52540 3 165 2.34E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1961 ff53b76e1a2720d8fa428703268e9b2b 203 Gene3D G3DSA:3.40.50.300 1 192 9.1E-39 T 13-10-2018 TREPR_1376 3c210fa35bf177681391b7e0f6202af9 310 SUPERFAMILY SSF161098 90 289 1.02E-22 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1376 3c210fa35bf177681391b7e0f6202af9 310 Gene3D G3DSA:1.10.3720.10 84 297 1.8E-27 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1376 3c210fa35bf177681391b7e0f6202af9 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 1.4E-41 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 PRINTS PR00980 Alanyl-tRNA synthetase signature 70 81 2.5E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 PRINTS PR00980 Alanyl-tRNA synthetase signature 303 316 2.5E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 2.5E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 PRINTS PR00980 Alanyl-tRNA synthetase signature 277 293 2.5E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 2.5E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 549 591 6.9E-15 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 SUPERFAMILY SSF55681 2 246 2.98E-76 T 13-10-2018 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 Gene3D G3DSA:3.30.930.10 1 242 4.9E-97 T 13-10-2018 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 443 2.1E-138 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 596 95.001 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 SUPERFAMILY SSF55186 458 594 6.54E-44 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 SUPERFAMILY SSF101353 247 446 5.62E-60 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 Gene3D G3DSA:3.30.54.20 520 573 6.2E-50 T 13-10-2018 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 Pfam PF01411 tRNA synthetases class II (A) 5 445 2.7E-141 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 Gene3D G3DSA:3.30.980.10 458 593 6.2E-50 T 13-10-2018 TREPR_0781 4eacd4b0616d8009e80fc6cb1fe1257b 596 SMART SM00863 549 592 3.7E-16 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TREPR_0145 b9f0686d07a82bc180bb4ed96fab04da 282 Gene3D G3DSA:1.10.150.80 204 278 4.4E-5 T 13-10-2018 TREPR_0145 b9f0686d07a82bc180bb4ed96fab04da 282 SUPERFAMILY SSF53098 2 183 2.28E-38 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_0145 b9f0686d07a82bc180bb4ed96fab04da 282 Gene3D G3DSA:3.30.420.10 2 194 8.4E-40 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_0145 b9f0686d07a82bc180bb4ed96fab04da 282 SUPERFAMILY SSF47819 216 251 5.05E-6 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TREPR_0145 b9f0686d07a82bc180bb4ed96fab04da 282 Pfam PF00570 HRDC domain 218 252 4.0E-5 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TREPR_0145 b9f0686d07a82bc180bb4ed96fab04da 282 SMART SM00474 4 175 1.0E-23 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TREPR_0145 b9f0686d07a82bc180bb4ed96fab04da 282 Pfam PF01612 3'-5' exonuclease 23 173 1.0E-21 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 SUPERFAMILY SSF55261 296 441 2.83E-23 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 Pfam PF01336 OB-fold nucleic acid binding domain 22 107 4.6E-14 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 SUPERFAMILY SSF55681 120 611 5.72E-102 T 13-10-2018 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 Pfam PF02938 GAD domain 338 428 4.1E-22 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 Gene3D G3DSA:3.30.1360.30 279 442 1.2E-180 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 SUPERFAMILY SSF50249 6 110 2.14E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 Gene3D G3DSA:2.40.50.140 1 112 6.0E-35 T 13-10-2018 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 5 612 32.632 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 585 3.0E-102 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 611 3.4E-212 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 227 4.8E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 PRINTS PR01042 Aspartyl-tRNA synthetase signature 502 518 4.8E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 209 4.8E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 PRINTS PR01042 Aspartyl-tRNA synthetase signature 546 560 4.8E-26 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3381 a853b66dfe822a52bdae86c96d5e5866 618 Gene3D G3DSA:3.30.930.10 123 609 1.2E-180 T 13-10-2018 TREPR_2334 a7b55d2b5846bdc261caf3c953166c7f 356 SMART SM00930 267 342 8.6E-20 T 13-10-2018 IPR018449 NIL domain TREPR_2334 a7b55d2b5846bdc261caf3c953166c7f 356 Gene3D G3DSA:3.30.70.260 252 344 3.4E-17 T 13-10-2018 TREPR_2334 a7b55d2b5846bdc261caf3c953166c7f 356 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2334 a7b55d2b5846bdc261caf3c953166c7f 356 SMART SM00382 31 219 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2334 a7b55d2b5846bdc261caf3c953166c7f 356 SUPERFAMILY SSF55021 253 342 4.01E-18 T 13-10-2018 TREPR_2334 a7b55d2b5846bdc261caf3c953166c7f 356 Gene3D G3DSA:3.40.50.300 1 244 2.0E-73 T 13-10-2018 TREPR_2334 a7b55d2b5846bdc261caf3c953166c7f 356 Pfam PF09383 NIL domain 270 340 1.2E-16 T 13-10-2018 IPR018449 NIL domain TREPR_2334 a7b55d2b5846bdc261caf3c953166c7f 356 SUPERFAMILY SSF52540 1 241 2.3E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2334 a7b55d2b5846bdc261caf3c953166c7f 356 Pfam PF00005 ABC transporter 22 170 1.2E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2373 02093c08f4b739db89c1310c9577826a 260 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 257 2.0E-114 T 13-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 TREPR_2373 02093c08f4b739db89c1310c9577826a 260 SUPERFAMILY SSF53448 1 258 8.97E-64 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2373 02093c08f4b739db89c1310c9577826a 260 Gene3D G3DSA:3.90.550.10 1 258 6.7E-68 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2373 02093c08f4b739db89c1310c9577826a 260 Pfam PF00483 Nucleotidyl transferase 2 211 4.8E-21 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 391 4.9E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 353 4.9E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 339 4.9E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 372 4.9E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 Gene3D G3DSA:3.30.565.10 247 401 1.8E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 SMART SM00387 288 394 7.8E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 SUPERFAMILY SSF55874 241 392 2.23E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 Gene3D G3DSA:1.10.287.130 144 244 4.2E-17 T 13-10-2018 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 32 148 8.8E-9 T 13-10-2018 IPR000014 PAS domain TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 Gene3D G3DSA:3.30.450.20 25 140 2.0E-15 T 13-10-2018 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 Pfam PF13426 PAS domain 43 141 7.8E-6 T 13-10-2018 IPR000014 PAS domain TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 SMART SM00388 157 246 0.005 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 SUPERFAMILY SSF55785 29 140 1.45E-9 T 13-10-2018 IPR035965 PAS domain superfamily TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 157 239 4.0E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 SUPERFAMILY SSF47384 147 242 8.24E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2228 76836ace2d84f81e719ea7cd96c3101b 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 392 1.4E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1322 65122407c6942e7550d8891d57f49750 260 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 100 259 2.5E-6 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 TREPR_1322 65122407c6942e7550d8891d57f49750 260 Gene3D G3DSA:3.90.850.10 1 260 6.3E-74 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TREPR_1322 65122407c6942e7550d8891d57f49750 260 SUPERFAMILY SSF56529 3 260 2.88E-66 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 TREPR_0246 3f1375b35953773abc00ec6301773378 452 Gene3D G3DSA:3.40.50.1980 298 429 2.7E-12 T 13-10-2018 TREPR_0246 3f1375b35953773abc00ec6301773378 452 Gene3D G3DSA:3.40.50.1980 155 267 9.4E-25 T 13-10-2018 TREPR_0246 3f1375b35953773abc00ec6301773378 452 SUPERFAMILY SSF53807 7 429 5.89E-73 T 13-10-2018 TREPR_0246 3f1375b35953773abc00ec6301773378 452 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 12 426 1.7E-56 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_0246 3f1375b35953773abc00ec6301773378 452 Gene3D G3DSA:3.40.50.1980 13 154 3.5E-28 T 13-10-2018 TREPR_0387 47546c114b4c86e6bcb354652fc48b9e 402 Gene3D G3DSA:3.40.50.1100 59 389 8.7E-185 T 13-10-2018 TREPR_0387 47546c114b4c86e6bcb354652fc48b9e 402 PIRSF PIRSF001413 1 402 5.1E-170 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_0387 47546c114b4c86e6bcb354652fc48b9e 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 7 396 50.714 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_0387 47546c114b4c86e6bcb354652fc48b9e 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 86 100 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_0387 47546c114b4c86e6bcb354652fc48b9e 402 Gene3D G3DSA:3.40.50.1100 15 211 8.7E-185 T 13-10-2018 TREPR_0387 47546c114b4c86e6bcb354652fc48b9e 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 12 395 1.2E-195 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_0387 47546c114b4c86e6bcb354652fc48b9e 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 383 3.1E-45 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TREPR_0387 47546c114b4c86e6bcb354652fc48b9e 402 SUPERFAMILY SSF53686 11 394 4.06E-143 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TREPR_2602 808f9f27ed55464b0e608086a87ca811 377 Gene3D G3DSA:3.40.50.2000 16 369 1.2E-55 T 13-10-2018 TREPR_2602 808f9f27ed55464b0e608086a87ca811 377 Pfam PF13439 Glycosyltransferase Family 4 15 174 3.9E-17 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TREPR_2602 808f9f27ed55464b0e608086a87ca811 377 Gene3D G3DSA:3.40.50.2000 172 355 1.2E-55 T 13-10-2018 TREPR_2602 808f9f27ed55464b0e608086a87ca811 377 Pfam PF00534 Glycosyl transferases group 1 196 353 3.9E-26 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_2602 808f9f27ed55464b0e608086a87ca811 377 SUPERFAMILY SSF53756 10 373 7.07E-71 T 13-10-2018 TREPR_0566 61828e4baec8d1c9888d2fa37ea7711d 353 Pfam PF13353 4Fe-4S single cluster domain 103 175 2.7E-5 T 13-10-2018 TREPR_0566 61828e4baec8d1c9888d2fa37ea7711d 353 PIRSF PIRSF004911 7 342 1.5E-104 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase TREPR_0566 61828e4baec8d1c9888d2fa37ea7711d 353 Pfam PF04055 Radical SAM superfamily 105 255 1.9E-7 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_0566 61828e4baec8d1c9888d2fa37ea7711d 353 Gene3D G3DSA:3.20.20.70 36 320 1.5E-85 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0566 61828e4baec8d1c9888d2fa37ea7711d 353 TIGRFAM TIGR00238 TIGR00238: KamA family protein 27 314 1.1E-63 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase TREPR_0566 61828e4baec8d1c9888d2fa37ea7711d 353 SUPERFAMILY SSF102114 90 310 1.96E-28 T 13-10-2018 TREPR_3054 91fb535c84203fd75dfcdf505c5acf0f 391 Gene3D G3DSA:3.40.640.10 54 291 4.3E-137 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3054 91fb535c84203fd75dfcdf505c5acf0f 391 SUPERFAMILY SSF53383 3 387 9.14E-113 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3054 91fb535c84203fd75dfcdf505c5acf0f 391 Pfam PF00155 Aminotransferase class I and II 39 383 1.9E-67 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TREPR_3054 91fb535c84203fd75dfcdf505c5acf0f 391 Gene3D G3DSA:3.90.1150.10 36 380 4.3E-137 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3054 91fb535c84203fd75dfcdf505c5acf0f 391 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 238 247 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 TREPR_3054 91fb535c84203fd75dfcdf505c5acf0f 391 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 18 383 3.2E-143 T 13-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 TREPR_3704 06c1daa7377d0936f529862c7d3d6ebf 489 Gene3D G3DSA:2.60.40.1180 398 482 6.6E-12 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta TREPR_3704 06c1daa7377d0936f529862c7d3d6ebf 489 Gene3D G3DSA:3.90.400.10 124 179 2.9E-80 T 13-10-2018 TREPR_3704 06c1daa7377d0936f529862c7d3d6ebf 489 SMART SM00642 31 394 1.4E-49 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TREPR_3704 06c1daa7377d0936f529862c7d3d6ebf 489 Gene3D G3DSA:3.20.20.80 28 368 2.9E-80 T 13-10-2018 TREPR_3704 06c1daa7377d0936f529862c7d3d6ebf 489 Pfam PF00128 Alpha amylase, catalytic domain 56 353 1.5E-42 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TREPR_3704 06c1daa7377d0936f529862c7d3d6ebf 489 SUPERFAMILY SSF51011 403 482 5.04E-8 T 13-10-2018 TREPR_3704 06c1daa7377d0936f529862c7d3d6ebf 489 SUPERFAMILY SSF51445 24 403 1.06E-77 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_3335 2155085f97f977d1a47dad0e08aea21b 185 Pfam PF03358 NADPH-dependent FMN reductase 4 132 3.8E-20 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TREPR_3335 2155085f97f977d1a47dad0e08aea21b 185 Gene3D G3DSA:3.40.50.360 2 181 5.2E-40 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_3335 2155085f97f977d1a47dad0e08aea21b 185 SUPERFAMILY SSF52218 1 178 1.5E-35 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_1482 9c3357bca3ac3aec15c961229869e3cc 123 ProSitePatterns PS00464 Ribosomal protein L22 signature. 91 115 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1482 9c3357bca3ac3aec15c961229869e3cc 123 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 8 118 24.412 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1482 9c3357bca3ac3aec15c961229869e3cc 123 SUPERFAMILY SSF54843 7 119 1.31E-35 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_1482 9c3357bca3ac3aec15c961229869e3cc 123 Pfam PF00237 Ribosomal protein L22p/L17e 13 115 8.8E-31 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 TREPR_1482 9c3357bca3ac3aec15c961229869e3cc 123 Gene3D G3DSA:3.90.470.10 7 123 2.0E-39 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_1482 9c3357bca3ac3aec15c961229869e3cc 123 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 13 115 4.1E-27 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0050 955f37c65bffc927feed9759f05b5298 117 Gene3D G3DSA:1.10.260.40 2 78 1.1E-15 T 13-10-2018 TREPR_0050 955f37c65bffc927feed9759f05b5298 117 Pfam PF13560 Helix-turn-helix domain 18 71 3.5E-7 T 13-10-2018 TREPR_0050 955f37c65bffc927feed9759f05b5298 117 SMART SM00530 17 72 8.6E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_0050 955f37c65bffc927feed9759f05b5298 117 SUPERFAMILY SSF47413 12 75 4.83E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1450 642999fdbb1a53aaea050dc2448acca0 193 Gene3D G3DSA:2.60.40.2480 40 193 1.6E-56 T 13-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily TREPR_1450 642999fdbb1a53aaea050dc2448acca0 193 PIRSF PIRSF017018 25 193 9.0E-55 T 13-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type TREPR_1450 642999fdbb1a53aaea050dc2448acca0 193 Pfam PF10634 Fe2+ transport protein 42 190 2.0E-55 T 13-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type TREPR_1502 2c5fe344f60d8d6a6c5a66c593e9c3dd 179 Pfam PF01196 Ribosomal protein L17 20 116 2.0E-31 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1502 2c5fe344f60d8d6a6c5a66c593e9c3dd 179 SUPERFAMILY SSF64263 1 119 1.28E-40 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1502 2c5fe344f60d8d6a6c5a66c593e9c3dd 179 TIGRFAM TIGR00059 L17: ribosomal protein bL17 11 117 1.5E-39 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1502 2c5fe344f60d8d6a6c5a66c593e9c3dd 179 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.248 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1502 2c5fe344f60d8d6a6c5a66c593e9c3dd 179 Gene3D G3DSA:3.90.1030.10 1 117 1.0E-39 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1104 f757c9c83b7605c9b40ad5fcb5fbce93 285 SUPERFAMILY SSF109604 10 273 8.46E-63 T 13-10-2018 TREPR_1104 f757c9c83b7605c9b40ad5fcb5fbce93 285 Pfam PF08668 HDOD domain 16 211 7.3E-53 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD TREPR_1104 f757c9c83b7605c9b40ad5fcb5fbce93 285 Gene3D G3DSA:1.10.3210.10 2 280 2.7E-69 T 13-10-2018 TREPR_1104 f757c9c83b7605c9b40ad5fcb5fbce93 285 SMART SM00471 106 245 7.6E-4 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 ProSitePatterns PS00785 5'-nucleotidase signature 1. 33 45 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 SUPERFAMILY SSF55816 298 489 1.83E-34 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 PRINTS PR01607 Apyrase family signature 31 49 9.6E-8 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 PRINTS PR01607 Apyrase family signature 206 229 9.6E-8 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 PRINTS PR01607 Apyrase family signature 181 198 9.6E-8 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 PRINTS PR01607 Apyrase family signature 234 254 9.6E-8 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 SUPERFAMILY SSF56300 33 300 1.08E-51 T 13-10-2018 TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 Gene3D G3DSA:3.90.780.10 304 493 7.9E-34 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 Pfam PF02872 5'-nucleotidase, C-terminal domain 306 441 5.0E-28 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 Gene3D G3DSA:3.60.21.10 26 299 2.5E-51 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_3569 4e5191489bdda923df3222d44dd33fa3 493 Pfam PF00149 Calcineurin-like phosphoesterase 34 145 2.7E-6 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_2648 d944439a90a9c52a1506db599e85aa61 192 SUPERFAMILY SSF56925 38 192 1.91E-7 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 Gene3D G3DSA:3.30.830.10 276 518 1.1E-61 T 13-10-2018 TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 SUPERFAMILY SSF63411 555 813 9.52E-46 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 Pfam PF05193 Peptidase M16 inactive domain 226 409 3.3E-19 T 13-10-2018 IPR007863 Peptidase M16, C-terminal TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 Pfam PF08367 Peptidase M16C associated 497 755 6.1E-55 T 13-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 Gene3D G3DSA:3.30.830.10 3 269 1.3E-74 T 13-10-2018 TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 Pfam PF00675 Insulinase (Peptidase family M16) 61 145 1.7E-6 T 13-10-2018 IPR011765 Peptidase M16, N-terminal TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 Gene3D G3DSA:3.30.830.10 528 1001 8.8E-108 T 13-10-2018 TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 SUPERFAMILY SSF63411 282 553 2.2E-48 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 SUPERFAMILY SSF63411 843 995 2.02E-19 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 Gene3D G3DSA:3.30.830.10 563 833 8.8E-108 T 13-10-2018 TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 SMART SM01264 496 758 1.8E-72 T 13-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 TREPR_1016 606d1390f988554579f46bcf60a573d4 1033 SUPERFAMILY SSF63411 15 277 2.35E-41 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TREPR_1307 5cec66f9e69365468fddafc27e744d17 190 SUPERFAMILY SSF117457 3 174 2.88E-63 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 TREPR_1307 5cec66f9e69365468fddafc27e744d17 190 Pfam PF05683 Fumarase C-terminus 7 174 3.0E-59 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 TREPR_1307 5cec66f9e69365468fddafc27e744d17 190 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 17 174 7.4E-54 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 TREPR_1307 5cec66f9e69365468fddafc27e744d17 190 Gene3D G3DSA:3.20.130.10 1 174 8.7E-71 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 TREPR_1540 9cb24ce3946d6da4e18a672e78cd4f1b 596 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 205 230 2.4E-5 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_1540 9cb24ce3946d6da4e18a672e78cd4f1b 596 Gene3D G3DSA:3.10.20.660 175 236 4.5E-8 T 13-10-2018 TREPR_1540 9cb24ce3946d6da4e18a672e78cd4f1b 596 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 177 218 3.7E-7 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_3811 4c6a1e41b9c331397dfb173cb7bee82b 325 Pfam PF01368 DHH family 18 157 1.0E-13 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_3811 4c6a1e41b9c331397dfb173cb7bee82b 325 Pfam PF02272 DHHA1 domain 186 310 1.6E-8 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TREPR_3811 4c6a1e41b9c331397dfb173cb7bee82b 325 SUPERFAMILY SSF64182 17 316 2.35E-55 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily TREPR_3811 4c6a1e41b9c331397dfb173cb7bee82b 325 Gene3D G3DSA:3.10.310.30 205 323 2.7E-23 T 13-10-2018 TREPR_3811 4c6a1e41b9c331397dfb173cb7bee82b 325 Gene3D G3DSA:3.90.1640.10 5 204 1.3E-49 T 13-10-2018 TREPR_2408 82edd0f28121faeb9f619fab8c23d7be 513 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 60 513 4.8E-132 T 13-10-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 TREPR_2408 82edd0f28121faeb9f619fab8c23d7be 513 Pfam PF13727 CoA-binding domain 122 267 6.1E-7 T 13-10-2018 TREPR_2408 82edd0f28121faeb9f619fab8c23d7be 513 Pfam PF02397 Bacterial sugar transferase 316 507 2.6E-64 T 13-10-2018 IPR003362 Bacterial sugar transferase TREPR_2408 82edd0f28121faeb9f619fab8c23d7be 513 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 63 513 3.8E-113 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TREPR_2408 82edd0f28121faeb9f619fab8c23d7be 513 Gene3D G3DSA:3.40.50.720 185 299 1.1E-13 T 13-10-2018 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 Gene3D G3DSA:1.20.272.10 263 374 1.2E-5 T 13-10-2018 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 SUPERFAMILY SSF48019 259 378 1.87E-12 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 Pfam PF13177 DNA polymerase III, delta subunit 36 191 4.2E-45 T 13-10-2018 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 SUPERFAMILY SSF52540 49 237 2.49E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 56 74 1.1E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 139 157 1.1E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 Gene3D G3DSA:3.40.50.300 28 192 1.0E-97 T 13-10-2018 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 Gene3D G3DSA:1.10.8.60 24 253 1.0E-97 T 13-10-2018 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 18 372 1.6E-129 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 250 382 4.1E-7 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 TREPR_0447 3520bfd0d4e8247e1163547dff9ab17c 654 SMART SM00382 52 194 5.5E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 Pfam PF07729 FCD domain 100 218 2.7E-18 T 13-10-2018 IPR011711 GntR, C-terminal TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 SUPERFAMILY SSF48008 99 227 2.41E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 SMART SM00345 15 74 1.1E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 4.3E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 4.3E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 SUPERFAMILY SSF46785 9 78 1.13E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 Gene3D G3DSA:1.20.120.530 96 229 9.7E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 Gene3D G3DSA:1.10.10.10 7 78 6.3E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 SMART SM00895 100 220 6.8E-20 T 13-10-2018 IPR011711 GntR, C-terminal TREPR_1614 111db6da8799a15a38bdeb0350198a4b 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.8E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_1995 272e5efa25aa8024a6169a5f8a59f5eb 326 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 326 72.827 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_1995 272e5efa25aa8024a6169a5f8a59f5eb 326 Gene3D G3DSA:3.30.43.10 4 99 9.0E-22 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TREPR_1995 272e5efa25aa8024a6169a5f8a59f5eb 326 SUPERFAMILY SSF56194 220 323 3.79E-29 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_1995 272e5efa25aa8024a6169a5f8a59f5eb 326 Gene3D G3DSA:3.30.465.10 112 236 1.0E-31 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TREPR_1995 272e5efa25aa8024a6169a5f8a59f5eb 326 SUPERFAMILY SSF56176 16 214 2.41E-31 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TREPR_1995 272e5efa25aa8024a6169a5f8a59f5eb 326 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 34 322 1.4E-64 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_1995 272e5efa25aa8024a6169a5f8a59f5eb 326 Pfam PF01565 FAD binding domain 62 177 7.4E-15 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TREPR_1995 272e5efa25aa8024a6169a5f8a59f5eb 326 Gene3D G3DSA:3.90.78.10 238 326 7.3E-28 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_1995 272e5efa25aa8024a6169a5f8a59f5eb 326 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 221 321 3.8E-23 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_2641 9e92c8dd52195055a16d896f3ed4a877 224 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 9 221 28.932 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TREPR_2641 9e92c8dd52195055a16d896f3ed4a877 224 Pfam PF02390 Putative methyltransferase 49 214 1.5E-50 T 13-10-2018 TREPR_2641 9e92c8dd52195055a16d896f3ed4a877 224 Gene3D G3DSA:3.40.50.150 15 223 2.1E-61 T 13-10-2018 TREPR_2641 9e92c8dd52195055a16d896f3ed4a877 224 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 38 217 2.0E-47 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TREPR_2641 9e92c8dd52195055a16d896f3ed4a877 224 SUPERFAMILY SSF53335 29 219 6.59E-27 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 Gene3D G3DSA:3.40.50.300 192 373 3.6E-65 T 13-10-2018 TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 40 648 35.854 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 Gene3D G3DSA:1.20.58.760 454 652 7.0E-68 T 13-10-2018 TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 SMART SM00382 236 375 1.6E-23 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 Pfam PF06480 FtsH Extracellular 43 144 3.0E-6 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 Gene3D G3DSA:1.10.8.60 374 451 7.8E-29 T 13-10-2018 TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 SUPERFAMILY SSF140990 454 648 2.09E-64 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 240 372 3.8E-44 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 SUPERFAMILY SSF52540 202 443 3.31E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 ProSitePatterns PS00674 AAA-protein family signature. 343 361 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 151 646 2.7E-218 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TREPR_0049 688eab0af79ea129f9e3c4dce45e05f5 653 Pfam PF01434 Peptidase family M41 434 643 4.6E-73 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 484 596 1.7E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 SUPERFAMILY SSF47384 355 438 2.55E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 Gene3D G3DSA:1.10.287.130 340 435 2.4E-26 T 13-10-2018 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 SMART SM00387 484 599 2.1E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 SUPERFAMILY SSF47226 798 904 3.24E-9 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 Gene3D G3DSA:3.40.50.2300 636 776 3.1E-33 T 13-10-2018 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 SMART SM00388 369 437 1.5E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 SMART SM00448 637 755 4.7E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 577 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 596 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 Pfam PF00512 His Kinase A (phospho-acceptor) domain 369 437 7.7E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 Gene3D G3DSA:1.20.120.160 800 906 9.8E-6 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 SUPERFAMILY SSF52172 637 760 9.11E-32 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 SUPERFAMILY SSF55874 426 595 1.17E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 Pfam PF16927 N-terminal 7TM region of histidine kinase 12 212 4.7E-20 T 13-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 Pfam PF00072 Response regulator receiver domain 639 755 4.4E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3504 e2231f86e13248bbb690bbf4ac009896 987 Gene3D G3DSA:3.30.565.10 436 598 6.5E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0803 71a27b9a978aac415e2db5c5a937268a 294 SUPERFAMILY SSF53335 100 276 5.63E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0803 71a27b9a978aac415e2db5c5a937268a 294 Gene3D G3DSA:3.40.50.150 74 257 6.9E-38 T 13-10-2018 TREPR_0803 71a27b9a978aac415e2db5c5a937268a 294 Pfam PF13489 Methyltransferase domain 98 251 5.8E-23 T 13-10-2018 TREPR_0702 ebdb23d1165fc5ae87299a611daa53e2 333 Pfam PF13566 Domain of unknown function (DUF4130 170 326 1.2E-32 T 13-10-2018 IPR025404 Domain of unknown function DUF4130 TREPR_0702 ebdb23d1165fc5ae87299a611daa53e2 333 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 170 326 3.7E-35 T 13-10-2018 IPR023875 DNA metabolism protein, putative TREPR_2708 9f29da45643fa7420696da89c1e5cd46 144 Gene3D G3DSA:1.10.10.10 1 143 4.6E-50 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2708 9f29da45643fa7420696da89c1e5cd46 144 Pfam PF02082 Transcriptional regulator 1 83 5.9E-24 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type TREPR_2708 9f29da45643fa7420696da89c1e5cd46 144 SUPERFAMILY SSF46785 3 139 9.53E-31 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 Gene3D G3DSA:2.40.50.140 1 92 4.2E-23 T 13-10-2018 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 Pfam PF01336 OB-fold nucleic acid binding domain 19 86 2.6E-12 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 SUPERFAMILY SSF50249 7 94 1.18E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 Hamap MF_02075 Aspartate--tRNA(Asp) ligase [aspS]. 1 436 36.067 T 13-10-2018 IPR004523 Aspartate-tRNA synthetase, type 2 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 PRINTS PR01042 Aspartyl-tRNA synthetase signature 351 367 2.2E-19 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 206 2.2E-19 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 PRINTS PR01042 Aspartyl-tRNA synthetase signature 176 188 2.2E-19 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 PRINTS PR01042 Aspartyl-tRNA synthetase signature 391 405 2.2E-19 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 SUPERFAMILY SSF55681 93 434 4.98E-70 T 13-10-2018 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 TIGRFAM TIGR00458 aspS_nondisc: aspartate--tRNA(Asn) ligase 5 436 3.3E-111 T 13-10-2018 IPR004523 Aspartate-tRNA synthetase, type 2 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 Gene3D G3DSA:3.30.930.10 97 436 3.4E-85 T 13-10-2018 TREPR_3639 043e249c3e8d3b08ed4e71d63a2e634e 436 Pfam PF00152 tRNA synthetases class II (D, K and N) 109 430 6.2E-73 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_0613 dad7391f837680d598ff9622c6ebf6aa 627 Pfam PF08439 Oligopeptidase F 127 182 3.0E-9 T 13-10-2018 IPR013647 Oligopeptidase F, N-terminal domain TREPR_0613 dad7391f837680d598ff9622c6ebf6aa 627 Gene3D G3DSA:1.20.140.70 30 182 3.3E-8 T 13-10-2018 TREPR_0613 dad7391f837680d598ff9622c6ebf6aa 627 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 17 623 5.5E-172 T 13-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 TREPR_0613 dad7391f837680d598ff9622c6ebf6aa 627 SUPERFAMILY SSF55486 15 607 3.36E-80 T 13-10-2018 TREPR_0613 dad7391f837680d598ff9622c6ebf6aa 627 Gene3D G3DSA:1.10.1370.20 233 626 1.9E-116 T 13-10-2018 TREPR_0613 dad7391f837680d598ff9622c6ebf6aa 627 Pfam PF01432 Peptidase family M3 351 606 3.2E-21 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 Gene3D G3DSA:2.40.50.100 116 192 1.2E-161 T 13-10-2018 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 SUPERFAMILY SSF52540 185 444 2.13E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 Gene3D G3DSA:3.40.50.300 74 440 1.2E-161 T 13-10-2018 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 SUPERFAMILY SSF50615 4 72 2.01E-11 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 219 440 2.9E-88 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 85 210 2.4E-31 T 13-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 Gene3D G3DSA:2.40.30.20 2 72 3.6E-23 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 SUPERFAMILY SSF47917 453 536 2.62E-20 T 13-10-2018 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 69 4.2E-10 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 2 598 48.682 T 13-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1152 75b1dba9d96437dbefb74ee7357c6cd9 604 Gene3D G3DSA:1.10.1140.10 441 602 3.4E-39 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_0641 48a26c86d3d54917fc920da3285f8a2d 244 SUPERFAMILY SSF89550 4 234 4.84E-58 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TREPR_0641 48a26c86d3d54917fc920da3285f8a2d 244 SMART SM00481 5 79 7.0E-11 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TREPR_0641 48a26c86d3d54917fc920da3285f8a2d 244 Gene3D G3DSA:3.20.20.140 3 242 8.9E-59 T 13-10-2018 TREPR_1284 04e02a2e220f5eb1593068d7443b7987 478 Gene3D G3DSA:3.30.70.360 184 301 2.0E-76 T 13-10-2018 TREPR_1284 04e02a2e220f5eb1593068d7443b7987 478 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 429 4.6E-73 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_1284 04e02a2e220f5eb1593068d7443b7987 478 Gene3D G3DSA:3.40.630.10 20 328 2.0E-76 T 13-10-2018 TREPR_1284 04e02a2e220f5eb1593068d7443b7987 478 PIRSF PIRSF037227 1 478 3.1E-187 T 13-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B TREPR_1284 04e02a2e220f5eb1593068d7443b7987 478 Pfam PF01546 Peptidase family M20/M25/M40 105 261 5.7E-6 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_1284 04e02a2e220f5eb1593068d7443b7987 478 SUPERFAMILY SSF55031 188 294 3.14E-19 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_1284 04e02a2e220f5eb1593068d7443b7987 478 SUPERFAMILY SSF53187 5 448 6.7E-47 T 13-10-2018 TREPR_1284 04e02a2e220f5eb1593068d7443b7987 478 Gene3D G3DSA:3.40.630.10 343 464 3.2E-14 T 13-10-2018 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 2.0E-23 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 204 222 2.0E-23 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 2.0E-23 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 235 256 2.0E-23 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 SUPERFAMILY SSF47323 356 475 4.05E-28 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 326 2.7E-97 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 477 34.737 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 SMART SM00840 367 421 0.0033 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 476 2.6E-145 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 Gene3D G3DSA:3.40.50.620 1 320 8.2E-130 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 SUPERFAMILY SSF52374 4 329 2.68E-84 T 13-10-2018 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 Gene3D G3DSA:1.20.120.1910 322 476 3.5E-34 T 13-10-2018 TREPR_1627 e34c5f319bacac6ce760dd6c2ccdb6e4 477 Pfam PF09190 DALR domain 367 413 7.8E-6 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TREPR_1959 12d8200bc730727cab5d2764a803d963 352 Gene3D G3DSA:3.40.50.300 6 333 9.7E-96 T 13-10-2018 TREPR_1959 12d8200bc730727cab5d2764a803d963 352 SUPERFAMILY SSF52540 9 258 5.93E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1959 12d8200bc730727cab5d2764a803d963 352 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1959 12d8200bc730727cab5d2764a803d963 352 SMART SM00382 43 236 1.3E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1959 12d8200bc730727cab5d2764a803d963 352 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 303 3.2E-19 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1959 12d8200bc730727cab5d2764a803d963 352 Pfam PF00005 ABC transporter 35 186 2.2E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1959 12d8200bc730727cab5d2764a803d963 352 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 325 2.8E-24 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 SUPERFAMILY SSF81301 251 433 1.62E-53 T 13-10-2018 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 Gene3D G3DSA:3.30.460.10 250 376 1.1E-41 T 13-10-2018 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 SMART SM00954 292 428 3.8E-63 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 Gene3D G3DSA:3.10.20.30 468 544 1.5E-28 T 13-10-2018 IPR012675 Beta-grasp domain superfamily TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 Pfam PF04607 Region found in RelA / SpoT proteins 292 427 7.5E-35 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 Pfam PF13328 HD domain 68 179 5.5E-31 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 Pfam PF02824 TGS domain 475 534 2.6E-18 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 SUPERFAMILY SSF109604 211 248 1.26E-8 T 13-10-2018 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 SUPERFAMILY SSF81271 462 534 5.01E-17 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 Gene3D G3DSA:1.10.3210.10 191 248 1.4E-9 T 13-10-2018 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 Gene3D G3DSA:1.10.3210.10 67 190 5.0E-30 T 13-10-2018 TREPR_1504 258b36feef1af4bd01faf38fc38d7755 755 SUPERFAMILY SSF109604 71 180 1.16E-29 T 13-10-2018 TREPR_2220 75899ab56ed02b8f2acd82f871fe3fa5 187 Pfam PF03358 NADPH-dependent FMN reductase 5 150 5.5E-29 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TREPR_2220 75899ab56ed02b8f2acd82f871fe3fa5 187 SUPERFAMILY SSF52218 5 177 1.19E-38 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_2220 75899ab56ed02b8f2acd82f871fe3fa5 187 Gene3D G3DSA:3.40.50.360 4 185 6.8E-41 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_2823 12ac8ef2103c5370a6a7a03a5b66deef 454 Pfam PF01554 MatE 253 409 2.2E-21 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2823 12ac8ef2103c5370a6a7a03a5b66deef 454 Pfam PF01554 MatE 26 188 4.5E-24 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2823 12ac8ef2103c5370a6a7a03a5b66deef 454 PIRSF PIRSF006603 1 453 9.6E-92 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2823 12ac8ef2103c5370a6a7a03a5b66deef 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 420 1.6E-61 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 Gene3D G3DSA:2.30.30.30 1 62 8.0E-14 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 121 2.2E-17 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 SUPERFAMILY SSF50104 1 62 1.71E-13 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 54 5.9E-14 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 Hamap MF_00141 Elongation factor P [efp]. 1 185 42.119 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 Pfam PF09285 Elongation factor P, C-terminal 130 184 6.8E-22 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 SMART SM01185 67 121 2.0E-16 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 SUPERFAMILY SSF50249 65 126 7.71E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 Gene3D G3DSA:2.40.50.140 129 185 2.6E-22 T 13-10-2018 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 SMART SM00841 129 184 6.6E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 PIRSF PIRSF005901 1 186 1.5E-60 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 2.6E-61 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 Gene3D G3DSA:2.40.50.140 64 126 1.3E-16 T 13-10-2018 TREPR_1457 5ec2eb4b337102020cd6ad972fcad7ca 187 SUPERFAMILY SSF50249 130 185 1.97E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1957 fbc6454f75b8b8efbb823d7498ce19e7 295 SUPERFAMILY SSF161098 91 276 4.95E-25 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1957 fbc6454f75b8b8efbb823d7498ce19e7 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 72 3.6E-9 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_1957 fbc6454f75b8b8efbb823d7498ce19e7 295 Gene3D G3DSA:1.10.3720.10 85 291 1.1E-19 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1957 fbc6454f75b8b8efbb823d7498ce19e7 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 292 1.0E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0548 1ef60e0bb09d337af57eca63f21dde19 656 Gene3D G3DSA:2.170.130.10 44 156 2.3E-16 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TREPR_0548 1ef60e0bb09d337af57eca63f21dde19 656 Pfam PF00593 TonB dependent receptor 209 649 3.7E-14 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TREPR_0548 1ef60e0bb09d337af57eca63f21dde19 656 Gene3D G3DSA:2.40.170.20 157 652 1.2E-30 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TREPR_0548 1ef60e0bb09d337af57eca63f21dde19 656 SUPERFAMILY SSF56935 50 652 7.33E-56 T 13-10-2018 TREPR_0548 1ef60e0bb09d337af57eca63f21dde19 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 147 1.3E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain TREPR_3764 a54d3dea1b9738fcbbd8de2e7623bd92 160 Pfam PF13673 Acetyltransferase (GNAT) domain 40 145 1.6E-13 T 13-10-2018 IPR000182 GNAT domain TREPR_3764 a54d3dea1b9738fcbbd8de2e7623bd92 160 SUPERFAMILY SSF55729 1 152 8.81E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_3764 a54d3dea1b9738fcbbd8de2e7623bd92 160 Gene3D G3DSA:3.40.630.30 2 152 1.2E-34 T 13-10-2018 TREPR_0435 4bb8c798d98e8f20407a2d7d6f19a581 256 SUPERFAMILY SSF52540 3 252 2.39E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0435 4bb8c798d98e8f20407a2d7d6f19a581 256 SMART SM00382 29 229 2.5E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0435 4bb8c798d98e8f20407a2d7d6f19a581 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 252 6.9E-10 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TREPR_0435 4bb8c798d98e8f20407a2d7d6f19a581 256 Pfam PF00005 ABC transporter 20 180 9.0E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0435 4bb8c798d98e8f20407a2d7d6f19a581 256 Gene3D G3DSA:3.40.50.300 2 253 4.6E-62 T 13-10-2018 TREPR_3416 2caf6d4c98ebe0f3e91e9abd03d5b055 245 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 19 236 2.6E-82 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TREPR_3416 2caf6d4c98ebe0f3e91e9abd03d5b055 245 Gene3D G3DSA:3.20.20.70 3 243 6.7E-95 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3416 2caf6d4c98ebe0f3e91e9abd03d5b055 245 SUPERFAMILY SSF51569 16 238 2.09E-81 T 13-10-2018 TREPR_3416 2caf6d4c98ebe0f3e91e9abd03d5b055 245 PIRSF PIRSF001357 14 243 2.8E-76 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TREPR_3416 2caf6d4c98ebe0f3e91e9abd03d5b055 245 Pfam PF01791 DeoC/LacD family aldolase 31 231 4.3E-17 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TREPR_3416 2caf6d4c98ebe0f3e91e9abd03d5b055 245 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 17 240 36.396 T 13-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 TREPR_3416 2caf6d4c98ebe0f3e91e9abd03d5b055 245 SMART SM01133 18 238 6.5E-97 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TREPR_2553 421b1f96c1cd302c5799bd33eb57aa03 340 PIRSF PIRSF027386 20 339 7.7E-83 T 13-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type TREPR_2553 421b1f96c1cd302c5799bd33eb57aa03 340 SUPERFAMILY SSF53850 74 321 1.45E-28 T 13-10-2018 TREPR_2553 421b1f96c1cd302c5799bd33eb57aa03 340 Pfam PF09084 NMT1/THI5 like 93 275 2.5E-11 T 13-10-2018 IPR015168 SsuA/THI5-like TREPR_2553 421b1f96c1cd302c5799bd33eb57aa03 340 Gene3D G3DSA:3.40.190.10 126 235 3.5E-77 T 13-10-2018 TREPR_2553 421b1f96c1cd302c5799bd33eb57aa03 340 Gene3D G3DSA:3.40.190.10 52 336 3.5E-77 T 13-10-2018 TREPR_2660 2fb829508bf86f32c0e8fc7a26662482 350 Gene3D G3DSA:2.70.98.10 1 349 4.5E-121 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TREPR_2660 2fb829508bf86f32c0e8fc7a26662482 350 PIRSF PIRSF005096 1 350 1.9E-118 T 13-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 TREPR_2660 2fb829508bf86f32c0e8fc7a26662482 350 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 175 184 - T 13-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 TREPR_2660 2fb829508bf86f32c0e8fc7a26662482 350 SUPERFAMILY SSF74650 4 347 3.33E-114 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TREPR_2660 2fb829508bf86f32c0e8fc7a26662482 350 Pfam PF01263 Aldose 1-epimerase 19 345 3.7E-86 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 TREPR_0587 edc1c665571fe959f2e2c1a2fcacceda 340 Pfam PF00294 pfkB family carbohydrate kinase 1 310 7.8E-33 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB TREPR_0587 edc1c665571fe959f2e2c1a2fcacceda 340 Gene3D G3DSA:3.40.1190.20 1 340 1.1E-137 T 13-10-2018 IPR029056 Ribokinase-like TREPR_0587 edc1c665571fe959f2e2c1a2fcacceda 340 SUPERFAMILY SSF53613 1 328 4.68E-81 T 13-10-2018 IPR029056 Ribokinase-like TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 323 5.2E-17 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 1.9E-32 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.9E-32 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 1.9E-32 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.9E-32 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 Gene3D G3DSA:3.40.1550.10 45 231 7.7E-67 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 SUPERFAMILY SSF101801 250 325 3.92E-13 T 13-10-2018 IPR036429 SpoA-like superfamily TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 323 7.8E-114 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 SUPERFAMILY SSF103039 45 230 6.89E-30 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 PIRSF PIRSF002888 1 334 3.1E-113 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 Pfam PF02154 Flagellar motor switch protein FliM 39 229 2.3E-82 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_2856 25d5891fbfd3bd2aa8a53b1c70161bd0 343 Gene3D G3DSA:2.30.330.10 241 333 5.4E-6 T 13-10-2018 IPR036429 SpoA-like superfamily TREPR_0453 4c749a60077524ded7b2d545da960f69 325 SUPERFAMILY SSF51395 18 323 1.41E-72 T 13-10-2018 TREPR_0453 4c749a60077524ded7b2d545da960f69 325 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 100 118 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TREPR_0453 4c749a60077524ded7b2d545da960f69 325 Gene3D G3DSA:1.10.1200.80 262 324 5.4E-9 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 TREPR_0453 4c749a60077524ded7b2d545da960f69 325 Gene3D G3DSA:3.20.20.70 14 260 3.8E-73 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0453 4c749a60077524ded7b2d545da960f69 325 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 9 323 5.6E-102 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 TREPR_0453 4c749a60077524ded7b2d545da960f69 325 PIRSF PIRSF006621 7 324 5.5E-81 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TREPR_0453 4c749a60077524ded7b2d545da960f69 325 Pfam PF01207 Dihydrouridine synthase (Dus) 20 314 2.4E-77 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TREPR_2376 a7e26ba0f3a2e976fe734d29b330a5a9 179 Gene3D G3DSA:2.60.120.10 1 172 2.9E-56 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_2376 a7e26ba0f3a2e976fe734d29b330a5a9 179 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 173 4.0E-49 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TREPR_2376 a7e26ba0f3a2e976fe734d29b330a5a9 179 SUPERFAMILY SSF51182 4 177 2.18E-51 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_2376 a7e26ba0f3a2e976fe734d29b330a5a9 179 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 7 168 9.0E-43 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TREPR_3716 7500d0f0c4b4ffd9ec0b64e2315f5685 390 SUPERFAMILY SSF69572 10 352 2.09E-104 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TREPR_3716 7500d0f0c4b4ffd9ec0b64e2315f5685 390 Gene3D G3DSA:3.40.50.720 14 264 1.4E-94 T 13-10-2018 TREPR_3716 7500d0f0c4b4ffd9ec0b64e2315f5685 390 SMART SM00450 289 385 1.9E-17 T 13-10-2018 IPR001763 Rhodanese-like domain TREPR_3716 7500d0f0c4b4ffd9ec0b64e2315f5685 390 Gene3D G3DSA:3.40.250.10 285 383 3.8E-20 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily TREPR_3716 7500d0f0c4b4ffd9ec0b64e2315f5685 390 Pfam PF00899 ThiF family 22 256 8.5E-66 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TREPR_3716 7500d0f0c4b4ffd9ec0b64e2315f5685 390 Pfam PF00581 Rhodanese-like domain 289 381 1.3E-7 T 13-10-2018 IPR001763 Rhodanese-like domain TREPR_3284 acbe670b4dfb1089f731316458963686 309 SUPERFAMILY SSF46785 7 77 2.78E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_3284 acbe670b4dfb1089f731316458963686 309 SUPERFAMILY SSF53850 115 298 1.81E-8 T 13-10-2018 TREPR_3284 acbe670b4dfb1089f731316458963686 309 Gene3D G3DSA:1.10.10.10 2 81 1.2E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3284 acbe670b4dfb1089f731316458963686 309 Gene3D G3DSA:3.40.190.10 167 256 4.4E-6 T 13-10-2018 TREPR_3284 acbe670b4dfb1089f731316458963686 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 58 2.1E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_3284 acbe670b4dfb1089f731316458963686 309 Gene3D G3DSA:3.40.190.10 115 166 4.4E-6 T 13-10-2018 TREPR_3284 acbe670b4dfb1089f731316458963686 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 36 2.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_3284 acbe670b4dfb1089f731316458963686 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 15 26 2.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_3284 acbe670b4dfb1089f731316458963686 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 2.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_0485 63d1c39dc7f87f66c0e218ed0d4c5432 628 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 232 241 - T 13-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 TREPR_0485 63d1c39dc7f87f66c0e218ed0d4c5432 628 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 60 243 7.2E-11 T 13-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 TREPR_0485 63d1c39dc7f87f66c0e218ed0d4c5432 628 Gene3D G3DSA:2.60.40.1180 529 627 6.7E-12 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta TREPR_0485 63d1c39dc7f87f66c0e218ed0d4c5432 628 SUPERFAMILY SSF51445 6 523 1.28E-45 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Gene3D G3DSA:1.10.287.130 400 479 1.1E-23 T 13-10-2018 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Gene3D G3DSA:3.30.450.40 226 399 2.5E-16 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 SUPERFAMILY SSF55874 466 637 5.76E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Pfam PF01590 GAF domain 253 389 1.8E-5 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Pfam PF00072 Response regulator receiver domain 809 924 4.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Pfam PF00072 Response regulator receiver domain 661 780 8.0E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Gene3D G3DSA:3.40.50.2300 654 803 3.5E-29 T 13-10-2018 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Gene3D G3DSA:3.30.565.10 480 642 2.3E-51 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 6.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 6.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 6.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 594 6.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 SUPERFAMILY SSF47384 400 478 4.51E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Gene3D G3DSA:3.40.50.12740 806 931 1.4E-39 T 13-10-2018 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 SMART SM00388 412 477 2.9E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 SMART SM00387 524 641 2.4E-40 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 SUPERFAMILY SSF52172 657 786 4.55E-26 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 640 9.1E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 SMART SM00448 807 924 5.0E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 SMART SM00448 659 781 6.8E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 SUPERFAMILY SSF55781 232 397 2.84E-14 T 13-10-2018 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 Pfam PF00512 His Kinase A (phospho-acceptor) domain 413 476 6.7E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2451 8e6ec236f467f1f12a8ac6090b5f53b8 931 SUPERFAMILY SSF52172 805 929 2.56E-34 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3629 1034d9020ede4430cb67b73f99452ab0 852 Pfam PF04851 Type III restriction enzyme, res subunit 194 346 3.4E-34 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TREPR_3629 1034d9020ede4430cb67b73f99452ab0 852 Gene3D G3DSA:3.90.1570.30 1 142 3.6E-22 T 13-10-2018 TREPR_3629 1034d9020ede4430cb67b73f99452ab0 852 SUPERFAMILY SSF52540 184 350 3.22E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3629 1034d9020ede4430cb67b73f99452ab0 852 SUPERFAMILY SSF52540 309 596 3.08E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3629 1034d9020ede4430cb67b73f99452ab0 852 SMART SM00487 190 368 2.7E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_3629 1034d9020ede4430cb67b73f99452ab0 852 Gene3D G3DSA:3.40.50.300 175 359 2.0E-39 T 13-10-2018 TREPR_3629 1034d9020ede4430cb67b73f99452ab0 852 Gene3D G3DSA:3.40.50.300 394 651 5.6E-42 T 13-10-2018 TREPR_0229 da35f18856fcbb2a630a897e4b39ab7c 701 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 281 698 1.7E-141 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0229 da35f18856fcbb2a630a897e4b39ab7c 701 Gene3D G3DSA:3.40.640.10 275 562 8.9E-104 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0229 da35f18856fcbb2a630a897e4b39ab7c 701 Gene3D G3DSA:3.30.70.20 171 233 1.2E-5 T 13-10-2018 TREPR_0229 da35f18856fcbb2a630a897e4b39ab7c 701 SUPERFAMILY SSF53383 278 697 8.38E-124 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0229 da35f18856fcbb2a630a897e4b39ab7c 701 SUPERFAMILY SSF54862 173 232 9.63E-10 T 13-10-2018 TREPR_0229 da35f18856fcbb2a630a897e4b39ab7c 701 Gene3D G3DSA:3.90.1150.10 566 701 4.6E-45 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0229 da35f18856fcbb2a630a897e4b39ab7c 701 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 279 698 1.8E-194 T 13-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 TREPR_0229 da35f18856fcbb2a630a897e4b39ab7c 701 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 474 488 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0229 da35f18856fcbb2a630a897e4b39ab7c 701 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 176 187 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1955 a3a2c319eee8cb2fa0278a94eaf94614 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 96 465 2.0E-65 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_1955 a3a2c319eee8cb2fa0278a94eaf94614 537 SUPERFAMILY SSF53850 52 532 1.36E-92 T 13-10-2018 TREPR_1955 a3a2c319eee8cb2fa0278a94eaf94614 537 Gene3D G3DSA:3.10.105.10 300 512 1.5E-82 T 13-10-2018 TREPR_1955 a3a2c319eee8cb2fa0278a94eaf94614 537 PIRSF PIRSF002741 17 535 2.0E-62 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_1955 a3a2c319eee8cb2fa0278a94eaf94614 537 Gene3D G3DSA:3.40.190.10 212 521 1.5E-82 T 13-10-2018 TREPR_1955 a3a2c319eee8cb2fa0278a94eaf94614 537 Gene3D G3DSA:3.90.76.10 64 211 1.5E-82 T 13-10-2018 TREPR_3012 b5815d34a70d2fdd6fbb11dac42696c1 384 Pfam PF01339 CheB methylesterase 197 376 9.6E-59 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TREPR_3012 b5815d34a70d2fdd6fbb11dac42696c1 384 SMART SM00448 5 121 3.0E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3012 b5815d34a70d2fdd6fbb11dac42696c1 384 PIRSF PIRSF000876 2 384 1.1E-126 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TREPR_3012 b5815d34a70d2fdd6fbb11dac42696c1 384 Gene3D G3DSA:3.40.50.2300 3 128 1.1E-26 T 13-10-2018 TREPR_3012 b5815d34a70d2fdd6fbb11dac42696c1 384 Gene3D G3DSA:3.40.50.180 187 384 1.8E-68 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal TREPR_3012 b5815d34a70d2fdd6fbb11dac42696c1 384 SUPERFAMILY SSF52738 194 380 5.23E-65 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal TREPR_3012 b5815d34a70d2fdd6fbb11dac42696c1 384 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 381 36.298 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TREPR_3012 b5815d34a70d2fdd6fbb11dac42696c1 384 SUPERFAMILY SSF52172 5 111 5.55E-26 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3012 b5815d34a70d2fdd6fbb11dac42696c1 384 Pfam PF00072 Response regulator receiver domain 7 111 6.7E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2911 cf74bf05de523a52141bb9592ff80d87 354 SUPERFAMILY SSF51445 141 350 1.29E-30 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_2911 cf74bf05de523a52141bb9592ff80d87 354 Gene3D G3DSA:3.10.50.10 262 313 1.7E-49 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily TREPR_2911 cf74bf05de523a52141bb9592ff80d87 354 Gene3D G3DSA:3.20.20.80 87 348 1.7E-49 T 13-10-2018 TREPR_2911 cf74bf05de523a52141bb9592ff80d87 354 Pfam PF00704 Glycosyl hydrolases family 18 150 341 3.3E-21 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 TREPR_2911 cf74bf05de523a52141bb9592ff80d87 354 SMART SM00636 65 342 1.3E-6 T 13-10-2018 IPR011583 Chitinase II GO:0008061 TREPR_2506 4e0596d206ca5d70d48417b8912c0fd0 227 Pfam PF08348 YheO-like PAS domain 11 118 8.1E-34 T 13-10-2018 IPR013559 YheO-like TREPR_2506 4e0596d206ca5d70d48417b8912c0fd0 227 Pfam PF13309 HTH domain 144 204 3.4E-17 T 13-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain TREPR_2506 4e0596d206ca5d70d48417b8912c0fd0 227 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 14 111 5.0E-15 T 13-10-2018 IPR013559 YheO-like TREPR_0017 d10b9335fb4b1430b7cdbb814ded9cd3 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 125 203 2.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_0017 d10b9335fb4b1430b7cdbb814ded9cd3 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 208 9.3E-11 T 13-10-2018 TREPR_0017 d10b9335fb4b1430b7cdbb814ded9cd3 224 Gene3D G3DSA:3.40.50.1000 14 211 1.0E-15 T 13-10-2018 IPR023214 HAD superfamily TREPR_0017 d10b9335fb4b1430b7cdbb814ded9cd3 224 SUPERFAMILY SSF56784 11 211 1.79E-17 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_0017 d10b9335fb4b1430b7cdbb814ded9cd3 224 Gene3D G3DSA:1.10.150.520 26 109 1.0E-15 T 13-10-2018 TREPR_3563 fc9379ec8140ebf48ef681ec437a0e04 558 SUPERFAMILY SSF109755 342 555 5.62E-18 T 13-10-2018 TREPR_3563 fc9379ec8140ebf48ef681ec437a0e04 558 Gene3D G3DSA:1.20.58.220 345 558 1.5E-7 T 13-10-2018 IPR038078 PhoU-like domain superfamily TREPR_3563 fc9379ec8140ebf48ef681ec437a0e04 558 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 322 1.5E-85 T 13-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 TREPR_3563 fc9379ec8140ebf48ef681ec437a0e04 558 Pfam PF02690 Na+/Pi-cotransporter 16 154 4.0E-49 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TREPR_3563 fc9379ec8140ebf48ef681ec437a0e04 558 Pfam PF02690 Na+/Pi-cotransporter 179 254 1.8E-10 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TREPR_2319 a2021f09443ef11cb586eae1383c012e 366 Gene3D G3DSA:1.10.8.1150 65 133 8.5E-8 T 13-10-2018 TREPR_2319 a2021f09443ef11cb586eae1383c012e 366 Pfam PF02618 YceG-like family 69 355 1.1E-68 T 13-10-2018 IPR003770 Endolytic murein transglycosylase TREPR_2319 a2021f09443ef11cb586eae1383c012e 366 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 17 365 29.83 T 13-10-2018 IPR003770 Endolytic murein transglycosylase TREPR_2319 a2021f09443ef11cb586eae1383c012e 366 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 59 364 2.6E-67 T 13-10-2018 IPR003770 Endolytic murein transglycosylase TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 Gene3D G3DSA:3.10.50.40 214 356 1.9E-45 T 13-10-2018 TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 SUPERFAMILY SSF54534 151 355 1.06E-42 T 13-10-2018 TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 SUPERFAMILY SSF50891 50 200 8.77E-55 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 Gene3D G3DSA:2.40.100.10 47 196 1.4E-59 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 92 109 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 50 189 1.3E-46 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 165 180 1.7E-31 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 63 78 1.7E-31 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 1.7E-31 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 164 1.7E-31 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 109 1.7E-31 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TREPR_0450 20bec463ffcbcf845d0fbb0a73fd102c 356 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 263 353 2.8E-29 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TREPR_3137 924b6bb608fc516e266f83be1ad27679 213 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 11 209 18.969 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TREPR_3137 924b6bb608fc516e266f83be1ad27679 213 SUPERFAMILY SSF52540 11 185 3.58E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3137 924b6bb608fc516e266f83be1ad27679 213 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 13 184 2.2E-29 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TREPR_3137 924b6bb608fc516e266f83be1ad27679 213 Pfam PF01121 Dephospho-CoA kinase 13 169 2.5E-28 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TREPR_3137 924b6bb608fc516e266f83be1ad27679 213 Gene3D G3DSA:3.40.50.300 1 188 6.4E-44 T 13-10-2018 TREPR_3136 d73769cbdcd2cbafc477c4532b2b6ea1 458 Gene3D G3DSA:1.20.1250.20 46 443 2.1E-41 T 13-10-2018 TREPR_3136 d73769cbdcd2cbafc477c4532b2b6ea1 458 SUPERFAMILY SSF103473 47 445 8.76E-46 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_3136 d73769cbdcd2cbafc477c4532b2b6ea1 458 Pfam PF07690 Major Facilitator Superfamily 60 410 3.1E-30 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TREPR_2961 376364cab5b798eca23c99fa12c5a97d 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 120 1.5E-51 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 TREPR_2961 376364cab5b798eca23c99fa12c5a97d 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 TREPR_2961 376364cab5b798eca23c99fa12c5a97d 125 Gene3D G3DSA:3.30.1330.40 1 123 5.0E-51 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TREPR_2961 376364cab5b798eca23c99fa12c5a97d 125 Pfam PF01042 Endoribonuclease L-PSP 7 120 1.8E-43 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 TREPR_2961 376364cab5b798eca23c99fa12c5a97d 125 SUPERFAMILY SSF55298 2 121 6.44E-43 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TREPR_2930 f966f8a630eb506cc12fd3199a27b08c 718 SUPERFAMILY SSF90123 20 462 7.85E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_2930 f966f8a630eb506cc12fd3199a27b08c 718 Gene3D G3DSA:1.20.1560.10 6 82 5.9E-7 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_2930 f966f8a630eb506cc12fd3199a27b08c 718 Gene3D G3DSA:1.20.1560.10 174 466 2.3E-70 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_2930 f966f8a630eb506cc12fd3199a27b08c 718 Pfam PF00664 ABC transporter transmembrane region 207 434 8.4E-43 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TREPR_2930 f966f8a630eb506cc12fd3199a27b08c 718 ProSitePatterns PS00211 ABC transporters family signature. 616 630 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2930 f966f8a630eb506cc12fd3199a27b08c 718 Gene3D G3DSA:3.40.50.300 476 717 4.4E-84 T 13-10-2018 TREPR_2930 f966f8a630eb506cc12fd3199a27b08c 718 Pfam PF00005 ABC transporter 496 644 4.1E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2930 f966f8a630eb506cc12fd3199a27b08c 718 SMART SM00382 505 690 5.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2930 f966f8a630eb506cc12fd3199a27b08c 718 SUPERFAMILY SSF52540 475 715 1.93E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2227 7083825231a1a3a1fa0acb2801c4631a 466 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 428 4.2E-96 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 TREPR_2227 7083825231a1a3a1fa0acb2801c4631a 466 Gene3D G3DSA:1.20.1250.20 267 465 5.6E-20 T 13-10-2018 TREPR_2227 7083825231a1a3a1fa0acb2801c4631a 466 Gene3D G3DSA:1.20.1250.20 14 195 2.4E-35 T 13-10-2018 TREPR_2227 7083825231a1a3a1fa0acb2801c4631a 466 SUPERFAMILY SSF103473 7 462 1.83E-59 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_2227 7083825231a1a3a1fa0acb2801c4631a 466 Pfam PF07690 Major Facilitator Superfamily 23 415 5.8E-45 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TREPR_0448 cdddfc3f3d79ac95798a67802c35dc48 121 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 3.1E-26 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TREPR_0448 cdddfc3f3d79ac95798a67802c35dc48 121 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 100 3.8E-21 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TREPR_0448 cdddfc3f3d79ac95798a67802c35dc48 121 PIRSF PIRSF004555 1 112 1.7E-27 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TREPR_0448 cdddfc3f3d79ac95798a67802c35dc48 121 SUPERFAMILY SSF82607 9 100 3.01E-23 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily TREPR_0448 cdddfc3f3d79ac95798a67802c35dc48 121 Gene3D G3DSA:3.30.1310.10 2 110 3.3E-30 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily TREPR_0448 cdddfc3f3d79ac95798a67802c35dc48 121 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 98 17.039 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TREPR_3267 e20ef02cad409a6c2a89a5ef6c44ff92 310 Pfam PF00005 ABC transporter 36 177 5.1E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3267 e20ef02cad409a6c2a89a5ef6c44ff92 310 SUPERFAMILY SSF52540 30 243 5.94E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3267 e20ef02cad409a6c2a89a5ef6c44ff92 310 SMART SM00382 44 226 1.1E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3267 e20ef02cad409a6c2a89a5ef6c44ff92 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 290 6.7E-11 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_3267 e20ef02cad409a6c2a89a5ef6c44ff92 310 Gene3D G3DSA:3.40.50.300 3 310 3.7E-55 T 13-10-2018 TREPR_3267 e20ef02cad409a6c2a89a5ef6c44ff92 310 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 307 3.9E-12 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_2313 76dcad077bceb594fd744d9ef0b02c01 216 SUPERFAMILY SSF48150 36 200 9.94E-33 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TREPR_2313 76dcad077bceb594fd744d9ef0b02c01 216 SMART SM00478 47 201 6.4E-6 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TREPR_2313 76dcad077bceb594fd744d9ef0b02c01 216 Gene3D G3DSA:1.10.340.30 35 146 2.8E-68 T 13-10-2018 TREPR_2313 76dcad077bceb594fd744d9ef0b02c01 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 181 4.4E-9 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TREPR_2313 76dcad077bceb594fd744d9ef0b02c01 216 Gene3D G3DSA:1.10.1670.40 8 195 2.8E-68 T 13-10-2018 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 Gene3D G3DSA:3.40.50.12740 17 222 5.6E-40 T 13-10-2018 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 SMART SM00421 166 222 1.5E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 199 211 1.2E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 183 1.2E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 199 1.2E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 Pfam PF00072 Response regulator receiver domain 19 142 8.8E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 SMART SM00448 16 141 1.4E-9 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 168 220 1.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 SUPERFAMILY SSF46894 161 220 1.8E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_2483 fdc7e24436a26dfbe8a2efa94e8e7cc4 222 SUPERFAMILY SSF52172 17 153 9.25E-19 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3606 5559bc165b1576021585e0ed41977ebe 181 Pfam PF02915 Rubrerythrin 61 119 8.3E-10 T 13-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 TREPR_3606 5559bc165b1576021585e0ed41977ebe 181 Gene3D G3DSA:2.20.28.10 1 37 3.0E-15 T 13-10-2018 TREPR_3606 5559bc165b1576021585e0ed41977ebe 181 SUPERFAMILY SSF47240 57 179 1.08E-29 T 13-10-2018 IPR009078 Ferritin-like superfamily TREPR_3606 5559bc165b1576021585e0ed41977ebe 181 SUPERFAMILY SSF57802 1 36 3.03E-11 T 13-10-2018 TREPR_3606 5559bc165b1576021585e0ed41977ebe 181 Gene3D G3DSA:1.20.1260.10 53 178 2.8E-24 T 13-10-2018 IPR012347 Ferritin-like TREPR_0264 b6c33c216040512e0d9f2d9694bca843 434 TIGRFAM TIGR00260 thrC: threonine synthase 78 400 6.7E-60 T 13-10-2018 IPR004450 Threonine synthase-like TREPR_0264 b6c33c216040512e0d9f2d9694bca843 434 Gene3D G3DSA:3.40.50.1100 103 406 2.0E-109 T 13-10-2018 TREPR_0264 b6c33c216040512e0d9f2d9694bca843 434 SUPERFAMILY SSF53686 1 432 2.59E-101 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TREPR_0264 b6c33c216040512e0d9f2d9694bca843 434 Gene3D G3DSA:3.40.50.1100 86 400 2.0E-109 T 13-10-2018 TREPR_0264 b6c33c216040512e0d9f2d9694bca843 434 Pfam PF14821 Threonine synthase N terminus 2 67 5.2E-12 T 13-10-2018 IPR029144 Threonine synthase, N-terminal TREPR_0264 b6c33c216040512e0d9f2d9694bca843 434 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 100 383 2.1E-14 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TREPR_0264 b6c33c216040512e0d9f2d9694bca843 434 Gene3D G3DSA:3.90.1380.10 1 84 3.2E-13 T 13-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily TREPR_0469 50525c32766620fe78334db95b9c94a7 279 Gene3D G3DSA:3.90.190.10 15 278 3.3E-56 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like TREPR_0469 50525c32766620fe78334db95b9c94a7 279 Pfam PF13350 Tyrosine phosphatase family 14 278 1.3E-55 T 13-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type TREPR_0469 50525c32766620fe78334db95b9c94a7 279 SUPERFAMILY SSF52799 14 278 9.2E-44 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like TREPR_0469 50525c32766620fe78334db95b9c94a7 279 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 168 178 - T 13-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 TREPR_0518 e44c2cc603216b2a9ebedb1c9f79f59c 655 Pfam PF00593 TonB dependent receptor 228 654 1.6E-27 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TREPR_0518 e44c2cc603216b2a9ebedb1c9f79f59c 655 SUPERFAMILY SSF56935 32 654 3.26E-77 T 13-10-2018 TREPR_0518 e44c2cc603216b2a9ebedb1c9f79f59c 655 Gene3D G3DSA:2.40.170.20 221 655 1.3E-43 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TREPR_0518 e44c2cc603216b2a9ebedb1c9f79f59c 655 Gene3D G3DSA:2.170.130.10 29 152 8.4E-31 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TREPR_0518 e44c2cc603216b2a9ebedb1c9f79f59c 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 147 6.5E-19 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain TREPR_1626 c600137a19efb29cad7ab2c37a124726 184 Pfam PF04542 Sigma-70 region 2 18 84 2.2E-13 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_1626 c600137a19efb29cad7ab2c37a124726 184 Gene3D G3DSA:1.10.1740.10 8 87 5.8E-16 T 13-10-2018 TREPR_1626 c600137a19efb29cad7ab2c37a124726 184 Pfam PF08281 Sigma-70, region 4 115 166 1.0E-16 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TREPR_1626 c600137a19efb29cad7ab2c37a124726 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 167 5.1E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_1626 c600137a19efb29cad7ab2c37a124726 184 SUPERFAMILY SSF88659 108 170 8.41E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_1626 c600137a19efb29cad7ab2c37a124726 184 SUPERFAMILY SSF88946 9 96 3.14E-18 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_1626 c600137a19efb29cad7ab2c37a124726 184 Gene3D G3DSA:1.10.10.10 92 175 7.2E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3422 6e329818044ca43aea1b68ded2584770 76 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3422 6e329818044ca43aea1b68ded2584770 76 Gene3D G3DSA:3.30.70.20 1 70 1.4E-13 T 13-10-2018 TREPR_3422 6e329818044ca43aea1b68ded2584770 76 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 14 25 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3422 6e329818044ca43aea1b68ded2584770 76 Pfam PF13237 4Fe-4S dicluster domain 6 62 5.9E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3422 6e329818044ca43aea1b68ded2584770 76 SUPERFAMILY SSF54862 3 69 1.4E-15 T 13-10-2018 TREPR_0407 d73be5f02b17279bfab4bef6a99b3216 316 SMART SM00861 4 169 1.6E-45 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TREPR_0407 d73be5f02b17279bfab4bef6a99b3216 316 Pfam PF02779 Transketolase, pyrimidine binding domain 5 167 5.0E-31 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TREPR_0407 d73be5f02b17279bfab4bef6a99b3216 316 Pfam PF02780 Transketolase, C-terminal domain 180 301 5.4E-25 T 13-10-2018 IPR033248 Transketolase, C-terminal domain TREPR_0407 d73be5f02b17279bfab4bef6a99b3216 316 Gene3D G3DSA:3.40.50.920 180 314 1.8E-35 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_0407 d73be5f02b17279bfab4bef6a99b3216 316 SUPERFAMILY SSF52922 176 311 3.4E-31 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_0407 d73be5f02b17279bfab4bef6a99b3216 316 Gene3D G3DSA:3.40.50.970 1 177 1.5E-56 T 13-10-2018 TREPR_0407 d73be5f02b17279bfab4bef6a99b3216 316 SUPERFAMILY SSF52518 5 171 1.07E-49 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_2122 c5f893727116bc73916b44441215fd80 100 SUPERFAMILY SSF81301 16 98 9.12E-16 T 13-10-2018 TREPR_2122 c5f893727116bc73916b44441215fd80 100 Pfam PF01909 Nucleotidyltransferase domain 25 92 5.1E-10 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TREPR_2122 c5f893727116bc73916b44441215fd80 100 Gene3D G3DSA:3.30.460.10 1 100 2.3E-24 T 13-10-2018 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 Gene3D G3DSA:1.10.8.60 391 458 2.9E-26 T 13-10-2018 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 Pfam PF02954 Bacterial regulatory protein, Fis family 483 519 2.2E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 Gene3D G3DSA:3.30.450.40 15 191 2.6E-35 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 489 506 1.2E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 506 526 1.2E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 SMART SM00065 36 192 8.2E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 SUPERFAMILY SSF55781 16 155 4.66E-18 T 13-10-2018 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 306 321 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 Gene3D G3DSA:1.10.10.60 459 530 1.6E-12 T 13-10-2018 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 Gene3D G3DSA:3.40.50.300 206 390 3.5E-69 T 13-10-2018 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 Pfam PF01590 GAF domain 38 169 5.4E-8 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 SUPERFAMILY SSF52540 219 463 1.77E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 433 442 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 244 257 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 SMART SM00382 240 384 9.6E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 SUPERFAMILY SSF46689 433 525 2.2E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3511 f45dbe5c2ea22539e2b13888cb4dc51d 535 Pfam PF00158 Sigma-54 interaction domain 220 386 7.5E-73 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TREPR_3429 d55223b97d1dc98449e72247f6b8519b 177 Pfam PF03928 Haem-degrading 32 159 1.3E-19 T 13-10-2018 IPR005624 Haem-degrading TREPR_3429 d55223b97d1dc98449e72247f6b8519b 177 SUPERFAMILY SSF143744 23 162 2.35E-17 T 13-10-2018 IPR038084 GlcG-like domain superfamily TREPR_3429 d55223b97d1dc98449e72247f6b8519b 177 Gene3D G3DSA:3.30.450.150 4 168 2.7E-38 T 13-10-2018 IPR038084 GlcG-like domain superfamily TREPR_1266 21eba3c5a965b291256ec5285dcbbcdc 335 SUPERFAMILY SSF52467 209 329 6.04E-47 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TREPR_1266 21eba3c5a965b291256ec5285dcbbcdc 335 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 275 301 - T 13-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 TREPR_1266 21eba3c5a965b291256ec5285dcbbcdc 335 PIRSF PIRSF000089 3 335 7.8E-111 T 13-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 TREPR_1266 21eba3c5a965b291256ec5285dcbbcdc 335 Pfam PF01012 Electron transfer flavoprotein domain 7 194 3.9E-46 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TREPR_1266 21eba3c5a965b291256ec5285dcbbcdc 335 Gene3D G3DSA:3.40.50.620 2 208 3.3E-68 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1266 21eba3c5a965b291256ec5285dcbbcdc 335 Gene3D G3DSA:3.40.50.1220 209 335 4.0E-55 T 13-10-2018 TREPR_1266 21eba3c5a965b291256ec5285dcbbcdc 335 SUPERFAMILY SSF52402 6 205 3.91E-50 T 13-10-2018 TREPR_1266 21eba3c5a965b291256ec5285dcbbcdc 335 SMART SM00893 7 201 5.9E-38 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TREPR_1266 21eba3c5a965b291256ec5285dcbbcdc 335 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 211 294 1.2E-35 T 13-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 TREPR_1218 18f37269cb8d490cc86547520ca4ca9a 258 SMART SM00271 2 58 6.8E-17 T 13-10-2018 IPR001623 DnaJ domain TREPR_1218 18f37269cb8d490cc86547520ca4ca9a 258 Pfam PF00226 DnaJ domain 3 63 1.2E-16 T 13-10-2018 IPR001623 DnaJ domain TREPR_1218 18f37269cb8d490cc86547520ca4ca9a 258 PRINTS PR00625 DnaJ domain signature 5 23 1.4E-7 T 13-10-2018 IPR001623 DnaJ domain TREPR_1218 18f37269cb8d490cc86547520ca4ca9a 258 PRINTS PR00625 DnaJ domain signature 38 58 1.4E-7 T 13-10-2018 IPR001623 DnaJ domain TREPR_1218 18f37269cb8d490cc86547520ca4ca9a 258 SUPERFAMILY SSF46565 3 71 1.09E-20 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_1218 18f37269cb8d490cc86547520ca4ca9a 258 Gene3D G3DSA:1.10.287.110 1 68 1.1E-19 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 Gene3D G3DSA:3.40.1360.10 241 383 4.2E-36 T 13-10-2018 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 Pfam PF10410 DnaB-helicase binding domain of primase 387 441 1.7E-8 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 SMART SM00493 259 330 4.7E-17 T 13-10-2018 IPR006171 TOPRIM domain TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 Pfam PF01807 CHC2 zinc finger 5 99 1.7E-35 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 Gene3D G3DSA:3.90.580.10 2 100 1.0E-36 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 Pfam PF13662 Toprim domain 260 330 1.1E-18 T 13-10-2018 IPR006171 TOPRIM domain TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 PIRSF PIRSF002811 1 608 2.0E-151 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 SUPERFAMILY SSF56731 123 442 2.22E-85 T 13-10-2018 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 Hamap MF_00974 DNA primase [dnaG]. 3 606 25.946 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 SMART SM00400 35 89 2.6E-29 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 TIGRFAM TIGR01391 dnaG: DNA primase 4 436 2.9E-126 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 SUPERFAMILY SSF57783 1 96 1.28E-33 T 13-10-2018 TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 Gene3D G3DSA:3.90.980.10 111 240 2.4E-35 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily TREPR_2320 8f00d161c1a2c5d458e10d9e84707457 634 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 250 1.4E-33 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal TREPR_1509 d06fd34f96237e5d5bf08ad4acf803a8 351 Gene3D G3DSA:3.40.50.300 11 228 5.0E-67 T 13-10-2018 TREPR_1509 d06fd34f96237e5d5bf08ad4acf803a8 351 Gene3D G3DSA:2.40.50.140 284 337 2.1E-7 T 13-10-2018 TREPR_1509 d06fd34f96237e5d5bf08ad4acf803a8 351 SUPERFAMILY SSF52540 11 249 1.32E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1509 d06fd34f96237e5d5bf08ad4acf803a8 351 Pfam PF00005 ABC transporter 26 168 9.7E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1509 d06fd34f96237e5d5bf08ad4acf803a8 351 SUPERFAMILY SSF50331 244 339 1.11E-8 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_1509 d06fd34f96237e5d5bf08ad4acf803a8 351 SMART SM00382 35 218 4.6E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1509 d06fd34f96237e5d5bf08ad4acf803a8 351 Gene3D G3DSA:2.40.50.940 229 338 2.1E-7 T 13-10-2018 TREPR_1509 d06fd34f96237e5d5bf08ad4acf803a8 351 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1509 d06fd34f96237e5d5bf08ad4acf803a8 351 Pfam PF08402 TOBE domain 277 323 3.7E-7 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TREPR_1629 313d263f351dccf08ff8cff0b3fce229 444 Gene3D G3DSA:3.40.630.10 360 429 1.6E-5 T 13-10-2018 TREPR_1629 313d263f351dccf08ff8cff0b3fce229 444 SUPERFAMILY SSF53187 61 443 4.09E-15 T 13-10-2018 TREPR_1629 313d263f351dccf08ff8cff0b3fce229 444 Gene3D G3DSA:3.30.70.360 248 359 1.6E-5 T 13-10-2018 TREPR_1629 313d263f351dccf08ff8cff0b3fce229 444 Gene3D G3DSA:3.40.630.10 51 177 5.8E-14 T 13-10-2018 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 Pfam PF00515 Tetratricopeptide repeat 224 255 1.3E-6 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 Pfam PF13181 Tetratricopeptide repeat 49 81 3.9E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 Pfam PF13181 Tetratricopeptide repeat 263 288 0.032 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 Gene3D G3DSA:1.25.40.10 239 338 7.4E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 Gene3D G3DSA:1.25.40.10 22 128 2.7E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 SMART SM00028 291 324 36.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 SMART SM00028 83 116 1.1E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 SMART SM00028 117 150 7.4E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 SMART SM00028 49 82 6.7E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 SMART SM00028 222 255 6.9E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 SMART SM00028 151 184 0.002 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 SMART SM00028 256 290 14.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 Gene3D G3DSA:1.25.40.10 205 238 7.6E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 Gene3D G3DSA:1.25.40.10 129 200 1.4E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 Pfam PF13414 TPR repeat 90 131 2.8E-12 T 13-10-2018 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 Pfam PF13414 TPR repeat 135 159 9.8E-7 T 13-10-2018 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 SUPERFAMILY SSF48452 58 186 4.55E-37 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3859 b46d7957f7d81277697420e9f4408b84 363 SUPERFAMILY SSF48452 208 327 9.96E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0557 0451f651ab2a59aa3bad613266bbfc37 110 Pfam PF01381 Helix-turn-helix 12 60 6.9E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_0557 0451f651ab2a59aa3bad613266bbfc37 110 SUPERFAMILY SSF47413 4 70 2.65E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0557 0451f651ab2a59aa3bad613266bbfc37 110 Gene3D G3DSA:1.10.260.40 1 70 4.7E-14 T 13-10-2018 TREPR_0557 0451f651ab2a59aa3bad613266bbfc37 110 SMART SM00530 11 66 1.8E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 88 3.5E-8 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 SMART SM00836 479 609 5.3E-37 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 SMART SM01016 6 107 3.6E-11 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 168 1.7E-18 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 PRINTS PR01038 Arginyl-tRNA synthetase signature 176 189 1.7E-18 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 PRINTS PR01038 Arginyl-tRNA synthetase signature 137 152 1.7E-18 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 PRINTS PR01038 Arginyl-tRNA synthetase signature 324 345 1.7E-18 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 SUPERFAMILY SSF52374 134 473 1.21E-81 T 13-10-2018 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 Pfam PF00750 tRNA synthetases class I (R) 136 463 6.9E-52 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 11 609 1.7E-135 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 SUPERFAMILY SSF55190 12 118 4.58E-11 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 Gene3D G3DSA:1.10.730.10 478 609 1.6E-30 T 13-10-2018 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 Pfam PF05746 DALR anticodon binding domain 479 609 7.0E-29 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 145 156 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 Gene3D G3DSA:3.30.1360.70 6 130 1.1E-11 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 Hamap MF_00123 Arginine--tRNA ligase [argS]. 10 609 25.519 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TREPR_3443 a975122c83ca2d145ec61710069218b2 609 Gene3D G3DSA:3.40.50.620 134 477 5.2E-111 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_3443 a975122c83ca2d145ec61710069218b2 609 SUPERFAMILY SSF47323 473 609 1.7E-28 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_2083 4bec87940f14cf7fdfaedef90464f566 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2083 4bec87940f14cf7fdfaedef90464f566 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2083 4bec87940f14cf7fdfaedef90464f566 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2083 4bec87940f14cf7fdfaedef90464f566 233 SUPERFAMILY SSF46894 141 210 5.78E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_2083 4bec87940f14cf7fdfaedef90464f566 233 Gene3D G3DSA:3.40.50.12740 5 209 3.9E-22 T 13-10-2018 TREPR_2083 4bec87940f14cf7fdfaedef90464f566 233 SMART SM00421 146 203 2.5E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2083 4bec87940f14cf7fdfaedef90464f566 233 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 200 8.6E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 SUPERFAMILY SSF82693 134 332 5.49E-18 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 SUPERFAMILY SSF82693 574 670 2.09E-7 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 Gene3D G3DSA:1.20.1640.10 522 1033 0.0 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 Gene3D G3DSA:3.30.70.1440 676 876 0.0 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 Gene3D G3DSA:1.20.1640.10 10 521 0.0 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 SUPERFAMILY SSF82866 298 499 1.7E-42 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 SUPERFAMILY SSF82714 182 274 6.54E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 SUPERFAMILY SSF82866 813 1038 1.57E-47 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.1E-45 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-45 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 1.1E-45 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 1.1E-45 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 PRINTS PR00702 Acriflavin resistance protein family signature 474 497 1.1E-45 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-45 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.1E-45 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.1E-45 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 SUPERFAMILY SSF82693 40 133 3.14E-24 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 Gene3D G3DSA:3.30.2090.10 728 817 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 Gene3D G3DSA:3.30.2090.10 177 277 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 Pfam PF00873 AcrB/AcrD/AcrF family 3 1036 1.5E-238 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 Gene3D G3DSA:3.30.70.1430 576 675 0.0 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 Gene3D G3DSA:3.30.70.1320 132 334 0.0 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 Gene3D G3DSA:3.30.70.1430 40 825 0.0 T 13-10-2018 TREPR_1384 2fc985ed1e7b94369ba098f7b5950340 1092 SUPERFAMILY SSF82714 729 816 4.97E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TREPR_3809 5727034cf09986c1bfa914d515f75c9c 294 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 288 3.0E-55 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TREPR_3809 5727034cf09986c1bfa914d515f75c9c 294 Gene3D G3DSA:3.40.50.150 1 292 3.6E-89 T 13-10-2018 TREPR_3809 5727034cf09986c1bfa914d515f75c9c 294 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 278 36.362 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TREPR_3809 5727034cf09986c1bfa914d515f75c9c 294 SUPERFAMILY SSF53335 9 285 4.43E-69 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0830 8e1023cd4ef1e78c9135f34aef943762 534 SUPERFAMILY SSF53850 28 525 4.34E-117 T 13-10-2018 TREPR_0830 8e1023cd4ef1e78c9135f34aef943762 534 Gene3D G3DSA:3.40.190.10 190 514 5.5E-116 T 13-10-2018 TREPR_0830 8e1023cd4ef1e78c9135f34aef943762 534 Gene3D G3DSA:3.10.105.10 268 505 5.5E-116 T 13-10-2018 TREPR_0830 8e1023cd4ef1e78c9135f34aef943762 534 PIRSF PIRSF002741 6 522 1.4E-93 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_0830 8e1023cd4ef1e78c9135f34aef943762 534 Gene3D G3DSA:3.90.76.10 39 189 5.5E-116 T 13-10-2018 TREPR_0830 8e1023cd4ef1e78c9135f34aef943762 534 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 448 6.0E-79 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 SUPERFAMILY SSF53784 7 358 6.67E-111 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 10 366 40.766 T 13-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 Pfam PF00365 Phosphofructokinase 13 317 1.4E-97 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 Gene3D G3DSA:3.40.50.460 159 297 9.2E-111 T 13-10-2018 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 Gene3D G3DSA:3.40.50.450 12 339 9.2E-111 T 13-10-2018 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 231 243 6.2E-68 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 281 303 6.2E-68 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 14 33 6.2E-68 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 156 6.2E-68 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 112 128 6.2E-68 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 157 175 6.2E-68 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 40 53 6.2E-68 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 193 6.2E-68 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 195 212 6.2E-68 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_3551 fdc1394625e2a2bece05c78141e47714 367 PIRSF PIRSF000532 8 367 6.2E-114 T 13-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 SUPERFAMILY SSF54814 181 304 7.52E-30 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 SMART SM00382 4 145 6.5E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 139 3.9E-21 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 SUPERFAMILY SSF52540 8 211 5.67E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 TIGRFAM TIGR00436 era: GTP-binding protein Era 7 289 3.8E-66 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 Hamap MF_00367 GTPase Era [era]. 3 306 29.621 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 Gene3D G3DSA:3.30.300.20 186 307 1.6E-33 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 Pfam PF07650 KH domain 208 294 2.8E-15 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 Pfam PF01926 50S ribosome-binding GTPase 8 104 3.4E-19 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3043 f9ce034783c94ca09e92b5023a8d04cf 308 Gene3D G3DSA:3.40.50.300 1 185 6.3E-38 T 13-10-2018 TREPR_2359 b42b324fe4905edd243ab22d4db0db15 161 SUPERFAMILY SSF54292 2 78 7.21E-22 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TREPR_2359 b42b324fe4905edd243ab22d4db0db15 161 Gene3D G3DSA:1.10.150.120 75 159 3.8E-14 T 13-10-2018 TREPR_2359 b42b324fe4905edd243ab22d4db0db15 161 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TREPR_2359 b42b324fe4905edd243ab22d4db0db15 161 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 58 2.9E-5 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TREPR_2359 b42b324fe4905edd243ab22d4db0db15 161 SUPERFAMILY SSF47741 84 153 4.71E-17 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily TREPR_2359 b42b324fe4905edd243ab22d4db0db15 161 Gene3D G3DSA:3.10.20.30 1 74 1.9E-24 T 13-10-2018 IPR012675 Beta-grasp domain superfamily TREPR_2359 b42b324fe4905edd243ab22d4db0db15 161 Pfam PF01799 [2Fe-2S] binding domain 73 139 5.2E-15 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TREPR_3746 3ec628d1923d425f7494b3b7d6c6da18 464 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 10 456 6.4E-34 T 13-10-2018 IPR029468 O-antigen polysaccharide polymerase Wzy TREPR_3746 3ec628d1923d425f7494b3b7d6c6da18 464 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 99 447 8.1E-15 T 13-10-2018 TREPR_0696 568773524418bec8dc9319c4eacda08c 387 Pfam PF10442 FIST C domain 253 365 1.0E-12 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 TREPR_0696 568773524418bec8dc9319c4eacda08c 387 SMART SM01204 227 366 4.0E-7 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 TREPR_0696 568773524418bec8dc9319c4eacda08c 387 Pfam PF08495 FIST N domain 49 227 3.1E-7 T 13-10-2018 IPR013702 FIST domain, N-terminal TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 21 79 1.8E-17 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 SUPERFAMILY SSF54862 145 228 3.21E-15 T 13-10-2018 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 Gene3D G3DSA:3.30.70.20 161 226 2.6E-12 T 13-10-2018 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 Pfam PF14697 4Fe-4S dicluster domain 167 216 1.7E-9 T 13-10-2018 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 SUPERFAMILY SSF55124 19 80 9.6E-18 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 143 159 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 SUPERFAMILY SSF56014 100 309 1.87E-34 T 13-10-2018 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 PRINTS PR00397 Sirohaem Fe-binding site signature 143 161 2.1E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 PRINTS PR00397 Sirohaem Fe-binding site signature 102 120 2.1E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 99 297 3.5E-26 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 Gene3D G3DSA:3.90.480.20 5 101 9.8E-11 T 13-10-2018 TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 204 215 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1703 4ed63d5983a6ca86b1c6fef1fb56e9a2 320 TIGRFAM TIGR02912 sulfite_red_C: sulfite reductase, subunit C 2 315 5.0E-162 T 13-10-2018 IPR014261 Sulphite reductase, subunit C TREPR_2028 47679498e82848de05f329f266ae7e18 405 SUPERFAMILY SSF56672 7 238 5.23E-41 T 13-10-2018 TREPR_2028 47679498e82848de05f329f266ae7e18 405 Gene3D G3DSA:3.30.70.270 9 168 1.1E-24 T 13-10-2018 TREPR_2028 47679498e82848de05f329f266ae7e18 405 Gene3D G3DSA:2.30.40.20 25 77 1.1E-24 T 13-10-2018 TREPR_2028 47679498e82848de05f329f266ae7e18 405 Gene3D G3DSA:1.10.150.20 183 233 9.1E-7 T 13-10-2018 TREPR_2028 47679498e82848de05f329f266ae7e18 405 Pfam PF00817 impB/mucB/samB family 16 157 4.5E-20 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Gene3D G3DSA:1.20.1440.230 465 566 2.1E-31 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Gene3D G3DSA:3.10.20.600 370 463 4.3E-35 T 13-10-2018 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 187 357 4.7E-47 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Pfam PF10531 SLBB domain 381 430 3.6E-9 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Gene3D G3DSA:3.40.30.10 26 122 2.5E-22 T 13-10-2018 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 SUPERFAMILY SSF142019 138 378 6.02E-91 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 SUPERFAMILY SSF52833 26 120 4.81E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 SUPERFAMILY SSF142984 379 462 3.27E-26 T 13-10-2018 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Pfam PF00037 4Fe-4S binding domain 570 592 6.0E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Pfam PF00037 4Fe-4S binding domain 599 621 4.2E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Gene3D G3DSA:3.40.50.11540 191 369 8.8E-79 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 SUPERFAMILY SSF54862 569 622 5.14E-13 T 13-10-2018 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 SUPERFAMILY SSF140490 463 565 6.15E-35 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 576 587 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 468 552 4.8E-31 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 SMART SM00928 467 512 2.4E-24 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 480 491 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 20 102 4.7E-7 T 13-10-2018 TREPR_3595 2d75d81c0797f79fdffc05af77c33eb5 624 Gene3D G3DSA:3.30.70.20 570 624 3.3E-12 T 13-10-2018 TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 11 708 7.4E-234 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 SUPERFAMILY SSF51011 607 714 1.73E-15 T 13-10-2018 TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 Gene3D G3DSA:2.60.40.10 5 134 6.4E-37 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 Gene3D G3DSA:3.20.20.80 150 599 4.3E-186 T 13-10-2018 TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 SMART SM00642 173 585 3.2E-10 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 SUPERFAMILY SSF51445 148 591 3.09E-128 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 Pfam PF00128 Alpha amylase, catalytic domain 191 298 1.9E-11 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 Gene3D G3DSA:2.60.40.1180 604 715 5.9E-20 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 SUPERFAMILY SSF81296 11 161 1.18E-36 T 13-10-2018 IPR014756 Immunoglobulin E-set TREPR_0838 82dc22b57f2e8d9aca396c86f8b74805 717 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 15 107 6.6E-14 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TREPR_2736 1ea9023f37c421e7f621621441232bcf 405 Gene3D G3DSA:3.90.220.20 3 403 1.9E-75 T 13-10-2018 TREPR_2736 1ea9023f37c421e7f621621441232bcf 405 Gene3D G3DSA:3.90.220.20 210 357 1.9E-75 T 13-10-2018 TREPR_2736 1ea9023f37c421e7f621621441232bcf 405 Pfam PF01420 Type I restriction modification DNA specificity domain 1 172 4.1E-32 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TREPR_2736 1ea9023f37c421e7f621621441232bcf 405 Pfam PF01420 Type I restriction modification DNA specificity domain 206 385 5.1E-15 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TREPR_2736 1ea9023f37c421e7f621621441232bcf 405 SUPERFAMILY SSF116734 3 191 1.49E-46 T 13-10-2018 TREPR_2736 1ea9023f37c421e7f621621441232bcf 405 Gene3D G3DSA:1.10.287.1120 146 400 1.9E-75 T 13-10-2018 TREPR_2736 1ea9023f37c421e7f621621441232bcf 405 SUPERFAMILY SSF116734 204 404 5.72E-30 T 13-10-2018 TREPR_3339 b54a9576d201555a9a872a25bff6d05b 269 Gene3D G3DSA:3.40.190.10 106 227 1.2E-44 T 13-10-2018 TREPR_3339 b54a9576d201555a9a872a25bff6d05b 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 259 2.3E-32 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_3339 b54a9576d201555a9a872a25bff6d05b 269 SUPERFAMILY SSF53850 34 259 1.32E-37 T 13-10-2018 TREPR_3339 b54a9576d201555a9a872a25bff6d05b 269 Gene3D G3DSA:3.40.190.10 40 258 1.2E-44 T 13-10-2018 TREPR_3339 b54a9576d201555a9a872a25bff6d05b 269 SMART SM00062 37 263 9.1E-24 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_3674 73465e16380e2bdb8b963ad4ec91db5f 409 Pfam PF01926 50S ribosome-binding GTPase 14 128 2.6E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3674 73465e16380e2bdb8b963ad4ec91db5f 409 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 162 2.5E-22 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_3674 73465e16380e2bdb8b963ad4ec91db5f 409 TIGRFAM TIGR03918 GTP_HydF: [FeFe] hydrogenase H-cluster maturation GTPase HydF 6 395 1.2E-171 T 13-10-2018 IPR023873 [FeFe]-hydrogenase H-cluster maturation GTPase HydF TREPR_3674 73465e16380e2bdb8b963ad4ec91db5f 409 Gene3D G3DSA:3.40.50.11420 181 289 5.0E-45 T 13-10-2018 TREPR_3674 73465e16380e2bdb8b963ad4ec91db5f 409 Gene3D G3DSA:3.40.50.300 4 177 5.2E-39 T 13-10-2018 TREPR_3674 73465e16380e2bdb8b963ad4ec91db5f 409 SUPERFAMILY SSF52540 12 174 4.69E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3674 73465e16380e2bdb8b963ad4ec91db5f 409 Gene3D G3DSA:3.40.50.11410 290 398 7.8E-40 T 13-10-2018 TREPR_2441 d130609042209a95f0fa86e9e3e0e9f5 259 Gene3D G3DSA:2.20.25.110 162 217 1.9E-40 T 13-10-2018 TREPR_2441 d130609042209a95f0fa86e9e3e0e9f5 259 SUPERFAMILY SSF53335 50 259 7.19E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2441 d130609042209a95f0fa86e9e3e0e9f5 259 Pfam PF13649 Methyltransferase domain 59 154 6.8E-18 T 13-10-2018 TREPR_2441 d130609042209a95f0fa86e9e3e0e9f5 259 Gene3D G3DSA:3.40.50.150 53 241 1.9E-40 T 13-10-2018 TREPR_2935 31915a268654f2542abc5d02cc24f38f 369 Gene3D G3DSA:3.40.640.10 1 252 5.1E-28 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_2935 31915a268654f2542abc5d02cc24f38f 369 SUPERFAMILY SSF53383 3 365 2.41E-30 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_2935 31915a268654f2542abc5d02cc24f38f 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 164 1.2E-13 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TREPR_2935 31915a268654f2542abc5d02cc24f38f 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 237 363 6.1E-6 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TREPR_2935 31915a268654f2542abc5d02cc24f38f 369 Gene3D G3DSA:3.90.1150.10 256 368 4.4E-7 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_2663 82e75f5d6be25963e96735e10bcdb08f 454 Gene3D G3DSA:2.60.40.3630 114 193 2.2E-16 T 13-10-2018 TREPR_2663 82e75f5d6be25963e96735e10bcdb08f 454 Gene3D G3DSA:2.60.40.3630 196 275 8.8E-18 T 13-10-2018 TREPR_2663 82e75f5d6be25963e96735e10bcdb08f 454 Gene3D G3DSA:2.60.40.3630 36 112 5.6E-20 T 13-10-2018 TREPR_2663 82e75f5d6be25963e96735e10bcdb08f 454 Gene3D G3DSA:2.60.40.3630 279 357 1.5E-14 T 13-10-2018 TREPR_2663 82e75f5d6be25963e96735e10bcdb08f 454 Pfam PF07523 Bacterial Ig-like domain (group 3) 206 275 3.2E-5 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2663 82e75f5d6be25963e96735e10bcdb08f 454 Pfam PF07523 Bacterial Ig-like domain (group 3) 287 356 1.5E-7 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2663 82e75f5d6be25963e96735e10bcdb08f 454 Pfam PF07523 Bacterial Ig-like domain (group 3) 46 112 5.6E-11 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 2 880 1.9E-244 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 SMART SM00533 265 581 2.7E-82 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Pfam PF05188 MutS domain II 99 233 3.0E-22 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Gene3D G3DSA:3.30.420.110 98 242 2.8E-31 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 SUPERFAMILY SSF53150 85 246 4.84E-34 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 PIRSF PIRSF037677 1 818 4.9E-146 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Gene3D G3DSA:3.40.1170.10 1 92 2.8E-32 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 SUPERFAMILY SSF55271 1 86 7.06E-29 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 SMART SM00534 599 784 8.7E-114 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Gene3D G3DSA:1.10.1420.10 247 549 4.2E-86 T 13-10-2018 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 SUPERFAMILY SSF48334 248 554 1.57E-73 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Gene3D G3DSA:1.10.1420.10 390 525 4.2E-86 T 13-10-2018 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Gene3D G3DSA:3.40.50.300 558 817 6.2E-98 T 13-10-2018 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Pfam PF00488 MutS domain V 603 787 2.9E-79 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 SUPERFAMILY SSF52540 557 787 1.98E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 680 696 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Pfam PF05192 MutS domain III 250 549 5.9E-37 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 875 22.277 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Pfam PF05190 MutS family domain IV 418 508 4.9E-23 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 TREPR_2630 4098893fe34b84f481e8ec36482292c1 906 Pfam PF01624 MutS domain I 1 90 4.4E-29 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TREPR_1469 cdb49b8986856d42443a5fe755cd5896 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 57 2.9E-10 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TREPR_1469 cdb49b8986856d42443a5fe755cd5896 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 52 1.1E-7 T 13-10-2018 TREPR_1469 cdb49b8986856d42443a5fe755cd5896 84 SUPERFAMILY SSF143120 3 53 9.02E-12 T 13-10-2018 IPR036165 YefM-like superfamily TREPR_2604 188a9c1070184cc73793be05f93f3915 290 Pfam PF03167 Uracil DNA glycosylase superfamily 116 268 1.3E-42 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TREPR_2604 188a9c1070184cc73793be05f93f3915 290 SMART SM00986 116 268 2.6E-37 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TREPR_2604 188a9c1070184cc73793be05f93f3915 290 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 102 273 1.7E-61 T 13-10-2018 IPR005273 Uracil-DNA glycosylase family 4 TREPR_2604 188a9c1070184cc73793be05f93f3915 290 Gene3D G3DSA:3.40.470.10 90 286 2.6E-66 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TREPR_2604 188a9c1070184cc73793be05f93f3915 290 SUPERFAMILY SSF52141 89 274 7.85E-57 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TREPR_2604 188a9c1070184cc73793be05f93f3915 290 SMART SM00987 116 268 2.6E-37 T 13-10-2018 TREPR_0419 bd1aead9fe7e575e484329cd30dfaad0 263 SUPERFAMILY SSF48317 82 239 1.7E-27 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TREPR_0419 bd1aead9fe7e575e484329cd30dfaad0 263 Gene3D G3DSA:1.20.144.10 149 249 8.9E-19 T 13-10-2018 TREPR_0419 bd1aead9fe7e575e484329cd30dfaad0 263 SMART SM00014 114 234 5.1E-9 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TREPR_0419 bd1aead9fe7e575e484329cd30dfaad0 263 Pfam PF01569 PAP2 superfamily 119 240 2.2E-22 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 Hamap MF_00082 Acetylglutamate kinase [argB]. 26 285 48.739 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 Pfam PF00696 Amino acid kinase family 27 269 3.2E-43 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 SUPERFAMILY SSF53633 8 292 2.23E-85 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 Gene3D G3DSA:3.40.1160.10 3 296 1.8E-97 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 PRINTS PR00474 Glutamate 5-kinase family signature 154 175 6.4E-10 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 PRINTS PR00474 Glutamate 5-kinase family signature 242 262 6.4E-10 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 PRINTS PR00474 Glutamate 5-kinase family signature 58 72 6.4E-10 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 PRINTS PR00474 Glutamate 5-kinase family signature 189 216 6.4E-10 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 PIRSF PIRSF000728 7 292 3.1E-107 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TREPR_3333 3e7447a30852c6f69aad0eccbebcb86b 296 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 267 7.4E-77 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TREPR_2461 6c61c7e3d8871169ea18affba22208f7 545 SUPERFAMILY SSF56059 120 324 3.54E-33 T 13-10-2018 TREPR_2461 6c61c7e3d8871169ea18affba22208f7 545 Pfam PF13535 ATP-grasp domain 156 295 2.3E-10 T 13-10-2018 TREPR_2461 6c61c7e3d8871169ea18affba22208f7 545 Gene3D G3DSA:3.40.50.20 11 134 1.2E-28 T 13-10-2018 TREPR_2461 6c61c7e3d8871169ea18affba22208f7 545 Gene3D G3DSA:3.30.1490.20 152 202 4.6E-9 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TREPR_2461 6c61c7e3d8871169ea18affba22208f7 545 SUPERFAMILY SSF52440 17 74 1.5E-6 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TREPR_2461 6c61c7e3d8871169ea18affba22208f7 545 Gene3D G3DSA:3.30.470.20 203 412 1.2E-27 T 13-10-2018 TREPR_0531 780db1d9dfe86d73c8cc5dfaefe0ad74 212 Pfam PF02570 Precorrin-8X methylmutase 10 207 9.0E-72 T 13-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 TREPR_0531 780db1d9dfe86d73c8cc5dfaefe0ad74 212 Gene3D G3DSA:3.40.50.10230 5 212 9.4E-75 T 13-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TREPR_0531 780db1d9dfe86d73c8cc5dfaefe0ad74 212 SUPERFAMILY SSF63965 10 209 3.14E-65 T 13-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TREPR_2968 25a583c3c3b2bd681b9f20261d6e34d2 473 Gene3D G3DSA:3.40.50.2300 376 473 1.1E-32 T 13-10-2018 TREPR_2968 25a583c3c3b2bd681b9f20261d6e34d2 473 Pfam PF02378 Phosphotransferase system, EIIC 18 277 1.0E-12 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 TREPR_2968 25a583c3c3b2bd681b9f20261d6e34d2 473 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 385 469 1.9E-12 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 TREPR_2968 25a583c3c3b2bd681b9f20261d6e34d2 473 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 2.7E-153 T 13-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 TREPR_2968 25a583c3c3b2bd681b9f20261d6e34d2 473 SUPERFAMILY SSF52794 382 472 2.62E-22 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 TREPR_3336 02187638d50e453f3a6aeac7d2c5d950 463 PRINTS PR01950 LanC-like protein superfamily signature 419 436 1.9E-5 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3336 02187638d50e453f3a6aeac7d2c5d950 463 PRINTS PR01950 LanC-like protein superfamily signature 237 253 1.9E-5 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3336 02187638d50e453f3a6aeac7d2c5d950 463 PRINTS PR01950 LanC-like protein superfamily signature 52 70 1.9E-5 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3336 02187638d50e453f3a6aeac7d2c5d950 463 SMART SM01260 49 449 4.5E-27 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3336 02187638d50e453f3a6aeac7d2c5d950 463 Gene3D G3DSA:1.50.10.20 5 201 1.9E-6 T 13-10-2018 TREPR_3336 02187638d50e453f3a6aeac7d2c5d950 463 SUPERFAMILY SSF158745 52 441 1.11E-37 T 13-10-2018 TREPR_3336 02187638d50e453f3a6aeac7d2c5d950 463 Pfam PF05147 Lanthionine synthetase C-like protein 53 440 2.0E-21 T 13-10-2018 IPR007822 Lanthionine synthetase C-like TREPR_3336 02187638d50e453f3a6aeac7d2c5d950 463 Gene3D G3DSA:1.50.10.10 220 449 4.9E-10 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TREPR_3358 5cab0bc4111f8d2e80657329c79d5469 263 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.4E-122 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TREPR_3358 5cab0bc4111f8d2e80657329c79d5469 263 Gene3D G3DSA:3.40.50.1360 1 263 1.9E-114 T 13-10-2018 TREPR_3358 5cab0bc4111f8d2e80657329c79d5469 263 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 221 2.9E-21 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 TREPR_3358 5cab0bc4111f8d2e80657329c79d5469 263 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 13-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TREPR_3358 5cab0bc4111f8d2e80657329c79d5469 263 SUPERFAMILY SSF100950 1 261 2.41E-102 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_3358 5cab0bc4111f8d2e80657329c79d5469 263 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.832 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TREPR_1950 e6f9d6cfa6b176e387d8f61c05a58e1f 176 SUPERFAMILY SSF142433 19 172 8.37E-50 T 13-10-2018 IPR036653 CinA-like, C-terminal TREPR_1950 e6f9d6cfa6b176e387d8f61c05a58e1f 176 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 25 172 2.1E-40 T 13-10-2018 IPR008136 CinA, C-terminal TREPR_1950 e6f9d6cfa6b176e387d8f61c05a58e1f 176 Pfam PF02464 Competence-damaged protein 21 171 2.5E-50 T 13-10-2018 IPR008136 CinA, C-terminal TREPR_1950 e6f9d6cfa6b176e387d8f61c05a58e1f 176 Gene3D G3DSA:3.90.950.20 13 173 2.3E-55 T 13-10-2018 IPR036653 CinA-like, C-terminal TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 SMART SM01061 1 58 1.7E-20 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 Gene3D G3DSA:2.30.24.10 1 54 4.2E-18 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 SUPERFAMILY SSF63520 57 164 2.22E-15 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 Pfam PF00874 PRD domain 181 273 1.4E-7 T 13-10-2018 IPR011608 PRD domain GO:0006355 TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 Pfam PF00874 PRD domain 79 162 4.4E-9 T 13-10-2018 IPR011608 PRD domain GO:0006355 TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 Gene3D G3DSA:1.10.1790.10 63 165 9.9E-19 T 13-10-2018 TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 SUPERFAMILY SSF50151 1 51 4.58E-14 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 Gene3D G3DSA:1.10.1790.10 168 276 6.6E-23 T 13-10-2018 TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 SUPERFAMILY SSF63520 171 273 4.97E-15 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 TREPR_2957 1497687b9b7f7efd1d1495a6a0f3c9c9 280 Pfam PF03123 CAT RNA binding domain 1 52 8.5E-17 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 TREPR_1129 03f392701db4ca305b240b8ee5ba8dee 344 Gene3D G3DSA:1.10.3470.10 18 342 1.4E-100 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_1129 03f392701db4ca305b240b8ee5ba8dee 344 SUPERFAMILY SSF81345 18 339 9.81E-77 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_1129 03f392701db4ca305b240b8ee5ba8dee 344 Pfam PF01032 FecCD transport family 29 339 2.3E-87 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TREPR_0999 6ef298fb2dfd49424f387b46e980df79 388 Gene3D G3DSA:2.70.70.10 216 370 8.1E-38 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_0999 6ef298fb2dfd49424f387b46e980df79 388 Pfam PF01551 Peptidase family M23 270 364 5.7E-27 T 13-10-2018 IPR016047 Peptidase M23 TREPR_0999 6ef298fb2dfd49424f387b46e980df79 388 SUPERFAMILY SSF51261 222 364 5.23E-42 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_0812 a194a63569cf2f38fa75feb5d1360cec 434 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 375 408 2.4E-7 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain TREPR_0812 a194a63569cf2f38fa75feb5d1360cec 434 SUPERFAMILY SSF56281 1 411 1.22E-43 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_0812 a194a63569cf2f38fa75feb5d1360cec 434 Gene3D G3DSA:3.40.50.10710 205 384 3.8E-61 T 13-10-2018 TREPR_0812 a194a63569cf2f38fa75feb5d1360cec 434 Gene3D G3DSA:3.60.15.10 2 411 3.8E-61 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_0812 a194a63569cf2f38fa75feb5d1360cec 434 SMART SM00849 13 235 2.4E-5 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_0812 a194a63569cf2f38fa75feb5d1360cec 434 Pfam PF12706 Beta-lactamase superfamily domain 72 202 7.4E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2812 741ab3c8086fb481a5c6404aa8e96930 103 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 98 24.45 T 13-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS TREPR_2812 741ab3c8086fb481a5c6404aa8e96930 103 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 21 98 5.1E-31 T 13-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 TREPR_2812 741ab3c8086fb481a5c6404aa8e96930 103 SUPERFAMILY SSF54736 18 102 4.97E-28 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TREPR_2812 741ab3c8086fb481a5c6404aa8e96930 103 Gene3D G3DSA:3.30.1390.10 3 103 2.8E-38 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TREPR_0938 9e2ceb17bdab1eb464c6ec3dc693b518 273 Gene3D G3DSA:3.40.50.720 4 263 2.0E-58 T 13-10-2018 TREPR_0938 9e2ceb17bdab1eb464c6ec3dc693b518 273 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 124 7.4E-16 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 TREPR_0938 9e2ceb17bdab1eb464c6ec3dc693b518 273 SUPERFAMILY SSF51735 1 155 2.6E-19 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0938 9e2ceb17bdab1eb464c6ec3dc693b518 273 Pfam PF01958 Domain of unknown function DUF108 172 257 7.7E-25 T 13-10-2018 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 TREPR_0938 9e2ceb17bdab1eb464c6ec3dc693b518 273 PIRSF PIRSF005227 1 273 1.3E-63 T 13-10-2018 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 TREPR_0938 9e2ceb17bdab1eb464c6ec3dc693b518 273 SUPERFAMILY SSF55347 127 239 1.5E-20 T 13-10-2018 TREPR_0938 9e2ceb17bdab1eb464c6ec3dc693b518 273 Gene3D G3DSA:3.30.360.10 127 246 2.0E-58 T 13-10-2018 TREPR_2542 10d6ef5e0d72c96f311b0efc5714fa8a 680 Pfam PF08218 Citrate lyase ligase C-terminal domain 494 674 2.6E-56 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_2542 10d6ef5e0d72c96f311b0efc5714fa8a 680 SUPERFAMILY SSF52266 296 420 1.1E-5 T 13-10-2018 TREPR_2542 10d6ef5e0d72c96f311b0efc5714fa8a 680 SMART SM00764 493 674 2.3E-66 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_2542 10d6ef5e0d72c96f311b0efc5714fa8a 680 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 469 675 2.0E-40 T 13-10-2018 TREPR_2542 10d6ef5e0d72c96f311b0efc5714fa8a 680 SUPERFAMILY SSF52374 498 676 2.42E-20 T 13-10-2018 TREPR_2542 10d6ef5e0d72c96f311b0efc5714fa8a 680 Gene3D G3DSA:3.40.50.620 494 679 1.7E-18 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_0335 0586f1dee83734c1507ed17ef3fe1e05 313 Pfam PF02780 Transketolase, C-terminal domain 174 296 5.8E-27 T 13-10-2018 IPR033248 Transketolase, C-terminal domain TREPR_0335 0586f1dee83734c1507ed17ef3fe1e05 313 SUPERFAMILY SSF52518 1 158 3.53E-38 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0335 0586f1dee83734c1507ed17ef3fe1e05 313 Gene3D G3DSA:3.40.50.920 174 312 5.8E-33 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_0335 0586f1dee83734c1507ed17ef3fe1e05 313 SMART SM00861 1 163 2.4E-27 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TREPR_0335 0586f1dee83734c1507ed17ef3fe1e05 313 Pfam PF02779 Transketolase, pyrimidine binding domain 1 158 3.1E-24 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TREPR_0335 0586f1dee83734c1507ed17ef3fe1e05 313 SUPERFAMILY SSF52922 170 301 2.36E-30 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_0335 0586f1dee83734c1507ed17ef3fe1e05 313 Gene3D G3DSA:3.40.50.970 1 169 2.7E-44 T 13-10-2018 TREPR_0516 dd61eb0079fcd5b084be2d8a4d888573 302 SUPERFAMILY SSF53800 43 299 2.88E-78 T 13-10-2018 TREPR_0516 dd61eb0079fcd5b084be2d8a4d888573 302 Pfam PF06180 Cobalt chelatase (CbiK) 46 299 4.3E-89 T 13-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 TREPR_0516 dd61eb0079fcd5b084be2d8a4d888573 302 Gene3D G3DSA:3.40.50.1400 46 298 1.0E-99 T 13-10-2018 TREPR_0516 dd61eb0079fcd5b084be2d8a4d888573 302 Gene3D G3DSA:3.40.50.1400 155 279 1.0E-99 T 13-10-2018 TREPR_0516 dd61eb0079fcd5b084be2d8a4d888573 302 PIRSF PIRSF033579 41 302 1.1E-92 T 13-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 TREPR_0670 0df0cb4e4b52d8787e1f52529a8da332 453 SUPERFAMILY SSF53335 86 447 2.71E-64 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0670 0df0cb4e4b52d8787e1f52529a8da332 453 Gene3D G3DSA:2.30.130.10 1 77 4.8E-19 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 TREPR_0670 0df0cb4e4b52d8787e1f52529a8da332 453 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 221 406 1.2E-19 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 TREPR_0670 0df0cb4e4b52d8787e1f52529a8da332 453 SUPERFAMILY SSF88697 1 76 9.69E-10 T 13-10-2018 IPR015947 PUA-like superfamily TREPR_0670 0df0cb4e4b52d8787e1f52529a8da332 453 Gene3D G3DSA:3.40.50.150 230 453 8.6E-72 T 13-10-2018 TREPR_0670 0df0cb4e4b52d8787e1f52529a8da332 453 Gene3D G3DSA:3.30.750.80 79 228 6.8E-22 T 13-10-2018 TREPR_0394 741cb2b1e3b5cccc6aab9899084e659f 342 SUPERFAMILY SSF55347 142 300 6.2E-30 T 13-10-2018 TREPR_0394 741cb2b1e3b5cccc6aab9899084e659f 342 Hamap MF_00559 Glyceraldehyde-3-phosphate dehydrogenase [gap]. 1 342 113.349 T 13-10-2018 IPR006436 Glyceraldehyde-3-phosphate dehydrogenase, type II GO:0005737|GO:0006096|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.59|KEGG: 00710+1.2.1.59 TREPR_0394 741cb2b1e3b5cccc6aab9899084e659f 342 SMART SM00846 2 142 0.003 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0394 741cb2b1e3b5cccc6aab9899084e659f 342 Gene3D G3DSA:3.40.50.720 4 330 4.3E-109 T 13-10-2018 TREPR_0394 741cb2b1e3b5cccc6aab9899084e659f 342 TIGRFAM TIGR01546 GAPDH-II_archae: glyceraldehyde-3-phosphate dehydrogenase, type II 4 337 4.8E-88 T 13-10-2018 IPR006436 Glyceraldehyde-3-phosphate dehydrogenase, type II GO:0005737|GO:0006096|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.59|KEGG: 00710+1.2.1.59 TREPR_0394 741cb2b1e3b5cccc6aab9899084e659f 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 147 295 5.1E-11 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0394 741cb2b1e3b5cccc6aab9899084e659f 342 SUPERFAMILY SSF51735 2 160 1.15E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0394 741cb2b1e3b5cccc6aab9899084e659f 342 Gene3D G3DSA:3.30.360.10 140 336 4.3E-109 T 13-10-2018 TREPR_0394 741cb2b1e3b5cccc6aab9899084e659f 342 PIRSF PIRSF000149 1 321 1.2E-42 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0551 421c9b08e473eda5bb1a6fb0a14366c3 376 Pfam PF12838 4Fe-4S dicluster domain 197 241 3.3E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_0551 421c9b08e473eda5bb1a6fb0a14366c3 376 Gene3D G3DSA:3.30.70.20 166 216 6.1E-6 T 13-10-2018 TREPR_0551 421c9b08e473eda5bb1a6fb0a14366c3 376 Gene3D G3DSA:3.30.70.20 217 263 2.5E-7 T 13-10-2018 TREPR_0551 421c9b08e473eda5bb1a6fb0a14366c3 376 Pfam PF04015 Domain of unknown function (DUF362) 42 314 2.3E-46 T 13-10-2018 IPR007160 Domain of unknown function DUF362 TREPR_0551 421c9b08e473eda5bb1a6fb0a14366c3 376 SUPERFAMILY SSF54862 179 245 4.45E-19 T 13-10-2018 TREPR_2198 a1f5b2be878c1047dea62e3de097524e 464 Pfam PF03288 Poxvirus D5 protein-like 388 441 3.7E-6 T 13-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal TREPR_2198 a1f5b2be878c1047dea62e3de097524e 464 SMART SM00885 30 182 5.0E-34 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal TREPR_2198 a1f5b2be878c1047dea62e3de097524e 464 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 131 432 4.0E-95 T 13-10-2018 IPR006500 DNA primase, phage/plasmid TREPR_2198 a1f5b2be878c1047dea62e3de097524e 464 Gene3D G3DSA:3.40.50.300 162 360 9.9E-7 T 13-10-2018 TREPR_2198 a1f5b2be878c1047dea62e3de097524e 464 SUPERFAMILY SSF52540 171 362 1.27E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2198 a1f5b2be878c1047dea62e3de097524e 464 Pfam PF08706 D5 N terminal like 30 181 3.8E-32 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal TREPR_0130 97df43638bbe919b3252141fa118992e 412 Pfam PF13180 PDZ domain 320 404 9.5E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_0130 97df43638bbe919b3252141fa118992e 412 Pfam PF13365 Trypsin-like peptidase domain 120 259 1.5E-34 T 13-10-2018 TREPR_0130 97df43638bbe919b3252141fa118992e 412 Gene3D G3DSA:2.40.10.120 74 294 2.4E-73 T 13-10-2018 TREPR_0130 97df43638bbe919b3252141fa118992e 412 SUPERFAMILY SSF50156 257 395 1.17E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 TREPR_0130 97df43638bbe919b3252141fa118992e 412 PRINTS PR00834 HtrA/DegQ protease family signature 230 247 9.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_0130 97df43638bbe919b3252141fa118992e 412 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 9.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_0130 97df43638bbe919b3252141fa118992e 412 PRINTS PR00834 HtrA/DegQ protease family signature 193 217 9.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_0130 97df43638bbe919b3252141fa118992e 412 PRINTS PR00834 HtrA/DegQ protease family signature 150 170 9.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_0130 97df43638bbe919b3252141fa118992e 412 PRINTS PR00834 HtrA/DegQ protease family signature 353 365 9.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_0130 97df43638bbe919b3252141fa118992e 412 PRINTS PR00834 HtrA/DegQ protease family signature 252 269 9.2E-48 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TREPR_0130 97df43638bbe919b3252141fa118992e 412 SUPERFAMILY SSF50494 87 295 1.48E-62 T 13-10-2018 IPR009003 Peptidase S1, PA clan TREPR_0130 97df43638bbe919b3252141fa118992e 412 Gene3D G3DSA:2.30.42.10 295 410 9.8E-19 T 13-10-2018 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 Hamap MF_01980 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 551 43.703 T 13-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 Gene3D G3DSA:3.40.50.450 10 500 1.9E-233 T 13-10-2018 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 PIRSF PIRSF005677 1 551 3.4E-243 T 13-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 Gene3D G3DSA:3.40.50.460 219 534 1.9E-233 T 13-10-2018 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 SUPERFAMILY SSF53784 5 548 1.96E-157 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 TIGRFAM TIGR02477 PFKA_PPi: diphosphate--fructose-6-phosphate 1-phosphotransferase 6 550 3.4E-257 T 13-10-2018 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB GO:0005524|GO:0006096|GO:0047334 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 Gene3D G3DSA:1.10.10.480 317 391 1.9E-233 T 13-10-2018 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 76 95 1.0E-11 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 301 313 1.0E-11 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 198 215 1.0E-11 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 165 181 1.0E-11 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_1621 c3ea15066dcd8730f13500638c053abc 551 Pfam PF00365 Phosphofructokinase 74 330 2.8E-37 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_2673 97e2dd3c7f5777e7921e2375990cc910 247 SUPERFAMILY SSF64005 11 231 9.81E-75 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TREPR_2673 97e2dd3c7f5777e7921e2375990cc910 247 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 236 36.97 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TREPR_2673 97e2dd3c7f5777e7921e2375990cc910 247 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 235 4.1E-70 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TREPR_2673 97e2dd3c7f5777e7921e2375990cc910 247 Gene3D G3DSA:3.40.1180.10 2 237 3.1E-82 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TREPR_2673 97e2dd3c7f5777e7921e2375990cc910 247 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 235 1.5E-70 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TREPR_2673 97e2dd3c7f5777e7921e2375990cc910 247 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 181 198 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 TREPR_0625 891c608462562807ef3ec37011ba17de 157 Pfam PF00293 NUDIX domain 34 136 8.3E-18 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TREPR_0625 891c608462562807ef3ec37011ba17de 157 ProSitePatterns PS00893 Nudix box signature. 56 77 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TREPR_0625 891c608462562807ef3ec37011ba17de 157 Gene3D G3DSA:3.90.79.10 27 156 4.2E-23 T 13-10-2018 TREPR_0625 891c608462562807ef3ec37011ba17de 157 SUPERFAMILY SSF55811 21 149 2.98E-25 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TREPR_0625 891c608462562807ef3ec37011ba17de 157 PRINTS PR00502 NUDIX hydrolase family signature 65 80 1.1E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TREPR_0625 891c608462562807ef3ec37011ba17de 157 PRINTS PR00502 NUDIX hydrolase family signature 51 65 1.1E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TREPR_0714 ac6c36f8dec1d4dff0ebb9946659200c 337 Pfam PF01551 Peptidase family M23 238 332 1.0E-29 T 13-10-2018 IPR016047 Peptidase M23 TREPR_0714 ac6c36f8dec1d4dff0ebb9946659200c 337 SMART SM00257 152 195 4.6E-5 T 13-10-2018 IPR018392 LysM domain TREPR_0714 ac6c36f8dec1d4dff0ebb9946659200c 337 SMART SM00257 102 146 1.3E-11 T 13-10-2018 IPR018392 LysM domain TREPR_0714 ac6c36f8dec1d4dff0ebb9946659200c 337 Gene3D G3DSA:3.10.350.10 149 200 8.9E-10 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_0714 ac6c36f8dec1d4dff0ebb9946659200c 337 Gene3D G3DSA:3.10.350.10 91 148 3.1E-10 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_0714 ac6c36f8dec1d4dff0ebb9946659200c 337 Gene3D G3DSA:2.70.70.10 201 337 1.0E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_0714 ac6c36f8dec1d4dff0ebb9946659200c 337 SUPERFAMILY SSF51261 102 334 3.61E-54 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_0714 ac6c36f8dec1d4dff0ebb9946659200c 337 Pfam PF01476 LysM domain 103 146 5.2E-10 T 13-10-2018 IPR018392 LysM domain TREPR_0714 ac6c36f8dec1d4dff0ebb9946659200c 337 Pfam PF01476 LysM domain 153 195 7.9E-7 T 13-10-2018 IPR018392 LysM domain TREPR_1171 7c4607813258ae62fac030387762fc41 494 Pfam PF05670 Domain of unknown function (DUF814) 372 456 4.6E-20 T 13-10-2018 IPR008532 Domain of unknown function DUF814 TREPR_1171 7c4607813258ae62fac030387762fc41 494 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 192 346 1.3E-27 T 13-10-2018 TREPR_1171 7c4607813258ae62fac030387762fc41 494 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 17 141 1.6E-17 T 13-10-2018 TREPR_1171 7c4607813258ae62fac030387762fc41 494 Gene3D G3DSA:2.30.310.10 5 152 8.5E-19 T 13-10-2018 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 SUPERFAMILY SSF52374 3 318 1.21E-109 T 13-10-2018 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 489 1.4E-158 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 325 2.4E-101 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 Gene3D G3DSA:3.40.50.620 1 334 8.1E-142 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 SUPERFAMILY SSF48163 319 491 6.93E-35 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 Gene3D G3DSA:1.10.10.350 391 499 3.5E-22 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.4E-25 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.4E-25 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 214 222 4.4E-25 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.4E-25 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 208 4.4E-25 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TREPR_2817 40868d3e1a0e3c9b0baa986b9764b2c6 500 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 491 32.065 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TREPR_2544 a177965a517474101b418a8041db6be2 667 Pfam PF08218 Citrate lyase ligase C-terminal domain 480 661 6.1E-64 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_2544 a177965a517474101b418a8041db6be2 667 SMART SM00764 480 661 3.1E-89 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_2544 a177965a517474101b418a8041db6be2 667 SUPERFAMILY SSF52374 478 665 6.95E-26 T 13-10-2018 TREPR_2544 a177965a517474101b418a8041db6be2 667 SUPERFAMILY SSF52266 296 418 3.92E-6 T 13-10-2018 TREPR_2544 a177965a517474101b418a8041db6be2 667 Gene3D G3DSA:3.40.50.620 482 667 1.1E-23 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2544 a177965a517474101b418a8041db6be2 667 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 461 662 2.0E-45 T 13-10-2018 TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 Pfam PF11867 Domain of unknown function (DUF3387) 711 1045 1.4E-91 T 13-10-2018 IPR021810 Protein of unknown function DUF3387 TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 6 710 2.8E-126 T 13-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 SMART SM00487 255 471 3.5E-9 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 202 3.1E-33 T 13-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 Pfam PF04851 Type III restriction enzyme, res subunit 260 444 3.2E-15 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 SUPERFAMILY SSF52540 284 704 2.63E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 SUPERFAMILY SSF52540 216 449 1.24E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 Gene3D G3DSA:3.90.640.50 35 112 4.0E-23 T 13-10-2018 TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 Gene3D G3DSA:3.40.50.300 258 458 6.3E-31 T 13-10-2018 TREPR_2280 902c2821076b35be6dd4307d93ac51b4 1078 Gene3D G3DSA:3.90.1570.50 5 245 4.0E-23 T 13-10-2018 TREPR_1808 e22aa1988f0e0aed8372072b8f6f888f 340 SUPERFAMILY SSF111337 1 339 1.31E-128 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TREPR_1808 e22aa1988f0e0aed8372072b8f6f888f 340 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 340 44.849 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TREPR_1808 e22aa1988f0e0aed8372072b8f6f888f 340 Gene3D G3DSA:2.40.10.240 64 160 1.1E-120 T 13-10-2018 TREPR_1808 e22aa1988f0e0aed8372072b8f6f888f 340 Pfam PF02547 Queuosine biosynthesis protein 4 339 8.5E-131 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TREPR_1808 e22aa1988f0e0aed8372072b8f6f888f 340 Gene3D G3DSA:3.40.1780.10 14 339 1.1E-120 T 13-10-2018 TREPR_1808 e22aa1988f0e0aed8372072b8f6f888f 340 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 7.3E-124 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TREPR_2065 1b8a13062431147f7ed73c96167bb3a7 153 Pfam PF00293 NUDIX domain 20 144 2.6E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TREPR_2065 1b8a13062431147f7ed73c96167bb3a7 153 Gene3D G3DSA:3.90.79.10 16 151 3.6E-32 T 13-10-2018 TREPR_2065 1b8a13062431147f7ed73c96167bb3a7 153 SUPERFAMILY SSF55811 17 148 1.9E-27 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TREPR_3505 777387edf4bbc3d180e0f25d9792e600 362 Pfam PF00072 Response regulator receiver domain 8 119 4.0E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3505 777387edf4bbc3d180e0f25d9792e600 362 SUPERFAMILY SSF52172 7 152 2.13E-34 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3505 777387edf4bbc3d180e0f25d9792e600 362 Gene3D G3DSA:1.10.3210.10 147 359 3.0E-66 T 13-10-2018 TREPR_3505 777387edf4bbc3d180e0f25d9792e600 362 SMART SM00471 167 317 0.0088 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_3505 777387edf4bbc3d180e0f25d9792e600 362 SUPERFAMILY SSF109604 159 345 1.57E-29 T 13-10-2018 TREPR_3505 777387edf4bbc3d180e0f25d9792e600 362 Pfam PF13487 HD domain 230 299 2.6E-17 T 13-10-2018 TREPR_3505 777387edf4bbc3d180e0f25d9792e600 362 Gene3D G3DSA:3.40.50.2300 1 146 1.2E-33 T 13-10-2018 TREPR_3505 777387edf4bbc3d180e0f25d9792e600 362 SMART SM00448 6 118 4.1E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2667 ebf4e6f6469f0d6ed8ae66a33dc49708 610 SUPERFAMILY SSF52540 360 604 1.2E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2667 ebf4e6f6469f0d6ed8ae66a33dc49708 610 Pfam PF00664 ABC transporter transmembrane region 46 323 5.0E-49 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TREPR_2667 ebf4e6f6469f0d6ed8ae66a33dc49708 610 Gene3D G3DSA:1.20.1560.10 9 355 6.9E-84 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_2667 ebf4e6f6469f0d6ed8ae66a33dc49708 610 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2667 ebf4e6f6469f0d6ed8ae66a33dc49708 610 SMART SM00382 394 580 4.5E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2667 ebf4e6f6469f0d6ed8ae66a33dc49708 610 Gene3D G3DSA:3.40.50.300 365 608 4.0E-84 T 13-10-2018 TREPR_2667 ebf4e6f6469f0d6ed8ae66a33dc49708 610 Pfam PF00005 ABC transporter 385 534 3.8E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2667 ebf4e6f6469f0d6ed8ae66a33dc49708 610 SUPERFAMILY SSF90123 25 350 2.35E-73 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 SUPERFAMILY SSF48592 6 522 9.16E-74 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 Gene3D G3DSA:1.10.560.10 7 522 1.4E-233 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 528 1.0E-259 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 SUPERFAMILY SSF52029 183 375 3.14E-82 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 8.0E-99 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 PRINTS PR00298 60kDa chaperonin signature 267 290 1.9E-72 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 PRINTS PR00298 60kDa chaperonin signature 26 52 1.9E-72 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 PRINTS PR00298 60kDa chaperonin signature 82 109 1.9E-72 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 PRINTS PR00298 60kDa chaperonin signature 349 374 1.9E-72 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 PRINTS PR00298 60kDa chaperonin signature 397 418 1.9E-72 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 Hamap MF_00600 60 kDa chaperonin [groL]. 1 546 42.282 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 SUPERFAMILY SSF54849 136 205 1.12E-24 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 Gene3D G3DSA:3.30.260.10 135 409 1.4E-233 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TREPR_0596 a68bfa7eb2ce2a824686ab0a2bc0e5d6 548 Gene3D G3DSA:3.50.7.10 191 371 1.4E-233 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily TREPR_3028 038d13657bd468db41e0d13dee641c6d 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 311 7.4E-44 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3028 038d13657bd468db41e0d13dee641c6d 323 Gene3D G3DSA:1.10.3720.10 86 307 5.4E-25 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3028 038d13657bd468db41e0d13dee641c6d 323 SUPERFAMILY SSF161098 91 298 1.96E-18 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2395 dbb8f757e47e0159e4e20e47cbd1d0db 353 Gene3D G3DSA:3.40.50.2000 4 179 8.4E-9 T 13-10-2018 TREPR_2395 dbb8f757e47e0159e4e20e47cbd1d0db 353 Pfam PF13439 Glycosyltransferase Family 4 17 169 1.2E-9 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TREPR_2395 dbb8f757e47e0159e4e20e47cbd1d0db 353 SUPERFAMILY SSF53756 4 351 7.85E-47 T 13-10-2018 TREPR_2395 dbb8f757e47e0159e4e20e47cbd1d0db 353 Gene3D G3DSA:3.40.50.2000 185 352 1.7E-23 T 13-10-2018 TREPR_2395 dbb8f757e47e0159e4e20e47cbd1d0db 353 Pfam PF00534 Glycosyl transferases group 1 183 312 7.8E-17 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_1851 3056ea128eeacb4712f0c50358624435 268 SMART SM00327 14 191 5.8E-5 T 13-10-2018 IPR002035 von Willebrand factor, type A TREPR_1851 3056ea128eeacb4712f0c50358624435 268 Pfam PF00092 von Willebrand factor type A domain 17 174 5.2E-6 T 13-10-2018 IPR002035 von Willebrand factor, type A TREPR_1851 3056ea128eeacb4712f0c50358624435 268 SUPERFAMILY SSF53300 17 172 7.31E-14 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_1851 3056ea128eeacb4712f0c50358624435 268 Gene3D G3DSA:3.40.50.410 16 194 2.1E-16 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 418 1.6E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 189 254 1.4E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 SUPERFAMILY SSF52172 555 684 2.56E-31 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 Gene3D G3DSA:3.30.565.10 253 424 1.2E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 SMART SM00387 301 420 9.5E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 SUPERFAMILY SSF47226 696 809 3.14E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 Pfam PF00072 Response regulator receiver domain 558 671 2.4E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 SMART SM00388 189 254 5.0E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 Pfam PF01627 Hpt domain 721 799 9.2E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 Gene3D G3DSA:1.10.287.130 155 252 2.3E-25 T 13-10-2018 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 Gene3D G3DSA:1.20.120.160 698 811 2.7E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 SUPERFAMILY SSF47384 178 256 2.94E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 Gene3D G3DSA:3.40.50.2300 551 686 5.7E-33 T 13-10-2018 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 SMART SM00448 556 671 1.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 6.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 6.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 6.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1249 077d784b59f6c1e9a2b91b52bcc9ee85 894 SUPERFAMILY SSF55874 243 420 6.02E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3344 fd5b1f5cd4f84c097b49632a1a310cd3 245 SUPERFAMILY SSF161098 20 208 1.44E-31 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3344 fd5b1f5cd4f84c097b49632a1a310cd3 245 Gene3D G3DSA:1.10.3720.10 1 221 2.8E-37 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3344 fd5b1f5cd4f84c097b49632a1a310cd3 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 7.9E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 Pfam PF14520 Helix-hairpin-helix domain 72 129 2.3E-12 T 13-10-2018 TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 171 3.2E-41 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 SMART SM00278 108 127 0.43 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 SMART SM00278 73 92 160.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 Pfam PF01330 RuvA N terminal domain 1 62 1.9E-13 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 Gene3D G3DSA:2.40.50.140 1 66 1.3E-15 T 13-10-2018 TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 Gene3D G3DSA:1.10.150.20 68 136 3.0E-20 T 13-10-2018 TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 SUPERFAMILY SSF47781 68 134 1.84E-16 T 13-10-2018 IPR010994 RuvA domain 2-like TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 SUPERFAMILY SSF50249 1 63 3.2E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1829 ecc3e37d93fb338c9eb86c289c6a07a4 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 195 25.453 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TREPR_1670 97148bda922d83be13f1f6903fda6e70 271 Gene3D G3DSA:3.40.50.300 6 265 2.4E-60 T 13-10-2018 TREPR_1670 97148bda922d83be13f1f6903fda6e70 271 SMART SM00382 39 227 1.1E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1670 97148bda922d83be13f1f6903fda6e70 271 SUPERFAMILY SSF52540 13 241 8.21E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1670 97148bda922d83be13f1f6903fda6e70 271 Pfam PF00005 ABC transporter 32 179 6.0E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3733 d04afc8bdbcbba654b0661f15f1881b8 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 181 1.9E-8 T 13-10-2018 IPR001451 Hexapeptide repeat TREPR_3733 d04afc8bdbcbba654b0661f15f1881b8 203 Gene3D G3DSA:2.160.10.10 2 203 1.8E-46 T 13-10-2018 TREPR_3733 d04afc8bdbcbba654b0661f15f1881b8 203 SUPERFAMILY SSF51161 21 202 2.24E-34 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 Pfam PF00490 Delta-aminolevulinic acid dehydratase 5 320 5.2E-141 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 SMART SM01004 2 321 4.3E-212 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 SUPERFAMILY SSF51569 3 323 8.64E-134 T 13-10-2018 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 Gene3D G3DSA:3.20.20.70 1 322 3.7E-143 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 3.0E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 3.0E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 3.0E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 120 134 3.0E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 3.0E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 3.0E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_0262 ccf3b0f92479a082ce4c261d3cc254bd 328 PIRSF PIRSF001415 1 324 1.5E-140 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TREPR_3518 9452ebcb12b98e11083cb8e2569f1be6 206 SMART SM00448 6 125 2.7E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3518 9452ebcb12b98e11083cb8e2569f1be6 206 Pfam PF00072 Response regulator receiver domain 8 125 5.9E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3518 9452ebcb12b98e11083cb8e2569f1be6 206 Gene3D G3DSA:3.40.50.12740 6 205 8.4E-46 T 13-10-2018 TREPR_3518 9452ebcb12b98e11083cb8e2569f1be6 206 SUPERFAMILY SSF52172 5 138 6.12E-24 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3518 9452ebcb12b98e11083cb8e2569f1be6 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 203 7.6E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3518 9452ebcb12b98e11083cb8e2569f1be6 206 SMART SM00421 150 206 1.4E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3518 9452ebcb12b98e11083cb8e2569f1be6 206 SUPERFAMILY SSF46894 145 203 6.12E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_0692 052574d0f980b98b4aee66385bc6f1c5 427 Gene3D G3DSA:1.10.3210.10 16 291 5.4E-61 T 13-10-2018 TREPR_0692 052574d0f980b98b4aee66385bc6f1c5 427 Pfam PF01966 HD domain 63 138 2.3E-8 T 13-10-2018 IPR006674 HD domain TREPR_0692 052574d0f980b98b4aee66385bc6f1c5 427 SUPERFAMILY SSF109604 16 314 9.1E-62 T 13-10-2018 TREPR_0692 052574d0f980b98b4aee66385bc6f1c5 427 SMART SM00471 59 195 4.5E-9 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 ProSitePatterns PS01014 Transcription termination factor nusG signature. 183 192 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 Pfam PF02357 Transcription termination factor nusG 20 128 2.5E-19 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 Pfam PF00467 KOW motif 150 177 1.9E-7 T 13-10-2018 IPR005824 KOW TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 PRINTS PR00338 Transcription termination factor NUSG signature 73 85 1.4E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 PRINTS PR00338 Transcription termination factor NUSG signature 176 192 1.4E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 PRINTS PR00338 Transcription termination factor NUSG signature 158 173 1.4E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 SUPERFAMILY SSF50104 146 200 1.46E-18 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 SMART SM00738 17 132 1.9E-25 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 20 200 4.5E-58 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 17 200 20.845 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 Gene3D G3DSA:3.30.70.940 14 140 2.5E-33 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 SMART SM00739 146 173 1.0E-4 T 13-10-2018 IPR005824 KOW TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 Gene3D G3DSA:2.30.30.30 141 200 4.4E-24 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 TREPR_0925 2dffe7d866926f02db87ed7ad5f6feb5 200 SUPERFAMILY SSF82679 19 132 1.57E-25 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TREPR_1288 2855c50fe30a4bbbbd5ffa2c999b6893 469 PIRSF PIRSF009451 1 468 1.2E-198 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 TREPR_1288 2855c50fe30a4bbbbd5ffa2c999b6893 469 Gene3D G3DSA:3.40.1080.10 199 468 2.2E-112 T 13-10-2018 TREPR_1288 2855c50fe30a4bbbbd5ffa2c999b6893 469 SUPERFAMILY SSF100950 200 466 4.61E-47 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_1288 2855c50fe30a4bbbbd5ffa2c999b6893 469 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 2 466 9.6E-174 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 TREPR_1288 2855c50fe30a4bbbbd5ffa2c999b6893 469 SUPERFAMILY SSF100950 1 198 1.38E-67 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_1288 2855c50fe30a4bbbbd5ffa2c999b6893 469 Gene3D G3DSA:3.40.1080.10 1 197 2.8E-89 T 13-10-2018 TREPR_1288 2855c50fe30a4bbbbd5ffa2c999b6893 469 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 2 468 1.1E-184 T 13-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Gene3D G3DSA:1.25.40.10 197 341 1.8E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Gene3D G3DSA:1.25.40.10 18 87 6.6E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Pfam PF00515 Tetratricopeptide repeat 403 432 1.2E-6 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SUPERFAMILY SSF48452 344 505 3.8E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SUPERFAMILY SSF48452 53 252 3.54E-37 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Gene3D G3DSA:1.25.40.10 342 440 2.9E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SUPERFAMILY SSF48452 284 358 9.49E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Pfam PF13414 TPR repeat 85 126 3.9E-10 T 13-10-2018 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Pfam PF13431 Tetratricopeptide repeat 135 165 3.0E-5 T 13-10-2018 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Gene3D G3DSA:1.25.40.10 441 506 1.7E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SMART SM00028 304 337 0.19 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SMART SM00028 44 77 0.23 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SMART SM00028 112 145 3.6E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SMART SM00028 401 434 4.1E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SMART SM00028 480 510 17.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SMART SM00028 440 473 0.13 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SMART SM00028 78 111 8.5E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SMART SM00028 146 179 6.6E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 SMART SM00028 366 399 0.023 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Gene3D G3DSA:1.25.40.10 88 184 1.4E-30 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Pfam PF13181 Tetratricopeptide repeat 44 76 8.2E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Pfam PF13181 Tetratricopeptide repeat 441 467 0.015 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3861 a8fccc555f49dba547eb69bd669636f9 529 Pfam PF13181 Tetratricopeptide repeat 481 505 0.0046 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0630 af56060440b04e93f81f7789976303aa 410 PIRSF PIRSF001434 26 409 5.3E-131 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0630 af56060440b04e93f81f7789976303aa 410 Gene3D G3DSA:3.40.640.10 32 275 6.1E-81 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0630 af56060440b04e93f81f7789976303aa 410 Gene3D G3DSA:3.90.1150.10 276 410 6.7E-45 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0630 af56060440b04e93f81f7789976303aa 410 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 34 406 7.2E-138 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_0630 af56060440b04e93f81f7789976303aa 410 SUPERFAMILY SSF53383 46 408 2.28E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0630 af56060440b04e93f81f7789976303aa 410 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 217 231 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 Gene3D G3DSA:3.30.565.10 1 243 2.4E-71 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 635 29.84 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 SUPERFAMILY SSF110942 521 634 7.19E-34 T 13-10-2018 IPR037196 HSP90, C-terminal domain TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 SUPERFAMILY SSF54211 249 499 2.43E-88 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 169 3.1E-11 T 13-10-2018 TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 Gene3D G3DSA:3.40.50.11260 415 501 5.9E-27 T 13-10-2018 TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 PRINTS PR00775 90kDa heat shock protein signature 2 22 1.5E-26 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 PRINTS PR00775 90kDa heat shock protein signature 23 45 1.5E-26 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 PRINTS PR00775 90kDa heat shock protein signature 202 220 1.5E-26 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 PRINTS PR00775 90kDa heat shock protein signature 184 201 1.5E-26 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 Gene3D G3DSA:1.20.120.790 503 635 3.0E-45 T 13-10-2018 IPR037196 HSP90, C-terminal domain TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 PIRSF PIRSF002583 1 635 4.2E-205 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 Pfam PF00183 Hsp90 protein 227 634 1.3E-116 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 SUPERFAMILY SSF55874 2 225 2.84E-58 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 Gene3D G3DSA:3.30.230.80 248 414 5.1E-64 T 13-10-2018 TREPR_3196 eaa794bef168187cdd1ef9fd6258cccd 635 SMART SM00387 24 196 1.5E-4 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1798 d030e4c2c91188f220acc29e8b10f6bd 506 SUPERFAMILY SSF51735 337 503 1.56E-27 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1798 d030e4c2c91188f220acc29e8b10f6bd 506 Gene3D G3DSA:3.40.50.720 336 474 3.7E-63 T 13-10-2018 TREPR_1798 d030e4c2c91188f220acc29e8b10f6bd 506 SUPERFAMILY SSF53223 232 336 1.78E-22 T 13-10-2018 TREPR_1798 d030e4c2c91188f220acc29e8b10f6bd 506 Gene3D G3DSA:3.40.50.10860 242 494 3.7E-63 T 13-10-2018 TREPR_1798 d030e4c2c91188f220acc29e8b10f6bd 506 Pfam PF01487 Type I 3-dehydroquinase 5 230 5.5E-47 T 13-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TREPR_1798 d030e4c2c91188f220acc29e8b10f6bd 506 SUPERFAMILY SSF51569 2 232 2.42E-39 T 13-10-2018 TREPR_1798 d030e4c2c91188f220acc29e8b10f6bd 506 Gene3D G3DSA:3.20.20.70 1 238 1.9E-45 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1798 d030e4c2c91188f220acc29e8b10f6bd 506 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 244 324 2.1E-17 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 TREPR_1701 7da92d9bc0eafc6d82bddda249fa9925 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 309 320 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1701 7da92d9bc0eafc6d82bddda249fa9925 342 Pfam PF17179 4Fe-4S dicluster domain 227 323 1.9E-32 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_1701 7da92d9bc0eafc6d82bddda249fa9925 342 SUPERFAMILY SSF46548 226 339 1.92E-16 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_1701 7da92d9bc0eafc6d82bddda249fa9925 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 228 239 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1701 7da92d9bc0eafc6d82bddda249fa9925 342 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 1 338 7.6E-149 T 13-10-2018 IPR014259 Sulphite reductase, subunit A TREPR_3088 f7af0f31e6269001ae1744f0cc7bd7a3 269 Gene3D G3DSA:3.40.190.10 42 260 1.7E-44 T 13-10-2018 TREPR_3088 f7af0f31e6269001ae1744f0cc7bd7a3 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 2.5E-39 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_3088 f7af0f31e6269001ae1744f0cc7bd7a3 269 Gene3D G3DSA:3.40.190.10 107 223 1.7E-44 T 13-10-2018 TREPR_3088 f7af0f31e6269001ae1744f0cc7bd7a3 269 SUPERFAMILY SSF53850 1 263 1.14E-44 T 13-10-2018 TREPR_3088 f7af0f31e6269001ae1744f0cc7bd7a3 269 SMART SM00062 39 263 4.0E-41 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0240 9d28a6c6a4decd707067e631562385b2 676 Gene3D G3DSA:3.20.20.80 13 346 2.7E-92 T 13-10-2018 TREPR_0240 9d28a6c6a4decd707067e631562385b2 676 Gene3D G3DSA:3.20.20.80 468 672 9.8E-41 T 13-10-2018 TREPR_0240 9d28a6c6a4decd707067e631562385b2 676 Pfam PF02446 4-alpha-glucanotransferase 23 647 1.6E-135 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TREPR_0240 9d28a6c6a4decd707067e631562385b2 676 SUPERFAMILY SSF51445 17 662 3.22E-113 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_3491 c2e5fc8e7ce48925ca94c6f07e6d8ce4 482 SUPERFAMILY SSF54675 2 133 4.56E-48 T 13-10-2018 TREPR_3491 c2e5fc8e7ce48925ca94c6f07e6d8ce4 482 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 150 264 3.3E-8 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 TREPR_3491 c2e5fc8e7ce48925ca94c6f07e6d8ce4 482 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 467 6.6E-182 T 13-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 TREPR_3491 c2e5fc8e7ce48925ca94c6f07e6d8ce4 482 SUPERFAMILY SSF51690 134 478 3.68E-114 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 TREPR_3491 c2e5fc8e7ce48925ca94c6f07e6d8ce4 482 PIRSF PIRSF000484 1 480 3.5E-157 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 TREPR_3491 c2e5fc8e7ce48925ca94c6f07e6d8ce4 482 Gene3D G3DSA:3.20.140.10 6 471 2.1E-180 T 13-10-2018 TREPR_3491 c2e5fc8e7ce48925ca94c6f07e6d8ce4 482 Gene3D G3DSA:3.20.20.70 146 314 2.1E-180 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1854 e0c5acf0a110ff45a8685ef1e7028968 387 Pfam PF03781 Sulfatase-modifying factor enzyme 1 141 347 5.9E-31 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TREPR_1854 e0c5acf0a110ff45a8685ef1e7028968 387 SUPERFAMILY SSF56436 141 355 3.06E-47 T 13-10-2018 IPR016187 C-type lectin fold TREPR_1854 e0c5acf0a110ff45a8685ef1e7028968 387 Gene3D G3DSA:3.90.1580.10 138 360 2.2E-51 T 13-10-2018 TREPR_0178 85aff44e876daaa5759574bdfd154a9f 316 Gene3D G3DSA:1.10.8.300 204 309 7.2E-20 T 13-10-2018 TREPR_0178 85aff44e876daaa5759574bdfd154a9f 316 PIRSF PIRSF002849 1 311 1.5E-111 T 13-10-2018 TREPR_0178 85aff44e876daaa5759574bdfd154a9f 316 Gene3D G3DSA:3.40.50.300 18 190 3.1E-40 T 13-10-2018 TREPR_0178 85aff44e876daaa5759574bdfd154a9f 316 SUPERFAMILY SSF52540 24 289 1.19E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0178 85aff44e876daaa5759574bdfd154a9f 316 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 173 6.7E-57 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.2E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.2E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.2E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.2E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.2E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.2E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 PIRSF PIRSF002133 1 124 1.6E-56 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 SUPERFAMILY SSF50249 2 123 1.46E-53 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.7E-43 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 Gene3D G3DSA:2.40.50.140 1 124 1.5E-64 T 13-10-2018 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.436 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1471 f3c46fa40bfbd51880c7ea4e5ed407fb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.0E-70 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0157 02034bf374e6376d20054d25f42a484e 570 SUPERFAMILY SSF56801 8 557 4.45E-134 T 13-10-2018 TREPR_0157 02034bf374e6376d20054d25f42a484e 570 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 13-10-2018 IPR020845 AMP-binding, conserved site TREPR_0157 02034bf374e6376d20054d25f42a484e 570 Gene3D G3DSA:3.40.50.12780 4 450 1.3E-134 T 13-10-2018 TREPR_0157 02034bf374e6376d20054d25f42a484e 570 Pfam PF13193 AMP-binding enzyme C-terminal domain 466 544 1.2E-22 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TREPR_0157 02034bf374e6376d20054d25f42a484e 570 Gene3D G3DSA:3.30.300.310 453 558 4.3E-29 T 13-10-2018 TREPR_0157 02034bf374e6376d20054d25f42a484e 570 Pfam PF00501 AMP-binding enzyme 40 457 1.4E-66 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TREPR_1298 db148b6cd898ae15b2811ca988983911 329 SMART SM00345 18 77 1.0E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_1298 db148b6cd898ae15b2811ca988983911 329 SUPERFAMILY SSF46785 11 81 4.45E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1298 db148b6cd898ae15b2811ca988983911 329 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 2.8E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_1298 db148b6cd898ae15b2811ca988983911 329 Gene3D G3DSA:1.10.10.10 11 132 7.5E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1315 05a0c5eb985d6e81509287109fe988b4 356 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 67 313 3.8E-55 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TREPR_1315 05a0c5eb985d6e81509287109fe988b4 356 Gene3D G3DSA:3.40.190.170 56 356 3.8E-78 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TREPR_1315 05a0c5eb985d6e81509287109fe988b4 356 PIRSF PIRSF006470 25 356 3.2E-71 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 TREPR_1315 05a0c5eb985d6e81509287109fe988b4 356 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 65 341 3.8E-63 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TREPR_0648 98182450dae08b41972c2b24a928ffec 663 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 657 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TREPR_0648 98182450dae08b41972c2b24a928ffec 663 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 660 41.601 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TREPR_0648 98182450dae08b41972c2b24a928ffec 663 Pfam PF12344 Ultra-violet resistance protein B 549 590 4.4E-20 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain TREPR_0648 98182450dae08b41972c2b24a928ffec 663 Gene3D G3DSA:3.40.50.300 1 215 6.1E-71 T 13-10-2018 TREPR_0648 98182450dae08b41972c2b24a928ffec 663 Gene3D G3DSA:3.40.50.300 412 593 7.5E-48 T 13-10-2018 TREPR_0648 98182450dae08b41972c2b24a928ffec 663 SUPERFAMILY SSF52540 36 569 2.71E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0648 98182450dae08b41972c2b24a928ffec 663 Gene3D G3DSA:4.10.860.10 613 661 9.6E-13 T 13-10-2018 TREPR_0648 98182450dae08b41972c2b24a928ffec 663 SUPERFAMILY SSF46600 615 660 3.27E-11 T 13-10-2018 IPR036876 UVR domain superfamily TREPR_0648 98182450dae08b41972c2b24a928ffec 663 Pfam PF04851 Type III restriction enzyme, res subunit 15 137 4.6E-10 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TREPR_0648 98182450dae08b41972c2b24a928ffec 663 SUPERFAMILY SSF52540 4 412 1.96E-125 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0648 98182450dae08b41972c2b24a928ffec 663 Pfam PF02151 UvrB/uvrC motif 625 658 1.5E-7 T 13-10-2018 IPR001943 UVR domain GO:0005515 TREPR_0648 98182450dae08b41972c2b24a928ffec 663 SMART SM00487 8 422 8.9E-21 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_0648 98182450dae08b41972c2b24a928ffec 663 SMART SM00490 457 543 1.0E-19 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_0648 98182450dae08b41972c2b24a928ffec 663 Gene3D G3DSA:3.40.50.300 265 411 4.2E-49 T 13-10-2018 TREPR_0648 98182450dae08b41972c2b24a928ffec 663 Pfam PF00271 Helicase conserved C-terminal domain 438 542 2.4E-17 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1940 ef5c251d0c5ef099a3dfb97dc496358b 280 Gene3D G3DSA:3.30.70.660 140 277 6.4E-31 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 TREPR_1940 ef5c251d0c5ef099a3dfb97dc496358b 280 Gene3D G3DSA:3.30.70.580 3 139 7.3E-31 T 13-10-2018 TREPR_1940 ef5c251d0c5ef099a3dfb97dc496358b 280 PIRSF PIRSF001430 5 280 1.5E-61 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1940 ef5c251d0c5ef099a3dfb97dc496358b 280 SUPERFAMILY SSF55120 6 278 2.3E-66 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1940 ef5c251d0c5ef099a3dfb97dc496358b 280 Pfam PF01416 tRNA pseudouridine synthase 52 138 1.2E-7 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1940 ef5c251d0c5ef099a3dfb97dc496358b 280 Pfam PF01416 tRNA pseudouridine synthase 178 278 1.8E-16 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1940 ef5c251d0c5ef099a3dfb97dc496358b 280 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 6 278 29.608 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_3426 ff5ca026afbea77aafe0fed7ce6aad3d 329 Pfam PF13353 4Fe-4S single cluster domain 56 160 8.7E-8 T 13-10-2018 TREPR_3426 ff5ca026afbea77aafe0fed7ce6aad3d 329 Gene3D G3DSA:3.20.20.70 53 252 3.4E-11 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3426 ff5ca026afbea77aafe0fed7ce6aad3d 329 Pfam PF04055 Radical SAM superfamily 64 197 8.2E-11 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_3426 ff5ca026afbea77aafe0fed7ce6aad3d 329 SUPERFAMILY SSF102114 65 183 3.01E-11 T 13-10-2018 TREPR_3426 ff5ca026afbea77aafe0fed7ce6aad3d 329 ProSitePatterns PS01087 Radical activating enzymes signature. 57 78 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 Gene3D G3DSA:1.10.1790.10 814 907 7.1E-7 T 13-10-2018 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 SUPERFAMILY SSF52540 101 331 1.63E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 Pfam PF03610 PTS system fructose IIA component 553 622 7.7E-5 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 Gene3D G3DSA:1.10.1790.10 444 543 3.4E-19 T 13-10-2018 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 SUPERFAMILY SSF63520 817 904 1.83E-10 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 114 127 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 SUPERFAMILY SSF53062 552 668 4.19E-14 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 183 198 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 SMART SM00382 110 274 3.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 SUPERFAMILY SSF63520 444 542 1.06E-18 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 SUPERFAMILY SSF46785 4 59 9.1E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 Gene3D G3DSA:3.40.50.510 548 674 9.0E-26 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 Pfam PF00874 PRD domain 820 905 2.4E-7 T 13-10-2018 IPR011608 PRD domain GO:0006355 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 Pfam PF00874 PRD domain 474 538 1.0E-16 T 13-10-2018 IPR011608 PRD domain GO:0006355 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 Gene3D G3DSA:3.40.50.300 87 263 3.0E-42 T 13-10-2018 TREPR_0465 6747c4647ff44168b90e422224b58d3a 917 Pfam PF00158 Sigma-54 interaction domain 90 253 2.1E-46 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TREPR_0662 ed0ed9dbce46f6ef90162073419113a5 96 Gene3D G3DSA:3.30.70.1060 1 91 5.0E-5 T 13-10-2018 TREPR_0662 ed0ed9dbce46f6ef90162073419113a5 96 Pfam PF03795 YCII-related domain 17 83 6.5E-6 T 13-10-2018 IPR005545 YCII-related TREPR_0662 ed0ed9dbce46f6ef90162073419113a5 96 SUPERFAMILY SSF54909 14 84 1.45E-11 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel TREPR_0935 dd8f48db628acdc57fc782ac0d9de13d 298 SUPERFAMILY SSF161098 91 278 1.23E-27 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0935 dd8f48db628acdc57fc782ac0d9de13d 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 297 1.5E-32 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0935 dd8f48db628acdc57fc782ac0d9de13d 298 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 73 7.4E-13 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_0935 dd8f48db628acdc57fc782ac0d9de13d 298 Gene3D G3DSA:1.10.3720.10 87 293 4.1E-21 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3258 c2c0a2d220bdec5de3a0bf93ec76a41f 214 Gene3D G3DSA:1.25.40.10 32 202 2.4E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3258 c2c0a2d220bdec5de3a0bf93ec76a41f 214 SUPERFAMILY SSF48452 38 163 5.26E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3258 c2c0a2d220bdec5de3a0bf93ec76a41f 214 Pfam PF13432 Tetratricopeptide repeat 34 72 0.0096 T 13-10-2018 TREPR_3258 c2c0a2d220bdec5de3a0bf93ec76a41f 214 Pfam PF13432 Tetratricopeptide repeat 115 144 0.0051 T 13-10-2018 TREPR_1668 681a41f8f93ab499f8e62c46f2a082d0 403 SUPERFAMILY SSF53218 168 312 4.58E-31 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily TREPR_1668 681a41f8f93ab499f8e62c46f2a082d0 403 SUPERFAMILY SSF63882 6 166 4.84E-31 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1668 681a41f8f93ab499f8e62c46f2a082d0 403 Gene3D G3DSA:3.90.105.10 25 165 2.3E-72 T 13-10-2018 TREPR_1668 681a41f8f93ab499f8e62c46f2a082d0 403 Gene3D G3DSA:3.40.980.10 24 317 2.3E-72 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily TREPR_1668 681a41f8f93ab499f8e62c46f2a082d0 403 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 156 1.1E-25 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1668 681a41f8f93ab499f8e62c46f2a082d0 403 SMART SM00852 171 309 1.7E-17 T 13-10-2018 IPR001453 MoaB/Mog domain TREPR_1668 681a41f8f93ab499f8e62c46f2a082d0 403 Pfam PF00994 Probable molybdopterin binding domain 172 302 3.0E-15 T 13-10-2018 IPR001453 MoaB/Mog domain TREPR_1668 681a41f8f93ab499f8e62c46f2a082d0 403 Gene3D G3DSA:2.40.340.10 318 358 2.3E-72 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1668 681a41f8f93ab499f8e62c46f2a082d0 403 Gene3D G3DSA:2.170.190.11 49 132 2.3E-72 T 13-10-2018 TREPR_0072 38afe0c2fd8b48fa2019bf0a8035ca62 426 SUPERFAMILY SSF55205 1 423 8.67E-106 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TREPR_0072 38afe0c2fd8b48fa2019bf0a8035ca62 426 Gene3D G3DSA:3.65.10.10 6 421 2.2E-145 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TREPR_0072 38afe0c2fd8b48fa2019bf0a8035ca62 426 Gene3D G3DSA:3.65.10.10 21 228 2.2E-145 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TREPR_0072 38afe0c2fd8b48fa2019bf0a8035ca62 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 413 2.0E-62 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TREPR_0072 38afe0c2fd8b48fa2019bf0a8035ca62 426 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 2.1E-148 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_0072 38afe0c2fd8b48fa2019bf0a8035ca62 426 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 36.114 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TREPR_1383 e0a9fb125b2435da6603dc3b94fa09f5 319 Gene3D G3DSA:2.40.30.170 57 232 2.6E-89 T 13-10-2018 TREPR_1383 e0a9fb125b2435da6603dc3b94fa09f5 319 Gene3D G3DSA:2.40.420.20 49 309 2.6E-89 T 13-10-2018 TREPR_1383 e0a9fb125b2435da6603dc3b94fa09f5 319 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 118 308 1.2E-40 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TREPR_1383 e0a9fb125b2435da6603dc3b94fa09f5 319 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 114 221 3.3E-25 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TREPR_1383 e0a9fb125b2435da6603dc3b94fa09f5 319 Gene3D G3DSA:2.40.50.100 75 146 2.6E-89 T 13-10-2018 TREPR_1383 e0a9fb125b2435da6603dc3b94fa09f5 319 SUPERFAMILY SSF111369 64 225 7.32E-10 T 13-10-2018 TREPR_2356 99775538de5988124131d25e97379b25 512 SUPERFAMILY SSF51735 146 412 6.8E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2356 99775538de5988124131d25e97379b25 512 SUPERFAMILY SSF51735 8 136 2.68E-16 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2356 99775538de5988124131d25e97379b25 512 Gene3D G3DSA:3.40.50.720 4 130 4.1E-27 T 13-10-2018 TREPR_2356 99775538de5988124131d25e97379b25 512 Gene3D G3DSA:3.40.50.720 144 453 7.1E-108 T 13-10-2018 TREPR_2356 99775538de5988124131d25e97379b25 512 Pfam PF02719 Polysaccharide biosynthesis protein 149 436 1.2E-110 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain TREPR_2356 99775538de5988124131d25e97379b25 512 Pfam PF13727 CoA-binding domain 9 94 1.4E-6 T 13-10-2018 TREPR_2182 610a6dcbfe79e717724caf6854a1b9e4 184 SUPERFAMILY SSF55729 33 173 7.71E-6 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_2182 610a6dcbfe79e717724caf6854a1b9e4 184 Gene3D G3DSA:3.40.630.30 7 177 1.3E-30 T 13-10-2018 TREPR_3574 9c96cecb93427f1da45eedc352f0874b 405 SUPERFAMILY SSF52540 20 207 6.14E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3574 9c96cecb93427f1da45eedc352f0874b 405 Pfam PF13635 Domain of unknown function (DUF4143) 202 349 2.7E-11 T 13-10-2018 IPR025420 Domain of unknown function DUF4143 TREPR_3574 9c96cecb93427f1da45eedc352f0874b 405 Pfam PF13173 AAA domain 19 149 1.4E-34 T 13-10-2018 TREPR_1396 22351e67fdc1b6f54fa01f8c7f2cd1c1 500 Gene3D G3DSA:3.30.450.90 81 221 1.4E-41 T 13-10-2018 TREPR_1396 22351e67fdc1b6f54fa01f8c7f2cd1c1 500 SMART SM00382 248 369 2.2E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1396 22351e67fdc1b6f54fa01f8c7f2cd1c1 500 SUPERFAMILY SSF52540 99 491 1.33E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1396 22351e67fdc1b6f54fa01f8c7f2cd1c1 500 Gene3D G3DSA:3.40.50.300 222 495 6.2E-106 T 13-10-2018 TREPR_1396 22351e67fdc1b6f54fa01f8c7f2cd1c1 500 Pfam PF00437 Type II/IV secretion system protein 120 387 1.8E-72 T 13-10-2018 IPR001482 Type II/IV secretion system protein TREPR_2507 e1bd6bb344c4336eac22d719b7039efe 424 Gene3D G3DSA:3.40.190.10 29 424 5.9E-65 T 13-10-2018 TREPR_2507 e1bd6bb344c4336eac22d719b7039efe 424 SUPERFAMILY SSF53850 20 423 2.85E-54 T 13-10-2018 TREPR_2507 e1bd6bb344c4336eac22d719b7039efe 424 Pfam PF13416 Bacterial extracellular solute-binding protein 70 366 3.2E-23 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_2342 6344f6e79267f4fb89bbd715c6545809 267 Hamap MF_01805 Segregation and condensation protein A [scpA]. 9 240 20.519 T 13-10-2018 IPR003768 Segregation and condensation protein A TREPR_2342 6344f6e79267f4fb89bbd715c6545809 267 Pfam PF02616 Segregation and condensation protein ScpA 26 236 1.2E-29 T 13-10-2018 IPR003768 Segregation and condensation protein A TREPR_0001 02fe075f14e34d7d14a79d0d798f2b77 405 Pfam PF01757 Acyltransferase family 7 339 2.9E-25 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 TREPR_1844 8b0c784663adcb6a303b3ffe533576a8 536 Gene3D G3DSA:3.80.30.20 222 453 1.3E-65 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TREPR_1844 8b0c784663adcb6a303b3ffe533576a8 536 SMART SM00729 223 438 1.3E-39 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_1844 8b0c784663adcb6a303b3ffe533576a8 536 SUPERFAMILY SSF102114 211 445 3.53E-47 T 13-10-2018 TREPR_1844 8b0c784663adcb6a303b3ffe533576a8 536 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 469 1.1E-109 T 13-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 TREPR_1844 8b0c784663adcb6a303b3ffe533576a8 536 Pfam PF00919 Uncharacterized protein family UPF0004 4 101 3.1E-16 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TREPR_1844 8b0c784663adcb6a303b3ffe533576a8 536 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 227 247 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TREPR_1844 8b0c784663adcb6a303b3ffe533576a8 536 Pfam PF04055 Radical SAM superfamily 229 398 9.6E-21 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_1844 8b0c784663adcb6a303b3ffe533576a8 536 Gene3D G3DSA:3.40.50.12160 2 113 2.2E-13 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TREPR_3441 0b2cb76d8d9f51c3aebbe8e3393275cf 576 Pfam PF17239 Family of unknown function (DUF5312) 6 563 6.4E-149 T 13-10-2018 IPR035196 Protein of unknown function DUF5312 TREPR_0904 9113566f8875a0267bcb2ac551d972fd 982 Gene3D G3DSA:3.20.20.140 5 140 3.5E-22 T 13-10-2018 TREPR_0904 9113566f8875a0267bcb2ac551d972fd 982 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 252 653 9.0E-100 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_0904 9113566f8875a0267bcb2ac551d972fd 982 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 148 942 3.5E-143 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_0904 9113566f8875a0267bcb2ac551d972fd 982 Gene3D G3DSA:3.20.20.140 144 229 1.7E-6 T 13-10-2018 TREPR_0904 9113566f8875a0267bcb2ac551d972fd 982 Pfam PF14579 Helix-hairpin-helix motif 725 804 8.4E-18 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_0904 9113566f8875a0267bcb2ac551d972fd 982 Pfam PF02811 PHP domain 9 119 1.1E-13 T 13-10-2018 IPR004013 PHP domain GO:0003824 TREPR_0904 9113566f8875a0267bcb2ac551d972fd 982 SMART SM00481 9 70 7.2E-7 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TREPR_0904 9113566f8875a0267bcb2ac551d972fd 982 SUPERFAMILY SSF89550 10 70 3.34E-6 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TREPR_2564 72b098c218b0327dd3588a20959680b8 322 Pfam PF00589 Phage integrase family 152 303 6.6E-41 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TREPR_2564 72b098c218b0327dd3588a20959680b8 322 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 317 51.813 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD TREPR_2564 72b098c218b0327dd3588a20959680b8 322 Gene3D G3DSA:1.10.443.10 132 311 2.1E-55 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_2564 72b098c218b0327dd3588a20959680b8 322 SUPERFAMILY SSF56349 24 310 3.24E-54 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_2564 72b098c218b0327dd3588a20959680b8 322 Gene3D G3DSA:1.10.150.130 23 117 6.1E-21 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal TREPR_2564 72b098c218b0327dd3588a20959680b8 322 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 107 1.1E-16 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TREPR_2826 2c52e329545310be1c4be6428b199f75 880 SUPERFAMILY SSF82866 176 375 6.15E-29 T 13-10-2018 TREPR_2826 2c52e329545310be1c4be6428b199f75 880 Pfam PF03176 MMPL family 653 864 8.8E-22 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TREPR_2826 2c52e329545310be1c4be6428b199f75 880 Pfam PF03176 MMPL family 128 389 1.6E-24 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TREPR_2826 2c52e329545310be1c4be6428b199f75 880 SUPERFAMILY SSF82866 664 867 1.1E-33 T 13-10-2018 TREPR_2826 2c52e329545310be1c4be6428b199f75 880 Gene3D G3DSA:1.20.1640.10 174 388 3.4E-16 T 13-10-2018 TREPR_2826 2c52e329545310be1c4be6428b199f75 880 Gene3D G3DSA:1.20.1640.10 693 870 3.4E-14 T 13-10-2018 TREPR_2143 ff4a69573b822c45be79d1b65990adfb 335 SMART SM00062 39 271 0.0073 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_2143 ff4a69573b822c45be79d1b65990adfb 335 SUPERFAMILY SSF53850 39 261 9.06E-26 T 13-10-2018 TREPR_2143 ff4a69573b822c45be79d1b65990adfb 335 Pfam PF09084 NMT1/THI5 like 55 260 1.2E-13 T 13-10-2018 IPR015168 SsuA/THI5-like TREPR_2143 ff4a69573b822c45be79d1b65990adfb 335 Gene3D G3DSA:3.40.190.10 38 155 7.0E-11 T 13-10-2018 TREPR_2143 ff4a69573b822c45be79d1b65990adfb 335 Gene3D G3DSA:3.40.190.10 156 327 1.7E-14 T 13-10-2018 TREPR_0461 c20b52e2baf977dd1cd55e7b7de1a719 451 Gene3D G3DSA:3.40.50.1100 120 240 7.7E-177 T 13-10-2018 TREPR_0461 c20b52e2baf977dd1cd55e7b7de1a719 451 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 78 396 1.3E-53 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TREPR_0461 c20b52e2baf977dd1cd55e7b7de1a719 451 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 112 126 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 TREPR_0461 c20b52e2baf977dd1cd55e7b7de1a719 451 Gene3D G3DSA:3.40.50.1100 29 443 7.7E-177 T 13-10-2018 TREPR_0461 c20b52e2baf977dd1cd55e7b7de1a719 451 SUPERFAMILY SSF53686 61 443 2.61E-51 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TREPR_0461 c20b52e2baf977dd1cd55e7b7de1a719 451 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 451 217.966 T 13-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 TREPR_0461 c20b52e2baf977dd1cd55e7b7de1a719 451 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 17 442 8.4E-188 T 13-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 Pfam PF08402 TOBE domain 301 371 4.2E-8 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 Gene3D G3DSA:2.40.50.940 242 368 3.5E-10 T 13-10-2018 TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 SUPERFAMILY SSF52540 18 260 1.16E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 SUPERFAMILY SSF50331 257 371 1.46E-13 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 54 371 3.3E-108 T 13-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 Gene3D G3DSA:2.40.50.140 306 363 3.5E-10 T 13-10-2018 TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 SMART SM00382 48 231 6.9E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 Pfam PF00005 ABC transporter 40 181 3.7E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1980 75da7934d96f112e90cbc3ac4e7a2913 379 Gene3D G3DSA:3.40.50.300 18 241 1.0E-65 T 13-10-2018 TREPR_3556 772821e39548436ea642212c6ebd5f20 66 SUPERFAMILY SSF141694 2 41 2.88E-5 T 13-10-2018 TREPR_3708 bc99779f2d3d049b5c1811202f74cdec 85 TIGRFAM TIGR03905 TIGR03905_4_Cys: uncharacterized protein TIGR03905 3 77 1.2E-32 T 13-10-2018 IPR023806 Conserved hypothetical protein CHP03905 TREPR_3708 bc99779f2d3d049b5c1811202f74cdec 85 Pfam PF12637 TSCPD domain 4 76 2.4E-31 T 13-10-2018 IPR024434 TSCPD domain TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 16 207 1.7E-39 T 13-10-2018 IPR003111 Lon, substrate-binding domain TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 SUPERFAMILY SSF88697 16 206 4.97E-33 T 13-10-2018 IPR015947 PUA-like superfamily TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 SMART SM00382 354 499 1.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 Gene3D G3DSA:2.30.130.40 10 123 1.5E-21 T 13-10-2018 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 609 811 2.1E-77 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 SUPERFAMILY SSF54211 634 810 5.31E-50 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 362 381 9.5E-49 T 13-10-2018 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 634 650 9.5E-49 T 13-10-2018 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 713 732 9.5E-49 T 13-10-2018 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 743 762 9.5E-49 T 13-10-2018 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 766 784 9.5E-49 T 13-10-2018 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 SUPERFAMILY SSF52540 317 623 2.8E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 358 496 1.8E-22 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 SMART SM00464 16 207 6.4E-55 T 13-10-2018 IPR003111 Lon, substrate-binding domain TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 Hamap MF_01973 Lon protease [lon]. 17 812 62.784 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 TIGRFAM TIGR00763 lon: endopeptidase La 19 810 8.2E-296 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 Gene3D G3DSA:1.20.58.1480 126 249 1.7E-35 T 13-10-2018 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 Gene3D G3DSA:3.40.50.300 319 497 1.8E-64 T 13-10-2018 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 Gene3D G3DSA:3.30.230.10 626 812 4.9E-74 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 PIRSF PIRSF001174 4 813 1.7E-292 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 716 724 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 TREPR_3771 8b07526d0d16d26ba57d8d32cba5f0cd 813 Gene3D G3DSA:1.10.8.60 498 592 6.7E-25 T 13-10-2018 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 2.1E-142 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 Gene3D G3DSA:1.10.287.40 1 103 2.7E-20 T 13-10-2018 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 PIRSF PIRSF001529 1 424 2.1E-141 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 Gene3D G3DSA:3.30.930.10 104 425 2.1E-130 T 13-10-2018 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 SUPERFAMILY SSF55681 116 421 1.55E-87 T 13-10-2018 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 217 398 1.2E-30 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 SUPERFAMILY SSF46589 1 111 2.35E-19 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 1.5E-18 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 6.9E-26 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 6.9E-26 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 6.9E-26 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 6.9E-26 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 6.9E-26 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TREPR_1075 f18a93bddb68c3edc29715372d2a12bb 427 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 37.394 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 Gene3D G3DSA:3.80.10.10 372 545 3.9E-40 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SUPERFAMILY SSF52058 179 283 6.35E-12 T 13-10-2018 TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SUPERFAMILY SSF48029 3 89 1.1E-7 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SUPERFAMILY SSF52058 263 525 1.7E-50 T 13-10-2018 TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 Pfam PF13855 Leucine rich repeat 435 493 3.5E-9 T 13-10-2018 IPR001611 Leucine-rich repeat GO:0005515 TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 Pfam PF13855 Leucine rich repeat 367 424 1.5E-6 T 13-10-2018 IPR001611 Leucine-rich repeat GO:0005515 TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SMART SM00369 457 479 7.3 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SMART SM00369 388 411 39.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SMART SM00369 273 295 50.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SMART SM00369 342 365 34.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SMART SM00369 296 319 23.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SMART SM00369 480 503 9.4 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 SMART SM00369 229 252 130.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 Gene3D G3DSA:3.80.10.10 142 371 3.5E-43 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 Pfam PF01706 FliG C-terminal domain 3 88 1.3E-8 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal TREPR_1895 1e5ec44738f88fb3d1edaff1cbb35dc7 805 Gene3D G3DSA:1.10.220.30 2 90 2.0E-14 T 13-10-2018 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 Gene3D G3DSA:1.10.730.10 667 851 3.8E-55 T 13-10-2018 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1063 14.142 T 13-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 SUPERFAMILY SSF50677 201 415 7.43E-46 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 7 872 2.8E-299 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 Pfam PF08264 Anticodon-binding domain of tRNA 711 860 1.1E-32 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 Gene3D G3DSA:3.40.50.620 15 651 2.1E-240 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 3.9E-31 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 3.9E-31 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 413 428 3.9E-31 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 584 593 3.9E-31 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 41 52 3.9E-31 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 Gene3D G3DSA:3.90.740.10 198 419 2.1E-240 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 SUPERFAMILY SSF47323 681 919 9.72E-57 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 660 6.8E-200 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_2528 75dfad844eaf6decef1632e8c703c927 1076 SUPERFAMILY SSF52374 6 675 5.16E-138 T 13-10-2018 TREPR_0722 9c9f1f1becaab276a4b8613df200c769 273 Gene3D G3DSA:3.40.190.10 129 221 5.8E-49 T 13-10-2018 TREPR_0722 9c9f1f1becaab276a4b8613df200c769 273 SUPERFAMILY SSF53850 3 259 5.35E-46 T 13-10-2018 TREPR_0722 9c9f1f1becaab276a4b8613df200c769 273 SMART SM00062 39 263 2.8E-26 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0722 9c9f1f1becaab276a4b8613df200c769 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 258 8.9E-40 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0722 9c9f1f1becaab276a4b8613df200c769 273 Gene3D G3DSA:3.40.190.10 37 255 5.8E-49 T 13-10-2018 TREPR_1214 5c30011426994737b4f599e51680fc70 292 Gene3D G3DSA:3.30.70.120 202 276 3.4E-12 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TREPR_1214 5c30011426994737b4f599e51680fc70 292 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 230 283 1.2E-10 T 13-10-2018 IPR019264 Domain of unknown function DUF2179 TREPR_1214 5c30011426994737b4f599e51680fc70 292 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 15 224 7.9E-47 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT TREPR_1214 5c30011426994737b4f599e51680fc70 292 PIRSF PIRSF006483 4 291 7.0E-59 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT TREPR_2011 2791944179879d95c0b146db0305c1ae 108 Pfam PF12728 Helix-turn-helix domain 18 67 2.4E-9 T 13-10-2018 TREPR_2011 2791944179879d95c0b146db0305c1ae 108 SUPERFAMILY SSF46955 18 64 4.03E-5 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily TREPR_1459 29470026b6b411a3cc917bae9f8b96e4 601 SUPERFAMILY SSF55486 7 582 1.68E-102 T 13-10-2018 TREPR_1459 29470026b6b411a3cc917bae9f8b96e4 601 Pfam PF08439 Oligopeptidase F 117 185 2.2E-19 T 13-10-2018 IPR013647 Oligopeptidase F, N-terminal domain TREPR_1459 29470026b6b411a3cc917bae9f8b96e4 601 Pfam PF01432 Peptidase family M3 205 586 5.0E-65 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 TREPR_1459 29470026b6b411a3cc917bae9f8b96e4 601 Gene3D G3DSA:1.10.287.830 184 227 8.8E-6 T 13-10-2018 TREPR_1459 29470026b6b411a3cc917bae9f8b96e4 601 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 10 596 8.6E-194 T 13-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 TREPR_1459 29470026b6b411a3cc917bae9f8b96e4 601 Gene3D G3DSA:1.10.1370.20 229 601 8.4E-127 T 13-10-2018 TREPR_1459 29470026b6b411a3cc917bae9f8b96e4 601 Gene3D G3DSA:1.20.140.70 27 181 1.2E-34 T 13-10-2018 TREPR_3571 a2dec2a0744f60683afc57c628e143c7 330 SUPERFAMILY SSF51726 2 328 1.33E-35 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_3571 a2dec2a0744f60683afc57c628e143c7 330 Gene3D G3DSA:3.20.20.210 1 321 3.4E-45 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_3571 a2dec2a0744f60683afc57c628e143c7 330 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 50 312 1.2E-20 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_1712 aae9273e5c6b3e804cde84373dabc89d 571 SUPERFAMILY SSF52799 371 454 6.19E-18 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like TREPR_1712 aae9273e5c6b3e804cde84373dabc89d 571 SUPERFAMILY SSF52799 191 232 5.44E-5 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like TREPR_1712 aae9273e5c6b3e804cde84373dabc89d 571 Pfam PF13350 Tyrosine phosphatase family 189 454 1.8E-33 T 13-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type TREPR_1003 76cc78f238783fec2591861071ed63d6 225 Gene3D G3DSA:2.40.50.140 1 80 3.5E-5 T 13-10-2018 TREPR_1003 76cc78f238783fec2591861071ed63d6 225 SUPERFAMILY SSF57863 82 218 1.33E-9 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger TREPR_1003 76cc78f238783fec2591861071ed63d6 225 SUPERFAMILY SSF50249 2 77 2.91E-8 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1003 76cc78f238783fec2591861071ed63d6 225 Pfam PF02565 Recombination protein O C terminal 85 152 1.6E-5 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TREPR_1003 76cc78f238783fec2591861071ed63d6 225 Pfam PF11967 Recombination protein O N terminal 1 63 2.3E-8 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal TREPR_2427 118b38f08561f6630e681d3af33e13d5 351 Gene3D G3DSA:3.40.630.10 17 341 1.1E-100 T 13-10-2018 TREPR_2427 118b38f08561f6630e681d3af33e13d5 351 Pfam PF05343 M42 glutamyl aminopeptidase 52 338 2.8E-76 T 13-10-2018 IPR008007 Peptidase M42 TREPR_2427 118b38f08561f6630e681d3af33e13d5 351 Gene3D G3DSA:2.40.30.40 78 166 1.1E-100 T 13-10-2018 IPR023367 Peptidase M42, domain 2 TREPR_2427 118b38f08561f6630e681d3af33e13d5 351 PIRSF PIRSF001123 8 351 6.7E-87 T 13-10-2018 IPR008007 Peptidase M42 TREPR_2427 118b38f08561f6630e681d3af33e13d5 351 SUPERFAMILY SSF101821 78 182 8.09E-20 T 13-10-2018 TREPR_2427 118b38f08561f6630e681d3af33e13d5 351 SUPERFAMILY SSF53187 9 345 1.62E-53 T 13-10-2018 TREPR_3023 346656a39ede8588fe0b9bece958c942 332 Pfam PF00248 Aldo/keto reductase family 16 321 4.1E-68 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain TREPR_3023 346656a39ede8588fe0b9bece958c942 332 SUPERFAMILY SSF51430 3 321 2.1E-86 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_3023 346656a39ede8588fe0b9bece958c942 332 Gene3D G3DSA:3.20.20.100 1 329 7.9E-99 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 Pfam PF04542 Sigma-70 region 2 125 194 5.1E-18 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 Pfam PF04539 Sigma-70 region 3 208 279 8.4E-16 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 PRINTS PR00046 Major sigma-70 factor signature 297 309 9.6E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 PRINTS PR00046 Major sigma-70 factor signature 149 162 9.6E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 PRINTS PR00046 Major sigma-70 factor signature 333 344 9.6E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 PRINTS PR00046 Major sigma-70 factor signature 173 181 9.6E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 PRINTS PR00046 Major sigma-70 factor signature 318 333 9.6E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 Gene3D G3DSA:1.10.10.10 198 274 4.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 SUPERFAMILY SSF88659 198 272 5.67E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 Pfam PF00140 Sigma-70 factor, region 1.2 57 84 5.6E-7 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 SUPERFAMILY SSF88946 55 194 1.57E-43 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 Pfam PF04545 Sigma-70, region 4 294 345 5.0E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 SUPERFAMILY SSF88659 257 347 1.76E-21 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 124 346 7.3E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 Gene3D G3DSA:1.10.10.10 275 355 1.3E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2469 97ebe890c0748e24976c27e5d625f6cc 357 Gene3D G3DSA:1.10.601.10 49 194 2.4E-44 T 13-10-2018 TREPR_3692 35319b843a40250ef83df2e4020f2f13 672 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 525 549 8.8E-15 T 13-10-2018 TREPR_3692 35319b843a40250ef83df2e4020f2f13 672 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 488 500 8.8E-15 T 13-10-2018 TREPR_3692 35319b843a40250ef83df2e4020f2f13 672 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 344 360 8.8E-15 T 13-10-2018 TREPR_3692 35319b843a40250ef83df2e4020f2f13 672 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 368 382 8.8E-15 T 13-10-2018 TREPR_3692 35319b843a40250ef83df2e4020f2f13 672 Pfam PF02384 N-6 DNA Methylase 325 641 9.6E-30 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TREPR_3692 35319b843a40250ef83df2e4020f2f13 672 SUPERFAMILY SSF53335 199 637 5.03E-70 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3692 35319b843a40250ef83df2e4020f2f13 672 Gene3D G3DSA:3.40.50.150 321 657 1.8E-61 T 13-10-2018 TREPR_3692 35319b843a40250ef83df2e4020f2f13 672 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 54 161 4.0E-26 T 13-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Gene3D G3DSA:2.40.50.140 592 680 1.6E-23 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Gene3D G3DSA:2.40.50.140 332 421 4.7E-5 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Gene3D G3DSA:2.40.50.140 681 770 4.4E-23 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Gene3D G3DSA:3.40.50.300 1 215 4.5E-65 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SUPERFAMILY SSF50249 578 680 2.61E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2339 b295441662864e8e743eedd1fc80787b 798 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 245 759 1.0E-196 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Hamap MF_00238 Cytidylate kinase [cmk]. 1 212 26.454 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SUPERFAMILY SSF50249 500 602 1.0E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2339 b295441662864e8e743eedd1fc80787b 798 TIGRFAM TIGR00017 cmk: cytidylate kinase 2 207 1.2E-58 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Gene3D G3DSA:2.40.50.140 507 591 2.1E-27 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Gene3D G3DSA:2.40.50.140 423 505 1.6E-24 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SUPERFAMILY SSF50249 426 513 7.46E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SMART SM00316 511 583 1.0E-24 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SMART SM00316 258 321 2.2E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SMART SM00316 337 407 1.7 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SMART SM00316 598 670 1.5E-19 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SMART SM00316 426 496 2.3E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SMART SM00316 685 759 3.4E-23 T 13-10-2018 IPR022967 RNA-binding domain, S1 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 PRINTS PR00681 Ribosomal protein S1 signature 342 358 5.5E-46 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 PRINTS PR00681 Ribosomal protein S1 signature 526 545 5.5E-46 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 PRINTS PR00681 Ribosomal protein S1 signature 260 278 5.5E-46 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 PRINTS PR00681 Ribosomal protein S1 signature 278 292 5.5E-46 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 PRINTS PR00681 Ribosomal protein S1 signature 391 411 5.5E-46 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 PRINTS PR00681 Ribosomal protein S1 signature 448 469 5.5E-46 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 PRINTS PR00681 Ribosomal protein S1 signature 318 337 5.5E-46 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 PRINTS PR00681 Ribosomal protein S1 signature 566 584 5.5E-46 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SUPERFAMILY SSF52540 2 209 3.14E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SUPERFAMILY SSF50249 665 774 6.56E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SUPERFAMILY SSF50249 245 346 1.29E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Gene3D G3DSA:2.40.50.140 246 331 2.9E-14 T 13-10-2018 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Pfam PF02224 Cytidylate kinase 3 209 3.7E-65 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Pfam PF00575 S1 RNA binding domain 257 320 1.9E-5 T 13-10-2018 IPR003029 S1 domain GO:0003676 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Pfam PF00575 S1 RNA binding domain 426 496 1.3E-17 T 13-10-2018 IPR003029 S1 domain GO:0003676 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Pfam PF00575 S1 RNA binding domain 686 759 9.9E-17 T 13-10-2018 IPR003029 S1 domain GO:0003676 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Pfam PF00575 S1 RNA binding domain 511 583 1.2E-18 T 13-10-2018 IPR003029 S1 domain GO:0003676 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Pfam PF00575 S1 RNA binding domain 338 381 1.9E-4 T 13-10-2018 IPR003029 S1 domain GO:0003676 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 Pfam PF00575 S1 RNA binding domain 600 670 5.9E-13 T 13-10-2018 IPR003029 S1 domain GO:0003676 TREPR_2339 b295441662864e8e743eedd1fc80787b 798 SUPERFAMILY SSF50249 340 421 1.56E-8 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_0065 8369c5bd8e6fa06ab3227a89f1a026ef 125 SUPERFAMILY SSF69635 28 109 6.59E-12 T 13-10-2018 TREPR_0065 8369c5bd8e6fa06ab3227a89f1a026ef 125 Gene3D G3DSA:3.30.1460.10 15 113 2.5E-8 T 13-10-2018 TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 SMART SM00490 705 794 4.2E-15 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 SUPERFAMILY SSF52540 354 834 1.65E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 SMART SM00487 257 432 6.1E-16 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 Gene3D G3DSA:3.40.50.300 652 828 5.5E-28 T 13-10-2018 TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 Gene3D G3DSA:3.40.50.300 252 418 6.3E-15 T 13-10-2018 TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 Pfam PF13091 PLD-like domain 119 201 4.5E-9 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 SUPERFAMILY SSF52540 216 475 4.03E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 Pfam PF04851 Type III restriction enzyme, res subunit 262 331 4.6E-5 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 357 366 - T 13-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 Gene3D G3DSA:3.30.870.10 5 222 1.8E-13 T 13-10-2018 TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 Pfam PF00176 SNF2 family N-terminal domain 356 418 8.6E-6 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 TREPR_0410 df5c375f3a6fb748a389e305c0fa862b 1098 Pfam PF00271 Helicase conserved C-terminal domain 677 794 2.8E-14 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2402 945d3632ea57a97ac1bf50e0ac561fc1 907 Pfam PF02096 60Kd inner membrane protein 34 218 5.3E-21 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TREPR_2402 945d3632ea57a97ac1bf50e0ac561fc1 907 SUPERFAMILY SSF53649 491 785 1.87E-6 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TREPR_0316 c24929b8128e142a6034d5b5c88e54f3 95 Gene3D G3DSA:3.30.460.10 1 95 4.3E-14 T 13-10-2018 TREPR_0316 c24929b8128e142a6034d5b5c88e54f3 95 Pfam PF01909 Nucleotidyltransferase domain 11 79 1.7E-6 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TREPR_0316 c24929b8128e142a6034d5b5c88e54f3 95 SUPERFAMILY SSF81301 7 90 1.92E-10 T 13-10-2018 TREPR_0167 612fa5fdbfcde9c4b8414ff970b4763a 161 Gene3D G3DSA:2.30.110.10 3 139 8.1E-11 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TREPR_0167 612fa5fdbfcde9c4b8414ff970b4763a 161 SUPERFAMILY SSF50475 3 127 1.91E-6 T 13-10-2018 TREPR_3403 43250924734375754f5952bd53b3a83d 537 SUPERFAMILY SSF46689 480 529 1.39E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3403 43250924734375754f5952bd53b3a83d 537 SMART SM00342 444 527 1.4E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_3403 43250924734375754f5952bd53b3a83d 537 Pfam PF12833 Helix-turn-helix domain 451 528 8.3E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_3403 43250924734375754f5952bd53b3a83d 537 Pfam PF10114 Sensory domain found in PocR 123 236 2.2E-11 T 13-10-2018 IPR018771 PocR domain TREPR_3403 43250924734375754f5952bd53b3a83d 537 Gene3D G3DSA:1.10.10.60 478 529 3.8E-18 T 13-10-2018 TREPR_3403 43250924734375754f5952bd53b3a83d 537 Gene3D G3DSA:1.10.10.60 427 477 6.6E-16 T 13-10-2018 TREPR_3403 43250924734375754f5952bd53b3a83d 537 SUPERFAMILY SSF46689 428 478 1.92E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3403 43250924734375754f5952bd53b3a83d 537 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 511 527 2.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_3403 43250924734375754f5952bd53b3a83d 537 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 496 511 2.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_1576 8e30be62953c3d71548535815c1ed374 230 Pfam PF16258 Domain of unknown function (DUF4912) 77 185 2.9E-16 T 13-10-2018 IPR032585 Protein of unknown function DUF4912 TREPR_3662 c1ef8cabff665fb20c35cf73cc97074e 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 77 6.8E-16 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_3662 c1ef8cabff665fb20c35cf73cc97074e 341 Gene3D G3DSA:1.10.3720.10 107 341 1.1E-19 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3662 c1ef8cabff665fb20c35cf73cc97074e 341 SUPERFAMILY SSF161098 112 340 3.66E-24 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3662 c1ef8cabff665fb20c35cf73cc97074e 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 341 8.6E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0586 667cde3dc60dff210f3986b137892885 264 Gene3D G3DSA:2.60.40.420 66 160 9.2E-28 T 13-10-2018 IPR008972 Cupredoxin TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 SUPERFAMILY SSF54292 6 81 7.11E-17 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 7 83 2.9E-11 T 13-10-2018 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 SMART SM00929 90 130 4.3E-18 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 Gene3D G3DSA:3.10.20.740 5 129 5.4E-36 T 13-10-2018 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 Pfam PF00037 4Fe-4S binding domain 194 212 1.3E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 SUPERFAMILY SSF53920 196 574 3.14E-94 T 13-10-2018 IPR009016 Iron hydrogenase TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 SUPERFAMILY SSF54862 82 220 2.3E-34 T 13-10-2018 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 146 521 1.6E-123 T 13-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 Gene3D G3DSA:3.30.70.20 149 211 8.4E-129 T 13-10-2018 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 90 129 2.1E-16 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 34 51 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 Gene3D G3DSA:3.40.950.10 278 512 8.4E-129 T 13-10-2018 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 Gene3D G3DSA:3.40.50.1780 212 521 8.4E-129 T 13-10-2018 TREPR_3300 f884a5bd1e621a5103a2d3699ec05360 580 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 230 518 4.0E-81 T 13-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TREPR_0400 4537ae2c727c693e80ac6b7a78c98566 288 SUPERFAMILY SSF51658 5 285 2.21E-43 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily TREPR_0400 4537ae2c727c693e80ac6b7a78c98566 288 Gene3D G3DSA:3.20.20.150 1 286 3.1E-50 T 13-10-2018 TREPR_0400 4537ae2c727c693e80ac6b7a78c98566 288 Pfam PF01261 Xylose isomerase-like TIM barrel 29 193 3.1E-9 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TREPR_2720 e0dafde4dbddb035fd4645c9b90766d4 65 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 8 52 5.1E-9 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 TREPR_2720 e0dafde4dbddb035fd4645c9b90766d4 65 Pfam PF12728 Helix-turn-helix domain 8 52 6.9E-10 T 13-10-2018 TREPR_2720 e0dafde4dbddb035fd4645c9b90766d4 65 SUPERFAMILY SSF46955 8 51 8.06E-8 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily TREPR_2720 e0dafde4dbddb035fd4645c9b90766d4 65 Gene3D G3DSA:1.10.1660.10 4 56 1.9E-13 T 13-10-2018 TREPR_1912 2671059a231a047c6ed9e2e44a0a13e6 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 185 2.9E-8 T 13-10-2018 TREPR_1912 2671059a231a047c6ed9e2e44a0a13e6 209 SUPERFAMILY SSF56784 4 197 3.28E-28 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_1912 2671059a231a047c6ed9e2e44a0a13e6 209 Gene3D G3DSA:3.40.50.1000 8 185 1.4E-30 T 13-10-2018 IPR023214 HAD superfamily TREPR_1912 2671059a231a047c6ed9e2e44a0a13e6 209 Gene3D G3DSA:1.10.150.240 19 85 1.4E-30 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TREPR_1912 2671059a231a047c6ed9e2e44a0a13e6 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 185 7.2E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 211 1.1E-65 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 ProSitePatterns PS00632 Ribosomal protein S4 signature. 97 121 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 Gene3D G3DSA:3.10.290.10 98 194 1.1E-80 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 211 33.092 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 98 2.2E-25 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 Gene3D G3DSA:1.10.1050.10 6 211 1.1E-80 T 13-10-2018 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 SMART SM00363 99 163 7.5E-22 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 SUPERFAMILY SSF55174 2 211 2.25E-62 T 13-10-2018 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 Pfam PF01479 S4 domain 99 146 9.7E-22 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1500 deecdf7dde2d9af141e0b5b29efe4129 211 SMART SM01390 3 98 5.0E-42 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 414 1.6E-16 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 PIRSF PIRSF500136 1 421 3.2E-141 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 SMART SM00984 317 414 4.3E-23 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 SUPERFAMILY SSF51735 5 191 2.12E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 Gene3D G3DSA:3.40.50.720 1 198 5.7E-56 T 13-10-2018 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 409 1.7E-113 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 PIRSF PIRSF000124 4 418 9.6E-51 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 SUPERFAMILY SSF52413 299 413 1.2E-23 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 7.3E-23 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 180 2.7E-29 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 Gene3D G3DSA:3.40.50.720 201 420 2.0E-49 T 13-10-2018 TREPR_0345 056ba6602f8e49fa74b02f2d3623a960 421 SUPERFAMILY SSF48179 201 291 9.18E-24 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TREPR_0818 655baa805ed7729af051b0652c1a5659 209 Pfam PF01420 Type I restriction modification DNA specificity domain 10 176 2.0E-10 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TREPR_0818 655baa805ed7729af051b0652c1a5659 209 SUPERFAMILY SSF116734 9 177 3.6E-32 T 13-10-2018 TREPR_0818 655baa805ed7729af051b0652c1a5659 209 Gene3D G3DSA:3.90.220.20 3 183 2.1E-32 T 13-10-2018 TREPR_1966 3cc95ac2e6f7cd5b2491b18add556e8d 618 Gene3D G3DSA:3.20.20.70 206 536 2.5E-90 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1966 3cc95ac2e6f7cd5b2491b18add556e8d 618 Pfam PF02065 Melibiase 257 375 2.0E-16 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 TREPR_1966 3cc95ac2e6f7cd5b2491b18add556e8d 618 SUPERFAMILY SSF51445 213 541 1.28E-49 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_0799 4bdaeae8b1bf686c709438d197cef21a 191 SUPERFAMILY SSF143447 4 190 2.09E-52 T 13-10-2018 IPR036071 AMMECR1 domain superfamily TREPR_0799 4bdaeae8b1bf686c709438d197cef21a 191 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 50 191 7.1E-34 T 13-10-2018 IPR023473 AMMECR1 TREPR_0799 4bdaeae8b1bf686c709438d197cef21a 191 Gene3D G3DSA:3.30.700.20 11 190 1.5E-50 T 13-10-2018 IPR027485 AMMECR1, N-terminal TREPR_0799 4bdaeae8b1bf686c709438d197cef21a 191 Gene3D G3DSA:3.30.1490.150 120 188 1.5E-50 T 13-10-2018 TREPR_0799 4bdaeae8b1bf686c709438d197cef21a 191 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 13 188 2.5E-46 T 13-10-2018 IPR027623 AmmeMemoRadiSam system protein A TREPR_0799 4bdaeae8b1bf686c709438d197cef21a 191 Pfam PF01871 AMMECR1 17 187 1.1E-45 T 13-10-2018 IPR002733 AMMECR1 domain TREPR_3800 221d610401adddb90f9d205fdb08576e 142 TIGRFAM TIGR01753 flav_short: flavodoxin 4 141 8.5E-38 T 13-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 TREPR_3800 221d610401adddb90f9d205fdb08576e 142 Gene3D G3DSA:3.40.50.360 1 142 1.0E-35 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_3800 221d610401adddb90f9d205fdb08576e 142 Pfam PF00258 Flavodoxin 6 117 2.4E-9 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 TREPR_3800 221d610401adddb90f9d205fdb08576e 142 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 TREPR_3800 221d610401adddb90f9d205fdb08576e 142 SUPERFAMILY SSF52218 1 141 7.13E-31 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_0511 c03bf076331f59665bdd5d93483309bf 209 Pfam PF13353 4Fe-4S single cluster domain 57 192 7.2E-33 T 13-10-2018 TREPR_0511 c03bf076331f59665bdd5d93483309bf 209 Gene3D G3DSA:3.20.20.70 45 208 6.1E-34 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0511 c03bf076331f59665bdd5d93483309bf 209 ProSitePatterns PS01087 Radical activating enzymes signature. 59 80 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 TREPR_0511 c03bf076331f59665bdd5d93483309bf 209 Pfam PF04055 Radical SAM superfamily 66 160 9.8E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_0511 c03bf076331f59665bdd5d93483309bf 209 SUPERFAMILY SSF102114 58 151 1.29E-8 T 13-10-2018 TREPR_0511 c03bf076331f59665bdd5d93483309bf 209 PIRSF PIRSF000368 40 208 2.6E-46 T 13-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 SUPERFAMILY SSF63882 3 177 1.44E-51 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 Gene3D G3DSA:2.170.190.11 47 143 3.5E-94 T 13-10-2018 TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 SMART SM00852 182 320 4.0E-32 T 13-10-2018 IPR001453 MoaB/Mog domain TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 SUPERFAMILY SSF53218 179 325 1.83E-33 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 Pfam PF03453 MoeA N-terminal region (domain I and II) 4 169 5.6E-39 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 Gene3D G3DSA:3.40.980.10 177 319 3.5E-94 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 Gene3D G3DSA:2.40.340.10 326 406 3.4E-15 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 SUPERFAMILY SSF63867 330 406 5.23E-13 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 Gene3D G3DSA:3.90.105.10 25 176 3.5E-94 T 13-10-2018 TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 Pfam PF03454 MoeA C-terminal region (domain IV) 334 406 7.2E-11 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_3102 50ce8d2a3c15dba077bd0cbef613ff96 406 Pfam PF00994 Probable molybdopterin binding domain 183 319 1.2E-20 T 13-10-2018 IPR001453 MoaB/Mog domain TREPR_2819 3fcd6232c971f4bb58afc9b51a513341 271 SUPERFAMILY SSF52467 7 269 3.71E-71 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TREPR_2819 3fcd6232c971f4bb58afc9b51a513341 271 Pfam PF02146 Sir2 family 27 224 3.2E-44 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 TREPR_2819 3fcd6232c971f4bb58afc9b51a513341 271 Gene3D G3DSA:3.30.1600.10 36 194 8.5E-68 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily TREPR_2819 3fcd6232c971f4bb58afc9b51a513341 271 Gene3D G3DSA:3.40.50.1220 18 258 8.5E-68 T 13-10-2018 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 Gene3D G3DSA:3.30.1360.10 23 235 5.9E-75 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 34 238 2.2E-24 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 SUPERFAMILY SSF55257 14 243 1.86E-29 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 SUPERFAMILY SSF56553 57 188 1.06E-26 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 7 330 34.242 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 Gene3D G3DSA:1.10.150.20 236 350 5.6E-32 T 13-10-2018 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 258 322 4.6E-27 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 76 169 4.1E-13 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 SMART SM00662 27 244 3.2E-62 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 328 2.2E-109 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 Gene3D G3DSA:2.170.120.12 57 187 5.9E-75 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 SUPERFAMILY SSF47789 264 333 4.84E-25 T 13-10-2018 TREPR_1501 75df665a08aaf04acfe563f38a248be3 351 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 270 329 6.0E-16 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_2141 2e75ca493d18b32e19cb482c40c3e730 335 Gene3D G3DSA:3.40.190.10 118 218 1.8E-26 T 13-10-2018 TREPR_2141 2e75ca493d18b32e19cb482c40c3e730 335 SMART SM00062 39 257 0.0016 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_2141 2e75ca493d18b32e19cb482c40c3e730 335 SUPERFAMILY SSF53850 39 261 1.63E-25 T 13-10-2018 TREPR_2141 2e75ca493d18b32e19cb482c40c3e730 335 Pfam PF09084 NMT1/THI5 like 61 255 6.9E-13 T 13-10-2018 IPR015168 SsuA/THI5-like TREPR_2141 2e75ca493d18b32e19cb482c40c3e730 335 Gene3D G3DSA:3.40.190.10 49 315 1.8E-26 T 13-10-2018 TREPR_2179 79951dd0490f96170efed5da91c0fca2 273 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_2179 79951dd0490f96170efed5da91c0fca2 273 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 224 235 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_2179 79951dd0490f96170efed5da91c0fca2 273 SUPERFAMILY SSF54862 162 243 6.63E-17 T 13-10-2018 TREPR_2179 79951dd0490f96170efed5da91c0fca2 273 Gene3D G3DSA:3.30.70.20 183 247 5.8E-10 T 13-10-2018 TREPR_2179 79951dd0490f96170efed5da91c0fca2 273 Pfam PF13534 4Fe-4S dicluster domain 180 210 1.1E-4 T 13-10-2018 TREPR_2179 79951dd0490f96170efed5da91c0fca2 273 SUPERFAMILY SSF52218 1 132 3.28E-15 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_2179 79951dd0490f96170efed5da91c0fca2 273 Gene3D G3DSA:3.40.50.360 2 136 5.2E-14 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_2672 635f322c20fb3f52162510926f141255 184 SUPERFAMILY SSF55194 3 183 2.09E-71 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 TREPR_2672 635f322c20fb3f52162510926f141255 184 Gene3D G3DSA:3.30.1360.40 30 104 1.7E-69 T 13-10-2018 TREPR_2672 635f322c20fb3f52162510926f141255 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 2 184 28.18 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TREPR_2672 635f322c20fb3f52162510926f141255 184 Pfam PF01765 Ribosome recycling factor 19 182 5.3E-64 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 TREPR_2672 635f322c20fb3f52162510926f141255 184 Gene3D G3DSA:1.10.132.20 11 181 1.7E-69 T 13-10-2018 TREPR_2672 635f322c20fb3f52162510926f141255 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 9 184 4.2E-74 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TREPR_2505 070c18835d7db1e729ae50c6c0854a4c 308 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 6 303 4.3E-105 T 13-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 TREPR_2505 070c18835d7db1e729ae50c6c0854a4c 308 Hamap MF_01818 Ribonuclease BN [rbn]. 3 304 35.558 T 13-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 TREPR_2505 070c18835d7db1e729ae50c6c0854a4c 308 SUPERFAMILY SSF56281 6 304 6.66E-75 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2505 070c18835d7db1e729ae50c6c0854a4c 308 Pfam PF00753 Metallo-beta-lactamase superfamily 22 75 1.4E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2505 070c18835d7db1e729ae50c6c0854a4c 308 Gene3D G3DSA:3.60.15.10 3 304 5.2E-88 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2505 070c18835d7db1e729ae50c6c0854a4c 308 SMART SM00849 20 201 4.9E-4 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2505 070c18835d7db1e729ae50c6c0854a4c 308 Pfam PF12706 Beta-lactamase superfamily domain 196 270 1.0E-7 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_3663 79962cdd24fdfcd5a99ea1a1a8d23d16 370 SUPERFAMILY SSF52540 36 326 2.49E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3663 79962cdd24fdfcd5a99ea1a1a8d23d16 370 Pfam PF00005 ABC transporter 28 202 3.0E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3663 79962cdd24fdfcd5a99ea1a1a8d23d16 370 Gene3D G3DSA:3.40.50.300 4 369 6.7E-89 T 13-10-2018 TREPR_3663 79962cdd24fdfcd5a99ea1a1a8d23d16 370 SMART SM00382 35 252 1.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3663 79962cdd24fdfcd5a99ea1a1a8d23d16 370 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 252 324 4.3E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_3663 79962cdd24fdfcd5a99ea1a1a8d23d16 370 ProSitePatterns PS00211 ABC transporters family signature. 175 189 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3663 79962cdd24fdfcd5a99ea1a1a8d23d16 370 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 255 319 1.4E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_2707 578945190f410b6824960574ef881b98 150 Pfam PF01047 MarR family 35 93 9.3E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TREPR_2707 578945190f410b6824960574ef881b98 150 SUPERFAMILY SSF46785 6 141 1.14E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2707 578945190f410b6824960574ef881b98 150 SMART SM00347 27 128 5.0E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TREPR_2707 578945190f410b6824960574ef881b98 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 5.6E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TREPR_2707 578945190f410b6824960574ef881b98 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 5.6E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TREPR_2707 578945190f410b6824960574ef881b98 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 5.6E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TREPR_2707 578945190f410b6824960574ef881b98 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 5.6E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TREPR_2707 578945190f410b6824960574ef881b98 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 101 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site TREPR_2707 578945190f410b6824960574ef881b98 150 Gene3D G3DSA:1.10.10.10 1 142 2.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2285 e5282a044725ec0d5ae9e0bd547ab839 669 Pfam PF12476 Protein of unknown function (DUF3696) 609 651 1.3E-6 T 13-10-2018 IPR022532 Domain of unknown function DUF3696, C-terminal TREPR_2285 e5282a044725ec0d5ae9e0bd547ab839 669 SUPERFAMILY SSF52540 42 586 3.53E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2285 e5282a044725ec0d5ae9e0bd547ab839 669 Gene3D G3DSA:3.40.50.300 39 277 5.6E-9 T 13-10-2018 TREPR_2285 e5282a044725ec0d5ae9e0bd547ab839 669 Gene3D G3DSA:3.40.50.300 465 595 3.9E-5 T 13-10-2018 TREPR_2285 e5282a044725ec0d5ae9e0bd547ab839 669 Pfam PF13175 AAA ATPase domain 42 269 5.6E-11 T 13-10-2018 TREPR_2285 e5282a044725ec0d5ae9e0bd547ab839 669 Pfam PF13175 AAA ATPase domain 495 583 3.7E-17 T 13-10-2018 TREPR_3732 4c34e05c0cc033da8b9be5289172ca16 390 Gene3D G3DSA:3.40.50.2000 207 383 3.3E-36 T 13-10-2018 TREPR_3732 4c34e05c0cc033da8b9be5289172ca16 390 Pfam PF13439 Glycosyltransferase Family 4 77 198 6.8E-15 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TREPR_3732 4c34e05c0cc033da8b9be5289172ca16 390 Pfam PF00534 Glycosyl transferases group 1 206 362 2.3E-23 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_3732 4c34e05c0cc033da8b9be5289172ca16 390 SUPERFAMILY SSF53756 25 384 4.32E-66 T 13-10-2018 TREPR_3732 4c34e05c0cc033da8b9be5289172ca16 390 Gene3D G3DSA:3.40.50.2000 21 206 4.5E-15 T 13-10-2018 TREPR_2958 3f5472a34ff08954bbd20b4dda0e9715 264 SUPERFAMILY SSF54862 32 95 1.84E-16 T 13-10-2018 TREPR_2958 3f5472a34ff08954bbd20b4dda0e9715 264 Gene3D G3DSA:3.30.70.20 15 110 1.3E-11 T 13-10-2018 TREPR_2958 3f5472a34ff08954bbd20b4dda0e9715 264 Pfam PF00037 4Fe-4S binding domain 37 54 7.6E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_1654 b79c6fca9b580eab7e6af49aa22e5cb3 629 Gene3D G3DSA:3.40.50.12740 9 187 4.1E-27 T 13-10-2018 TREPR_1654 b79c6fca9b580eab7e6af49aa22e5cb3 629 SUPERFAMILY SSF55781 183 325 6.87E-5 T 13-10-2018 TREPR_1654 b79c6fca9b580eab7e6af49aa22e5cb3 629 Gene3D G3DSA:3.30.70.1230 349 547 6.1E-64 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_1654 b79c6fca9b580eab7e6af49aa22e5cb3 629 SUPERFAMILY SSF55073 357 541 3.14E-58 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_1654 b79c6fca9b580eab7e6af49aa22e5cb3 629 SUPERFAMILY SSF52172 6 131 2.28E-26 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1654 b79c6fca9b580eab7e6af49aa22e5cb3 629 Pfam PF00072 Response regulator receiver domain 12 124 1.3E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1654 b79c6fca9b580eab7e6af49aa22e5cb3 629 SMART SM00448 10 124 9.7E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1654 b79c6fca9b580eab7e6af49aa22e5cb3 629 SMART SM00044 324 522 3.7E-25 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_1654 b79c6fca9b580eab7e6af49aa22e5cb3 629 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 357 535 2.1E-38 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_3476 63b826d028008ce4fa0ca89deb62bd39 85 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 46 3.7E-12 T 13-10-2018 IPR022453 Zinc finger, MqsA-type TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 Gene3D G3DSA:1.10.287.950 455 715 7.1E-43 T 13-10-2018 TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 SMART SM00304 330 383 7.4E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 SMART SM00283 426 673 3.0E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 553 582 1.6E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 601 630 1.6E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 524 551 1.6E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 476 1.6E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 491 640 7.1E-28 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 SUPERFAMILY SSF58104 351 672 6.41E-48 T 13-10-2018 TREPR_0699 744d35fdd7094dfbcd155db8f706267f 716 Gene3D G3DSA:1.10.287.950 330 451 4.9E-9 T 13-10-2018 TREPR_0515 0f6bb72cf9fe2ee6fe502d7e22e3c564 319 SUPERFAMILY SSF53807 42 313 2.32E-41 T 13-10-2018 TREPR_0515 0f6bb72cf9fe2ee6fe502d7e22e3c564 319 Gene3D G3DSA:3.40.50.1980 42 169 1.3E-19 T 13-10-2018 TREPR_0515 0f6bb72cf9fe2ee6fe502d7e22e3c564 319 Gene3D G3DSA:3.40.50.1980 177 313 1.8E-17 T 13-10-2018 TREPR_0515 0f6bb72cf9fe2ee6fe502d7e22e3c564 319 Pfam PF01497 Periplasmic binding protein 57 291 2.7E-16 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain TREPR_1368 d72e393178e4a7c5a98db2315b623f40 237 Gene3D G3DSA:3.30.2350.10 14 235 5.1E-61 T 13-10-2018 TREPR_1368 d72e393178e4a7c5a98db2315b623f40 237 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 64 78 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1368 d72e393178e4a7c5a98db2315b623f40 237 Pfam PF00849 RNA pseudouridylate synthase 22 179 2.8E-29 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1368 d72e393178e4a7c5a98db2315b623f40 237 SUPERFAMILY SSF55120 10 233 4.32E-60 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_3228 18bbe39329756ccef30cf5a41bde6a42 396 Gene3D G3DSA:1.20.1250.20 2 190 1.9E-24 T 13-10-2018 TREPR_3228 18bbe39329756ccef30cf5a41bde6a42 396 SUPERFAMILY SSF103473 4 387 1.11E-46 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_3228 18bbe39329756ccef30cf5a41bde6a42 396 Gene3D G3DSA:1.20.1250.20 197 383 7.4E-28 T 13-10-2018 TREPR_3228 18bbe39329756ccef30cf5a41bde6a42 396 Pfam PF07690 Major Facilitator Superfamily 10 344 7.2E-28 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TREPR_3531 5db24ced6752ed96f9a4c6daba16d1b6 360 Gene3D G3DSA:3.40.50.2300 47 304 1.1E-99 T 13-10-2018 TREPR_3531 5db24ced6752ed96f9a4c6daba16d1b6 360 Gene3D G3DSA:3.40.50.2300 151 336 1.1E-99 T 13-10-2018 TREPR_3531 5db24ced6752ed96f9a4c6daba16d1b6 360 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 48 342 1.2E-74 T 13-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TREPR_3531 5db24ced6752ed96f9a4c6daba16d1b6 360 SUPERFAMILY SSF53822 42 259 2.62E-10 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0378 79a359e8a2c21f973655fc32ff6e8539 352 SUPERFAMILY SSF64182 47 330 1.05E-37 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily TREPR_0378 79a359e8a2c21f973655fc32ff6e8539 352 Pfam PF02272 DHHA1 domain 227 346 1.5E-9 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TREPR_0378 79a359e8a2c21f973655fc32ff6e8539 352 Pfam PF01368 DHH family 47 191 3.8E-9 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_0378 79a359e8a2c21f973655fc32ff6e8539 352 Gene3D G3DSA:3.90.1640.10 46 229 1.3E-29 T 13-10-2018 TREPR_2283 395d639e2570f1bccb0b0bd9390c9384 522 SUPERFAMILY SSF53335 14 520 9.13E-118 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2283 395d639e2570f1bccb0b0bd9390c9384 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 179 195 1.8E-13 T 13-10-2018 TREPR_2283 395d639e2570f1bccb0b0bd9390c9384 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 216 1.8E-13 T 13-10-2018 TREPR_2283 395d639e2570f1bccb0b0bd9390c9384 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 276 288 1.8E-13 T 13-10-2018 TREPR_2283 395d639e2570f1bccb0b0bd9390c9384 522 Gene3D G3DSA:3.40.50.150 156 465 1.4E-107 T 13-10-2018 TREPR_2283 395d639e2570f1bccb0b0bd9390c9384 522 Pfam PF12161 HsdM N-terminal domain 14 144 1.2E-18 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TREPR_2283 395d639e2570f1bccb0b0bd9390c9384 522 Gene3D G3DSA:1.20.1260.30 9 148 1.2E-24 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TREPR_2283 395d639e2570f1bccb0b0bd9390c9384 522 Pfam PF02384 N-6 DNA Methylase 155 476 5.3E-98 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TREPR_1796 2ceee931242336fdfc3fe1d7291c7fb9 372 SUPERFAMILY SSF55729 165 349 7.42E-39 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_1796 2ceee931242336fdfc3fe1d7291c7fb9 372 SUPERFAMILY SSF55729 23 174 1.43E-8 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_1796 2ceee931242336fdfc3fe1d7291c7fb9 372 Pfam PF02388 FemAB family 147 229 2.5E-21 T 13-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 TREPR_1796 2ceee931242336fdfc3fe1d7291c7fb9 372 Pfam PF02388 FemAB family 241 352 1.7E-27 T 13-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 TREPR_1796 2ceee931242336fdfc3fe1d7291c7fb9 372 Gene3D G3DSA:3.40.630.30 143 335 1.4E-64 T 13-10-2018 TREPR_2895 473fb2fca0b90a8053b9ed351a09d8ce 220 Pfam PF07796 Protein of unknown function (DUF1638) 31 193 4.5E-38 T 13-10-2018 IPR012437 Domain of unknown function DUF1638 TREPR_0190 959a1e12fd529559f7758e8c7770abfb 591 SUPERFAMILY SSF53649 250 556 8.29E-23 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TREPR_0190 959a1e12fd529559f7758e8c7770abfb 591 Gene3D G3DSA:3.40.720.10 242 545 1.9E-35 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TREPR_0190 959a1e12fd529559f7758e8c7770abfb 591 Pfam PF00884 Sulfatase 252 495 1.1E-14 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 TREPR_3567 a3b30bbad9f346082471112cf1af24b1 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.4E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TREPR_3567 a3b30bbad9f346082471112cf1af24b1 292 Gene3D G3DSA:1.10.10.10 1 91 9.9E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3567 a3b30bbad9f346082471112cf1af24b1 292 Gene3D G3DSA:3.40.190.290 92 292 7.1E-24 T 13-10-2018 TREPR_3567 a3b30bbad9f346082471112cf1af24b1 292 SUPERFAMILY SSF53850 91 290 1.57E-18 T 13-10-2018 TREPR_3567 a3b30bbad9f346082471112cf1af24b1 292 SUPERFAMILY SSF46785 1 87 1.16E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_3567 a3b30bbad9f346082471112cf1af24b1 292 Pfam PF03466 LysR substrate binding domain 90 289 2.7E-15 T 13-10-2018 IPR005119 LysR, substrate-binding TREPR_1700 6c284e956e15d2b3e603a688b903c585 228 Gene3D G3DSA:2.60.120.1460 17 225 1.1E-41 T 13-10-2018 TREPR_1700 6c284e956e15d2b3e603a688b903c585 228 SUPERFAMILY SSF46785 149 226 3.67E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1700 6c284e956e15d2b3e603a688b903c585 228 SUPERFAMILY SSF51206 7 141 2.62E-25 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like TREPR_1700 6c284e956e15d2b3e603a688b903c585 228 Pfam PF00027 Cyclic nucleotide-binding domain 31 117 1.8E-12 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_1700 6c284e956e15d2b3e603a688b903c585 228 Pfam PF13545 Crp-like helix-turn-helix domain 151 223 6.7E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TREPR_1700 6c284e956e15d2b3e603a688b903c585 228 SMART SM00100 12 129 2.2E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_1700 6c284e956e15d2b3e603a688b903c585 228 SMART SM00419 169 217 1.1E-8 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TREPR_1438 e0245fb7d27713896a838af2237e9551 2016 Gene3D G3DSA:2.60.40.10 39 135 1.8E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1438 e0245fb7d27713896a838af2237e9551 2016 ProSitePatterns PS00018 EF-hand calcium-binding domain. 197 209 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site TREPR_2563 359e07449c97f594e7b47491426b4fdb 190 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 18 189 40.884 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TREPR_2563 359e07449c97f594e7b47491426b4fdb 190 Gene3D G3DSA:3.60.20.10 15 190 5.0E-64 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_2563 359e07449c97f594e7b47491426b4fdb 190 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 19 189 5.8E-83 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TREPR_2563 359e07449c97f594e7b47491426b4fdb 190 SUPERFAMILY SSF56235 16 189 1.57E-57 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_2563 359e07449c97f594e7b47491426b4fdb 190 Pfam PF00227 Proteasome subunit 17 187 2.1E-25 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 TREPR_2563 359e07449c97f594e7b47491426b4fdb 190 PIRSF PIRSF039093 12 190 3.6E-86 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TREPR_1035 c49bc279dfc3f2b84f3737d7f41b4703 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 6.9E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1035 c49bc279dfc3f2b84f3737d7f41b4703 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 9.9E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1035 c49bc279dfc3f2b84f3737d7f41b4703 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 9.9E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1035 c49bc279dfc3f2b84f3737d7f41b4703 222 Gene3D G3DSA:1.10.357.10 8 181 1.2E-31 T 13-10-2018 TREPR_1035 c49bc279dfc3f2b84f3737d7f41b4703 222 SUPERFAMILY SSF46689 10 71 2.99E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3031 d9d0a4603bcea4bfc6064eb7665f6e63 326 Pfam PF00005 ABC transporter 34 186 5.5E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3031 d9d0a4603bcea4bfc6064eb7665f6e63 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 303 5.9E-13 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_3031 d9d0a4603bcea4bfc6064eb7665f6e63 326 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3031 d9d0a4603bcea4bfc6064eb7665f6e63 326 SMART SM00382 43 236 8.8E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3031 d9d0a4603bcea4bfc6064eb7665f6e63 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 323 2.5E-23 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_3031 d9d0a4603bcea4bfc6064eb7665f6e63 326 SUPERFAMILY SSF52540 7 258 1.2E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3031 d9d0a4603bcea4bfc6064eb7665f6e63 326 Gene3D G3DSA:3.40.50.300 6 326 3.0E-94 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 SUPERFAMILY SSF81665 268 800 3.79E-16 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 Gene3D G3DSA:3.30.70.100 3 71 4.7E-20 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 75 137 1.9E-11 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 67 9.1E-12 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 Pfam PF00403 Heavy-metal-associated domain 5 66 1.4E-15 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 Pfam PF00403 Heavy-metal-associated domain 75 136 3.5E-15 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 3.3E-30 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 637 3.3E-30 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 724 736 3.3E-30 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 658 3.3E-30 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 701 720 3.3E-30 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 351 365 3.3E-30 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 Pfam PF00122 E1-E2 ATPase 302 480 1.6E-56 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 SUPERFAMILY SSF56784 499 808 2.53E-65 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 SUPERFAMILY SSF55008 3 70 4.45E-20 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 Gene3D G3DSA:2.70.150.20 294 406 2.2E-42 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 234 810 5.1E-201 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00942 Copper-transporting ATPase 1 signature 161 182 4.0E-12 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00942 Copper-transporting ATPase 1 signature 3 28 4.0E-12 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00942 Copper-transporting ATPase 1 signature 96 117 4.0E-12 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 PRINTS PR00942 Copper-transporting ATPase 1 signature 217 242 4.0E-12 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 Gene3D G3DSA:3.40.50.1000 482 753 2.2E-101 T 13-10-2018 IPR023214 HAD superfamily TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 Gene3D G3DSA:3.30.70.100 72 140 4.7E-19 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 715 9.3E-48 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 SUPERFAMILY SSF55008 73 138 1.96E-18 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 216 811 3.2E-189 T 13-10-2018 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 SUPERFAMILY SSF81653 304 401 1.7E-30 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 273 794 4.1E-101 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TREPR_0584 8f7b38078c2a02de441278e68ddf1da0 818 Gene3D G3DSA:3.40.1110.10 512 633 2.2E-101 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TREPR_2005 e9a46e32cb545d0ee531ec17db5cf857 1465 Gene3D G3DSA:2.60.40.10 198 299 7.7E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_2396 e90ef71313473db34da67c8570c0d245 344 SUPERFAMILY SSF55060 194 340 1.79E-25 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TREPR_2396 e90ef71313473db34da67c8570c0d245 344 PRINTS PR00960 LmbP protein signature 148 167 1.7E-39 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 TREPR_2396 e90ef71313473db34da67c8570c0d245 344 PRINTS PR00960 LmbP protein signature 106 127 1.7E-39 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 TREPR_2396 e90ef71313473db34da67c8570c0d245 344 PRINTS PR00960 LmbP protein signature 257 281 1.7E-39 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 TREPR_2396 e90ef71313473db34da67c8570c0d245 344 PRINTS PR00960 LmbP protein signature 285 304 1.7E-39 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 TREPR_2396 e90ef71313473db34da67c8570c0d245 344 PRINTS PR00960 LmbP protein signature 7 22 1.7E-39 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 TREPR_2396 e90ef71313473db34da67c8570c0d245 344 Pfam PF00288 GHMP kinases N terminal domain 102 168 5.9E-13 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TREPR_2396 e90ef71313473db34da67c8570c0d245 344 PIRSF PIRSF036406 1 344 2.2E-138 T 13-10-2018 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 TREPR_2396 e90ef71313473db34da67c8570c0d245 344 SUPERFAMILY SSF54211 2 187 2.43E-36 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2396 e90ef71313473db34da67c8570c0d245 344 Gene3D G3DSA:3.30.230.120 1 344 1.6E-117 T 13-10-2018 TREPR_2396 e90ef71313473db34da67c8570c0d245 344 Pfam PF08544 GHMP kinases C terminal 242 303 8.1E-5 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain TREPR_2433 04c79525c0e17c93afeb64b8e954c84a 515 PIRSF PIRSF002741 1 514 9.8E-101 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_2433 04c79525c0e17c93afeb64b8e954c84a 515 Gene3D G3DSA:3.10.105.10 278 491 6.8E-120 T 13-10-2018 TREPR_2433 04c79525c0e17c93afeb64b8e954c84a 515 SUPERFAMILY SSF53850 29 512 1.09E-119 T 13-10-2018 TREPR_2433 04c79525c0e17c93afeb64b8e954c84a 515 Gene3D G3DSA:3.40.190.10 197 500 6.8E-120 T 13-10-2018 TREPR_2433 04c79525c0e17c93afeb64b8e954c84a 515 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 426 7.2E-87 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_2433 04c79525c0e17c93afeb64b8e954c84a 515 Gene3D G3DSA:3.90.76.10 60 196 6.8E-120 T 13-10-2018 TREPR_3166 0ef5068f3704a44e9f34a70557c3fb93 236 Gene3D G3DSA:3.40.50.1580 1 236 8.0E-63 T 13-10-2018 TREPR_3166 0ef5068f3704a44e9f34a70557c3fb93 236 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 1 236 40.348 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TREPR_3166 0ef5068f3704a44e9f34a70557c3fb93 236 Pfam PF01048 Phosphorylase superfamily 2 234 4.4E-43 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TREPR_3166 0ef5068f3704a44e9f34a70557c3fb93 236 SUPERFAMILY SSF53167 2 232 6.68E-63 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TREPR_3166 0ef5068f3704a44e9f34a70557c3fb93 236 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 234 3.9E-76 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 TREPR_3273 4bc578b722fc6150ba3e6ed6349bf52d 360 Gene3D G3DSA:3.40.50.1980 27 166 8.6E-33 T 13-10-2018 TREPR_3273 4bc578b722fc6150ba3e6ed6349bf52d 360 SUPERFAMILY SSF53807 33 321 2.35E-41 T 13-10-2018 TREPR_3273 4bc578b722fc6150ba3e6ed6349bf52d 360 Pfam PF01497 Periplasmic binding protein 104 290 1.1E-16 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain TREPR_3273 4bc578b722fc6150ba3e6ed6349bf52d 360 Gene3D G3DSA:3.40.50.1980 168 360 2.8E-63 T 13-10-2018 TREPR_3210 91aa59645f91b5ed186809abe58d6074 284 Gene3D G3DSA:3.30.70.120 212 284 5.1E-19 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TREPR_3210 91aa59645f91b5ed186809abe58d6074 284 Pfam PF08029 HisG, C-terminal domain 210 281 1.5E-21 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 TREPR_3210 91aa59645f91b5ed186809abe58d6074 284 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 186 283 2.4E-27 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 TREPR_3210 91aa59645f91b5ed186809abe58d6074 284 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 182 1.1E-41 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 TREPR_3210 91aa59645f91b5ed186809abe58d6074 284 Pfam PF01634 ATP phosphoribosyltransferase 50 201 1.4E-35 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 TREPR_3210 91aa59645f91b5ed186809abe58d6074 284 SUPERFAMILY SSF53850 3 208 4.34E-46 T 13-10-2018 TREPR_3210 91aa59645f91b5ed186809abe58d6074 284 SUPERFAMILY SSF54913 212 283 1.45E-17 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TREPR_3210 91aa59645f91b5ed186809abe58d6074 284 Gene3D G3DSA:3.40.190.10 5 198 1.2E-49 T 13-10-2018 TREPR_3210 91aa59645f91b5ed186809abe58d6074 284 Gene3D G3DSA:3.40.190.10 89 176 1.2E-49 T 13-10-2018 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 Gene3D G3DSA:3.30.565.10 540 707 2.6E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 Pfam PF07695 7TM diverse intracellular signalling 218 435 2.5E-10 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 Gene3D G3DSA:1.10.287.130 438 539 3.9E-26 T 13-10-2018 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 681 7.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 PRINTS PR00344 Bacterial sensor protein C-terminal signature 687 700 7.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 642 7.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 SUPERFAMILY SSF52172 845 985 1.04E-29 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 Pfam PF00072 Response regulator receiver domain 849 974 9.7E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 SMART SM00388 476 541 1.6E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 Pfam PF01627 Hpt domain 1028 1107 7.1E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 588 701 6.7E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 SMART SM00448 846 977 8.2E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 SUPERFAMILY SSF47384 464 542 4.32E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 Gene3D G3DSA:1.20.120.160 1009 1113 5.1E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 Pfam PF00512 His Kinase A (phospho-acceptor) domain 477 541 1.3E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 SMART SM00387 588 703 6.1E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 SUPERFAMILY SSF47226 960 1098 7.2E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 Gene3D G3DSA:3.40.50.2300 841 981 3.1E-38 T 13-10-2018 TREPR_1985 cc50912f20bc3bd68211e6ad5294560e 1198 SUPERFAMILY SSF55874 530 702 4.71E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1257 c3beead61c285ff758cbc482a6560843 443 Pfam PF00072 Response regulator receiver domain 9 119 1.8E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1257 c3beead61c285ff758cbc482a6560843 443 SMART SM00044 131 355 8.7E-18 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_1257 c3beead61c285ff758cbc482a6560843 443 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 181 355 6.7E-32 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_1257 c3beead61c285ff758cbc482a6560843 443 SUPERFAMILY SSF52172 9 153 4.98E-34 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1257 c3beead61c285ff758cbc482a6560843 443 SUPERFAMILY SSF55073 177 366 2.35E-54 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_1257 c3beead61c285ff758cbc482a6560843 443 Gene3D G3DSA:3.40.50.2300 8 156 5.2E-35 T 13-10-2018 TREPR_1257 c3beead61c285ff758cbc482a6560843 443 SMART SM00448 6 118 1.9E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1257 c3beead61c285ff758cbc482a6560843 443 Gene3D G3DSA:3.30.70.1230 171 380 4.2E-65 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_1370 16536debe50f7932bb4add8a0eedd917 178 SUPERFAMILY SSF89028 1 172 6.67E-42 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TREPR_1370 16536debe50f7932bb4add8a0eedd917 178 Gene3D G3DSA:1.20.1200.10 12 178 1.1E-46 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TREPR_1370 16536debe50f7932bb4add8a0eedd917 178 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 5 172 1.4E-42 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TREPR_1370 16536debe50f7932bb4add8a0eedd917 178 Pfam PF01923 Cobalamin adenosyltransferase 3 171 3.2E-48 T 13-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TREPR_1370 16536debe50f7932bb4add8a0eedd917 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 170 4.0E-25 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TREPR_2779 9b506b74049505127e776be8bb125ab0 286 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 224 235 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_2779 9b506b74049505127e776be8bb125ab0 286 Gene3D G3DSA:3.30.70.20 206 258 1.9E-6 T 13-10-2018 TREPR_2779 9b506b74049505127e776be8bb125ab0 286 Pfam PF00037 4Fe-4S binding domain 221 240 3.4E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_2779 9b506b74049505127e776be8bb125ab0 286 SUPERFAMILY SSF54862 220 273 2.51E-7 T 13-10-2018 TREPR_1217 6467cf11fa7ed49309d01aa59f34b485 133 Gene3D G3DSA:3.40.50.360 16 133 3.6E-5 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_2453 2d5771162f5186b2e937001424450361 420 Gene3D G3DSA:3.40.50.1260 194 410 5.9E-154 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PIRSF PIRSF000724 1 419 4.3E-145 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 14 24 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 Gene3D G3DSA:3.40.50.1260 6 417 5.9E-154 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 SUPERFAMILY SSF53748 2 417 3.89E-151 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 Pfam PF00162 Phosphoglycerate kinase 5 410 2.8E-150 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 420 40.972 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PRINTS PR00477 Phosphoglycerate kinase family signature 215 234 2.3E-95 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 2.3E-95 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PRINTS PR00477 Phosphoglycerate kinase family signature 337 362 2.3E-95 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PRINTS PR00477 Phosphoglycerate kinase family signature 129 144 2.3E-95 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PRINTS PR00477 Phosphoglycerate kinase family signature 373 384 2.3E-95 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 2.3E-95 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PRINTS PR00477 Phosphoglycerate kinase family signature 161 183 2.3E-95 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PRINTS PR00477 Phosphoglycerate kinase family signature 396 413 2.3E-95 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2453 2d5771162f5186b2e937001424450361 420 PRINTS PR00477 Phosphoglycerate kinase family signature 192 214 2.3E-95 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_1131 195b7119cd50ba0f78796c71913cc049 237 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 179 2.8E-5 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TREPR_1131 195b7119cd50ba0f78796c71913cc049 237 PRINTS PR01374 Gram-negative bacterial tonB protein signature 179 197 2.8E-5 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TREPR_1131 195b7119cd50ba0f78796c71913cc049 237 PRINTS PR01374 Gram-negative bacterial tonB protein signature 59 69 2.8E-5 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TREPR_1131 195b7119cd50ba0f78796c71913cc049 237 Gene3D G3DSA:3.30.1150.10 101 237 2.3E-26 T 13-10-2018 TREPR_1131 195b7119cd50ba0f78796c71913cc049 237 SUPERFAMILY SSF74653 139 236 7.98E-21 T 13-10-2018 TREPR_1131 195b7119cd50ba0f78796c71913cc049 237 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 164 236 3.3E-17 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 TREPR_1131 195b7119cd50ba0f78796c71913cc049 237 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 166 236 3.1E-18 T 13-10-2018 IPR006260 TonB/TolA, C-terminal TREPR_2827 8dd2897dfb1d9b87a9cbb51947c3ee95 264 Pfam PF17131 Outer membrane lipoprotein-sorting protein 75 260 3.1E-63 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TREPR_2827 8dd2897dfb1d9b87a9cbb51947c3ee95 264 Gene3D G3DSA:2.50.20.10 26 260 5.1E-71 T 13-10-2018 TREPR_1981 b2d298c67631b1d2ce9f3f668ade1f3a 593 SUPERFAMILY SSF161098 32 292 5.63E-52 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1981 b2d298c67631b1d2ce9f3f668ade1f3a 593 SUPERFAMILY SSF161098 315 558 2.75E-40 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1981 b2d298c67631b1d2ce9f3f668ade1f3a 593 Gene3D G3DSA:1.10.3720.10 31 297 7.0E-63 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1981 b2d298c67631b1d2ce9f3f668ade1f3a 593 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 288 1.7E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1981 b2d298c67631b1d2ce9f3f668ade1f3a 593 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 380 568 7.5E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1981 b2d298c67631b1d2ce9f3f668ade1f3a 593 Gene3D G3DSA:1.10.3720.10 313 562 8.5E-42 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3768 434769d5ac595589db7e080be11fff18 432 Pfam PF13432 Tetratricopeptide repeat 362 420 4.8E-9 T 13-10-2018 TREPR_3768 434769d5ac595589db7e080be11fff18 432 SUPERFAMILY SSF48452 117 422 1.54E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3768 434769d5ac595589db7e080be11fff18 432 Gene3D G3DSA:1.25.40.10 261 431 4.9E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3768 434769d5ac595589db7e080be11fff18 432 SMART SM00028 352 385 0.034 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3768 434769d5ac595589db7e080be11fff18 432 SMART SM00028 386 419 0.021 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3768 434769d5ac595589db7e080be11fff18 432 SMART SM00028 318 351 8.3 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3768 434769d5ac595589db7e080be11fff18 432 SMART SM00028 211 244 21.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3768 434769d5ac595589db7e080be11fff18 432 Gene3D G3DSA:1.25.40.10 115 251 5.7E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2516 4d8008fc8e9593c04947dfc4bd44365e 326 TIGRFAM TIGR01932 hflC: HflC protein 8 321 1.4E-90 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TREPR_2516 4d8008fc8e9593c04947dfc4bd44365e 326 SMART SM00244 22 223 9.0E-23 T 13-10-2018 IPR001107 Band 7 domain TREPR_2516 4d8008fc8e9593c04947dfc4bd44365e 326 Gene3D G3DSA:3.30.479.30 51 155 5.5E-10 T 13-10-2018 TREPR_2516 4d8008fc8e9593c04947dfc4bd44365e 326 PIRSF PIRSF005651 1 326 2.0E-94 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TREPR_2516 4d8008fc8e9593c04947dfc4bd44365e 326 Pfam PF01145 SPFH domain / Band 7 family 26 233 7.4E-24 T 13-10-2018 IPR001107 Band 7 domain TREPR_2516 4d8008fc8e9593c04947dfc4bd44365e 326 SUPERFAMILY SSF117892 173 228 1.44E-7 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily TREPR_2516 4d8008fc8e9593c04947dfc4bd44365e 326 SUPERFAMILY SSF117892 55 145 4.58E-12 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily TREPR_0225 75762f3b3fb63473686fdf94abca22b6 210 Gene3D G3DSA:3.20.80.10 2 208 9.6E-78 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TREPR_0225 75762f3b3fb63473686fdf94abca22b6 210 SUPERFAMILY SSF55136 127 209 1.52E-6 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily TREPR_0225 75762f3b3fb63473686fdf94abca22b6 210 Pfam PF06445 GyrI-like small molecule binding domain 20 208 2.8E-29 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain TREPR_0225 75762f3b3fb63473686fdf94abca22b6 210 PIRSF PIRSF031644 2 210 5.3E-75 T 13-10-2018 IPR008319 Uncharacterised conserved protein UCP031644 TREPR_2549 80944010a671ce3fafb77ff9130e8f25 257 SUPERFAMILY SSF89392 44 192 2.71E-7 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TREPR_2549 80944010a671ce3fafb77ff9130e8f25 257 Pfam PF17131 Outer membrane lipoprotein-sorting protein 75 253 3.5E-34 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TREPR_2549 80944010a671ce3fafb77ff9130e8f25 257 Gene3D G3DSA:2.50.20.10 23 255 2.3E-39 T 13-10-2018 TREPR_3051 f2ead7bf96e4cde3f8b976e01baf2592 232 Pfam PF13500 AAA domain 10 220 6.3E-36 T 13-10-2018 TREPR_3051 f2ead7bf96e4cde3f8b976e01baf2592 232 SUPERFAMILY SSF52540 9 218 4.13E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3051 f2ead7bf96e4cde3f8b976e01baf2592 232 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 8 219 24.373 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 TREPR_3051 f2ead7bf96e4cde3f8b976e01baf2592 232 PIRSF PIRSF006755 7 228 2.0E-50 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 TREPR_3051 f2ead7bf96e4cde3f8b976e01baf2592 232 Gene3D G3DSA:3.40.50.300 8 226 3.5E-53 T 13-10-2018 TREPR_3051 f2ead7bf96e4cde3f8b976e01baf2592 232 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 12 186 5.5E-38 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 TREPR_3843 6ea6d7fb4125736c2e1a0e93242cd30d 283 Gene3D G3DSA:1.10.3720.10 8 269 2.5E-56 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3843 6ea6d7fb4125736c2e1a0e93242cd30d 283 SUPERFAMILY SSF161098 17 283 2.8E-61 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3843 6ea6d7fb4125736c2e1a0e93242cd30d 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 267 1.2E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 865 892 1100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 1067 1087 1200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 1147 1168 700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 838 859 300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 598 623 1400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 1178 1198 5300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 280 312 6500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 720 741 6200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 487 509 400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 566 593 7200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 1093 1114 730.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 1205 1232 4400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SMART SM00710 1120 1141 14.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SUPERFAMILY SSF51126 383 654 3.23E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_2436 6d4ae36dcebbb9e750030c4aa403dcb7 1253 SUPERFAMILY SSF51126 936 1220 1.26E-8 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_0532 20acdb4da3bb160e9d6be5badf9716d9 360 SUPERFAMILY SSF81345 10 353 3.66E-74 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_0532 20acdb4da3bb160e9d6be5badf9716d9 360 Gene3D G3DSA:1.10.3470.10 13 358 5.6E-98 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_0532 20acdb4da3bb160e9d6be5badf9716d9 360 Pfam PF01032 FecCD transport family 28 353 9.7E-83 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TREPR_2391 ad5fbcd078bfd79aa2d0db747e8aa1b4 355 Pfam PF00535 Glycosyl transferase family 2 5 130 4.6E-32 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_2391 ad5fbcd078bfd79aa2d0db747e8aa1b4 355 SUPERFAMILY SSF53448 3 216 9.19E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2391 ad5fbcd078bfd79aa2d0db747e8aa1b4 355 Gene3D G3DSA:3.90.550.10 1 246 6.2E-45 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3807 3a9b69324080eb4a9dd7e42c88645ce3 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 217 9.8E-56 T 13-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 TREPR_3807 3a9b69324080eb4a9dd7e42c88645ce3 218 Pfam PF03006 Haemolysin-III related 11 212 1.9E-32 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 TREPR_0962 44be36995b1c220d0e78bd1e71013d5d 240 Gene3D G3DSA:3.40.50.300 1 240 1.2E-78 T 13-10-2018 TREPR_0962 44be36995b1c220d0e78bd1e71013d5d 240 SMART SM00382 26 212 2.3E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0962 44be36995b1c220d0e78bd1e71013d5d 240 PIRSF PIRSF039085 1 240 1.8E-104 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TREPR_0962 44be36995b1c220d0e78bd1e71013d5d 240 SUPERFAMILY SSF52540 1 234 5.06E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0962 44be36995b1c220d0e78bd1e71013d5d 240 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0962 44be36995b1c220d0e78bd1e71013d5d 240 Pfam PF00005 ABC transporter 17 164 9.3E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0241 d50fd8189bb2010f57aba26315d518ec 1294 SMART SM00642 322 717 7.6E-5 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TREPR_0241 d50fd8189bb2010f57aba26315d518ec 1294 SUPERFAMILY SSF51445 336 800 2.39E-54 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_0241 d50fd8189bb2010f57aba26315d518ec 1294 Pfam PF00128 Alpha amylase, catalytic domain 348 706 2.0E-9 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TREPR_3485 0d325c89a9cb1eda06c427ffb3bf6c6c 312 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 24 296 1.7E-64 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TREPR_3485 0d325c89a9cb1eda06c427ffb3bf6c6c 312 Gene3D G3DSA:1.10.8.100 216 300 6.0E-13 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 TREPR_3485 0d325c89a9cb1eda06c427ffb3bf6c6c 312 SMART SM00650 38 211 1.0E-50 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 TREPR_3485 0d325c89a9cb1eda06c427ffb3bf6c6c 312 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 54 81 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 TREPR_3485 0d325c89a9cb1eda06c427ffb3bf6c6c 312 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 22 298 41.753 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TREPR_3485 0d325c89a9cb1eda06c427ffb3bf6c6c 312 Gene3D G3DSA:3.40.50.150 3 213 3.7E-53 T 13-10-2018 TREPR_3485 0d325c89a9cb1eda06c427ffb3bf6c6c 312 Pfam PF00398 Ribosomal RNA adenine dimethylase 24 245 2.5E-39 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TREPR_3485 0d325c89a9cb1eda06c427ffb3bf6c6c 312 SUPERFAMILY SSF53335 19 299 3.68E-55 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0945 85f192f66079ecd5dc383a9a904158d7 92 SUPERFAMILY SSF53098 1 75 6.2E-15 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_0945 85f192f66079ecd5dc383a9a904158d7 92 Pfam PF00929 Exonuclease 12 64 1.3E-4 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TREPR_0945 85f192f66079ecd5dc383a9a904158d7 92 Gene3D G3DSA:3.30.420.10 1 74 3.9E-11 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_0385 9c2375d52d9223181c35649e9d02be6a 297 SUPERFAMILY SSF51366 69 283 1.13E-73 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TREPR_0385 9c2375d52d9223181c35649e9d02be6a 297 Pfam PF00218 Indole-3-glycerol phosphate synthase 62 282 2.4E-79 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 TREPR_0385 9c2375d52d9223181c35649e9d02be6a 297 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 284 32.215 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 TREPR_0385 9c2375d52d9223181c35649e9d02be6a 297 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 77 95 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 TREPR_0385 9c2375d52d9223181c35649e9d02be6a 297 Gene3D G3DSA:3.20.20.70 1 288 2.8E-91 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1468 c10f84cb00d9a81df714b1863bddd927 413 Gene3D G3DSA:3.40.50.300 10 280 3.7E-74 T 13-10-2018 TREPR_1468 c10f84cb00d9a81df714b1863bddd927 413 Pfam PF00005 ABC transporter 28 170 8.2E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1468 c10f84cb00d9a81df714b1863bddd927 413 SMART SM00382 37 220 6.4E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1468 c10f84cb00d9a81df714b1863bddd927 413 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1468 c10f84cb00d9a81df714b1863bddd927 413 SUPERFAMILY SSF52540 12 250 6.31E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1468 c10f84cb00d9a81df714b1863bddd927 413 SUPERFAMILY SSF50331 275 385 2.89E-6 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_1468 c10f84cb00d9a81df714b1863bddd927 413 Pfam PF08402 TOBE domain 313 385 1.1E-5 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TREPR_2886 cd5b0da1e26a19f2fb0d2e8052cef71c 458 Gene3D G3DSA:3.40.50.1980 165 431 1.3E-151 T 13-10-2018 TREPR_2886 cd5b0da1e26a19f2fb0d2e8052cef71c 458 SUPERFAMILY SSF53807 5 457 5.56E-135 T 13-10-2018 TREPR_2886 cd5b0da1e26a19f2fb0d2e8052cef71c 458 Gene3D G3DSA:3.40.50.1980 13 424 1.3E-151 T 13-10-2018 TREPR_2886 cd5b0da1e26a19f2fb0d2e8052cef71c 458 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 12 451 8.8E-132 T 13-10-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 TREPR_2886 cd5b0da1e26a19f2fb0d2e8052cef71c 458 Gene3D G3DSA:3.40.50.1980 24 164 1.3E-151 T 13-10-2018 TREPR_2886 cd5b0da1e26a19f2fb0d2e8052cef71c 458 Gene3D G3DSA:1.20.89.10 270 448 1.3E-151 T 13-10-2018 TREPR_2886 cd5b0da1e26a19f2fb0d2e8052cef71c 458 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 24 440 7.5E-112 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_2886 cd5b0da1e26a19f2fb0d2e8052cef71c 458 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 42 49 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 TREPR_2027 b23b6b2769a96b736c7e6992ed9eb1ed 267 Gene3D G3DSA:3.20.20.410 1 260 3.4E-87 T 13-10-2018 IPR036520 UPF0759 superfamily TREPR_2027 b23b6b2769a96b736c7e6992ed9eb1ed 267 Pfam PF01904 Protein of unknown function DUF72 21 255 1.2E-58 T 13-10-2018 IPR002763 Protein of unknown function DUF72 TREPR_2027 b23b6b2769a96b736c7e6992ed9eb1ed 267 SUPERFAMILY SSF117396 3 258 6.54E-71 T 13-10-2018 IPR036520 UPF0759 superfamily TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 Pfam PF00815 Histidinol dehydrogenase 22 445 1.4E-132 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 Gene3D G3DSA:3.20.20.70 487 655 9.2E-12 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 SUPERFAMILY SSF102114 490 647 7.32E-11 T 13-10-2018 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 446 35.079 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 29 445 6.0E-128 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 Gene3D G3DSA:3.40.50.1980 19 241 4.0E-70 T 13-10-2018 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 SUPERFAMILY SSF53720 25 446 7.19E-61 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 Gene3D G3DSA:3.40.50.1980 253 390 1.1E-39 T 13-10-2018 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 PRINTS PR00083 Histidinol dehydrogenase signature 200 225 2.0E-49 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 2.0E-49 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 PRINTS PR00083 Histidinol dehydrogenase signature 135 161 2.0E-49 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 PRINTS PR00083 Histidinol dehydrogenase signature 29 53 2.0E-49 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TREPR_3204 dda9c29f04a2533463a4195a5ce3a877 722 PRINTS PR00083 Histidinol dehydrogenase signature 170 196 2.0E-49 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TREPR_0723 d025436506199a81cc19c4e32cc5adab 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 120 5.6E-28 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TREPR_0723 d025436506199a81cc19c4e32cc5adab 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 226 2.7E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0723 d025436506199a81cc19c4e32cc5adab 229 SUPERFAMILY SSF161098 16 211 6.67E-51 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0723 d025436506199a81cc19c4e32cc5adab 229 Gene3D G3DSA:1.10.3720.10 2 228 9.0E-67 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Gene3D G3DSA:1.20.1270.90 155 239 1.0E-5 T 13-10-2018 TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Gene3D G3DSA:1.20.1270.90 434 518 2.7E-10 T 13-10-2018 TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Gene3D G3DSA:1.20.1270.90 248 333 1.2E-8 T 13-10-2018 TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Gene3D G3DSA:1.20.1270.90 341 425 1.4E-11 T 13-10-2018 TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Pfam PF07554 FIVAR domain 377 419 0.011 T 13-10-2018 TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Pfam PF07554 FIVAR domain 191 234 4.9E-4 T 13-10-2018 TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Pfam PF07554 FIVAR domain 636 670 0.078 T 13-10-2018 TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Pfam PF07554 FIVAR domain 284 327 0.0014 T 13-10-2018 TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 529 594 2.1E-14 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Gene3D G3DSA:2.60.40.3630 58 151 1.9E-6 T 13-10-2018 TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 1116 1137 1900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 1029 1050 2400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 1083 1104 1100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 995 1016 2000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 969 990 1400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 1202 1223 620.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 1255 1276 1100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 1142 1162 2200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 1174 1194 390.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 1230 1250 610.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 942 964 12.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 SMART SM00710 1056 1076 1600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3587 67eff44bfc3058945807c6b959d5ab92 1348 Gene3D G3DSA:3.10.20.660 526 597 4.9E-16 T 13-10-2018 TREPR_0332 635525b0fcfb0eb547d5d7020c4232a4 360 Pfam PF01757 Acyltransferase family 18 339 6.1E-15 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 SMART SM01240 4 464 7.4E-255 T 13-10-2018 TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 5 477 73.404 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 288 300 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 PIRSF PIRSF000130 1 478 1.0E-186 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 SUPERFAMILY SSF54631 91 198 2.65E-24 T 13-10-2018 TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 SUPERFAMILY SSF51412 3 468 1.44E-115 T 13-10-2018 TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 SMART SM00116 153 201 0.0019 T 13-10-2018 IPR000644 CBS domain TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 SMART SM00116 93 141 0.001 T 13-10-2018 IPR000644 CBS domain TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 5 464 4.2E-148 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 Pfam PF00571 CBS domain 93 137 1.5E-5 T 13-10-2018 IPR000644 CBS domain TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 Pfam PF00571 CBS domain 146 195 5.1E-8 T 13-10-2018 IPR000644 CBS domain TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 5 445 2.3E-170 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TREPR_0226 de1960b986922e483e4a32b1cc13d1b4 478 Gene3D G3DSA:3.20.20.70 1 477 2.0E-189 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 Gene3D G3DSA:3.10.20.400 239 339 1.1E-26 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 367 436 3.1E-13 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 SUPERFAMILY SSF51366 1 248 2.62E-40 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 Gene3D G3DSA:1.10.287.1080 352 438 5.7E-18 T 13-10-2018 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 298 347 8.0E-7 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 Pfam PF00977 Histidine biosynthesis protein 1 243 2.2E-45 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 SUPERFAMILY SSF101386 355 436 4.11E-15 T 13-10-2018 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 Gene3D G3DSA:3.20.20.70 1 231 5.3E-50 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 357 432 3.9E-17 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 SUPERFAMILY SSF141734 249 355 1.44E-35 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 TREPR_3206 0643ebbf74a1f62dd4f6a1c9be1abd13 438 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 275 347 1.6E-27 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 TREPR_1826 ed3d3074d04b5944c450d60a819b5d7c 741 SUPERFAMILY SSF52540 514 707 1.09E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1826 ed3d3074d04b5944c450d60a819b5d7c 741 SMART SM00382 521 663 2.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1826 ed3d3074d04b5944c450d60a819b5d7c 741 Gene3D G3DSA:3.40.50.300 461 679 1.4E-34 T 13-10-2018 TREPR_1826 ed3d3074d04b5944c450d60a819b5d7c 741 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 526 660 1.7E-23 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_0805 e24c15ee10c7a5818413ee61218b265e 404 SUPERFAMILY SSF50998 153 308 2.35E-11 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TREPR_0805 e24c15ee10c7a5818413ee61218b265e 404 Gene3D G3DSA:2.130.10.10 138 391 1.9E-5 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2677 62eb1007df065386b928aee09eb2949f 451 Gene3D G3DSA:2.30.42.10 220 301 2.0E-11 T 13-10-2018 TREPR_2677 62eb1007df065386b928aee09eb2949f 451 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 125 191 2.8E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_2677 62eb1007df065386b928aee09eb2949f 451 Gene3D G3DSA:2.30.42.10 139 219 8.1E-18 T 13-10-2018 TREPR_2677 62eb1007df065386b928aee09eb2949f 451 Pfam PF02163 Peptidase family M50 10 436 5.3E-64 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 TREPR_2677 62eb1007df065386b928aee09eb2949f 451 SUPERFAMILY SSF50156 209 285 1.1E-10 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 TREPR_2677 62eb1007df065386b928aee09eb2949f 451 SUPERFAMILY SSF50156 104 205 1.58E-15 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 TREPR_2677 62eb1007df065386b928aee09eb2949f 451 SMART SM00228 197 279 9.3E-6 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_2677 62eb1007df065386b928aee09eb2949f 451 SMART SM00228 124 196 1.6E-5 T 13-10-2018 IPR001478 PDZ domain GO:0005515 TREPR_1303 538df3444fd5c8e8831dfcc9d10ffc5b 482 Gene3D G3DSA:3.20.20.240 1 416 2.2E-181 T 13-10-2018 TREPR_1303 538df3444fd5c8e8831dfcc9d10ffc5b 482 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 481 3.8E-236 T 13-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TREPR_1303 538df3444fd5c8e8831dfcc9d10ffc5b 482 Pfam PF06368 Methylaspartate mutase E chain (MutE) 42 481 6.0E-233 T 13-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TREPR_1303 538df3444fd5c8e8831dfcc9d10ffc5b 482 SUPERFAMILY SSF51703 1 482 4.71E-203 T 13-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TREPR_1303 538df3444fd5c8e8831dfcc9d10ffc5b 482 PIRSF PIRSF001495 1 482 5.3E-223 T 13-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TREPR_1303 538df3444fd5c8e8831dfcc9d10ffc5b 482 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 481 57.137 T 13-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TREPR_1303 538df3444fd5c8e8831dfcc9d10ffc5b 482 Gene3D G3DSA:3.90.970.10 417 482 4.9E-28 T 13-10-2018 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 TREPR_2070 cf4661a045e777743551610b66be45bc 91 SUPERFAMILY SSF56672 11 71 3.89E-7 T 13-10-2018 TREPR_2070 cf4661a045e777743551610b66be45bc 91 Gene3D G3DSA:3.30.70.270 13 28 5.8E-6 T 13-10-2018 TREPR_2070 cf4661a045e777743551610b66be45bc 91 Gene3D G3DSA:2.30.40.20 29 67 5.8E-6 T 13-10-2018 TREPR_2070 cf4661a045e777743551610b66be45bc 91 Pfam PF00817 impB/mucB/samB family 20 67 2.5E-5 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TREPR_0561 74e11c3c139d5e7e6fb39913c7fe446f 419 Pfam PF07687 Peptidase dimerisation domain 210 315 1.1E-11 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain TREPR_0561 74e11c3c139d5e7e6fb39913c7fe446f 419 Gene3D G3DSA:3.40.630.10 22 404 5.5E-65 T 13-10-2018 TREPR_0561 74e11c3c139d5e7e6fb39913c7fe446f 419 SUPERFAMILY SSF53187 1 416 1.6E-52 T 13-10-2018 TREPR_0561 74e11c3c139d5e7e6fb39913c7fe446f 419 Gene3D G3DSA:3.30.70.360 214 337 5.5E-65 T 13-10-2018 TREPR_0561 74e11c3c139d5e7e6fb39913c7fe446f 419 SUPERFAMILY SSF55031 216 328 8.07E-18 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_0561 74e11c3c139d5e7e6fb39913c7fe446f 419 Pfam PF01546 Peptidase family M20/M25/M40 90 416 1.8E-30 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 SMART SM01003 4 137 8.5E-71 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 Gene3D G3DSA:3.40.50.720 130 305 3.0E-134 T 13-10-2018 TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 137 1.9E-44 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 SUPERFAMILY SSF52283 1 360 1.96E-61 T 13-10-2018 TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 13-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 5.1E-148 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 Gene3D G3DSA:3.40.50.720 3 353 3.0E-134 T 13-10-2018 TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 SUPERFAMILY SSF51735 137 303 9.37E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 SMART SM01002 149 297 2.6E-77 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.3E-78 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TREPR_3565 b5001220add91d9acf38a81b268bcef9 371 PIRSF PIRSF000183 1 371 4.1E-149 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 SMART SM00116 319 367 3.5 T 13-10-2018 IPR000644 CBS domain TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 SMART SM00116 382 429 2.7E-7 T 13-10-2018 IPR000644 CBS domain TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 Gene3D G3DSA:3.10.580.10 305 437 4.9E-26 T 13-10-2018 TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 SUPERFAMILY SSF54631 310 427 9.47E-27 T 13-10-2018 TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 Pfam PF02272 DHHA1 domain 169 298 4.2E-11 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 SUPERFAMILY SSF64182 3 290 4.71E-40 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 Pfam PF01368 DHH family 5 145 3.5E-6 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 Pfam PF00571 CBS domain 313 364 4.3E-7 T 13-10-2018 IPR000644 CBS domain TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 Pfam PF00571 CBS domain 375 427 3.1E-11 T 13-10-2018 IPR000644 CBS domain TREPR_1615 b58b077c21dc84ed3f44bcccd7f8e403 438 Gene3D G3DSA:3.90.1640.10 3 187 1.0E-21 T 13-10-2018 TREPR_1148 ea4aa06491de0c7ed1df62709c24f07d 687 Gene3D G3DSA:3.30.70.2170 7 303 3.9E-7 T 13-10-2018 TREPR_1148 ea4aa06491de0c7ed1df62709c24f07d 687 Pfam PF01496 V-type ATPase 116kDa subunit family 576 683 1.6E-13 T 13-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1148 ea4aa06491de0c7ed1df62709c24f07d 687 Pfam PF01496 V-type ATPase 116kDa subunit family 229 395 2.4E-14 T 13-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1148 ea4aa06491de0c7ed1df62709c24f07d 687 Gene3D G3DSA:1.20.1460.20 47 283 3.9E-7 T 13-10-2018 TREPR_1148 ea4aa06491de0c7ed1df62709c24f07d 687 Gene3D G3DSA:3.30.70.2750 144 216 3.9E-7 T 13-10-2018 TREPR_0572 132b18904b4d34dbf2b25c86d0b0b230 248 Pfam PF01171 PP-loop family 35 196 6.1E-14 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TREPR_0572 132b18904b4d34dbf2b25c86d0b0b230 248 PIRSF PIRSF004976 2 248 1.4E-48 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 TREPR_0572 132b18904b4d34dbf2b25c86d0b0b230 248 SUPERFAMILY SSF52402 15 220 5.59E-41 T 13-10-2018 TREPR_0572 132b18904b4d34dbf2b25c86d0b0b230 248 Gene3D G3DSA:3.40.50.620 5 248 3.4E-42 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2981 eb1bb2074cb7cebe870744595d5b88ab 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 6.9E-58 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2981 eb1bb2074cb7cebe870744595d5b88ab 142 Pfam PF00572 Ribosomal protein L13 14 138 3.3E-49 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TREPR_2981 eb1bb2074cb7cebe870744595d5b88ab 142 Gene3D G3DSA:3.90.1180.10 1 142 1.5E-55 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_2981 eb1bb2074cb7cebe870744595d5b88ab 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 25.653 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TREPR_2981 eb1bb2074cb7cebe870744595d5b88ab 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 TREPR_2981 eb1bb2074cb7cebe870744595d5b88ab 142 SUPERFAMILY SSF52161 1 139 2.22E-52 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_2981 eb1bb2074cb7cebe870744595d5b88ab 142 PIRSF PIRSF002181 1 141 3.8E-44 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SUPERFAMILY SSF51126 480 853 4.4E-7 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 749 770 900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 935 960 4300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 571 596 1500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 597 622 3300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 692 713 6400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 720 743 2100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 863 884 7700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 827 853 1800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 886 911 530.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 775 796 62.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 627 656 2500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SMART SM00710 801 822 770.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 SUPERFAMILY SSF51126 789 996 3.39E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_3174 8fed97ac93a89c406874df1b815f48c3 1074 Gene3D G3DSA:2.160.20.20 680 1029 8.6E-10 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TREPR_2353 d4e491f1e2fd425557f49bc5dcb3ff23 410 Gene3D G3DSA:2.40.40.10 19 103 5.1E-7 T 13-10-2018 IPR036908 RlpA-like domain superfamily TREPR_2353 d4e491f1e2fd425557f49bc5dcb3ff23 410 SUPERFAMILY SSF110997 337 409 3.4E-9 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TREPR_2353 d4e491f1e2fd425557f49bc5dcb3ff23 410 Gene3D G3DSA:3.30.70.1070 338 410 5.9E-5 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TREPR_2353 d4e491f1e2fd425557f49bc5dcb3ff23 410 Pfam PF05036 Sporulation related domain 337 409 2.4E-7 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 TREPR_0203 03a2268361e8eb79e051ba9ba5db9d80 337 Gene3D G3DSA:3.90.550.10 1 252 3.2E-72 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0203 03a2268361e8eb79e051ba9ba5db9d80 337 Pfam PF00535 Glycosyl transferase family 2 5 121 2.5E-31 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_0203 03a2268361e8eb79e051ba9ba5db9d80 337 SUPERFAMILY SSF53448 2 206 5.25E-62 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0393 241843f39fa2237be4cc3012d33b8c08 484 SUPERFAMILY SSF53223 39 192 9.35E-42 T 13-10-2018 TREPR_0393 241843f39fa2237be4cc3012d33b8c08 484 SUPERFAMILY SSF51735 195 449 5.71E-66 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0393 241843f39fa2237be4cc3012d33b8c08 484 Pfam PF00390 Malic enzyme, N-terminal domain 63 182 1.1E-15 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TREPR_0393 241843f39fa2237be4cc3012d33b8c08 484 SMART SM01274 43 182 1.7E-52 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TREPR_0393 241843f39fa2237be4cc3012d33b8c08 484 Gene3D G3DSA:3.40.50.720 192 484 5.6E-102 T 13-10-2018 TREPR_0393 241843f39fa2237be4cc3012d33b8c08 484 SMART SM00919 194 425 9.5E-89 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TREPR_0393 241843f39fa2237be4cc3012d33b8c08 484 Pfam PF03949 Malic enzyme, NAD binding domain 195 424 1.7E-22 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TREPR_0393 241843f39fa2237be4cc3012d33b8c08 484 Gene3D G3DSA:3.40.50.10380 1 191 4.0E-67 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 TREPR_0393 241843f39fa2237be4cc3012d33b8c08 484 PIRSF PIRSF000106 7 455 1.3E-95 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 TREPR_1772 08ae4f49fde6b453f0f0163e0f1a036f 419 Pfam PF02687 FtsX-like permease family 296 407 1.2E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TREPR_1772 08ae4f49fde6b453f0f0163e0f1a036f 419 Pfam PF12704 MacB-like periplasmic core domain 30 226 8.6E-11 T 13-10-2018 IPR025857 MacB-like periplasmic core domain TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 SUPERFAMILY SSF53335 232 660 7.22E-63 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 Pfam PF12950 TaqI-like C-terminal specificity domain 761 877 1.4E-17 T 13-10-2018 IPR025931 TaqI-like C-terminal specificity domain TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 Gene3D G3DSA:3.40.50.150 323 698 2.5E-61 T 13-10-2018 TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 556 562 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 Pfam PF02384 N-6 DNA Methylase 550 661 9.4E-10 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 Pfam PF02384 N-6 DNA Methylase 356 484 7.4E-8 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 17 139 1.4E-6 T 13-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 361 377 3.7E-18 T 13-10-2018 TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 395 409 3.7E-18 T 13-10-2018 TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 553 565 3.7E-18 T 13-10-2018 TREPR_0948 d2a17cd917929445c869e53a6beeb494 951 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 586 610 3.7E-18 T 13-10-2018 TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 ProSitePatterns PS00746 NifH/frxC family signature 1. 84 96 - T 13-10-2018 IPR030655 NifH/chlL conserved site TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 PIRSF PIRSF000363 1 253 6.4E-100 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 Gene3D G3DSA:3.40.50.300 1 252 6.2E-61 T 13-10-2018 TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 PRINTS PR00091 Nitrogenase component II signature 82 96 8.8E-34 T 13-10-2018 TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 PRINTS PR00091 Nitrogenase component II signature 122 137 8.8E-34 T 13-10-2018 TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 PRINTS PR00091 Nitrogenase component II signature 7 20 8.8E-34 T 13-10-2018 TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 PRINTS PR00091 Nitrogenase component II signature 29 44 8.8E-34 T 13-10-2018 TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 SUPERFAMILY SSF52540 1 245 1.11E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 ProSitePatterns PS00692 NifH/frxC family signature 2. 123 136 - T 13-10-2018 IPR030655 NifH/chlL conserved site TREPR_3541 fbcc6b2f8b755af6115fc7c0362309ee 255 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 2 241 2.4E-92 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 TREPR_0033 08d3ab01ef5be0334dcb3e95a965e08f 248 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 50 90 - T 13-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 TREPR_0033 08d3ab01ef5be0334dcb3e95a965e08f 248 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 248 35.759 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 TREPR_0033 08d3ab01ef5be0334dcb3e95a965e08f 248 Gene3D G3DSA:3.40.50.1580 1 248 1.1E-91 T 13-10-2018 TREPR_0033 08d3ab01ef5be0334dcb3e95a965e08f 248 SUPERFAMILY SSF53167 3 248 5.76E-83 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TREPR_0033 08d3ab01ef5be0334dcb3e95a965e08f 248 Pfam PF01048 Phosphorylase superfamily 4 245 8.2E-46 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TREPR_0033 08d3ab01ef5be0334dcb3e95a965e08f 248 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 246 1.7E-86 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 TREPR_0212 ba66ca2df19e1f4dc44016569ec7b6d8 145 Pfam PF01850 PIN domain 16 138 9.3E-15 T 13-10-2018 IPR002716 PIN domain TREPR_0212 ba66ca2df19e1f4dc44016569ec7b6d8 145 Gene3D G3DSA:3.40.50.1010 11 145 1.5E-37 T 13-10-2018 TREPR_0212 ba66ca2df19e1f4dc44016569ec7b6d8 145 SUPERFAMILY SSF88723 14 144 3.08E-35 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_3129 8e35861f46d5d12d13ccd6e992f0b6ac 187 Pfam PF02361 Cobalt transport protein 6 185 2.0E-7 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 SUPERFAMILY SSF48452 903 1028 1.74E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 SMART SM00028 766 799 10.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 SMART SM00028 800 833 390.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 SMART SM00028 834 867 38.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 SMART SM00028 975 1008 49.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 SMART SM00460 465 536 1.3E-20 T 13-10-2018 IPR002931 Transglutaminase-like TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 Gene3D G3DSA:3.10.620.30 395 554 3.0E-20 T 13-10-2018 TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 SUPERFAMILY SSF48452 767 930 1.58E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 Pfam PF01841 Transglutaminase-like superfamily 419 534 1.1E-24 T 13-10-2018 IPR002931 Transglutaminase-like TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 Gene3D G3DSA:1.25.40.10 897 1045 4.2E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 Gene3D G3DSA:1.25.40.10 756 896 2.7E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0180 6ef753a6371736827a0177c68c8d809f 1339 SUPERFAMILY SSF54001 417 541 3.5E-33 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_1925 77bb72053b4ef59414bb791a1ec7ae9f 134 Gene3D G3DSA:3.40.50.300 1 133 5.6E-36 T 13-10-2018 TREPR_1925 77bb72053b4ef59414bb791a1ec7ae9f 134 SUPERFAMILY SSF52540 7 120 2.28E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1925 77bb72053b4ef59414bb791a1ec7ae9f 134 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 2 116 3.4E-30 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TREPR_1925 77bb72053b4ef59414bb791a1ec7ae9f 134 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 3 128 1.6E-31 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 Gene3D G3DSA:3.90.20.20 49 162 2.8E-28 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 SUPERFAMILY SSF58014 66 161 2.35E-23 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 ProSitePatterns PS01071 grpE protein signature. 175 218 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 Gene3D G3DSA:2.30.22.10 164 219 2.9E-17 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 Pfam PF01025 GrpE 61 218 3.7E-47 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 PRINTS PR00773 GrpE protein signature 85 101 1.0E-25 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 PRINTS PR00773 GrpE protein signature 172 187 1.0E-25 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 PRINTS PR00773 GrpE protein signature 199 218 1.0E-25 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 PRINTS PR00773 GrpE protein signature 113 128 1.0E-25 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 Hamap MF_01151 Protein GrpE [grpE]. 9 220 18.605 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TREPR_0313 fc508ee486597e4d57fc909b8183f26c 227 SUPERFAMILY SSF51064 165 220 3.27E-15 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TREPR_0655 24bdfc0210cdfb7d5d90c763fd386d16 507 PIRSF PIRSF000538 2 506 7.6E-143 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TREPR_0655 24bdfc0210cdfb7d5d90c763fd386d16 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 8.8E-56 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TREPR_0655 24bdfc0210cdfb7d5d90c763fd386d16 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 454 4.8E-36 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TREPR_0655 24bdfc0210cdfb7d5d90c763fd386d16 507 Gene3D G3DSA:3.30.420.40 1 242 5.1E-74 T 13-10-2018 TREPR_0655 24bdfc0210cdfb7d5d90c763fd386d16 507 SUPERFAMILY SSF53067 3 254 1.23E-63 T 13-10-2018 TREPR_0655 24bdfc0210cdfb7d5d90c763fd386d16 507 Gene3D G3DSA:3.30.420.40 254 507 5.1E-67 T 13-10-2018 TREPR_0655 24bdfc0210cdfb7d5d90c763fd386d16 507 SUPERFAMILY SSF53067 253 498 5.62E-56 T 13-10-2018 TREPR_3815 76eee7b90d68fc0dacaf3db0dadba47e 218 SUPERFAMILY SSF51206 15 121 5.76E-30 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like TREPR_3815 76eee7b90d68fc0dacaf3db0dadba47e 218 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 65 82 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TREPR_3815 76eee7b90d68fc0dacaf3db0dadba47e 218 Pfam PF00027 Cyclic nucleotide-binding domain 17 101 4.8E-23 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_3815 76eee7b90d68fc0dacaf3db0dadba47e 218 Gene3D G3DSA:2.60.120.10 1 128 9.5E-34 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_3815 76eee7b90d68fc0dacaf3db0dadba47e 218 SMART SM00100 1 115 6.4E-18 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_3815 76eee7b90d68fc0dacaf3db0dadba47e 218 PRINTS PR00103 cAMP-dependent protein kinase signature 34 48 2.4E-7 T 13-10-2018 TREPR_3815 76eee7b90d68fc0dacaf3db0dadba47e 218 PRINTS PR00103 cAMP-dependent protein kinase signature 63 72 2.4E-7 T 13-10-2018 TREPR_3815 76eee7b90d68fc0dacaf3db0dadba47e 218 PRINTS PR00103 cAMP-dependent protein kinase signature 75 86 2.4E-7 T 13-10-2018 TREPR_3815 76eee7b90d68fc0dacaf3db0dadba47e 218 PRINTS PR00103 cAMP-dependent protein kinase signature 19 33 2.4E-7 T 13-10-2018 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 563 2.0E-197 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 SUPERFAMILY SSF50677 194 345 1.44E-58 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 SUPERFAMILY SSF46589 831 894 3.77E-11 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 SUPERFAMILY SSF47323 578 842 1.2E-50 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 878 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 4.7E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 4.7E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 PRINTS PR00986 Valyl-tRNA synthetase signature 349 362 4.7E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 PRINTS PR00986 Valyl-tRNA synthetase signature 447 468 4.7E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 PRINTS PR00986 Valyl-tRNA synthetase signature 478 496 4.7E-37 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 831 894 4.8E-9 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 Pfam PF08264 Anticodon-binding domain of tRNA 606 763 3.5E-38 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 Gene3D G3DSA:3.90.740.10 178 346 0.0 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 Gene3D G3DSA:1.10.287.380 826 895 1.1E-8 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 Hamap MF_02004 Valine--tRNA ligase [valS]. 6 896 15.199 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 SUPERFAMILY SSF52374 5 570 3.94E-138 T 13-10-2018 TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 Gene3D G3DSA:3.40.50.620 26 527 0.0 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1570 fd6410aa0941d1e6997cb69fb9f241bd 896 Gene3D G3DSA:1.10.730.10 6 749 0.0 T 13-10-2018 TREPR_0464 fcf16958be0f308ef90d8b5789cd891c 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 9.5E-21 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0464 fcf16958be0f308ef90d8b5789cd891c 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.2E-13 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0464 fcf16958be0f308ef90d8b5789cd891c 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.2E-13 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0464 fcf16958be0f308ef90d8b5789cd891c 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.2E-13 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0464 fcf16958be0f308ef90d8b5789cd891c 88 Gene3D G3DSA:3.30.1340.10 1 88 3.0E-27 T 13-10-2018 IPR035895 HPr-like superfamily TREPR_0464 fcf16958be0f308ef90d8b5789cd891c 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.7E-23 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_0464 fcf16958be0f308ef90d8b5789cd891c 88 SUPERFAMILY SSF55594 1 88 7.33E-24 T 13-10-2018 IPR035895 HPr-like superfamily TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 SUPERFAMILY SSF52374 29 355 4.9E-89 T 13-10-2018 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 Gene3D G3DSA:1.10.1160.10 270 348 1.6E-32 T 13-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 349 542 6.8E-55 T 13-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 Gene3D G3DSA:3.90.800.10 102 219 1.7E-91 T 13-10-2018 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 220 230 3.2E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 44 3.2E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 61 74 3.2E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 29 346 2.1E-95 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 Gene3D G3DSA:2.40.240.10 350 560 5.9E-77 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 Gene3D G3DSA:2.40.240.10 357 475 5.9E-77 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 2 563 48.491 T 13-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 Gene3D G3DSA:3.40.50.620 29 256 1.7E-91 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 29 565 7.0E-202 T 13-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TREPR_0553 cfe315cf4c2b45b904fb05ea2c510cff 572 SUPERFAMILY SSF50715 349 561 1.1E-67 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_1962 b2a60c8aca4fc0f9dfa429346fd6fa23 322 Gene3D G3DSA:3.20.20.210 1 311 1.1E-49 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1962 b2a60c8aca4fc0f9dfa429346fd6fa23 322 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 116 294 8.1E-22 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_1962 b2a60c8aca4fc0f9dfa429346fd6fa23 322 SUPERFAMILY SSF51726 3 293 6.98E-34 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Gene3D G3DSA:1.10.40.90 363 405 8.4E-18 T 13-10-2018 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Gene3D G3DSA:1.10.132.30 631 769 2.1E-63 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1409 18.765 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1399 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Gene3D G3DSA:1.10.274.100 479 549 1.0E-18 T 13-10-2018 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Gene3D G3DSA:1.10.274.100 550 630 4.9E-14 T 13-10-2018 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Gene3D G3DSA:1.10.150.390 1348 1410 1.7E-28 T 13-10-2018 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Gene3D G3DSA:2.40.50.100 1054 1159 2.7E-18 T 13-10-2018 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 1.2E-91 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Gene3D G3DSA:1.10.1790.20 1168 1346 1.4E-61 T 13-10-2018 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 SUPERFAMILY SSF64484 6 1399 0.0 T 13-10-2018 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 634 1.3E-19 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Pfam PF00623 RNA polymerase Rpb1, domain 2 383 474 5.6E-26 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 378 3.9E-8 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 SMART SM00663 224 503 9.7E-171 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Pfam PF05000 RNA polymerase Rpb1, domain 4 663 740 6.3E-17 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Gene3D G3DSA:2.40.50.100 1184 1247 1.4E-61 T 13-10-2018 TREPR_0931 15115e5fe3fb798cd33af0b7ecf04b02 1445 Pfam PF04998 RNA polymerase Rpb1, domain 5 745 1348 4.1E-73 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TREPR_0181 bccb56ac9c3859476ff3fa56b4acd42b 151 PIRSF PIRSF003230 15 142 6.3E-26 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TREPR_0181 bccb56ac9c3859476ff3fa56b4acd42b 151 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 25 129 2.0E-20 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TREPR_0181 bccb56ac9c3859476ff3fa56b4acd42b 151 Pfam PF13279 Thioesterase-like superfamily 25 137 4.0E-14 T 13-10-2018 TREPR_0181 bccb56ac9c3859476ff3fa56b4acd42b 151 SUPERFAMILY SSF54637 20 139 3.34E-35 T 13-10-2018 IPR029069 HotDog domain superfamily TREPR_0181 bccb56ac9c3859476ff3fa56b4acd42b 151 Gene3D G3DSA:3.10.129.10 18 141 4.4E-34 T 13-10-2018 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 Gene3D G3DSA:1.10.287.130 343 422 1.7E-11 T 13-10-2018 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 SMART SM00388 359 430 1.5E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 SUPERFAMILY SSF55874 418 578 3.27E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 SUPERFAMILY SSF158472 297 346 3.66E-11 T 13-10-2018 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 Gene3D G3DSA:1.10.8.500 296 342 7.1E-10 T 13-10-2018 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 SUPERFAMILY SSF47384 355 427 5.3E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 Pfam PF00672 HAMP domain 297 345 1.5E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 Gene3D G3DSA:3.30.565.10 423 578 6.5E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 SMART SM00304 297 349 2.6E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 SMART SM00387 470 580 9.8E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 579 4.6E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 1.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 558 1.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 577 1.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0685 7e71d146930ec6ac04111227e2562f3d 598 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 1.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 Pfam PF16326 ABC transporter C-terminal domain 627 690 4.2E-9 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 SMART SM00382 352 519 2.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 SMART SM00382 28 275 1.5E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 SUPERFAMILY SSF52540 307 517 4.8E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 ProSitePatterns PS00211 ABC transporters family signature. 446 460 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 Gene3D G3DSA:3.40.50.300 291 531 3.0E-55 T 13-10-2018 TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 Pfam PF00005 ABC transporter 19 193 5.5E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 Pfam PF12848 ABC transporter 233 313 1.3E-23 T 13-10-2018 IPR032781 ABC-transporter extension domain TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 SUPERFAMILY SSF52540 4 261 5.33E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 Pfam PF00005 ABC transporter 344 474 9.7E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0556 6bb1cd1a35fbe068d3cb5722e4fa85bb 702 Gene3D G3DSA:3.40.50.300 3 287 2.5E-58 T 13-10-2018 TREPR_1126 6a16c63d341f79de5cf9c4234da1b4d6 234 PIRSF PIRSF039137 1 234 5.6E-110 T 13-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 TREPR_1126 6a16c63d341f79de5cf9c4234da1b4d6 234 Pfam PF00005 ABC transporter 17 162 1.2E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1126 6a16c63d341f79de5cf9c4234da1b4d6 234 SUPERFAMILY SSF52540 2 232 1.22E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1126 6a16c63d341f79de5cf9c4234da1b4d6 234 Gene3D G3DSA:3.40.50.300 1 234 2.3E-61 T 13-10-2018 TREPR_1126 6a16c63d341f79de5cf9c4234da1b4d6 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1126 6a16c63d341f79de5cf9c4234da1b4d6 234 SMART SM00382 26 217 5.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1425 2c19c4e81ad11cbbd7eea85c5cbeca83 336 Gene3D G3DSA:1.10.287.470 98 140 6.2E-25 T 13-10-2018 TREPR_1425 2c19c4e81ad11cbbd7eea85c5cbeca83 336 SUPERFAMILY SSF111369 52 245 1.57E-12 T 13-10-2018 TREPR_1425 2c19c4e81ad11cbbd7eea85c5cbeca83 336 Gene3D G3DSA:2.40.420.20 255 311 6.2E-25 T 13-10-2018 TREPR_1425 2c19c4e81ad11cbbd7eea85c5cbeca83 336 Gene3D G3DSA:2.40.50.100 35 97 5.0E-5 T 13-10-2018 TREPR_1425 2c19c4e81ad11cbbd7eea85c5cbeca83 336 Gene3D G3DSA:2.40.30.170 176 254 6.2E-25 T 13-10-2018 TREPR_1425 2c19c4e81ad11cbbd7eea85c5cbeca83 336 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 244 2.2E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TREPR_1425 2c19c4e81ad11cbbd7eea85c5cbeca83 336 Gene3D G3DSA:2.40.50.100 141 175 6.2E-25 T 13-10-2018 TREPR_0499 cacb754555727dfe37338619ef94cbbd 328 SUPERFAMILY SSF53335 162 265 3.03E-17 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0499 cacb754555727dfe37338619ef94cbbd 328 Pfam PF01728 FtsJ-like methyltransferase 163 250 1.6E-9 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TREPR_0499 cacb754555727dfe37338619ef94cbbd 328 Gene3D G3DSA:3.40.50.150 156 326 1.9E-46 T 13-10-2018 TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 Pfam PF00271 Helicase conserved C-terminal domain 529 637 5.4E-16 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 Gene3D G3DSA:3.40.50.300 256 498 1.6E-73 T 13-10-2018 TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 727 3.0E-201 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 SUPERFAMILY SSF50249 4 182 2.4E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 SMART SM00487 292 508 3.5E-30 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 Pfam PF17191 RecG wedge domain 12 176 3.2E-14 T 13-10-2018 IPR033454 RecG, wedge domain TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 Gene3D G3DSA:3.40.50.300 506 693 4.3E-55 T 13-10-2018 TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 SUPERFAMILY SSF52540 365 651 1.41E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 SMART SM00490 553 638 1.6E-21 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_3819 dd7dfed1b8d230de3013ba38a1edae2f 761 Pfam PF00270 DEAD/DEAH box helicase 298 482 3.5E-17 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_0003 a8c3366bd0e3b58b00dca16d45694183 479 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 137 365 3.2E-28 T 13-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT TREPR_0003 a8c3366bd0e3b58b00dca16d45694183 479 PIRSF PIRSF016636 1 479 1.6E-112 T 13-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB TREPR_0003 a8c3366bd0e3b58b00dca16d45694183 479 PIRSF PIRSF500217 1 479 9.1E-113 T 13-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 459 470 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 27 301 8.0E-47 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 310 365 4.6E-12 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 SUPERFAMILY SSF51621 547 884 4.54E-121 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 776 794 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Gene3D G3DSA:1.10.189.10 354 535 9.3E-75 T 13-10-2018 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 PIRSF PIRSF000853 7 894 0.0 T 13-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 8 886 0.0 T 13-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Gene3D G3DSA:3.30.470.20 253 350 3.2E-40 T 13-10-2018 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Gene3D G3DSA:3.20.20.60 548 888 2.5E-145 T 13-10-2018 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Gene3D G3DSA:1.20.80.30 120 207 1.1E-104 T 13-10-2018 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 SUPERFAMILY SSF52009 398 519 3.53E-35 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 SUPERFAMILY SSF56059 6 388 9.42E-140 T 13-10-2018 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Pfam PF00391 PEP-utilising enzyme, mobile domain 431 510 1.5E-25 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 548 883 5.0E-86 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Gene3D G3DSA:3.50.30.10 392 512 9.3E-75 T 13-10-2018 TREPR_2255 236e794c6ddfdf84c367c4fc8d7fda64 1002 Gene3D G3DSA:3.30.1490.20 20 252 1.1E-104 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 190 8.6E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 Gene3D G3DSA:1.10.150.240 26 100 1.2E-37 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 9.8E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 110 123 9.8E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 158 178 9.8E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 14 25 9.8E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 78 191 2.8E-9 T 13-10-2018 TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 Gene3D G3DSA:3.40.50.1000 14 191 1.2E-37 T 13-10-2018 IPR023214 HAD superfamily TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 SUPERFAMILY SSF56784 15 196 1.78E-30 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_1987 32c6fdc3518499e2f4f511d1bedc7a08 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 99 192 1.6E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_3605 6f2afcd3a4777beeb4aceafbecb96b37 142 Pfam PF01475 Ferric uptake regulator family 9 110 8.9E-23 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TREPR_3605 6f2afcd3a4777beeb4aceafbecb96b37 142 SUPERFAMILY SSF46785 5 111 1.43E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_3605 6f2afcd3a4777beeb4aceafbecb96b37 142 Gene3D G3DSA:1.10.10.10 3 76 6.5E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3605 6f2afcd3a4777beeb4aceafbecb96b37 142 Gene3D G3DSA:3.30.1490.190 78 141 1.1E-9 T 13-10-2018 TREPR_3448 e71e7110b92d0ece9663d5314c4ef01c 110 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 109 24.387 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3448 e71e7110b92d0ece9663d5314c4ef01c 110 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 107 2.3E-36 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3448 e71e7110b92d0ece9663d5314c4ef01c 110 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 108 1.4E-32 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3448 e71e7110b92d0ece9663d5314c4ef01c 110 ProSitePatterns PS01169 Ribosomal protein L21 signature. 78 100 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_3448 e71e7110b92d0ece9663d5314c4ef01c 110 SUPERFAMILY SSF141091 1 107 6.8E-33 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 Gene3D G3DSA:1.10.720.90 2 55 4.3E-19 T 13-10-2018 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 8.7E-48 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 SUPERFAMILY SSF74731 3 117 1.02E-41 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 Gene3D G3DSA:1.10.1900.20 56 120 3.0E-25 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.6E-34 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.6E-34 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.6E-34 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 26.039 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 Pfam PF00453 Ribosomal protein L20 3 108 1.1E-41 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1647 1e283bafa6a09eecec7f9d2d30cfede2 122 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 1.0E-6 T 13-10-2018 TREPR_1011 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_1011 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 Pfam PF00872 Transposase, Mutator family 23 380 9.6E-119 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_2064 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_2064 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 Pfam PF00872 Transposase, Mutator family 23 380 9.6E-119 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_2268 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_2268 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 Pfam PF00872 Transposase, Mutator family 23 380 9.6E-119 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_2392 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_2392 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 Pfam PF00872 Transposase, Mutator family 23 380 9.6E-119 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_2157 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_2157 fa10c84963d5d3c2d63fcaa2f1a75bd1 404 Pfam PF00872 Transposase, Mutator family 23 380 9.6E-119 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_1081 4daefe752b275327bc07dc7a8eec3326 350 SMART SM00014 56 197 1.3E-18 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TREPR_1081 4daefe752b275327bc07dc7a8eec3326 350 Gene3D G3DSA:1.20.144.10 89 218 6.2E-20 T 13-10-2018 TREPR_1081 4daefe752b275327bc07dc7a8eec3326 350 Gene3D G3DSA:1.20.144.10 1 88 5.1E-6 T 13-10-2018 TREPR_1081 4daefe752b275327bc07dc7a8eec3326 350 Pfam PF01569 PAP2 superfamily 59 201 1.1E-26 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TREPR_1081 4daefe752b275327bc07dc7a8eec3326 350 SUPERFAMILY SSF48317 8 202 8.24E-30 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TREPR_0715 0fd1fe6f2983a5d52c60391772617615 198 Pfam PF02151 UvrB/uvrC motif 166 187 1.8E-5 T 13-10-2018 IPR001943 UVR domain GO:0005515 TREPR_0715 0fd1fe6f2983a5d52c60391772617615 198 SUPERFAMILY SSF103256 18 137 4.32E-29 T 13-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 TREPR_0715 0fd1fe6f2983a5d52c60391772617615 198 Gene3D G3DSA:3.10.690.10 2 143 1.6E-34 T 13-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 TREPR_0715 0fd1fe6f2983a5d52c60391772617615 198 Pfam PF02577 Bifunctional nuclease 18 136 1.9E-32 T 13-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 TREPR_0974 00db7019c6a898b080e3e5d7023a2da3 342 SUPERFAMILY SSF143631 30 330 4.45E-98 T 13-10-2018 IPR003374 ApbE-like superfamily TREPR_0974 00db7019c6a898b080e3e5d7023a2da3 342 PIRSF PIRSF006268 2 335 3.1E-105 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TREPR_0974 00db7019c6a898b080e3e5d7023a2da3 342 Pfam PF02424 ApbE family 36 313 9.3E-87 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TREPR_0974 00db7019c6a898b080e3e5d7023a2da3 342 Gene3D G3DSA:3.10.520.20 24 341 6.9E-115 T 13-10-2018 TREPR_0434 a804b4105fa38bb4bc66512281536c86 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 320 8.7E-33 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_2168 4c8aa0b2d96882cbaebeb13e49afe58e 201 SUPERFAMILY SSF140931 48 198 1.96E-30 T 13-10-2018 IPR036597 Fido-like domain superfamily TREPR_2168 4c8aa0b2d96882cbaebeb13e49afe58e 201 Gene3D G3DSA:1.10.3290.10 2 201 5.5E-59 T 13-10-2018 IPR036597 Fido-like domain superfamily TREPR_2168 4c8aa0b2d96882cbaebeb13e49afe58e 201 Pfam PF02661 Fic/DOC family 59 154 3.5E-17 T 13-10-2018 IPR003812 Fido domain TREPR_1533 3b74b1ddf3f3c79eb6730dd4ac157e75 600 SUPERFAMILY SSF53850 54 591 8.32E-74 T 13-10-2018 TREPR_1533 3b74b1ddf3f3c79eb6730dd4ac157e75 600 Gene3D G3DSA:3.40.190.10 64 577 1.7E-75 T 13-10-2018 TREPR_1533 3b74b1ddf3f3c79eb6730dd4ac157e75 600 PIRSF PIRSF002741 15 589 4.3E-51 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_1533 3b74b1ddf3f3c79eb6730dd4ac157e75 600 Gene3D G3DSA:3.90.76.10 87 229 1.7E-75 T 13-10-2018 TREPR_1533 3b74b1ddf3f3c79eb6730dd4ac157e75 600 Gene3D G3DSA:3.10.105.10 331 567 1.7E-75 T 13-10-2018 TREPR_1533 3b74b1ddf3f3c79eb6730dd4ac157e75 600 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 112 510 4.5E-54 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_0892 392da5ddec34f4b0d73647af748f3f7e 292 Pfam PF12705 PD-(D/E)XK nuclease superfamily 55 277 1.4E-7 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TREPR_3620 f9bb24b59c3a5dd5c085255f25b2899c 105 Pfam PF02627 Carboxymuconolactone decarboxylase family 15 94 4.1E-11 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TREPR_3620 f9bb24b59c3a5dd5c085255f25b2899c 105 SUPERFAMILY SSF69118 4 102 9.42E-19 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TREPR_3620 f9bb24b59c3a5dd5c085255f25b2899c 105 Gene3D G3DSA:1.20.1290.10 2 102 1.7E-21 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TREPR_3131 7d8ccb322f1a4216a4c7d8f3e5687aca 184 Pfam PF12822 ECF transporter, substrate-specific component 5 157 1.6E-15 T 13-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 TREPR_3131 7d8ccb322f1a4216a4c7d8f3e5687aca 184 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 2 159 4.7E-46 T 13-10-2018 IPR030949 ECF transporter S component, folate family TREPR_3131 7d8ccb322f1a4216a4c7d8f3e5687aca 184 Gene3D G3DSA:1.10.1760.20 3 169 2.5E-40 T 13-10-2018 TREPR_0372 0091609d8bdc1e429f7508c73c7c5c68 197 SUPERFAMILY SSF48150 15 196 2.04E-76 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TREPR_0372 0091609d8bdc1e429f7508c73c7c5c68 197 Pfam PF03352 Methyladenine glycosylase 19 194 6.0E-76 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 TREPR_0372 0091609d8bdc1e429f7508c73c7c5c68 197 Gene3D G3DSA:1.10.340.30 14 197 8.7E-78 T 13-10-2018 TREPR_1485 bb206eef78d3183562eb856225eec5a1 73 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 57 3.6E-9 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1485 bb206eef78d3183562eb856225eec5a1 73 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 59 13.033 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1485 bb206eef78d3183562eb856225eec5a1 73 Pfam PF00831 Ribosomal L29 protein 5 57 3.8E-14 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1485 bb206eef78d3183562eb856225eec5a1 73 Gene3D G3DSA:1.10.287.310 3 66 1.5E-13 T 13-10-2018 TREPR_1485 bb206eef78d3183562eb856225eec5a1 73 SUPERFAMILY SSF46561 5 61 4.45E-13 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_2546 0f088521bda01515722e6c8f1b107d16 227 Pfam PF00005 ABC transporter 21 172 1.4E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2546 0f088521bda01515722e6c8f1b107d16 227 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2546 0f088521bda01515722e6c8f1b107d16 227 SMART SM00382 30 220 7.5E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2546 0f088521bda01515722e6c8f1b107d16 227 SUPERFAMILY SSF52540 1 224 4.95E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2546 0f088521bda01515722e6c8f1b107d16 227 Gene3D G3DSA:3.40.50.300 1 227 5.4E-74 T 13-10-2018 TREPR_3345 b6382376f6e724db1a76ea4da8d0981a 272 Gene3D G3DSA:3.40.190.10 103 225 1.1E-35 T 13-10-2018 TREPR_3345 b6382376f6e724db1a76ea4da8d0981a 272 SUPERFAMILY SSF53850 35 265 9.51E-30 T 13-10-2018 TREPR_3345 b6382376f6e724db1a76ea4da8d0981a 272 Gene3D G3DSA:3.40.190.10 38 261 1.1E-35 T 13-10-2018 TREPR_3345 b6382376f6e724db1a76ea4da8d0981a 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 263 8.4E-28 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_3345 b6382376f6e724db1a76ea4da8d0981a 272 SMART SM00062 33 266 1.0E-12 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0299 9fe6f9b59861efd7791d2f982d3b452e 306 Gene3D G3DSA:3.30.2010.10 120 181 6.8E-9 T 13-10-2018 TREPR_0299 9fe6f9b59861efd7791d2f982d3b452e 306 Pfam PF01435 Peptidase family M48 124 284 1.3E-27 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SUPERFAMILY SSF52540 379 465 1.15E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Gene3D G3DSA:3.30.2060.10 149 239 2.7E-52 T 13-10-2018 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SUPERFAMILY SSF52540 525 784 2.53E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SMART SM00487 601 793 4.7E-31 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SUPERFAMILY SSF143517 991 1144 2.48E-30 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 168 1077 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Gene3D G3DSA:3.40.50.300 543 782 4.7E-233 T 13-10-2018 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1104 26.755 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Gene3D G3DSA:3.40.50.11180 40 356 2.7E-52 T 13-10-2018 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Gene3D G3DSA:3.40.50.300 480 990 4.7E-233 T 13-10-2018 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SMART SM01058 480 577 1.1E-43 T 13-10-2018 IPR003711 CarD-like/TRCF domain TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Pfam PF03461 TRCF domain 1007 1097 1.5E-22 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Pfam PF02559 CarD-like/TRCF domain 481 576 8.4E-27 T 13-10-2018 IPR003711 CarD-like/TRCF domain TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SUPERFAMILY SSF141259 474 549 1.24E-20 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SUPERFAMILY SSF52540 21 359 3.4E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Pfam PF00270 DEAD/DEAH box helicase 609 765 9.2E-18 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Gene3D G3DSA:2.30.30.840 484 542 4.7E-233 T 13-10-2018 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SMART SM00490 824 911 1.9E-16 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Gene3D G3DSA:3.90.1150.50 1000 1144 1.2E-29 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SMART SM00982 1004 1104 1.3E-30 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 Pfam PF00271 Helicase conserved C-terminal domain 808 910 1.4E-15 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1911 7ae55bf586a1d781fe2743a346dfa279 1145 SUPERFAMILY SSF52540 783 990 2.3E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1235 51cb818c67400dcead754efa56645fd4 295 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 293 1.7E-74 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1235 51cb818c67400dcead754efa56645fd4 295 Gene3D G3DSA:1.10.287.80 7 289 2.1E-79 T 13-10-2018 TREPR_1235 51cb818c67400dcead754efa56645fd4 295 SUPERFAMILY SSF52943 2 293 4.84E-69 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1235 51cb818c67400dcead754efa56645fd4 295 Gene3D G3DSA:3.40.1380.10 61 212 2.1E-79 T 13-10-2018 TREPR_1235 51cb818c67400dcead754efa56645fd4 295 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 8.9E-30 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1235 51cb818c67400dcead754efa56645fd4 295 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 8.9E-30 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1235 51cb818c67400dcead754efa56645fd4 295 PRINTS PR00126 ATP synthase gamma subunit signature 271 292 8.9E-30 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1235 51cb818c67400dcead754efa56645fd4 295 PRINTS PR00126 ATP synthase gamma subunit signature 240 259 8.9E-30 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1235 51cb818c67400dcead754efa56645fd4 295 Pfam PF00231 ATP synthase 3 293 2.7E-77 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1235 51cb818c67400dcead754efa56645fd4 295 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 293 29.413 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_2627 44d90601c215996ba0c93e2e7c90aad8 285 Pfam PF08543 Phosphomethylpyrimidine kinase 93 241 6.4E-13 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 TREPR_2627 44d90601c215996ba0c93e2e7c90aad8 285 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 3 283 2.2E-96 T 13-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 TREPR_2627 44d90601c215996ba0c93e2e7c90aad8 285 Gene3D G3DSA:3.40.1190.20 1 285 2.2E-85 T 13-10-2018 IPR029056 Ribokinase-like TREPR_2627 44d90601c215996ba0c93e2e7c90aad8 285 SUPERFAMILY SSF53613 3 276 2.18E-63 T 13-10-2018 IPR029056 Ribokinase-like TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 SMART SM00279 205 240 5.4E-12 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Gene3D G3DSA:1.20.1060.10 620 733 3.3E-36 T 13-10-2018 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Gene3D G3DSA:3.30.70.370 739 999 4.4E-112 T 13-10-2018 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 SMART SM00482 761 967 2.9E-111 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 203 297 5.8E-27 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 PRINTS PR00868 DNA-polymerase family A (pol I) signature 805 818 7.7E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 PRINTS PR00868 DNA-polymerase family A (pol I) signature 775 798 7.7E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 PRINTS PR00868 DNA-polymerase family A (pol I) signature 920 936 7.7E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 752 7.7E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 768 7.7E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 PRINTS PR00868 DNA-polymerase family A (pol I) signature 888 899 7.7E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 PRINTS PR00868 DNA-polymerase family A (pol I) signature 950 963 7.7E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 PRINTS PR00868 DNA-polymerase family A (pol I) signature 829 854 7.7E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 PRINTS PR00868 DNA-polymerase family A (pol I) signature 866 877 7.7E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Gene3D G3DSA:3.30.420.10 402 618 7.0E-57 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 SUPERFAMILY SSF53098 404 596 1.0E-34 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 SUPERFAMILY SSF88723 2 169 8.34E-45 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 SMART SM00474 404 595 4.9E-21 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Gene3D G3DSA:3.40.50.1010 5 289 5.2E-84 T 13-10-2018 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Pfam PF00476 DNA polymerase family A 628 1001 7.3E-150 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 166 2.9E-45 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 SUPERFAMILY SSF56672 601 1003 5.11E-148 T 13-10-2018 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 ProSitePatterns PS00447 DNA polymerase family A signature. 829 848 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 SUPERFAMILY SSF47807 203 313 5.98E-25 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Gene3D G3DSA:1.10.150.20 206 278 5.2E-84 T 13-10-2018 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 SMART SM00475 1 292 5.0E-105 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 TIGRFAM TIGR00593 pola: DNA polymerase I 483 1003 1.2E-199 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Gene3D G3DSA:1.10.150.20 784 927 4.4E-112 T 13-10-2018 TREPR_3060 661c517958ce527a02ad6a75250c36ca 1003 Pfam PF01612 3'-5' exonuclease 404 594 5.7E-22 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TREPR_0677 9c6cac4247b47086333911d12f265bb2 418 SUPERFAMILY SSF102114 148 366 3.27E-19 T 13-10-2018 TREPR_0677 9c6cac4247b47086333911d12f265bb2 418 Gene3D G3DSA:3.20.20.70 141 322 6.7E-15 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0210 f5738d46cced103b55f1ee9475c96609 320 Pfam PF16363 GDP-mannose 4,6 dehydratase 14 311 2.0E-52 T 13-10-2018 IPR016040 NAD(P)-binding domain TREPR_0210 f5738d46cced103b55f1ee9475c96609 320 SUPERFAMILY SSF51735 11 317 1.04E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0210 f5738d46cced103b55f1ee9475c96609 320 Gene3D G3DSA:3.40.50.720 9 138 2.7E-40 T 13-10-2018 TREPR_0210 f5738d46cced103b55f1ee9475c96609 320 Gene3D G3DSA:3.40.50.720 139 320 1.7E-62 T 13-10-2018 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 Gene3D G3DSA:3.40.50.150 269 447 2.5E-25 T 13-10-2018 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 Pfam PF01584 CheW-like domain 28 163 4.4E-33 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 SUPERFAMILY SSF53335 268 430 1.93E-21 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 SMART SM00138 216 446 4.5E-10 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 Pfam PF01739 CheR methyltransferase, SAM binding domain 268 431 8.1E-36 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 PRINTS PR00996 Glutamate methyltransferase family signature 387 401 1.2E-9 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 PRINTS PR00996 Glutamate methyltransferase family signature 406 429 1.2E-9 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 PRINTS PR00996 Glutamate methyltransferase family signature 293 313 1.2E-9 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 Gene3D G3DSA:2.40.50.180 44 160 2.4E-35 T 13-10-2018 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 SMART SM00260 23 161 2.0E-41 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 SUPERFAMILY SSF50341 26 163 4.71E-32 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TREPR_2971 e94f2cdb5193c68584daf37f9f7b95f7 448 Gene3D G3DSA:2.30.30.40 29 155 2.4E-35 T 13-10-2018 TREPR_0964 7b51c4cadcdefc7e063ac41f85476fff 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 239 5.5E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0964 7b51c4cadcdefc7e063ac41f85476fff 270 Gene3D G3DSA:1.10.3720.10 26 240 2.9E-50 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0964 7b51c4cadcdefc7e063ac41f85476fff 270 SUPERFAMILY SSF161098 36 228 5.76E-43 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0964 7b51c4cadcdefc7e063ac41f85476fff 270 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 35 132 2.4E-29 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TREPR_1783 0693709cbd4db5047f2ae2a1d7868a9c 377 Gene3D G3DSA:3.90.230.10 139 377 7.4E-59 T 13-10-2018 TREPR_1783 0693709cbd4db5047f2ae2a1d7868a9c 377 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 140 9.6E-17 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TREPR_1783 0693709cbd4db5047f2ae2a1d7868a9c 377 Gene3D G3DSA:3.40.350.10 7 138 1.0E-22 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_1783 0693709cbd4db5047f2ae2a1d7868a9c 377 SUPERFAMILY SSF55920 139 375 1.83E-57 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like TREPR_1783 0693709cbd4db5047f2ae2a1d7868a9c 377 SUPERFAMILY SSF53092 3 135 1.74E-19 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_1783 0693709cbd4db5047f2ae2a1d7868a9c 377 Pfam PF00557 Metallopeptidase family M24 150 359 3.2E-40 T 13-10-2018 IPR000994 Peptidase M24 TREPR_1543 92f9c9eb06c93772e8f4caf1581bf064 53 SUPERFAMILY SSF57802 3 52 4.54E-22 T 13-10-2018 TREPR_1543 92f9c9eb06c93772e8f4caf1581bf064 53 PIRSF PIRSF000071 1 53 7.4E-27 T 13-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 TREPR_1543 92f9c9eb06c93772e8f4caf1581bf064 53 PRINTS PR00163 Rubredoxin signature 4 20 4.3E-13 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 TREPR_1543 92f9c9eb06c93772e8f4caf1581bf064 53 PRINTS PR00163 Rubredoxin signature 34 50 4.3E-13 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 TREPR_1543 92f9c9eb06c93772e8f4caf1581bf064 53 Pfam PF00301 Rubredoxin 4 50 2.9E-24 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 TREPR_1543 92f9c9eb06c93772e8f4caf1581bf064 53 ProSitePatterns PS00202 Rubredoxin signature. 34 44 - T 13-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 TREPR_1543 92f9c9eb06c93772e8f4caf1581bf064 53 Gene3D G3DSA:2.20.28.10 2 53 4.9E-26 T 13-10-2018 TREPR_2993 8644d638db0715af28155fe7979ab893 324 Gene3D G3DSA:3.30.360.10 147 322 4.2E-45 T 13-10-2018 TREPR_2993 8644d638db0715af28155fe7979ab893 324 SUPERFAMILY SSF51735 2 150 1.42E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2993 8644d638db0715af28155fe7979ab893 324 SUPERFAMILY SSF55347 125 287 2.29E-32 T 13-10-2018 TREPR_2993 8644d638db0715af28155fe7979ab893 324 Gene3D G3DSA:3.40.50.720 1 146 1.6E-38 T 13-10-2018 TREPR_2993 8644d638db0715af28155fe7979ab893 324 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 117 7.9E-22 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TREPR_3035 51907b290ba2ed0b2cfba7847bb04c3a 355 Gene3D G3DSA:3.40.190.10 137 259 1.5E-64 T 13-10-2018 TREPR_3035 51907b290ba2ed0b2cfba7847bb04c3a 355 PIRSF PIRSF002825 1 349 6.5E-52 T 13-10-2018 IPR026045 Ferric binding protein TREPR_3035 51907b290ba2ed0b2cfba7847bb04c3a 355 Gene3D G3DSA:3.40.190.10 41 312 1.5E-64 T 13-10-2018 TREPR_3035 51907b290ba2ed0b2cfba7847bb04c3a 355 SUPERFAMILY SSF53850 37 347 2.22E-55 T 13-10-2018 TREPR_3035 51907b290ba2ed0b2cfba7847bb04c3a 355 Pfam PF13343 Bacterial extracellular solute-binding protein 85 310 1.3E-27 T 13-10-2018 TREPR_1338 97a2d162f6fc854b061793bd5617152c 541 SUPERFAMILY SSF53474 44 524 3.04E-80 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1338 97a2d162f6fc854b061793bd5617152c 541 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 223 238 - T 13-10-2018 IPR019826 Carboxylesterase type B, active site TREPR_1338 97a2d162f6fc854b061793bd5617152c 541 Pfam PF00135 Carboxylesterase family 44 514 2.5E-74 T 13-10-2018 IPR002018 Carboxylesterase, type B TREPR_1338 97a2d162f6fc854b061793bd5617152c 541 Gene3D G3DSA:3.40.50.1820 38 540 7.5E-117 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_3763 4e858308af5ffcd3bf97b64a9e76d488 165 Gene3D G3DSA:1.10.260.40 4 108 1.3E-22 T 13-10-2018 TREPR_3763 4e858308af5ffcd3bf97b64a9e76d488 165 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 79 4.4E-19 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TREPR_3763 4e858308af5ffcd3bf97b64a9e76d488 165 Pfam PF01381 Helix-turn-helix 12 66 1.1E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3763 4e858308af5ffcd3bf97b64a9e76d488 165 SUPERFAMILY SSF47413 8 80 7.88E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3763 4e858308af5ffcd3bf97b64a9e76d488 165 SMART SM00530 11 66 1.2E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 81 99 2.1E-27 T 13-10-2018 IPR002220 DapA-like GO:0016829 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 137 154 2.1E-27 T 13-10-2018 IPR002220 DapA-like GO:0016829 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 45 66 2.1E-27 T 13-10-2018 IPR002220 DapA-like GO:0016829 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 113 129 2.1E-27 T 13-10-2018 IPR002220 DapA-like GO:0016829 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 PIRSF PIRSF001365 8 309 3.2E-86 T 13-10-2018 IPR002220 DapA-like GO:0016829 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 SUPERFAMILY SSF51569 10 305 2.93E-94 T 13-10-2018 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 15 300 2.5E-91 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 Gene3D G3DSA:3.20.20.70 2 306 1.2E-103 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 Pfam PF00701 Dihydrodipicolinate synthetase family 12 292 1.6E-85 T 13-10-2018 IPR002220 DapA-like GO:0016829 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 11 303 59.066 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TREPR_2976 9302c6abfd9aaf7f0a6db8ed502ad6c8 310 SMART SM01130 11 305 1.8E-124 T 13-10-2018 IPR002220 DapA-like GO:0016829 TREPR_1718 90e6b1b998ac7541476e6ce081386b1c 328 Pfam PF13181 Tetratricopeptide repeat 142 171 1.0E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1718 90e6b1b998ac7541476e6ce081386b1c 328 SUPERFAMILY SSF48452 14 205 1.14E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1718 90e6b1b998ac7541476e6ce081386b1c 328 Gene3D G3DSA:1.25.40.10 11 217 2.1E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1718 90e6b1b998ac7541476e6ce081386b1c 328 SMART SM00028 14 47 80.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1718 90e6b1b998ac7541476e6ce081386b1c 328 SMART SM00028 173 206 430.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1718 90e6b1b998ac7541476e6ce081386b1c 328 SMART SM00028 139 172 0.0069 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3693 61f755f4016504368813cb082f049b0e 470 SUPERFAMILY SSF116734 55 204 3.92E-16 T 13-10-2018 TREPR_3693 61f755f4016504368813cb082f049b0e 470 Gene3D G3DSA:3.90.220.20 283 460 6.1E-26 T 13-10-2018 TREPR_3693 61f755f4016504368813cb082f049b0e 470 Pfam PF01420 Type I restriction modification DNA specificity domain 301 435 7.1E-5 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TREPR_3693 61f755f4016504368813cb082f049b0e 470 SUPERFAMILY SSF116734 290 454 1.16E-17 T 13-10-2018 TREPR_3693 61f755f4016504368813cb082f049b0e 470 Gene3D G3DSA:3.90.220.20 42 195 9.5E-22 T 13-10-2018 TREPR_3757 4cdb8d52619f24f1b1b71ff607bc99f1 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TREPR_3757 4cdb8d52619f24f1b1b71ff607bc99f1 317 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TREPR_3757 4cdb8d52619f24f1b1b71ff607bc99f1 317 Gene3D G3DSA:3.40.1190.20 1 315 6.5E-74 T 13-10-2018 IPR029056 Ribokinase-like TREPR_3757 4cdb8d52619f24f1b1b71ff607bc99f1 317 SUPERFAMILY SSF53613 1 300 2.65E-56 T 13-10-2018 IPR029056 Ribokinase-like TREPR_3757 4cdb8d52619f24f1b1b71ff607bc99f1 317 Pfam PF00294 pfkB family carbohydrate kinase 2 292 6.7E-49 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB TREPR_0690 18cd0e7c57884ca28a4f961da9b000ec 410 Gene3D G3DSA:2.40.10.220 294 395 3.6E-6 T 13-10-2018 TREPR_0690 18cd0e7c57884ca28a4f961da9b000ec 410 Pfam PF07238 PilZ domain 309 394 1.4E-10 T 13-10-2018 IPR009875 PilZ domain GO:0035438 TREPR_0690 18cd0e7c57884ca28a4f961da9b000ec 410 SUPERFAMILY SSF141371 313 393 3.14E-5 T 13-10-2018 TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 6.5E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.5E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 6.5E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.5E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 6.5E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 6.5E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 Gene3D G3DSA:3.40.50.720 3 257 7.1E-82 T 13-10-2018 TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 SUPERFAMILY SSF51735 7 257 7.71E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0656 8f06da19eaf70839bb2ef4789892944e 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 255 2.9E-70 T 13-10-2018 TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 Gene3D G3DSA:3.40.50.80 101 226 8.0E-21 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 TIGRFAM TIGR02911 sulfite_red_B: sulfite reductase, subunit B 4 264 7.0E-122 T 13-10-2018 IPR014260 Sulphite reductase, subunit B TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 SUPERFAMILY SSF52343 90 257 2.23E-30 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 Gene3D G3DSA:2.40.30.10 7 94 1.9E-8 T 13-10-2018 TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 227 256 1.7E-7 T 13-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 PIRSF PIRSF006816 5 262 2.5E-70 T 13-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 Pfam PF00175 Oxidoreductase NAD-binding domain 108 208 7.2E-15 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 SUPERFAMILY SSF63380 7 95 6.81E-16 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 PRINTS PR00406 Cytochrome B5 reductase signature 82 96 1.8E-9 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 PRINTS PR00406 Cytochrome B5 reductase signature 195 203 1.8E-9 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 PRINTS PR00406 Cytochrome B5 reductase signature 106 125 1.8E-9 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 TREPR_1702 b36100c6495ecc5359eb4745df370a52 264 PRINTS PR00406 Cytochrome B5 reductase signature 144 155 1.8E-9 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 TREPR_3022 2e11b144ff196e85412995cb09915917 484 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 24 476 3.5E-87 T 13-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 TREPR_3022 2e11b144ff196e85412995cb09915917 484 SUPERFAMILY SSF53187 20 479 4.0E-54 T 13-10-2018 TREPR_3022 2e11b144ff196e85412995cb09915917 484 SUPERFAMILY SSF55031 199 383 3.84E-32 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_3022 2e11b144ff196e85412995cb09915917 484 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 95 104 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TREPR_3022 2e11b144ff196e85412995cb09915917 484 Gene3D G3DSA:3.30.70.360 213 300 9.8E-127 T 13-10-2018 TREPR_3022 2e11b144ff196e85412995cb09915917 484 Gene3D G3DSA:3.40.630.10 24 479 9.8E-127 T 13-10-2018 TREPR_3022 2e11b144ff196e85412995cb09915917 484 Gene3D G3DSA:3.30.70.360 199 388 9.8E-127 T 13-10-2018 TREPR_3022 2e11b144ff196e85412995cb09915917 484 Pfam PF01546 Peptidase family M20/M25/M40 98 477 7.2E-31 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_1758 29246bce719cd8f9df54ae13c39ea2d2 323 SUPERFAMILY SSF55120 10 216 8.2E-67 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1758 29246bce719cd8f9df54ae13c39ea2d2 323 Gene3D G3DSA:3.30.2350.10 1 230 1.2E-79 T 13-10-2018 TREPR_1758 29246bce719cd8f9df54ae13c39ea2d2 323 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 178 6.8E-48 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 TREPR_1758 29246bce719cd8f9df54ae13c39ea2d2 323 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 213 9.1E-70 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1758 29246bce719cd8f9df54ae13c39ea2d2 323 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 310 16.308 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_2701 d4e0c3efcfa3f095b297b4e375f85bb8 355 Pfam PF07728 AAA domain (dynein-related subfamily) 22 151 8.0E-11 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TREPR_2701 d4e0c3efcfa3f095b297b4e375f85bb8 355 Gene3D G3DSA:3.40.50.300 7 162 1.1E-19 T 13-10-2018 TREPR_2701 d4e0c3efcfa3f095b297b4e375f85bb8 355 SUPERFAMILY SSF52540 20 184 2.47E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 Gene3D G3DSA:2.70.150.20 206 317 1.4E-27 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 SUPERFAMILY SSF81665 164 715 1.96E-11 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 653 8.3E-24 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 617 636 8.3E-24 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 263 277 8.3E-24 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 571 8.3E-24 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 415 429 8.3E-24 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 549 8.3E-24 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 Pfam PF00122 E1-E2 ATPase 214 394 2.0E-43 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00941 Cadmium-transporting ATPase signature 198 218 1.4E-11 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00941 Cadmium-transporting ATPase signature 298 312 1.4E-11 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00941 Cadmium-transporting ATPase signature 279 295 1.4E-11 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 PRINTS PR00941 Cadmium-transporting ATPase signature 16 37 1.4E-11 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 SUPERFAMILY SSF56784 413 717 1.08E-57 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 Gene3D G3DSA:3.30.70.100 1 64 6.9E-7 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 Gene3D G3DSA:3.40.1110.10 426 545 7.9E-80 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 SUPERFAMILY SSF81653 216 313 2.48E-21 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 Pfam PF00702 haloacid dehalogenase-like hydrolase 411 631 8.9E-30 T 13-10-2018 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 185 696 1.2E-66 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 Pfam PF00403 Heavy-metal-associated domain 5 64 7.1E-7 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 417 423 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 164 719 3.6E-165 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 SUPERFAMILY SSF55008 1 55 4.71E-9 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TREPR_2948 439660a54344d8e0071b7fdc79805c12 728 Gene3D G3DSA:3.40.50.1000 396 670 7.9E-80 T 13-10-2018 IPR023214 HAD superfamily TREPR_3711 e98c031d035b5826fac8f210c3e8c8c8 455 SUPERFAMILY SSF47781 346 422 1.37E-10 T 13-10-2018 IPR010994 RuvA domain 2-like TREPR_3711 e98c031d035b5826fac8f210c3e8c8c8 455 SUPERFAMILY SSF102114 58 213 1.19E-13 T 13-10-2018 TREPR_3711 e98c031d035b5826fac8f210c3e8c8c8 455 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 9 444 2.4E-154 T 13-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative TREPR_3711 e98c031d035b5826fac8f210c3e8c8c8 455 Gene3D G3DSA:1.10.150.320 352 415 2.9E-5 T 13-10-2018 TREPR_3711 e98c031d035b5826fac8f210c3e8c8c8 455 Gene3D G3DSA:3.20.20.70 67 214 5.2E-7 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3156 5335914b95f2defc8da7eefc65024846 274 Gene3D G3DSA:1.10.1270.20 181 258 1.4E-25 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TREPR_3156 5335914b95f2defc8da7eefc65024846 274 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 229 5.3E-60 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TREPR_3156 5335914b95f2defc8da7eefc65024846 274 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 8.6E-89 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TREPR_3156 5335914b95f2defc8da7eefc65024846 274 SUPERFAMILY SSF75217 2 235 3.53E-86 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases TREPR_3156 5335914b95f2defc8da7eefc65024846 274 Gene3D G3DSA:3.40.1280.10 1 180 2.3E-63 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TREPR_3156 5335914b95f2defc8da7eefc65024846 274 PIRSF PIRSF000386 1 259 1.9E-87 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TREPR_3156 5335914b95f2defc8da7eefc65024846 274 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 274 96.601 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TREPR_0831 b01afb0bfe63058ad03fa7e12314ffd9 387 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 364 6.6E-103 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_0831 b01afb0bfe63058ad03fa7e12314ffd9 387 Pfam PF01546 Peptidase family M20/M25/M40 69 371 2.2E-27 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_0831 b01afb0bfe63058ad03fa7e12314ffd9 387 PIRSF PIRSF005962 2 379 1.2E-106 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_0831 b01afb0bfe63058ad03fa7e12314ffd9 387 Gene3D G3DSA:3.30.70.360 177 291 1.5E-118 T 13-10-2018 TREPR_0831 b01afb0bfe63058ad03fa7e12314ffd9 387 Gene3D G3DSA:3.40.630.10 15 361 1.5E-118 T 13-10-2018 TREPR_0831 b01afb0bfe63058ad03fa7e12314ffd9 387 SUPERFAMILY SSF55031 181 287 2.62E-30 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_0831 b01afb0bfe63058ad03fa7e12314ffd9 387 Pfam PF07687 Peptidase dimerisation domain 182 274 6.1E-10 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain TREPR_0831 b01afb0bfe63058ad03fa7e12314ffd9 387 SUPERFAMILY SSF53187 10 375 2.42E-73 T 13-10-2018 TREPR_3274 86cc528af3675a33b1f24b7c4360f415 174 PIRSF PIRSF006578 1 107 4.8E-46 T 13-10-2018 IPR026328 Formylmethanofuran dehydrogenase, subunit E TREPR_3274 86cc528af3675a33b1f24b7c4360f415 174 PIRSF PIRSF006578 97 173 2.7E-19 T 13-10-2018 IPR026328 Formylmethanofuran dehydrogenase, subunit E TREPR_3274 86cc528af3675a33b1f24b7c4360f415 174 Gene3D G3DSA:3.30.1330.130 1 128 5.9E-43 T 13-10-2018 TREPR_3274 86cc528af3675a33b1f24b7c4360f415 174 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 12 121 1.5E-34 T 13-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain TREPR_3274 86cc528af3675a33b1f24b7c4360f415 174 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 137 170 5.3E-8 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TREPR_3274 86cc528af3675a33b1f24b7c4360f415 174 SUPERFAMILY SSF143555 4 136 2.62E-44 T 13-10-2018 TREPR_1759 4254bf957a2e2db3417ef562f92959c3 262 Gene3D G3DSA:3.40.50.620 19 190 2.2E-46 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1759 4254bf957a2e2db3417ef562f92959c3 262 Pfam PF06574 FAD synthetase 23 170 1.6E-35 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TREPR_1759 4254bf957a2e2db3417ef562f92959c3 262 SUPERFAMILY SSF52374 25 178 3.38E-20 T 13-10-2018 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 Pfam PF00009 Elongation factor Tu GTP binding domain 12 203 3.7E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 Gene3D G3DSA:2.40.30.10 303 395 5.6E-39 T 13-10-2018 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 152 8.6E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 Gene3D G3DSA:2.40.30.10 210 302 1.3E-37 T 13-10-2018 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 Gene3D G3DSA:3.40.50.300 1 205 2.7E-66 T 13-10-2018 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 57.179 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 SUPERFAMILY SSF50465 300 395 1.3E-33 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 SUPERFAMILY SSF52540 9 228 2.61E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.3E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.3E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.3E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.3E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 SUPERFAMILY SSF50447 207 303 4.91E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 2.2E-16 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 7.6E-206 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TREPR_1475 925673aaf8ab7bdf01496280a6d70341 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 6.6E-30 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TREPR_0560 77eb3f6e8776e4be3647d133f733631f 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 251 2.0E-47 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TREPR_0560 77eb3f6e8776e4be3647d133f733631f 323 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 319 4.5E-108 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 TREPR_0560 77eb3f6e8776e4be3647d133f733631f 323 SUPERFAMILY SSF51735 2 320 3.4E-83 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0560 77eb3f6e8776e4be3647d133f733631f 323 Gene3D G3DSA:3.40.50.720 3 251 3.1E-110 T 13-10-2018 TREPR_0560 77eb3f6e8776e4be3647d133f733631f 323 Gene3D G3DSA:3.90.25.10 172 305 3.1E-110 T 13-10-2018 TREPR_1569 3d336b509c441b7495b72580c060c95e 457 Pfam PF01554 MatE 30 190 2.4E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1569 3d336b509c441b7495b72580c060c95e 457 Pfam PF01554 MatE 255 415 7.2E-19 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1569 3d336b509c441b7495b72580c060c95e 457 PIRSF PIRSF006603 6 456 8.3E-99 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1569 3d336b509c441b7495b72580c060c95e 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 427 3.7E-61 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3387 b60f9327f01a7ee281683cc8f194b629 407 SUPERFAMILY SSF53448 53 309 8.34E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3387 b60f9327f01a7ee281683cc8f194b629 407 Pfam PF00535 Glycosyl transferase family 2 60 192 4.1E-26 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_3387 b60f9327f01a7ee281683cc8f194b629 407 Gene3D G3DSA:3.90.550.10 41 292 1.1E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3585 e0efb25132d7431199878f7c0627c91e 84 Gene3D G3DSA:2.10.260.10 1 41 2.1E-14 T 13-10-2018 TREPR_3585 e0efb25132d7431199878f7c0627c91e 84 SMART SM00966 4 47 2.2E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_3585 e0efb25132d7431199878f7c0627c91e 84 SUPERFAMILY SSF89447 1 43 3.31E-12 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily TREPR_3585 e0efb25132d7431199878f7c0627c91e 84 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 38 8.4E-9 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_3585 e0efb25132d7431199878f7c0627c91e 84 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 38 2.2E-13 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 445 2.0E-29 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 SUPERFAMILY SSF158494 445 566 1.11E-15 T 13-10-2018 IPR036797 Acyl-CoA dehydrogenase, C-terminal domain superfamily TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 64 171 1.7E-15 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 Gene3D G3DSA:2.40.110.10 175 284 1.9E-23 T 13-10-2018 TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 Gene3D G3DSA:1.10.540.10 23 172 8.3E-20 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 Gene3D G3DSA:1.20.120.470 448 573 5.7E-17 T 13-10-2018 IPR036797 Acyl-CoA dehydrogenase, C-terminal domain superfamily TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 SUPERFAMILY SSF47203 284 450 3.22E-42 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 Gene3D G3DSA:1.20.140.10 285 447 3.0E-47 T 13-10-2018 TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 175 269 4.0E-21 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 SUPERFAMILY SSF56645 49 276 2.23E-45 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 Pfam PF12186 Acyl-CoA dehydrogenase C terminal 458 559 1.2E-12 T 13-10-2018 IPR020964 Acyl-CoA dehydrogenase, C-terminal TREPR_1267 e377b4748bd5b4100e33efe64dcd18fd 578 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 412 431 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 Gene3D G3DSA:2.30.250.10 110 247 1.8E-120 T 13-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 433 448 8.0E-25 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 168 185 8.0E-25 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 99 115 8.0E-25 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 132 152 8.0E-25 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 293 311 8.0E-25 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 339 355 8.0E-25 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 SUPERFAMILY SSF53187 15 467 1.19E-83 T 13-10-2018 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 SUPERFAMILY SSF101821 111 242 1.19E-24 T 13-10-2018 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 38 466 5.4E-70 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 TREPR_0829 cf966e46eb0d4e9aaee427975cbdf3e4 469 Gene3D G3DSA:3.40.630.10 49 457 1.8E-120 T 13-10-2018 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 PRINTS PR00151 Porphobilinogen deaminase signature 234 251 1.1E-15 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 PRINTS PR00151 Porphobilinogen deaminase signature 149 166 1.1E-15 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.1E-15 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 Gene3D G3DSA:3.40.190.10 5 215 3.0E-63 T 13-10-2018 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 284 4.5E-70 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 Gene3D G3DSA:3.30.160.40 228 318 1.7E-9 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 231 272 1.1E-8 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 Gene3D G3DSA:3.40.190.10 101 208 3.0E-63 T 13-10-2018 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 SUPERFAMILY SSF53850 3 216 4.56E-55 T 13-10-2018 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 215 1.4E-58 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 SUPERFAMILY SSF54782 226 315 6.54E-12 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0260 b0e69c1dff8039dfb0446ef922e3e075 333 PIRSF PIRSF001438 2 323 1.9E-77 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0887 449c46b109cec86f78bfd4c5bea5b561 131 Gene3D G3DSA:2.40.50.140 1 123 9.4E-32 T 13-10-2018 TREPR_0887 449c46b109cec86f78bfd4c5bea5b561 131 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 118 1.4E-25 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TREPR_0887 449c46b109cec86f78bfd4c5bea5b561 131 Pfam PF00436 Single-strand binding protein family 4 105 3.8E-27 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TREPR_0887 449c46b109cec86f78bfd4c5bea5b561 131 Hamap MF_00984 Single-stranded DNA-binding protein. 4 110 23.994 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TREPR_0887 449c46b109cec86f78bfd4c5bea5b561 131 PIRSF PIRSF002070 1 129 3.0E-26 T 13-10-2018 TREPR_0887 449c46b109cec86f78bfd4c5bea5b561 131 SUPERFAMILY SSF50249 4 126 4.8E-31 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_3623 a1c56db01eb1980cb559921a85937c3e 330 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 240 306 1.3E-5 T 13-10-2018 IPR001357 BRCT domain TREPR_3623 a1c56db01eb1980cb559921a85937c3e 330 SUPERFAMILY SSF53098 38 262 9.58E-59 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_3623 a1c56db01eb1980cb559921a85937c3e 330 Pfam PF00929 Exonuclease 40 194 3.8E-39 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TREPR_3623 a1c56db01eb1980cb559921a85937c3e 330 SUPERFAMILY SSF52113 240 328 3.18E-9 T 13-10-2018 IPR036420 BRCT domain superfamily TREPR_3623 a1c56db01eb1980cb559921a85937c3e 330 SMART SM00479 38 205 1.0E-45 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TREPR_3623 a1c56db01eb1980cb559921a85937c3e 330 Gene3D G3DSA:3.40.50.10190 223 329 2.7E-18 T 13-10-2018 IPR036420 BRCT domain superfamily TREPR_3623 a1c56db01eb1980cb559921a85937c3e 330 Gene3D G3DSA:3.30.420.10 34 207 1.3E-55 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_3623 a1c56db01eb1980cb559921a85937c3e 330 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 37 215 8.6E-32 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_3356 732495f84390b367f56dc01c42792043 128 Pfam PF01850 PIN domain 6 118 1.1E-8 T 13-10-2018 IPR002716 PIN domain TREPR_3356 732495f84390b367f56dc01c42792043 128 Gene3D G3DSA:3.40.50.1010 5 128 2.9E-19 T 13-10-2018 TREPR_3356 732495f84390b367f56dc01c42792043 128 SUPERFAMILY SSF88723 5 126 3.92E-22 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_0993 2a68c4b76c6f965722b33ea6712a90da 448 Gene3D G3DSA:3.90.1150.10 291 448 1.4E-19 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0993 2a68c4b76c6f965722b33ea6712a90da 448 Pfam PF00155 Aminotransferase class I and II 54 434 2.4E-32 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TREPR_0993 2a68c4b76c6f965722b33ea6712a90da 448 SUPERFAMILY SSF53383 33 445 4.21E-55 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0993 2a68c4b76c6f965722b33ea6712a90da 448 Gene3D G3DSA:3.40.640.10 49 290 1.2E-38 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3442 4e10345a1d79ae58ba551ab7dcb9d117 256 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 49 253 2.2E-42 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase TREPR_3442 4e10345a1d79ae58ba551ab7dcb9d117 256 SUPERFAMILY SSF64438 53 254 1.61E-51 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic TREPR_3442 4e10345a1d79ae58ba551ab7dcb9d117 256 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 53 252 7.8E-44 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase TREPR_3442 4e10345a1d79ae58ba551ab7dcb9d117 256 Gene3D G3DSA:3.60.140.10 38 255 4.5E-55 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily TREPR_2450 064ead194af2f17a04306cea6dd12e4e 447 Gene3D G3DSA:1.10.580.10 63 417 4.2E-103 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TREPR_2450 064ead194af2f17a04306cea6dd12e4e 447 Gene3D G3DSA:1.10.230.10 274 392 4.2E-103 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain TREPR_2450 064ead194af2f17a04306cea6dd12e4e 447 SUPERFAMILY SSF48256 4 434 1.7E-88 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 TREPR_2450 064ead194af2f17a04306cea6dd12e4e 447 PRINTS PR00143 Citrate synthase signature 398 412 2.2E-31 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 TREPR_2450 064ead194af2f17a04306cea6dd12e4e 447 PRINTS PR00143 Citrate synthase signature 169 182 2.2E-31 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 TREPR_2450 064ead194af2f17a04306cea6dd12e4e 447 PRINTS PR00143 Citrate synthase signature 225 240 2.2E-31 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 TREPR_2450 064ead194af2f17a04306cea6dd12e4e 447 PRINTS PR00143 Citrate synthase signature 378 394 2.2E-31 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 TREPR_2450 064ead194af2f17a04306cea6dd12e4e 447 PRINTS PR00143 Citrate synthase signature 248 276 2.2E-31 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 TREPR_2450 064ead194af2f17a04306cea6dd12e4e 447 Pfam PF00285 Citrate synthase, C-terminal domain 38 429 1.2E-109 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 TREPR_2140 7b3fa08c42ca87c74e3b15ac8315362b 403 Pfam PF04055 Radical SAM superfamily 149 300 9.7E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_2140 7b3fa08c42ca87c74e3b15ac8315362b 403 SUPERFAMILY SSF102114 143 356 2.22E-20 T 13-10-2018 TREPR_2140 7b3fa08c42ca87c74e3b15ac8315362b 403 Gene3D G3DSA:3.20.20.70 136 357 1.4E-15 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0928 837fa0930c45624ff72b19c521402a3f 183 SUPERFAMILY SSF160369 8 177 1.12E-46 T 13-10-2018 TREPR_0928 837fa0930c45624ff72b19c521402a3f 183 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 6 149 3.0E-5 T 13-10-2018 TREPR_0928 837fa0930c45624ff72b19c521402a3f 183 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 7 166 23.565 T 13-10-2018 IPR022973 Ribosomal protein L10 TREPR_0928 837fa0930c45624ff72b19c521402a3f 183 ProSitePatterns PS01109 Ribosomal protein L10 signature. 12 46 - T 13-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_0928 837fa0930c45624ff72b19c521402a3f 183 Pfam PF00466 Ribosomal protein L10 9 104 8.5E-24 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 TREPR_0928 837fa0930c45624ff72b19c521402a3f 183 Gene3D G3DSA:3.30.70.1730 4 177 7.9E-35 T 13-10-2018 TREPR_3185 709f93fd87f9cfb3238ca708ff94470a 281 Pfam PF00950 ABC 3 transport family 13 271 6.0E-56 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TREPR_3185 709f93fd87f9cfb3238ca708ff94470a 281 Gene3D G3DSA:1.10.3470.10 41 277 4.8E-8 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_3185 709f93fd87f9cfb3238ca708ff94470a 281 SUPERFAMILY SSF81345 12 270 1.31E-30 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_0381 c4e111e14b7b04d770465e7de3db9648 186 Pfam PF10080 Predicted membrane protein (DUF2318) 80 182 9.0E-29 T 13-10-2018 IPR018758 Domain of unknown function DUF2318, membrane TREPR_3318 e8e37f65d69c854ebd39c6cb0af8cfc2 424 Pfam PF03600 Citrate transporter 23 371 6.0E-31 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 TREPR_3615 5add6e86d976d73d61d752df40c876ec 445 SUPERFAMILY SSF56954 5 432 5.89E-57 T 13-10-2018 TREPR_3615 5add6e86d976d73d61d752df40c876ec 445 Pfam PF02321 Outer membrane efflux protein 244 430 1.5E-17 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TREPR_3615 5add6e86d976d73d61d752df40c876ec 445 Pfam PF02321 Outer membrane efflux protein 31 213 2.0E-22 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TREPR_3615 5add6e86d976d73d61d752df40c876ec 445 Gene3D G3DSA:1.20.1600.10 20 436 9.9E-60 T 13-10-2018 TREPR_1392 a7a3c39ee8ae9dbc56a40627d48382cf 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 25 3.5E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site TREPR_1392 a7a3c39ee8ae9dbc56a40627d48382cf 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 28 7.3E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site TREPR_0595 c5bec8fdeb8a00d19aa00d9ba0d7085c 249 SMART SM00345 16 74 3.4E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_0595 c5bec8fdeb8a00d19aa00d9ba0d7085c 249 Pfam PF07729 FCD domain 88 207 3.9E-16 T 13-10-2018 IPR011711 GntR, C-terminal TREPR_0595 c5bec8fdeb8a00d19aa00d9ba0d7085c 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 72 2.0E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_0595 c5bec8fdeb8a00d19aa00d9ba0d7085c 249 SUPERFAMILY SSF46785 7 78 1.91E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0595 c5bec8fdeb8a00d19aa00d9ba0d7085c 249 SMART SM00895 84 208 6.1E-4 T 13-10-2018 IPR011711 GntR, C-terminal TREPR_0595 c5bec8fdeb8a00d19aa00d9ba0d7085c 249 SUPERFAMILY SSF48008 81 208 2.62E-17 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TREPR_0595 c5bec8fdeb8a00d19aa00d9ba0d7085c 249 Gene3D G3DSA:1.20.120.530 82 217 4.7E-15 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TREPR_0595 c5bec8fdeb8a00d19aa00d9ba0d7085c 249 Gene3D G3DSA:1.10.10.10 9 75 2.2E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1843 27e545f890beda7a48997b84f891db9f 210 Pfam PF13181 Tetratricopeptide repeat 128 152 0.09 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1843 27e545f890beda7a48997b84f891db9f 210 Pfam PF13181 Tetratricopeptide repeat 163 192 0.088 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1843 27e545f890beda7a48997b84f891db9f 210 Gene3D G3DSA:1.25.40.10 14 208 4.1E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1843 27e545f890beda7a48997b84f891db9f 210 SUPERFAMILY SSF48452 31 201 7.59E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1843 27e545f890beda7a48997b84f891db9f 210 SMART SM00028 160 193 0.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1843 27e545f890beda7a48997b84f891db9f 210 SMART SM00028 126 159 53.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1518 4eba0d4e93c3e549ca9821bee90bac5b 305 SUPERFAMILY SSF46689 197 247 3.23E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_1518 4eba0d4e93c3e549ca9821bee90bac5b 305 SUPERFAMILY SSF46689 249 300 8.51E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_1518 4eba0d4e93c3e549ca9821bee90bac5b 305 Pfam PF02311 AraC-like ligand binding domain 56 175 2.9E-10 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TREPR_1518 4eba0d4e93c3e549ca9821bee90bac5b 305 Gene3D G3DSA:1.10.10.60 195 246 6.0E-16 T 13-10-2018 TREPR_1518 4eba0d4e93c3e549ca9821bee90bac5b 305 Gene3D G3DSA:1.10.10.60 247 305 1.4E-18 T 13-10-2018 TREPR_1518 4eba0d4e93c3e549ca9821bee90bac5b 305 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TREPR_1518 4eba0d4e93c3e549ca9821bee90bac5b 305 SUPERFAMILY SSF51215 36 185 3.53E-19 T 13-10-2018 IPR037923 Transcription regulator HTH-like TREPR_1518 4eba0d4e93c3e549ca9821bee90bac5b 305 SMART SM00342 213 296 1.5E-31 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_1518 4eba0d4e93c3e549ca9821bee90bac5b 305 Pfam PF12833 Helix-turn-helix domain 219 297 5.2E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_1680 c9784fb8db52edc933f8e39b67ea0795 138 SUPERFAMILY SSF50630 29 118 1.43E-8 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily TREPR_1680 c9784fb8db52edc933f8e39b67ea0795 138 Pfam PF13650 Aspartyl protease 32 79 3.1E-6 T 13-10-2018 TREPR_1680 c9784fb8db52edc933f8e39b67ea0795 138 Gene3D G3DSA:2.40.70.10 27 131 4.0E-8 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily TREPR_1768 d78442dd2fdb965f9b395f75d0707560 293 Gene3D G3DSA:1.20.120.140 16 287 3.9E-84 T 13-10-2018 TREPR_1768 d78442dd2fdb965f9b395f75d0707560 293 SMART SM00382 88 293 1.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1768 d78442dd2fdb965f9b395f75d0707560 293 SMART SM00962 89 291 2.2E-99 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TREPR_1768 d78442dd2fdb965f9b395f75d0707560 293 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 20 288 2.1E-85 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TREPR_1768 d78442dd2fdb965f9b395f75d0707560 293 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 19 291 53.035 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TREPR_1768 d78442dd2fdb965f9b395f75d0707560 293 SUPERFAMILY SSF52540 90 291 3.69E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1768 d78442dd2fdb965f9b395f75d0707560 293 Gene3D G3DSA:3.40.50.300 87 279 3.9E-84 T 13-10-2018 TREPR_1768 d78442dd2fdb965f9b395f75d0707560 293 Pfam PF00448 SRP54-type protein, GTPase domain 90 289 3.0E-69 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TREPR_1768 d78442dd2fdb965f9b395f75d0707560 293 SUPERFAMILY SSF47364 4 68 2.49E-7 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 297 2.6E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 SUPERFAMILY SSF52172 594 714 1.71E-33 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 SMART SM00388 232 297 9.0E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 8.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 8.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 8.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 Gene3D G3DSA:3.40.50.2300 589 713 1.3E-35 T 13-10-2018 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 Pfam PF01627 Hpt domain 760 837 2.8E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 SUPERFAMILY SSF47384 220 298 2.94E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 Gene3D G3DSA:1.20.120.160 738 849 2.1E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 SMART SM00387 344 459 1.1E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 Gene3D G3DSA:1.10.287.130 214 295 4.2E-25 T 13-10-2018 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 Pfam PF00072 Response regulator receiver domain 596 709 3.1E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 457 3.6E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 SUPERFAMILY SSF55874 286 459 4.06E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 SMART SM00448 594 709 3.1E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 Gene3D G3DSA:3.30.565.10 296 461 1.0E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1258 932f272fc7c93a697ec7dfecd31d82a5 930 SUPERFAMILY SSF47226 692 838 7.46E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 Pfam PF00694 Aconitase C-terminal domain 637 692 4.8E-6 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 SUPERFAMILY SSF52016 517 761 7.85E-35 T 13-10-2018 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 Pfam PF00330 Aconitase family (aconitate hydratase) 50 479 5.7E-78 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 PRINTS PR00415 Aconitase family signature 225 238 7.2E-6 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 PRINTS PR00415 Aconitase family signature 306 320 7.2E-6 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 PRINTS PR00415 Aconitase family signature 422 435 7.2E-6 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 PRINTS PR00415 Aconitase family signature 149 162 7.2E-6 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 Gene3D G3DSA:3.40.1060.10 194 306 1.8E-19 T 13-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 Gene3D G3DSA:3.30.499.10 347 492 6.0E-28 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 SUPERFAMILY SSF53732 42 495 2.09E-107 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TREPR_3317 ea930730a633e925a6acb50f02efe21a 764 Gene3D G3DSA:3.30.499.10 29 193 1.6E-21 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 Pfam PF02602 Uroporphyrinogen-III synthase HemD 289 513 2.4E-48 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 SUPERFAMILY SSF53790 1 238 1.07E-66 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 Gene3D G3DSA:3.40.50.10090 398 517 1.4E-17 T 13-10-2018 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 238 1.8E-85 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 Gene3D G3DSA:3.30.950.10 119 260 6.9E-36 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 SUPERFAMILY SSF69618 274 519 1.7E-51 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 213 1.0E-43 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 Gene3D G3DSA:3.40.1010.10 1 118 5.3E-41 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 Gene3D G3DSA:3.40.50.10090 274 397 2.9E-20 T 13-10-2018 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 PIRSF PIRSF036426 358 405 830.0 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TREPR_0261 5b1b6523c6812c3537512b1f44d4b9e8 526 PIRSF PIRSF036426 1 256 2.0E-89 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 PIRSF PIRSF000534 1 440 3.6E-188 T 13-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 Gene3D G3DSA:3.40.50.450 73 266 5.3E-56 T 13-10-2018 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 168 184 2.2E-27 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 219 237 2.2E-27 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 201 218 2.2E-27 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 297 309 2.2E-27 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 81 100 2.2E-27 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 256 2.2E-27 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 107 120 2.2E-27 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 Pfam PF00365 Phosphofructokinase 80 383 1.2E-64 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 SUPERFAMILY SSF53784 33 437 1.11E-113 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TREPR_0608 7c17f09f34c34ffdf57fee7e8361e5ca 452 Hamap MF_01981 ATP-dependent 6-phosphofructokinase [pfkA]. 5 436 51.858 T 13-10-2018 IPR012004 Pyrophosphate-dependent phosphofructokinase TP0108-type GO:0003872|GO:0005524|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 TREPR_2326 0e1224b7a2d9ae40dc7fdc6016e3f58f 296 Pfam PF04085 rod shape-determining protein MreC 127 280 6.2E-38 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TREPR_2326 0e1224b7a2d9ae40dc7fdc6016e3f58f 296 Gene3D G3DSA:2.40.10.350 188 268 5.4E-38 T 13-10-2018 TREPR_2326 0e1224b7a2d9ae40dc7fdc6016e3f58f 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 44 285 1.8E-45 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TREPR_2326 0e1224b7a2d9ae40dc7fdc6016e3f58f 296 PIRSF PIRSF038471 6 293 7.5E-47 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TREPR_2326 0e1224b7a2d9ae40dc7fdc6016e3f58f 296 Gene3D G3DSA:2.40.10.340 125 279 5.4E-38 T 13-10-2018 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 Gene3D G3DSA:3.50.40.10 97 294 5.9E-51 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 SUPERFAMILY SSF55681 395 584 7.46E-34 T 13-10-2018 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 TIGRFAM TIGR00471 pheT_arch: phenylalanine--tRNA ligase, beta subunit 1 584 6.0E-146 T 13-10-2018 IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 SMART SM00874 301 379 1.2E-8 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 Gene3D G3DSA:3.30.56.10 304 377 9.5E-10 T 13-10-2018 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 Gene3D G3DSA:3.30.56.10 1 87 1.9E-14 T 13-10-2018 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 SMART SM00873 115 275 0.0033 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 Pfam PF03484 tRNA synthetase B5 domain 306 375 2.6E-10 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 Gene3D G3DSA:3.30.930.10 396 584 7.5E-37 T 13-10-2018 TREPR_0483 23dffa6ce300cc454ae8bde0e0c6b484 585 SUPERFAMILY SSF46955 304 377 2.56E-7 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily TREPR_1741 fc6486a1e4f7b89d71797671601be028 366 Gene3D G3DSA:3.90.230.10 138 365 1.9E-71 T 13-10-2018 TREPR_1741 fc6486a1e4f7b89d71797671601be028 366 Pfam PF00557 Metallopeptidase family M24 148 348 6.2E-55 T 13-10-2018 IPR000994 Peptidase M24 TREPR_1741 fc6486a1e4f7b89d71797671601be028 366 Gene3D G3DSA:3.40.350.10 3 135 2.1E-26 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_1741 fc6486a1e4f7b89d71797671601be028 366 SUPERFAMILY SSF53092 5 138 6.45E-19 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_1741 fc6486a1e4f7b89d71797671601be028 366 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 296 308 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site TREPR_1741 fc6486a1e4f7b89d71797671601be028 366 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 140 5.3E-17 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TREPR_1741 fc6486a1e4f7b89d71797671601be028 366 SUPERFAMILY SSF55920 139 365 3.53E-68 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like TREPR_3000 b16f2bab49becf197a8b117b88f9ea2b 508 Gene3D G3DSA:3.40.50.300 2 243 2.6E-53 T 13-10-2018 TREPR_3000 b16f2bab49becf197a8b117b88f9ea2b 508 Gene3D G3DSA:3.40.50.300 244 506 5.8E-45 T 13-10-2018 TREPR_3000 b16f2bab49becf197a8b117b88f9ea2b 508 Pfam PF00005 ABC transporter 281 437 1.1E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3000 b16f2bab49becf197a8b117b88f9ea2b 508 SUPERFAMILY SSF52540 248 498 8.45E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3000 b16f2bab49becf197a8b117b88f9ea2b 508 Pfam PF00005 ABC transporter 21 172 2.5E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3000 b16f2bab49becf197a8b117b88f9ea2b 508 SMART SM00382 289 486 3.1E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3000 b16f2bab49becf197a8b117b88f9ea2b 508 SMART SM00382 30 220 1.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3000 b16f2bab49becf197a8b117b88f9ea2b 508 SUPERFAMILY SSF52540 4 226 1.36E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3000 b16f2bab49becf197a8b117b88f9ea2b 508 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 SUPERFAMILY SSF53067 303 564 3.18E-31 T 13-10-2018 TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 Gene3D G3DSA:3.30.420.40 4 253 6.8E-45 T 13-10-2018 TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 SUPERFAMILY SSF53067 4 253 3.34E-16 T 13-10-2018 TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 303 563 7.5E-40 T 13-10-2018 IPR008275 CoA enzyme activase TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 709 921 3.4E-48 T 13-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 Gene3D G3DSA:3.30.420.40 305 564 6.0E-76 T 13-10-2018 TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 253 5.7E-18 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 305 564 5.1E-33 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 Gene3D G3DSA:3.30.420.40 405 547 6.0E-76 T 13-10-2018 TREPR_3604 b6e1f195740b8ef62e5e6bfe3b412502 1519 Gene3D G3DSA:3.30.420.40 94 238 6.8E-45 T 13-10-2018 TREPR_0659 2603c779fe09870ca3e8d3a39e66098c 354 SMART SM00382 32 215 3.3E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0659 2603c779fe09870ca3e8d3a39e66098c 354 Gene3D G3DSA:2.40.50.940 226 284 2.0E-7 T 13-10-2018 TREPR_0659 2603c779fe09870ca3e8d3a39e66098c 354 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0659 2603c779fe09870ca3e8d3a39e66098c 354 Pfam PF08402 TOBE domain 279 351 1.8E-6 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TREPR_0659 2603c779fe09870ca3e8d3a39e66098c 354 SUPERFAMILY SSF50331 241 351 3.17E-8 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_0659 2603c779fe09870ca3e8d3a39e66098c 354 SUPERFAMILY SSF52540 7 244 3.45E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0659 2603c779fe09870ca3e8d3a39e66098c 354 Pfam PF00005 ABC transporter 24 165 2.1E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0659 2603c779fe09870ca3e8d3a39e66098c 354 Gene3D G3DSA:3.40.50.300 8 225 5.1E-65 T 13-10-2018 TREPR_0659 2603c779fe09870ca3e8d3a39e66098c 354 Gene3D G3DSA:2.40.50.140 285 326 2.0E-7 T 13-10-2018 TREPR_1329 f750146daa531ac947a8d3787599e8f3 740 Gene3D G3DSA:3.40.50.1700 488 726 4.9E-17 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TREPR_1329 f750146daa531ac947a8d3787599e8f3 740 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 499 724 5.8E-17 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 TREPR_1329 f750146daa531ac947a8d3787599e8f3 740 SUPERFAMILY SSF52279 499 722 2.22E-13 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TREPR_1329 f750146daa531ac947a8d3787599e8f3 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 367 385 1.5E-8 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TREPR_1329 f750146daa531ac947a8d3787599e8f3 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 189 208 1.5E-8 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TREPR_1329 f750146daa531ac947a8d3787599e8f3 740 PRINTS PR00133 Glycosyl hydrolase family 3 signature 279 295 1.5E-8 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TREPR_1329 f750146daa531ac947a8d3787599e8f3 740 Gene3D G3DSA:3.20.20.300 48 482 2.2E-78 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TREPR_1329 f750146daa531ac947a8d3787599e8f3 740 SUPERFAMILY SSF51445 51 498 1.26E-65 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_1329 f750146daa531ac947a8d3787599e8f3 740 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 120 421 1.1E-32 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TREPR_1076 42d7c385e7914923a6f59a82d279dec7 114 SUPERFAMILY SSF54197 1 113 3.97E-38 T 13-10-2018 IPR036265 HIT-like superfamily TREPR_1076 42d7c385e7914923a6f59a82d279dec7 114 Gene3D G3DSA:3.30.428.10 1 114 3.5E-40 T 13-10-2018 IPR036265 HIT-like superfamily TREPR_1076 42d7c385e7914923a6f59a82d279dec7 114 Pfam PF01230 HIT domain 12 108 7.9E-26 T 13-10-2018 IPR001310 Histidine triad (HIT) protein TREPR_1076 42d7c385e7914923a6f59a82d279dec7 114 PRINTS PR00332 Histidine triad family signature 5 21 1.1E-20 T 13-10-2018 IPR001310 Histidine triad (HIT) protein TREPR_1076 42d7c385e7914923a6f59a82d279dec7 114 PRINTS PR00332 Histidine triad family signature 26 44 1.1E-20 T 13-10-2018 IPR001310 Histidine triad (HIT) protein TREPR_1076 42d7c385e7914923a6f59a82d279dec7 114 PRINTS PR00332 Histidine triad family signature 94 104 1.1E-20 T 13-10-2018 IPR001310 Histidine triad (HIT) protein TREPR_1076 42d7c385e7914923a6f59a82d279dec7 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 13-10-2018 IPR019808 Histidine triad, conserved site TREPR_3319 2a9f2fda5759cff3d38e50e4c70cdec4 502 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 34 378 1.9E-47 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA TREPR_3319 2a9f2fda5759cff3d38e50e4c70cdec4 502 SMART SM00854 34 380 1.9E-33 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA TREPR_3319 2a9f2fda5759cff3d38e50e4c70cdec4 502 SUPERFAMILY SSF56300 34 380 1.71E-20 T 13-10-2018 TREPR_2806 8119fb569427bd1db1b2d9561d700dfb 203 Pfam PF01351 Ribonuclease HII 3 190 6.8E-30 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain TREPR_2806 8119fb569427bd1db1b2d9561d700dfb 203 Hamap MF_00052_B Ribonuclease HII [rnhB]. 1 192 31.634 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 TREPR_2806 8119fb569427bd1db1b2d9561d700dfb 203 SUPERFAMILY SSF53098 2 196 1.52E-59 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_2806 8119fb569427bd1db1b2d9561d700dfb 203 Gene3D G3DSA:3.30.420.10 1 200 1.9E-65 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_3343 cfcf90b86a94bdb719c0e0928a5396e3 252 SUPERFAMILY SSF52540 1 238 5.62E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3343 cfcf90b86a94bdb719c0e0928a5396e3 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3343 cfcf90b86a94bdb719c0e0928a5396e3 252 SMART SM00382 26 216 1.4E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3343 cfcf90b86a94bdb719c0e0928a5396e3 252 Gene3D G3DSA:3.40.50.300 1 250 2.8E-75 T 13-10-2018 TREPR_3343 cfcf90b86a94bdb719c0e0928a5396e3 252 PIRSF PIRSF039085 1 244 1.8E-98 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TREPR_3343 cfcf90b86a94bdb719c0e0928a5396e3 252 Pfam PF00005 ABC transporter 17 168 4.1E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 ProSitePatterns PS00905 GTP1/OBG family signature. 222 235 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 Pfam PF01926 50S ribosome-binding GTPase 163 285 6.5E-20 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 Pfam PF01018 GTP1/OBG 7 159 1.2E-54 T 13-10-2018 IPR006169 GTP1/OBG domain TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 220 235 1.7E-30 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 237 255 1.7E-30 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 164 184 1.7E-30 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 185 203 1.7E-30 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 Gene3D G3DSA:3.40.50.300 161 339 2.3E-42 T 13-10-2018 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 SUPERFAMILY SSF82051 4 159 1.96E-50 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 5 331 4.6E-121 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 Gene3D G3DSA:2.70.210.12 2 160 1.1E-51 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 SUPERFAMILY SSF52540 152 330 4.98E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 Hamap MF_01454 GTPase Obg [obg]. 4 335 43.795 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TREPR_3451 ce22814bcec4976d82d0f6f9857ea4a6 349 PIRSF PIRSF002401 2 348 1.2E-122 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type TREPR_2529 c427375ac3107a1f8b2a23586981074b 138 Pfam PF13650 Aspartyl protease 30 83 8.3E-8 T 13-10-2018 TREPR_2529 c427375ac3107a1f8b2a23586981074b 138 Gene3D G3DSA:2.40.70.10 19 129 4.4E-11 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily TREPR_2529 c427375ac3107a1f8b2a23586981074b 138 SUPERFAMILY SSF50630 25 118 3.0E-8 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily TREPR_0708 7d40110ad02e063834e02d768a270eed 255 SUPERFAMILY SSF102215 1 248 6.93E-51 T 13-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TREPR_0708 7d40110ad02e063834e02d768a270eed 255 Pfam PF02633 Creatinine amidohydrolase 5 245 2.1E-56 T 13-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TREPR_0708 7d40110ad02e063834e02d768a270eed 255 Gene3D G3DSA:3.40.50.10310 1 251 4.5E-58 T 13-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TREPR_2940 6b5c9fe241688b6253c266487a61d07a 546 SUPERFAMILY SSF56281 291 497 1.76E-28 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2940 6b5c9fe241688b6253c266487a61d07a 546 Gene3D G3DSA:3.60.15.10 312 503 6.4E-28 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2940 6b5c9fe241688b6253c266487a61d07a 546 Pfam PF00753 Metallo-beta-lactamase superfamily 319 485 1.3E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2940 6b5c9fe241688b6253c266487a61d07a 546 Pfam PF00756 Putative esterase 80 219 3.4E-5 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 TREPR_2940 6b5c9fe241688b6253c266487a61d07a 546 SMART SM00849 315 485 1.0E-18 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2940 6b5c9fe241688b6253c266487a61d07a 546 Gene3D G3DSA:3.40.50.1820 54 283 2.7E-44 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_2940 6b5c9fe241688b6253c266487a61d07a 546 SUPERFAMILY SSF53474 77 247 7.77E-20 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_3458 0cb292095b8036113538dad2c1a8c6dc 525 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 521 3.6E-158 T 13-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 TREPR_3458 0cb292095b8036113538dad2c1a8c6dc 525 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 37 465 4.3E-81 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TREPR_3458 0cb292095b8036113538dad2c1a8c6dc 525 Gene3D G3DSA:1.20.1730.10 25 524 7.6E-83 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily TREPR_3458 0cb292095b8036113538dad2c1a8c6dc 525 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 447 467 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site TREPR_3458 0cb292095b8036113538dad2c1a8c6dc 525 Pfam PF00474 Sodium:solute symporter family 37 465 2.7E-86 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Pfam PF14335 Domain of unknown function (DUF4391) 9 193 3.0E-18 T 13-10-2018 IPR025503 Protein of unknown function DUF4391 TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00671 617 648 1.0 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00671 649 680 3.4E-5 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00671 538 573 0.038 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00671 331 366 360.0 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00671 502 537 5.2E-7 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00671 581 616 0.0083 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00671 681 716 4.0E-5 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00671 409 442 2.1E-5 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00671 466 501 2.3 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Gene3D G3DSA:1.25.40.10 328 465 4.1E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00028 409 444 7.9 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SMART SM00028 649 682 25.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Gene3D G3DSA:1.25.40.10 571 717 2.5E-39 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Gene3D G3DSA:1.25.40.10 466 570 3.4E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SUPERFAMILY SSF81901 483 714 1.05E-48 T 13-10-2018 TREPR_1290 4da889ea3001a7db7647156695b3999b 717 SUPERFAMILY SSF81901 344 455 6.28E-13 T 13-10-2018 TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Pfam PF08238 Sel1 repeat 479 501 0.089 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Pfam PF08238 Sel1 repeat 619 648 0.063 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Pfam PF08238 Sel1 repeat 682 713 6.0E-6 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Pfam PF08238 Sel1 repeat 409 442 0.003 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Pfam PF08238 Sel1 repeat 581 601 0.035 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Pfam PF08238 Sel1 repeat 538 570 0.0088 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Pfam PF08238 Sel1 repeat 503 535 4.1E-6 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_1290 4da889ea3001a7db7647156695b3999b 717 Pfam PF08238 Sel1 repeat 649 680 1.9E-4 T 13-10-2018 IPR006597 Sel1-like repeat TREPR_0700 1d81866dcb28e82be881c011e53a8fc8 347 Gene3D G3DSA:3.40.50.720 1 146 9.0E-30 T 13-10-2018 TREPR_0700 1d81866dcb28e82be881c011e53a8fc8 347 SUPERFAMILY SSF51735 3 165 6.68E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0700 1d81866dcb28e82be881c011e53a8fc8 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 126 4.2E-17 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TREPR_0700 1d81866dcb28e82be881c011e53a8fc8 347 Gene3D G3DSA:3.30.360.10 147 346 3.9E-9 T 13-10-2018 TREPR_0908 052e130d6d98f0c69b1bc69570c06513 62 Gene3D G3DSA:1.10.1660.10 1 54 1.4E-7 T 13-10-2018 TREPR_0908 052e130d6d98f0c69b1bc69570c06513 62 SUPERFAMILY SSF46955 5 55 1.88E-10 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily TREPR_0908 052e130d6d98f0c69b1bc69570c06513 62 Pfam PF12728 Helix-turn-helix domain 5 53 1.9E-16 T 13-10-2018 TREPR_0908 052e130d6d98f0c69b1bc69570c06513 62 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 4 51 1.8E-15 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 TREPR_1781 874f1f22a75c62837c215ac3cb4599cf 404 SUPERFAMILY SSF51556 53 403 1.09E-60 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_1781 874f1f22a75c62837c215ac3cb4599cf 404 Gene3D G3DSA:3.20.20.140 87 404 7.2E-82 T 13-10-2018 TREPR_1781 874f1f22a75c62837c215ac3cb4599cf 404 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 125 401 1.0E-66 T 13-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Gene3D G3DSA:1.10.10.10 428 504 4.2E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2321 a37f883dc86920e209f88b5543401d19 589 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 351 576 3.2E-37 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Pfam PF04545 Sigma-70, region 4 523 576 4.2E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 SUPERFAMILY SSF88659 485 588 1.2E-27 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Gene3D G3DSA:1.10.601.10 101 427 3.8E-79 T 13-10-2018 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 15 588 36.395 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 351 587 5.3E-120 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Pfam PF00140 Sigma-70 factor, region 1.2 103 134 6.2E-12 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 548 574 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Pfam PF04542 Sigma-70 region 2 355 424 5.1E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 SUPERFAMILY SSF88659 428 501 3.14E-19 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Gene3D G3DSA:1.10.220.120 17 75 9.3E-12 T 13-10-2018 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 379 392 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 SUPERFAMILY SSF88946 102 425 7.69E-55 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Pfam PF04539 Sigma-70 region 3 434 510 1.5E-26 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Gene3D G3DSA:1.10.10.10 505 589 1.6E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2321 a37f883dc86920e209f88b5543401d19 589 PRINTS PR00046 Major sigma-70 factor signature 548 563 1.0E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 PRINTS PR00046 Major sigma-70 factor signature 563 574 1.0E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 PRINTS PR00046 Major sigma-70 factor signature 527 539 1.0E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 PRINTS PR00046 Major sigma-70 factor signature 379 392 1.0E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 PRINTS PR00046 Major sigma-70 factor signature 403 411 1.0E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TREPR_2321 a37f883dc86920e209f88b5543401d19 589 Pfam PF03979 Sigma-70 factor, region 1.1 18 86 1.1E-13 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 TREPR_3149 c4b93f8a2a7dea6050d0446125329103 142 SUPERFAMILY SSF88723 1 131 3.6E-17 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_3149 c4b93f8a2a7dea6050d0446125329103 142 Pfam PF13470 PIN domain 3 117 2.0E-9 T 13-10-2018 IPR002716 PIN domain TREPR_3149 c4b93f8a2a7dea6050d0446125329103 142 Gene3D G3DSA:3.40.50.1010 3 139 1.9E-10 T 13-10-2018 TREPR_1669 12e8182d93f7da0411b3c6d0efc1f3b9 357 Gene3D G3DSA:3.40.50.1980 24 354 6.5E-75 T 13-10-2018 TREPR_1669 12e8182d93f7da0411b3c6d0efc1f3b9 357 Pfam PF01497 Periplasmic binding protein 54 294 1.5E-26 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain TREPR_1669 12e8182d93f7da0411b3c6d0efc1f3b9 357 SUPERFAMILY SSF53807 38 356 8.63E-62 T 13-10-2018 TREPR_2300 c5161b60b20a3e0c36f36313c4d4d4a8 223 SUPERFAMILY SSF52172 1 146 5.26E-22 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2300 c5161b60b20a3e0c36f36313c4d4d4a8 223 SMART SM00448 2 135 2.9E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2300 c5161b60b20a3e0c36f36313c4d4d4a8 223 Gene3D G3DSA:3.40.50.12740 2 219 4.4E-45 T 13-10-2018 TREPR_2300 c5161b60b20a3e0c36f36313c4d4d4a8 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 213 2.2E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2300 c5161b60b20a3e0c36f36313c4d4d4a8 223 Pfam PF00072 Response regulator receiver domain 79 135 8.6E-8 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2300 c5161b60b20a3e0c36f36313c4d4d4a8 223 Pfam PF00072 Response regulator receiver domain 4 55 9.3E-9 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2300 c5161b60b20a3e0c36f36313c4d4d4a8 223 SUPERFAMILY SSF46894 149 220 1.84E-11 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_2300 c5161b60b20a3e0c36f36313c4d4d4a8 223 SMART SM00421 156 213 7.3E-4 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_0795 e8faa906eb550e3942f4bad1e79dfe40 245 Gene3D G3DSA:3.40.50.300 3 242 1.5E-60 T 13-10-2018 TREPR_0795 e8faa906eb550e3942f4bad1e79dfe40 245 SUPERFAMILY SSF52540 3 234 2.13E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0795 e8faa906eb550e3942f4bad1e79dfe40 245 SMART SM00382 30 226 1.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0795 e8faa906eb550e3942f4bad1e79dfe40 245 Pfam PF00005 ABC transporter 22 170 6.7E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0030 1a24110f8829ab8950f94c6fec67a422 308 Gene3D G3DSA:3.40.50.150 132 206 1.5E-7 T 13-10-2018 TREPR_0030 1a24110f8829ab8950f94c6fec67a422 308 Gene3D G3DSA:3.40.50.150 207 284 2.8E-14 T 13-10-2018 TREPR_0030 1a24110f8829ab8950f94c6fec67a422 308 SUPERFAMILY SSF53335 57 275 1.62E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0030 1a24110f8829ab8950f94c6fec67a422 308 Pfam PF05050 Methyltransferase FkbM domain 198 273 2.1E-9 T 13-10-2018 IPR006342 Methyltransferase FkbM TREPR_2938 f181ef605ffe621a619b443c5f17f574 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 9.0E-99 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TREPR_2938 f181ef605ffe621a619b443c5f17f574 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.182 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TREPR_2938 f181ef605ffe621a619b443c5f17f574 246 Pfam PF01709 Transcriptional regulator 5 237 5.8E-91 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TREPR_2938 f181ef605ffe621a619b443c5f17f574 246 Gene3D G3DSA:1.10.10.200 1 81 1.0E-35 T 13-10-2018 IPR017856 Integrase-like, N-terminal TREPR_2938 f181ef605ffe621a619b443c5f17f574 246 SUPERFAMILY SSF75625 3 242 2.88E-90 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TREPR_2938 f181ef605ffe621a619b443c5f17f574 246 Gene3D G3DSA:3.30.70.980 130 205 1.1E-49 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TREPR_2938 f181ef605ffe621a619b443c5f17f574 246 Gene3D G3DSA:3.30.70.980 86 236 1.1E-49 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TREPR_3882 aeca4e0c69548f37960193e36135d916 297 SUPERFAMILY SSF103481 185 286 3.92E-16 T 13-10-2018 TREPR_3882 aeca4e0c69548f37960193e36135d916 297 Pfam PF00892 EamA-like transporter family 6 139 1.1E-18 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TREPR_3882 aeca4e0c69548f37960193e36135d916 297 Pfam PF00892 EamA-like transporter family 151 284 3.8E-23 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TREPR_3882 aeca4e0c69548f37960193e36135d916 297 SUPERFAMILY SSF103481 40 143 3.92E-8 T 13-10-2018 TREPR_0749 0c3924ff555730d569026e926738bd42 1119 Gene3D G3DSA:3.40.50.300 858 1106 1.5E-42 T 13-10-2018 TREPR_0749 0c3924ff555730d569026e926738bd42 1119 SUPERFAMILY SSF52540 571 1100 4.73E-110 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0749 0c3924ff555730d569026e926738bd42 1119 Gene3D G3DSA:1.10.10.160 676 768 7.1E-71 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily TREPR_0749 0c3924ff555730d569026e926738bd42 1119 Pfam PF13361 UvrD-like helicase C-terminal domain 1005 1075 2.0E-22 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TREPR_0749 0c3924ff555730d569026e926738bd42 1119 Pfam PF13245 AAA domain 578 834 1.1E-27 T 13-10-2018 TREPR_0749 0c3924ff555730d569026e926738bd42 1119 Gene3D G3DSA:3.40.50.300 576 849 7.1E-71 T 13-10-2018 TREPR_0749 0c3924ff555730d569026e926738bd42 1119 SUPERFAMILY SSF89550 2 263 1.39E-10 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TREPR_3759 3893a3d15215d1c0fed14204f16c9b5e 504 Pfam PF11230 Protein of unknown function (DUF3029) 20 504 1.1E-208 T 13-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted TREPR_3759 3893a3d15215d1c0fed14204f16c9b5e 504 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 10 504 1.1E-189 T 13-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted TREPR_3759 3893a3d15215d1c0fed14204f16c9b5e 504 SUPERFAMILY SSF51998 23 475 2.96E-62 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 394 531 1.5E-22 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 SUPERFAMILY SSF52540 339 636 4.83E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 Gene3D G3DSA:3.40.50.300 338 533 9.0E-65 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 TIGRFAM TIGR00763 lon: endopeptidase La 17 822 6.7E-258 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 SMART SM00464 15 227 1.5E-28 T 13-10-2018 IPR003111 Lon, substrate-binding domain TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 PIRSF PIRSF001174 5 826 2.2E-264 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 SUPERFAMILY SSF54211 647 822 1.4E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 16 226 1.3E-25 T 13-10-2018 IPR003111 Lon, substrate-binding domain TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 Gene3D G3DSA:3.30.230.10 645 828 3.7E-67 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 Gene3D G3DSA:2.30.130.40 5 139 1.1E-18 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 Hamap MF_01973 Lon protease [lon]. 16 823 58.042 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 622 821 6.7E-74 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 SMART SM00382 390 535 3.5E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 SUPERFAMILY SSF88697 15 226 8.2E-26 T 13-10-2018 IPR015947 PUA-like superfamily TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 777 795 8.9E-47 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 743 8.9E-47 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 754 773 8.9E-47 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 647 663 8.9E-47 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 398 417 8.9E-47 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 Gene3D G3DSA:1.10.8.60 534 636 2.2E-24 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 Gene3D G3DSA:1.20.58.1480 147 269 2.7E-30 T 13-10-2018 TREPR_2601 b7ad2bf23657cdca917260e2d70e4ed2 829 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 727 735 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 410 33.123 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PIRSF PIRSF000724 2 417 9.0E-123 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 Pfam PF00162 Phosphoglycerate kinase 8 399 7.8E-110 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 Gene3D G3DSA:3.40.50.1260 202 400 6.2E-122 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 SUPERFAMILY SSF53748 3 409 1.65E-109 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 5.8E-61 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PRINTS PR00477 Phosphoglycerate kinase family signature 386 403 5.8E-61 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PRINTS PR00477 Phosphoglycerate kinase family signature 153 175 5.8E-61 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PRINTS PR00477 Phosphoglycerate kinase family signature 363 374 5.8E-61 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 5.8E-61 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PRINTS PR00477 Phosphoglycerate kinase family signature 183 205 5.8E-61 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PRINTS PR00477 Phosphoglycerate kinase family signature 206 225 5.8E-61 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PRINTS PR00477 Phosphoglycerate kinase family signature 330 355 5.8E-61 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 5.8E-61 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0395 ac232c24e825c40c359afbce2841b2a4 418 Gene3D G3DSA:3.40.50.1260 12 407 6.2E-122 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 Gene3D G3DSA:3.40.50.970 392 618 1.0E-47 T 13-10-2018 TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 Gene3D G3DSA:3.40.50.1220 215 391 2.9E-36 T 13-10-2018 TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 421 580 2.2E-36 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 SUPERFAMILY SSF52467 211 385 5.86E-40 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 1.7E-35 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 SUPERFAMILY SSF52518 397 608 2.5E-51 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 SUPERFAMILY SSF52518 1 209 1.97E-34 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 219 353 4.3E-31 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 Gene3D G3DSA:3.40.50.970 1 211 7.0E-33 T 13-10-2018 TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 457 476 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TREPR_0397 258b2c2e70cb72b5750858ce5e7a361a 625 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 623 2.6E-273 T 13-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 TREPR_2348 7e3e913e73e161b9969493752db0d1c7 345 SUPERFAMILY SSF69917 36 327 1.26E-26 T 13-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 TREPR_2348 7e3e913e73e161b9969493752db0d1c7 345 Gene3D G3DSA:2.40.128.90 29 335 8.7E-32 T 13-10-2018 TREPR_2348 7e3e913e73e161b9969493752db0d1c7 345 Pfam PF01278 Omptin family 37 332 2.8E-85 T 13-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 TREPR_2795 d4005157219a15ea697c5e559f18eeb3 393 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 393 110.07 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 TREPR_2795 d4005157219a15ea697c5e559f18eeb3 393 Gene3D G3DSA:3.30.2130.30 2 176 6.1E-37 T 13-10-2018 TREPR_2795 d4005157219a15ea697c5e559f18eeb3 393 Gene3D G3DSA:3.40.50.620 177 388 2.1E-60 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2795 d4005157219a15ea697c5e559f18eeb3 393 SUPERFAMILY SSF52402 176 367 3.53E-40 T 13-10-2018 TREPR_2795 d4005157219a15ea697c5e559f18eeb3 393 SMART SM00981 81 167 7.3E-8 T 13-10-2018 IPR004114 THUMP domain GO:0003723 TREPR_2795 d4005157219a15ea697c5e559f18eeb3 393 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 177 372 1.1E-68 T 13-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 TREPR_2795 d4005157219a15ea697c5e559f18eeb3 393 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 10 367 7.4E-92 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 TREPR_2795 d4005157219a15ea697c5e559f18eeb3 393 SUPERFAMILY SSF143437 8 175 4.71E-31 T 13-10-2018 TREPR_2795 d4005157219a15ea697c5e559f18eeb3 393 Pfam PF02926 THUMP domain 52 164 1.7E-9 T 13-10-2018 IPR004114 THUMP domain GO:0003723 TREPR_0523 83d17ce3abbf5b540ad7c7a79a8b1270 243 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 4 240 1.3E-90 T 13-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 TREPR_0523 83d17ce3abbf5b540ad7c7a79a8b1270 243 Gene3D G3DSA:3.40.1010.10 1 111 6.6E-27 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TREPR_0523 83d17ce3abbf5b540ad7c7a79a8b1270 243 SUPERFAMILY SSF53790 1 242 1.44E-52 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TREPR_0523 83d17ce3abbf5b540ad7c7a79a8b1270 243 Gene3D G3DSA:3.30.950.10 112 242 1.7E-51 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TREPR_0523 83d17ce3abbf5b540ad7c7a79a8b1270 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 209 1.0E-35 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TREPR_2624 9e59d3f3c2332df0eb0a667ef87674bf 235 Pfam PF13424 Tetratricopeptide repeat 59 121 5.9E-10 T 13-10-2018 TREPR_2624 9e59d3f3c2332df0eb0a667ef87674bf 235 Gene3D G3DSA:1.25.40.10 91 220 1.0E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2624 9e59d3f3c2332df0eb0a667ef87674bf 235 SUPERFAMILY SSF48452 28 157 3.98E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2624 9e59d3f3c2332df0eb0a667ef87674bf 235 SMART SM00028 23 56 14.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2624 9e59d3f3c2332df0eb0a667ef87674bf 235 SMART SM00028 57 90 0.0063 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2624 9e59d3f3c2332df0eb0a667ef87674bf 235 SMART SM00028 92 125 1.8E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2624 9e59d3f3c2332df0eb0a667ef87674bf 235 SMART SM00028 126 159 15.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2624 9e59d3f3c2332df0eb0a667ef87674bf 235 Gene3D G3DSA:1.25.40.10 20 90 4.5E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 Gene3D G3DSA:1.25.40.10 1 285 2.3E-62 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 Pfam PF14559 Tetratricopeptide repeat 190 247 4.5E-6 T 13-10-2018 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 Pfam PF13432 Tetratricopeptide repeat 46 105 0.0036 T 13-10-2018 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 Pfam PF13432 Tetratricopeptide repeat 113 173 2.0E-10 T 13-10-2018 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 SUPERFAMILY SSF48452 3 250 7.94E-44 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 SMART SM00028 6 39 0.67 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 SMART SM00028 210 243 0.13 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 SMART SM00028 74 107 40.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 SMART SM00028 108 141 0.76 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 SMART SM00028 142 175 1.8E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 SMART SM00028 40 73 5.0E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 SMART SM00028 244 277 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1103 179bd458d0704abdbb274c2fdc9f990a 521 SMART SM00028 176 209 16.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3066 7ec50270e9ff79a98d4635112dd15b24 314 Pfam PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit 16 246 3.2E-33 T 13-10-2018 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel TREPR_3066 7ec50270e9ff79a98d4635112dd15b24 314 Gene3D G3DSA:3.20.20.20 15 314 1.3E-94 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3066 7ec50270e9ff79a98d4635112dd15b24 314 SUPERFAMILY SSF51717 73 231 2.51E-7 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3507 487e62cb7135078c1356b1fd6c775672 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 216 9.2E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3507 487e62cb7135078c1356b1fd6c775672 222 Gene3D G3DSA:1.10.3720.10 8 219 3.4E-46 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3507 487e62cb7135078c1356b1fd6c775672 222 SUPERFAMILY SSF161098 13 204 5.1E-43 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1406 f471494ef21647e5feb64d1ad7671e5c 99 SUPERFAMILY SSF47413 9 83 1.19E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1406 f471494ef21647e5feb64d1ad7671e5c 99 Pfam PF01381 Helix-turn-helix 18 65 3.6E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1406 f471494ef21647e5feb64d1ad7671e5c 99 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 83 3.8E-26 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TREPR_1406 f471494ef21647e5feb64d1ad7671e5c 99 Gene3D G3DSA:1.10.260.40 1 84 7.7E-27 T 13-10-2018 TREPR_1406 f471494ef21647e5feb64d1ad7671e5c 99 SMART SM00530 14 69 1.9E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2619 89e2200fbcbb312ba7551b18206d19ad 87 Gene3D G3DSA:3.30.2310.20 3 85 1.4E-27 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_2619 89e2200fbcbb312ba7551b18206d19ad 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 6 85 8.4E-26 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TREPR_2619 89e2200fbcbb312ba7551b18206d19ad 87 SUPERFAMILY SSF143011 4 84 1.83E-15 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_2619 89e2200fbcbb312ba7551b18206d19ad 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 6 85 2.0E-19 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TREPR_1466 07eac5a39669753ea73b7b9c20078a68 297 Gene3D G3DSA:1.10.3720.10 10 276 6.6E-46 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1466 07eac5a39669753ea73b7b9c20078a68 297 SUPERFAMILY SSF161098 13 266 2.15E-50 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1466 07eac5a39669753ea73b7b9c20078a68 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 268 6.3E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0207 f792e04a30b0ce82aa8150c97eb152f0 273 SUPERFAMILY SSF53335 67 237 5.79E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0207 f792e04a30b0ce82aa8150c97eb152f0 273 Pfam PF05050 Methyltransferase FkbM domain 90 236 7.0E-16 T 13-10-2018 IPR006342 Methyltransferase FkbM TREPR_0207 f792e04a30b0ce82aa8150c97eb152f0 273 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 87 232 6.6E-29 T 13-10-2018 IPR006342 Methyltransferase FkbM TREPR_0207 f792e04a30b0ce82aa8150c97eb152f0 273 Gene3D G3DSA:3.40.50.150 74 258 1.1E-31 T 13-10-2018 TREPR_0998 f31db0c2a47e79f161141f4529964327 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 18 49 3.0E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0998 f31db0c2a47e79f161141f4529964327 70 Gene3D G3DSA:1.20.5.1150 19 65 2.4E-12 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0998 f31db0c2a47e79f161141f4529964327 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 6 62 4.0E-19 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0998 f31db0c2a47e79f161141f4529964327 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 4 60 16.417 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0998 f31db0c2a47e79f161141f4529964327 70 Pfam PF01165 Ribosomal protein S21 7 59 7.2E-17 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0998 f31db0c2a47e79f161141f4529964327 70 PRINTS PR00976 Ribosomal protein S21 family signature 40 50 6.9E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0998 f31db0c2a47e79f161141f4529964327 70 PRINTS PR00976 Ribosomal protein S21 family signature 8 16 6.9E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0998 f31db0c2a47e79f161141f4529964327 70 PRINTS PR00976 Ribosomal protein S21 family signature 16 25 6.9E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0998 f31db0c2a47e79f161141f4529964327 70 PRINTS PR00976 Ribosomal protein S21 family signature 28 38 6.9E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3499 cd161859339b84b1d9aaee2e5079f536 280 PIRSF PIRSF006816 30 272 1.6E-48 T 13-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 TREPR_3499 cd161859339b84b1d9aaee2e5079f536 280 Gene3D G3DSA:2.10.240.10 230 267 2.4E-14 T 13-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily TREPR_3499 cd161859339b84b1d9aaee2e5079f536 280 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 230 266 3.5E-15 T 13-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain TREPR_3499 cd161859339b84b1d9aaee2e5079f536 280 Gene3D G3DSA:3.40.50.80 127 222 7.5E-12 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TREPR_3499 cd161859339b84b1d9aaee2e5079f536 280 SUPERFAMILY SSF63380 51 124 1.45E-13 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TREPR_3499 cd161859339b84b1d9aaee2e5079f536 280 Gene3D G3DSA:2.40.30.10 30 122 4.3E-17 T 13-10-2018 TREPR_3499 cd161859339b84b1d9aaee2e5079f536 280 SUPERFAMILY SSF52343 119 266 1.02E-23 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 SUPERFAMILY SSF51735 3 192 2.05E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 Gene3D G3DSA:3.40.50.720 236 443 1.4E-72 T 13-10-2018 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 424 1.3E-135 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 Gene3D G3DSA:1.20.5.100 205 235 1.2E-17 T 13-10-2018 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 297 7.1E-37 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 SUPERFAMILY SSF48179 205 299 1.36E-32 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 SMART SM00984 323 428 1.5E-34 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 Gene3D G3DSA:3.40.50.720 1 201 7.8E-80 T 13-10-2018 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 PIRSF PIRSF000124 2 443 8.8E-145 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 SUPERFAMILY SSF52413 315 439 2.49E-33 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 PIRSF PIRSF500134 2 443 1.3E-177 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 188 7.7E-67 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TREPR_2367 690121ca26455a4d52a23543cc4611fb 443 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 427 5.7E-28 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TREPR_3402 64bf76a23108afe6254045e065cac45d 212 SUPERFAMILY SSF52242 69 207 2.22E-30 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_3402 64bf76a23108afe6254045e065cac45d 212 Pfam PF02607 B12 binding domain 7 76 1.3E-11 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3402 64bf76a23108afe6254045e065cac45d 212 SUPERFAMILY SSF47644 4 82 5.1E-13 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3402 64bf76a23108afe6254045e065cac45d 212 Gene3D G3DSA:3.40.50.280 82 211 8.3E-35 T 13-10-2018 TREPR_3402 64bf76a23108afe6254045e065cac45d 212 SMART SM01018 1 84 1.2E-10 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3402 64bf76a23108afe6254045e065cac45d 212 Gene3D G3DSA:1.10.1240.10 3 81 4.2E-17 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3402 64bf76a23108afe6254045e065cac45d 212 Pfam PF02310 B12 binding domain 91 197 8.9E-16 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_3207 9ae24af5840039a8cb995e7b1ddb2777 266 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 265 8.3E-102 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 TREPR_3207 9ae24af5840039a8cb995e7b1ddb2777 266 SUPERFAMILY SSF51366 1 265 4.84E-79 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TREPR_3207 9ae24af5840039a8cb995e7b1ddb2777 266 Pfam PF00977 Histidine biosynthesis protein 5 248 6.5E-81 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 TREPR_3207 9ae24af5840039a8cb995e7b1ddb2777 266 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 265 45.169 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 TREPR_3207 9ae24af5840039a8cb995e7b1ddb2777 266 Gene3D G3DSA:3.20.20.70 2 266 1.6E-98 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2347 1265137d30e438a993b3182a09bfea16 125 Pfam PF00293 NUDIX domain 8 119 7.3E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TREPR_2347 1265137d30e438a993b3182a09bfea16 125 Gene3D G3DSA:3.90.79.10 1 123 7.7E-26 T 13-10-2018 TREPR_2347 1265137d30e438a993b3182a09bfea16 125 PRINTS PR00502 NUDIX hydrolase family signature 26 40 5.3E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TREPR_2347 1265137d30e438a993b3182a09bfea16 125 PRINTS PR00502 NUDIX hydrolase family signature 40 55 5.3E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TREPR_2347 1265137d30e438a993b3182a09bfea16 125 SUPERFAMILY SSF55811 1 120 7.18E-25 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 Gene3D G3DSA:3.50.50.60 261 420 1.2E-33 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 Gene3D G3DSA:1.10.1060.10 8 142 2.4E-21 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 484 7.0E-168 T 13-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 126 1.2E-21 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 Gene3D G3DSA:3.40.50.720 143 228 4.2E-14 T 13-10-2018 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 5.7E-17 T 13-10-2018 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 5.7E-17 T 13-10-2018 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 PRINTS PR00419 Adrenodoxin reductase family signature 303 317 5.7E-17 T 13-10-2018 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 SUPERFAMILY SSF46548 5 154 7.67E-35 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 476 1.5E-25 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 SUPERFAMILY SSF51971 378 485 1.88E-8 T 13-10-2018 TREPR_3467 7c0f270603f2daeb756b6a9174803716 487 SUPERFAMILY SSF51971 142 421 5.36E-59 T 13-10-2018 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 SUPERFAMILY SSF52922 260 420 9.55E-46 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Gene3D G3DSA:3.30.70.20 676 801 3.2E-30 T 13-10-2018 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 SUPERFAMILY SSF52518 5 259 9.42E-73 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Pfam PF10371 Domain of unknown function 639 685 1.2E-15 T 13-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 SUPERFAMILY SSF52518 806 1185 9.42E-124 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 1184 0.0 T 13-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Gene3D G3DSA:3.40.920.10 423 631 5.6E-81 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 972 1083 1.0E-8 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 433 615 4.0E-28 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 351 5.7E-16 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Pfam PF12838 4Fe-4S dicluster domain 696 764 2.5E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Gene3D G3DSA:3.40.50.970 3 259 2.9E-104 T 13-10-2018 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 SUPERFAMILY SSF53323 424 675 1.11E-73 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 248 4.9E-80 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Gene3D G3DSA:3.40.50.970 804 1185 1.1E-155 T 13-10-2018 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 Gene3D G3DSA:3.40.50.920 260 422 3.8E-61 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 PIRSF PIRSF000159 1 1187 0.0 T 13-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 SMART SM00890 629 686 2.3E-18 T 13-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 752 763 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1990 8a1f3676aa36363a630afc7737697b3f 1187 SUPERFAMILY SSF54862 672 847 1.88E-15 T 13-10-2018 TREPR_2947 65782334f0fbd6e2c3b4af7f92c5143f 123 Gene3D G3DSA:1.10.10.10 6 123 2.1E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2947 65782334f0fbd6e2c3b4af7f92c5143f 123 Pfam PF01022 Bacterial regulatory protein, arsR family 46 92 5.7E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2947 65782334f0fbd6e2c3b4af7f92c5143f 123 SMART SM00418 39 117 1.1E-26 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2947 65782334f0fbd6e2c3b4af7f92c5143f 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 1.1E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2947 65782334f0fbd6e2c3b4af7f92c5143f 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 88 103 1.1E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2947 65782334f0fbd6e2c3b4af7f92c5143f 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 71 1.1E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2947 65782334f0fbd6e2c3b4af7f92c5143f 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.1E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2947 65782334f0fbd6e2c3b4af7f92c5143f 123 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 62 80 - T 13-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 TREPR_2947 65782334f0fbd6e2c3b4af7f92c5143f 123 SUPERFAMILY SSF46785 22 113 9.22E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1183 fb3a6bbbf0182791be72949c062f6542 137 Gene3D G3DSA:3.40.50.1010 3 137 8.8E-38 T 13-10-2018 TREPR_1183 fb3a6bbbf0182791be72949c062f6542 137 SUPERFAMILY SSF88723 2 136 2.44E-28 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_1183 fb3a6bbbf0182791be72949c062f6542 137 Pfam PF01850 PIN domain 3 128 5.1E-15 T 13-10-2018 IPR002716 PIN domain TREPR_1922 3a455bf8452339bee7cce3b19e08b0aa 77 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 61 7.7E-28 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TREPR_1922 3a455bf8452339bee7cce3b19e08b0aa 77 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 62 17.801 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TREPR_1922 3a455bf8452339bee7cce3b19e08b0aa 77 Gene3D G3DSA:3.30.70.1680 1 62 7.6E-27 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TREPR_1922 3a455bf8452339bee7cce3b19e08b0aa 77 Pfam PF02599 Global regulator protein family 1 52 1.2E-23 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TREPR_1922 3a455bf8452339bee7cce3b19e08b0aa 77 SUPERFAMILY SSF117130 1 55 1.14E-18 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TREPR_1922 3a455bf8452339bee7cce3b19e08b0aa 77 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 3.0E-5 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TREPR_1766 7272c3e474f9d98e21aca4c1402d3be6 314 Pfam PF00472 RF-1 domain 172 281 2.5E-40 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TREPR_1766 7272c3e474f9d98e21aca4c1402d3be6 314 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 3 309 32.438 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 TREPR_1766 7272c3e474f9d98e21aca4c1402d3be6 314 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 307 2.6E-139 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 TREPR_1766 7272c3e474f9d98e21aca4c1402d3be6 314 Gene3D G3DSA:3.30.160.20 169 264 1.3E-92 T 13-10-2018 TREPR_1766 7272c3e474f9d98e21aca4c1402d3be6 314 SUPERFAMILY SSF75620 3 309 1.03E-116 T 13-10-2018 TREPR_1766 7272c3e474f9d98e21aca4c1402d3be6 314 Gene3D G3DSA:3.30.70.1660 74 302 1.3E-92 T 13-10-2018 TREPR_1766 7272c3e474f9d98e21aca4c1402d3be6 314 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 188 204 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TREPR_1766 7272c3e474f9d98e21aca4c1402d3be6 314 SMART SM00937 29 138 1.8E-40 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 TREPR_1766 7272c3e474f9d98e21aca4c1402d3be6 314 Pfam PF03462 PCRF domain 3 163 4.7E-48 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 TREPR_3725 c6a71d333df1618479fd978ef61dd672 351 Pfam PF01757 Acyltransferase family 14 329 7.8E-28 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 TREPR_2387 e46d08d19e75726e40811fe5f4e0c43e 361 Gene3D G3DSA:3.90.25.10 192 340 4.0E-168 T 13-10-2018 TREPR_2387 e46d08d19e75726e40811fe5f4e0c43e 361 Gene3D G3DSA:3.40.50.720 4 326 4.0E-168 T 13-10-2018 TREPR_2387 e46d08d19e75726e40811fe5f4e0c43e 361 SUPERFAMILY SSF51735 2 341 4.26E-79 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2387 e46d08d19e75726e40811fe5f4e0c43e 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 335 1.2E-157 T 13-10-2018 IPR016040 NAD(P)-binding domain TREPR_2387 e46d08d19e75726e40811fe5f4e0c43e 361 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 342 2.6E-184 T 13-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 TREPR_2387 e46d08d19e75726e40811fe5f4e0c43e 361 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 345 57.752 T 13-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 TREPR_0309 c2a5782c486983a64d2c0a998a591924 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 16 331 9.3E-89 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 TREPR_0309 c2a5782c486983a64d2c0a998a591924 350 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 11 334 23.383 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 TREPR_0309 c2a5782c486983a64d2c0a998a591924 350 Pfam PF03116 NQR2, RnfD, RnfE family 14 330 4.6E-106 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 TREPR_1385 d2f87c6cc3f89d19672949f11a373927 124 Gene3D G3DSA:3.30.70.120 1 88 1.1E-12 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TREPR_2085 702ea5d8015632c452de3184e1a6f363 406 SUPERFAMILY SSF52540 3 156 8.68E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2085 702ea5d8015632c452de3184e1a6f363 406 Gene3D G3DSA:3.40.50.300 12 230 7.9E-32 T 13-10-2018 TREPR_2085 702ea5d8015632c452de3184e1a6f363 406 Gene3D G3DSA:3.30.420.280 232 403 1.0E-26 T 13-10-2018 TREPR_2085 702ea5d8015632c452de3184e1a6f363 406 Pfam PF03237 Terminase-like family 26 243 6.9E-12 T 13-10-2018 IPR004921 Terminase large subunit, T4likevirus-type TREPR_2355 f59d037a11c4800d2c81409aa54bbc3b 180 Pfam PF02357 Transcription termination factor nusG 1 101 4.4E-9 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TREPR_2355 f59d037a11c4800d2c81409aa54bbc3b 180 SUPERFAMILY SSF82679 1 106 4.71E-13 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TREPR_2355 f59d037a11c4800d2c81409aa54bbc3b 180 Gene3D G3DSA:3.30.70.940 1 108 2.5E-11 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TREPR_2355 f59d037a11c4800d2c81409aa54bbc3b 180 SMART SM00738 1 106 0.0097 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TREPR_2355 f59d037a11c4800d2c81409aa54bbc3b 180 Gene3D G3DSA:2.30.30.30 114 171 2.5E-9 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 TREPR_2355 f59d037a11c4800d2c81409aa54bbc3b 180 SUPERFAMILY SSF50104 117 169 1.56E-6 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 6 509 6.2E-216 T 13-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 SUPERFAMILY SSF54791 199 292 5.06E-17 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 SMART SM00471 321 427 7.4E-14 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 Gene3D G3DSA:3.30.1370.10 197 291 4.9E-9 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 SMART SM00322 192 264 9.3E-9 T 13-10-2018 IPR004087 K Homology domain GO:0003676 TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 SUPERFAMILY SSF109604 306 458 3.14E-31 T 13-10-2018 TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 Pfam PF12072 Domain of unknown function (DUF3552) 3 193 1.0E-47 T 13-10-2018 IPR022711 Ribonuclease Y, N-terminal TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 Hamap MF_00335 Ribonuclease Y [rny]. 1 509 23.694 T 13-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 TIGRFAM TIGR00277 HDIG: HDIG domain 321 398 4.0E-25 T 13-10-2018 IPR006675 HDIG domain TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 Pfam PF01966 HD domain 325 417 4.2E-21 T 13-10-2018 IPR006674 HD domain TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 Gene3D G3DSA:1.10.3210.10 314 484 3.5E-19 T 13-10-2018 TREPR_3032 276412bb2487db3a507e2af8727e01b0 509 Pfam PF00013 KH domain 202 258 3.4E-8 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TREPR_1397 863854d8c550c878f4e68bd8f8ac0608 685 Gene3D G3DSA:3.55.50.30 43 129 8.8E-14 T 13-10-2018 TREPR_1397 863854d8c550c878f4e68bd8f8ac0608 685 Pfam PF00263 Bacterial type II and III secretion system protein 497 657 1.1E-29 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 TREPR_1397 863854d8c550c878f4e68bd8f8ac0608 685 Pfam PF03958 Bacterial type II/III secretion system short domain 310 368 2.7E-6 T 13-10-2018 IPR005644 NolW-like TREPR_1397 863854d8c550c878f4e68bd8f8ac0608 685 PRINTS PR00811 Bacterial general secretion pathway protein D signature 430 440 8.0E-9 T 13-10-2018 IPR001775 GspD/PilQ family TREPR_1397 863854d8c550c878f4e68bd8f8ac0608 685 PRINTS PR00811 Bacterial general secretion pathway protein D signature 646 660 8.0E-9 T 13-10-2018 IPR001775 GspD/PilQ family TREPR_1397 863854d8c550c878f4e68bd8f8ac0608 685 PRINTS PR00811 Bacterial general secretion pathway protein D signature 623 641 8.0E-9 T 13-10-2018 IPR001775 GspD/PilQ family TREPR_1397 863854d8c550c878f4e68bd8f8ac0608 685 Gene3D G3DSA:3.30.1370.120 291 370 2.5E-8 T 13-10-2018 IPR038591 NolW-like superfamily TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SUPERFAMILY SSF103190 194 333 6.59E-10 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Pfam PF08448 PAS fold 736 845 5.2E-15 T 13-10-2018 IPR013656 PAS fold-4 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Pfam PF00072 Response regulator receiver domain 1129 1241 1.6E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 989 1101 3.3E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Pfam PF00512 His Kinase A (phospho-acceptor) domain 872 941 7.5E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SMART SM00387 988 1105 1.9E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Pfam PF13426 PAS domain 621 717 2.3E-5 T 13-10-2018 IPR000014 PAS domain TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1048 1058 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1030 1044 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1089 1102 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1065 1083 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SUPERFAMILY SSF55874 930 1101 1.96E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 726 851 7.2E-18 T 13-10-2018 IPR000014 PAS domain TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Gene3D G3DSA:3.40.50.2300 1107 1245 1.5E-35 T 13-10-2018 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SMART SM00388 871 941 1.6E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SUPERFAMILY SSF52172 1123 1248 5.55E-29 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Gene3D G3DSA:1.20.1480.50 527 620 1.1E-6 T 13-10-2018 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SMART SM00091 730 796 0.014 T 13-10-2018 IPR000014 PAS domain TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SMART SM00091 610 679 4.5 T 13-10-2018 IPR000014 PAS domain TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Gene3D G3DSA:3.30.565.10 943 1106 1.2E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Gene3D G3DSA:1.10.287.130 856 942 5.2E-24 T 13-10-2018 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SMART SM00448 1126 1244 4.0E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SUPERFAMILY SSF55785 621 727 4.01E-7 T 13-10-2018 IPR035965 PAS domain superfamily TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SUPERFAMILY SSF55785 716 842 3.14E-21 T 13-10-2018 IPR035965 PAS domain superfamily TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 SUPERFAMILY SSF47384 857 942 1.67E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Gene3D G3DSA:3.30.450.20 621 730 8.5E-9 T 13-10-2018 TREPR_1586 a6bc76753f85926cfd3b2d46a14c5ddd 1252 Gene3D G3DSA:3.30.450.20 731 855 2.1E-20 T 13-10-2018 TREPR_1289 47154fece64635e3c6714a6e460629cc 362 Pfam PF08218 Citrate lyase ligase C-terminal domain 178 357 2.4E-64 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_1289 47154fece64635e3c6714a6e460629cc 362 Gene3D G3DSA:3.40.630.30 16 115 3.5E-5 T 13-10-2018 TREPR_1289 47154fece64635e3c6714a6e460629cc 362 Gene3D G3DSA:3.40.50.620 183 361 2.3E-14 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1289 47154fece64635e3c6714a6e460629cc 362 SUPERFAMILY SSF52374 182 359 4.57E-21 T 13-10-2018 TREPR_1289 47154fece64635e3c6714a6e460629cc 362 SUPERFAMILY SSF55729 27 110 2.57E-8 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_1289 47154fece64635e3c6714a6e460629cc 362 SMART SM00764 177 357 1.6E-87 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_1289 47154fece64635e3c6714a6e460629cc 362 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 179 357 1.0E-44 T 13-10-2018 TREPR_2222 cd587c77ef488ef3d62290876841c9c1 166 Pfam PF02674 Colicin V production protein 6 149 2.4E-27 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 TREPR_0382 d001cfa73f7216b2c3a4e17d5aa11397 502 Pfam PF04715 Anthranilate synthase component I, N terminal region 31 169 6.1E-28 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TREPR_0382 d001cfa73f7216b2c3a4e17d5aa11397 502 Pfam PF00425 chorismate binding enzyme 220 474 8.4E-92 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal TREPR_0382 d001cfa73f7216b2c3a4e17d5aa11397 502 SUPERFAMILY SSF56322 18 483 2.09E-142 T 13-10-2018 IPR005801 ADC synthase GO:0009058 TREPR_0382 d001cfa73f7216b2c3a4e17d5aa11397 502 Gene3D G3DSA:3.60.120.10 1 493 1.8E-164 T 13-10-2018 IPR005801 ADC synthase GO:0009058 TREPR_0382 d001cfa73f7216b2c3a4e17d5aa11397 502 PRINTS PR00095 Anthranilate synthase component I signature 322 335 1.4E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TREPR_0382 d001cfa73f7216b2c3a4e17d5aa11397 502 PRINTS PR00095 Anthranilate synthase component I signature 336 349 1.4E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TREPR_0382 d001cfa73f7216b2c3a4e17d5aa11397 502 PRINTS PR00095 Anthranilate synthase component I signature 416 430 1.4E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TREPR_0382 d001cfa73f7216b2c3a4e17d5aa11397 502 PRINTS PR00095 Anthranilate synthase component I signature 431 445 1.4E-22 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TREPR_0742 ea99b2158938b3ee6e2d5903fa714698 66 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 47 5.6E-18 T 13-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB TREPR_3346 9c38be9d6b5b2c0a636ac00415bad2a1 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 222 1.9E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3346 9c38be9d6b5b2c0a636ac00415bad2a1 232 Gene3D G3DSA:1.10.3720.10 4 226 3.2E-40 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3346 9c38be9d6b5b2c0a636ac00415bad2a1 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 118 6.5E-18 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TREPR_3346 9c38be9d6b5b2c0a636ac00415bad2a1 232 SUPERFAMILY SSF161098 15 209 1.03E-31 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0525 570ba603b94ff986da5d51123a88c2d8 419 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 188 2.0E-19 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TREPR_0525 570ba603b94ff986da5d51123a88c2d8 419 Gene3D G3DSA:3.40.1010.10 1 103 1.1E-19 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TREPR_0525 570ba603b94ff986da5d51123a88c2d8 419 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 6 191 1.2E-39 T 13-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 TREPR_0525 570ba603b94ff986da5d51123a88c2d8 419 Gene3D G3DSA:3.40.50.150 231 418 5.0E-65 T 13-10-2018 TREPR_0525 570ba603b94ff986da5d51123a88c2d8 419 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 255 357 5.0E-5 T 13-10-2018 TREPR_0525 570ba603b94ff986da5d51123a88c2d8 419 SUPERFAMILY SSF53790 4 195 3.14E-36 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TREPR_0525 570ba603b94ff986da5d51123a88c2d8 419 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 250 371 1.0E-34 T 13-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 TREPR_0525 570ba603b94ff986da5d51123a88c2d8 419 SUPERFAMILY SSF53335 240 382 4.18E-20 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3263 ae7ff499f7c1f473691135506ee87e30 302 Gene3D G3DSA:3.40.50.410 73 294 3.5E-10 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_3263 ae7ff499f7c1f473691135506ee87e30 302 Pfam PF01882 Protein of unknown function DUF58 37 134 9.7E-21 T 13-10-2018 IPR002881 Domain of unknown function DUF58 TREPR_3263 ae7ff499f7c1f473691135506ee87e30 302 SUPERFAMILY SSF53300 75 227 8.09E-11 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_2543 dd93f40975d6383d915a640bd5c68fc7 669 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 463 664 8.0E-46 T 13-10-2018 TREPR_2543 dd93f40975d6383d915a640bd5c68fc7 669 SMART SM00764 482 663 1.9E-87 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_2543 dd93f40975d6383d915a640bd5c68fc7 669 SUPERFAMILY SSF52374 480 666 2.15E-24 T 13-10-2018 TREPR_2543 dd93f40975d6383d915a640bd5c68fc7 669 Gene3D G3DSA:3.40.50.620 485 668 7.2E-23 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2543 dd93f40975d6383d915a640bd5c68fc7 669 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 482 540 5.4E-7 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TREPR_2543 dd93f40975d6383d915a640bd5c68fc7 669 Pfam PF08218 Citrate lyase ligase C-terminal domain 482 663 8.0E-64 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 SUPERFAMILY SSF50465 270 365 1.04E-13 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 Pfam PF00009 Elongation factor Tu GTP binding domain 8 169 6.2E-31 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 SUPERFAMILY SSF52540 5 170 3.39E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.0E-6 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 PRINTS PR00315 GTP-binding elongation factor signature 59 69 1.0E-6 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 PRINTS PR00315 GTP-binding elongation factor signature 75 86 1.0E-6 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 Gene3D G3DSA:3.40.50.300 6 172 1.5E-47 T 13-10-2018 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 Gene3D G3DSA:1.10.10.10 594 652 5.8E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 Gene3D G3DSA:1.10.10.2770 455 593 2.4E-11 T 13-10-2018 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 7 370 6.3E-89 T 13-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 31 46 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 Pfam PF09107 Elongation factor SelB, winged helix 605 650 2.3E-13 T 13-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 Pfam PF03144 Elongation factor Tu domain 2 196 263 1.1E-10 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 SUPERFAMILY SSF50447 179 267 6.09E-21 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 SUPERFAMILY SSF46785 609 651 4.39E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_3083 3b764efb8b3a9ce882867de617b25b09 652 Gene3D G3DSA:2.40.30.10 179 292 5.7E-29 T 13-10-2018 TREPR_3110 398553f298e005984d9ebeddca1a879c 202 SUPERFAMILY SSF143990 26 195 1.14E-53 T 13-10-2018 IPR037238 YbiA-like superfamily TREPR_3110 398553f298e005984d9ebeddca1a879c 202 Pfam PF08719 Domain of unknown function (DUF1768) 39 194 2.3E-57 T 13-10-2018 IPR012816 NADAR TREPR_3110 398553f298e005984d9ebeddca1a879c 202 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 38 194 1.3E-54 T 13-10-2018 IPR012816 NADAR TREPR_3110 398553f298e005984d9ebeddca1a879c 202 Gene3D G3DSA:1.10.357.40 25 200 3.7E-43 T 13-10-2018 IPR037238 YbiA-like superfamily TREPR_0439 3a8349e206a3bcbacbb7ffe58c24d6bc 132 SUPERFAMILY SSF88723 1 126 2.35E-13 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_0439 3a8349e206a3bcbacbb7ffe58c24d6bc 132 Gene3D G3DSA:3.40.50.1010 1 127 2.4E-23 T 13-10-2018 TREPR_0439 3a8349e206a3bcbacbb7ffe58c24d6bc 132 Pfam PF01850 PIN domain 4 124 3.4E-5 T 13-10-2018 IPR002716 PIN domain TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.8E-38 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.8E-38 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.8E-38 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.8E-38 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.8E-38 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 SUPERFAMILY SSF52374 1 156 5.63E-35 T 13-10-2018 TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 7.5E-50 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 Gene3D G3DSA:3.40.50.620 3 158 3.0E-46 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 Pfam PF01467 Cytidylyltransferase-like 6 133 1.4E-14 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 30.22 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TREPR_2691 e8b91ecec7b79a115ac393ec5fbdbbbc 158 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 58 7.8E-14 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TREPR_0707 ce8bf27626595b93a921d5b1863d4b4e 510 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 428 4.1E-89 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_0707 ce8bf27626595b93a921d5b1863d4b4e 510 Gene3D G3DSA:3.10.105.10 273 485 1.0E-126 T 13-10-2018 TREPR_0707 ce8bf27626595b93a921d5b1863d4b4e 510 SUPERFAMILY SSF53850 34 509 1.43E-130 T 13-10-2018 TREPR_0707 ce8bf27626595b93a921d5b1863d4b4e 510 Gene3D G3DSA:3.90.76.10 48 193 1.0E-126 T 13-10-2018 TREPR_0707 ce8bf27626595b93a921d5b1863d4b4e 510 PIRSF PIRSF002741 1 510 8.7E-111 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_0707 ce8bf27626595b93a921d5b1863d4b4e 510 Gene3D G3DSA:3.40.190.10 194 497 1.0E-126 T 13-10-2018 TREPR_1304 15ce23bd3f3a2b683c48d4b787e4d600 416 SUPERFAMILY SSF51604 165 411 6.55E-83 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TREPR_1304 15ce23bd3f3a2b683c48d4b787e4d600 416 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 162 410 1.1E-117 T 13-10-2018 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 TREPR_1304 15ce23bd3f3a2b683c48d4b787e4d600 416 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 2.7E-74 T 13-10-2018 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 TREPR_1304 15ce23bd3f3a2b683c48d4b787e4d600 416 Gene3D G3DSA:3.30.390.10 1 163 2.0E-69 T 13-10-2018 IPR029017 Enolase-like, N-terminal TREPR_1304 15ce23bd3f3a2b683c48d4b787e4d600 416 Gene3D G3DSA:3.20.20.120 165 413 4.1E-105 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TREPR_1304 15ce23bd3f3a2b683c48d4b787e4d600 416 SUPERFAMILY SSF54826 1 160 5.38E-56 T 13-10-2018 TREPR_1304 15ce23bd3f3a2b683c48d4b787e4d600 416 PIRSF PIRSF017107 1 413 1.1E-196 T 13-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 TREPR_1304 15ce23bd3f3a2b683c48d4b787e4d600 416 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 411 5.1E-182 T 13-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 TREPR_3488 f84b5d6434d850dbd26efe11bca09333 319 Pfam PF00849 RNA pseudouridylate synthase 88 249 2.2E-34 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_3488 f84b5d6434d850dbd26efe11bca09333 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_3488 f84b5d6434d850dbd26efe11bca09333 319 SUPERFAMILY SSF55120 72 313 1.01E-67 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_3488 f84b5d6434d850dbd26efe11bca09333 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 6.5E-72 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_3488 f84b5d6434d850dbd26efe11bca09333 319 Gene3D G3DSA:3.30.2350.10 80 318 2.3E-69 T 13-10-2018 TREPR_3488 f84b5d6434d850dbd26efe11bca09333 319 Gene3D G3DSA:3.10.290.10 7 68 2.0E-6 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TREPR_2872 009312dd85a81f08619bd9be592e9e75 113 PIRSF PIRSF039032 1 108 2.9E-31 T 13-10-2018 IPR009387 Toxin HigB-2 TREPR_2872 009312dd85a81f08619bd9be592e9e75 113 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 42 104 1.7E-8 T 13-10-2018 IPR009387 Toxin HigB-2 TREPR_0318 57537798ac20793692516202f0435b9b 403 Pfam PF13173 AAA domain 38 159 6.7E-31 T 13-10-2018 TREPR_0318 57537798ac20793692516202f0435b9b 403 SMART SM00382 36 156 5.9E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0318 57537798ac20793692516202f0435b9b 403 Gene3D G3DSA:3.40.50.300 24 93 3.7E-5 T 13-10-2018 TREPR_0318 57537798ac20793692516202f0435b9b 403 Pfam PF13635 Domain of unknown function (DUF4143) 209 339 4.0E-11 T 13-10-2018 IPR025420 Domain of unknown function DUF4143 TREPR_0318 57537798ac20793692516202f0435b9b 403 SUPERFAMILY SSF52540 39 192 3.8E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3130 c3d1c7700078950318e8a94c86f1595d 275 Gene3D G3DSA:3.40.50.300 3 275 3.0E-62 T 13-10-2018 TREPR_3130 c3d1c7700078950318e8a94c86f1595d 275 SUPERFAMILY SSF52540 6 230 5.11E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3130 c3d1c7700078950318e8a94c86f1595d 275 Pfam PF00005 ABC transporter 23 168 7.3E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3130 c3d1c7700078950318e8a94c86f1595d 275 SMART SM00382 32 215 2.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 SUPERFAMILY SSF68923 5 239 3.35E-96 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 Gene3D G3DSA:3.90.228.20 240 603 1.3E-258 T 13-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 240 604 5.6E-167 T 13-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 264 272 - T 13-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 SUPERFAMILY SSF53795 240 605 2.75E-149 T 13-10-2018 TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 Gene3D G3DSA:3.40.449.10 13 239 1.3E-258 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 Gene3D G3DSA:2.170.8.10 49 398 1.3E-258 T 13-10-2018 TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 2 605 48.624 T 13-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 PIRSF PIRSF001348 1 606 4.8E-279 T 13-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TREPR_3050 46b18ffde7481640eec43d6fd160d3b2 606 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 13 236 2.7E-97 T 13-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 TREPR_0285 ad476c28efd9681809e2cf3aa49ebc31 524 SUPERFAMILY SSF161098 267 515 2.35E-32 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0285 ad476c28efd9681809e2cf3aa49ebc31 524 SUPERFAMILY SSF161098 9 245 1.57E-38 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0285 ad476c28efd9681809e2cf3aa49ebc31 524 Gene3D G3DSA:1.10.3720.10 6 253 4.6E-44 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0285 ad476c28efd9681809e2cf3aa49ebc31 524 Gene3D G3DSA:1.10.3720.10 273 522 3.9E-28 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0285 ad476c28efd9681809e2cf3aa49ebc31 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 238 4.1E-11 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0285 ad476c28efd9681809e2cf3aa49ebc31 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 339 520 3.5E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3112 da61a2b8895e0781182e51c97cf9929e 207 Pfam PF00717 Peptidase S24-like 120 188 2.9E-6 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TREPR_3112 da61a2b8895e0781182e51c97cf9929e 207 SUPERFAMILY SSF51306 81 205 2.62E-20 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TREPR_3112 da61a2b8895e0781182e51c97cf9929e 207 SUPERFAMILY SSF47413 6 69 2.48E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3112 da61a2b8895e0781182e51c97cf9929e 207 Gene3D G3DSA:1.10.260.40 3 84 1.1E-7 T 13-10-2018 TREPR_3112 da61a2b8895e0781182e51c97cf9929e 207 Gene3D G3DSA:2.10.109.10 85 207 4.4E-17 T 13-10-2018 TREPR_0650 260d354bd38b2c9a4c15aa61cd9da90a 309 Gene3D G3DSA:3.30.1330.60 169 309 2.6E-23 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_0650 260d354bd38b2c9a4c15aa61cd9da90a 309 SUPERFAMILY SSF103088 196 307 7.32E-22 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_0650 260d354bd38b2c9a4c15aa61cd9da90a 309 Pfam PF00691 OmpA family 206 295 2.0E-11 T 13-10-2018 IPR006665 OmpA-like domain TREPR_0650 260d354bd38b2c9a4c15aa61cd9da90a 309 SUPERFAMILY SSF101447 44 189 5.49E-7 T 13-10-2018 TREPR_0650 260d354bd38b2c9a4c15aa61cd9da90a 309 PRINTS PR00806 Vinculin signature 31 41 6.0E-5 T 13-10-2018 TREPR_0650 260d354bd38b2c9a4c15aa61cd9da90a 309 PRINTS PR00806 Vinculin signature 46 59 6.0E-5 T 13-10-2018 TREPR_0804 a7b05a9187c59df5384c32408511ea3b 287 Gene3D G3DSA:2.70.70.10 16 148 5.7E-10 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_0804 a7b05a9187c59df5384c32408511ea3b 287 SUPERFAMILY SSF51261 22 147 1.1E-7 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_0804 a7b05a9187c59df5384c32408511ea3b 287 Pfam PF01551 Peptidase family M23 49 143 3.8E-5 T 13-10-2018 IPR016047 Peptidase M23 TREPR_1974 a24694dd5b44cedb79fd13d07bd62733 398 Gene3D G3DSA:3.40.190.10 3 138 6.3E-14 T 13-10-2018 TREPR_1974 a24694dd5b44cedb79fd13d07bd62733 398 SUPERFAMILY SSF53850 61 384 2.37E-31 T 13-10-2018 TREPR_1974 a24694dd5b44cedb79fd13d07bd62733 398 Gene3D G3DSA:3.40.190.10 168 332 1.4E-16 T 13-10-2018 TREPR_1974 a24694dd5b44cedb79fd13d07bd62733 398 Pfam PF13416 Bacterial extracellular solute-binding protein 81 359 1.2E-15 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_0918 f15e8a55223a5785e7dd7f284eb864e5 234 Gene3D G3DSA:3.40.50.1580 2 234 8.7E-70 T 13-10-2018 TREPR_0918 f15e8a55223a5785e7dd7f284eb864e5 234 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 13-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 TREPR_0918 f15e8a55223a5785e7dd7f284eb864e5 234 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 4.3E-95 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 TREPR_0918 f15e8a55223a5785e7dd7f284eb864e5 234 Pfam PF01048 Phosphorylase superfamily 16 218 3.8E-36 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TREPR_0918 f15e8a55223a5785e7dd7f284eb864e5 234 SUPERFAMILY SSF53167 2 233 7.59E-88 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TREPR_0918 f15e8a55223a5785e7dd7f284eb864e5 234 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 45.502 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 TREPR_1787 4814c44200d1037f2df04ce611c89097 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 298 3.2E-20 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1787 4814c44200d1037f2df04ce611c89097 326 Pfam PF00005 ABC transporter 24 181 5.4E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1787 4814c44200d1037f2df04ce611c89097 326 Gene3D G3DSA:3.40.50.300 3 324 5.0E-94 T 13-10-2018 TREPR_1787 4814c44200d1037f2df04ce611c89097 326 SUPERFAMILY SSF52540 15 251 1.25E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1787 4814c44200d1037f2df04ce611c89097 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1787 4814c44200d1037f2df04ce611c89097 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 318 1.6E-25 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1787 4814c44200d1037f2df04ce611c89097 326 SMART SM00382 32 233 1.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1472 114274c873ff61f19eccc064b525a2a8 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1472 114274c873ff61f19eccc064b525a2a8 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.224 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TREPR_1472 114274c873ff61f19eccc064b525a2a8 156 PIRSF PIRSF002122 3 156 8.6E-60 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 TREPR_1472 114274c873ff61f19eccc064b525a2a8 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.3E-63 T 13-10-2018 IPR023798 Ribosomal protein S7 domain TREPR_1472 114274c873ff61f19eccc064b525a2a8 156 Gene3D G3DSA:1.10.455.10 2 156 1.0E-61 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TREPR_1472 114274c873ff61f19eccc064b525a2a8 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.3E-69 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TREPR_1472 114274c873ff61f19eccc064b525a2a8 156 SUPERFAMILY SSF47973 10 149 4.84E-59 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TREPR_3373 1e9ac5c8d3e79866108e423bb034f7ea 223 Gene3D G3DSA:3.30.1150.10 131 221 1.6E-17 T 13-10-2018 TREPR_3373 1e9ac5c8d3e79866108e423bb034f7ea 223 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 143 220 1.8E-15 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 TREPR_3373 1e9ac5c8d3e79866108e423bb034f7ea 223 SUPERFAMILY SSF74653 142 219 1.83E-16 T 13-10-2018 TREPR_3373 1e9ac5c8d3e79866108e423bb034f7ea 223 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 146 221 1.0E-11 T 13-10-2018 IPR006260 TonB/TolA, C-terminal TREPR_2934 c2eaeda82659140a02a136aef987eb4e 297 Hamap MF_00361 NAD kinase [nadK]. 5 285 27.93 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TREPR_2934 c2eaeda82659140a02a136aef987eb4e 297 Gene3D G3DSA:3.40.50.10330 52 286 1.1E-71 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TREPR_2934 c2eaeda82659140a02a136aef987eb4e 297 Gene3D G3DSA:2.60.200.30 117 262 1.1E-71 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TREPR_2934 c2eaeda82659140a02a136aef987eb4e 297 SUPERFAMILY SSF111331 10 286 3.92E-67 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TREPR_2934 c2eaeda82659140a02a136aef987eb4e 297 Pfam PF01513 ATP-NAD kinase 54 268 1.6E-46 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 SMART SM00480 17 362 1.5E-111 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 Gene3D G3DSA:3.10.150.10 1 242 6.8E-107 T 13-10-2018 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 3.8E-26 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 SUPERFAMILY SSF55979 128 244 1.74E-25 T 13-10-2018 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 4.1E-105 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 SUPERFAMILY SSF55979 1 120 1.49E-16 T 13-10-2018 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 365 1.7E-26 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 Gene3D G3DSA:3.70.10.10 138 364 6.8E-107 T 13-10-2018 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.2E-21 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 SUPERFAMILY SSF55979 246 366 1.35E-29 T 13-10-2018 TREPR_0275 e7a6164eb623b5f2aed5c17c6a255a68 367 PIRSF PIRSF000804 1 367 6.6E-108 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 3 263 5.5E-92 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 Gene3D G3DSA:3.40.50.1980 306 459 1.8E-28 T 13-10-2018 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 SUPERFAMILY SSF52540 2 267 2.35E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 ProSitePatterns PS00746 NifH/frxC family signature 1. 85 97 - T 13-10-2018 IPR030655 NifH/chlL conserved site TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 SUPERFAMILY SSF53807 299 722 8.18E-64 T 13-10-2018 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 Gene3D G3DSA:3.40.50.12380 460 711 5.6E-35 T 13-10-2018 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 Gene3D G3DSA:3.40.50.300 1 270 2.0E-57 T 13-10-2018 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 PRINTS PR00091 Nitrogenase component II signature 29 44 7.2E-33 T 13-10-2018 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 PRINTS PR00091 Nitrogenase component II signature 7 20 7.2E-33 T 13-10-2018 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 PRINTS PR00091 Nitrogenase component II signature 83 97 7.2E-33 T 13-10-2018 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 PRINTS PR00091 Nitrogenase component II signature 122 137 7.2E-33 T 13-10-2018 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 306 711 2.5E-61 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_0541 2b53f91d1e18c6b6d5eaf6417e3ebc80 733 ProSitePatterns PS00692 NifH/frxC family signature 2. 123 136 - T 13-10-2018 IPR030655 NifH/chlL conserved site TREPR_1477 0697b8a8f843d828b2959cc91c725179 206 ProSitePatterns PS00474 Ribosomal protein L3 signature. 99 122 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site TREPR_1477 0697b8a8f843d828b2959cc91c725179 206 Gene3D G3DSA:2.40.50.620 32 90 1.8E-14 T 13-10-2018 TREPR_1477 0697b8a8f843d828b2959cc91c725179 206 Gene3D G3DSA:2.40.30.10 126 206 1.3E-12 T 13-10-2018 TREPR_1477 0697b8a8f843d828b2959cc91c725179 206 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 204 36.276 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1477 0697b8a8f843d828b2959cc91c725179 206 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 201 5.6E-79 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1477 0697b8a8f843d828b2959cc91c725179 206 SUPERFAMILY SSF50447 1 205 2.03E-70 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_1477 0697b8a8f843d828b2959cc91c725179 206 Pfam PF00297 Ribosomal protein L3 84 179 6.3E-15 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1508 9bc53ff7d9f7787055e93b2930c96924 297 Gene3D G3DSA:3.20.20.140 1 214 8.3E-31 T 13-10-2018 TREPR_1508 9bc53ff7d9f7787055e93b2930c96924 297 SUPERFAMILY SSF89550 12 215 9.81E-23 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TREPR_2710 4e26c45693fd24d5e8cde3c7631edac8 370 Gene3D G3DSA:2.40.30.170 56 288 4.8E-42 T 13-10-2018 TREPR_2710 4e26c45693fd24d5e8cde3c7631edac8 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 216 2.0E-9 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TREPR_2710 4e26c45693fd24d5e8cde3c7631edac8 370 Gene3D G3DSA:1.10.287.470 100 156 4.8E-42 T 13-10-2018 TREPR_2710 4e26c45693fd24d5e8cde3c7631edac8 370 SUPERFAMILY SSF111369 63 261 8.24E-12 T 13-10-2018 TREPR_2710 4e26c45693fd24d5e8cde3c7631edac8 370 Gene3D G3DSA:2.40.50.100 66 193 4.8E-42 T 13-10-2018 TREPR_2710 4e26c45693fd24d5e8cde3c7631edac8 370 Gene3D G3DSA:2.40.420.20 289 357 4.8E-42 T 13-10-2018 TREPR_2710 4e26c45693fd24d5e8cde3c7631edac8 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 360 3.8E-38 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TREPR_2362 d0bc70714e2aba362c8bb9b7834e038f 377 Gene3D G3DSA:3.40.50.1970 4 168 2.1E-40 T 13-10-2018 TREPR_2362 d0bc70714e2aba362c8bb9b7834e038f 377 Pfam PF01761 3-dehydroquinate synthase 63 340 4.8E-71 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TREPR_2362 d0bc70714e2aba362c8bb9b7834e038f 377 SUPERFAMILY SSF56796 18 354 1.51E-67 T 13-10-2018 TREPR_2362 d0bc70714e2aba362c8bb9b7834e038f 377 Gene3D G3DSA:1.20.1090.10 169 370 2.7E-41 T 13-10-2018 TREPR_1988 77e41d257b85697e7f1837c0230a881c 432 Gene3D G3DSA:3.40.50.2000 227 408 1.4E-14 T 13-10-2018 TREPR_1988 77e41d257b85697e7f1837c0230a881c 432 Gene3D G3DSA:3.40.50.2000 12 226 1.9E-5 T 13-10-2018 TREPR_1988 77e41d257b85697e7f1837c0230a881c 432 SUPERFAMILY SSF53756 12 424 4.08E-29 T 13-10-2018 TREPR_2145 864f43e200fc65c55eaf4d4dbc4fd02c 448 Gene3D G3DSA:3.30.300.30 342 445 1.2E-30 T 13-10-2018 TREPR_2145 864f43e200fc65c55eaf4d4dbc4fd02c 448 PIRSF PIRSF006444 11 446 4.5E-170 T 13-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 TREPR_2145 864f43e200fc65c55eaf4d4dbc4fd02c 448 SUPERFAMILY SSF56801 47 410 3.92E-55 T 13-10-2018 TREPR_2145 864f43e200fc65c55eaf4d4dbc4fd02c 448 Pfam PF14535 AMP-binding enzyme C-terminal domain 348 444 1.5E-27 T 13-10-2018 IPR028154 AMP-dependent ligase, C-terminal TREPR_2145 864f43e200fc65c55eaf4d4dbc4fd02c 448 Gene3D G3DSA:3.40.50.12780 13 341 1.4E-118 T 13-10-2018 TREPR_2145 864f43e200fc65c55eaf4d4dbc4fd02c 448 Pfam PF00501 AMP-binding enzyme 93 298 1.8E-17 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 Pfam PF14842 FliG N-terminal domain 234 336 6.6E-24 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 Pfam PF01706 FliG C-terminal domain 450 556 5.6E-27 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 Pfam PF14841 FliG middle domain 345 417 1.6E-15 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 PRINTS PR00954 Flagellar motor switch protein FliG signature 427 452 9.3E-32 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 PRINTS PR00954 Flagellar motor switch protein FliG signature 260 286 9.3E-32 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 PRINTS PR00954 Flagellar motor switch protein FliG signature 504 530 9.3E-32 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 PRINTS PR00954 Flagellar motor switch protein FliG signature 458 478 9.3E-32 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 PRINTS PR00954 Flagellar motor switch protein FliG signature 480 500 9.3E-32 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 247 9.3E-32 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 PRINTS PR00954 Flagellar motor switch protein FliG signature 343 366 9.3E-32 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 Gene3D G3DSA:1.10.220.30 428 564 2.4E-28 T 13-10-2018 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 SUPERFAMILY SSF48029 231 333 2.62E-14 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 Gene3D G3DSA:1.10.220.30 224 305 9.3E-13 T 13-10-2018 TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 SUPERFAMILY SSF48029 345 557 1.01E-36 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TREPR_1015 37e2256a10fbd8c931e6ace6dc89b8a1 564 Gene3D G3DSA:1.10.220.30 318 421 1.1E-17 T 13-10-2018 TREPR_3785 481c0f53b5432a05ed20d83bc3ff0dcf 116 Gene3D G3DSA:2.60.120.10 2 107 1.9E-18 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_3785 481c0f53b5432a05ed20d83bc3ff0dcf 116 SUPERFAMILY SSF51182 7 102 7.43E-20 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_3785 481c0f53b5432a05ed20d83bc3ff0dcf 116 Pfam PF07883 Cupin domain 31 98 1.6E-16 T 13-10-2018 IPR013096 Cupin 2, conserved barrel TREPR_2612 9ab6a540d01f8695b43bd10f29b87a93 164 SUPERFAMILY SSF141694 6 89 1.26E-7 T 13-10-2018 TREPR_2612 9ab6a540d01f8695b43bd10f29b87a93 164 Pfam PF08922 Domain of unknown function (DUF1905) 19 88 3.5E-5 T 13-10-2018 IPR015018 Protein of unknown function DUF1905 TREPR_2612 9ab6a540d01f8695b43bd10f29b87a93 164 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 101 151 2.4E-9 T 13-10-2018 TREPR_3153 6209148ba5d59973412c64aa54a1c94a 82 Gene3D G3DSA:3.30.1320.10 1 82 6.9E-30 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3153 6209148ba5d59973412c64aa54a1c94a 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 80 2.0E-30 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3153 6209148ba5d59973412c64aa54a1c94a 82 SUPERFAMILY SSF54565 3 80 4.45E-28 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3153 6209148ba5d59973412c64aa54a1c94a 82 Pfam PF00886 Ribosomal protein S16 9 68 1.4E-22 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3153 6209148ba5d59973412c64aa54a1c94a 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 78 22.611 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2697 700ae27d7e5e4a9cc1c41b486787a266 405 Gene3D G3DSA:3.90.1150.10 16 389 8.1E-117 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_2697 700ae27d7e5e4a9cc1c41b486787a266 405 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TREPR_2697 700ae27d7e5e4a9cc1c41b486787a266 405 SUPERFAMILY SSF53383 25 404 1.86E-77 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_2697 700ae27d7e5e4a9cc1c41b486787a266 405 Gene3D G3DSA:3.40.640.10 73 303 8.1E-117 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_2697 700ae27d7e5e4a9cc1c41b486787a266 405 Pfam PF00155 Aminotransferase class I and II 35 391 4.4E-49 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 SUPERFAMILY SSF51735 1 148 3.02E-22 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 124 260 1.7E-59 T 13-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 285 2.6E-130 T 13-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 PIRSF PIRSF015689 1 288 9.1E-120 T 13-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 Gene3D G3DSA:3.30.360.10 124 274 1.2E-114 T 13-10-2018 TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 Gene3D G3DSA:3.40.50.720 4 281 1.2E-114 T 13-10-2018 TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 SMART SM00859 5 116 3.9E-4 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 113 1.7E-8 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 288 112.71 T 13-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 TREPR_1323 5a93865b27bc4637efb45d9cade9bf21 288 SUPERFAMILY SSF55347 124 260 6.54E-57 T 13-10-2018 TREPR_1715 9eaa8fac1a7655cf942d3ad94076bde1 380 SUPERFAMILY SSF51713 4 372 3.79E-140 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TREPR_1715 9eaa8fac1a7655cf942d3ad94076bde1 380 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 368 2.6E-76 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TREPR_1715 9eaa8fac1a7655cf942d3ad94076bde1 380 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 374 4.4E-140 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TREPR_1715 9eaa8fac1a7655cf942d3ad94076bde1 380 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 371 50.125 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TREPR_1715 9eaa8fac1a7655cf942d3ad94076bde1 380 Gene3D G3DSA:3.20.20.105 3 376 1.8E-149 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TREPR_1715 9eaa8fac1a7655cf942d3ad94076bde1 380 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 373 1.1E-145 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TREPR_3184 5c3b79d644ff317eeee0922af4898ec7 289 Gene3D G3DSA:3.40.50.300 10 263 8.7E-61 T 13-10-2018 TREPR_3184 5c3b79d644ff317eeee0922af4898ec7 289 SMART SM00382 55 243 2.4E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3184 5c3b79d644ff317eeee0922af4898ec7 289 Pfam PF00005 ABC transporter 46 191 2.7E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3184 5c3b79d644ff317eeee0922af4898ec7 289 SUPERFAMILY SSF52540 42 240 2.24E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3184 5c3b79d644ff317eeee0922af4898ec7 289 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 Pfam PF00149 Calcineurin-like phosphoesterase 38 247 2.0E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 PRINTS PR01607 Apyrase family signature 229 252 3.4E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 PRINTS PR01607 Apyrase family signature 257 277 3.4E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 PRINTS PR01607 Apyrase family signature 203 220 3.4E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 PRINTS PR01607 Apyrase family signature 447 466 3.4E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 PRINTS PR01607 Apyrase family signature 35 53 3.4E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 PRINTS PR01607 Apyrase family signature 375 398 3.4E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 Gene3D G3DSA:3.90.780.10 316 507 2.4E-43 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 SUPERFAMILY SSF55816 312 512 2.09E-46 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 Pfam PF02872 5'-nucleotidase, C-terminal domain 317 471 8.6E-33 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 ProSitePatterns PS00785 5'-nucleotidase signature 1. 37 49 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 SUPERFAMILY SSF56300 33 313 1.01E-77 T 13-10-2018 TREPR_2839 5be9295de14f01dca355e4bf6b456aa7 516 Gene3D G3DSA:3.60.21.10 31 314 1.5E-80 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Gene3D G3DSA:1.25.40.20 447 532 2.7E-17 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Gene3D G3DSA:1.25.40.20 38 150 1.1E-19 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 73 102 0.28 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 785 818 0.16 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 203 237 200.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 688 717 17.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 622 651 0.0023 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 455 485 0.024 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 589 618 26.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 323 353 710.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 391 420 0.049 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 883 912 2.9E-4 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 357 387 140.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 106 135 0.66 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 819 848 140.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 257 286 4.0E-6 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 655 684 150.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 721 750 1.3E-4 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 170 199 0.82 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 290 319 2.4E-4 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 489 518 140.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SMART SM00248 556 585 0.42 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SUPERFAMILY SSF48403 452 529 2.49E-13 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Pfam PF13857 Ankyrin repeats (many copies) 710 762 3.0E-7 T 13-10-2018 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Pfam PF13857 Ankyrin repeats (many copies) 66 114 6.3E-9 T 13-10-2018 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Gene3D G3DSA:1.25.40.20 778 873 1.2E-13 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SUPERFAMILY SSF48403 66 463 1.19E-63 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Gene3D G3DSA:1.25.40.20 333 446 6.9E-23 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Gene3D G3DSA:1.25.40.20 659 777 1.4E-27 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Pfam PF12796 Ankyrin repeats (3 copies) 339 419 2.6E-7 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Pfam PF12796 Ankyrin repeats (3 copies) 434 519 1.2E-6 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Pfam PF12796 Ankyrin repeats (3 copies) 238 321 1.7E-13 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Pfam PF12796 Ankyrin repeats (3 copies) 594 686 1.4E-10 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Pfam PF12796 Ankyrin repeats (3 copies) 839 914 2.9E-6 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Gene3D G3DSA:1.25.40.20 874 938 5.2E-12 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Gene3D G3DSA:1.25.40.20 536 658 2.0E-25 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 SUPERFAMILY SSF48403 559 936 1.39E-63 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 Gene3D G3DSA:1.25.40.20 152 332 1.2E-39 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 PRINTS PR01415 Ankyrin repeat signature 74 89 2.9E-7 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2927 c3da5971b7299b7332b42bb069b284b2 938 PRINTS PR01415 Ankyrin repeat signature 306 320 2.9E-7 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_0864 3cc2a0459bd31190dc926fc10bbfb64a 200 SUPERFAMILY SSF143422 1 129 3.92E-32 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TREPR_0864 3cc2a0459bd31190dc926fc10bbfb64a 200 SMART SM01321 8 123 1.1E-37 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TREPR_0864 3cc2a0459bd31190dc926fc10bbfb64a 200 Pfam PF01797 Transposase IS200 like 12 122 2.6E-18 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TREPR_0864 3cc2a0459bd31190dc926fc10bbfb64a 200 Gene3D G3DSA:3.30.70.1290 1 160 6.1E-37 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TREPR_0484 aa61664dbeb460ae222d09810582da60 227 Gene3D G3DSA:3.90.870.10 2 225 7.7E-37 T 13-10-2018 TREPR_0484 aa61664dbeb460ae222d09810582da60 227 SUPERFAMILY SSF55821 7 145 2.47E-27 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TREPR_0484 aa61664dbeb460ae222d09810582da60 227 Pfam PF01300 Telomere recombination 20 146 1.3E-23 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Gene3D G3DSA:3.40.950.10 271 506 4.2E-127 T 13-10-2018 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 SMART SM00929 85 125 7.3E-16 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 7 78 2.1E-12 T 13-10-2018 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 141 516 1.4E-127 T 13-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Pfam PF02256 Iron hydrogenase small subunit 523 569 9.2E-10 T 13-10-2018 IPR003149 Iron hydrogenase, small subunit TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Gene3D G3DSA:3.40.50.1780 207 515 4.2E-127 T 13-10-2018 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 226 512 2.3E-84 T 13-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Gene3D G3DSA:3.10.20.740 5 125 1.3E-37 T 13-10-2018 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Gene3D G3DSA:3.30.70.20 143 206 4.2E-127 T 13-10-2018 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Pfam PF00037 4Fe-4S binding domain 189 206 2.7E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 SUPERFAMILY SSF53920 191 568 1.01E-101 T 13-10-2018 IPR009016 Iron hydrogenase TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 SMART SM00902 516 572 1.0E-5 T 13-10-2018 IPR003149 Iron hydrogenase, small subunit TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Gene3D G3DSA:4.10.260.20 518 577 5.6E-6 T 13-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 SUPERFAMILY SSF54862 77 211 8.37E-35 T 13-10-2018 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 124 9.6E-15 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 34 51 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3288 2b4c47f0d529aec87100e1a459dd3420 577 SUPERFAMILY SSF54292 7 76 1.44E-16 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TREPR_3742 2e5a3cd1aee3925fe995648409dac872 569 SMART SM00382 381 567 3.9E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3742 2e5a3cd1aee3925fe995648409dac872 569 Gene3D G3DSA:1.20.1560.10 15 326 9.1E-19 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_3742 2e5a3cd1aee3925fe995648409dac872 569 Pfam PF00664 ABC transporter transmembrane region 60 263 1.7E-8 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TREPR_3742 2e5a3cd1aee3925fe995648409dac872 569 Pfam PF00005 ABC transporter 372 519 1.9E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3742 2e5a3cd1aee3925fe995648409dac872 569 SUPERFAMILY SSF90123 10 504 1.7E-29 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_3742 2e5a3cd1aee3925fe995648409dac872 569 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3742 2e5a3cd1aee3925fe995648409dac872 569 SUPERFAMILY SSF52540 350 569 1.7E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3742 2e5a3cd1aee3925fe995648409dac872 569 Gene3D G3DSA:3.40.50.300 350 569 1.3E-71 T 13-10-2018 TREPR_3755 3478f07f64dc331bae91f69d6f3c7eac 165 SUPERFAMILY SSF52833 3 163 4.14E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_3755 3478f07f64dc331bae91f69d6f3c7eac 165 Pfam PF01323 DSBA-like thioredoxin domain 5 146 1.9E-13 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TREPR_3755 3478f07f64dc331bae91f69d6f3c7eac 165 Gene3D G3DSA:3.40.30.10 2 165 6.2E-27 T 13-10-2018 TREPR_1326 3895b3dae1cab9b3f38da18cde57a4bd 308 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 245 266 - T 13-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 TREPR_1326 3895b3dae1cab9b3f38da18cde57a4bd 308 SUPERFAMILY SSF54593 6 298 1.19E-35 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TREPR_1326 3895b3dae1cab9b3f38da18cde57a4bd 308 Gene3D G3DSA:3.10.180.10 3 133 2.2E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TREPR_1326 3895b3dae1cab9b3f38da18cde57a4bd 308 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 151 266 3.0E-15 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TREPR_1326 3895b3dae1cab9b3f38da18cde57a4bd 308 TIGRFAM TIGR03211 catechol_2_3: catechol 2,3 dioxygenase 7 308 6.5E-109 T 13-10-2018 IPR017624 Catechol 2,3 dioxygenase GO:0008198|GO:0018577|GO:0019439|GO:0055114 KEGG: 00361+1.13.11.2|KEGG: 00362+1.13.11.2|KEGG: 00622+1.13.11.2|KEGG: 00643+1.13.11.2|MetaCyc: PWY-5419|MetaCyc: PWY-5641 TREPR_1326 3895b3dae1cab9b3f38da18cde57a4bd 308 Gene3D G3DSA:3.10.180.10 151 308 5.0E-35 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Pfam PF13181 Tetratricopeptide repeat 292 317 0.032 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Pfam PF13181 Tetratricopeptide repeat 407 435 0.0014 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SMART SM00028 371 404 2.0E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SMART SM00028 256 289 8.3E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SMART SM00028 291 324 0.35 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SMART SM00028 184 217 5.3E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SMART SM00028 119 152 1.5E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SMART SM00028 153 183 13.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SMART SM00028 218 251 0.069 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SMART SM00028 406 439 0.0014 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Pfam PF13414 TPR repeat 129 160 1.6E-9 T 13-10-2018 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Pfam PF00515 Tetratricopeptide repeat 257 288 6.4E-10 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Pfam PF13432 Tetratricopeptide repeat 191 244 3.5E-5 T 13-10-2018 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Pfam PF07719 Tetratricopeptide repeat 371 404 3.9E-6 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SUPERFAMILY SSF48452 163 404 4.74E-47 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 SUPERFAMILY SSF48452 52 220 1.84E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Gene3D G3DSA:1.25.40.10 347 448 3.7E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Gene3D G3DSA:1.25.40.10 253 336 2.1E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Gene3D G3DSA:1.25.40.10 163 252 1.0E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3863 0280d2f74e1a27d88f0469f226bfeba7 450 Gene3D G3DSA:1.25.40.10 100 162 5.5E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0684 87921d71f625d84510d18604015f900a 461 Pfam PF00158 Sigma-54 interaction domain 139 305 1.6E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TREPR_0684 87921d71f625d84510d18604015f900a 461 SUPERFAMILY SSF52540 138 378 2.78E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0684 87921d71f625d84510d18604015f900a 461 Gene3D G3DSA:3.40.50.2300 1 134 8.2E-34 T 13-10-2018 TREPR_0684 87921d71f625d84510d18604015f900a 461 Pfam PF00072 Response regulator receiver domain 4 111 2.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0684 87921d71f625d84510d18604015f900a 461 SUPERFAMILY SSF52172 1 184 7.12E-40 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0684 87921d71f625d84510d18604015f900a 461 Pfam PF02954 Bacterial regulatory protein, Fis family 416 455 9.5E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_0684 87921d71f625d84510d18604015f900a 461 Gene3D G3DSA:1.10.8.60 310 373 1.6E-18 T 13-10-2018 TREPR_0684 87921d71f625d84510d18604015f900a 461 Gene3D G3DSA:3.40.50.300 135 309 3.0E-60 T 13-10-2018 TREPR_0684 87921d71f625d84510d18604015f900a 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TREPR_0684 87921d71f625d84510d18604015f900a 461 SMART SM00448 2 113 3.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0684 87921d71f625d84510d18604015f900a 461 SUPERFAMILY SSF46689 348 457 1.08E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_0684 87921d71f625d84510d18604015f900a 461 SMART SM00382 159 302 1.6E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0684 87921d71f625d84510d18604015f900a 461 Gene3D G3DSA:1.10.10.60 406 460 2.6E-12 T 13-10-2018 TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 Pfam PF13361 UvrD-like helicase C-terminal domain 805 906 1.8E-16 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 SUPERFAMILY SSF52540 7 909 3.45E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 SUPERFAMILY SSF52980 1086 1237 9.65E-11 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 Gene3D G3DSA:3.40.50.300 339 484 7.4E-32 T 13-10-2018 TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 Gene3D G3DSA:3.90.320.10 1080 1254 8.0E-12 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 Gene3D G3DSA:3.40.50.300 569 669 9.6E-17 T 13-10-2018 TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 Pfam PF13361 UvrD-like helicase C-terminal domain 569 668 1.4E-7 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 457 2.8E-53 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 Gene3D G3DSA:3.40.50.300 2 162 4.8E-29 T 13-10-2018 TREPR_3796 4cb7c25af4bf95e26f68ca3377b23232 1269 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1088 1249 9.4E-10 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 SUPERFAMILY SSF47384 148 218 1.37E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 Gene3D G3DSA:3.40.50.12740 405 570 3.2E-36 T 13-10-2018 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 Pfam PF00072 Response regulator receiver domain 407 521 1.5E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 Pfam PF00072 Response regulator receiver domain 21 131 3.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 Gene3D G3DSA:3.30.565.10 224 384 1.2E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 SMART SM00448 405 524 2.1E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 SMART SM00448 19 131 5.1E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 SMART SM00388 157 222 4.4E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 Gene3D G3DSA:1.10.287.130 148 223 4.2E-26 T 13-10-2018 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 SMART SM00387 269 384 4.4E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 SUPERFAMILY SSF52172 21 158 1.71E-34 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 SUPERFAMILY SSF52172 404 529 1.85E-31 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 269 382 9.0E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 Gene3D G3DSA:1.20.120.160 571 673 2.6E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 SUPERFAMILY SSF47226 507 662 2.22E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 SUPERFAMILY SSF55874 211 385 5.5E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 Pfam PF00512 His Kinase A (phospho-acceptor) domain 157 222 2.2E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 Gene3D G3DSA:3.40.50.2300 7 147 2.9E-32 T 13-10-2018 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 337 3.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 323 3.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 362 3.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3057 12eb66aeeabddb6e83cf403a8342187f 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 381 3.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_3308 6d1280ed784e986ec502bf8d8cca4c02 234 SUPERFAMILY SSF46565 2 111 2.49E-19 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_3308 6d1280ed784e986ec502bf8d8cca4c02 234 PRINTS PR00625 DnaJ domain signature 5 23 8.4E-15 T 13-10-2018 IPR001623 DnaJ domain TREPR_3308 6d1280ed784e986ec502bf8d8cca4c02 234 PRINTS PR00625 DnaJ domain signature 23 38 8.4E-15 T 13-10-2018 IPR001623 DnaJ domain TREPR_3308 6d1280ed784e986ec502bf8d8cca4c02 234 PRINTS PR00625 DnaJ domain signature 40 60 8.4E-15 T 13-10-2018 IPR001623 DnaJ domain TREPR_3308 6d1280ed784e986ec502bf8d8cca4c02 234 SMART SM00271 2 60 6.8E-24 T 13-10-2018 IPR001623 DnaJ domain TREPR_3308 6d1280ed784e986ec502bf8d8cca4c02 234 Pfam PF00226 DnaJ domain 3 58 5.0E-18 T 13-10-2018 IPR001623 DnaJ domain TREPR_3308 6d1280ed784e986ec502bf8d8cca4c02 234 SUPERFAMILY SSF48452 121 193 6.03E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3308 6d1280ed784e986ec502bf8d8cca4c02 234 Gene3D G3DSA:1.25.40.10 111 198 7.1E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3308 6d1280ed784e986ec502bf8d8cca4c02 234 Gene3D G3DSA:1.10.287.110 1 84 5.0E-19 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_2745 bb2cd01b65ba9da211e5ff74355c13e3 152 SUPERFAMILY SSF109604 28 138 8.22E-17 T 13-10-2018 TREPR_2745 bb2cd01b65ba9da211e5ff74355c13e3 152 Pfam PF01966 HD domain 34 137 5.4E-7 T 13-10-2018 IPR006674 HD domain TREPR_2745 bb2cd01b65ba9da211e5ff74355c13e3 152 Gene3D G3DSA:1.10.3210.10 24 150 2.1E-10 T 13-10-2018 TREPR_2745 bb2cd01b65ba9da211e5ff74355c13e3 152 SMART SM00471 30 149 9.2E-4 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_0039 ac9daa331c88dee644517ad94bf578f4 396 Gene3D G3DSA:2.30.40.20 11 68 2.3E-28 T 13-10-2018 TREPR_0039 ac9daa331c88dee644517ad94bf578f4 396 Hamap MF_01113 DNA polymerase IV [dinB]. 1 353 33.374 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 TREPR_0039 ac9daa331c88dee644517ad94bf578f4 396 Gene3D G3DSA:3.30.1490.100 243 348 6.7E-22 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TREPR_0039 ac9daa331c88dee644517ad94bf578f4 396 Gene3D G3DSA:3.30.70.270 69 170 4.5E-31 T 13-10-2018 TREPR_0039 ac9daa331c88dee644517ad94bf578f4 396 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 344 3.3E-16 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TREPR_0039 ac9daa331c88dee644517ad94bf578f4 396 SUPERFAMILY SSF56672 3 231 2.67E-78 T 13-10-2018 TREPR_0039 ac9daa331c88dee644517ad94bf578f4 396 Pfam PF00817 impB/mucB/samB family 8 154 2.5E-47 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TREPR_0039 ac9daa331c88dee644517ad94bf578f4 396 SUPERFAMILY SSF100879 242 341 2.55E-21 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TREPR_0039 ac9daa331c88dee644517ad94bf578f4 396 Gene3D G3DSA:1.10.150.20 171 231 6.1E-15 T 13-10-2018 TREPR_0414 fd32a92affe7f3f5efb22837c013e05c 159 Pfam PF13151 Protein of unknown function (DUF3990) 1 149 2.3E-45 T 13-10-2018 IPR025051 Protein of unknown function DUF3990 TREPR_0477 69bd862780d102d5e16fd0f2d5be5e6e 332 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0477 69bd862780d102d5e16fd0f2d5be5e6e 332 SMART SM00382 40 239 2.8E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0477 69bd862780d102d5e16fd0f2d5be5e6e 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 305 7.1E-22 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0477 69bd862780d102d5e16fd0f2d5be5e6e 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 9.0E-28 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0477 69bd862780d102d5e16fd0f2d5be5e6e 332 Pfam PF00005 ABC transporter 32 189 1.9E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0477 69bd862780d102d5e16fd0f2d5be5e6e 332 SUPERFAMILY SSF52540 39 313 2.09E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0477 69bd862780d102d5e16fd0f2d5be5e6e 332 Gene3D G3DSA:3.40.50.300 9 331 2.0E-98 T 13-10-2018 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 697 5.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 716 5.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 658 5.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 Gene3D G3DSA:1.10.287.130 454 552 3.6E-25 T 13-10-2018 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 SMART SM00448 757 868 3.4E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 Pfam PF00072 Response regulator receiver domain 759 867 5.8E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 717 3.1E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 SUPERFAMILY SSF47226 920 1046 7.51E-10 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 SUPERFAMILY SSF55874 543 715 1.09E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 Gene3D G3DSA:1.20.120.160 922 1045 4.4E-6 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 SMART SM00388 488 554 4.9E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 SUPERFAMILY SSF47384 474 555 1.96E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 Gene3D G3DSA:3.30.565.10 553 719 2.6E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 Pfam PF07695 7TM diverse intracellular signalling 225 358 5.4E-10 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 SUPERFAMILY SSF52172 757 875 1.05E-30 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 Pfam PF00512 His Kinase A (phospho-acceptor) domain 488 554 5.7E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 Gene3D G3DSA:3.40.50.2300 753 885 8.0E-32 T 13-10-2018 TREPR_2301 ac37c24d3ddc38f160c90bc2dbe2b7c6 1054 SMART SM00387 601 719 6.1E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2913 b2a377776a7c3259e816a27253746afe 272 Pfam PF03630 Fumble 100 228 4.9E-21 T 13-10-2018 IPR004567 Type II pantothenate kinase GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: R-HSA-196783 TREPR_2913 b2a377776a7c3259e816a27253746afe 272 Gene3D G3DSA:3.30.420.40 3 264 6.9E-63 T 13-10-2018 TREPR_2913 b2a377776a7c3259e816a27253746afe 272 Gene3D G3DSA:3.30.420.40 82 253 6.9E-63 T 13-10-2018 TREPR_2913 b2a377776a7c3259e816a27253746afe 272 SUPERFAMILY SSF53067 1 266 3.61E-43 T 13-10-2018 TREPR_3164 bece6395d87b541f92239ac6aecdaa8a 203 SMART SM00421 147 203 1.8E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3164 bece6395d87b541f92239ac6aecdaa8a 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 200 1.4E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3164 bece6395d87b541f92239ac6aecdaa8a 203 SMART SM00448 2 122 4.3E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3164 bece6395d87b541f92239ac6aecdaa8a 203 SUPERFAMILY SSF46894 138 200 1.97E-13 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_3164 bece6395d87b541f92239ac6aecdaa8a 203 SUPERFAMILY SSF52172 1 136 4.98E-22 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3164 bece6395d87b541f92239ac6aecdaa8a 203 Pfam PF00072 Response regulator receiver domain 5 122 4.8E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3164 bece6395d87b541f92239ac6aecdaa8a 203 Gene3D G3DSA:3.40.50.12740 3 203 2.1E-42 T 13-10-2018 TREPR_1630 da5e09cbdc2fa14a9ccf2a66c890adbe 390 SUPERFAMILY SSF54631 28 140 8.02E-6 T 13-10-2018 TREPR_1630 da5e09cbdc2fa14a9ccf2a66c890adbe 390 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 193 389 1.1E-23 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_1630 da5e09cbdc2fa14a9ccf2a66c890adbe 390 SMART SM00331 166 389 1.7E-20 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_1630 da5e09cbdc2fa14a9ccf2a66c890adbe 390 Gene3D G3DSA:3.60.40.10 135 388 5.8E-36 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_3618 e21ec03a6a41d324bb49472f11829227 373 Pfam PF01497 Periplasmic binding protein 112 304 3.2E-22 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain TREPR_3618 e21ec03a6a41d324bb49472f11829227 373 SUPERFAMILY SSF53807 51 362 2.59E-44 T 13-10-2018 TREPR_3618 e21ec03a6a41d324bb49472f11829227 373 Gene3D G3DSA:3.40.50.1980 35 371 2.9E-64 T 13-10-2018 TREPR_0916 a3485bee35bdea112d6a7cf33e6a1765 464 SUPERFAMILY SSF53850 94 401 1.33E-19 T 13-10-2018 TREPR_0916 a3485bee35bdea112d6a7cf33e6a1765 464 Gene3D G3DSA:3.40.190.10 83 462 2.8E-23 T 13-10-2018 TREPR_1102 a32ed968f301a7fc880200c89cb0b01e 600 SUPERFAMILY SSF49899 203 358 3.48E-12 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily TREPR_1102 a32ed968f301a7fc880200c89cb0b01e 600 Gene3D G3DSA:2.60.120.200 201 374 2.4E-12 T 13-10-2018 TREPR_1102 a32ed968f301a7fc880200c89cb0b01e 600 Pfam PF00041 Fibronectin type III domain 499 579 1.4E-6 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_1102 a32ed968f301a7fc880200c89cb0b01e 600 SMART SM00060 497 580 6.2E-6 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_1102 a32ed968f301a7fc880200c89cb0b01e 600 SUPERFAMILY SSF49265 493 580 5.13E-12 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TREPR_1102 a32ed968f301a7fc880200c89cb0b01e 600 Gene3D G3DSA:2.60.40.10 496 593 5.5E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1102 a32ed968f301a7fc880200c89cb0b01e 600 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 210 356 2.1E-10 T 13-10-2018 TREPR_2754 c18135cebad6875e6358c8590b0078d0 331 Gene3D G3DSA:1.10.10.2830 150 263 5.4E-37 T 13-10-2018 TREPR_2754 c18135cebad6875e6358c8590b0078d0 331 Pfam PF02195 ParB-like nuclease domain 75 162 1.2E-24 T 13-10-2018 IPR003115 ParB/Sulfiredoxin TREPR_2754 c18135cebad6875e6358c8590b0078d0 331 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 70 248 8.6E-50 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TREPR_2754 c18135cebad6875e6358c8590b0078d0 331 Gene3D G3DSA:3.90.1530.30 86 148 2.2E-24 T 13-10-2018 TREPR_2754 c18135cebad6875e6358c8590b0078d0 331 SUPERFAMILY SSF109709 155 264 5.23E-32 T 13-10-2018 TREPR_2754 c18135cebad6875e6358c8590b0078d0 331 SUPERFAMILY SSF110849 73 165 7.06E-27 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TREPR_2754 c18135cebad6875e6358c8590b0078d0 331 SMART SM00470 73 163 5.1E-33 T 13-10-2018 IPR003115 ParB/Sulfiredoxin TREPR_1172 3d16d8170112449d9cf4c37abaa359cb 285 Pfam PF01875 Memo-like protein 15 252 2.0E-27 T 13-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 TREPR_1172 3d16d8170112449d9cf4c37abaa359cb 285 Gene3D G3DSA:3.40.830.10 12 263 1.4E-32 T 13-10-2018 TREPR_1172 3d16d8170112449d9cf4c37abaa359cb 285 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 13 262 4.2E-46 T 13-10-2018 TREPR_2573 515da04d185fd3c224859cafb9390fa6 359 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 358 1.8E-122 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2573 515da04d185fd3c224859cafb9390fa6 359 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2573 515da04d185fd3c224859cafb9390fa6 359 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 357 24.467 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2573 515da04d185fd3c224859cafb9390fa6 359 Pfam PF00953 Glycosyl transferase family 4 99 283 3.3E-38 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 TREPR_2573 515da04d185fd3c224859cafb9390fa6 359 ProSitePatterns PS01348 MraY family signature 2. 188 199 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2573 515da04d185fd3c224859cafb9390fa6 359 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 8.1E-5 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2768 0f27dcff03e5a0017020f78f7f644bb6 110 Gene3D G3DSA:1.20.120.910 1 110 1.4E-28 T 13-10-2018 TREPR_2768 0f27dcff03e5a0017020f78f7f644bb6 110 SUPERFAMILY SSF109635 4 72 1.29E-7 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily TREPR_2768 0f27dcff03e5a0017020f78f7f644bb6 110 SUPERFAMILY SSF57716 74 109 1.35E-9 T 13-10-2018 TREPR_2768 0f27dcff03e5a0017020f78f7f644bb6 110 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 72 107 5.5E-11 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TREPR_2768 0f27dcff03e5a0017020f78f7f644bb6 110 PRINTS PR00618 DksA/TraR zinc finger signature 89 101 7.1E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria TREPR_2768 0f27dcff03e5a0017020f78f7f644bb6 110 PRINTS PR00618 DksA/TraR zinc finger signature 77 88 7.1E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria TREPR_1041 e79c332d5ff8a4c7121a6175440e339a 208 Gene3D G3DSA:3.40.109.10 20 205 4.6E-48 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_1041 e79c332d5ff8a4c7121a6175440e339a 208 SUPERFAMILY SSF55469 24 198 1.02E-42 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_1041 e79c332d5ff8a4c7121a6175440e339a 208 Pfam PF00881 Nitroreductase family 31 188 1.7E-33 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 Gene3D G3DSA:1.10.8.60 304 372 6.5E-25 T 13-10-2018 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 202 216 1.0E-43 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 269 296 1.0E-43 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 234 248 1.0E-43 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 171 191 1.0E-43 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 432 451 1.0E-43 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 SUPERFAMILY SSF52540 138 349 9.0E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 383 451 1.8E-30 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 SMART SM00382 170 302 2.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 Gene3D G3DSA:1.10.1750.10 373 476 6.9E-34 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 Pfam PF00308 Bacterial dnaA protein 138 353 9.9E-88 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 SUPERFAMILY SSF48295 369 474 1.46E-35 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 10 471 6.8E-157 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 Pfam PF11638 DnaA N-terminal domain 9 64 5.6E-9 T 13-10-2018 IPR024633 DnaA N-terminal domain TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 SMART SM00760 382 451 2.5E-39 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 Gene3D G3DSA:3.40.50.300 137 303 2.6E-48 T 13-10-2018 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 ProSitePatterns PS01008 DnaA protein signature. 432 451 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 7 473 30.616 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TREPR_0277 881f00f18f73dec1a6fad74730122b59 479 Gene3D G3DSA:3.30.300.180 4 83 1.3E-14 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily TREPR_3772 4e294edb37508ce813f2ffbc5420ecd9 156 SUPERFAMILY SSF47188 4 134 2.35E-29 T 13-10-2018 IPR035938 Hemerythrin-like superfamily TREPR_3772 4e294edb37508ce813f2ffbc5420ecd9 156 Pfam PF01814 Hemerythrin HHE cation binding domain 16 130 3.0E-9 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TREPR_3772 4e294edb37508ce813f2ffbc5420ecd9 156 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 8 134 1.3E-31 T 13-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 TREPR_3772 4e294edb37508ce813f2ffbc5420ecd9 156 Gene3D G3DSA:1.20.120.50 2 138 5.2E-34 T 13-10-2018 IPR035938 Hemerythrin-like superfamily TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 SUPERFAMILY SSF110997 297 366 1.44E-8 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 Pfam PF05036 Sporulation related domain 299 341 2.1E-7 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 PRINTS PR01217 Proline rich extensin signature 255 280 1.2E-9 T 13-10-2018 TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 PRINTS PR01217 Proline rich extensin signature 219 236 1.2E-9 T 13-10-2018 TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 PRINTS PR01217 Proline rich extensin signature 174 195 1.2E-9 T 13-10-2018 TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 PRINTS PR01217 Proline rich extensin signature 123 135 1.2E-9 T 13-10-2018 TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 PRINTS PR01217 Proline rich extensin signature 140 156 1.2E-9 T 13-10-2018 TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 PRINTS PR01217 Proline rich extensin signature 161 173 1.2E-9 T 13-10-2018 TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 Gene3D G3DSA:3.30.70.1070 295 343 1.8E-5 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TREPR_3816 b60d17d35da92f1ed0e9e544116356ad 370 Gene3D G3DSA:2.40.40.10 23 107 2.2E-13 T 13-10-2018 IPR036908 RlpA-like domain superfamily TREPR_3351 c8602b55392e4f3d95fc39c0d503be68 68 SMART SM00966 4 49 4.3E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_3351 c8602b55392e4f3d95fc39c0d503be68 68 Gene3D G3DSA:2.10.260.10 1 41 2.1E-11 T 13-10-2018 TREPR_3351 c8602b55392e4f3d95fc39c0d503be68 68 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 43 2.1E-11 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_3351 c8602b55392e4f3d95fc39c0d503be68 68 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 32 5.6E-7 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_3351 c8602b55392e4f3d95fc39c0d503be68 68 SUPERFAMILY SSF89447 1 46 2.44E-11 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily TREPR_1639 0bc00c6167f3377f5f8e64a0e523c2a0 285 Pfam PF04754 Putative transposase, YhgA-like 65 196 3.0E-5 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like TREPR_2460 1d667da8ecf1f5c14c33735e9bad3639 409 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 178 393 2.6E-45 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TREPR_2460 1d667da8ecf1f5c14c33735e9bad3639 409 SMART SM00646 253 393 2.0E-26 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TREPR_2460 1d667da8ecf1f5c14c33735e9bad3639 409 Gene3D G3DSA:3.40.630.40 166 402 2.9E-57 T 13-10-2018 TREPR_2460 1d667da8ecf1f5c14c33735e9bad3639 409 SUPERFAMILY SSF53187 178 395 5.02E-41 T 13-10-2018 TREPR_1997 96458c9a09c9e978a79d32e3dd89e7d9 391 SUPERFAMILY SSF51206 7 106 2.09E-16 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like TREPR_1997 96458c9a09c9e978a79d32e3dd89e7d9 391 Gene3D G3DSA:2.60.120.10 152 287 2.5E-30 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_1997 96458c9a09c9e978a79d32e3dd89e7d9 391 SMART SM00100 157 276 1.1E-17 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_1997 96458c9a09c9e978a79d32e3dd89e7d9 391 SUPERFAMILY SSF51206 177 288 4.58E-28 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like TREPR_1997 96458c9a09c9e978a79d32e3dd89e7d9 391 Gene3D G3DSA:2.60.120.10 2 98 2.0E-18 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_1997 96458c9a09c9e978a79d32e3dd89e7d9 391 Pfam PF00027 Cyclic nucleotide-binding domain 178 261 2.4E-21 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_1997 96458c9a09c9e978a79d32e3dd89e7d9 391 Pfam PF00027 Cyclic nucleotide-binding domain 3 79 4.0E-12 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_1997 96458c9a09c9e978a79d32e3dd89e7d9 391 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 226 243 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 SMART SM00388 228 292 1.5E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 Gene3D G3DSA:1.10.287.130 214 290 2.2E-7 T 13-10-2018 TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 287 7.4E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 439 4.1E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 Gene3D G3DSA:3.30.565.10 304 448 3.2E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 SUPERFAMILY SSF55874 324 437 3.67E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 3.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 3.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 3.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 3.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 SMART SM00387 328 441 5.3E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0161 59ef85df17f31d44ed50bb4d727c60f9 449 SUPERFAMILY SSF47384 216 288 1.63E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 SMART SM00283 427 661 3.8E-19 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 Gene3D G3DSA:1.10.287.950 447 662 1.2E-35 T 13-10-2018 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 Gene3D G3DSA:1.10.15.40 358 416 3.5E-5 T 13-10-2018 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 Gene3D G3DSA:3.40.50.1780 33 210 7.5E-26 T 13-10-2018 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 Pfam PF12837 4Fe-4S binding domain 11 31 9.7E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 Gene3D G3DSA:3.40.950.10 89 231 7.5E-26 T 13-10-2018 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 50 280 2.0E-29 T 13-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 Gene3D G3DSA:3.30.70.20 13 32 7.5E-26 T 13-10-2018 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 484 635 8.0E-24 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 548 577 5.5E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 477 5.5E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 596 625 5.5E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 Pfam PF04060 Putative Fe-S cluster 374 402 2.2E-7 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 SUPERFAMILY SSF53920 17 313 1.23E-44 T 13-10-2018 IPR009016 Iron hydrogenase TREPR_1589 dee169982c3ca00aa20a299895f7b749 663 SUPERFAMILY SSF58104 420 658 6.02E-39 T 13-10-2018 TREPR_0188 81920b357bfe4e8bc1e27bbb10153c23 79 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 52 3.2E-5 T 13-10-2018 TREPR_0188 81920b357bfe4e8bc1e27bbb10153c23 79 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 53 4.9E-9 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TREPR_0188 81920b357bfe4e8bc1e27bbb10153c23 79 SUPERFAMILY SSF143120 1 49 1.24E-7 T 13-10-2018 IPR036165 YefM-like superfamily TREPR_2883 d04cc0f24cbdba3ba911e2943e84c3d7 428 Gene3D G3DSA:3.30.420.130 296 398 5.0E-18 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily TREPR_2883 d04cc0f24cbdba3ba911e2943e84c3d7 428 SUPERFAMILY SSF102114 24 266 1.05E-35 T 13-10-2018 TREPR_2883 d04cc0f24cbdba3ba911e2943e84c3d7 428 Pfam PF04055 Radical SAM superfamily 32 211 2.0E-19 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_2883 d04cc0f24cbdba3ba911e2943e84c3d7 428 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 32 43 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_2883 d04cc0f24cbdba3ba911e2943e84c3d7 428 SUPERFAMILY SSF53146 297 400 4.71E-20 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily TREPR_2883 d04cc0f24cbdba3ba911e2943e84c3d7 428 Pfam PF13394 4Fe-4S single cluster domain 34 127 2.9E-5 T 13-10-2018 TREPR_2883 d04cc0f24cbdba3ba911e2943e84c3d7 428 Gene3D G3DSA:3.20.20.70 20 290 1.5E-31 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2883 d04cc0f24cbdba3ba911e2943e84c3d7 428 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 310 388 7.9E-10 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis TREPR_2900 b0f6c1f590bce24df8defa9d997eeeaf 207 SUPERFAMILY SSF47644 4 77 2.35E-9 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2900 b0f6c1f590bce24df8defa9d997eeeaf 207 Pfam PF02310 B12 binding domain 87 180 7.6E-21 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_2900 b0f6c1f590bce24df8defa9d997eeeaf 207 SMART SM01018 1 80 3.2E-7 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2900 b0f6c1f590bce24df8defa9d997eeeaf 207 Pfam PF02607 B12 binding domain 4 66 1.4E-8 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2900 b0f6c1f590bce24df8defa9d997eeeaf 207 Gene3D G3DSA:1.10.1240.10 2 74 1.2E-14 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_2900 b0f6c1f590bce24df8defa9d997eeeaf 207 Gene3D G3DSA:3.40.50.280 75 206 1.5E-39 T 13-10-2018 TREPR_2900 b0f6c1f590bce24df8defa9d997eeeaf 207 SUPERFAMILY SSF52242 80 204 1.14E-35 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_1632 ea140712ce7d4d4a5b0eb7fcbaa3df2d 391 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 195 390 9.7E-11 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_1632 ea140712ce7d4d4a5b0eb7fcbaa3df2d 391 SMART SM00331 167 390 0.0017 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_1632 ea140712ce7d4d4a5b0eb7fcbaa3df2d 391 Pfam PF00571 CBS domain 27 68 0.0057 T 13-10-2018 IPR000644 CBS domain TREPR_1632 ea140712ce7d4d4a5b0eb7fcbaa3df2d 391 Gene3D G3DSA:3.60.40.10 135 389 1.6E-27 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_3264 d56ad0667e3f7158ab54fccf69a80cab 377 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 61 191 4.7E-64 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 TREPR_3264 d56ad0667e3f7158ab54fccf69a80cab 377 SUPERFAMILY SSF52540 23 349 4.65E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3264 d56ad0667e3f7158ab54fccf69a80cab 377 Gene3D G3DSA:1.10.8.300 241 374 1.5E-34 T 13-10-2018 TREPR_3264 d56ad0667e3f7158ab54fccf69a80cab 377 Gene3D G3DSA:3.40.50.300 25 214 5.0E-49 T 13-10-2018 TREPR_3264 d56ad0667e3f7158ab54fccf69a80cab 377 PIRSF PIRSF002849 5 377 2.8E-127 T 13-10-2018 TREPR_1090 fbacccb0fb85eefa701f68b7840aaee4 192 Gene3D G3DSA:3.90.1570.10 5 188 6.2E-42 T 13-10-2018 TREPR_1090 fbacccb0fb85eefa701f68b7840aaee4 192 SUPERFAMILY SSF52980 11 187 3.49E-43 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_1090 fbacccb0fb85eefa701f68b7840aaee4 192 Pfam PF05685 Putative restriction endonuclease 17 183 6.8E-35 T 13-10-2018 IPR008538 Domain of unknown function DUF820 TREPR_0310 cdb05c2e8190fc80b97ed48961efde7f 467 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 104 6.2E-30 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain TREPR_0310 cdb05c2e8190fc80b97ed48961efde7f 467 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 445 5.8E-139 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 TREPR_0310 cdb05c2e8190fc80b97ed48961efde7f 467 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 467 126.913 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 TREPR_0310 cdb05c2e8190fc80b97ed48961efde7f 467 Gene3D G3DSA:1.10.1060.10 364 442 1.8E-7 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_0310 cdb05c2e8190fc80b97ed48961efde7f 467 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 415 426 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_0310 cdb05c2e8190fc80b97ed48961efde7f 467 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 282 1.3E-46 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0310 cdb05c2e8190fc80b97ed48961efde7f 467 Gene3D G3DSA:3.40.50.11540 136 291 9.7E-14 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0310 cdb05c2e8190fc80b97ed48961efde7f 467 SUPERFAMILY SSF142019 118 302 7.19E-51 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0310 cdb05c2e8190fc80b97ed48961efde7f 467 SUPERFAMILY SSF46548 334 443 3.27E-16 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_3283 5e2ff043610f031a2565abe648314490 587 Gene3D G3DSA:3.30.450.20 420 535 1.0E-5 T 13-10-2018 TREPR_3283 5e2ff043610f031a2565abe648314490 587 Gene3D G3DSA:3.30.70.20 17 62 6.7E-31 T 13-10-2018 TREPR_3283 5e2ff043610f031a2565abe648314490 587 Pfam PF04060 Putative Fe-S cluster 387 414 2.6E-6 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 TREPR_3283 5e2ff043610f031a2565abe648314490 587 SUPERFAMILY SSF53920 48 344 1.44E-46 T 13-10-2018 IPR009016 Iron hydrogenase TREPR_3283 5e2ff043610f031a2565abe648314490 587 Gene3D G3DSA:3.40.50.1780 63 239 6.7E-31 T 13-10-2018 TREPR_3283 5e2ff043610f031a2565abe648314490 587 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 80 314 1.8E-37 T 13-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TREPR_3283 5e2ff043610f031a2565abe648314490 587 SUPERFAMILY SSF54862 16 89 5.76E-11 T 13-10-2018 TREPR_3283 5e2ff043610f031a2565abe648314490 587 Gene3D G3DSA:3.40.950.10 121 171 6.7E-31 T 13-10-2018 TREPR_3283 5e2ff043610f031a2565abe648314490 587 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 19 30 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_0202 fedc2f5c167d31d7ceb561e16cdec901 300 Pfam PF04321 RmlD substrate binding domain 4 294 1.1E-50 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 TREPR_0202 fedc2f5c167d31d7ceb561e16cdec901 300 SUPERFAMILY SSF51735 3 294 2.29E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0202 fedc2f5c167d31d7ceb561e16cdec901 300 Gene3D G3DSA:3.40.50.720 1 296 1.3E-64 T 13-10-2018 TREPR_0498 803a8180cca81459669ccefabe533c28 407 Gene3D G3DSA:3.40.50.150 174 399 7.9E-94 T 13-10-2018 TREPR_0498 803a8180cca81459669ccefabe533c28 407 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 209 220 - T 13-10-2018 IPR000241 Putative RNA methylase domain TREPR_0498 803a8180cca81459669ccefabe533c28 407 SUPERFAMILY SSF53335 161 401 3.0E-29 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0498 803a8180cca81459669ccefabe533c28 407 Pfam PF02926 THUMP domain 47 162 1.9E-4 T 13-10-2018 IPR004114 THUMP domain GO:0003723 TREPR_0498 803a8180cca81459669ccefabe533c28 407 Pfam PF01170 Putative RNA methylase family UPF0020 176 288 2.3E-26 T 13-10-2018 IPR000241 Putative RNA methylase domain TREPR_0498 803a8180cca81459669ccefabe533c28 407 Pfam PF01170 Putative RNA methylase family UPF0020 327 398 2.9E-10 T 13-10-2018 IPR000241 Putative RNA methylase domain TREPR_0498 803a8180cca81459669ccefabe533c28 407 SMART SM00981 70 168 6.1E-4 T 13-10-2018 IPR004114 THUMP domain GO:0003723 TREPR_0498 803a8180cca81459669ccefabe533c28 407 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 334 340 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_0498 803a8180cca81459669ccefabe533c28 407 Gene3D G3DSA:3.30.2130.30 8 259 7.9E-94 T 13-10-2018 TREPR_3664 bfdc7556a854dcae26f6d2ca03874f12 319 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3664 bfdc7556a854dcae26f6d2ca03874f12 319 Pfam PF00005 ABC transporter 30 178 7.9E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3664 bfdc7556a854dcae26f6d2ca03874f12 319 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 297 2.3E-14 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_3664 bfdc7556a854dcae26f6d2ca03874f12 319 SMART SM00382 38 228 1.7E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3664 bfdc7556a854dcae26f6d2ca03874f12 319 SUPERFAMILY SSF52540 4 250 6.31E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3664 bfdc7556a854dcae26f6d2ca03874f12 319 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 317 2.1E-26 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_3664 bfdc7556a854dcae26f6d2ca03874f12 319 Gene3D G3DSA:3.40.50.300 1 319 6.9E-96 T 13-10-2018 TREPR_1411 ec0746cdd8aeab6ee468d77268918c68 81 SUPERFAMILY SSF47598 4 67 5.56E-7 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 Gene3D G3DSA:1.25.40.10 134 206 2.7E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SUPERFAMILY SSF48452 30 148 3.45E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SUPERFAMILY SSF81901 141 370 3.14E-31 T 13-10-2018 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 Gene3D G3DSA:1.25.40.10 3 133 1.6E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 Pfam PF14559 Tetratricopeptide repeat 79 134 3.6E-8 T 13-10-2018 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 Pfam PF14559 Tetratricopeptide repeat 318 364 8.7E-7 T 13-10-2018 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 Gene3D G3DSA:1.25.40.10 307 383 1.1E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 Gene3D G3DSA:1.25.40.10 207 306 1.8E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SMART SM00028 306 339 11.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SMART SM00028 273 304 68.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SMART SM00028 67 100 4.6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SMART SM00028 239 272 0.13 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SMART SM00028 101 134 2.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SMART SM00028 135 168 25.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SMART SM00028 33 66 11.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SMART SM00028 169 202 32.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 SMART SM00028 205 238 0.05 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 Pfam PF13174 Tetratricopeptide repeat 240 271 0.05 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 Pfam PF13181 Tetratricopeptide repeat 276 304 1.8E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1725 8538e2f7224f35fce846e885379a54fe 385 Pfam PF13181 Tetratricopeptide repeat 206 236 0.066 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_0118 0b557e772eeada0ca4faf973baa628bc 422 SUPERFAMILY SSF53850 34 422 5.44E-50 T 13-10-2018 TREPR_0118 0b557e772eeada0ca4faf973baa628bc 422 Pfam PF01547 Bacterial extracellular solute-binding protein 57 336 3.1E-23 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_0118 0b557e772eeada0ca4faf973baa628bc 422 Gene3D G3DSA:3.40.190.10 32 422 1.3E-54 T 13-10-2018 TREPR_0901 fe635f7fdc471fb292fd348112402aa2 207 Gene3D G3DSA:2.10.109.10 84 207 1.6E-16 T 13-10-2018 TREPR_0901 fe635f7fdc471fb292fd348112402aa2 207 SUPERFAMILY SSF51306 83 205 1.73E-18 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TREPR_0901 fe635f7fdc471fb292fd348112402aa2 207 SUPERFAMILY SSF47413 10 69 1.36E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0901 fe635f7fdc471fb292fd348112402aa2 207 Pfam PF00717 Peptidase S24-like 120 188 2.3E-5 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TREPR_0901 fe635f7fdc471fb292fd348112402aa2 207 Gene3D G3DSA:1.10.260.40 5 83 3.4E-6 T 13-10-2018 TREPR_2629 2906433ea985abdc45b9cba7cebbbe78 285 Pfam PF04383 KilA-N domain 25 151 3.6E-24 T 13-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TREPR_2629 2906433ea985abdc45b9cba7cebbbe78 285 SMART SM01252 22 152 1.2E-55 T 13-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TREPR_2124 bcd591420cf78f092a9b3d54ead3945f 493 Pfam PF08323 Starch synthase catalytic domain 2 244 2.3E-69 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TREPR_2124 bcd591420cf78f092a9b3d54ead3945f 493 Gene3D G3DSA:3.40.50.2000 258 471 1.1E-164 T 13-10-2018 TREPR_2124 bcd591420cf78f092a9b3d54ead3945f 493 Pfam PF00534 Glycosyl transferases group 1 299 433 4.0E-8 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_2124 bcd591420cf78f092a9b3d54ead3945f 493 Gene3D G3DSA:3.40.50.2000 3 485 1.1E-164 T 13-10-2018 TREPR_2124 bcd591420cf78f092a9b3d54ead3945f 493 SUPERFAMILY SSF53756 3 489 7.33E-106 T 13-10-2018 TREPR_2124 bcd591420cf78f092a9b3d54ead3945f 493 Hamap MF_00484 Glycogen synthase [glgA]. 1 487 39.308 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TREPR_2124 bcd591420cf78f092a9b3d54ead3945f 493 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 486 3.7E-152 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 SUPERFAMILY SSF55347 169 331 5.89E-35 T 13-10-2018 TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 Gene3D G3DSA:3.30.360.10 162 357 1.2E-106 T 13-10-2018 TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 337 353 8.2E-5 T 13-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 38 51 8.2E-5 T 13-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 151 165 8.2E-5 T 13-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 SUPERFAMILY SSF51735 25 188 6.54E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 40 368 4.2E-143 T 13-10-2018 IPR030827 Inositol 2-dehydrogenase TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 40 161 1.8E-26 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 Gene3D G3DSA:3.40.50.720 40 343 1.2E-106 T 13-10-2018 TREPR_0399 4c0f1fc660fd8db3637e28e8641260c4 376 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 179 276 9.0E-7 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 TREPR_1321 60547c521f5a679488de249f2ce3c335 274 SUPERFAMILY SSF53474 10 272 1.88E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1321 60547c521f5a679488de249f2ce3c335 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 6.1E-29 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_1321 60547c521f5a679488de249f2ce3c335 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 6.1E-29 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_1321 60547c521f5a679488de249f2ce3c335 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 6.1E-29 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_1321 60547c521f5a679488de249f2ce3c335 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 6.1E-29 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_1321 60547c521f5a679488de249f2ce3c335 274 Gene3D G3DSA:3.40.50.1820 4 274 1.6E-92 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1321 60547c521f5a679488de249f2ce3c335 274 PRINTS PR00412 Epoxide hydrolase signature 115 128 1.2E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TREPR_1321 60547c521f5a679488de249f2ce3c335 274 PRINTS PR00412 Epoxide hydrolase signature 56 71 1.2E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TREPR_1321 60547c521f5a679488de249f2ce3c335 274 PRINTS PR00412 Epoxide hydrolase signature 101 114 1.2E-5 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 TREPR_1321 60547c521f5a679488de249f2ce3c335 274 Pfam PF00561 alpha/beta hydrolase fold 32 131 4.0E-20 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_1321 60547c521f5a679488de249f2ce3c335 274 Pfam PF00561 alpha/beta hydrolase fold 163 260 4.0E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_3849 a2ecf5f30268da29f6753481e7582eb3 280 Gene3D G3DSA:3.30.1360.170 9 246 7.8E-73 T 13-10-2018 TREPR_3849 a2ecf5f30268da29f6753481e7582eb3 280 Pfam PF02511 Thymidylate synthase complementing protein 26 225 4.3E-53 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TREPR_3849 a2ecf5f30268da29f6753481e7582eb3 280 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 24 231 1.3E-62 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TREPR_3849 a2ecf5f30268da29f6753481e7582eb3 280 SUPERFAMILY SSF69796 15 240 2.48E-67 T 13-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TREPR_3849 a2ecf5f30268da29f6753481e7582eb3 280 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 20 239 29.989 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 TREPR_3221 d6db611c221e5496ec79e776b85cacb3 356 SMART SM00382 25 216 1.1E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3221 d6db611c221e5496ec79e776b85cacb3 356 SUPERFAMILY SSF52540 3 233 2.0E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3221 d6db611c221e5496ec79e776b85cacb3 356 Pfam PF00005 ABC transporter 19 158 1.5E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3221 d6db611c221e5496ec79e776b85cacb3 356 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3221 d6db611c221e5496ec79e776b85cacb3 356 Gene3D G3DSA:3.40.50.300 1 234 8.4E-68 T 13-10-2018 TREPR_0573 7a9c44768371c42b33f7da6845cf6f56 285 SUPERFAMILY SSF69572 6 260 1.7E-54 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TREPR_0573 7a9c44768371c42b33f7da6845cf6f56 285 Pfam PF00899 ThiF family 9 174 2.5E-34 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TREPR_0573 7a9c44768371c42b33f7da6845cf6f56 285 Gene3D G3DSA:3.40.50.720 2 266 2.8E-74 T 13-10-2018 TREPR_2904 0cc8806f6e5f4da08e3bcd61cd65cfcd 306 Pfam PF12784 PD-(D/E)XK nuclease family transposase 33 261 1.7E-16 T 13-10-2018 TREPR_0430 0372f4ac4410a913d429503fc3891cc0 267 SUPERFAMILY SSF52540 17 254 6.39E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0430 0372f4ac4410a913d429503fc3891cc0 267 SMART SM00382 46 241 8.3E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0430 0372f4ac4410a913d429503fc3891cc0 267 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0430 0372f4ac4410a913d429503fc3891cc0 267 Gene3D G3DSA:3.40.50.300 12 244 5.1E-65 T 13-10-2018 TREPR_0430 0372f4ac4410a913d429503fc3891cc0 267 Pfam PF00005 ABC transporter 37 178 2.0E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1832 f7d3ed8fb71e5536529480ca8711657f 817 Gene3D G3DSA:3.40.50.300 39 261 7.2E-44 T 13-10-2018 TREPR_1832 f7d3ed8fb71e5536529480ca8711657f 817 Gene3D G3DSA:3.40.50.300 286 448 8.6E-23 T 13-10-2018 TREPR_1832 f7d3ed8fb71e5536529480ca8711657f 817 SMART SM00490 327 409 5.1E-19 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1832 f7d3ed8fb71e5536529480ca8711657f 817 Pfam PF09369 Domain of unknown function (DUF1998) 718 794 6.1E-17 T 13-10-2018 IPR018973 DEAD/DEAH-box helicase, putative TREPR_1832 f7d3ed8fb71e5536529480ca8711657f 817 Pfam PF00271 Helicase conserved C-terminal domain 300 409 2.2E-13 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1832 f7d3ed8fb71e5536529480ca8711657f 817 Pfam PF00270 DEAD/DEAH box helicase 60 243 1.4E-22 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_1832 f7d3ed8fb71e5536529480ca8711657f 817 SUPERFAMILY SSF52540 64 417 3.03E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1832 f7d3ed8fb71e5536529480ca8711657f 817 SMART SM00487 53 273 6.8E-29 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_0971 e05f4b1c7378a17f0ab329fe533b64cb 127 Gene3D G3DSA:2.60.320.10 29 123 1.4E-18 T 13-10-2018 IPR038690 NusG, domain 2 superfamily TREPR_0971 e05f4b1c7378a17f0ab329fe533b64cb 127 Pfam PF07009 NusG domain II 20 115 2.1E-17 T 13-10-2018 IPR024045 NusG, domain 2 TREPR_0279 739ae402d9017dd75395eae483057054 635 Pfam PF00204 DNA gyrase B 221 390 4.6E-61 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_0279 739ae402d9017dd75395eae483057054 635 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR00418 DNA topoisomerase II family signature 420 434 2.1E-71 T 13-10-2018 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR00418 DNA topoisomerase II family signature 268 281 2.1E-71 T 13-10-2018 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR00418 DNA topoisomerase II family signature 69 82 2.1E-71 T 13-10-2018 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR00418 DNA topoisomerase II family signature 486 502 2.1E-71 T 13-10-2018 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR00418 DNA topoisomerase II family signature 112 126 2.1E-71 T 13-10-2018 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR00418 DNA topoisomerase II family signature 504 521 2.1E-71 T 13-10-2018 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR00418 DNA topoisomerase II family signature 567 583 2.1E-71 T 13-10-2018 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR00418 DNA topoisomerase II family signature 34 49 2.1E-71 T 13-10-2018 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR00418 DNA topoisomerase II family signature 524 536 2.1E-71 T 13-10-2018 TREPR_0279 739ae402d9017dd75395eae483057054 635 SMART SM00387 30 174 2.1E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0279 739ae402d9017dd75395eae483057054 635 Gene3D G3DSA:3.30.230.10 220 398 7.8E-70 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_0279 739ae402d9017dd75395eae483057054 635 SUPERFAMILY SSF56719 394 625 2.04E-82 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TREPR_0279 739ae402d9017dd75395eae483057054 635 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 635 1.3E-290 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 563 624 2.2E-25 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 SUPERFAMILY SSF55874 5 213 3.01E-70 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0279 739ae402d9017dd75395eae483057054 635 Gene3D G3DSA:3.30.565.10 1 219 5.4E-86 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0279 739ae402d9017dd75395eae483057054 635 Pfam PF01751 Toprim domain 419 527 7.8E-17 T 13-10-2018 IPR006171 TOPRIM domain TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 5 15 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 360 374 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 374 394 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 604 620 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 312 328 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 588 600 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 220 242 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 179 194 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 194 207 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 PRINTS PR01159 DNA gyrase subunit B signature 470 479 5.9E-65 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 172 1.7E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0279 739ae402d9017dd75395eae483057054 635 Gene3D G3DSA:3.40.50.670 399 635 4.3E-98 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_0279 739ae402d9017dd75395eae483057054 635 SMART SM00433 34 628 0.0 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_0279 739ae402d9017dd75395eae483057054 635 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 635 85.525 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TREPR_0279 739ae402d9017dd75395eae483057054 635 SUPERFAMILY SSF54211 221 391 3.22E-57 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_3052 3b11335ebf0dbb888324e20b37c5981b 449 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 12 442 4.6E-172 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 TREPR_3052 3b11335ebf0dbb888324e20b37c5981b 449 PIRSF PIRSF000521 27 445 2.2E-41 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TREPR_3052 3b11335ebf0dbb888324e20b37c5981b 449 SUPERFAMILY SSF53383 7 442 8.61E-136 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3052 3b11335ebf0dbb888324e20b37c5981b 449 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 445 48.309 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 TREPR_3052 3b11335ebf0dbb888324e20b37c5981b 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TREPR_3052 3b11335ebf0dbb888324e20b37c5981b 449 Gene3D G3DSA:3.90.1150.10 8 440 4.3E-165 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3052 3b11335ebf0dbb888324e20b37c5981b 449 Pfam PF00202 Aminotransferase class-III 24 442 1.0E-130 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TREPR_3052 3b11335ebf0dbb888324e20b37c5981b 449 Gene3D G3DSA:3.40.640.10 62 339 4.3E-165 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_1841 e33f97570be5518d6e26a11dd93261e2 332 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 327 1.7E-109 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TREPR_1841 e33f97570be5518d6e26a11dd93261e2 332 Gene3D G3DSA:3.40.50.10750 143 304 2.1E-123 T 13-10-2018 TREPR_1841 e33f97570be5518d6e26a11dd93261e2 332 PIRSF PIRSF000428 1 332 3.8E-102 T 13-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TREPR_1841 e33f97570be5518d6e26a11dd93261e2 332 SUPERFAMILY SSF53659 1 329 1.11E-84 T 13-10-2018 TREPR_1841 e33f97570be5518d6e26a11dd93261e2 332 Gene3D G3DSA:3.40.50.10950 9 331 2.1E-123 T 13-10-2018 TREPR_1841 e33f97570be5518d6e26a11dd93261e2 332 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 328 1.5E-112 T 13-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 TREPR_3038 0a1cceeb208cd5c552e690502d7ce602 253 SUPERFAMILY SSF88713 1 250 1.31E-56 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TREPR_3038 0a1cceeb208cd5c552e690502d7ce602 253 Gene3D G3DSA:3.20.20.370 1 251 7.6E-59 T 13-10-2018 TREPR_3038 0a1cceeb208cd5c552e690502d7ce602 253 Pfam PF04794 YdjC-like protein 2 239 1.8E-47 T 13-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like TREPR_1079 fb0642959680085921f912777841fbc4 635 SMART SM01228 558 629 1.5E-32 T 13-10-2018 TREPR_1079 fb0642959680085921f912777841fbc4 635 Gene3D G3DSA:1.10.150.570 581 633 3.3E-20 T 13-10-2018 TREPR_1079 fb0642959680085921f912777841fbc4 635 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 287 301 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TREPR_1079 fb0642959680085921f912777841fbc4 635 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 172 5.0E-6 T 13-10-2018 TREPR_1079 fb0642959680085921f912777841fbc4 635 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.0E-6 T 13-10-2018 TREPR_1079 fb0642959680085921f912777841fbc4 635 SUPERFAMILY SSF51905 1 272 5.93E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_1079 fb0642959680085921f912777841fbc4 635 Gene3D G3DSA:3.50.50.60 310 472 1.5E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_1079 fb0642959680085921f912777841fbc4 635 Gene3D G3DSA:3.50.50.60 1 236 8.4E-80 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TREPR_1079 fb0642959680085921f912777841fbc4 635 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 382 405 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TREPR_1079 fb0642959680085921f912777841fbc4 635 Pfam PF01134 Glucose inhibited division protein A 4 411 1.1E-145 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 TREPR_1079 fb0642959680085921f912777841fbc4 635 Pfam PF13932 GidA associated domain 415 627 2.6E-65 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 TREPR_1079 fb0642959680085921f912777841fbc4 635 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3 633 3.0E-239 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TREPR_1079 fb0642959680085921f912777841fbc4 635 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 1 635 39.719 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 Gene3D G3DSA:3.40.50.300 77 346 1.1E-111 T 13-10-2018 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 Gene3D G3DSA:1.10.1140.10 347 460 4.7E-52 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 SUPERFAMILY SSF47917 347 459 2.88E-49 T 13-10-2018 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 SUPERFAMILY SSF50615 3 76 8.37E-25 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 SMART SM00382 143 321 2.5E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1236 4297316e47a4a514af5e04871e21d154 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 335 344 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 7 74 2.0E-22 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 344 5.6E-66 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 Gene3D G3DSA:2.40.10.170 1 76 3.7E-30 T 13-10-2018 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 2 460 55.197 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TREPR_1236 4297316e47a4a514af5e04871e21d154 460 SUPERFAMILY SSF52540 78 350 1.54E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1236 4297316e47a4a514af5e04871e21d154 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 4 460 4.1E-241 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TREPR_2575 b2dedf51994319d9389256e9241aa77b 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 309 34.988 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TREPR_2575 b2dedf51994319d9389256e9241aa77b 316 Gene3D G3DSA:3.40.50.150 5 305 7.7E-94 T 13-10-2018 TREPR_2575 b2dedf51994319d9389256e9241aa77b 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 308 2.9E-99 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TREPR_2575 b2dedf51994319d9389256e9241aa77b 316 Pfam PF01795 MraW methylase family 4 309 4.5E-111 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TREPR_2575 b2dedf51994319d9389256e9241aa77b 316 SUPERFAMILY SSF81799 112 213 2.35E-30 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TREPR_2575 b2dedf51994319d9389256e9241aa77b 316 PIRSF PIRSF004486 1 310 1.7E-103 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TREPR_2575 b2dedf51994319d9389256e9241aa77b 316 Gene3D G3DSA:1.10.150.170 110 215 7.7E-94 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TREPR_2575 b2dedf51994319d9389256e9241aa77b 316 SUPERFAMILY SSF53335 5 309 1.82E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2240 e6ff03c3da751ecd691c344b391c32a3 197 SUPERFAMILY SSF141571 47 191 3.04E-28 T 13-10-2018 TREPR_2240 e6ff03c3da751ecd691c344b391c32a3 197 Pfam PF13599 Pentapeptide repeats (9 copies) 115 184 4.8E-10 T 13-10-2018 IPR001646 Pentapeptide repeat TREPR_2240 e6ff03c3da751ecd691c344b391c32a3 197 Gene3D G3DSA:2.160.20.100 19 194 2.1E-27 T 13-10-2018 TREPR_2240 e6ff03c3da751ecd691c344b391c32a3 197 Pfam PF00805 Pentapeptide repeats (8 copies) 69 106 1.1E-4 T 13-10-2018 IPR001646 Pentapeptide repeat TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 SMART SM00060 131 221 0.004 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 SMART SM00060 31 117 0.0028 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 SMART SM00060 237 319 6.2E-4 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 SUPERFAMILY SSF49265 130 327 6.07E-16 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 SUPERFAMILY SSF55816 371 586 6.02E-23 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 SUPERFAMILY SSF49265 29 122 2.98E-8 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 Gene3D G3DSA:2.60.40.10 133 230 1.0E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 Gene3D G3DSA:2.60.40.10 234 332 1.5E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 Gene3D G3DSA:2.60.40.10 30 132 4.1E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 Pfam PF02872 5'-nucleotidase, C-terminal domain 373 543 1.1E-14 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 Pfam PF00041 Fibronectin type III domain 240 322 1.9E-6 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_1134 8f3a83f782582c9f98a1cf78db1858bd 609 Gene3D G3DSA:3.90.780.10 366 588 3.3E-20 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2727 a1c14857c85e1dc378f9b7de8207f40e 269 Gene3D G3DSA:3.40.190.10 114 219 2.0E-94 T 13-10-2018 TREPR_2727 a1c14857c85e1dc378f9b7de8207f40e 269 Gene3D G3DSA:3.40.190.10 37 263 2.0E-94 T 13-10-2018 TREPR_2727 a1c14857c85e1dc378f9b7de8207f40e 269 PIRSF PIRSF002854 1 269 1.2E-99 T 13-10-2018 IPR004872 Lipoprotein NlpA family TREPR_2727 a1c14857c85e1dc378f9b7de8207f40e 269 SUPERFAMILY SSF53850 34 269 4.14E-80 T 13-10-2018 TREPR_2727 a1c14857c85e1dc378f9b7de8207f40e 269 Pfam PF03180 NLPA lipoprotein 35 267 7.5E-87 T 13-10-2018 IPR004872 Lipoprotein NlpA family TREPR_0672 edd572e5bc9a99e512e767cc721731d2 316 SUPERFAMILY SSF161098 92 296 4.91E-19 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0672 edd572e5bc9a99e512e767cc721731d2 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 313 1.7E-37 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0672 edd572e5bc9a99e512e767cc721731d2 316 Gene3D G3DSA:1.10.3720.10 87 307 2.5E-25 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2471 8c7c03ba6d54ce4cdda99299bd6ab0f8 247 Gene3D G3DSA:2.40.320.10 40 245 5.2E-37 T 13-10-2018 TREPR_2471 8c7c03ba6d54ce4cdda99299bd6ab0f8 247 Pfam PF01928 CYTH domain 42 238 1.9E-6 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 TREPR_2471 8c7c03ba6d54ce4cdda99299bd6ab0f8 247 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 42 174 3.0E-6 T 13-10-2018 TREPR_2471 8c7c03ba6d54ce4cdda99299bd6ab0f8 247 SUPERFAMILY SSF55154 41 242 3.6E-11 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 TREPR_0979 1190748add9fb6e89961fb28577b2efd 377 SUPERFAMILY SSF53659 2 376 2.69E-115 T 13-10-2018 TREPR_0979 1190748add9fb6e89961fb28577b2efd 377 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 374 49.128 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 TREPR_0979 1190748add9fb6e89961fb28577b2efd 377 SMART SM01329 4 370 1.2E-180 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TREPR_0979 1190748add9fb6e89961fb28577b2efd 377 Gene3D G3DSA:3.40.718.10 1 377 4.1E-137 T 13-10-2018 TREPR_0979 1190748add9fb6e89961fb28577b2efd 377 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 TREPR_0979 1190748add9fb6e89961fb28577b2efd 377 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 370 4.2E-122 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TREPR_0979 1190748add9fb6e89961fb28577b2efd 377 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 361 2.2E-142 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 TREPR_2613 debc4fb9c55e19c16e6de3815436b273 142 SMART SM00530 86 142 1.1E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2613 debc4fb9c55e19c16e6de3815436b273 142 Gene3D G3DSA:3.30.160.250 7 77 3.5E-9 T 13-10-2018 TREPR_2613 debc4fb9c55e19c16e6de3815436b273 142 SUPERFAMILY SSF47413 82 136 1.38E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_2613 debc4fb9c55e19c16e6de3815436b273 142 SUPERFAMILY SSF143100 4 62 2.49E-10 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like TREPR_2613 debc4fb9c55e19c16e6de3815436b273 142 Pfam PF01381 Helix-turn-helix 87 136 3.5E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2613 debc4fb9c55e19c16e6de3815436b273 142 Gene3D G3DSA:1.10.260.40 78 141 3.4E-10 T 13-10-2018 TREPR_2238 1fdc2d9c223a173910f5dc3a89390e5e 239 SMART SM00849 12 203 4.6E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2238 1fdc2d9c223a173910f5dc3a89390e5e 239 SUPERFAMILY SSF56281 58 220 7.31E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2238 1fdc2d9c223a173910f5dc3a89390e5e 239 Gene3D G3DSA:3.60.15.10 54 235 5.7E-40 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2238 1fdc2d9c223a173910f5dc3a89390e5e 239 Pfam PF00753 Metallo-beta-lactamase superfamily 58 203 3.5E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_3579 92a1fcd6d9a2c21e5d164427c7a7361c 530 Pfam PF00005 ABC transporter 23 189 6.0E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3579 92a1fcd6d9a2c21e5d164427c7a7361c 530 SUPERFAMILY SSF52540 291 519 1.87E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3579 92a1fcd6d9a2c21e5d164427c7a7361c 530 SMART SM00382 301 503 19.0 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3579 92a1fcd6d9a2c21e5d164427c7a7361c 530 SMART SM00382 32 236 1.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3579 92a1fcd6d9a2c21e5d164427c7a7361c 530 Gene3D G3DSA:3.40.50.300 2 253 1.8E-51 T 13-10-2018 TREPR_3579 92a1fcd6d9a2c21e5d164427c7a7361c 530 Gene3D G3DSA:3.40.50.300 276 518 4.3E-36 T 13-10-2018 TREPR_3579 92a1fcd6d9a2c21e5d164427c7a7361c 530 Pfam PF00005 ABC transporter 293 454 4.7E-12 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3579 92a1fcd6d9a2c21e5d164427c7a7361c 530 SUPERFAMILY SSF52540 6 242 5.78E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3579 92a1fcd6d9a2c21e5d164427c7a7361c 530 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2290 2d4a7b8877b2853ec1639b613131cfdf 102 Gene3D G3DSA:3.30.565.60 1 57 2.5E-5 T 13-10-2018 IPR038475 RecG, C-terminal domain superfamily TREPR_0256 8580d93da6c0c2780187afd456989080 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 74 378 3.5E-62 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TREPR_0256 8580d93da6c0c2780187afd456989080 400 Gene3D G3DSA:3.40.50.1100 59 384 1.7E-109 T 13-10-2018 TREPR_0256 8580d93da6c0c2780187afd456989080 400 Gene3D G3DSA:3.40.50.1100 110 206 1.7E-109 T 13-10-2018 TREPR_0256 8580d93da6c0c2780187afd456989080 400 SUPERFAMILY SSF53686 5 387 6.02E-89 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TREPR_3390 8f69978dc65209a2af3895dbc418218d 514 Pfam PF00639 PPIC-type PPIASE domain 247 329 1.0E-8 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TREPR_3390 8f69978dc65209a2af3895dbc418218d 514 Pfam PF13624 SurA N-terminal domain 20 161 4.8E-9 T 13-10-2018 TREPR_3390 8f69978dc65209a2af3895dbc418218d 514 SUPERFAMILY SSF54534 242 329 1.44E-12 T 13-10-2018 TREPR_3390 8f69978dc65209a2af3895dbc418218d 514 SUPERFAMILY SSF109998 83 177 1.02E-5 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily TREPR_3390 8f69978dc65209a2af3895dbc418218d 514 Gene3D G3DSA:3.10.50.40 236 334 1.0E-12 T 13-10-2018 TREPR_0004 e475bb31e07a36b1dde043b4541181f5 486 Pfam PF10531 SLBB domain 205 259 3.3E-7 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0004 e475bb31e07a36b1dde043b4541181f5 486 Pfam PF10531 SLBB domain 386 422 0.013 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0004 e475bb31e07a36b1dde043b4541181f5 486 Gene3D G3DSA:3.10.560.10 201 285 3.5E-9 T 13-10-2018 TREPR_0004 e475bb31e07a36b1dde043b4541181f5 486 Gene3D G3DSA:3.10.560.10 116 200 3.4E-8 T 13-10-2018 TREPR_1751 48aa38bed7ab9c170eb41c847390b3eb 630 SUPERFAMILY SSF88713 7 257 2.63E-37 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TREPR_1751 48aa38bed7ab9c170eb41c847390b3eb 630 Gene3D G3DSA:2.70.98.10 413 626 1.1E-9 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TREPR_1751 48aa38bed7ab9c170eb41c847390b3eb 630 Gene3D G3DSA:2.70.98.10 357 411 5.2E-11 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TREPR_1751 48aa38bed7ab9c170eb41c847390b3eb 630 SUPERFAMILY SSF74650 356 589 1.26E-19 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TREPR_1751 48aa38bed7ab9c170eb41c847390b3eb 630 Pfam PF03065 Glycosyl hydrolase family 57 23 156 8.9E-25 T 13-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 TREPR_1751 48aa38bed7ab9c170eb41c847390b3eb 630 Pfam PF09094 Domain of unknown function (DUF1925) 270 346 4.9E-6 T 13-10-2018 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain TREPR_1751 48aa38bed7ab9c170eb41c847390b3eb 630 Gene3D G3DSA:3.20.110.20 3 345 2.0E-73 T 13-10-2018 TREPR_1751 48aa38bed7ab9c170eb41c847390b3eb 630 Pfam PF09095 Domain of unknown function (DUF1926) 419 624 1.1E-12 T 13-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 TREPR_1751 48aa38bed7ab9c170eb41c847390b3eb 630 Pfam PF09095 Domain of unknown function (DUF1926) 362 410 6.3E-9 T 13-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 SUPERFAMILY SSF103039 36 153 7.59E-20 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 SUPERFAMILY SSF101801 279 357 5.89E-23 T 13-10-2018 IPR036429 SpoA-like superfamily TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 Gene3D G3DSA:2.30.330.10 269 361 1.6E-34 T 13-10-2018 IPR036429 SpoA-like superfamily TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 PRINTS PR00956 Flagellar motor switch protein FliN signature 281 297 1.0E-27 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 PRINTS PR00956 Flagellar motor switch protein FliN signature 327 342 1.0E-27 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 PRINTS PR00956 Flagellar motor switch protein FliN signature 298 314 1.0E-27 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 PRINTS PR00956 Flagellar motor switch protein FliN signature 314 327 1.0E-27 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 Gene3D G3DSA:3.40.1550.10 33 209 1.6E-20 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 278 352 1.7E-29 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 TREPR_2855 71af4e43c1c14179843d89b17dea40a1 361 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 282 351 1.1E-23 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) TREPR_3640 0c772ad12a6c6ca6e7b0563839afeac7 329 Pfam PF07670 Nucleoside recognition 29 110 1.6E-5 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 TREPR_1652 64d9eb4bd652e13b7a54df867c3379e1 417 Gene3D G3DSA:1.10.3210.10 194 416 1.8E-65 T 13-10-2018 TREPR_1652 64d9eb4bd652e13b7a54df867c3379e1 417 SUPERFAMILY SSF55781 10 205 4.14E-24 T 13-10-2018 TREPR_1652 64d9eb4bd652e13b7a54df867c3379e1 417 Pfam PF01966 HD domain 214 363 2.5E-17 T 13-10-2018 IPR006674 HD domain TREPR_1652 64d9eb4bd652e13b7a54df867c3379e1 417 SMART SM00471 209 373 2.2E-9 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_1652 64d9eb4bd652e13b7a54df867c3379e1 417 SUPERFAMILY SSF109604 210 404 2.71E-31 T 13-10-2018 TREPR_1652 64d9eb4bd652e13b7a54df867c3379e1 417 SMART SM00065 23 198 6.4E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_1652 64d9eb4bd652e13b7a54df867c3379e1 417 Gene3D G3DSA:3.30.450.40 7 193 7.0E-33 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_1652 64d9eb4bd652e13b7a54df867c3379e1 417 Pfam PF01590 GAF domain 23 188 1.6E-12 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_2990 d383896765c87d4fb6db2b2bda4fb3ff 272 SUPERFAMILY SSF46785 7 72 4.93E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2990 d383896765c87d4fb6db2b2bda4fb3ff 272 Pfam PF01614 Bacterial transcriptional regulator 126 251 8.4E-36 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal TREPR_2990 d383896765c87d4fb6db2b2bda4fb3ff 272 SUPERFAMILY SSF55781 77 255 9.81E-46 T 13-10-2018 TREPR_2990 d383896765c87d4fb6db2b2bda4fb3ff 272 SMART SM00346 7 96 5.1E-19 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TREPR_2990 d383896765c87d4fb6db2b2bda4fb3ff 272 Pfam PF09339 IclR helix-turn-helix domain 9 58 2.6E-17 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TREPR_2990 d383896765c87d4fb6db2b2bda4fb3ff 272 Gene3D G3DSA:1.10.10.10 2 73 1.1E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2990 d383896765c87d4fb6db2b2bda4fb3ff 272 Gene3D G3DSA:3.30.450.40 80 259 2.4E-55 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_0748 e65887c65cafe2cb2fadc5a8c0d48aea 288 SMART SM00476 19 284 8.4E-14 T 13-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 TREPR_0748 e65887c65cafe2cb2fadc5a8c0d48aea 288 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 40 240 9.8E-7 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TREPR_0748 e65887c65cafe2cb2fadc5a8c0d48aea 288 Gene3D G3DSA:3.60.10.10 36 281 9.4E-62 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_0748 e65887c65cafe2cb2fadc5a8c0d48aea 288 SUPERFAMILY SSF56219 36 281 1.83E-28 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_0748 e65887c65cafe2cb2fadc5a8c0d48aea 288 PRINTS PR00130 DNase I signature 46 75 1.8E-11 T 13-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 TREPR_0748 e65887c65cafe2cb2fadc5a8c0d48aea 288 PRINTS PR00130 DNase I signature 259 279 1.8E-11 T 13-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 TREPR_0748 e65887c65cafe2cb2fadc5a8c0d48aea 288 PRINTS PR00130 DNase I signature 179 208 1.8E-11 T 13-10-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 TREPR_3097 7b489e06a67ee5542b492cb2ba17372d 245 Gene3D G3DSA:3.40.140.10 101 243 8.3E-36 T 13-10-2018 TREPR_3097 7b489e06a67ee5542b492cb2ba17372d 245 PIRSF PIRSF015626 101 242 1.0E-34 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 TREPR_3097 7b489e06a67ee5542b492cb2ba17372d 245 PIRSF PIRSF015626 6 103 8.7E-14 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 TREPR_3097 7b489e06a67ee5542b492cb2ba17372d 245 Pfam PF02634 FdhD/NarQ family 32 96 2.5E-10 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 TREPR_3097 7b489e06a67ee5542b492cb2ba17372d 245 Pfam PF02634 FdhD/NarQ family 104 239 2.8E-36 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 TREPR_3097 7b489e06a67ee5542b492cb2ba17372d 245 Gene3D G3DSA:3.10.20.10 34 100 3.0E-10 T 13-10-2018 TREPR_3097 7b489e06a67ee5542b492cb2ba17372d 245 SUPERFAMILY SSF53927 13 239 7.82E-51 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TREPR_0580 3d18eff81538dc22c5f04cd498a7fae2 221 Pfam PF04773 FecR protein 58 150 1.9E-10 T 13-10-2018 IPR006860 FecR protein TREPR_3249 41631b9114c17a572ae812278b644b1d 115 Gene3D G3DSA:2.30.30.110 1 112 8.5E-35 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TREPR_3249 41631b9114c17a572ae812278b644b1d 115 PIRSF PIRSF033490 1 112 5.1E-30 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TREPR_3249 41631b9114c17a572ae812278b644b1d 115 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 108 4.3E-25 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TREPR_3249 41631b9114c17a572ae812278b644b1d 115 SUPERFAMILY SSF50118 2 112 4.36E-30 T 13-10-2018 TREPR_0302 7ba2187743b05b0a671a2f72cc2fdf53 401 Pfam PF13534 4Fe-4S dicluster domain 295 364 5.1E-8 T 13-10-2018 TREPR_0302 7ba2187743b05b0a671a2f72cc2fdf53 401 Pfam PF00248 Aldo/keto reductase family 16 265 1.8E-25 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain TREPR_0302 7ba2187743b05b0a671a2f72cc2fdf53 401 SUPERFAMILY SSF51430 1 324 4.71E-49 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_0302 7ba2187743b05b0a671a2f72cc2fdf53 401 SUPERFAMILY SSF46548 286 370 1.28E-8 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_0302 7ba2187743b05b0a671a2f72cc2fdf53 401 Gene3D G3DSA:1.10.1060.10 283 377 2.0E-9 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_0302 7ba2187743b05b0a671a2f72cc2fdf53 401 PRINTS PR00069 Aldo-keto reductase signature 42 66 2.1E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_0302 7ba2187743b05b0a671a2f72cc2fdf53 401 PRINTS PR00069 Aldo-keto reductase signature 99 117 2.1E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_0302 7ba2187743b05b0a671a2f72cc2fdf53 401 PRINTS PR00069 Aldo-keto reductase signature 135 152 2.1E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_0302 7ba2187743b05b0a671a2f72cc2fdf53 401 Gene3D G3DSA:3.20.20.100 1 268 7.8E-40 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_3041 7b533811ed30700382c634c799f9f7a6 251 Pfam PF03099 Biotin/lipoate A/B protein ligase family 34 140 1.7E-7 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TREPR_3041 7b533811ed30700382c634c799f9f7a6 251 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 16 238 7.5E-33 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TREPR_3041 7b533811ed30700382c634c799f9f7a6 251 Gene3D G3DSA:3.30.930.10 5 196 9.2E-40 T 13-10-2018 TREPR_3041 7b533811ed30700382c634c799f9f7a6 251 SUPERFAMILY SSF55681 7 176 8.95E-37 T 13-10-2018 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Gene3D G3DSA:2.60.40.10 643 760 3.0E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 PRINTS PR00344 Bacterial sensor protein C-terminal signature 997 1015 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 PRINTS PR00344 Bacterial sensor protein C-terminal signature 962 976 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1021 1034 1.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Pfam PF07495 Y_Y_Y domain 688 750 1.9E-7 T 13-10-2018 IPR011123 Two component regulator three Y TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 SUPERFAMILY SSF55874 864 1034 3.01E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Gene3D G3DSA:3.30.565.10 874 1040 9.9E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 SUPERFAMILY SSF47226 1163 1310 1.96E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Gene3D G3DSA:1.20.120.160 1207 1315 1.6E-9 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 SUPERFAMILY SSF63829 58 213 2.35E-12 T 13-10-2018 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 SMART SM00388 810 875 2.5E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Gene3D G3DSA:3.40.50.2300 1057 1185 3.8E-35 T 13-10-2018 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 SUPERFAMILY SSF52172 1060 1186 9.39E-32 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 SUPERFAMILY SSF63829 307 583 1.83E-8 T 13-10-2018 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Gene3D G3DSA:1.10.287.130 783 873 1.4E-28 T 13-10-2018 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 922 1034 2.0E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 SUPERFAMILY SSF47384 793 876 6.47E-22 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 SMART SM00387 922 1037 2.3E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Pfam PF07494 Two component regulator propeller 102 123 5.4E-4 T 13-10-2018 IPR011110 Two component regulator propeller TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 SMART SM00448 1061 1180 5.6E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Gene3D G3DSA:2.130.10.10 358 639 5.7E-25 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Pfam PF00512 His Kinase A (phospho-acceptor) domain 811 875 5.6E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Pfam PF01627 Hpt domain 1233 1312 2.8E-5 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Gene3D G3DSA:2.130.10.10 50 329 1.4E-39 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_1256 e1a815ca824c39ef39b7c9363d9e68c4 1411 Pfam PF00072 Response regulator receiver domain 1064 1178 3.7E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 TIGRFAM TIGR03356 BGL: beta-galactosidase 6 453 3.0E-177 T 13-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 Pfam PF00232 Glycosyl hydrolase family 1 5 459 2.4E-167 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 SUPERFAMILY SSF51445 5 459 6.13E-164 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 9.2E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 9.2E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 397 9.2E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 407 424 9.2E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 362 370 9.2E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 362 370 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site TREPR_1611 cc10598f167d80c00af9e12238aa56a0 460 Gene3D G3DSA:3.20.20.80 1 460 3.8E-175 T 13-10-2018 TREPR_2343 f9d5b1b922ab7f3a5416fa792cf6e9e5 407 Pfam PF01546 Peptidase family M20/M25/M40 101 354 2.6E-9 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 TREPR_2343 f9d5b1b922ab7f3a5416fa792cf6e9e5 407 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 34 357 1.0E-54 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 TREPR_2343 f9d5b1b922ab7f3a5416fa792cf6e9e5 407 SUPERFAMILY SSF53187 18 387 5.39E-59 T 13-10-2018 TREPR_2343 f9d5b1b922ab7f3a5416fa792cf6e9e5 407 Gene3D G3DSA:3.30.70.360 179 296 2.7E-109 T 13-10-2018 TREPR_2343 f9d5b1b922ab7f3a5416fa792cf6e9e5 407 Pfam PF07687 Peptidase dimerisation domain 184 274 2.2E-8 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain TREPR_2343 f9d5b1b922ab7f3a5416fa792cf6e9e5 407 Gene3D G3DSA:3.40.630.10 33 372 2.7E-109 T 13-10-2018 TREPR_2343 f9d5b1b922ab7f3a5416fa792cf6e9e5 407 PIRSF PIRSF037226 10 405 8.3E-107 T 13-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted TREPR_2343 f9d5b1b922ab7f3a5416fa792cf6e9e5 407 SUPERFAMILY SSF55031 182 282 4.01E-17 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TREPR_0941 4d420e9bd570054a6054418ac0edc0fc 355 SUPERFAMILY SSF52540 17 182 3.1E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0941 4d420e9bd570054a6054418ac0edc0fc 355 Pfam PF07728 AAA domain (dynein-related subfamily) 22 151 2.7E-9 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TREPR_0941 4d420e9bd570054a6054418ac0edc0fc 355 Gene3D G3DSA:3.40.50.300 7 164 5.3E-19 T 13-10-2018 TREPR_2152 3313a63d22692f10765ccfeb05e8567d 449 SMART SM01091 361 442 1.8E-30 T 13-10-2018 IPR005170 Transporter-associated domain TREPR_2152 3313a63d22692f10765ccfeb05e8567d 449 Gene3D G3DSA:3.30.465.10 362 442 1.1E-29 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TREPR_2152 3313a63d22692f10765ccfeb05e8567d 449 Pfam PF01595 Domain of unknown function DUF21 10 212 5.0E-29 T 13-10-2018 IPR002550 CNNM, transmembrane domain TREPR_2152 3313a63d22692f10765ccfeb05e8567d 449 Gene3D G3DSA:3.10.580.10 208 361 6.7E-38 T 13-10-2018 TREPR_2152 3313a63d22692f10765ccfeb05e8567d 449 SUPERFAMILY SSF56176 359 446 3.82E-24 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TREPR_2152 3313a63d22692f10765ccfeb05e8567d 449 SUPERFAMILY SSF54631 215 349 1.94E-23 T 13-10-2018 TREPR_2152 3313a63d22692f10765ccfeb05e8567d 449 Pfam PF03471 Transporter associated domain 363 441 2.8E-24 T 13-10-2018 IPR005170 Transporter-associated domain TREPR_2152 3313a63d22692f10765ccfeb05e8567d 449 Pfam PF00571 CBS domain 299 347 9.9E-6 T 13-10-2018 IPR000644 CBS domain TREPR_1942 a71b678c582ee2c18c170a6c27a57bda 126 SMART SM00529 22 121 6.4E-31 T 13-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 TREPR_1942 a71b678c582ee2c18c170a6c27a57bda 126 SUPERFAMILY SSF46785 12 112 1.96E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1942 a71b678c582ee2c18c170a6c27a57bda 126 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 61 113 9.8E-15 T 13-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 TREPR_1942 a71b678c582ee2c18c170a6c27a57bda 126 Gene3D G3DSA:1.10.60.10 66 121 1.2E-18 T 13-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 TREPR_1942 a71b678c582ee2c18c170a6c27a57bda 126 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 2 57 3.0E-12 T 13-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 TREPR_1942 a71b678c582ee2c18c170a6c27a57bda 126 Gene3D G3DSA:1.10.10.10 1 65 3.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0170 e979ac0635cb81314649fa3f75b48e05 278 SUPERFAMILY SSF161098 76 260 1.44E-29 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0170 e979ac0635cb81314649fa3f75b48e05 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 261 7.3E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0170 e979ac0635cb81314649fa3f75b48e05 278 Gene3D G3DSA:1.10.3720.10 72 269 3.2E-22 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2518 efe1f2bd5ace10d06fb8a9a678eb048e 299 Gene3D G3DSA:3.90.79.20 78 170 2.0E-7 T 13-10-2018 TREPR_2518 efe1f2bd5ace10d06fb8a9a678eb048e 299 Pfam PF00293 NUDIX domain 174 281 1.4E-17 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TREPR_2518 efe1f2bd5ace10d06fb8a9a678eb048e 299 Gene3D G3DSA:3.90.79.10 171 298 2.6E-38 T 13-10-2018 TREPR_2518 efe1f2bd5ace10d06fb8a9a678eb048e 299 ProSitePatterns PS00893 Nudix box signature. 205 226 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TREPR_2518 efe1f2bd5ace10d06fb8a9a678eb048e 299 SUPERFAMILY SSF55811 126 287 3.52E-39 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TREPR_1153 554543ff09265f84a5c0448f02a6db4c 485 Gene3D G3DSA:3.40.50.12240 2 462 9.6E-167 T 13-10-2018 TREPR_1153 554543ff09265f84a5c0448f02a6db4c 485 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 75 1.3E-6 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1153 554543ff09265f84a5c0448f02a6db4c 485 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 354 2.4E-62 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TREPR_1153 554543ff09265f84a5c0448f02a6db4c 485 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 3 463 56.103 T 13-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1153 554543ff09265f84a5c0448f02a6db4c 485 SUPERFAMILY SSF52540 79 359 2.07E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1153 554543ff09265f84a5c0448f02a6db4c 485 SUPERFAMILY SSF47917 366 427 6.54E-6 T 13-10-2018 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Pfam PF02743 Cache domain 57 261 8.4E-12 T 13-10-2018 IPR033479 Double Cache domain 1 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 SUPERFAMILY SSF55781 318 478 2.12E-8 T 13-10-2018 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 SUPERFAMILY SSF47384 488 570 1.1E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Pfam PF00512 His Kinase A (phospho-acceptor) domain 503 569 5.9E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Pfam PF01590 GAF domain 342 478 1.3E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 SMART SM00448 777 895 3.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Gene3D G3DSA:3.30.450.20 156 278 3.5E-15 T 13-10-2018 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 SUPERFAMILY SSF52172 777 900 2.28E-30 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 SUPERFAMILY SSF55874 558 735 1.96E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Pfam PF00072 Response regulator receiver domain 779 895 1.8E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Gene3D G3DSA:3.40.50.12740 776 944 9.2E-34 T 13-10-2018 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 616 737 1.4E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Gene3D G3DSA:1.10.287.130 480 567 1.2E-23 T 13-10-2018 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Gene3D G3DSA:3.30.450.40 337 479 6.4E-10 T 13-10-2018 IPR029016 GAF-like domain superfamily TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 SMART SM00387 616 739 1.1E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Gene3D G3DSA:3.30.565.10 568 739 4.2E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 Gene3D G3DSA:1.20.120.160 945 1057 1.0E-9 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 736 3.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 PRINTS PR00344 Bacterial sensor protein C-terminal signature 699 717 3.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 678 3.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 SMART SM00388 503 569 8.1E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0078 1fbde87c6ee630ad5813586098f95430 1126 SUPERFAMILY SSF47226 941 1052 1.06E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2933 7193bab56433b8c340a6af8590595e7e 606 SUPERFAMILY SSF52540 442 551 1.39E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2933 7193bab56433b8c340a6af8590595e7e 606 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 602 1.4E-158 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TREPR_2933 7193bab56433b8c340a6af8590595e7e 606 SUPERFAMILY SSF52540 1 219 9.31E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2933 7193bab56433b8c340a6af8590595e7e 606 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 560 7.9E-17 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TREPR_2933 7193bab56433b8c340a6af8590595e7e 606 PIRSF PIRSF003128 1 606 3.0E-151 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TREPR_2933 7193bab56433b8c340a6af8590595e7e 606 Gene3D G3DSA:3.40.50.300 239 603 3.2E-46 T 13-10-2018 TREPR_2933 7193bab56433b8c340a6af8590595e7e 606 Gene3D G3DSA:3.40.50.300 1 210 1.8E-41 T 13-10-2018 TREPR_2226 471640fbea5db88c43170f0f04fecc57 150 Gene3D G3DSA:3.30.565.10 5 144 4.4E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2226 471640fbea5db88c43170f0f04fecc57 150 Pfam PF13581 Histidine kinase-like ATPase domain 11 136 1.3E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2226 471640fbea5db88c43170f0f04fecc57 150 SUPERFAMILY SSF55874 38 128 5.52E-7 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2984 19f96a998fda66532f03c598855cbacf 622 Pfam PF03880 DbpA RNA binding domain 535 589 4.3E-7 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain TREPR_2984 19f96a998fda66532f03c598855cbacf 622 Gene3D G3DSA:3.40.50.300 3 211 3.2E-67 T 13-10-2018 TREPR_2984 19f96a998fda66532f03c598855cbacf 622 Pfam PF00270 DEAD/DEAH box helicase 32 195 9.1E-44 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TREPR_2984 19f96a998fda66532f03c598855cbacf 622 Gene3D G3DSA:3.40.50.300 218 429 1.5E-46 T 13-10-2018 TREPR_2984 19f96a998fda66532f03c598855cbacf 622 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TREPR_2984 19f96a998fda66532f03c598855cbacf 622 Pfam PF00271 Helicase conserved C-terminal domain 234 347 1.2E-24 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2984 19f96a998fda66532f03c598855cbacf 622 SMART SM00487 26 224 1.6E-52 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2984 19f96a998fda66532f03c598855cbacf 622 SUPERFAMILY SSF52540 77 364 6.0E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2984 19f96a998fda66532f03c598855cbacf 622 SMART SM00490 260 347 2.2E-29 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2045 602b28ec8b4d12f289422842b0fe10eb 173 Pfam PF00877 NlpC/P60 family 35 125 4.3E-5 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain TREPR_2045 602b28ec8b4d12f289422842b0fe10eb 173 SUPERFAMILY SSF54001 22 132 3.14E-10 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_2045 602b28ec8b4d12f289422842b0fe10eb 173 Gene3D G3DSA:3.90.1720.10 20 144 4.8E-11 T 13-10-2018 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 248 4.7E-80 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 SUPERFAMILY SSF53067 3 251 2.85E-91 T 13-10-2018 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 446 3.8E-56 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 Hamap MF_00186 Glycerol kinase [glpK]. 2 493 56.461 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 Gene3D G3DSA:3.30.420.40 2 249 1.2E-102 T 13-10-2018 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 492 2.4E-214 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 PIRSF PIRSF000538 2 494 1.4E-168 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 Gene3D G3DSA:3.30.420.40 250 494 3.1E-83 T 13-10-2018 TREPR_3330 f2367a3efbcdc04fa793cbc61e7f4428 494 SUPERFAMILY SSF53067 250 492 1.34E-79 T 13-10-2018 TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 Pfam PF01301 Glycosyl hydrolases family 35 273 391 5.8E-9 T 13-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 Pfam PF01301 Glycosyl hydrolases family 35 40 187 5.0E-46 T 13-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 PRINTS PR00742 Glycosyl hydrolase family 35 signature 117 136 1.9E-19 T 13-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 PRINTS PR00742 Glycosyl hydrolase family 35 signature 62 80 1.9E-19 T 13-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 PRINTS PR00742 Glycosyl hydrolase family 35 signature 41 58 1.9E-19 T 13-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 PRINTS PR00742 Glycosyl hydrolase family 35 signature 337 352 1.9E-19 T 13-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 PRINTS PR00742 Glycosyl hydrolase family 35 signature 362 378 1.9E-19 T 13-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 SUPERFAMILY SSF51445 28 386 8.99E-58 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 173 185 - T 13-10-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 TREPR_2986 da191a6637cdcf777c229184e7576c8e 785 Gene3D G3DSA:3.20.20.80 28 397 3.9E-93 T 13-10-2018 TREPR_0706 7935c1004a82460596c6f1745619f232 318 Gene3D G3DSA:3.40.50.300 3 318 1.0E-97 T 13-10-2018 TREPR_0706 7935c1004a82460596c6f1745619f232 318 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 315 1.7E-22 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0706 7935c1004a82460596c6f1745619f232 318 Pfam PF00005 ABC transporter 26 179 1.2E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0706 7935c1004a82460596c6f1745619f232 318 SUPERFAMILY SSF52540 5 251 2.24E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0706 7935c1004a82460596c6f1745619f232 318 SMART SM00382 34 229 1.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0706 7935c1004a82460596c6f1745619f232 318 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 296 1.5E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0756 e8ae1ec16ec29214ea89bd7ba7c8ff9a 345 SUPERFAMILY SSF51726 1 336 5.23E-47 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_0756 e8ae1ec16ec29214ea89bd7ba7c8ff9a 345 Gene3D G3DSA:3.20.20.210 1 338 2.1E-69 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_0756 e8ae1ec16ec29214ea89bd7ba7c8ff9a 345 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 336 2.6E-48 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_2681 9733489ef396820ee0e42c471fefcdd5 197 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2681 9733489ef396820ee0e42c471fefcdd5 197 SUPERFAMILY SSF55658 1 57 8.37E-17 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal TREPR_2681 9733489ef396820ee0e42c471fefcdd5 197 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 2.8E-19 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2681 9733489ef396820ee0e42c471fefcdd5 197 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 7.1E-22 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal TREPR_2681 9733489ef396820ee0e42c471fefcdd5 197 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 1.4E-42 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2681 9733489ef396820ee0e42c471fefcdd5 197 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.968 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_2681 9733489ef396820ee0e42c471fefcdd5 197 SUPERFAMILY SSF55653 60 147 5.62E-22 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TREPR_2681 9733489ef396820ee0e42c471fefcdd5 197 Gene3D G3DSA:3.10.430.100 62 148 2.7E-21 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TREPR_2681 9733489ef396820ee0e42c471fefcdd5 197 Gene3D G3DSA:3.40.5.10 1 61 1.5E-21 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0369 cd8b89a00221f6235eb43c4ace9c0559 257 Gene3D G3DSA:3.40.50.1820 1 256 9.2E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_0369 cd8b89a00221f6235eb43c4ace9c0559 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 197 211 1.4E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_0369 cd8b89a00221f6235eb43c4ace9c0559 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 1.4E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_0369 cd8b89a00221f6235eb43c4ace9c0559 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 1.4E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_0369 cd8b89a00221f6235eb43c4ace9c0559 257 Pfam PF12697 Alpha/beta hydrolase family 19 238 3.6E-21 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TREPR_0369 cd8b89a00221f6235eb43c4ace9c0559 257 SUPERFAMILY SSF53474 2 252 1.31E-55 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_3797 ff2534ffb1866f0724bd53df7df0c2dc 1000 SUPERFAMILY SSF52540 242 541 5.18E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3797 ff2534ffb1866f0724bd53df7df0c2dc 1000 Pfam PF12705 PD-(D/E)XK nuclease superfamily 679 981 6.5E-22 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 SUPERFAMILY SSF52540 376 673 4.3E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 SUPERFAMILY SSF46785 702 763 7.45E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 SMART SM00382 443 622 4.3E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 Pfam PF01580 FtsK/SpoIIIE family 549 599 1.3E-10 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 Pfam PF01580 FtsK/SpoIIIE family 412 547 4.9E-43 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 Pfam PF09397 Ftsk gamma domain 703 762 3.4E-28 T 13-10-2018 IPR018541 FtsK gamma domain TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 Gene3D G3DSA:1.10.10.10 700 762 3.1E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 Gene3D G3DSA:3.40.50.300 401 686 3.6E-100 T 13-10-2018 TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 Gene3D G3DSA:3.30.980.40 295 399 1.3E-30 T 13-10-2018 TREPR_2919 23b93f4bac2ac978a268cbb14c8b7333 765 SMART SM00843 701 765 3.3E-32 T 13-10-2018 IPR018541 FtsK gamma domain TREPR_1279 bff522049f25b4ce2b8b353d4138e22a 324 Gene3D G3DSA:3.40.366.10 11 301 1.1E-81 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 TREPR_1279 bff522049f25b4ce2b8b353d4138e22a 324 PIRSF PIRSF000446 5 324 1.8E-72 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 TREPR_1279 bff522049f25b4ce2b8b353d4138e22a 324 SUPERFAMILY SSF55048 144 208 3.4E-14 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding TREPR_1279 bff522049f25b4ce2b8b353d4138e22a 324 SUPERFAMILY SSF52151 8 321 1.39E-63 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TREPR_1279 bff522049f25b4ce2b8b353d4138e22a 324 Gene3D G3DSA:3.30.70.250 128 212 1.1E-81 T 13-10-2018 TREPR_1279 bff522049f25b4ce2b8b353d4138e22a 324 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 11 314 3.3E-25 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain TREPR_1279 bff522049f25b4ce2b8b353d4138e22a 324 Pfam PF00698 Acyl transferase domain 10 272 6.3E-30 T 13-10-2018 IPR014043 Acyl transferase TREPR_1514 2f8f4184a16d602fea93db6a2478066b 304 SUPERFAMILY SSF53613 15 296 3.74E-49 T 13-10-2018 IPR029056 Ribokinase-like TREPR_1514 2f8f4184a16d602fea93db6a2478066b 304 Gene3D G3DSA:3.40.1190.20 9 301 4.6E-51 T 13-10-2018 IPR029056 Ribokinase-like TREPR_1514 2f8f4184a16d602fea93db6a2478066b 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TREPR_1514 2f8f4184a16d602fea93db6a2478066b 304 Pfam PF00294 pfkB family carbohydrate kinase 32 289 4.0E-35 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB TREPR_3479 877ea72e2374af0fbe413a53c91af8ea 283 Pfam PF00460 Flagella basal body rod protein 6 35 3.2E-9 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TREPR_3479 877ea72e2374af0fbe413a53c91af8ea 283 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 204 277 3.7E-22 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TREPR_3479 877ea72e2374af0fbe413a53c91af8ea 283 SUPERFAMILY SSF117143 98 240 1.28E-23 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TREPR_3479 877ea72e2374af0fbe413a53c91af8ea 283 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 259 1.3E-55 T 13-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 TREPR_3479 877ea72e2374af0fbe413a53c91af8ea 283 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 153 1.9E-38 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TREPR_1052 700882dd9aa14e40e81545434229acb2 359 SUPERFAMILY SSF53822 36 359 1.46E-52 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1052 700882dd9aa14e40e81545434229acb2 359 Pfam PF13407 Periplasmic binding protein domain 38 304 1.1E-46 T 13-10-2018 IPR025997 Periplasmic binding protein TREPR_1052 700882dd9aa14e40e81545434229acb2 359 Gene3D G3DSA:3.40.50.2300 37 343 3.4E-86 T 13-10-2018 TREPR_1052 700882dd9aa14e40e81545434229acb2 359 Gene3D G3DSA:3.40.50.2300 138 359 3.4E-86 T 13-10-2018 TREPR_2479 dd2f675fc5f1381a0647ed6cf3746ba1 334 TIGRFAM TIGR02306 RNA_lig_DRB0094: RNA ligase 4 327 2.6E-45 T 13-10-2018 IPR012646 RNA ligase, DRB0094 TREPR_2479 dd2f675fc5f1381a0647ed6cf3746ba1 334 SUPERFAMILY SSF56091 158 309 3.53E-19 T 13-10-2018 TREPR_2479 dd2f675fc5f1381a0647ed6cf3746ba1 334 Gene3D G3DSA:3.30.470.30 145 321 4.3E-18 T 13-10-2018 TREPR_2479 dd2f675fc5f1381a0647ed6cf3746ba1 334 Pfam PF09414 RNA ligase 163 323 3.9E-27 T 13-10-2018 IPR021122 RNA ligase domain, REL/Rln2 TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 Gene3D G3DSA:3.80.10.10 621 708 1.2E-22 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 Pfam PF13306 Leucine rich repeats (6 copies) 436 519 3.7E-19 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 Pfam PF13306 Leucine rich repeats (6 copies) 327 408 1.2E-20 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 Pfam PF13306 Leucine rich repeats (6 copies) 830 883 1.2E-10 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 Pfam PF13306 Leucine rich repeats (6 copies) 741 822 2.7E-24 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 Pfam PF13306 Leucine rich repeats (6 copies) 520 627 2.0E-28 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 Gene3D G3DSA:3.80.10.10 710 940 7.7E-56 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 SUPERFAMILY SSF52058 335 694 2.04E-38 T 13-10-2018 TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 SUPERFAMILY SSF52058 736 871 3.74E-21 T 13-10-2018 TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 Gene3D G3DSA:3.80.10.10 315 520 1.2E-56 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1071 5d9478e268fd1b8ce709798a09f81787 944 Gene3D G3DSA:3.80.10.10 521 608 1.5E-28 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0709 0cd77da717c58978ebb9bb113f82a1fe 358 Gene3D G3DSA:3.40.630.10 10 342 7.6E-101 T 13-10-2018 TREPR_0709 0cd77da717c58978ebb9bb113f82a1fe 358 Gene3D G3DSA:2.40.30.40 71 165 7.6E-101 T 13-10-2018 IPR023367 Peptidase M42, domain 2 TREPR_0709 0cd77da717c58978ebb9bb113f82a1fe 358 SUPERFAMILY SSF53187 7 350 3.41E-52 T 13-10-2018 TREPR_0709 0cd77da717c58978ebb9bb113f82a1fe 358 SUPERFAMILY SSF101821 72 183 6.41E-24 T 13-10-2018 TREPR_0709 0cd77da717c58978ebb9bb113f82a1fe 358 PIRSF PIRSF001123 3 358 1.4E-94 T 13-10-2018 IPR008007 Peptidase M42 TREPR_0709 0cd77da717c58978ebb9bb113f82a1fe 358 Pfam PF05343 M42 glutamyl aminopeptidase 47 342 3.9E-76 T 13-10-2018 IPR008007 Peptidase M42 TREPR_3444 852af691b44ac871fdc138658fb56b14 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 421 1.4E-67 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3444 852af691b44ac871fdc138658fb56b14 452 PIRSF PIRSF006603 2 452 6.1E-96 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3444 852af691b44ac871fdc138658fb56b14 452 Pfam PF01554 MatE 249 407 2.9E-29 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3444 852af691b44ac871fdc138658fb56b14 452 Pfam PF01554 MatE 26 187 6.5E-27 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2133 4593a5b6ecec69824c0f657c72443c4c 465 SUPERFAMILY SSF50998 228 387 4.97E-5 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TREPR_2133 4593a5b6ecec69824c0f657c72443c4c 465 Pfam PF05935 Arylsulfotransferase (ASST) 134 380 7.1E-22 T 13-10-2018 IPR010262 Arylsulfotransferase, bacteria GO:0004062 TREPR_0611 3c0ad7146887d8c0117ca220d60fa7a0 613 Pfam PF11842 Domain of unknown function (DUF3362) 534 612 3.6E-29 T 13-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal TREPR_0611 3c0ad7146887d8c0117ca220d60fa7a0 613 SUPERFAMILY SSF102114 317 561 2.75E-13 T 13-10-2018 TREPR_0611 3c0ad7146887d8c0117ca220d60fa7a0 613 Pfam PF08497 Radical SAM N-terminal 14 316 7.7E-126 T 13-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal TREPR_0611 3c0ad7146887d8c0117ca220d60fa7a0 613 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 14 581 52.978 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 TREPR_0611 3c0ad7146887d8c0117ca220d60fa7a0 613 Pfam PF04055 Radical SAM superfamily 318 523 1.6E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_0611 3c0ad7146887d8c0117ca220d60fa7a0 613 Gene3D G3DSA:3.80.30.20 314 580 3.3E-13 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TREPR_0611 3c0ad7146887d8c0117ca220d60fa7a0 613 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 14 580 7.4E-246 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 TREPR_0611 3c0ad7146887d8c0117ca220d60fa7a0 613 SMART SM00729 313 569 7.4E-8 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_3280 fc5e08c8bfe1b423a3e04c1f924650f7 289 Gene3D G3DSA:3.40.50.150 43 180 2.1E-15 T 13-10-2018 TREPR_3280 fc5e08c8bfe1b423a3e04c1f924650f7 289 Pfam PF13649 Methyltransferase domain 71 159 4.9E-8 T 13-10-2018 TREPR_3280 fc5e08c8bfe1b423a3e04c1f924650f7 289 SUPERFAMILY SSF53335 46 229 4.6E-22 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_2800 496375268ea2ec1337d2775b1cdb3e31 260 SUPERFAMILY SSF64167 1 232 1.7E-63 T 13-10-2018 TREPR_2800 496375268ea2ec1337d2775b1cdb3e31 260 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 257 29.223 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TREPR_2800 496375268ea2ec1337d2775b1cdb3e31 260 Pfam PF01975 Survival protein SurE 3 168 1.8E-49 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TREPR_2800 496375268ea2ec1337d2775b1cdb3e31 260 Gene3D G3DSA:3.40.1210.10 1 249 9.1E-68 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TREPR_2800 496375268ea2ec1337d2775b1cdb3e31 260 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 230 1.8E-51 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TREPR_0773 541642270816b85ac01cc960a4f1fd39 95 SUPERFAMILY SSF47413 27 87 8.72E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0773 541642270816b85ac01cc960a4f1fd39 95 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 3 89 5.3E-33 T 13-10-2018 IPR014057 Uncharacterized protein HI1420 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 SUPERFAMILY SSF46934 1 55 7.45E-16 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 Gene3D G3DSA:3.30.479.20 142 281 1.0E-39 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 Gene3D G3DSA:1.10.8.10 1 55 1.9E-21 T 13-10-2018 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 281 3.7E-73 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 51.368 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 SUPERFAMILY SSF54713 141 281 7.33E-31 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 Pfam PF00889 Elongation factor TS 70 282 2.7E-54 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 Gene3D G3DSA:3.30.479.20 56 137 1.5E-14 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 SUPERFAMILY SSF54713 56 134 2.29E-13 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TREPR_2671 4cfb99a66d3178a4b73c04b635202cdb 282 Gene3D G3DSA:1.10.286.20 192 240 1.0E-39 T 13-10-2018 TREPR_0520 4f8c46c3b0491805c931470017b005e3 401 Pfam PF01888 CbiD 24 282 4.5E-92 T 13-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TREPR_0520 4f8c46c3b0491805c931470017b005e3 401 PIRSF PIRSF026782 20 369 3.4E-108 T 13-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TREPR_0520 4f8c46c3b0491805c931470017b005e3 401 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 24 389 27.397 T 13-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TREPR_0520 4f8c46c3b0491805c931470017b005e3 401 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 31 349 4.9E-70 T 13-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TREPR_0520 4f8c46c3b0491805c931470017b005e3 401 SUPERFAMILY SSF111342 18 300 5.36E-79 T 13-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TREPR_0520 4f8c46c3b0491805c931470017b005e3 401 Gene3D G3DSA:3.30.2110.10 26 197 3.0E-50 T 13-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TREPR_3427 5de976a911df47c72bfa982038a869b0 144 Pfam PF13470 PIN domain 3 115 3.8E-10 T 13-10-2018 IPR002716 PIN domain TREPR_3427 5de976a911df47c72bfa982038a869b0 144 SUPERFAMILY SSF88723 1 131 5.61E-18 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_3427 5de976a911df47c72bfa982038a869b0 144 Gene3D G3DSA:3.40.50.1010 1 127 9.2E-7 T 13-10-2018 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 254 8.8E-8 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 146 160 8.8E-8 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 301 316 8.8E-8 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 215 320 8.6E-25 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 511 561 1.1E-7 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 SUPERFAMILY SSF53738 32 242 7.46E-46 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 Gene3D G3DSA:3.30.310.50 484 589 2.8E-6 T 13-10-2018 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 334 458 1.3E-21 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 147 156 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 47 188 2.9E-41 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 Gene3D G3DSA:3.40.120.10 332 461 2.6E-35 T 13-10-2018 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 Gene3D G3DSA:3.40.120.10 38 194 2.2E-47 T 13-10-2018 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 Gene3D G3DSA:3.40.120.10 213 331 2.5E-23 T 13-10-2018 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 SUPERFAMILY SSF53738 213 321 7.46E-21 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 SUPERFAMILY SSF53738 309 463 3.22E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_1681 46b19e08845c977c7f3cf15dbee360df 592 SUPERFAMILY SSF55957 453 562 1.7E-10 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_0657 af15c53301cf50e8d8e0d81e1a20beb1 351 Pfam PF13343 Bacterial extracellular solute-binding protein 90 308 3.2E-25 T 13-10-2018 TREPR_0657 af15c53301cf50e8d8e0d81e1a20beb1 351 Gene3D G3DSA:3.40.190.10 48 317 9.0E-71 T 13-10-2018 TREPR_0657 af15c53301cf50e8d8e0d81e1a20beb1 351 PIRSF PIRSF002825 1 328 1.9E-50 T 13-10-2018 IPR026045 Ferric binding protein TREPR_0657 af15c53301cf50e8d8e0d81e1a20beb1 351 Gene3D G3DSA:3.40.190.10 143 323 9.0E-71 T 13-10-2018 TREPR_0657 af15c53301cf50e8d8e0d81e1a20beb1 351 SUPERFAMILY SSF53850 40 323 2.13E-49 T 13-10-2018 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 SMART SM00028 44 77 0.091 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 SMART SM00028 184 217 0.024 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 SMART SM00028 115 148 2.0E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 SMART SM00028 149 183 330.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 Gene3D G3DSA:1.25.40.10 114 228 1.6E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 Pfam PF07719 Tetratricopeptide repeat 188 217 1.9E-6 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 Pfam PF13432 Tetratricopeptide repeat 120 184 9.6E-7 T 13-10-2018 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 Pfam PF13174 Tetratricopeptide repeat 48 73 0.0095 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 Gene3D G3DSA:1.25.40.10 9 113 4.7E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2799 5408ecc4e0974b88e5fc3e10c00af421 232 SUPERFAMILY SSF48452 11 220 4.17E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 14 684 1.8E-186 T 13-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 1.3E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 31 49 1.3E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 58 73 1.3E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 Pfam PF07664 Ferrous iron transport protein B C terminus 488 540 6.0E-19 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 Gene3D G3DSA:3.40.50.300 7 190 3.7E-41 T 13-10-2018 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 Pfam PF07670 Nucleoside recognition 384 474 1.2E-11 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 Pfam PF07670 Nucleoside recognition 545 687 4.8E-29 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 Pfam PF02421 Ferrous iron transport protein B 9 161 3.5E-61 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 TREPR_0627 d4a8c7f0af45084f1b7944fd55b16182 721 SUPERFAMILY SSF52540 8 167 1.35E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3542 30fe8536cd08dc26f0e569910f65ce15 326 Gene3D G3DSA:1.10.3720.10 89 311 1.4E-19 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3542 30fe8536cd08dc26f0e569910f65ce15 326 SUPERFAMILY SSF161098 90 321 1.44E-14 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3542 30fe8536cd08dc26f0e569910f65ce15 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 321 4.1E-39 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3883 cc5c732fc1bdd7cf719f1fa499b72a3d 127 Gene3D G3DSA:3.40.50.150 2 122 3.1E-23 T 13-10-2018 TREPR_3883 cc5c732fc1bdd7cf719f1fa499b72a3d 127 SUPERFAMILY SSF53335 31 100 3.24E-5 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3883 cc5c732fc1bdd7cf719f1fa499b72a3d 127 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 18 109 1.2E-10 T 13-10-2018 IPR008884 Macrocin-O-methyltransferase TREPR_0456 94d94add6581cc35267b60a683e3b703 459 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 79 418 1.9E-44 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TREPR_0456 94d94add6581cc35267b60a683e3b703 459 Gene3D G3DSA:3.40.50.1100 16 424 1.6E-154 T 13-10-2018 TREPR_0456 94d94add6581cc35267b60a683e3b703 459 PIRSF PIRSF500824 4 439 1.4E-181 T 13-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_0456 94d94add6581cc35267b60a683e3b703 459 Gene3D G3DSA:3.40.50.1100 17 242 1.6E-154 T 13-10-2018 TREPR_0456 94d94add6581cc35267b60a683e3b703 459 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 16 430 5.7E-171 T 13-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_0456 94d94add6581cc35267b60a683e3b703 459 SUPERFAMILY SSF53686 54 429 1.44E-95 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TREPR_0456 94d94add6581cc35267b60a683e3b703 459 PIRSF PIRSF001413 12 437 1.5E-110 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_2358 1227e523204de0062afcb520edc31a5c 696 SUPERFAMILY SSF56003 115 686 5.36E-99 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 TREPR_2358 1227e523204de0062afcb520edc31a5c 696 Gene3D G3DSA:3.30.365.10 4 694 1.5E-119 T 13-10-2018 TREPR_2358 1227e523204de0062afcb520edc31a5c 696 SUPERFAMILY SSF54665 7 102 7.59E-15 T 13-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily TREPR_2358 1227e523204de0062afcb520edc31a5c 696 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 8 100 6.4E-6 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TREPR_2358 1227e523204de0062afcb520edc31a5c 696 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 117 633 2.5E-80 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TREPR_2358 1227e523204de0062afcb520edc31a5c 696 SMART SM01008 5 104 4.3E-5 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TREPR_2148 37b50a37e29fb7b2acd1b068f1841911 487 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 416 436 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site TREPR_2148 37b50a37e29fb7b2acd1b068f1841911 487 Gene3D G3DSA:1.20.1730.10 20 484 5.3E-74 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily TREPR_2148 37b50a37e29fb7b2acd1b068f1841911 487 Pfam PF00474 Sodium:solute symporter family 31 434 2.6E-57 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TREPR_3064 ce1903ff6b585ac395433965d14e1350 261 Gene3D G3DSA:3.20.20.20 1 261 3.7E-64 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3064 ce1903ff6b585ac395433965d14e1350 261 SUPERFAMILY SSF51717 4 260 1.44E-55 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3064 ce1903ff6b585ac395433965d14e1350 261 Pfam PF00809 Pterin binding enzyme 21 232 1.1E-20 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_1876 9acb8fb540c823cb0f67a9c465ec6557 89 Pfam PF14213 STAS-like domain of unknown function (DUF4325) 28 77 3.2E-7 T 13-10-2018 IPR025474 Domain of unknown function DUF4325 TREPR_2551 1542b3a9dc84c09775a176c7c26a69cc 239 SUPERFAMILY SSF52540 3 198 4.84E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2551 1542b3a9dc84c09775a176c7c26a69cc 239 Gene3D G3DSA:3.40.50.300 1 216 1.2E-51 T 13-10-2018 TREPR_2551 1542b3a9dc84c09775a176c7c26a69cc 239 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2551 1542b3a9dc84c09775a176c7c26a69cc 239 Pfam PF00005 ABC transporter 19 149 6.8E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2551 1542b3a9dc84c09775a176c7c26a69cc 239 SMART SM00382 28 214 8.5E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2965 d87cf53daec30d83ccebf855b790e3f3 146 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 50 66 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain TREPR_2965 d87cf53daec30d83ccebf855b790e3f3 146 Gene3D G3DSA:3.40.930.10 1 144 1.8E-35 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_2965 d87cf53daec30d83ccebf855b790e3f3 146 SUPERFAMILY SSF55804 6 142 7.06E-31 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_2965 d87cf53daec30d83ccebf855b790e3f3 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 142 1.4E-28 T 13-10-2018 IPR002178 PTS EIIA type-2 domain TREPR_1360 6b10432912cc5d99b59bdf1d6edfe74b 739 SUPERFAMILY SSF51703 6 451 5.23E-163 T 13-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TREPR_1360 6b10432912cc5d99b59bdf1d6edfe74b 739 Pfam PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit 65 445 6.4E-44 T 13-10-2018 IPR015130 D-Lysine 5,6-aminomutase alpha subunit TREPR_1360 6b10432912cc5d99b59bdf1d6edfe74b 739 SUPERFAMILY SSF52242 599 735 3.3E-28 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_1360 6b10432912cc5d99b59bdf1d6edfe74b 739 Pfam PF02310 B12 binding domain 603 721 8.5E-12 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_1360 6b10432912cc5d99b59bdf1d6edfe74b 739 Gene3D G3DSA:3.30.30.60 505 577 3.8E-25 T 13-10-2018 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily GO:0046983 TREPR_1360 6b10432912cc5d99b59bdf1d6edfe74b 739 Pfam PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase 507 582 8.5E-25 T 13-10-2018 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 TREPR_1360 6b10432912cc5d99b59bdf1d6edfe74b 739 Gene3D G3DSA:3.40.50.280 587 736 4.6E-35 T 13-10-2018 TREPR_1360 6b10432912cc5d99b59bdf1d6edfe74b 739 Gene3D G3DSA:3.20.20.440 18 430 4.8E-200 T 13-10-2018 IPR037086 D-Lysine 5,6-aminomutase alpha subunit superfamily TREPR_3753 30e2babdae3cd18145a2c67ecafb0789 306 SUPERFAMILY SSF53686 3 305 1.57E-100 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TREPR_3753 30e2babdae3cd18145a2c67ecafb0789 306 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 304 1.5E-131 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 TREPR_3753 30e2babdae3cd18145a2c67ecafb0789 306 Gene3D G3DSA:3.40.50.1100 44 143 1.3E-123 T 13-10-2018 TREPR_3753 30e2babdae3cd18145a2c67ecafb0789 306 Gene3D G3DSA:3.40.50.1100 6 300 1.3E-123 T 13-10-2018 TREPR_3753 30e2babdae3cd18145a2c67ecafb0789 306 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 304 9.5E-136 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 TREPR_3753 30e2babdae3cd18145a2c67ecafb0789 306 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 293 4.0E-68 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TREPR_0296 d8f1eea9a1a5cd9fc2f3403b964e21e7 340 Gene3D G3DSA:1.20.1330.10 102 290 8.0E-59 T 13-10-2018 TREPR_0296 d8f1eea9a1a5cd9fc2f3403b964e21e7 340 PRINTS PR00207 Flagellin signature 163 186 5.5E-24 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TREPR_0296 d8f1eea9a1a5cd9fc2f3403b964e21e7 340 PRINTS PR00207 Flagellin signature 128 147 5.5E-24 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TREPR_0296 d8f1eea9a1a5cd9fc2f3403b964e21e7 340 PRINTS PR00207 Flagellin signature 89 106 5.5E-24 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TREPR_0296 d8f1eea9a1a5cd9fc2f3403b964e21e7 340 Pfam PF00669 Bacterial flagellin N-terminal helical region 57 193 1.4E-41 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TREPR_0296 d8f1eea9a1a5cd9fc2f3403b964e21e7 340 Pfam PF00700 Bacterial flagellin C-terminal helical region 255 339 1.4E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TREPR_0296 d8f1eea9a1a5cd9fc2f3403b964e21e7 340 SUPERFAMILY SSF64518 55 340 3.53E-87 T 13-10-2018 TREPR_0296 d8f1eea9a1a5cd9fc2f3403b964e21e7 340 Gene3D G3DSA:1.10.8.410 291 340 6.0E-26 T 13-10-2018 TREPR_2987 8f831e53dcc450b52758c69fe2cd349e 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 272 3.4E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2987 8f831e53dcc450b52758c69fe2cd349e 281 Gene3D G3DSA:1.10.3720.10 11 269 4.4E-56 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2987 8f831e53dcc450b52758c69fe2cd349e 281 SUPERFAMILY SSF161098 15 279 7.33E-61 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2452 6e017340a5ce0d47f59a2ad03abba14f 250 SUPERFAMILY SSF51351 2 248 2.23E-89 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2452 6e017340a5ce0d47f59a2ad03abba14f 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 249 60.609 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2452 6e017340a5ce0d47f59a2ad03abba14f 250 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2452 6e017340a5ce0d47f59a2ad03abba14f 250 Pfam PF00121 Triosephosphate isomerase 6 246 3.6E-92 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2452 6e017340a5ce0d47f59a2ad03abba14f 250 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 241 2.9E-55 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2452 6e017340a5ce0d47f59a2ad03abba14f 250 Gene3D G3DSA:3.20.20.70 1 249 2.0E-97 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1004 5fc6f2fbd0b0e57424f72129c5f60655 417 SUPERFAMILY SSF51726 10 416 1.1E-30 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1004 5fc6f2fbd0b0e57424f72129c5f60655 417 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 184 414 1.3E-12 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_1004 5fc6f2fbd0b0e57424f72129c5f60655 417 Gene3D G3DSA:3.20.20.210 157 414 1.1E-30 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 Gene3D G3DSA:3.40.50.720 1 243 9.1E-83 T 13-10-2018 TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 9.5E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 9.5E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 9.5E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.5E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.5E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 9.5E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 7.6E-95 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 3.6E-65 T 13-10-2018 TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.6E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.6E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 SUPERFAMILY SSF51735 4 243 8.16E-84 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TREPR_1278 51e1ca5782c5409675f011c4a6134eac 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 188 2.9E-4 T 13-10-2018 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 Pfam PF14559 Tetratricopeptide repeat 262 323 9.7E-8 T 13-10-2018 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 Gene3D G3DSA:1.25.40.10 112 452 5.4E-35 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 63 138 2.4E-6 T 13-10-2018 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 Gene3D G3DSA:1.25.40.10 30 111 3.9E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 SUPERFAMILY SSF48452 42 209 3.07E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 Pfam PF13432 Tetratricopeptide repeat 185 247 5.3E-4 T 13-10-2018 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 SMART SM00028 79 112 1.7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 SMART SM00028 215 248 45.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 SMART SM00028 249 282 48.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 SMART SM00028 45 78 0.46 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 SMART SM00028 181 214 5.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 SMART SM00028 342 375 55.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 SMART SM00028 283 316 0.035 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1690 6dac229d65c6cf5017df940408bb4e9d 675 SUPERFAMILY SSF48452 178 374 2.78E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3745 98c537de607261a9c66082e09e1abdb6 347 Gene3D G3DSA:3.40.50.2000 154 329 1.7E-44 T 13-10-2018 TREPR_3745 98c537de607261a9c66082e09e1abdb6 347 SUPERFAMILY SSF53756 42 346 1.47E-50 T 13-10-2018 TREPR_3745 98c537de607261a9c66082e09e1abdb6 347 Pfam PF00534 Glycosyl transferases group 1 175 326 1.9E-25 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_3745 98c537de607261a9c66082e09e1abdb6 347 Gene3D G3DSA:3.40.50.2000 53 342 1.7E-44 T 13-10-2018 TREPR_3745 98c537de607261a9c66082e09e1abdb6 347 Pfam PF13439 Glycosyltransferase Family 4 54 157 2.7E-11 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TREPR_2661 16f2fff4482cb290c3882b5c0ecae362 399 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 TREPR_2661 16f2fff4482cb290c3882b5c0ecae362 399 SMART SM01329 10 395 2.7E-92 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TREPR_2661 16f2fff4482cb290c3882b5c0ecae362 399 Gene3D G3DSA:3.40.718.10 3 399 7.2E-171 T 13-10-2018 TREPR_2661 16f2fff4482cb290c3882b5c0ecae362 399 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 4 399 7.6E-149 T 13-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 TREPR_2661 16f2fff4482cb290c3882b5c0ecae362 399 SUPERFAMILY SSF53659 3 399 9.87E-120 T 13-10-2018 TREPR_2661 16f2fff4482cb290c3882b5c0ecae362 399 PIRSF PIRSF000108 1 399 2.0E-177 T 13-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 TREPR_2661 16f2fff4482cb290c3882b5c0ecae362 399 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 9 391 1.1E-54 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TREPR_0704 3848ecf53fb5d82194977ea83f344c6f 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 292 2.5E-32 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0704 3848ecf53fb5d82194977ea83f344c6f 293 Gene3D G3DSA:1.10.3720.10 82 288 3.3E-25 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0704 3848ecf53fb5d82194977ea83f344c6f 293 SUPERFAMILY SSF161098 87 279 1.44E-30 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0704 3848ecf53fb5d82194977ea83f344c6f 293 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 67 8.4E-12 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_2312 755913f42e93840546d657633c02edd6 188 Pfam PF12833 Helix-turn-helix domain 104 178 4.4E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_2312 755913f42e93840546d657633c02edd6 188 Pfam PF02805 Metal binding domain of Ada 5 69 2.0E-31 T 13-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 TREPR_2312 755913f42e93840546d657633c02edd6 188 PIRSF PIRSF000408 1 184 4.5E-55 T 13-10-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA TREPR_2312 755913f42e93840546d657633c02edd6 188 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 131 173 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TREPR_2312 755913f42e93840546d657633c02edd6 188 Gene3D G3DSA:1.10.10.60 76 184 1.2E-23 T 13-10-2018 TREPR_2312 755913f42e93840546d657633c02edd6 188 SUPERFAMILY SSF57884 2 73 1.57E-31 T 13-10-2018 IPR035451 Ada-like domain superfamily TREPR_2312 755913f42e93840546d657633c02edd6 188 Gene3D G3DSA:3.40.10.10 1 70 3.0E-32 T 13-10-2018 IPR035451 Ada-like domain superfamily TREPR_2312 755913f42e93840546d657633c02edd6 188 SMART SM00342 96 177 2.9E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TREPR_2312 755913f42e93840546d657633c02edd6 188 SUPERFAMILY SSF46689 130 180 5.38E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_2312 755913f42e93840546d657633c02edd6 188 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 146 161 2.1E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_2312 755913f42e93840546d657633c02edd6 188 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 161 177 2.1E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TREPR_0766 0f40adf785a3a7408d9aa21b47ff30c1 487 Gene3D G3DSA:3.40.50.1820 101 469 3.3E-10 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_0766 0f40adf785a3a7408d9aa21b47ff30c1 487 SUPERFAMILY SSF53474 122 320 7.53E-9 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_2513 123416fdc33a334b391bccb1bc1f27f8 789 SUPERFAMILY SSF48208 305 787 5.95E-61 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TREPR_2513 123416fdc33a334b391bccb1bc1f27f8 789 Gene3D G3DSA:2.60.40.10 219 304 5.5E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_2513 123416fdc33a334b391bccb1bc1f27f8 789 Pfam PF02927 Cellulase N-terminal ig-like domain 230 296 1.9E-6 T 13-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 TREPR_2513 123416fdc33a334b391bccb1bc1f27f8 789 SUPERFAMILY SSF81296 215 303 1.82E-10 T 13-10-2018 IPR014756 Immunoglobulin E-set TREPR_2513 123416fdc33a334b391bccb1bc1f27f8 789 Pfam PF00759 Glycosyl hydrolase family 9 309 734 1.8E-24 T 13-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TREPR_1371 8ff6aa9815b54382670c5cf566a8298d 455 Pfam PF01841 Transglutaminase-like superfamily 273 374 1.5E-16 T 13-10-2018 IPR002931 Transglutaminase-like TREPR_1371 8ff6aa9815b54382670c5cf566a8298d 455 Gene3D G3DSA:3.10.620.30 251 381 2.8E-17 T 13-10-2018 TREPR_1371 8ff6aa9815b54382670c5cf566a8298d 455 SUPERFAMILY SSF54001 263 380 7.85E-26 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_1371 8ff6aa9815b54382670c5cf566a8298d 455 SMART SM00460 316 377 6.4E-12 T 13-10-2018 IPR002931 Transglutaminase-like TREPR_2308 6878cc81e06aa6866069c085b1d581d0 139 Pfam PF08281 Sigma-70, region 4 73 125 8.1E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TREPR_2308 6878cc81e06aa6866069c085b1d581d0 139 Gene3D G3DSA:1.10.10.10 71 131 2.6E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2308 6878cc81e06aa6866069c085b1d581d0 139 SUPERFAMILY SSF88659 62 129 1.05E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_2308 6878cc81e06aa6866069c085b1d581d0 139 SUPERFAMILY SSF88946 9 46 9.81E-5 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_2308 6878cc81e06aa6866069c085b1d581d0 139 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 129 4.1E-19 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_1373 53465b159f7d2525172eb1f6e3dae72a 335 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1373 53465b159f7d2525172eb1f6e3dae72a 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 3.5E-14 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1373 53465b159f7d2525172eb1f6e3dae72a 335 SMART SM00382 47 239 7.9E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1373 53465b159f7d2525172eb1f6e3dae72a 335 Pfam PF00005 ABC transporter 39 189 9.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1373 53465b159f7d2525172eb1f6e3dae72a 335 SUPERFAMILY SSF52540 11 261 7.84E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1373 53465b159f7d2525172eb1f6e3dae72a 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 3.0E-25 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1373 53465b159f7d2525172eb1f6e3dae72a 335 Gene3D G3DSA:3.40.50.300 9 335 3.9E-97 T 13-10-2018 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 SUPERFAMILY SSF51735 1 153 1.15E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 Pfam PF02080 TrkA-C domain 407 475 6.4E-13 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 Pfam PF02080 TrkA-C domain 162 228 6.2E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 SUPERFAMILY SSF51735 238 403 5.12E-19 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 Gene3D G3DSA:3.30.70.1450 145 233 3.0E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 Gene3D G3DSA:3.30.70.1450 394 477 2.2E-15 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 SUPERFAMILY SSF116726 389 475 4.05E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 Gene3D G3DSA:3.40.50.720 2 143 3.7E-36 T 13-10-2018 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 SUPERFAMILY SSF116726 143 228 1.22E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.4E-13 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.4E-13 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.4E-13 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.4E-13 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 Pfam PF02254 TrkA-N domain 3 107 4.9E-23 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 Pfam PF02254 TrkA-N domain 240 375 1.8E-16 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TREPR_3242 9f30d80a1a697da5a573cab64785dbd6 481 Gene3D G3DSA:3.40.50.720 236 391 3.7E-30 T 13-10-2018 TREPR_3247 4f889b449a0708eb7f47a888f83563b7 117 SUPERFAMILY SSF81301 37 115 3.27E-11 T 13-10-2018 TREPR_3247 4f889b449a0708eb7f47a888f83563b7 117 Gene3D G3DSA:3.30.460.10 18 113 1.1E-15 T 13-10-2018 TREPR_3247 4f889b449a0708eb7f47a888f83563b7 117 Pfam PF01909 Nucleotidyltransferase domain 40 101 2.0E-6 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TREPR_2531 f4440fda8a1d01ef5c05cae12870f5c0 332 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 311 3.6E-73 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TREPR_2531 f4440fda8a1d01ef5c05cae12870f5c0 332 SUPERFAMILY SSF52540 9 153 1.33E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2531 f4440fda8a1d01ef5c05cae12870f5c0 332 Pfam PF01715 IPP transferase 43 302 4.4E-68 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TREPR_2531 f4440fda8a1d01ef5c05cae12870f5c0 332 Gene3D G3DSA:1.10.20.140 117 199 1.6E-85 T 13-10-2018 TREPR_2531 f4440fda8a1d01ef5c05cae12870f5c0 332 Gene3D G3DSA:3.40.50.300 12 307 1.6E-85 T 13-10-2018 TREPR_2531 f4440fda8a1d01ef5c05cae12870f5c0 332 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 319 26.861 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 Gene3D G3DSA:1.10.10.10 2 75 2.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 Pfam PF07729 FCD domain 102 221 4.5E-21 T 13-10-2018 IPR011711 GntR, C-terminal TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 6.4E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 6.4E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 Gene3D G3DSA:1.20.120.530 95 231 6.3E-25 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 SUPERFAMILY SSF48008 97 228 2.07E-23 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 SUPERFAMILY SSF46785 7 79 3.82E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 2.8E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 SMART SM00895 101 222 1.4E-18 T 13-10-2018 IPR011711 GntR, C-terminal TREPR_1317 746ad45fe10ea09872176073d7c35bc3 243 SMART SM00345 16 75 5.4E-23 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TREPR_0843 ac2f2e50568d9c79218cd7daf8921c42 120 SUPERFAMILY SSF46785 16 114 5.25E-28 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0843 ac2f2e50568d9c79218cd7daf8921c42 120 Gene3D G3DSA:1.10.10.10 6 117 6.3E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0843 ac2f2e50568d9c79218cd7daf8921c42 120 Pfam PF01638 HxlR-like helix-turn-helix 27 113 2.1E-25 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type TREPR_0973 cce86b726f80713e1214d2911de8e0ee 282 SUPERFAMILY SSF51556 4 267 1.84E-35 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_0973 cce86b726f80713e1214d2911de8e0ee 282 Gene3D G3DSA:3.20.20.140 4 272 6.3E-35 T 13-10-2018 TREPR_1055 932da14cd2ce198e3add2e63b2f0b188 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 54 68 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1055 932da14cd2ce198e3add2e63b2f0b188 257 SUPERFAMILY SSF55120 5 247 2.49E-54 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1055 932da14cd2ce198e3add2e63b2f0b188 257 Gene3D G3DSA:3.30.2350.10 1 224 1.8E-62 T 13-10-2018 TREPR_1055 932da14cd2ce198e3add2e63b2f0b188 257 Pfam PF00849 RNA pseudouridylate synthase 16 163 9.2E-32 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1055 932da14cd2ce198e3add2e63b2f0b188 257 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 3 247 1.9E-57 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_0986 adbe56c55ff3f031bf642d22a523c63e 469 SMART SM00267 294 466 5.6E-38 T 13-10-2018 IPR000160 GGDEF domain TREPR_0986 adbe56c55ff3f031bf642d22a523c63e 469 Gene3D G3DSA:3.30.70.270 305 467 2.7E-43 T 13-10-2018 TREPR_0986 adbe56c55ff3f031bf642d22a523c63e 469 SUPERFAMILY SSF55073 311 464 6.12E-38 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_0986 adbe56c55ff3f031bf642d22a523c63e 469 Gene3D G3DSA:3.30.450.20 167 304 1.2E-7 T 13-10-2018 TREPR_0986 adbe56c55ff3f031bf642d22a523c63e 469 Pfam PF00990 Diguanylate cyclase, GGDEF domain 307 460 1.1E-34 T 13-10-2018 IPR000160 GGDEF domain TREPR_0986 adbe56c55ff3f031bf642d22a523c63e 469 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 304 464 1.0E-32 T 13-10-2018 IPR000160 GGDEF domain TREPR_3719 08c03a9fd1fe4829c60543388e445347 319 PIRSF PIRSF000441 118 312 5.0E-50 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 TREPR_3719 08c03a9fd1fe4829c60543388e445347 319 Gene3D G3DSA:1.10.3130.10 36 185 1.4E-44 T 13-10-2018 TREPR_3719 08c03a9fd1fe4829c60543388e445347 319 SUPERFAMILY SSF51161 109 285 2.36E-41 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily TREPR_3719 08c03a9fd1fe4829c60543388e445347 319 Gene3D G3DSA:2.160.10.10 186 300 1.3E-29 T 13-10-2018 TREPR_3719 08c03a9fd1fe4829c60543388e445347 319 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 242 278 1.0E-5 T 13-10-2018 IPR001451 Hexapeptide repeat TREPR_0478 bb5f7532ef5411a50b474153881be739 279 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 2 48 6.6E-6 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_0478 bb5f7532ef5411a50b474153881be739 279 Gene3D G3DSA:1.10.3720.10 67 275 6.9E-21 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0478 bb5f7532ef5411a50b474153881be739 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 3.7E-30 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0478 bb5f7532ef5411a50b474153881be739 279 SUPERFAMILY SSF161098 72 259 9.55E-26 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1445 c11bbf0235a50617e91a07244395d6e8 494 Pfam PF07171 MlrC C-terminus 309 480 1.6E-37 T 13-10-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal TREPR_1445 c11bbf0235a50617e91a07244395d6e8 494 PIRSF PIRSF012702 1 494 1.4E-127 T 13-10-2018 IPR009197 Microcystin LR degradation protein MlrC TREPR_1445 c11bbf0235a50617e91a07244395d6e8 494 Pfam PF07364 Metallopeptidase family M81 2 295 2.7E-94 T 13-10-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal TREPR_3084 384d949714ccf06b16b3d529c30296f5 492 Gene3D G3DSA:3.90.1150.110 13 475 3.7E-144 T 13-10-2018 TREPR_3084 384d949714ccf06b16b3d529c30296f5 492 SUPERFAMILY SSF53383 81 353 5.39E-38 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3084 384d949714ccf06b16b3d529c30296f5 492 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 489 179.515 T 13-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 TREPR_3084 384d949714ccf06b16b3d529c30296f5 492 Pfam PF03841 L-seryl-tRNA selenium transferase 85 471 1.0E-121 T 13-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 TREPR_3084 384d949714ccf06b16b3d529c30296f5 492 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 483 1.1E-149 T 13-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 TREPR_3084 384d949714ccf06b16b3d529c30296f5 492 Gene3D G3DSA:3.40.640.10 97 364 3.7E-144 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3084 384d949714ccf06b16b3d529c30296f5 492 Pfam PF12390 Selenocysteine synthase N terminal 10 49 4.5E-8 T 13-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 TREPR_0134 aed935bc135bb9baad59794a1a10e22b 344 Gene3D G3DSA:3.40.50.720 153 289 6.4E-97 T 13-10-2018 TREPR_0134 aed935bc135bb9baad59794a1a10e22b 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TREPR_0134 aed935bc135bb9baad59794a1a10e22b 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 136 5.3E-24 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TREPR_0134 aed935bc135bb9baad59794a1a10e22b 344 SUPERFAMILY SSF51735 139 308 1.12E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0134 aed935bc135bb9baad59794a1a10e22b 344 Pfam PF00107 Zinc-binding dehydrogenase 177 301 8.4E-18 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TREPR_0134 aed935bc135bb9baad59794a1a10e22b 344 Gene3D G3DSA:3.90.180.10 10 328 6.4E-97 T 13-10-2018 TREPR_0134 aed935bc135bb9baad59794a1a10e22b 344 SMART SM00829 7 341 5.5E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TREPR_0134 aed935bc135bb9baad59794a1a10e22b 344 SUPERFAMILY SSF50129 1 175 7.91E-49 T 13-10-2018 IPR011032 GroES-like superfamily TREPR_3673 75a819912666dee9742d408c6337df1b 467 SUPERFAMILY SSF48557 1 435 2.2E-110 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 TREPR_3673 75a819912666dee9742d408c6337df1b 467 PRINTS PR00145 Argininosuccinate lyase family signature 182 202 2.1E-5 T 13-10-2018 TREPR_3673 75a819912666dee9742d408c6337df1b 467 PRINTS PR00145 Argininosuccinate lyase family signature 259 275 2.1E-5 T 13-10-2018 TREPR_3673 75a819912666dee9742d408c6337df1b 467 PRINTS PR00145 Argininosuccinate lyase family signature 141 163 2.1E-5 T 13-10-2018 TREPR_3673 75a819912666dee9742d408c6337df1b 467 PRINTS PR00145 Argininosuccinate lyase family signature 324 340 2.1E-5 T 13-10-2018 TREPR_3673 75a819912666dee9742d408c6337df1b 467 Gene3D G3DSA:1.10.275.10 2 146 1.1E-45 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal TREPR_3673 75a819912666dee9742d408c6337df1b 467 Pfam PF00206 Lyase 9 347 4.6E-76 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal TREPR_3673 75a819912666dee9742d408c6337df1b 467 ProSitePatterns PS00163 Fumarate lyases signature. 324 333 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TREPR_3673 75a819912666dee9742d408c6337df1b 467 PRINTS PR00149 Fumarate lyase superfamily signature 324 340 1.5E-31 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_3673 75a819912666dee9742d408c6337df1b 467 PRINTS PR00149 Fumarate lyase superfamily signature 142 160 1.5E-31 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_3673 75a819912666dee9742d408c6337df1b 467 PRINTS PR00149 Fumarate lyase superfamily signature 187 205 1.5E-31 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_3673 75a819912666dee9742d408c6337df1b 467 PRINTS PR00149 Fumarate lyase superfamily signature 278 305 1.5E-31 T 13-10-2018 IPR000362 Fumarate lyase family TREPR_3673 75a819912666dee9742d408c6337df1b 467 Gene3D G3DSA:1.20.200.10 147 413 4.9E-95 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 Gene3D G3DSA:3.40.50.300 391 588 3.8E-44 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 Gene3D G3DSA:3.40.50.300 203 390 2.3E-35 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 SUPERFAMILY SSF52540 324 563 5.02E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 Pfam PF04851 Type III restriction enzyme, res subunit 211 365 1.1E-13 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 SMART SM00490 461 538 4.1E-10 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 494 512 1.2E-36 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 227 249 1.2E-36 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 7 27 1.2E-36 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 93 112 1.2E-36 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 513 538 1.2E-36 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 394 416 1.2E-36 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 448 470 1.2E-36 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 329 349 1.2E-36 T 13-10-2018 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 Pfam PF13625 Helicase conserved C-terminal domain 9 105 1.2E-36 T 13-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 SMART SM00487 209 396 2.2E-19 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 390 574 5.7E-47 T 13-10-2018 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 TREPR_2945 151b04cb9c84ff1c8ef81418c9cec3b1 599 SUPERFAMILY SSF52540 171 383 2.35E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0121 002687effc87b695cace1c2c2bf5fe07 276 Gene3D G3DSA:3.90.1580.10 27 274 7.3E-77 T 13-10-2018 TREPR_0121 002687effc87b695cace1c2c2bf5fe07 276 Pfam PF03781 Sulfatase-modifying factor enzyme 1 35 273 2.6E-53 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TREPR_0121 002687effc87b695cace1c2c2bf5fe07 276 SUPERFAMILY SSF56436 34 274 4.47E-68 T 13-10-2018 IPR016187 C-type lectin fold TREPR_3656 82ca477fdf9e925e63896a48dbd2ebd8 491 Pfam PF13635 Domain of unknown function (DUF4143) 310 420 2.6E-7 T 13-10-2018 IPR025420 Domain of unknown function DUF4143 TREPR_3656 82ca477fdf9e925e63896a48dbd2ebd8 491 Pfam PF13173 AAA domain 35 167 8.1E-25 T 13-10-2018 TREPR_3656 82ca477fdf9e925e63896a48dbd2ebd8 491 SUPERFAMILY SSF52540 27 168 8.95E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2223 a87cdeb252166d83333ce522544a2c2b 455 Gene3D G3DSA:3.40.50.300 5 134 6.1E-9 T 13-10-2018 TREPR_2223 a87cdeb252166d83333ce522544a2c2b 455 Gene3D G3DSA:3.40.50.300 145 267 2.6E-20 T 13-10-2018 TREPR_2223 a87cdeb252166d83333ce522544a2c2b 455 Pfam PF13177 DNA polymerase III, delta subunit 10 266 4.5E-28 T 13-10-2018 TREPR_2223 a87cdeb252166d83333ce522544a2c2b 455 SUPERFAMILY SSF52540 23 283 1.02E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1400 376d478f85fb55bbfbd2695fc7b3fc08 4977 SUPERFAMILY SSF81296 3864 3937 4.2E-5 T 13-10-2018 IPR014756 Immunoglobulin E-set TREPR_1400 376d478f85fb55bbfbd2695fc7b3fc08 4977 Gene3D G3DSA:2.60.40.10 3458 3548 2.8E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1400 376d478f85fb55bbfbd2695fc7b3fc08 4977 SUPERFAMILY SSF49265 3454 3544 2.3E-7 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TREPR_1400 376d478f85fb55bbfbd2695fc7b3fc08 4977 Gene3D G3DSA:2.60.40.10 4033 4123 8.7E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1400 376d478f85fb55bbfbd2695fc7b3fc08 4977 Gene3D G3DSA:2.60.40.10 3862 3938 7.0E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_1400 376d478f85fb55bbfbd2695fc7b3fc08 4977 SUPERFAMILY SSF81296 3655 3724 9.62E-5 T 13-10-2018 IPR014756 Immunoglobulin E-set TREPR_1400 376d478f85fb55bbfbd2695fc7b3fc08 4977 Pfam PF12245 Bacterial Ig-like domain (group 3) 311 325 0.79 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_1400 376d478f85fb55bbfbd2695fc7b3fc08 4977 Pfam PF12245 Bacterial Ig-like domain (group 3) 1212 1233 4.1 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_0267 5ff0f67d39b2d4172c97393cce16978e 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 311 3.1E-49 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 Gene3D G3DSA:1.10.15.40 368 415 3.6E-6 T 13-10-2018 TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 Gene3D G3DSA:3.40.50.1780 58 237 5.8E-34 T 13-10-2018 TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 75 306 6.6E-42 T 13-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 Gene3D G3DSA:3.30.70.20 9 57 5.8E-34 T 13-10-2018 TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 SUPERFAMILY SSF55785 414 521 4.57E-6 T 13-10-2018 IPR035965 PAS domain superfamily TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 Gene3D G3DSA:3.30.450.20 416 520 4.6E-6 T 13-10-2018 TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 42 53 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 Pfam PF04060 Putative Fe-S cluster 378 405 1.6E-8 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 SUPERFAMILY SSF54862 10 72 1.97E-15 T 13-10-2018 TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 Gene3D G3DSA:3.40.950.10 115 252 5.8E-34 T 13-10-2018 TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 SUPERFAMILY SSF53920 42 335 4.32E-53 T 13-10-2018 IPR009016 Iron hydrogenase TREPR_3122 1f6784f1727bfd51f0678469788c8584 583 Pfam PF13188 PAS domain 417 462 6.6E-5 T 13-10-2018 IPR000014 PAS domain TREPR_2545 b25c11ecad98889f6b37df650f76b39a 455 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 15 454 7.5E-110 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TREPR_2545 b25c11ecad98889f6b37df650f76b39a 455 Gene3D G3DSA:3.40.50.720 137 253 7.3E-5 T 13-10-2018 TREPR_2545 b25c11ecad98889f6b37df650f76b39a 455 Pfam PF02397 Bacterial sugar transferase 269 450 1.8E-60 T 13-10-2018 IPR003362 Bacterial sugar transferase TREPR_0791 e638f4c7e532476c7c3e5f877a2cb52a 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 1.7E-7 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TREPR_0791 e638f4c7e532476c7c3e5f877a2cb52a 129 SUPERFAMILY SSF54593 3 127 3.44E-17 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TREPR_0791 e638f4c7e532476c7c3e5f877a2cb52a 129 Gene3D G3DSA:3.10.180.10 7 127 8.8E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TREPR_0281 b0b42ef32e3ea6318d7dcb5b7c49646f 345 Gene3D G3DSA:3.30.70.270 178 344 5.7E-34 T 13-10-2018 TREPR_0281 b0b42ef32e3ea6318d7dcb5b7c49646f 345 SMART SM00267 175 345 2.8E-20 T 13-10-2018 IPR000160 GGDEF domain TREPR_0281 b0b42ef32e3ea6318d7dcb5b7c49646f 345 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 184 342 2.8E-28 T 13-10-2018 IPR000160 GGDEF domain TREPR_0281 b0b42ef32e3ea6318d7dcb5b7c49646f 345 Pfam PF00990 Diguanylate cyclase, GGDEF domain 186 341 1.8E-28 T 13-10-2018 IPR000160 GGDEF domain TREPR_0281 b0b42ef32e3ea6318d7dcb5b7c49646f 345 SUPERFAMILY SSF55073 191 340 1.31E-25 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_1143 86633012c8c4021a39604f13a6a9aa0a 334 SUPERFAMILY SSF53850 123 321 3.98E-11 T 13-10-2018 TREPR_1143 86633012c8c4021a39604f13a6a9aa0a 334 Pfam PF12728 Helix-turn-helix domain 5 52 1.1E-14 T 13-10-2018 TREPR_1143 86633012c8c4021a39604f13a6a9aa0a 334 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 5 52 1.0E-14 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 TREPR_1143 86633012c8c4021a39604f13a6a9aa0a 334 Gene3D G3DSA:3.40.190.10 186 258 1.6E-5 T 13-10-2018 TREPR_1143 86633012c8c4021a39604f13a6a9aa0a 334 Pfam PF12727 PBP superfamily domain 124 300 1.4E-49 T 13-10-2018 IPR024370 PBP domain TREPR_1143 86633012c8c4021a39604f13a6a9aa0a 334 Gene3D G3DSA:1.10.1660.10 2 53 1.4E-6 T 13-10-2018 TREPR_3037 51f6e11d9b5296420b06c5d4ddf2d784 541 SUPERFAMILY SSF161098 282 537 1.31E-46 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3037 51f6e11d9b5296420b06c5d4ddf2d784 541 Gene3D G3DSA:1.10.3720.10 286 540 8.8E-45 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3037 51f6e11d9b5296420b06c5d4ddf2d784 541 Gene3D G3DSA:1.10.3720.10 1 269 3.4E-62 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3037 51f6e11d9b5296420b06c5d4ddf2d784 541 SUPERFAMILY SSF161098 4 260 5.34E-53 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3037 51f6e11d9b5296420b06c5d4ddf2d784 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 261 6.3E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3037 51f6e11d9b5296420b06c5d4ddf2d784 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 356 533 1.8E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2654 1d34c1499e1f9626e9afa1529e06b0f3 200 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 1 197 5.3E-46 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_2654 1d34c1499e1f9626e9afa1529e06b0f3 200 Pfam PF01813 ATP synthase subunit D 10 192 5.6E-41 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_2357 dcacccb912c0fc52c5f216b1d09690ee 416 Gene3D G3DSA:3.90.1150.10 293 416 7.7E-32 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_2357 dcacccb912c0fc52c5f216b1d09690ee 416 SUPERFAMILY SSF53383 5 414 1.01E-99 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_2357 dcacccb912c0fc52c5f216b1d09690ee 416 Gene3D G3DSA:3.40.640.10 1 290 3.9E-88 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_2357 dcacccb912c0fc52c5f216b1d09690ee 416 PIRSF PIRSF000390 2 416 3.3E-92 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TREPR_2357 dcacccb912c0fc52c5f216b1d09690ee 416 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 411 9.2E-104 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 Gene3D G3DSA:3.10.50.40 159 258 1.0E-65 T 13-10-2018 TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 SUPERFAMILY SSF109998 260 441 4.12E-33 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 Gene3D G3DSA:1.10.3120.10 125 437 1.0E-65 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 SUPERFAMILY SSF102735 6 139 1.19E-26 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 TIGRFAM TIGR00115 tig: trigger factor 14 433 4.0E-107 T 13-10-2018 IPR005215 Trigger factor GO:0015031 TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 274 434 4.3E-32 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 Hamap MF_00303 Trigger factor [tig]. 3 440 18.269 T 13-10-2018 IPR005215 Trigger factor GO:0015031 TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 169 244 8.6E-8 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 SUPERFAMILY SSF54534 141 258 7.66E-21 T 13-10-2018 TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 PIRSF PIRSF003095 3 453 7.3E-103 T 13-10-2018 IPR005215 Trigger factor GO:0015031 TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 Gene3D G3DSA:3.30.70.1050 3 124 1.3E-26 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TREPR_2598 ea08f6681823050dc1be69d1dc1dc285 453 Pfam PF05697 Bacterial trigger factor protein (TF) 6 152 2.5E-34 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 TREPR_2113 04005ccc1f22bafd5d0f16e08df0d799 857 Pfam PF07581 The GLUG motif 648 673 0.002 T 13-10-2018 IPR011493 GLUG TREPR_2113 04005ccc1f22bafd5d0f16e08df0d799 857 Gene3D G3DSA:2.160.20.110 560 826 5.8E-40 T 13-10-2018 TREPR_0418 8831a64e6e82369a858f8c6fd3123c69 266 Pfam PF03781 Sulfatase-modifying factor enzyme 1 30 265 4.2E-55 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TREPR_0418 8831a64e6e82369a858f8c6fd3123c69 266 SUPERFAMILY SSF56436 31 266 9.18E-73 T 13-10-2018 IPR016187 C-type lectin fold TREPR_0418 8831a64e6e82369a858f8c6fd3123c69 266 Gene3D G3DSA:3.90.1580.10 22 266 4.5E-91 T 13-10-2018 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Gene3D G3DSA:3.30.70.20 142 204 1.1E-151 T 13-10-2018 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 139 516 9.9E-155 T 13-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 2.9E-19 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 223 513 4.6E-92 T 13-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 SUPERFAMILY SSF53920 189 574 8.76E-125 T 13-10-2018 IPR009016 Iron hydrogenase TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 SMART SM00902 518 577 3.8E-25 T 13-10-2018 IPR003149 Iron hydrogenase, small subunit TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 2.9E-17 T 13-10-2018 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Pfam PF02256 Iron hydrogenase small subunit 521 576 4.3E-27 T 13-10-2018 IPR003149 Iron hydrogenase, small subunit TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 SUPERFAMILY SSF54862 77 213 6.28E-37 T 13-10-2018 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 SUPERFAMILY SSF54292 1 74 1.28E-18 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Gene3D G3DSA:3.40.50.1780 205 516 1.1E-151 T 13-10-2018 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Gene3D G3DSA:4.10.260.20 519 581 3.4E-21 T 13-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Gene3D G3DSA:3.40.950.10 271 507 1.1E-151 T 13-10-2018 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 SMART SM00929 83 123 4.2E-19 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Gene3D G3DSA:3.10.20.740 1 123 4.8E-42 T 13-10-2018 TREPR_3594 4a33136d767601dd79ba4947d9ca5db8 581 Pfam PF13187 4Fe-4S dicluster domain 145 204 1.4E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_1418 d909084ce7c02e7cd1e2d31103b1c5c1 114 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 104 3.9E-15 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TREPR_1418 d909084ce7c02e7cd1e2d31103b1c5c1 114 SUPERFAMILY SSF50118 2 105 2.83E-26 T 13-10-2018 TREPR_1418 d909084ce7c02e7cd1e2d31103b1c5c1 114 Gene3D G3DSA:2.30.30.110 1 111 2.0E-27 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TREPR_1945 a2abbb57a530d59b785a848b1ded4226 91 TIGRFAM TIGR00029 S20: ribosomal protein bS20 5 87 1.2E-21 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1945 a2abbb57a530d59b785a848b1ded4226 91 Gene3D G3DSA:1.20.58.110 2 91 5.2E-24 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1945 a2abbb57a530d59b785a848b1ded4226 91 Pfam PF01649 Ribosomal protein S20 5 85 2.2E-22 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1945 a2abbb57a530d59b785a848b1ded4226 91 SUPERFAMILY SSF46992 6 87 2.62E-24 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1945 a2abbb57a530d59b785a848b1ded4226 91 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 15 89 2.0E-11 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1945 a2abbb57a530d59b785a848b1ded4226 91 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 86 15.44 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1939 03dbcdedf9394afd0cc6576da09b93f4 288 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 15 278 3.2E-45 T 13-10-2018 IPR018708 Protein of unknown function DUF2225 TREPR_3633 0a7203fc87f881922c55d1ea1b055851 83 Pfam PF13711 Domain of unknown function (DUF4160) 9 68 8.2E-17 T 13-10-2018 IPR025427 Protein of unknown function DUF4160 TREPR_3846 febb035ba7a013678667a26fef76f8fd 376 Pfam PF01636 Phosphotransferase enzyme family 25 268 1.3E-13 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase TREPR_3846 febb035ba7a013678667a26fef76f8fd 376 SUPERFAMILY SSF56112 8 351 3.06E-28 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily TREPR_0955 bb183874f7383d609a3903353f7ab67b 275 Gene3D G3DSA:3.40.190.10 48 267 1.8E-64 T 13-10-2018 TREPR_0955 bb183874f7383d609a3903353f7ab67b 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 267 1.8E-58 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0955 bb183874f7383d609a3903353f7ab67b 275 SMART SM00062 46 269 2.9E-57 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_0955 bb183874f7383d609a3903353f7ab67b 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 69 82 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site TREPR_0955 bb183874f7383d609a3903353f7ab67b 275 SUPERFAMILY SSF53850 5 270 3.84E-63 T 13-10-2018 TREPR_0955 bb183874f7383d609a3903353f7ab67b 275 Gene3D G3DSA:3.40.190.10 132 225 1.8E-64 T 13-10-2018 TREPR_2880 ca46f1de76143e2eb0c54efd2d7fadf6 554 SUPERFAMILY SSF51569 9 297 1.43E-72 T 13-10-2018 TREPR_2880 ca46f1de76143e2eb0c54efd2d7fadf6 554 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_2880 ca46f1de76143e2eb0c54efd2d7fadf6 554 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 207 220 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TREPR_2880 ca46f1de76143e2eb0c54efd2d7fadf6 554 Gene3D G3DSA:3.20.20.70 5 322 1.0E-95 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2880 ca46f1de76143e2eb0c54efd2d7fadf6 554 Pfam PF00682 HMGL-like 12 277 2.8E-67 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TREPR_2329 a7f13c879b6c316d17b177e158de4a97 436 Pfam PF01098 Cell cycle protein 13 205 5.2E-37 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2329 a7f13c879b6c316d17b177e158de4a97 436 Pfam PF01098 Cell cycle protein 226 432 7.5E-55 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2329 a7f13c879b6c316d17b177e158de4a97 436 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 436 25.548 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2329 a7f13c879b6c316d17b177e158de4a97 436 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 391 415 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2329 a7f13c879b6c316d17b177e158de4a97 436 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 433 3.0E-116 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_1795 258802255c6209e624fd7736a4908705 827 Gene3D G3DSA:1.10.730.10 394 600 5.8E-37 T 13-10-2018 TREPR_1795 258802255c6209e624fd7736a4908705 827 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 1.4E-31 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TREPR_1795 258802255c6209e624fd7736a4908705 827 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 1.4E-31 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TREPR_1795 258802255c6209e624fd7736a4908705 827 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 1.4E-31 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TREPR_1795 258802255c6209e624fd7736a4908705 827 PRINTS PR01041 Methionyl-tRNA synthetase signature 255 266 1.4E-31 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TREPR_1795 258802255c6209e624fd7736a4908705 827 PRINTS PR01041 Methionyl-tRNA synthetase signature 398 409 1.4E-31 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TREPR_1795 258802255c6209e624fd7736a4908705 827 PRINTS PR01041 Methionyl-tRNA synthetase signature 303 318 1.4E-31 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TREPR_1795 258802255c6209e624fd7736a4908705 827 SUPERFAMILY SSF50249 667 779 9.55E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1795 258802255c6209e624fd7736a4908705 827 Gene3D G3DSA:3.40.50.620 8 393 3.5E-165 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1795 258802255c6209e624fd7736a4908705 827 Pfam PF09334 tRNA synthetases class I (M) 8 411 5.6E-154 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_1795 258802255c6209e624fd7736a4908705 827 Gene3D G3DSA:2.20.28.20 141 175 3.5E-165 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_1795 258802255c6209e624fd7736a4908705 827 Gene3D G3DSA:2.40.50.140 665 809 3.0E-30 T 13-10-2018 TREPR_1795 258802255c6209e624fd7736a4908705 827 SUPERFAMILY SSF57770 141 175 3.66E-12 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_1795 258802255c6209e624fd7736a4908705 827 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 3.2E-173 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TREPR_1795 258802255c6209e624fd7736a4908705 827 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 598 38.632 T 13-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TREPR_1795 258802255c6209e624fd7736a4908705 827 SUPERFAMILY SSF52374 5 397 2.32E-87 T 13-10-2018 TREPR_1795 258802255c6209e624fd7736a4908705 827 Pfam PF01588 Putative tRNA binding domain 670 760 5.3E-22 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 TREPR_1795 258802255c6209e624fd7736a4908705 827 SUPERFAMILY SSF47323 399 555 1.21E-30 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_1795 258802255c6209e624fd7736a4908705 827 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_0952 61f855462e93c33135bb937dee10118e 107 Pfam PF01909 Nucleotidyltransferase domain 20 103 3.1E-13 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TREPR_0952 61f855462e93c33135bb937dee10118e 107 SUPERFAMILY SSF81301 13 95 8.33E-16 T 13-10-2018 TREPR_0952 61f855462e93c33135bb937dee10118e 107 Gene3D G3DSA:3.30.460.10 5 102 2.8E-21 T 13-10-2018 TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 977 1118 3.7E-12 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 Pfam PF00207 Alpha-2-macroglobulin family 1186 1285 4.3E-6 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 SMART SM01360 1182 1285 6.3E-12 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 Gene3D G3DSA:1.50.10.20 1392 1643 4.5E-28 T 13-10-2018 TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 Pfam PF13205 Bacterial Ig-like domain 47 109 1.5E-6 T 13-10-2018 IPR032812 SbsA, Ig-like domain TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 498 606 8.9E-16 T 13-10-2018 TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 SUPERFAMILY SSF48239 1395 1641 2.69E-36 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 SMART SM01359 977 1119 6.2E-28 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1397 1420 4.5E-6 T 13-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming TREPR_2524 6a4c7b37a3b05e858f2612bb2dd13b98 1849 Pfam PF01835 MG2 domain 614 700 6.0E-10 T 13-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 TREPR_0323 873c099b330049fb8a8a014186bc8239 74 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 44 6.2E-6 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_0323 873c099b330049fb8a8a014186bc8239 74 Gene3D G3DSA:2.10.260.10 1 74 4.4E-25 T 13-10-2018 TREPR_0323 873c099b330049fb8a8a014186bc8239 74 SUPERFAMILY SSF89447 3 66 4.34E-11 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily TREPR_0213 873c099b330049fb8a8a014186bc8239 74 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 44 6.2E-6 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_0213 873c099b330049fb8a8a014186bc8239 74 Gene3D G3DSA:2.10.260.10 1 74 4.4E-25 T 13-10-2018 TREPR_0213 873c099b330049fb8a8a014186bc8239 74 SUPERFAMILY SSF89447 3 66 4.34E-11 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily TREPR_1601 62646902dca073a2d9edae4eff1c04b6 449 Pfam PF13416 Bacterial extracellular solute-binding protein 57 377 1.3E-29 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_1601 62646902dca073a2d9edae4eff1c04b6 449 Gene3D G3DSA:3.40.190.10 155 433 2.4E-65 T 13-10-2018 TREPR_1601 62646902dca073a2d9edae4eff1c04b6 449 Gene3D G3DSA:3.40.190.10 57 403 2.4E-65 T 13-10-2018 TREPR_1601 62646902dca073a2d9edae4eff1c04b6 449 SUPERFAMILY SSF53850 35 445 2.27E-50 T 13-10-2018 TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 SUPERFAMILY SSF51735 4 193 4.52E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 TIGRFAM TIGR00978 asd_EA: aspartate-semialdehyde dehydrogenase 5 365 5.1E-110 T 13-10-2018 IPR005676 Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking GO:0050661|GO:0055114 TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 SUPERFAMILY SSF55347 167 352 2.08E-37 T 13-10-2018 TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 178 350 2.3E-37 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 Gene3D G3DSA:3.40.50.720 6 365 1.5E-134 T 13-10-2018 TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 Gene3D G3DSA:3.30.360.10 168 347 1.5E-134 T 13-10-2018 TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 144 1.1E-23 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 249 263 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 PIRSF PIRSF000148 3 370 1.4E-93 T 13-10-2018 TREPR_2977 d223c594db75f9a7388a7a8228c06c71 371 SMART SM00859 5 147 1.3E-23 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TREPR_0953 429a746a1e6c225f9d385da2aaa53665 249 PIRSF PIRSF039085 1 248 2.0E-105 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TREPR_0953 429a746a1e6c225f9d385da2aaa53665 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0953 429a746a1e6c225f9d385da2aaa53665 249 Pfam PF00005 ABC transporter 19 172 1.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0953 429a746a1e6c225f9d385da2aaa53665 249 Gene3D G3DSA:3.40.50.300 1 248 1.3E-73 T 13-10-2018 TREPR_0953 429a746a1e6c225f9d385da2aaa53665 249 SUPERFAMILY SSF52540 3 242 1.42E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0953 429a746a1e6c225f9d385da2aaa53665 249 SMART SM00382 28 220 2.9E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2899 a825b63709fb3fa69c91f03be790cf50 373 Gene3D G3DSA:3.20.20.210 9 373 1.1E-40 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_2899 a825b63709fb3fa69c91f03be790cf50 373 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 174 373 9.2E-16 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_2899 a825b63709fb3fa69c91f03be790cf50 373 SUPERFAMILY SSF51726 142 373 4.71E-23 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_0676 c2f156e396b35aec48a807e51277aa2f 414 Gene3D G3DSA:3.20.20.70 142 358 1.7E-15 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0676 c2f156e396b35aec48a807e51277aa2f 414 Pfam PF04055 Radical SAM superfamily 163 303 4.3E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_0676 c2f156e396b35aec48a807e51277aa2f 414 SUPERFAMILY SSF102114 162 363 1.03E-20 T 13-10-2018 TREPR_2723 8124aff002037e92e109da6a64be1e57 200 Pfam PF01592 NifU-like N terminal domain 6 129 6.5E-38 T 13-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 TREPR_2723 8124aff002037e92e109da6a64be1e57 200 Gene3D G3DSA:3.90.1010.10 2 141 2.4E-42 T 13-10-2018 TREPR_2723 8124aff002037e92e109da6a64be1e57 200 Gene3D G3DSA:1.10.10.1100 142 195 6.8E-13 T 13-10-2018 TREPR_2723 8124aff002037e92e109da6a64be1e57 200 SUPERFAMILY SSF82649 4 131 1.18E-33 T 13-10-2018 TREPR_2723 8124aff002037e92e109da6a64be1e57 200 Pfam PF04324 BFD-like [2Fe-2S] binding domain 141 192 1.5E-13 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TREPR_1790 cfd9a43c84cb476b63602ce5ece0aaf6 109 Gene3D G3DSA:1.10.260.40 1 72 4.6E-16 T 13-10-2018 TREPR_1790 cfd9a43c84cb476b63602ce5ece0aaf6 109 Pfam PF12844 Helix-turn-helix domain 10 67 3.7E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1790 cfd9a43c84cb476b63602ce5ece0aaf6 109 SUPERFAMILY SSF47413 4 70 7.32E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_1790 cfd9a43c84cb476b63602ce5ece0aaf6 109 SMART SM00530 11 66 4.8E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3480 0a45f46ce92cb378417ff55f6d3ce0aa 265 Pfam PF00460 Flagella basal body rod protein 5 35 3.0E-12 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TREPR_3480 0a45f46ce92cb378417ff55f6d3ce0aa 265 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 186 263 1.6E-23 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TREPR_3480 0a45f46ce92cb378417ff55f6d3ce0aa 265 SUPERFAMILY SSF117143 93 225 1.23E-34 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TREPR_3480 0a45f46ce92cb378417ff55f6d3ce0aa 265 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TREPR_3480 0a45f46ce92cb378417ff55f6d3ce0aa 265 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 150 246 3.0E-28 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TREPR_3480 0a45f46ce92cb378417ff55f6d3ce0aa 265 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 4.9E-47 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TREPR_3480 0a45f46ce92cb378417ff55f6d3ce0aa 265 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 263 5.2E-109 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 TREPR_3132 c4ae230db592342cfa05fc7b62eb3351 257 Gene3D G3DSA:3.40.50.300 3 256 1.2E-49 T 13-10-2018 TREPR_3132 c4ae230db592342cfa05fc7b62eb3351 257 SUPERFAMILY SSF52540 1 254 3.23E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3132 c4ae230db592342cfa05fc7b62eb3351 257 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 234 2.8E-15 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_3132 c4ae230db592342cfa05fc7b62eb3351 257 PIRSF PIRSF005647 3 257 1.3E-62 T 13-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type TREPR_0606 1b456477c0360d10c03ddca19c8467bc 131 SUPERFAMILY SSF88723 1 130 9.81E-33 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_0606 1b456477c0360d10c03ddca19c8467bc 131 Gene3D G3DSA:3.40.50.1010 1 131 1.5E-33 T 13-10-2018 TREPR_0606 1b456477c0360d10c03ddca19c8467bc 131 Pfam PF01850 PIN domain 2 123 1.7E-15 T 13-10-2018 IPR002716 PIN domain TREPR_0449 2fe0e6709d1f75ded1bef46836c70d96 203 TIGRFAM TIGR00615 recR: recombination protein RecR 10 200 5.7E-75 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TREPR_0449 2fe0e6709d1f75ded1bef46836c70d96 203 Gene3D G3DSA:3.40.1360.10 82 203 7.3E-43 T 13-10-2018 TREPR_0449 2fe0e6709d1f75ded1bef46836c70d96 203 Pfam PF13662 Toprim domain 85 176 2.0E-20 T 13-10-2018 IPR006171 TOPRIM domain TREPR_0449 2fe0e6709d1f75ded1bef46836c70d96 203 Gene3D G3DSA:1.10.8.420 9 57 1.2E-13 T 13-10-2018 TREPR_0449 2fe0e6709d1f75ded1bef46836c70d96 203 Hamap MF_00017 Recombination protein RecR [recR]. 1 203 86.833 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TREPR_0449 2fe0e6709d1f75ded1bef46836c70d96 203 SUPERFAMILY SSF111304 10 203 3.53E-70 T 13-10-2018 IPR023627 Recombination protein RecR TREPR_0449 2fe0e6709d1f75ded1bef46836c70d96 203 Pfam PF02132 RecR protein 45 83 1.3E-15 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger TREPR_0449 2fe0e6709d1f75ded1bef46836c70d96 203 ProSitePatterns PS01300 RecR protein signature. 62 83 - T 13-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 TREPR_0449 2fe0e6709d1f75ded1bef46836c70d96 203 SMART SM00493 85 170 1.4E-9 T 13-10-2018 IPR006171 TOPRIM domain TREPR_2127 1e891ae838d778512c40c0f4ab70e188 323 SUPERFAMILY SSF52540 7 255 1.2E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2127 1e891ae838d778512c40c0f4ab70e188 323 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2127 1e891ae838d778512c40c0f4ab70e188 323 Gene3D G3DSA:3.40.50.300 6 323 4.6E-98 T 13-10-2018 TREPR_2127 1e891ae838d778512c40c0f4ab70e188 323 Pfam PF00005 ABC transporter 33 183 3.1E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2127 1e891ae838d778512c40c0f4ab70e188 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 321 1.2E-23 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_2127 1e891ae838d778512c40c0f4ab70e188 323 SMART SM00382 41 232 2.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2127 1e891ae838d778512c40c0f4ab70e188 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 302 1.9E-16 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_2738 9d01817b7a03add9238d5f05f776c2fc 383 Pfam PF06114 IrrE N-terminal-like domain 177 296 1.2E-18 T 13-10-2018 IPR010359 IrrE N-terminal-like domain TREPR_2738 9d01817b7a03add9238d5f05f776c2fc 383 SUPERFAMILY SSF47413 10 57 2.9E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_2738 9d01817b7a03add9238d5f05f776c2fc 383 Gene3D G3DSA:3.40.390.50 167 261 2.0E-5 T 13-10-2018 TREPR_1510 2cfc4b1d7a9c1112cc3ed855cdce3744 559 Gene3D G3DSA:1.10.3720.10 299 555 3.1E-44 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1510 2cfc4b1d7a9c1112cc3ed855cdce3744 559 Gene3D G3DSA:1.10.3720.10 16 284 1.9E-51 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1510 2cfc4b1d7a9c1112cc3ed855cdce3744 559 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 276 3.1E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1510 2cfc4b1d7a9c1112cc3ed855cdce3744 559 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 372 547 4.1E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1510 2cfc4b1d7a9c1112cc3ed855cdce3744 559 SUPERFAMILY SSF161098 24 272 3.16E-48 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1510 2cfc4b1d7a9c1112cc3ed855cdce3744 559 SUPERFAMILY SSF161098 297 553 9.35E-46 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2130 572381d318a4040f01301fe2a9a2ead7 317 Gene3D G3DSA:1.10.3720.10 85 306 1.8E-19 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2130 572381d318a4040f01301fe2a9a2ead7 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 314 5.5E-41 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2130 572381d318a4040f01301fe2a9a2ead7 317 SUPERFAMILY SSF161098 90 297 1.14E-15 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3089 a7f42a4a1991d7987f22514bd21ccce2 268 Pfam PF00005 ABC transporter 40 191 2.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3089 a7f42a4a1991d7987f22514bd21ccce2 268 SMART SM00382 49 239 3.8E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3089 a7f42a4a1991d7987f22514bd21ccce2 268 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3089 a7f42a4a1991d7987f22514bd21ccce2 268 SUPERFAMILY SSF52540 25 261 2.07E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3089 a7f42a4a1991d7987f22514bd21ccce2 268 PIRSF PIRSF039085 20 267 8.2E-100 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TREPR_3089 a7f42a4a1991d7987f22514bd21ccce2 268 Gene3D G3DSA:3.40.50.300 22 267 3.6E-71 T 13-10-2018 TREPR_0344 a5e7128d84c9dca735904f97d08d54a4 323 Gene3D G3DSA:3.90.25.10 174 317 1.4E-99 T 13-10-2018 TREPR_0344 a5e7128d84c9dca735904f97d08d54a4 323 SUPERFAMILY SSF51735 2 322 3.75E-82 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0344 a5e7128d84c9dca735904f97d08d54a4 323 Gene3D G3DSA:3.40.50.720 4 305 1.4E-99 T 13-10-2018 TREPR_0344 a5e7128d84c9dca735904f97d08d54a4 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 243 5.3E-51 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TREPR_2206 f46d1d2da17ee42380d1aa9a4298d4f3 395 Gene3D G3DSA:1.10.150.130 118 204 1.8E-19 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal TREPR_2206 f46d1d2da17ee42380d1aa9a4298d4f3 395 Gene3D G3DSA:1.10.443.10 208 387 3.1E-51 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_2206 f46d1d2da17ee42380d1aa9a4298d4f3 395 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 122 200 7.6E-15 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TREPR_2206 f46d1d2da17ee42380d1aa9a4298d4f3 395 Pfam PF00589 Phage integrase family 220 376 1.6E-40 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TREPR_2206 f46d1d2da17ee42380d1aa9a4298d4f3 395 SUPERFAMILY SSF56349 126 376 1.21E-51 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_1233 233d13600616e1b974e4fbcaa2667ee4 188 PRINTS PR00125 ATP synthase delta subunit signature 133 148 3.7E-8 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1233 233d13600616e1b974e4fbcaa2667ee4 188 PRINTS PR00125 ATP synthase delta subunit signature 148 166 3.7E-8 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1233 233d13600616e1b974e4fbcaa2667ee4 188 Pfam PF00213 ATP synthase delta (OSCP) subunit 55 173 3.9E-23 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1233 233d13600616e1b974e4fbcaa2667ee4 188 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 67 173 7.9E-18 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1233 233d13600616e1b974e4fbcaa2667ee4 188 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 13.184 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_3864 b78a6c9b893b9168bfe9e771423cd4c9 260 Gene3D G3DSA:3.60.10.10 1 258 1.1E-24 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_3864 b78a6c9b893b9168bfe9e771423cd4c9 260 SUPERFAMILY SSF56219 3 260 7.98E-23 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 415 40.571 T 13-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 Gene3D G3DSA:3.40.50.620 1 220 3.1E-82 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 Gene3D G3DSA:1.10.240.10 221 325 1.4E-30 T 13-10-2018 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 SUPERFAMILY SSF55174 328 414 2.16E-8 T 13-10-2018 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 1.3E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 1.3E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 1.3E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 1.3E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 SUPERFAMILY SSF52374 2 316 1.29E-97 T 13-10-2018 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 Pfam PF00579 tRNA synthetases class I (W and Y) 30 318 4.4E-81 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 1 415 2.3E-119 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3469 d5bf7170f6d0b76c7a02ece945f77731 416 Gene3D G3DSA:3.10.290.10 326 415 1.2E-12 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TREPR_0675 a3aa42526b2e297c0a514f51efa2f5fe 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 3.0E-25 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0675 a3aa42526b2e297c0a514f51efa2f5fe 325 SUPERFAMILY SSF52540 8 256 4.38E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0675 a3aa42526b2e297c0a514f51efa2f5fe 325 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0675 a3aa42526b2e297c0a514f51efa2f5fe 325 Pfam PF00005 ABC transporter 34 184 1.0E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0675 a3aa42526b2e297c0a514f51efa2f5fe 325 Gene3D G3DSA:3.40.50.300 5 325 1.2E-91 T 13-10-2018 TREPR_0675 a3aa42526b2e297c0a514f51efa2f5fe 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 3.9E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0675 a3aa42526b2e297c0a514f51efa2f5fe 325 SMART SM00382 42 234 5.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2302 7c1b91e005ec2218295c3264582a8bd5 450 SMART SM00421 392 449 3.7E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2302 7c1b91e005ec2218295c3264582a8bd5 450 Gene3D G3DSA:1.10.10.10 364 449 7.1E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2302 7c1b91e005ec2218295c3264582a8bd5 450 SUPERFAMILY SSF46894 388 447 7.82E-15 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_2302 7c1b91e005ec2218295c3264582a8bd5 450 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 409 425 5.4E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2302 7c1b91e005ec2218295c3264582a8bd5 450 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 395 409 5.4E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2302 7c1b91e005ec2218295c3264582a8bd5 450 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 425 437 5.4E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2302 7c1b91e005ec2218295c3264582a8bd5 450 Pfam PF00196 Bacterial regulatory proteins, luxR family 395 446 1.2E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_0473 967139b0219a879f16586c47a517192f 396 Pfam PF00557 Metallopeptidase family M24 157 377 2.7E-32 T 13-10-2018 IPR000994 Peptidase M24 TREPR_0473 967139b0219a879f16586c47a517192f 396 Gene3D G3DSA:3.90.230.10 149 391 1.1E-50 T 13-10-2018 TREPR_0473 967139b0219a879f16586c47a517192f 396 Pfam PF01321 Creatinase/Prolidase N-terminal domain 11 148 3.7E-17 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TREPR_0473 967139b0219a879f16586c47a517192f 396 SUPERFAMILY SSF55920 147 392 9.03E-48 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like TREPR_0473 967139b0219a879f16586c47a517192f 396 SUPERFAMILY SSF53092 9 147 7.32E-21 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_0473 967139b0219a879f16586c47a517192f 396 Gene3D G3DSA:3.40.350.10 10 147 4.7E-21 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_2430 65c98f92975e6cc82820557913a4bfc7 290 Gene3D G3DSA:1.10.3720.10 78 289 1.1E-15 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2430 65c98f92975e6cc82820557913a4bfc7 290 SUPERFAMILY SSF161098 83 268 2.75E-21 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2430 65c98f92975e6cc82820557913a4bfc7 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 286 1.8E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3325 e2e971a0045c75005bf0926c0dadfa15 272 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 262 1.8E-38 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TREPR_3325 e2e971a0045c75005bf0926c0dadfa15 272 SUPERFAMILY SSF51695 23 266 7.59E-69 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TREPR_3325 e2e971a0045c75005bf0926c0dadfa15 272 Gene3D G3DSA:3.20.20.190 16 270 5.9E-77 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TREPR_1237 521c8088730e1092f378fc582ba3f58c 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 12 82 4.0E-13 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1237 521c8088730e1092f378fc582ba3f58c 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 16.319 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1237 521c8088730e1092f378fc582ba3f58c 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 132 2.0E-9 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain TREPR_1237 521c8088730e1092f378fc582ba3f58c 141 SUPERFAMILY SSF51344 4 86 4.97E-17 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1237 521c8088730e1092f378fc582ba3f58c 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 2.1E-17 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1237 521c8088730e1092f378fc582ba3f58c 141 Gene3D G3DSA:2.60.15.10 3 90 3.3E-18 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1237 521c8088730e1092f378fc582ba3f58c 141 SUPERFAMILY SSF46604 88 134 8.11E-8 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1237 521c8088730e1092f378fc582ba3f58c 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 132 1.4E-27 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TREPR_1237 521c8088730e1092f378fc582ba3f58c 141 Gene3D G3DSA:1.20.5.440 91 134 1.2E-8 T 13-10-2018 TREPR_1439 3f33822c1e44983b92a5d39075a42c78 88 Gene3D G3DSA:3.30.2310.20 2 85 1.2E-35 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_1439 3f33822c1e44983b92a5d39075a42c78 88 SUPERFAMILY SSF143011 4 84 5.23E-25 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_1439 3f33822c1e44983b92a5d39075a42c78 88 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 6 85 1.1E-33 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TREPR_1439 3f33822c1e44983b92a5d39075a42c78 88 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 6 85 5.9E-28 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TREPR_0143 2861105f1c122dc82e096aa0ed783721 183 Pfam PF02441 Flavoprotein 2 175 4.5E-48 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 TREPR_0143 2861105f1c122dc82e096aa0ed783721 183 Gene3D G3DSA:3.40.50.1950 1 182 3.2E-61 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TREPR_0143 2861105f1c122dc82e096aa0ed783721 183 SUPERFAMILY SSF52507 2 177 2.35E-59 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TREPR_2204 dd028e77d612cbe1b524112028c97f8d 180 Gene3D G3DSA:3.40.1580.10 5 163 3.8E-9 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily TREPR_2204 dd028e77d612cbe1b524112028c97f8d 180 SUPERFAMILY SSF160631 5 161 1.44E-11 T 13-10-2018 TREPR_2811 433eec7176d1d8ee92ab3b33cc25c6d0 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 258 2.4E-94 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TREPR_2811 433eec7176d1d8ee92ab3b33cc25c6d0 260 Gene3D G3DSA:3.60.10.10 1 259 9.7E-88 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_2811 433eec7176d1d8ee92ab3b33cc25c6d0 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 257 6.9E-85 T 13-10-2018 TREPR_2811 433eec7176d1d8ee92ab3b33cc25c6d0 260 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 TREPR_2811 433eec7176d1d8ee92ab3b33cc25c6d0 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 250 8.8E-21 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TREPR_2811 433eec7176d1d8ee92ab3b33cc25c6d0 260 SUPERFAMILY SSF56219 1 259 9.16E-77 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_1861 8fa45918df77f8d48e45503af13a92eb 402 SUPERFAMILY SSF55874 269 387 6.45E-10 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1861 8fa45918df77f8d48e45503af13a92eb 402 Gene3D G3DSA:3.30.565.10 251 387 5.2E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2029 527f6540017798e6a8fb5d0028dca51c 982 Pfam PF02811 PHP domain 9 119 3.0E-12 T 13-10-2018 IPR004013 PHP domain GO:0003824 TREPR_2029 527f6540017798e6a8fb5d0028dca51c 982 Pfam PF14579 Helix-hairpin-helix motif 726 804 8.3E-18 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_2029 527f6540017798e6a8fb5d0028dca51c 982 Gene3D G3DSA:3.20.20.140 5 140 2.2E-20 T 13-10-2018 TREPR_2029 527f6540017798e6a8fb5d0028dca51c 982 SMART SM00481 9 70 3.2E-4 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TREPR_2029 527f6540017798e6a8fb5d0028dca51c 982 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 252 653 7.5E-99 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_2029 527f6540017798e6a8fb5d0028dca51c 982 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 149 942 1.0E-140 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TREPR_2029 527f6540017798e6a8fb5d0028dca51c 982 Gene3D G3DSA:3.20.20.140 144 229 1.8E-6 T 13-10-2018 TREPR_3169 bb7847d693156a635545d8d40ccc8c23 649 SUPERFAMILY SSF48452 533 644 1.33E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3169 bb7847d693156a635545d8d40ccc8c23 649 Gene3D G3DSA:1.25.40.10 527 649 4.9E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2725 295b1b2f5dac7a9477e09bbb4ca87a54 637 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 55 177 4.6E-18 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_2725 295b1b2f5dac7a9477e09bbb4ca87a54 637 SUPERFAMILY SSF53738 21 179 7.85E-22 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_2725 295b1b2f5dac7a9477e09bbb4ca87a54 637 SUPERFAMILY SSF55957 590 630 8.11E-6 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_2725 295b1b2f5dac7a9477e09bbb4ca87a54 637 Gene3D G3DSA:3.40.120.10 260 461 1.2E-10 T 13-10-2018 TREPR_2725 295b1b2f5dac7a9477e09bbb4ca87a54 637 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 379 461 2.3E-5 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TREPR_2725 295b1b2f5dac7a9477e09bbb4ca87a54 637 Gene3D G3DSA:3.40.120.10 344 447 1.2E-10 T 13-10-2018 TREPR_2725 295b1b2f5dac7a9477e09bbb4ca87a54 637 Gene3D G3DSA:3.40.120.10 26 194 1.2E-19 T 13-10-2018 TREPR_1132 1be1fa6267b6b1f0905a48f296620181 254 SUPERFAMILY SSF159713 8 247 2.62E-58 T 13-10-2018 TREPR_1132 1be1fa6267b6b1f0905a48f296620181 254 Pfam PF13938 Putative heavy-metal chelation 11 95 2.5E-20 T 13-10-2018 IPR025251 Domain of unknown function DUF4213 TREPR_1132 1be1fa6267b6b1f0905a48f296620181 254 Gene3D G3DSA:3.30.390.100 8 230 1.1E-79 T 13-10-2018 TREPR_1132 1be1fa6267b6b1f0905a48f296620181 254 Gene3D G3DSA:3.40.50.11590 113 223 1.1E-79 T 13-10-2018 TREPR_1132 1be1fa6267b6b1f0905a48f296620181 254 Pfam PF04016 Putative heavy-metal chelation 120 235 8.5E-29 T 13-10-2018 IPR007161 Putative heavy-metal chelation domain TREPR_3281 04c85ab7e39a29fd9cdb2857a7811719 288 Pfam PF13649 Methyltransferase domain 71 149 1.5E-9 T 13-10-2018 TREPR_3281 04c85ab7e39a29fd9cdb2857a7811719 288 Gene3D G3DSA:3.40.50.150 52 190 1.4E-15 T 13-10-2018 TREPR_3281 04c85ab7e39a29fd9cdb2857a7811719 288 SUPERFAMILY SSF53335 31 152 4.78E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_1221 23632d9bf3aa0ab4e9d05753f77e590c 369 Gene3D G3DSA:3.20.20.70 1 287 3.0E-80 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_1221 23632d9bf3aa0ab4e9d05753f77e590c 369 SMART SM00858 307 369 0.0011 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TREPR_1221 23632d9bf3aa0ab4e9d05753f77e590c 369 Pfam PF03102 NeuB family 38 265 3.5E-59 T 13-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 TREPR_1221 23632d9bf3aa0ab4e9d05753f77e590c 369 Pfam PF08666 SAF domain 308 364 6.3E-5 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TREPR_1221 23632d9bf3aa0ab4e9d05753f77e590c 369 SUPERFAMILY SSF51269 302 368 2.35E-8 T 13-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 TREPR_1221 23632d9bf3aa0ab4e9d05753f77e590c 369 SUPERFAMILY SSF51569 9 273 1.1E-61 T 13-10-2018 TREPR_1221 23632d9bf3aa0ab4e9d05753f77e590c 369 Gene3D G3DSA:3.90.1210.10 308 369 3.7E-13 T 13-10-2018 TREPR_2594 bee9bf15970b8a7cc30310ebc3e98fe3 710 SUPERFAMILY SSF52540 3 313 2.17E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2594 bee9bf15970b8a7cc30310ebc3e98fe3 710 Gene3D G3DSA:3.40.50.300 1 137 6.3E-22 T 13-10-2018 TREPR_2594 bee9bf15970b8a7cc30310ebc3e98fe3 710 Pfam PF13604 AAA domain 4 107 1.2E-11 T 13-10-2018 TREPR_2594 bee9bf15970b8a7cc30310ebc3e98fe3 710 Gene3D G3DSA:1.10.10.10 379 443 3.5E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2921 f01fda95fe3c12209c56f3bf86937b12 351 SUPERFAMILY SSF54106 302 348 8.11E-7 T 13-10-2018 TREPR_2921 f01fda95fe3c12209c56f3bf86937b12 351 Pfam PF00012 Hsp70 protein 4 121 2.8E-7 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TREPR_2921 f01fda95fe3c12209c56f3bf86937b12 351 Gene3D G3DSA:3.10.350.10 301 347 2.0E-11 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_2921 f01fda95fe3c12209c56f3bf86937b12 351 Pfam PF01476 LysM domain 302 348 1.0E-9 T 13-10-2018 IPR018392 LysM domain TREPR_2921 f01fda95fe3c12209c56f3bf86937b12 351 SUPERFAMILY SSF100920 3 98 6.02E-15 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TREPR_2921 f01fda95fe3c12209c56f3bf86937b12 351 SMART SM00257 301 348 1.7E-5 T 13-10-2018 IPR018392 LysM domain TREPR_2921 f01fda95fe3c12209c56f3bf86937b12 351 Gene3D G3DSA:2.60.34.10 1 122 3.0E-16 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TREPR_1657 538324edbad9c7710de75b486dfa0989 692 SMART SM00283 415 676 2.2E-18 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1657 538324edbad9c7710de75b486dfa0989 692 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 463 641 6.5E-21 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1657 538324edbad9c7710de75b486dfa0989 692 SUPERFAMILY SSF58104 368 683 2.22E-51 T 13-10-2018 TREPR_1657 538324edbad9c7710de75b486dfa0989 692 Gene3D G3DSA:1.10.287.950 347 677 3.4E-46 T 13-10-2018 TREPR_1657 538324edbad9c7710de75b486dfa0989 692 SMART SM00304 348 400 3.6E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_1348 c726601581c71ed0e78d3b2f0049a5dc 395 Pfam PF13568 Outer membrane protein beta-barrel domain 205 356 9.8E-7 T 13-10-2018 IPR025665 Outer membrane protein beta-barrel domain TREPR_2258 8b07cc16601051de50c8df40377aab5c 451 Pfam PF00589 Phage integrase family 237 422 5.4E-11 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TREPR_2258 8b07cc16601051de50c8df40377aab5c 451 SUPERFAMILY SSF56349 154 430 5.3E-42 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_2258 8b07cc16601051de50c8df40377aab5c 451 Gene3D G3DSA:1.10.443.10 234 431 1.6E-23 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_2258 8b07cc16601051de50c8df40377aab5c 451 Gene3D G3DSA:1.10.150.130 118 226 6.3E-13 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal TREPR_0506 bdbd571dd30df0c4f9dc72e1dca6d221 51 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.0E-24 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0506 bdbd571dd30df0c4f9dc72e1dca6d221 51 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-12 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0506 bdbd571dd30df0c4f9dc72e1dca6d221 51 Pfam PF00468 Ribosomal protein L34 1 43 5.0E-22 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0506 bdbd571dd30df0c4f9dc72e1dca6d221 51 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 13-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_0506 bdbd571dd30df0c4f9dc72e1dca6d221 51 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.522 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3095 cb6c54366a47bcd58eece21073468456 181 SUPERFAMILY SSF54862 7 168 7.53E-39 T 13-10-2018 TREPR_3095 cb6c54366a47bcd58eece21073468456 181 Pfam PF13247 4Fe-4S dicluster domain 59 153 4.2E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3095 cb6c54366a47bcd58eece21073468456 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3095 cb6c54366a47bcd58eece21073468456 181 Gene3D G3DSA:3.30.70.20 9 173 4.8E-32 T 13-10-2018 TREPR_3095 cb6c54366a47bcd58eece21073468456 181 Gene3D G3DSA:3.30.70.20 69 128 4.8E-32 T 13-10-2018 TREPR_0238 d7eea24c995174de4792895ec2ad9ed5 236 SUPERFAMILY SSF54913 136 233 1.87E-14 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TREPR_0238 d7eea24c995174de4792895ec2ad9ed5 236 Gene3D G3DSA:3.30.70.120 133 232 4.0E-13 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TREPR_0238 d7eea24c995174de4792895ec2ad9ed5 236 SUPERFAMILY SSF54913 13 103 1.02E-6 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 Pfam PF13534 4Fe-4S dicluster domain 303 368 3.2E-10 T 13-10-2018 TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 PRINTS PR00069 Aldo-keto reductase signature 107 125 8.8E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 PRINTS PR00069 Aldo-keto reductase signature 142 159 8.8E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 PRINTS PR00069 Aldo-keto reductase signature 48 72 8.8E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 Gene3D G3DSA:1.10.1060.10 293 380 2.3E-7 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 SUPERFAMILY SSF51430 1 291 7.6E-59 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 Gene3D G3DSA:3.20.20.100 1 288 1.1E-60 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 354 365 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 Pfam PF00248 Aldo/keto reductase family 34 216 7.9E-32 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain TREPR_3365 a9466f1de0b1bf4656db8b697da74400 386 SUPERFAMILY SSF46548 272 371 7.5E-11 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_3270 25c41a74a9345d634cc882afb37b9513 532 SUPERFAMILY SSF53850 31 529 1.99E-86 T 13-10-2018 TREPR_3270 25c41a74a9345d634cc882afb37b9513 532 Gene3D G3DSA:3.10.105.10 257 504 3.7E-146 T 13-10-2018 TREPR_3270 25c41a74a9345d634cc882afb37b9513 532 PIRSF PIRSF002741 1 511 2.0E-63 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_3270 25c41a74a9345d634cc882afb37b9513 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 409 8.8E-66 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_3270 25c41a74a9345d634cc882afb37b9513 532 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 105 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site TREPR_3270 25c41a74a9345d634cc882afb37b9513 532 Gene3D G3DSA:3.40.190.10 50 516 3.7E-146 T 13-10-2018 TREPR_2279 3722b6a33e87fe21c2b28d82e0a89cd1 950 Gene3D G3DSA:3.40.50.300 305 575 1.9E-9 T 13-10-2018 TREPR_2279 3722b6a33e87fe21c2b28d82e0a89cd1 950 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 819 889 6.6E-9 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_2279 3722b6a33e87fe21c2b28d82e0a89cd1 950 Pfam PF13476 AAA domain 318 549 5.0E-7 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain TREPR_2279 3722b6a33e87fe21c2b28d82e0a89cd1 950 SUPERFAMILY SSF52540 315 904 2.52E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0274 507cce053c420a89a5ad988be938968d 369 ProSitePatterns PS00617 RecF protein signature 1. 115 135 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TREPR_0274 507cce053c420a89a5ad988be938968d 369 ProSitePatterns PS00618 RecF protein signature 2. 307 325 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TREPR_0274 507cce053c420a89a5ad988be938968d 369 Pfam PF02463 RecF/RecN/SMC N terminal domain 5 329 4.7E-12 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TREPR_0274 507cce053c420a89a5ad988be938968d 369 SUPERFAMILY SSF52540 1 339 6.89E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0274 507cce053c420a89a5ad988be938968d 369 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 369 64.869 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TREPR_0274 507cce053c420a89a5ad988be938968d 369 Gene3D G3DSA:3.40.50.300 7 338 2.2E-80 T 13-10-2018 TREPR_0274 507cce053c420a89a5ad988be938968d 369 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 339 1.7E-68 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TREPR_0274 507cce053c420a89a5ad988be938968d 369 Gene3D G3DSA:1.20.1050.90 118 306 2.2E-80 T 13-10-2018 TREPR_0808 c3a5f7099a965ec081c5ae691203f22a 391 SMART SM00382 122 284 1.2E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0808 c3a5f7099a965ec081c5ae691203f22a 391 Gene3D G3DSA:3.40.50.300 110 293 2.7E-33 T 13-10-2018 TREPR_0808 c3a5f7099a965ec081c5ae691203f22a 391 Pfam PF07728 AAA domain (dynein-related subfamily) 126 278 1.9E-21 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TREPR_0808 c3a5f7099a965ec081c5ae691203f22a 391 SUPERFAMILY SSF52540 118 298 4.6E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2434 06cf713c7b23749d9fc1e96732e9adc2 551 PIRSF PIRSF001492 11 551 1.8E-170 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_2434 06cf713c7b23749d9fc1e96732e9adc2 551 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 17 544 1.7E-122 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_2434 06cf713c7b23749d9fc1e96732e9adc2 551 Gene3D G3DSA:3.40.1450.10 90 329 5.7E-181 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_2434 06cf713c7b23749d9fc1e96732e9adc2 551 Gene3D G3DSA:3.40.720.10 17 541 5.7E-181 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TREPR_2434 06cf713c7b23749d9fc1e96732e9adc2 551 SUPERFAMILY SSF64158 90 322 1.57E-64 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_2434 06cf713c7b23749d9fc1e96732e9adc2 551 Pfam PF01676 Metalloenzyme superfamily 17 538 1.3E-64 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 TREPR_2434 06cf713c7b23749d9fc1e96732e9adc2 551 SUPERFAMILY SSF53649 17 545 3.01E-52 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TREPR_2434 06cf713c7b23749d9fc1e96732e9adc2 551 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 96 313 3.0E-63 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TREPR_3890 800fc12bf86650ea277ffc7b0e4d8e55 416 SUPERFAMILY SSF53098 184 301 8.6E-21 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_3890 800fc12bf86650ea277ffc7b0e4d8e55 416 Pfam PF00665 Integrase core domain 185 289 1.2E-11 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TREPR_3890 800fc12bf86650ea277ffc7b0e4d8e55 416 Gene3D G3DSA:3.30.420.10 183 321 5.4E-12 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_3490 35a6d65f1e35b89c63edefb6d1481fbf 569 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 307 504 2.9E-15 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 TREPR_3490 35a6d65f1e35b89c63edefb6d1481fbf 569 PRINTS PR00988 Uridine kinase signature 302 319 2.4E-7 T 13-10-2018 TREPR_3490 35a6d65f1e35b89c63edefb6d1481fbf 569 PRINTS PR00988 Uridine kinase signature 379 394 2.4E-7 T 13-10-2018 TREPR_3490 35a6d65f1e35b89c63edefb6d1481fbf 569 PRINTS PR00988 Uridine kinase signature 334 345 2.4E-7 T 13-10-2018 TREPR_3490 35a6d65f1e35b89c63edefb6d1481fbf 569 SUPERFAMILY SSF55186 80 229 1.53E-25 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TREPR_3490 35a6d65f1e35b89c63edefb6d1481fbf 569 Gene3D G3DSA:3.40.50.300 246 515 3.1E-50 T 13-10-2018 TREPR_3490 35a6d65f1e35b89c63edefb6d1481fbf 569 SMART SM00382 301 464 2.1E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3490 35a6d65f1e35b89c63edefb6d1481fbf 569 Gene3D G3DSA:3.30.980.10 82 226 5.8E-19 T 13-10-2018 TREPR_3490 35a6d65f1e35b89c63edefb6d1481fbf 569 SUPERFAMILY SSF52540 303 499 1.04E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1733 cf2aa2381a7b562b6ec074f79cf325fc 170 SUPERFAMILY SSF109854 4 153 1.01E-17 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TREPR_1733 cf2aa2381a7b562b6ec074f79cf325fc 170 Pfam PF05163 DinB family 1 156 2.7E-13 T 13-10-2018 IPR007837 DNA damage-inducible protein DinB TREPR_1733 cf2aa2381a7b562b6ec074f79cf325fc 170 Gene3D G3DSA:1.20.120.450 1 165 2.9E-20 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TREPR_3090 be5965392d291349cb3aa88d79640aa3 384 Gene3D G3DSA:1.20.1270.370 24 225 1.6E-39 T 13-10-2018 TREPR_3090 be5965392d291349cb3aa88d79640aa3 384 Gene3D G3DSA:3.40.50.11900 242 384 1.7E-40 T 13-10-2018 TREPR_3090 be5965392d291349cb3aa88d79640aa3 384 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 40 384 1.9E-81 T 13-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit TREPR_3090 be5965392d291349cb3aa88d79640aa3 384 Gene3D G3DSA:3.40.50.11890 33 159 1.6E-39 T 13-10-2018 TREPR_3740 089543960f2324ab0751aa76592a3828 355 SUPERFAMILY SSF53448 5 250 3.99E-14 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3740 089543960f2324ab0751aa76592a3828 355 Gene3D G3DSA:3.90.550.10 4 242 4.9E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3740 089543960f2324ab0751aa76592a3828 355 SUPERFAMILY SSF56784 241 321 2.75E-7 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_3740 089543960f2324ab0751aa76592a3828 355 Gene3D G3DSA:3.40.50.1000 243 341 9.7E-13 T 13-10-2018 IPR023214 HAD superfamily TREPR_0409 6b7656adc5e25bf77f4bc479231cde95 170 Pfam PF02810 SEC-C motif 143 160 4.2E-11 T 13-10-2018 IPR004027 SEC-C motif TREPR_0409 6b7656adc5e25bf77f4bc479231cde95 170 Pfam PF02810 SEC-C motif 3 18 5.2E-6 T 13-10-2018 IPR004027 SEC-C motif TREPR_0409 6b7656adc5e25bf77f4bc479231cde95 170 Gene3D G3DSA:3.10.450.50 1 162 6.8E-54 T 13-10-2018 TREPR_0409 6b7656adc5e25bf77f4bc479231cde95 170 SUPERFAMILY SSF54427 24 129 2.28E-30 T 13-10-2018 IPR032710 NTF2-like domain superfamily TREPR_0409 6b7656adc5e25bf77f4bc479231cde95 170 SUPERFAMILY SSF103642 141 161 3.76E-9 T 13-10-2018 TREPR_3530 987dc9ea9c5d038a8fdf96c0773760e0 651 SUPERFAMILY SSF56300 49 399 6.04E-55 T 13-10-2018 TREPR_3530 987dc9ea9c5d038a8fdf96c0773760e0 651 SUPERFAMILY SSF55816 421 584 1.7E-18 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3530 987dc9ea9c5d038a8fdf96c0773760e0 651 Gene3D G3DSA:3.90.780.10 406 597 1.1E-22 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3530 987dc9ea9c5d038a8fdf96c0773760e0 651 Pfam PF00149 Calcineurin-like phosphoesterase 55 327 1.4E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_3530 987dc9ea9c5d038a8fdf96c0773760e0 651 Pfam PF02872 5'-nucleotidase, C-terminal domain 423 570 1.9E-13 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3530 987dc9ea9c5d038a8fdf96c0773760e0 651 PRINTS PR01607 Apyrase family signature 279 296 3.5E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3530 987dc9ea9c5d038a8fdf96c0773760e0 651 PRINTS PR01607 Apyrase family signature 468 491 3.5E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3530 987dc9ea9c5d038a8fdf96c0773760e0 651 PRINTS PR01607 Apyrase family signature 51 69 3.5E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_3530 987dc9ea9c5d038a8fdf96c0773760e0 651 PRINTS PR01607 Apyrase family signature 309 332 3.5E-11 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2535 c938ba4b73000ab640ce5ef6fa760758 252 SUPERFAMILY SSF53448 5 225 3.71E-56 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2535 c938ba4b73000ab640ce5ef6fa760758 252 Gene3D G3DSA:3.90.550.10 2 237 5.2E-62 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2535 c938ba4b73000ab640ce5ef6fa760758 252 Pfam PF00535 Glycosyl transferase family 2 7 132 9.4E-37 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_0604 d06dee2f1414fc1dfa9ebd09b1a9e641 408 SUPERFAMILY SSF56219 40 405 2.09E-34 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_0604 d06dee2f1414fc1dfa9ebd09b1a9e641 408 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 46 280 3.0E-9 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TREPR_3065 413ca2f98550c575fa39e7e93011f4d1 443 Pfam PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit 65 437 1.3E-73 T 13-10-2018 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel TREPR_3065 413ca2f98550c575fa39e7e93011f4d1 443 Gene3D G3DSA:3.20.20.20 1 313 9.1E-88 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_3065 413ca2f98550c575fa39e7e93011f4d1 443 Pfam PF04060 Putative Fe-S cluster 12 43 7.9E-14 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 TREPR_3065 413ca2f98550c575fa39e7e93011f4d1 443 Gene3D G3DSA:3.40.50.11600 314 442 1.1E-37 T 13-10-2018 TREPR_3382 d3273ffb7fe9798749c789367ca43780 189 Pfam PF02417 Chromate transporter 6 169 2.2E-45 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TREPR_3040 18d9c69f6f7f96de484f8143663b47af 273 SMART SM00909 168 259 1.2E-21 T 13-10-2018 IPR019606 GerMN domain TREPR_3040 18d9c69f6f7f96de484f8143663b47af 273 Pfam PF10646 Sporulation and spore germination 141 255 2.1E-19 T 13-10-2018 IPR019606 GerMN domain TREPR_1013 4ed15118829b9a92bb294b0940cccd37 254 SUPERFAMILY SSF52218 3 120 3.67E-11 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_1013 4ed15118829b9a92bb294b0940cccd37 254 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 186 197 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1013 4ed15118829b9a92bb294b0940cccd37 254 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 214 225 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1013 4ed15118829b9a92bb294b0940cccd37 254 SUPERFAMILY SSF54862 184 239 2.8E-15 T 13-10-2018 TREPR_1013 4ed15118829b9a92bb294b0940cccd37 254 Pfam PF00037 4Fe-4S binding domain 185 202 9.3E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_1013 4ed15118829b9a92bb294b0940cccd37 254 Gene3D G3DSA:3.30.70.20 180 238 2.3E-11 T 13-10-2018 TREPR_1013 4ed15118829b9a92bb294b0940cccd37 254 Gene3D G3DSA:3.40.50.360 2 156 7.9E-8 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_0559 317f0f20037e880d1a11db310e64fe5e 353 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 79 144 2.3E-17 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_0559 317f0f20037e880d1a11db310e64fe5e 353 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 108 147 6.7E-8 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_0559 317f0f20037e880d1a11db310e64fe5e 353 Gene3D G3DSA:3.10.20.660 77 148 3.3E-16 T 13-10-2018 TREPR_1334 a26c58fe3c649267e7391e0206bf9295 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 266 3.0E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1334 a26c58fe3c649267e7391e0206bf9295 276 Gene3D G3DSA:1.10.3720.10 64 269 1.2E-10 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1334 a26c58fe3c649267e7391e0206bf9295 276 SUPERFAMILY SSF161098 71 254 3.27E-15 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0987 3e51ee1cce6151d7b3c1287deeee43be 580 Gene3D G3DSA:3.40.50.12780 19 315 4.9E-52 T 13-10-2018 TREPR_0987 3e51ee1cce6151d7b3c1287deeee43be 580 SUPERFAMILY SSF56801 13 574 1.44E-113 T 13-10-2018 TREPR_0987 3e51ee1cce6151d7b3c1287deeee43be 580 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 13-10-2018 IPR020845 AMP-binding, conserved site TREPR_0987 3e51ee1cce6151d7b3c1287deeee43be 580 Gene3D G3DSA:3.30.300.30 460 577 4.9E-10 T 13-10-2018 TREPR_0987 3e51ee1cce6151d7b3c1287deeee43be 580 Gene3D G3DSA:3.40.50.12780 318 459 1.5E-37 T 13-10-2018 TREPR_0987 3e51ee1cce6151d7b3c1287deeee43be 580 Pfam PF00501 AMP-binding enzyme 28 464 1.9E-88 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TREPR_3554 0a2128b5db8149e208cd0a5e1809344b 256 Pfam PF03880 DbpA RNA binding domain 120 190 1.4E-19 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain TREPR_3554 0a2128b5db8149e208cd0a5e1809344b 256 Gene3D G3DSA:3.30.70.330 119 194 1.1E-17 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TREPR_1362 4cf1924e4d4ad65e68df47266a59a4aa 451 Gene3D G3DSA:3.40.50.1100 82 190 1.8E-39 T 13-10-2018 TREPR_1362 4cf1924e4d4ad65e68df47266a59a4aa 451 Gene3D G3DSA:3.40.50.1100 44 347 1.8E-39 T 13-10-2018 TREPR_1362 4cf1924e4d4ad65e68df47266a59a4aa 451 SUPERFAMILY SSF53686 32 348 3.93E-51 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TREPR_1362 4cf1924e4d4ad65e68df47266a59a4aa 451 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 43 345 9.9E-50 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TREPR_2421 c46d152eba17488c5f6d5f5e58b58ee8 210 ProDom PD155205 TRANSMEMBRANE MEMBRANE TP0733 TP0126 55 209 4.0E-13 T 13-10-2018 TREPR_1852 7674b7a111ce18e3f26b422fb208e090 439 SMART SM00220 25 308 8.2E-5 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 TREPR_1852 7674b7a111ce18e3f26b422fb208e090 439 Pfam PF00069 Protein kinase domain 27 231 1.5E-13 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 TREPR_1852 7674b7a111ce18e3f26b422fb208e090 439 Gene3D G3DSA:1.10.510.10 18 261 5.8E-16 T 13-10-2018 TREPR_1852 7674b7a111ce18e3f26b422fb208e090 439 SUPERFAMILY SSF56112 26 233 6.74E-23 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily TREPR_0283 34a06349b58ae9d7ce80e5b5335b8e64 342 Gene3D G3DSA:3.40.190.10 46 276 6.3E-42 T 13-10-2018 TREPR_0283 34a06349b58ae9d7ce80e5b5335b8e64 342 SUPERFAMILY SSF53850 39 288 7.44E-41 T 13-10-2018 TREPR_0283 34a06349b58ae9d7ce80e5b5335b8e64 342 Pfam PF13343 Bacterial extracellular solute-binding protein 131 283 2.0E-17 T 13-10-2018 TREPR_0283 34a06349b58ae9d7ce80e5b5335b8e64 342 Gene3D G3DSA:3.40.190.10 143 261 6.3E-42 T 13-10-2018 TREPR_3892 ad7cf5a0a96be067a481893a7e7bb65b 412 Pfam PF00665 Integrase core domain 193 301 9.0E-9 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TREPR_3892 ad7cf5a0a96be067a481893a7e7bb65b 412 SUPERFAMILY SSF53098 193 326 3.92E-15 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_3892 ad7cf5a0a96be067a481893a7e7bb65b 412 Gene3D G3DSA:3.30.420.10 193 328 9.5E-10 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_1542 2755b75f1dc06fae5bec987b20e7a524 191 SUPERFAMILY SSF47240 4 147 5.88E-40 T 13-10-2018 IPR009078 Ferritin-like superfamily TREPR_1542 2755b75f1dc06fae5bec987b20e7a524 191 Gene3D G3DSA:2.20.28.10 147 191 3.0E-21 T 13-10-2018 TREPR_1542 2755b75f1dc06fae5bec987b20e7a524 191 Gene3D G3DSA:1.20.1260.10 1 146 9.4E-59 T 13-10-2018 IPR012347 Ferritin-like TREPR_1542 2755b75f1dc06fae5bec987b20e7a524 191 SUPERFAMILY SSF57802 148 190 9.79E-13 T 13-10-2018 TREPR_1542 2755b75f1dc06fae5bec987b20e7a524 191 Pfam PF02915 Rubrerythrin 11 138 2.8E-31 T 13-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 TREPR_2026 88396820333d0139598c3efd0f8bc23d 207 Gene3D G3DSA:2.10.109.10 85 207 2.1E-15 T 13-10-2018 TREPR_2026 88396820333d0139598c3efd0f8bc23d 207 Pfam PF00717 Peptidase S24-like 120 188 7.6E-5 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TREPR_2026 88396820333d0139598c3efd0f8bc23d 207 SUPERFAMILY SSF47413 10 69 1.01E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_2026 88396820333d0139598c3efd0f8bc23d 207 SUPERFAMILY SSF51306 81 205 5.76E-19 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TREPR_2026 88396820333d0139598c3efd0f8bc23d 207 Gene3D G3DSA:1.10.260.40 5 84 2.1E-6 T 13-10-2018 TREPR_1716 fdcb9c44f3a3e3651e2e3b9f939e4bb3 545 SMART SM00567 E-Z type HEAT repeats 398 427 25.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TREPR_1716 fdcb9c44f3a3e3651e2e3b9f939e4bb3 545 SMART SM00567 E-Z type HEAT repeats 335 364 25.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TREPR_1716 fdcb9c44f3a3e3651e2e3b9f939e4bb3 545 SMART SM00567 E-Z type HEAT repeats 125 150 350.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TREPR_1716 fdcb9c44f3a3e3651e2e3b9f939e4bb3 545 SMART SM00567 E-Z type HEAT repeats 304 333 120.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TREPR_1716 fdcb9c44f3a3e3651e2e3b9f939e4bb3 545 SMART SM00567 E-Z type HEAT repeats 271 300 150.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TREPR_1716 fdcb9c44f3a3e3651e2e3b9f939e4bb3 545 Gene3D G3DSA:1.25.10.10 236 463 8.4E-23 T 13-10-2018 IPR011989 Armadillo-like helical TREPR_1716 fdcb9c44f3a3e3651e2e3b9f939e4bb3 545 SUPERFAMILY SSF48371 259 462 7.97E-25 T 13-10-2018 IPR016024 Armadillo-type fold TREPR_1716 fdcb9c44f3a3e3651e2e3b9f939e4bb3 545 Pfam PF03130 PBS lyase HEAT-like repeat 401 421 0.11 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 TREPR_1716 fdcb9c44f3a3e3651e2e3b9f939e4bb3 545 Pfam PF13646 HEAT repeats 300 376 1.4E-10 T 13-10-2018 TREPR_2003 0190e5979d9e99c0aa029ab8d20cd547 441 SUPERFAMILY SSF53850 16 439 1.47E-38 T 13-10-2018 TREPR_2003 0190e5979d9e99c0aa029ab8d20cd547 441 Gene3D G3DSA:3.40.190.10 151 429 4.1E-52 T 13-10-2018 TREPR_2003 0190e5979d9e99c0aa029ab8d20cd547 441 Pfam PF01547 Bacterial extracellular solute-binding protein 42 356 2.8E-19 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_2003 0190e5979d9e99c0aa029ab8d20cd547 441 Gene3D G3DSA:3.40.190.10 44 399 4.1E-52 T 13-10-2018 TREPR_3217 a31c3fb79028d02f47d2e76c03967ac5 237 Gene3D G3DSA:3.40.50.7700 104 235 3.6E-31 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TREPR_3217 a31c3fb79028d02f47d2e76c03967ac5 237 Pfam PF00731 AIR carboxylase 105 229 1.3E-14 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TREPR_3217 a31c3fb79028d02f47d2e76c03967ac5 237 SUPERFAMILY SSF52255 103 231 2.88E-26 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TREPR_3217 a31c3fb79028d02f47d2e76c03967ac5 237 SMART SM01001 103 235 8.1E-32 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TREPR_3155 cfc32e611a822b672d7fb83e612d0ec0 168 SUPERFAMILY SSF50447 4 87 9.89E-14 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_3155 cfc32e611a822b672d7fb83e612d0ec0 168 Pfam PF05239 PRC-barrel domain 94 161 9.6E-11 T 13-10-2018 IPR027275 PRC-barrel domain TREPR_3155 cfc32e611a822b672d7fb83e612d0ec0 168 SUPERFAMILY SSF50346 97 159 2.2E-12 T 13-10-2018 IPR011033 PRC-barrel-like superfamily TREPR_3155 cfc32e611a822b672d7fb83e612d0ec0 168 Gene3D G3DSA:2.40.30.60 5 89 2.3E-15 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 TREPR_3155 cfc32e611a822b672d7fb83e612d0ec0 168 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 160 3.5E-35 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TREPR_3155 cfc32e611a822b672d7fb83e612d0ec0 168 Pfam PF01782 RimM N-terminal domain 9 87 6.4E-16 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 TREPR_3155 cfc32e611a822b672d7fb83e612d0ec0 168 Gene3D G3DSA:2.30.30.240 92 164 1.0E-10 T 13-10-2018 TREPR_3155 cfc32e611a822b672d7fb83e612d0ec0 168 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 167 18.786 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TREPR_2209 5d46ee6bf687b4c1338f77a9dcfbc026 630 Gene3D G3DSA:3.30.450.330 209 546 7.7E-87 T 13-10-2018 TREPR_2209 5d46ee6bf687b4c1338f77a9dcfbc026 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 57 174 3.0E-13 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TREPR_2209 5d46ee6bf687b4c1338f77a9dcfbc026 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 230 538 5.5E-52 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TREPR_2209 5d46ee6bf687b4c1338f77a9dcfbc026 630 Gene3D G3DSA:3.40.710.10 265 462 7.7E-87 T 13-10-2018 TREPR_2209 5d46ee6bf687b4c1338f77a9dcfbc026 630 SUPERFAMILY SSF56519 56 189 3.79E-25 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TREPR_2209 5d46ee6bf687b4c1338f77a9dcfbc026 630 Gene3D G3DSA:3.90.1310.30 55 208 1.5E-26 T 13-10-2018 TREPR_2209 5d46ee6bf687b4c1338f77a9dcfbc026 630 SUPERFAMILY SSF56601 204 551 6.64E-75 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TREPR_2209 5d46ee6bf687b4c1338f77a9dcfbc026 630 SUPERFAMILY SSF54184 576 629 1.57E-8 T 13-10-2018 TREPR_0085 bdf2c3c5174e26249866af515cb43331 355 SUPERFAMILY SSF50331 239 353 2.14E-13 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_0085 bdf2c3c5174e26249866af515cb43331 355 Gene3D G3DSA:2.40.50.140 240 280 3.1E-5 T 13-10-2018 TREPR_0085 bdf2c3c5174e26249866af515cb43331 355 Pfam PF00005 ABC transporter 20 162 2.6E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0085 bdf2c3c5174e26249866af515cb43331 355 Gene3D G3DSA:3.40.50.300 2 239 1.6E-74 T 13-10-2018 TREPR_0085 bdf2c3c5174e26249866af515cb43331 355 Gene3D G3DSA:2.40.50.100 281 331 3.1E-5 T 13-10-2018 TREPR_0085 bdf2c3c5174e26249866af515cb43331 355 SMART SM00382 29 212 6.4E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0085 bdf2c3c5174e26249866af515cb43331 355 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0085 bdf2c3c5174e26249866af515cb43331 355 Pfam PF08402 TOBE domain 278 353 1.4E-8 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TREPR_0085 bdf2c3c5174e26249866af515cb43331 355 SUPERFAMILY SSF52540 5 244 3.41E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0719 cfcd4b6e1ed2d79a99f9bdcb6439b3b7 270 SUPERFAMILY SSF102215 15 267 5.36E-41 T 13-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TREPR_0719 cfcd4b6e1ed2d79a99f9bdcb6439b3b7 270 Gene3D G3DSA:3.40.50.10310 13 269 5.0E-48 T 13-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TREPR_0719 cfcd4b6e1ed2d79a99f9bdcb6439b3b7 270 Pfam PF02633 Creatinine amidohydrolase 17 264 1.6E-54 T 13-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TREPR_0457 aa72c0edb1caffe0fa43a959cdbb9928 89 SUPERFAMILY SSF47413 27 86 1.29E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0457 aa72c0edb1caffe0fa43a959cdbb9928 89 Gene3D G3DSA:1.10.260.40 21 86 5.0E-6 T 13-10-2018 TREPR_2694 96432608025488ac026854bfce1f9499 410 Pfam PF04015 Domain of unknown function (DUF362) 100 349 2.1E-17 T 13-10-2018 IPR007160 Domain of unknown function DUF362 TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 164 219 3.9E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 SMART SM00421 162 219 2.4E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 SMART SM00448 2 115 1.4E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 SUPERFAMILY SSF52172 1 128 2.13E-25 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 SUPERFAMILY SSF46894 156 224 6.12E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 Pfam PF00072 Response regulator receiver domain 4 115 2.6E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 Gene3D G3DSA:3.40.50.12740 2 224 2.4E-48 T 13-10-2018 TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 179 6.4E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 207 6.4E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_0451 f09f2c2d03d168a47ca1a1481a24565e 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 195 6.4E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_0688 797be65476b37bdf9c5943fa69e2519d 112 Gene3D G3DSA:3.30.750.24 6 111 6.9E-26 T 13-10-2018 IPR036513 STAS domain superfamily TREPR_0688 797be65476b37bdf9c5943fa69e2519d 112 Pfam PF01740 STAS domain 4 106 2.3E-18 T 13-10-2018 IPR002645 STAS domain TREPR_0688 797be65476b37bdf9c5943fa69e2519d 112 SUPERFAMILY SSF52091 1 108 3.34E-26 T 13-10-2018 IPR036513 STAS domain superfamily TREPR_0688 797be65476b37bdf9c5943fa69e2519d 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 1.6E-27 T 13-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TREPR_1141 c703f1a9af6642860414c4d51dabaab0 290 SMART SM00382 41 232 1.1E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1141 c703f1a9af6642860414c4d51dabaab0 290 Gene3D G3DSA:3.40.50.300 20 249 3.7E-23 T 13-10-2018 TREPR_1141 c703f1a9af6642860414c4d51dabaab0 290 Pfam PF00005 ABC transporter 34 187 9.2E-13 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1141 c703f1a9af6642860414c4d51dabaab0 290 SUPERFAMILY SSF52540 31 233 2.62E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0379 9924bd364c04054a8b74eb37906976e5 392 TIGRFAM TIGR00261 traB: TraB family protein 13 386 9.6E-104 T 13-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal TREPR_0379 9924bd364c04054a8b74eb37906976e5 392 Pfam PF01963 TraB family 11 230 5.0E-31 T 13-10-2018 IPR002816 Pheromone shutdown, TraB TREPR_1467 344f28874ca828307c887b23379e7cb7 301 Gene3D G3DSA:1.10.3720.10 19 291 1.6E-50 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1467 344f28874ca828307c887b23379e7cb7 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 291 3.5E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1467 344f28874ca828307c887b23379e7cb7 301 SUPERFAMILY SSF161098 21 288 2.71E-52 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2400 2f83d4ce93c894291a297dfaa31e7dc0 408 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 186 330 1.6E-9 T 13-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 TREPR_2400 2f83d4ce93c894291a297dfaa31e7dc0 408 Gene3D G3DSA:3.40.50.12580 221 373 2.5E-9 T 13-10-2018 TREPR_0440 97ad7564365f788eeb3aaf23db125b61 241 SUPERFAMILY SSF52540 2 238 4.9E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0440 97ad7564365f788eeb3aaf23db125b61 241 Pfam PF00005 ABC transporter 17 167 1.7E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0440 97ad7564365f788eeb3aaf23db125b61 241 Gene3D G3DSA:3.40.50.300 1 239 5.6E-59 T 13-10-2018 TREPR_0440 97ad7564365f788eeb3aaf23db125b61 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 216 238 9.7E-10 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TREPR_0440 97ad7564365f788eeb3aaf23db125b61 241 SMART SM00382 26 224 1.7E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0194 2664cac3b96eb114b2a3ee286083ed1d 255 Pfam PF00535 Glycosyl transferase family 2 4 140 7.1E-23 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_0194 2664cac3b96eb114b2a3ee286083ed1d 255 Gene3D G3DSA:3.90.550.10 1 230 8.2E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0194 2664cac3b96eb114b2a3ee286083ed1d 255 SUPERFAMILY SSF53448 2 204 1.36E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1762 0f6633c7ce5ffbae038d383a92d9712a 149 Pfam PF00692 dUTPase 18 148 1.6E-32 T 13-10-2018 IPR029054 dUTPase-like TREPR_1762 0f6633c7ce5ffbae038d383a92d9712a 149 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 4 149 33.116 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TREPR_1762 0f6633c7ce5ffbae038d383a92d9712a 149 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 148 8.6E-54 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TREPR_1762 0f6633c7ce5ffbae038d383a92d9712a 149 SUPERFAMILY SSF51283 4 149 3.27E-51 T 13-10-2018 IPR036157 dUTPase-like superfamily TREPR_1762 0f6633c7ce5ffbae038d383a92d9712a 149 Gene3D G3DSA:2.70.40.10 1 148 2.0E-53 T 13-10-2018 IPR036157 dUTPase-like superfamily TREPR_2991 7c11a9fc0a971ef91b8ea57ed164a664 221 SUPERFAMILY SSF51569 7 214 4.58E-55 T 13-10-2018 TREPR_2991 7c11a9fc0a971ef91b8ea57ed164a664 221 Pfam PF01081 KDPG and KHG aldolase 17 205 1.0E-51 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TREPR_2991 7c11a9fc0a971ef91b8ea57ed164a664 221 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 12 212 2.4E-60 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TREPR_2991 7c11a9fc0a971ef91b8ea57ed164a664 221 Gene3D G3DSA:3.20.20.70 2 216 1.1E-65 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2991 7c11a9fc0a971ef91b8ea57ed164a664 221 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 129 142 - T 13-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TREPR_1636 54e7663d7094d73ca5397575cd27f542 302 Gene3D G3DSA:3.10.450.620 23 152 3.0E-6 T 13-10-2018 TREPR_1636 54e7663d7094d73ca5397575cd27f542 302 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 36 262 1.9E-30 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system TREPR_0640 55442b749b6bebc91aaff98b17671017 394 PIRSF PIRSF001456 271 394 1.7E-31 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_0640 55442b749b6bebc91aaff98b17671017 394 PIRSF PIRSF001456 3 272 1.0E-100 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_0640 55442b749b6bebc91aaff98b17671017 394 Hamap MF_00300 Chorismate synthase [aroC]. 10 394 35.301 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_0640 55442b749b6bebc91aaff98b17671017 394 SUPERFAMILY SSF103263 4 391 8.76E-127 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_0640 55442b749b6bebc91aaff98b17671017 394 ProSitePatterns PS00789 Chorismate synthase signature 3. 361 377 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_0640 55442b749b6bebc91aaff98b17671017 394 Pfam PF01264 Chorismate synthase 10 387 3.3E-130 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_0640 55442b749b6bebc91aaff98b17671017 394 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_0640 55442b749b6bebc91aaff98b17671017 394 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_0640 55442b749b6bebc91aaff98b17671017 394 TIGRFAM TIGR00033 aroC: chorismate synthase 10 266 2.8E-94 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_0640 55442b749b6bebc91aaff98b17671017 394 Gene3D G3DSA:3.60.150.10 1 394 2.5E-138 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TREPR_1001 d37cf2591944d677b68533b3424c0398 714 Gene3D G3DSA:3.10.310.30 466 582 2.2E-20 T 13-10-2018 TREPR_1001 d37cf2591944d677b68533b3424c0398 714 Pfam PF01368 DHH family 78 203 1.1E-11 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_1001 d37cf2591944d677b68533b3424c0398 714 Gene3D G3DSA:3.90.1640.30 332 458 1.1E-25 T 13-10-2018 TREPR_1001 d37cf2591944d677b68533b3424c0398 714 Gene3D G3DSA:3.90.1640.30 52 233 9.3E-51 T 13-10-2018 TREPR_1001 d37cf2591944d677b68533b3424c0398 714 SUPERFAMILY SSF64182 52 210 9.55E-46 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily TREPR_1001 d37cf2591944d677b68533b3424c0398 714 SUPERFAMILY SSF64182 358 580 4.01E-43 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily TREPR_1001 d37cf2591944d677b68533b3424c0398 714 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 25 707 1.1E-162 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 TREPR_1001 d37cf2591944d677b68533b3424c0398 714 Pfam PF02272 DHHA1 domain 456 574 1.0E-14 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TREPR_1665 3d92795a28f9f1b944a538e270b9e830 429 Pfam PF13387 Domain of unknown function (DUF4105) 32 172 1.2E-24 T 13-10-2018 IPR025178 Domain of unknown function DUF4105 TREPR_3676 eb643a209ceee53cf419aa526672351d 183 Gene3D G3DSA:3.40.50.850 2 183 3.1E-46 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TREPR_3676 eb643a209ceee53cf419aa526672351d 183 Pfam PF00857 Isochorismatase family 4 176 6.7E-36 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 TREPR_3676 eb643a209ceee53cf419aa526672351d 183 SUPERFAMILY SSF52499 3 182 6.28E-47 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TREPR_3352 676032d34601e69a07878bd8fd3258bf 338 Pfam PF08308 PEGA domain 30 91 3.8E-7 T 13-10-2018 IPR013229 PEGA TREPR_3837 1707bb06bf2e819870c80f063d0bbcde 477 Gene3D G3DSA:3.40.640.10 77 329 1.1E-54 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3837 1707bb06bf2e819870c80f063d0bbcde 477 Gene3D G3DSA:3.90.1150.10 330 457 5.3E-39 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3837 1707bb06bf2e819870c80f063d0bbcde 477 SUPERFAMILY SSF53383 28 471 1.04E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3760 ccc1548d18dbe03d586eb905350970df 276 Pfam PF02361 Cobalt transport protein 13 233 1.3E-30 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component TREPR_1739 8c44dc8cbbb64861b8cdf3d9ed665137 586 SUPERFAMILY SSF48452 472 572 3.79E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1739 8c44dc8cbbb64861b8cdf3d9ed665137 586 Gene3D G3DSA:1.25.40.10 467 578 9.3E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1739 8c44dc8cbbb64861b8cdf3d9ed665137 586 PRINTS PR01217 Proline rich extensin signature 50 66 2.2E-10 T 13-10-2018 TREPR_1739 8c44dc8cbbb64861b8cdf3d9ed665137 586 PRINTS PR01217 Proline rich extensin signature 124 141 2.2E-10 T 13-10-2018 TREPR_1739 8c44dc8cbbb64861b8cdf3d9ed665137 586 PRINTS PR01217 Proline rich extensin signature 83 104 2.2E-10 T 13-10-2018 TREPR_1739 8c44dc8cbbb64861b8cdf3d9ed665137 586 PRINTS PR01217 Proline rich extensin signature 142 167 2.2E-10 T 13-10-2018 TREPR_1739 8c44dc8cbbb64861b8cdf3d9ed665137 586 PRINTS PR01217 Proline rich extensin signature 71 83 2.2E-10 T 13-10-2018 TREPR_1291 dc318d07da724942d55590370c3944ed 1090 SMART SM00487 237 432 9.2E-8 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TREPR_1291 dc318d07da724942d55590370c3944ed 1090 Gene3D G3DSA:3.40.50.10810 239 505 2.1E-20 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily TREPR_1291 dc318d07da724942d55590370c3944ed 1090 Gene3D G3DSA:3.40.50.300 670 916 4.0E-30 T 13-10-2018 TREPR_1291 dc318d07da724942d55590370c3944ed 1090 SUPERFAMILY SSF52540 676 924 4.7E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1291 dc318d07da724942d55590370c3944ed 1090 Pfam PF00176 SNF2 family N-terminal domain 251 431 9.2E-11 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 TREPR_1291 dc318d07da724942d55590370c3944ed 1090 Pfam PF00271 Helicase conserved C-terminal domain 701 834 4.6E-14 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1291 dc318d07da724942d55590370c3944ed 1090 SMART SM00490 723 834 6.6E-11 T 13-10-2018 IPR001650 Helicase, C-terminal TREPR_1291 dc318d07da724942d55590370c3944ed 1090 SUPERFAMILY SSF52540 209 424 1.65E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0247 d68dcbf963c653bcfaa29608733822aa 440 Gene3D G3DSA:3.40.50.1980 25 159 2.2E-36 T 13-10-2018 TREPR_0247 d68dcbf963c653bcfaa29608733822aa 440 SUPERFAMILY SSF53807 24 400 2.14E-73 T 13-10-2018 TREPR_0247 d68dcbf963c653bcfaa29608733822aa 440 Gene3D G3DSA:3.40.50.1980 285 425 6.7E-14 T 13-10-2018 TREPR_0247 d68dcbf963c653bcfaa29608733822aa 440 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 40 47 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 TREPR_0247 d68dcbf963c653bcfaa29608733822aa 440 Gene3D G3DSA:3.40.50.1980 160 263 4.8E-11 T 13-10-2018 TREPR_0247 d68dcbf963c653bcfaa29608733822aa 440 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 27 401 5.6E-56 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_1943 b98b2ebf103a2778372ab751f05c96d4 151 SUPERFAMILY SSF89623 2 143 1.15E-54 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TREPR_1943 b98b2ebf103a2778372ab751f05c96d4 151 PIRSF PIRSF005384 1 146 1.1E-55 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TREPR_1943 b98b2ebf103a2778372ab751f05c96d4 151 Pfam PF02502 Ribose/Galactose Isomerase 2 139 6.2E-53 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TREPR_1943 b98b2ebf103a2778372ab751f05c96d4 151 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 3.4E-53 T 13-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 TREPR_1943 b98b2ebf103a2778372ab751f05c96d4 151 Gene3D G3DSA:3.40.1400.10 1 146 3.3E-57 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TREPR_1943 b98b2ebf103a2778372ab751f05c96d4 151 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 2 144 7.0E-55 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 TREPR_3540 28a5524c0780087914b79eff3e341d73 465 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 54 423 1.4E-17 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_3540 28a5524c0780087914b79eff3e341d73 465 Gene3D G3DSA:3.40.50.1980 187 291 8.8E-9 T 13-10-2018 TREPR_3540 28a5524c0780087914b79eff3e341d73 465 Gene3D G3DSA:3.40.50.1980 38 171 3.1E-14 T 13-10-2018 TREPR_3540 28a5524c0780087914b79eff3e341d73 465 SUPERFAMILY SSF53807 51 447 7.2E-27 T 13-10-2018 TREPR_3712 bb0f2cd7dcef049969ced6e44474d3f4 406 Pfam PF00557 Metallopeptidase family M24 151 387 5.0E-28 T 13-10-2018 IPR000994 Peptidase M24 TREPR_3712 bb0f2cd7dcef049969ced6e44474d3f4 406 SUPERFAMILY SSF53092 32 142 3.84E-21 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_3712 bb0f2cd7dcef049969ced6e44474d3f4 406 Gene3D G3DSA:3.40.350.10 17 140 3.2E-12 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_3712 bb0f2cd7dcef049969ced6e44474d3f4 406 Gene3D G3DSA:3.90.230.10 142 403 6.3E-37 T 13-10-2018 TREPR_3712 bb0f2cd7dcef049969ced6e44474d3f4 406 SUPERFAMILY SSF55920 139 402 5.63E-38 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like TREPR_3712 bb0f2cd7dcef049969ced6e44474d3f4 406 Pfam PF01321 Creatinase/Prolidase N-terminal domain 19 142 6.5E-12 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TREPR_0342 1f1d7eb50ce638f9273adcb664d55658 367 Gene3D G3DSA:3.40.50.2000 14 167 7.5E-45 T 13-10-2018 TREPR_0342 1f1d7eb50ce638f9273adcb664d55658 367 Gene3D G3DSA:3.40.50.2000 168 298 7.5E-45 T 13-10-2018 TREPR_0342 1f1d7eb50ce638f9273adcb664d55658 367 Pfam PF00534 Glycosyl transferases group 1 181 298 5.4E-23 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_0342 1f1d7eb50ce638f9273adcb664d55658 367 SUPERFAMILY SSF53756 3 299 2.29E-50 T 13-10-2018 TREPR_3547 6db590d105f07e623f47654e398dd4f5 299 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 43 249 6.4E-17 T 13-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal TREPR_3547 6db590d105f07e623f47654e398dd4f5 299 Gene3D G3DSA:3.40.950.20 66 257 1.4E-7 T 13-10-2018 TREPR_3547 6db590d105f07e623f47654e398dd4f5 299 SUPERFAMILY SSF53920 28 256 2.22E-22 T 13-10-2018 IPR009016 Iron hydrogenase TREPR_3614 9cea890980b419002b582b1ba8bae6c8 372 Gene3D G3DSA:2.40.420.20 111 362 2.1E-72 T 13-10-2018 TREPR_3614 9cea890980b419002b582b1ba8bae6c8 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 178 362 9.7E-41 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TREPR_3614 9cea890980b419002b582b1ba8bae6c8 372 Gene3D G3DSA:2.40.50.100 137 208 2.1E-72 T 13-10-2018 TREPR_3614 9cea890980b419002b582b1ba8bae6c8 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 170 283 3.2E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TREPR_3614 9cea890980b419002b582b1ba8bae6c8 372 SUPERFAMILY SSF111369 124 287 1.06E-11 T 13-10-2018 TREPR_3614 9cea890980b419002b582b1ba8bae6c8 372 Gene3D G3DSA:2.40.30.170 119 294 2.1E-72 T 13-10-2018 TREPR_1005 40ebf558c469a9eb1ddac59789648a3f 483 Pfam PF13556 PucR C-terminal helix-turn-helix domain 420 468 2.1E-16 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain TREPR_1005 40ebf558c469a9eb1ddac59789648a3f 483 Gene3D G3DSA:1.10.10.2840 354 480 5.0E-16 T 13-10-2018 TREPR_0337 29d8b4725d44cf5e12089ea234e6e4f1 366 PIRSF PIRSF000390 6 366 6.6E-90 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TREPR_0337 29d8b4725d44cf5e12089ea234e6e4f1 366 Gene3D G3DSA:3.90.1150.10 250 366 3.6E-35 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_0337 29d8b4725d44cf5e12089ea234e6e4f1 366 Gene3D G3DSA:3.40.640.10 1 248 5.2E-75 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0337 29d8b4725d44cf5e12089ea234e6e4f1 366 SUPERFAMILY SSF53383 15 365 3.34E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_0337 29d8b4725d44cf5e12089ea234e6e4f1 366 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 363 2.8E-106 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TREPR_3786 def2d28558f8c6fb8aa8c0d27c35542e 490 SUPERFAMILY SSF56235 28 279 1.2E-65 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_3786 def2d28558f8c6fb8aa8c0d27c35542e 490 SUPERFAMILY SSF53271 273 485 6.69E-65 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_3786 def2d28558f8c6fb8aa8c0d27c35542e 490 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 28 480 9.4E-153 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TREPR_3786 def2d28558f8c6fb8aa8c0d27c35542e 490 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 27 479 45.721 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TREPR_3786 def2d28558f8c6fb8aa8c0d27c35542e 490 Gene3D G3DSA:3.60.20.10 28 481 2.4E-150 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TREPR_3786 def2d28558f8c6fb8aa8c0d27c35542e 490 Gene3D G3DSA:3.40.50.2020 297 461 2.4E-150 T 13-10-2018 TREPR_3786 def2d28558f8c6fb8aa8c0d27c35542e 490 Pfam PF00156 Phosphoribosyl transferase domain 310 408 4.4E-8 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TREPR_3786 def2d28558f8c6fb8aa8c0d27c35542e 490 Pfam PF13537 Glutamine amidotransferase domain 111 235 1.8E-17 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TREPR_3786 def2d28558f8c6fb8aa8c0d27c35542e 490 PIRSF PIRSF000485 24 490 3.8E-171 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TREPR_1244 78e2a4f505d56534155b69acd646e531 103 Gene3D G3DSA:3.30.460.10 4 103 1.8E-11 T 13-10-2018 TREPR_1244 78e2a4f505d56534155b69acd646e531 103 SUPERFAMILY SSF81301 2 63 4.28E-11 T 13-10-2018 TREPR_1244 78e2a4f505d56534155b69acd646e531 103 Pfam PF01909 Nucleotidyltransferase domain 9 96 1.1E-7 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TREPR_2489 efd5be1c26fec9d5a72b087227881c9e 522 Gene3D G3DSA:3.90.1580.10 444 513 1.8E-9 T 13-10-2018 TREPR_2489 efd5be1c26fec9d5a72b087227881c9e 522 SUPERFAMILY SSF56436 305 511 2.59E-32 T 13-10-2018 IPR016187 C-type lectin fold TREPR_2489 efd5be1c26fec9d5a72b087227881c9e 522 Pfam PF03781 Sulfatase-modifying factor enzyme 1 309 439 2.9E-12 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TREPR_2489 efd5be1c26fec9d5a72b087227881c9e 522 Gene3D G3DSA:3.90.1580.10 298 443 3.5E-16 T 13-10-2018 TREPR_2489 efd5be1c26fec9d5a72b087227881c9e 522 Pfam PF08308 PEGA domain 71 113 1.8E-9 T 13-10-2018 IPR013229 PEGA TREPR_0972 9123c58861656d42fc50f6094b26bfbd 437 Pfam PF07456 Heptaprenyl diphosphate synthase component I 19 163 1.0E-31 T 13-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I TREPR_1455 2a711fadd3ef4d9410b5f75a4592482d 138 Pfam PF04205 FMN-binding domain 42 134 3.3E-7 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TREPR_1455 2a711fadd3ef4d9410b5f75a4592482d 138 Gene3D G3DSA:3.90.1010.20 24 138 3.5E-15 T 13-10-2018 TREPR_1455 2a711fadd3ef4d9410b5f75a4592482d 138 SMART SM00900 40 136 0.0019 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 Pfam PF02875 Mur ligase family, glutamate ligase domain 342 412 4.5E-7 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 Gene3D G3DSA:3.40.1190.10 107 338 2.5E-39 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 Gene3D G3DSA:3.90.190.20 345 477 4.0E-37 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 16 477 1.0E-110 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 Pfam PF08245 Mur ligase middle domain 121 319 6.9E-19 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 Gene3D G3DSA:3.40.50.720 10 106 3.1E-21 T 13-10-2018 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 SUPERFAMILY SSF51984 11 106 5.36E-12 T 13-10-2018 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 14 480 26.173 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 SUPERFAMILY SSF53244 340 479 1.14E-31 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_1066 96fc1a5379f1ced582eacc3c59d049ef 481 SUPERFAMILY SSF53623 107 338 1.18E-31 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_1490 631c5989ced12364eeb2332ac00a9956 61 Gene3D G3DSA:4.10.830.10 1 61 4.8E-27 T 13-10-2018 TREPR_1490 631c5989ced12364eeb2332ac00a9956 61 SUPERFAMILY SSF57716 5 61 1.71E-20 T 13-10-2018 TREPR_1490 631c5989ced12364eeb2332ac00a9956 61 Pfam PF00253 Ribosomal protein S14p/S29e 12 60 6.3E-24 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1490 631c5989ced12364eeb2332ac00a9956 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 24.276 T 13-10-2018 IPR023053 Ribosomal protein S14, type Z TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 8.3E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 8.3E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 8.3E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 8.3E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 464 1.3E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 SMART SM00304 188 241 4.7E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 SMART SM00387 351 467 9.9E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 Gene3D G3DSA:3.30.565.10 308 466 5.9E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 SMART SM00388 242 306 9.1E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 304 6.7E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 Gene3D G3DSA:1.10.287.130 192 307 9.4E-24 T 13-10-2018 TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 SUPERFAMILY SSF55874 296 463 5.77E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 SUPERFAMILY SSF158472 190 238 2.62E-6 T 13-10-2018 TREPR_0581 f18856c2273a474aeb4461dd7404aa26 468 SUPERFAMILY SSF47384 225 307 1.96E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TREPR_2015 34f6e82d19674a98d0deaa5e6aedc8c0 240 SMART SM00421 150 207 5.0E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2015 34f6e82d19674a98d0deaa5e6aedc8c0 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2015 34f6e82d19674a98d0deaa5e6aedc8c0 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2015 34f6e82d19674a98d0deaa5e6aedc8c0 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.1E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2015 34f6e82d19674a98d0deaa5e6aedc8c0 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.1E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2015 34f6e82d19674a98d0deaa5e6aedc8c0 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.1E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_2015 34f6e82d19674a98d0deaa5e6aedc8c0 240 Gene3D G3DSA:3.40.50.12740 4 213 9.5E-19 T 13-10-2018 TREPR_2015 34f6e82d19674a98d0deaa5e6aedc8c0 240 SUPERFAMILY SSF46894 149 214 2.21E-14 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 3 573 16.156 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 Pfam PF14849 YidC periplasmic domain 81 331 1.6E-15 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 373 571 2.7E-63 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 Gene3D G3DSA:2.70.98.90 77 335 2.7E-8 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 Pfam PF02096 60Kd inner membrane protein 374 571 2.5E-60 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 2 370 1.9E-25 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 PRINTS PR00701 60kDa inner membrane protein signature 87 108 1.2E-12 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 PRINTS PR00701 60kDa inner membrane protein signature 259 274 1.2E-12 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 PRINTS PR00701 60kDa inner membrane protein signature 435 458 1.2E-12 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TREPR_0503 13de131d05e3d7df3dcb91c3c35f1506 600 PRINTS PR00701 60kDa inner membrane protein signature 1 19 1.2E-12 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TREPR_2951 e1367e3bbe2aadefd6eb761c580e7481 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.4E-11 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2951 e1367e3bbe2aadefd6eb761c580e7481 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.4E-11 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2951 e1367e3bbe2aadefd6eb761c580e7481 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.4E-11 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2951 e1367e3bbe2aadefd6eb761c580e7481 85 SUPERFAMILY SSF55594 3 83 1.16E-20 T 13-10-2018 IPR035895 HPr-like superfamily TREPR_2951 e1367e3bbe2aadefd6eb761c580e7481 85 Gene3D G3DSA:3.30.1340.10 1 85 3.5E-25 T 13-10-2018 IPR035895 HPr-like superfamily TREPR_2951 e1367e3bbe2aadefd6eb761c580e7481 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.3E-24 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2951 e1367e3bbe2aadefd6eb761c580e7481 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.7E-22 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2728 4b30ca9c81fbdbd8a544a394dde57c80 243 Pfam PF02629 CoA binding domain 109 204 1.2E-22 T 13-10-2018 IPR003781 CoA-binding GO:0048037 TREPR_2728 4b30ca9c81fbdbd8a544a394dde57c80 243 SUPERFAMILY SSF46785 35 105 1.9E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2728 4b30ca9c81fbdbd8a544a394dde57c80 243 SMART SM00881 105 206 3.4E-16 T 13-10-2018 IPR003781 CoA-binding GO:0048037 TREPR_2728 4b30ca9c81fbdbd8a544a394dde57c80 243 Gene3D G3DSA:3.40.50.720 105 240 1.9E-43 T 13-10-2018 TREPR_2728 4b30ca9c81fbdbd8a544a394dde57c80 243 Pfam PF06971 Putative DNA-binding protein N-terminus 30 78 9.2E-16 T 13-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 TREPR_2728 4b30ca9c81fbdbd8a544a394dde57c80 243 SUPERFAMILY SSF51735 109 231 7.74E-25 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2728 4b30ca9c81fbdbd8a544a394dde57c80 243 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 27 235 29.557 T 13-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 TREPR_2728 4b30ca9c81fbdbd8a544a394dde57c80 243 Gene3D G3DSA:1.10.10.10 26 104 4.5E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1114 68d78b580d8a7d65d8cb4a000f6b5e4a 185 ProDom PD022619 AF0103 MM1100 MJ0504 UNCHARACTERIZED SIMILAR MA4416 7 184 8.0E-36 T 13-10-2018 IPR015074 Protein of unknown function DUF1867 TREPR_1114 68d78b580d8a7d65d8cb4a000f6b5e4a 185 PIRSF PIRSF016138 1 185 2.4E-66 T 13-10-2018 IPR015074 Protein of unknown function DUF1867 TREPR_1114 68d78b580d8a7d65d8cb4a000f6b5e4a 185 SUPERFAMILY SSF52935 1 185 6.41E-60 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_1114 68d78b580d8a7d65d8cb4a000f6b5e4a 185 Gene3D G3DSA:3.40.1380.20 1 185 1.4E-65 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_1114 68d78b580d8a7d65d8cb4a000f6b5e4a 185 Pfam PF02887 Pyruvate kinase, alpha/beta domain 15 161 1.4E-13 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_1375 c5521dc41b62de285ce61ea435e15116 299 Gene3D G3DSA:1.10.3720.10 86 298 3.0E-23 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1375 c5521dc41b62de285ce61ea435e15116 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 69 3.6E-13 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_1375 c5521dc41b62de285ce61ea435e15116 299 SUPERFAMILY SSF161098 92 279 4.71E-28 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1375 c5521dc41b62de285ce61ea435e15116 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 298 3.3E-32 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0810 4413ba01157b43c66947461273a4e399 139 Pfam PF08279 HTH domain 17 58 1.2E-6 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 TREPR_0810 4413ba01157b43c66947461273a4e399 139 SUPERFAMILY SSF46785 15 63 2.57E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0810 4413ba01157b43c66947461273a4e399 139 Gene3D G3DSA:1.10.10.10 9 76 5.7E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1855 6d193636dc62fa4a750900635027d7fd 377 Pfam PF03781 Sulfatase-modifying factor enzyme 1 180 314 3.4E-15 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TREPR_1855 6d193636dc62fa4a750900635027d7fd 377 Gene3D G3DSA:3.90.1580.10 180 360 4.6E-29 T 13-10-2018 TREPR_1855 6d193636dc62fa4a750900635027d7fd 377 SUPERFAMILY SSF56436 181 332 1.84E-22 T 13-10-2018 IPR016187 C-type lectin fold TREPR_1714 f71776affdabb6daa5882ffacd6d2e8a 206 SUPERFAMILY SSF48498 107 184 5.13E-8 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TREPR_1714 f71776affdabb6daa5882ffacd6d2e8a 206 SUPERFAMILY SSF46689 5 65 1.45E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_1714 f71776affdabb6daa5882ffacd6d2e8a 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 1.6E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1714 f71776affdabb6daa5882ffacd6d2e8a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.1E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1714 f71776affdabb6daa5882ffacd6d2e8a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.1E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1714 f71776affdabb6daa5882ffacd6d2e8a 206 Gene3D G3DSA:1.10.357.10 3 188 3.9E-28 T 13-10-2018 TREPR_2552 1aab38f1f418801a7e68861c15e9ea9b 250 SUPERFAMILY SSF161098 49 231 2.62E-23 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2552 1aab38f1f418801a7e68861c15e9ea9b 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 240 9.4E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2552 1aab38f1f418801a7e68861c15e9ea9b 250 Gene3D G3DSA:1.10.3720.10 48 241 6.1E-20 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0444 9bddfe5f4dd714047a87ef443bdfe627 404 SUPERFAMILY SSF53822 40 387 6.06E-53 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0444 9bddfe5f4dd714047a87ef443bdfe627 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 36 52 2.6E-7 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TREPR_0444 9bddfe5f4dd714047a87ef443bdfe627 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 58 74 2.6E-7 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TREPR_0444 9bddfe5f4dd714047a87ef443bdfe627 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 264 282 2.6E-7 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TREPR_0444 9bddfe5f4dd714047a87ef443bdfe627 404 Pfam PF13458 Periplasmic binding protein 37 341 1.8E-44 T 13-10-2018 IPR028081 Leucine-binding protein domain TREPR_0444 9bddfe5f4dd714047a87ef443bdfe627 404 Gene3D G3DSA:3.40.50.2300 152 282 3.3E-48 T 13-10-2018 TREPR_0444 9bddfe5f4dd714047a87ef443bdfe627 404 Gene3D G3DSA:3.40.50.2300 41 340 3.3E-48 T 13-10-2018 TREPR_3260 49975fc2b730d955336e922dba0d0560 359 Pfam PF00092 von Willebrand factor type A domain 99 250 9.3E-7 T 13-10-2018 IPR002035 von Willebrand factor, type A TREPR_3260 49975fc2b730d955336e922dba0d0560 359 SUPERFAMILY SSF53300 95 298 1.1E-16 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_3260 49975fc2b730d955336e922dba0d0560 359 Gene3D G3DSA:3.40.50.410 93 305 1.2E-33 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_1136 4b5fd44532833bf364bf29f709d6d954 691 SUPERFAMILY SSF110296 403 596 1.46E-8 T 13-10-2018 TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 575 601 490.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 936 961 3300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 793 818 170.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 545 570 1200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 638 664 660.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 889 909 8900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 389 415 860.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 357 384 790.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 695 726 1200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 448 479 650.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 484 510 3800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 825 851 200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 515 541 2000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 852 883 3500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 606 632 3900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 758 788 1600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SMART SM00710 421 447 600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SUPERFAMILY SSF51126 750 963 5.13E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_1346 7b7728f0d503f20bba26d24931abaf4a 1071 SUPERFAMILY SSF51126 298 594 5.38E-10 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_3747 cd8e0efa3ff9a7482fc56e27b959efed 277 Pfam PF00535 Glycosyl transferase family 2 23 131 8.7E-21 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_3747 cd8e0efa3ff9a7482fc56e27b959efed 277 SUPERFAMILY SSF53448 20 213 1.59E-38 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3747 cd8e0efa3ff9a7482fc56e27b959efed 277 Gene3D G3DSA:3.90.550.10 6 245 1.2E-41 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1548 b17f4f1b20c33bf118436f7cb7699087 291 Gene3D G3DSA:3.40.50.11270 12 99 1.3E-80 T 13-10-2018 TREPR_1548 b17f4f1b20c33bf118436f7cb7699087 291 Pfam PF02401 LytB protein 3 284 1.3E-76 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TREPR_1548 b17f4f1b20c33bf118436f7cb7699087 291 Gene3D G3DSA:3.40.1010.20 100 202 1.3E-80 T 13-10-2018 TREPR_1548 b17f4f1b20c33bf118436f7cb7699087 291 Gene3D G3DSA:3.40.1010.20 5 281 1.3E-80 T 13-10-2018 TREPR_1548 b17f4f1b20c33bf118436f7cb7699087 291 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 4.2E-73 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TREPR_1548 b17f4f1b20c33bf118436f7cb7699087 291 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 29.726 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TREPR_3578 45ba90779040d61eb2039fb5501c0f8a 409 Pfam PF12683 Protein of unknown function (DUF3798) 35 310 9.3E-126 T 13-10-2018 IPR024258 Protein of unknown function DUF3798 TREPR_3578 45ba90779040d61eb2039fb5501c0f8a 409 Gene3D G3DSA:3.40.50.11400 35 150 5.0E-73 T 13-10-2018 TREPR_3578 45ba90779040d61eb2039fb5501c0f8a 409 Gene3D G3DSA:3.40.50.11390 151 308 5.0E-73 T 13-10-2018 TREPR_3578 45ba90779040d61eb2039fb5501c0f8a 409 SUPERFAMILY SSF53822 100 259 1.27E-7 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1517 9a5165989bcabd6d884beb592026fd54 515 Pfam PF13174 Tetratricopeptide repeat 459 494 4.4E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1517 9a5165989bcabd6d884beb592026fd54 515 Gene3D G3DSA:1.25.40.10 408 514 4.5E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2470 92a507815d985821e378384cd82e5411 304 SMART SM00257 75 119 3.6E-12 T 13-10-2018 IPR018392 LysM domain TREPR_2470 92a507815d985821e378384cd82e5411 304 SMART SM00257 12 56 3.8E-13 T 13-10-2018 IPR018392 LysM domain TREPR_2470 92a507815d985821e378384cd82e5411 304 SUPERFAMILY SSF54106 74 119 3.27E-9 T 13-10-2018 TREPR_2470 92a507815d985821e378384cd82e5411 304 Gene3D G3DSA:3.10.350.10 2 63 7.5E-15 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_2470 92a507815d985821e378384cd82e5411 304 Gene3D G3DSA:3.10.350.10 64 123 1.7E-13 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_2470 92a507815d985821e378384cd82e5411 304 Pfam PF01551 Peptidase family M23 206 298 1.4E-16 T 13-10-2018 IPR016047 Peptidase M23 TREPR_2470 92a507815d985821e378384cd82e5411 304 SUPERFAMILY SSF54106 11 56 1.83E-10 T 13-10-2018 TREPR_2470 92a507815d985821e378384cd82e5411 304 Pfam PF01476 LysM domain 76 119 7.7E-11 T 13-10-2018 IPR018392 LysM domain TREPR_2470 92a507815d985821e378384cd82e5411 304 Pfam PF01476 LysM domain 13 56 3.1E-13 T 13-10-2018 IPR018392 LysM domain TREPR_2470 92a507815d985821e378384cd82e5411 304 SUPERFAMILY SSF51261 191 299 5.23E-22 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_2470 92a507815d985821e378384cd82e5411 304 Gene3D G3DSA:2.70.70.10 161 303 2.3E-19 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_1142 c51ed62e9a043f0d91a06d43a50ded52 350 Pfam PF13343 Bacterial extracellular solute-binding protein 83 313 1.5E-43 T 13-10-2018 TREPR_1142 c51ed62e9a043f0d91a06d43a50ded52 350 SUPERFAMILY SSF53850 108 330 3.59E-14 T 13-10-2018 TREPR_1142 c51ed62e9a043f0d91a06d43a50ded52 350 Gene3D G3DSA:3.40.190.10 138 248 3.0E-7 T 13-10-2018 TREPR_1142 c51ed62e9a043f0d91a06d43a50ded52 350 Gene3D G3DSA:3.40.190.10 123 289 3.0E-7 T 13-10-2018 TREPR_0480 f4ee318878ab32e732c9157310938c10 494 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 416 6.3E-87 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_0480 f4ee318878ab32e732c9157310938c10 494 Gene3D G3DSA:3.10.105.10 266 474 3.4E-129 T 13-10-2018 TREPR_0480 f4ee318878ab32e732c9157310938c10 494 Gene3D G3DSA:3.90.76.10 56 165 3.4E-129 T 13-10-2018 TREPR_0480 f4ee318878ab32e732c9157310938c10 494 PIRSF PIRSF002741 1 492 5.6E-109 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_0480 f4ee318878ab32e732c9157310938c10 494 SUPERFAMILY SSF53850 20 493 1.47E-126 T 13-10-2018 TREPR_0480 f4ee318878ab32e732c9157310938c10 494 Gene3D G3DSA:3.40.190.10 32 475 3.4E-129 T 13-10-2018 TREPR_0860 d460f2c1b63f00ca8faf12bc2c5b33cc 337 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 312 6.1E-45 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TREPR_0860 d460f2c1b63f00ca8faf12bc2c5b33cc 337 Gene3D G3DSA:3.40.190.170 21 334 4.6E-65 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TREPR_2514 f32b225e92cd002b32f110b29dde1865 524 Pfam PF05262 Borrelia P83/100 protein 37 494 1.2E-107 T 13-10-2018 IPR007926 Borrelia P83100 TREPR_0902 6411da8a126eb4811c0f72006d38e07b 267 Gene3D G3DSA:3.20.20.410 1 260 3.8E-88 T 13-10-2018 IPR036520 UPF0759 superfamily TREPR_0902 6411da8a126eb4811c0f72006d38e07b 267 SUPERFAMILY SSF117396 3 258 1.31E-71 T 13-10-2018 IPR036520 UPF0759 superfamily TREPR_0902 6411da8a126eb4811c0f72006d38e07b 267 Pfam PF01904 Protein of unknown function DUF72 21 255 1.3E-59 T 13-10-2018 IPR002763 Protein of unknown function DUF72 TREPR_2967 3cefc9ef7ad2fa7f45dcc0d98e4ae981 85 Gene3D G3DSA:3.30.1340.10 1 83 7.4E-26 T 13-10-2018 IPR035895 HPr-like superfamily TREPR_2967 3cefc9ef7ad2fa7f45dcc0d98e4ae981 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.6E-22 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2967 3cefc9ef7ad2fa7f45dcc0d98e4ae981 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.0E-11 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2967 3cefc9ef7ad2fa7f45dcc0d98e4ae981 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.0E-11 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2967 3cefc9ef7ad2fa7f45dcc0d98e4ae981 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.0E-11 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2967 3cefc9ef7ad2fa7f45dcc0d98e4ae981 85 SUPERFAMILY SSF55594 1 84 8.5E-21 T 13-10-2018 IPR035895 HPr-like superfamily TREPR_2967 3cefc9ef7ad2fa7f45dcc0d98e4ae981 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.9E-23 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like TREPR_2618 b574f56e878fd546bd9fb91d5de94bbe 365 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 79 119 1.8E-6 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_2618 b574f56e878fd546bd9fb91d5de94bbe 365 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 157 196 1.6E-10 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_2618 b574f56e878fd546bd9fb91d5de94bbe 365 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 233 271 1.6E-6 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_2618 b574f56e878fd546bd9fb91d5de94bbe 365 Gene3D G3DSA:3.10.20.660 42 119 7.4E-11 T 13-10-2018 TREPR_2618 b574f56e878fd546bd9fb91d5de94bbe 365 Gene3D G3DSA:3.10.20.660 198 272 6.4E-13 T 13-10-2018 TREPR_2618 b574f56e878fd546bd9fb91d5de94bbe 365 Gene3D G3DSA:3.10.20.660 122 197 1.6E-15 T 13-10-2018 TREPR_2618 b574f56e878fd546bd9fb91d5de94bbe 365 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 199 269 5.3E-14 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_2618 b574f56e878fd546bd9fb91d5de94bbe 365 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 45 115 2.1E-12 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_2618 b574f56e878fd546bd9fb91d5de94bbe 365 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 124 193 1.5E-16 T 13-10-2018 IPR013378 Listeria/Bacterioides repeat TREPR_1216 0649d7590e5a8733322fab9f1ed487d0 161 SUPERFAMILY SSF52402 6 151 9.77E-23 T 13-10-2018 TREPR_1216 0649d7590e5a8733322fab9f1ed487d0 161 Gene3D G3DSA:3.40.50.620 5 151 7.0E-22 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1216 0649d7590e5a8733322fab9f1ed487d0 161 Pfam PF00582 Universal stress protein family 8 150 4.3E-17 T 13-10-2018 IPR006016 UspA TREPR_1216 0649d7590e5a8733322fab9f1ed487d0 161 PRINTS PR01438 Universal stress protein signature 110 122 3.4E-6 T 13-10-2018 IPR006015 Universal stress protein A TREPR_1216 0649d7590e5a8733322fab9f1ed487d0 161 PRINTS PR01438 Universal stress protein signature 6 24 3.4E-6 T 13-10-2018 IPR006015 Universal stress protein A TREPR_1216 0649d7590e5a8733322fab9f1ed487d0 161 PRINTS PR01438 Universal stress protein signature 128 150 3.4E-6 T 13-10-2018 IPR006015 Universal stress protein A TREPR_1265 73daa7e1e2457d21f14092d00b6662ae 276 Pfam PF01012 Electron transfer flavoprotein domain 27 193 1.3E-40 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TREPR_1265 73daa7e1e2457d21f14092d00b6662ae 276 SMART SM00893 26 215 1.0E-46 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 TREPR_1265 73daa7e1e2457d21f14092d00b6662ae 276 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 164 184 - T 13-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 TREPR_1265 73daa7e1e2457d21f14092d00b6662ae 276 SUPERFAMILY SSF52402 3 257 1.53E-57 T 13-10-2018 TREPR_1265 73daa7e1e2457d21f14092d00b6662ae 276 Gene3D G3DSA:3.40.50.620 3 275 7.2E-78 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1265 73daa7e1e2457d21f14092d00b6662ae 276 PIRSF PIRSF000090 3 275 6.4E-72 T 13-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 TREPR_2863 ff5e0eb88bb59df4d31e71dc9296bf20 476 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 457 7.4E-88 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TREPR_2863 ff5e0eb88bb59df4d31e71dc9296bf20 476 Pfam PF07559 Flagellar basal body protein FlaE 198 356 4.3E-16 T 13-10-2018 IPR011491 Flagellar hook protein FlgE TREPR_2863 ff5e0eb88bb59df4d31e71dc9296bf20 476 SUPERFAMILY SSF117143 92 436 8.89E-67 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TREPR_2863 ff5e0eb88bb59df4d31e71dc9296bf20 476 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 397 474 4.0E-21 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TREPR_2863 ff5e0eb88bb59df4d31e71dc9296bf20 476 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TREPR_2863 ff5e0eb88bb59df4d31e71dc9296bf20 476 Gene3D G3DSA:2.60.98.20 168 357 4.9E-11 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily TREPR_2863 ff5e0eb88bb59df4d31e71dc9296bf20 476 Pfam PF00460 Flagella basal body rod protein 8 35 1.6E-11 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TREPR_0591 d0a18c132efbc2d71e6c775254158f66 355 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 355 154.091 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 TREPR_0591 d0a18c132efbc2d71e6c775254158f66 355 Gene3D G3DSA:3.20.20.150 1 355 1.3E-139 T 13-10-2018 TREPR_0591 d0a18c132efbc2d71e6c775254158f66 355 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 353 2.1E-109 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 TREPR_0591 d0a18c132efbc2d71e6c775254158f66 355 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 352 5.8E-140 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 TREPR_0591 d0a18c132efbc2d71e6c775254158f66 355 PIRSF PIRSF016049 1 169 1.9E-44 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 TREPR_0591 d0a18c132efbc2d71e6c775254158f66 355 PIRSF PIRSF016049 160 355 5.3E-71 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 TREPR_0591 d0a18c132efbc2d71e6c775254158f66 355 SUPERFAMILY SSF51658 1 352 1.96E-85 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily TREPR_0927 8c7ab842e998bbd192d7928edbc67b96 226 ProSitePatterns PS01199 Ribosomal protein L1 signature. 117 135 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_0927 8c7ab842e998bbd192d7928edbc67b96 226 Pfam PF00687 Ribosomal protein L1p/L10e family 30 216 4.1E-50 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein TREPR_0927 8c7ab842e998bbd192d7928edbc67b96 226 Gene3D G3DSA:3.40.50.790 64 155 1.3E-77 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich TREPR_0927 8c7ab842e998bbd192d7928edbc67b96 226 SUPERFAMILY SSF56808 5 221 5.62E-75 T 13-10-2018 IPR023674 Ribosomal protein L1-like TREPR_0927 8c7ab842e998bbd192d7928edbc67b96 226 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 223 2.6E-95 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TREPR_0927 8c7ab842e998bbd192d7928edbc67b96 226 PIRSF PIRSF002155 1 223 1.1E-75 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_0927 8c7ab842e998bbd192d7928edbc67b96 226 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 225 37.536 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TREPR_0927 8c7ab842e998bbd192d7928edbc67b96 226 Gene3D G3DSA:3.30.190.20 22 218 1.3E-77 T 13-10-2018 TREPR_0687 d3055aabc76303c56cd2c82d45c8f17c 335 SUPERFAMILY SSF53795 147 314 1.65E-41 T 13-10-2018 TREPR_0687 d3055aabc76303c56cd2c82d45c8f17c 335 Gene3D G3DSA:3.40.1390.20 21 144 7.7E-34 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily TREPR_0687 d3055aabc76303c56cd2c82d45c8f17c 335 Pfam PF02603 HPr Serine kinase N terminus 22 142 7.8E-34 T 13-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 TREPR_0687 d3055aabc76303c56cd2c82d45c8f17c 335 Pfam PF07475 HPr Serine kinase C-terminal domain 146 314 2.8E-73 T 13-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 TREPR_0687 d3055aabc76303c56cd2c82d45c8f17c 335 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 19 317 1.1E-113 T 13-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 TREPR_0687 d3055aabc76303c56cd2c82d45c8f17c 335 SUPERFAMILY SSF75138 26 146 1.23E-28 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily TREPR_0687 d3055aabc76303c56cd2c82d45c8f17c 335 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 11 322 38.563 T 13-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 TREPR_0687 d3055aabc76303c56cd2c82d45c8f17c 335 Gene3D G3DSA:3.40.50.300 145 328 2.8E-74 T 13-10-2018 TREPR_1059 3f5b14086b18bd1115d8a9b13177c263 306 SUPERFAMILY SSF103481 42 150 4.58E-9 T 13-10-2018 TREPR_1059 3f5b14086b18bd1115d8a9b13177c263 306 SUPERFAMILY SSF103481 196 293 3.01E-11 T 13-10-2018 TREPR_1059 3f5b14086b18bd1115d8a9b13177c263 306 Pfam PF00892 EamA-like transporter family 7 147 3.0E-19 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TREPR_1059 3f5b14086b18bd1115d8a9b13177c263 306 Pfam PF00892 EamA-like transporter family 157 289 6.8E-20 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TREPR_2364 179757de5d85fbcecd2d0b46663215bb 432 Gene3D G3DSA:3.20.20.60 135 431 1.1E-67 T 13-10-2018 TREPR_2364 179757de5d85fbcecd2d0b46663215bb 432 TIGRFAM TIGR02320 PEP_mutase: phosphoenolpyruvate mutase 148 431 9.8E-120 T 13-10-2018 IPR012698 Phosphoenolpyruvate phosphomutase, core GO:0050188 KEGG: 00440+5.4.2.9|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7419|MetaCyc: PWY-7510|MetaCyc: PWY-7769 TREPR_2364 179757de5d85fbcecd2d0b46663215bb 432 Gene3D G3DSA:3.40.50.620 1 133 3.9E-24 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_2364 179757de5d85fbcecd2d0b46663215bb 432 SUPERFAMILY SSF52374 1 129 4.03E-13 T 13-10-2018 TREPR_2364 179757de5d85fbcecd2d0b46663215bb 432 SUPERFAMILY SSF51621 112 431 5.76E-62 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_2364 179757de5d85fbcecd2d0b46663215bb 432 Pfam PF01467 Cytidylyltransferase-like 11 95 6.7E-8 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TREPR_2364 179757de5d85fbcecd2d0b46663215bb 432 Pfam PF13714 Phosphoenolpyruvate phosphomutase 148 405 8.9E-62 T 13-10-2018 TREPR_1823 d114b604bbd2a91ee9e7f6709bd30801 254 Pfam PF00149 Calcineurin-like phosphoesterase 3 218 3.2E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_1823 d114b604bbd2a91ee9e7f6709bd30801 254 Gene3D G3DSA:3.60.21.10 1 235 1.3E-10 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_1823 d114b604bbd2a91ee9e7f6709bd30801 254 SUPERFAMILY SSF56300 3 219 1.12E-15 T 13-10-2018 TREPR_1140 af6b0d41ea24fdeac856d72229b6d2b0 237 PIRSF PIRSF005624 1 196 4.7E-39 T 13-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 TREPR_1140 af6b0d41ea24fdeac856d72229b6d2b0 237 SUPERFAMILY SSF52540 4 183 3.3E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1140 af6b0d41ea24fdeac856d72229b6d2b0 237 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 164 4.2E-9 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TREPR_1140 af6b0d41ea24fdeac856d72229b6d2b0 237 Gene3D G3DSA:3.40.50.300 1 190 4.3E-22 T 13-10-2018 TREPR_1312 c29639ced4ba6338109bf976da8ae001 405 Gene3D G3DSA:3.20.20.210 112 403 5.2E-55 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1312 c29639ced4ba6338109bf976da8ae001 405 SUPERFAMILY SSF51726 2 404 4.32E-35 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1312 c29639ced4ba6338109bf976da8ae001 405 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 151 400 1.2E-21 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 264 36.858 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 3 266 7.5E-108 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 SUPERFAMILY SSF52096 13 265 4.26E-77 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 234 243 1.3E-35 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 112 126 1.3E-35 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 183 200 1.3E-35 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 146 164 1.3E-35 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 212 223 1.3E-35 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 Pfam PF01039 Carboxyl transferase domain 42 224 7.6E-19 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TREPR_0989 8d871c8481dbbfd48bfd97a6a0f26f6f 272 Gene3D G3DSA:3.90.226.10 12 267 1.7E-83 T 13-10-2018 TREPR_1696 db3dde231dfd6cab7185fe6fe1ca6f5d 269 SUPERFAMILY SSF52540 1 240 5.76E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1696 db3dde231dfd6cab7185fe6fe1ca6f5d 269 SMART SM00382 31 240 5.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1696 db3dde231dfd6cab7185fe6fe1ca6f5d 269 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1696 db3dde231dfd6cab7185fe6fe1ca6f5d 269 Pfam PF00005 ABC transporter 22 182 3.7E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1696 db3dde231dfd6cab7185fe6fe1ca6f5d 269 Gene3D G3DSA:3.40.50.300 1 266 2.9E-52 T 13-10-2018 TREPR_0777 c07c89558b1b79fe1945cdfaa6607f59 202 SUPERFAMILY SSF52980 15 192 5.69E-12 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_0334 0fd43649ff0a92ed315fbcfd679b8eab 278 SUPERFAMILY SSF52518 5 275 2.95E-65 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0334 0fd43649ff0a92ed315fbcfd679b8eab 278 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 24 275 6.2E-33 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TREPR_0334 0fd43649ff0a92ed315fbcfd679b8eab 278 Gene3D G3DSA:3.40.50.970 2 277 5.2E-82 T 13-10-2018 TREPR_0334 0fd43649ff0a92ed315fbcfd679b8eab 278 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TREPR_3237 a059d5bc6b3462f63c8f83d727155f1c 213 Pfam PF02589 LUD domain 16 207 1.1E-49 T 13-10-2018 IPR003741 LUD domain TREPR_3237 a059d5bc6b3462f63c8f83d727155f1c 213 SUPERFAMILY SSF100950 19 157 2.93E-5 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_3237 a059d5bc6b3462f63c8f83d727155f1c 213 PIRSF PIRSF020269 2 213 1.1E-66 T 13-10-2018 IPR009501 Uncharacterised conserved protein UCP020269 TREPR_3302 d91ec3d68ea4341bf2073bfdfa6b3601 163 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 13 159 3.8E-43 T 13-10-2018 TREPR_3302 d91ec3d68ea4341bf2073bfdfa6b3601 163 SUPERFAMILY SSF52833 11 161 2.91E-42 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_3302 d91ec3d68ea4341bf2073bfdfa6b3601 163 Gene3D G3DSA:1.10.10.1590 10 71 1.9E-14 T 13-10-2018 TREPR_3302 d91ec3d68ea4341bf2073bfdfa6b3601 163 Gene3D G3DSA:3.40.30.10 72 159 6.3E-23 T 13-10-2018 TREPR_3302 d91ec3d68ea4341bf2073bfdfa6b3601 163 PIRSF PIRSF000216 7 163 1.8E-44 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3302 d91ec3d68ea4341bf2073bfdfa6b3601 163 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0443 7850d4b18b4ee319c163851f99f3365d 302 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 274 7.1E-18 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 Pfam PF04055 Radical SAM superfamily 161 333 2.4E-29 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 Gene3D G3DSA:3.80.30.20 154 389 4.8E-83 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 Pfam PF00919 Uncharacterized protein family UPF0004 3 104 1.3E-24 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 SUPERFAMILY SSF102114 150 381 4.84E-57 T 13-10-2018 TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 161 181 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 SMART SM00729 157 376 7.4E-55 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 Pfam PF01938 TRAM domain 388 433 2.2E-9 T 13-10-2018 IPR002792 TRAM domain TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 2 447 1.3E-143 T 13-10-2018 TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 Gene3D G3DSA:3.40.50.12160 1 130 2.4E-25 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TREPR_1730 2b64f33c1ef69a843a8012d7306909c7 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 442 7.0E-128 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TREPR_1545 9b7404cdcc796372e8d37a6c8c39f495 141 PRINTS PR01853 Bacterial YajC preprotein translocase signature 45 63 2.4E-14 T 13-10-2018 IPR003849 Preprotein translocase YajC TREPR_1545 9b7404cdcc796372e8d37a6c8c39f495 141 PRINTS PR01853 Bacterial YajC preprotein translocase signature 25 45 2.4E-14 T 13-10-2018 IPR003849 Preprotein translocase YajC TREPR_1545 9b7404cdcc796372e8d37a6c8c39f495 141 Pfam PF02699 Preprotein translocase subunit 27 102 1.3E-30 T 13-10-2018 IPR003849 Preprotein translocase YajC TREPR_1545 9b7404cdcc796372e8d37a6c8c39f495 141 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 24 105 9.9E-31 T 13-10-2018 IPR003849 Preprotein translocase YajC TREPR_1545 9b7404cdcc796372e8d37a6c8c39f495 141 SMART SM01323 23 105 6.5E-43 T 13-10-2018 IPR003849 Preprotein translocase YajC TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 SUPERFAMILY SSF50447 260 388 1.87E-21 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 Pfam PF14492 Elongation Factor G, domain II 397 470 3.0E-24 T 13-10-2018 TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 Pfam PF00679 Elongation factor G C-terminus 594 680 4.5E-25 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 Pfam PF00009 Elongation factor Tu GTP binding domain 8 276 1.5E-37 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 SUPERFAMILY SSF54980 396 472 1.55E-14 T 13-10-2018 IPR035647 EF-G domain III/V-like TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 SUPERFAMILY SSF52540 5 276 1.69E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 SMART SM00889 473 591 2.3E-67 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 Gene3D G3DSA:3.30.70.870 426 476 2.6E-15 T 13-10-2018 TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 SUPERFAMILY SSF54980 596 686 2.01E-23 T 13-10-2018 IPR035647 EF-G domain III/V-like TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 SUPERFAMILY SSF54211 472 592 8.85E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 Gene3D G3DSA:3.30.230.10 477 681 5.1E-83 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 157 7.6E-13 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 SMART SM00838 593 681 7.6E-26 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 Gene3D G3DSA:3.30.70.240 597 668 5.1E-83 T 13-10-2018 TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 Gene3D G3DSA:3.40.50.300 4 281 6.0E-70 T 13-10-2018 TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 Gene3D G3DSA:2.40.30.10 284 409 7.9E-29 T 13-10-2018 TREPR_2447 28b685c7a0eea8168de5b153290e8508 695 Pfam PF03764 Elongation factor G, domain IV 472 591 5.5E-44 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TREPR_0744 d5cc524c1667f4d31fc9d0e615126a46 161 SUPERFAMILY SSF46785 2 138 4.28E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0744 d5cc524c1667f4d31fc9d0e615126a46 161 Pfam PF02082 Transcriptional regulator 2 82 8.4E-19 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type TREPR_0744 d5cc524c1667f4d31fc9d0e615126a46 161 Gene3D G3DSA:1.10.10.10 1 142 2.5E-43 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 Gene3D G3DSA:1.10.8.60 202 276 8.2E-27 T 13-10-2018 TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 273 346 1.5E-31 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 359 142.674 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 SMART SM00382 71 205 7.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 Gene3D G3DSA:1.10.10.10 277 354 6.3E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 SUPERFAMILY SSF52540 40 270 2.33E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 271 347 1.0E-26 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 44 346 2.7E-136 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 Gene3D G3DSA:3.40.50.300 40 201 2.3E-36 T 13-10-2018 TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 30 255 1.7E-100 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 TREPR_1809 56980c8181ec2076c277ae4a0ab3b189 359 SUPERFAMILY SSF46785 276 348 4.22E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SUPERFAMILY SSF51126 738 995 5.57E-7 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 Gene3D G3DSA:2.160.20.20 753 1022 5.5E-6 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 Gene3D G3DSA:2.160.20.20 424 703 1.3E-6 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 906 931 4000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 961 993 54.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 820 845 2200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 691 719 710.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 659 686 4100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 593 623 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 724 751 860.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 756 785 870.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 633 654 10000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 864 901 6100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3171 4631fbb175cc555b6f5cfc8b5dff5b52 1095 SMART SM00710 571 592 20.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3081 53ed616f3c90e6766327eefe4850b7d2 207 Gene3D G3DSA:3.30.110.40 2 83 4.7E-22 T 13-10-2018 IPR036868 TusA-like domain superfamily TREPR_3081 53ed616f3c90e6766327eefe4850b7d2 207 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 4 207 5.6E-56 T 13-10-2018 IPR019870 Selenium metabolism protein YedF TREPR_3081 53ed616f3c90e6766327eefe4850b7d2 207 SUPERFAMILY SSF64307 1 70 9.94E-13 T 13-10-2018 IPR036868 TusA-like domain superfamily TREPR_3081 53ed616f3c90e6766327eefe4850b7d2 207 Pfam PF01206 Sulfurtransferase TusA 2 70 5.1E-13 T 13-10-2018 IPR001455 TusA-like domain TREPR_3081 53ed616f3c90e6766327eefe4850b7d2 207 SUPERFAMILY SSF75169 111 196 3.03E-9 T 13-10-2018 IPR027396 DsrEFH-like TREPR_1913 7af626c69c30132e8e943c3da0802036 242 Pfam PF01553 Acyltransferase 62 187 3.5E-26 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TREPR_1913 7af626c69c30132e8e943c3da0802036 242 SUPERFAMILY SSF69593 21 239 2.35E-45 T 13-10-2018 TREPR_1913 7af626c69c30132e8e943c3da0802036 242 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 59 187 1.5E-36 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 TREPR_1913 7af626c69c30132e8e943c3da0802036 242 SMART SM00563 76 190 4.2E-29 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TREPR_1498 11876b4ef0e313d4619ba99533eff4a7 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.3E-52 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1498 11876b4ef0e313d4619ba99533eff4a7 121 Gene3D G3DSA:4.10.910.10 72 121 2.2E-27 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1498 11876b4ef0e313d4619ba99533eff4a7 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.7E-30 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1498 11876b4ef0e313d4619ba99533eff4a7 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.109 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1498 11876b4ef0e313d4619ba99533eff4a7 121 SUPERFAMILY SSF46946 2 120 3.27E-44 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TREPR_1498 11876b4ef0e313d4619ba99533eff4a7 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1498 11876b4ef0e313d4619ba99533eff4a7 121 Gene3D G3DSA:1.10.8.50 1 71 1.3E-27 T 13-10-2018 TREPR_1498 11876b4ef0e313d4619ba99533eff4a7 121 PIRSF PIRSF002134 1 121 1.3E-43 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1923 565503459b0bf4f7e8637cafb252fdd7 385 Gene3D G3DSA:3.30.450.20 54 182 4.7E-6 T 13-10-2018 TREPR_1923 565503459b0bf4f7e8637cafb252fdd7 385 Gene3D G3DSA:1.10.3210.10 183 385 4.9E-64 T 13-10-2018 TREPR_1923 565503459b0bf4f7e8637cafb252fdd7 385 SUPERFAMILY SSF109604 193 369 1.63E-32 T 13-10-2018 TREPR_1923 565503459b0bf4f7e8637cafb252fdd7 385 Pfam PF01966 HD domain 207 332 1.8E-16 T 13-10-2018 IPR006674 HD domain TREPR_1923 565503459b0bf4f7e8637cafb252fdd7 385 SMART SM00471 201 342 4.4E-6 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_1196 1a25f7ea5c97abc1754e2da437689284 110 Gene3D G3DSA:2.10.260.10 23 103 5.3E-12 T 13-10-2018 TREPR_1196 1a25f7ea5c97abc1754e2da437689284 110 SMART SM00966 32 75 8.4E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_1196 1a25f7ea5c97abc1754e2da437689284 110 SUPERFAMILY SSF89447 27 89 2.44E-14 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily TREPR_1196 1a25f7ea5c97abc1754e2da437689284 110 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 34 74 6.4E-6 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_0401 96d9b7f8df70f0043bdce793a82071d1 331 Gene3D G3DSA:1.10.260.40 3 59 3.4E-20 T 13-10-2018 TREPR_0401 96d9b7f8df70f0043bdce793a82071d1 331 Pfam PF13377 Periplasmic binding protein-like domain 166 327 3.8E-36 T 13-10-2018 TREPR_0401 96d9b7f8df70f0043bdce793a82071d1 331 SUPERFAMILY SSF47413 1 59 2.69E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0401 96d9b7f8df70f0043bdce793a82071d1 331 SMART SM00354 1 71 2.9E-26 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0401 96d9b7f8df70f0043bdce793a82071d1 331 SUPERFAMILY SSF53822 61 328 1.65E-67 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0401 96d9b7f8df70f0043bdce793a82071d1 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.1E-15 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0401 96d9b7f8df70f0043bdce793a82071d1 331 Gene3D G3DSA:3.40.50.2300 158 324 2.8E-69 T 13-10-2018 TREPR_0401 96d9b7f8df70f0043bdce793a82071d1 331 Gene3D G3DSA:3.40.50.2300 62 319 2.8E-69 T 13-10-2018 TREPR_1155 276e78cb1c0ea990fc8fbba5f229ff43 138 SUPERFAMILY SSF50630 29 118 1.97E-7 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily TREPR_1155 276e78cb1c0ea990fc8fbba5f229ff43 138 Gene3D G3DSA:2.40.70.10 26 131 7.0E-10 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily TREPR_1155 276e78cb1c0ea990fc8fbba5f229ff43 138 Pfam PF13650 Aspartyl protease 30 107 1.6E-8 T 13-10-2018 TREPR_3069 018a13e88d8029f8b5ba4eeb02dca048 631 SUPERFAMILY SSF56821 20 631 1.57E-167 T 13-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 TREPR_3069 018a13e88d8029f8b5ba4eeb02dca048 631 Pfam PF03063 Prismane/CO dehydrogenase family 50 611 1.0E-150 T 13-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3069 018a13e88d8029f8b5ba4eeb02dca048 631 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 20 631 2.2E-184 T 13-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 TREPR_3069 018a13e88d8029f8b5ba4eeb02dca048 631 Gene3D G3DSA:1.20.1270.30 64 234 5.6E-60 T 13-10-2018 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 TREPR_3069 018a13e88d8029f8b5ba4eeb02dca048 631 PIRSF PIRSF005023 4 631 1.3E-207 T 13-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 TREPR_3069 018a13e88d8029f8b5ba4eeb02dca048 631 Gene3D G3DSA:3.40.50.2030 235 402 1.4E-66 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3069 018a13e88d8029f8b5ba4eeb02dca048 631 Gene3D G3DSA:3.40.50.2030 405 628 1.4E-78 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_0328 79a927417e5af32a4627d3e97921ada5 145 SUPERFAMILY SSF51182 9 136 6.85E-36 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_0328 79a927417e5af32a4627d3e97921ada5 145 Pfam PF05523 WxcM-like, C-terminal 9 136 8.4E-51 T 13-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 TREPR_0328 79a927417e5af32a4627d3e97921ada5 145 Gene3D G3DSA:2.60.120.10 1 139 1.9E-48 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_3471 59f73fdf487be8aa1c5cbb92a643518a 57 SUPERFAMILY SSF54786 1 56 1.1E-10 T 13-10-2018 TREPR_3471 59f73fdf487be8aa1c5cbb92a643518a 57 Gene3D G3DSA:3.30.920.30 1 57 3.2E-8 T 13-10-2018 IPR038570 HicA superfamily TREPR_3471 59f73fdf487be8aa1c5cbb92a643518a 57 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 54 1.5E-10 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TREPR_3209 a1ad9dd0234f3083843be7c8296137cf 208 Gene3D G3DSA:3.30.230.40 91 208 3.0E-35 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 TREPR_3209 a1ad9dd0234f3083843be7c8296137cf 208 Gene3D G3DSA:3.30.230.40 1 90 3.3E-35 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 TREPR_3209 a1ad9dd0234f3083843be7c8296137cf 208 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 34 185 3.4E-55 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TREPR_3209 a1ad9dd0234f3083843be7c8296137cf 208 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TREPR_3209 a1ad9dd0234f3083843be7c8296137cf 208 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 207 40.583 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TREPR_3209 a1ad9dd0234f3083843be7c8296137cf 208 SUPERFAMILY SSF54211 3 87 1.14E-30 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_3209 a1ad9dd0234f3083843be7c8296137cf 208 SUPERFAMILY SSF54211 88 191 2.02E-26 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TREPR_2425 d52ad3b5eef3b803a4b514a6093f7c12 386 Pfam PF08495 FIST N domain 47 228 5.1E-11 T 13-10-2018 IPR013702 FIST domain, N-terminal TREPR_2425 d52ad3b5eef3b803a4b514a6093f7c12 386 Pfam PF10442 FIST C domain 234 364 2.1E-10 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 TREPR_2425 d52ad3b5eef3b803a4b514a6093f7c12 386 SMART SM01204 230 365 2.1E-5 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 TREPR_1420 1b50e009b13afe6031d0d5d8d47eb164 234 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 190 1.9E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1420 1b50e009b13afe6031d0d5d8d47eb164 234 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 185 3.8E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1420 1b50e009b13afe6031d0d5d8d47eb164 234 SUPERFAMILY SSF56784 4 225 4.75E-31 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_1420 1b50e009b13afe6031d0d5d8d47eb164 234 Gene3D G3DSA:3.40.50.1000 1 197 4.6E-32 T 13-10-2018 IPR023214 HAD superfamily TREPR_1420 1b50e009b13afe6031d0d5d8d47eb164 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 2.2E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1420 1b50e009b13afe6031d0d5d8d47eb164 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.2E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1420 1b50e009b13afe6031d0d5d8d47eb164 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 2.2E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1420 1b50e009b13afe6031d0d5d8d47eb164 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 2.2E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TREPR_1420 1b50e009b13afe6031d0d5d8d47eb164 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 100 190 7.4E-13 T 13-10-2018 TREPR_1511 511521f87e6bdf123ae704d629c44eec 336 PIRSF PIRSF002825 1 326 4.1E-50 T 13-10-2018 IPR026045 Ferric binding protein TREPR_1511 511521f87e6bdf123ae704d629c44eec 336 Pfam PF13343 Bacterial extracellular solute-binding protein 91 289 1.9E-19 T 13-10-2018 TREPR_1511 511521f87e6bdf123ae704d629c44eec 336 SUPERFAMILY SSF53850 35 315 8.51E-52 T 13-10-2018 TREPR_1511 511521f87e6bdf123ae704d629c44eec 336 Gene3D G3DSA:3.40.190.10 137 314 6.6E-54 T 13-10-2018 TREPR_1511 511521f87e6bdf123ae704d629c44eec 336 Gene3D G3DSA:3.40.190.10 42 303 6.6E-54 T 13-10-2018 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 SUPERFAMILY SSF56821 1 519 9.94E-172 T 13-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 Gene3D G3DSA:1.20.1270.20 114 197 6.9E-29 T 13-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 Gene3D G3DSA:3.40.50.2030 351 519 1.9E-64 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 PIRSF PIRSF000076 92 521 5.9E-183 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 PIRSF PIRSF000076 1 104 6.5E-22 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 Gene3D G3DSA:1.20.1270.20 1 112 1.5E-28 T 13-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 519 2.3E-206 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 520 19.393 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 Gene3D G3DSA:3.40.50.2030 199 350 9.8E-62 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3465 1bbc8b2a4b519987a011032cb9572fb1 521 Pfam PF03063 Prismane/CO dehydrogenase family 1 515 1.9E-163 T 13-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_2925 7d16ec229fec9d52d984ab571e00ce23 308 Pfam PF12784 PD-(D/E)XK nuclease family transposase 33 258 9.3E-19 T 13-10-2018 TREPR_2970 fd5b5d0f0c0546cc002f4d79a8d15571 156 SUPERFAMILY SSF103039 1 148 3.79E-33 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_2970 fd5b5d0f0c0546cc002f4d79a8d15571 156 Gene3D G3DSA:3.40.1550.10 1 156 2.0E-42 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_2970 fd5b5d0f0c0546cc002f4d79a8d15571 156 Pfam PF13690 Chemotaxis phosphatase CheX 42 137 2.9E-18 T 13-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain TREPR_2881 cffbaf1ae31ea093660f4b956afae07e 242 SUPERFAMILY SSF52317 2 229 8.76E-49 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_2881 cffbaf1ae31ea093660f4b956afae07e 242 Pfam PF00117 Glutamine amidotransferase class-I 46 184 2.0E-14 T 13-10-2018 IPR017926 Glutamine amidotransferase TREPR_2881 cffbaf1ae31ea093660f4b956afae07e 242 Gene3D G3DSA:3.40.50.880 1 236 4.8E-60 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_3610 69638263f5cff7412dfc8f58bfd0fe5f 513 SUPERFAMILY SSF51126 8 362 1.53E-17 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_3492 84d561514a44787b7eaadc414c184d4b 246 Pfam PF00857 Isochorismatase family 8 242 3.9E-28 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 TREPR_3492 84d561514a44787b7eaadc414c184d4b 246 SUPERFAMILY SSF52499 3 244 1.13E-41 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TREPR_3492 84d561514a44787b7eaadc414c184d4b 246 Gene3D G3DSA:3.40.50.850 8 240 6.6E-64 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TREPR_1025 6120730f297adefbf77bc4a31300e3dc 157 SUPERFAMILY SSF69765 1 156 1.83E-53 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TREPR_1025 6120730f297adefbf77bc4a31300e3dc 157 Pfam PF02542 YgbB family 3 156 2.1E-53 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TREPR_1025 6120730f297adefbf77bc4a31300e3dc 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TREPR_1025 6120730f297adefbf77bc4a31300e3dc 157 Gene3D G3DSA:3.30.1330.50 1 157 3.8E-56 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TREPR_1025 6120730f297adefbf77bc4a31300e3dc 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 156 1.4E-53 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TREPR_1025 6120730f297adefbf77bc4a31300e3dc 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 32.361 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 Gene3D G3DSA:1.10.3370.10 1 428 5.9E-148 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 Pfam PF00344 SecY translocase 74 416 4.7E-108 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 432 28.38 T 13-10-2018 IPR026593 Protein translocase subunit SecY TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 1.4E-92 T 13-10-2018 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 401 419 1.4E-92 T 13-10-2018 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 1.4E-92 T 13-10-2018 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.4E-92 T 13-10-2018 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 1.4E-92 T 13-10-2018 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 1.4E-92 T 13-10-2018 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.4E-92 T 13-10-2018 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 136 1.4E-92 T 13-10-2018 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.4E-92 T 13-10-2018 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 423 4.0E-117 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 PIRSF PIRSF004557 1 439 3.2E-124 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TREPR_1497 4a96f9ae0e2b036ebc41ad6f48ef6811 442 SUPERFAMILY SSF103491 3 422 3.27E-113 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TREPR_1496 508510ef970d7cb06ee1b7bad6853e5f 150 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 147 18.636 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 TREPR_1496 508510ef970d7cb06ee1b7bad6853e5f 150 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 145 3.5E-34 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P TREPR_1496 508510ef970d7cb06ee1b7bad6853e5f 150 SUPERFAMILY SSF52080 6 145 1.31E-38 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily TREPR_1496 508510ef970d7cb06ee1b7bad6853e5f 150 Gene3D G3DSA:3.100.10.10 70 146 1.4E-20 T 13-10-2018 TREPR_1496 508510ef970d7cb06ee1b7bad6853e5f 150 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 6 145 1.2E-47 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0171 1ec19fc479915ad8a8bd1cd8f28159f6 299 SMART SM00382 49 242 4.5E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0171 1ec19fc479915ad8a8bd1cd8f28159f6 299 Pfam PF00005 ABC transporter 40 180 1.3E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0171 1ec19fc479915ad8a8bd1cd8f28159f6 299 SUPERFAMILY SSF52540 39 232 4.03E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0171 1ec19fc479915ad8a8bd1cd8f28159f6 299 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0171 1ec19fc479915ad8a8bd1cd8f28159f6 299 Gene3D G3DSA:3.40.50.300 29 288 1.0E-60 T 13-10-2018 TREPR_2288 d88143b5beaef9ee75bee97d0b4b30e3 58 Pfam PF03683 Uncharacterised protein family (UPF0175) 1 55 1.3E-16 T 13-10-2018 IPR005368 Uncharacterised protein family UPF0175 TREPR_0833 42c17eaa5d82cb4c3548f4677e69e487 349 Pfam PF09383 NIL domain 274 345 3.3E-17 T 13-10-2018 IPR018449 NIL domain TREPR_0833 42c17eaa5d82cb4c3548f4677e69e487 349 Gene3D G3DSA:3.30.70.260 266 349 7.3E-17 T 13-10-2018 TREPR_0833 42c17eaa5d82cb4c3548f4677e69e487 349 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0833 42c17eaa5d82cb4c3548f4677e69e487 349 SUPERFAMILY SSF55021 254 348 5.95E-19 T 13-10-2018 TREPR_0833 42c17eaa5d82cb4c3548f4677e69e487 349 SUPERFAMILY SSF52540 5 245 2.21E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0833 42c17eaa5d82cb4c3548f4677e69e487 349 SMART SM00930 271 346 1.3E-19 T 13-10-2018 IPR018449 NIL domain TREPR_0833 42c17eaa5d82cb4c3548f4677e69e487 349 Pfam PF00005 ABC transporter 26 174 6.2E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0833 42c17eaa5d82cb4c3548f4677e69e487 349 SMART SM00382 35 223 1.7E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0833 42c17eaa5d82cb4c3548f4677e69e487 349 Gene3D G3DSA:3.40.50.300 2 254 5.7E-76 T 13-10-2018 TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 Gene3D G3DSA:1.10.240.10 195 298 5.8E-110 T 13-10-2018 TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 Pfam PF00579 tRNA synthetases class I (W and Y) 6 285 1.8E-56 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 329 7.2E-84 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.3E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 200 210 1.3E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 65 84 1.3E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 148 169 1.3E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 Gene3D G3DSA:3.40.50.620 6 330 5.8E-110 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_3576 0f376211199c50a083e63cb910eb66cb 332 SUPERFAMILY SSF52374 6 330 6.44E-81 T 13-10-2018 TREPR_1456 4669c8be6222bb443ddf90fc6eddc221 419 Gene3D G3DSA:3.40.50.150 5 164 1.4E-15 T 13-10-2018 TREPR_1456 4669c8be6222bb443ddf90fc6eddc221 419 SUPERFAMILY SSF53335 15 148 6.14E-14 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_1456 4669c8be6222bb443ddf90fc6eddc221 419 Pfam PF05175 Methyltransferase small domain 15 132 2.7E-7 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 TREPR_1401 4c0f8cd4d6940f686766fcecc0ac0a92 259 ProSitePatterns PS01229 Hypothetical cof family signature 2. 205 227 - T 13-10-2018 TREPR_1401 4c0f8cd4d6940f686766fcecc0ac0a92 259 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 251 1.0E-34 T 13-10-2018 TREPR_1401 4c0f8cd4d6940f686766fcecc0ac0a92 259 SUPERFAMILY SSF56784 5 256 9.06E-45 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_1401 4c0f8cd4d6940f686766fcecc0ac0a92 259 Gene3D G3DSA:3.40.50.1000 6 250 1.9E-43 T 13-10-2018 IPR023214 HAD superfamily TREPR_1401 4c0f8cd4d6940f686766fcecc0ac0a92 259 Gene3D G3DSA:3.30.1240.10 84 180 1.9E-43 T 13-10-2018 TREPR_2472 c983bcd59285d3bd246fdb3cd3f05147 100 Gene3D G3DSA:1.10.260.40 1 65 1.8E-16 T 13-10-2018 TREPR_2472 c983bcd59285d3bd246fdb3cd3f05147 100 Pfam PF01381 Helix-turn-helix 5 56 1.4E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2472 c983bcd59285d3bd246fdb3cd3f05147 100 SUPERFAMILY SSF47413 2 64 3.75E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_2472 c983bcd59285d3bd246fdb3cd3f05147 100 SMART SM00530 4 59 2.0E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3461 0ac12ba0aad86d50a34f12329245051b 107 Pfam PF01909 Nucleotidyltransferase domain 22 98 2.5E-12 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TREPR_3461 0ac12ba0aad86d50a34f12329245051b 107 Gene3D G3DSA:3.30.460.10 3 107 7.5E-16 T 13-10-2018 TREPR_3461 0ac12ba0aad86d50a34f12329245051b 107 SUPERFAMILY SSF81301 10 106 9.58E-14 T 13-10-2018 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PIRSF PIRSF019574 1 346 7.9E-91 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 Pfam PF13416 Bacterial extracellular solute-binding protein 45 302 4.1E-23 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 Gene3D G3DSA:3.40.190.10 31 310 1.1E-108 T 13-10-2018 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 2.5E-41 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 2.5E-41 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 2.5E-41 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 251 270 2.5E-41 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 2.5E-41 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 2.5E-41 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 205 224 2.5E-41 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 2.5E-41 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 2.5E-41 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 Gene3D G3DSA:3.40.190.10 134 339 1.1E-108 T 13-10-2018 TREPR_0570 261984dbdbc0354417a37234f6c5a254 346 SUPERFAMILY SSF53850 28 314 6.14E-65 T 13-10-2018 TREPR_2912 4573cb2b0b6a6624b4745661eb5db9ed 169 Gene3D G3DSA:3.40.630.30 1 168 3.6E-48 T 13-10-2018 TREPR_2912 4573cb2b0b6a6624b4745661eb5db9ed 169 Pfam PF13420 Acetyltransferase (GNAT) domain 2 152 1.9E-25 T 13-10-2018 TREPR_2912 4573cb2b0b6a6624b4745661eb5db9ed 169 SUPERFAMILY SSF55729 1 160 1.52E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_1195 fd6146a9ef94f2b267e66bae27a5923c 233 Gene3D G3DSA:2.50.20.10 34 223 9.0E-21 T 13-10-2018 TREPR_1195 fd6146a9ef94f2b267e66bae27a5923c 233 SUPERFAMILY SSF89392 35 222 3.92E-15 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TREPR_0380 fdb3f6a3e659148c82c5e471b9b0a9d4 527 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 122 336 1.3E-48 T 13-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain TREPR_0380 fdb3f6a3e659148c82c5e471b9b0a9d4 527 SUPERFAMILY SSF49503 374 452 1.62E-5 T 13-10-2018 IPR008972 Cupredoxin TREPR_0380 fdb3f6a3e659148c82c5e471b9b0a9d4 527 Pfam PF00403 Heavy-metal-associated domain 10 69 2.1E-12 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TREPR_0380 fdb3f6a3e659148c82c5e471b9b0a9d4 527 Gene3D G3DSA:3.30.70.100 2 72 1.5E-16 T 13-10-2018 TREPR_0380 fdb3f6a3e659148c82c5e471b9b0a9d4 527 Gene3D G3DSA:2.60.40.420 366 459 5.0E-28 T 13-10-2018 IPR008972 Cupredoxin TREPR_0380 fdb3f6a3e659148c82c5e471b9b0a9d4 527 ProSitePatterns PS01047 Heavy-metal-associated domain. 12 41 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TREPR_0380 fdb3f6a3e659148c82c5e471b9b0a9d4 527 SUPERFAMILY SSF55008 4 72 4.19E-17 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TREPR_2013 0c03c10384e4b5e443a26ccbc779e1e1 411 Gene3D G3DSA:3.30.420.280 233 407 4.0E-26 T 13-10-2018 TREPR_2013 0c03c10384e4b5e443a26ccbc779e1e1 411 SUPERFAMILY SSF52540 4 157 3.88E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2013 0c03c10384e4b5e443a26ccbc779e1e1 411 Gene3D G3DSA:3.40.50.300 14 232 2.9E-31 T 13-10-2018 TREPR_2013 0c03c10384e4b5e443a26ccbc779e1e1 411 Pfam PF03237 Terminase-like family 27 244 1.8E-10 T 13-10-2018 IPR004921 Terminase large subunit, T4likevirus-type TREPR_0388 43bbf5668b2dc04b8bae098579ca482a 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 16 261 37.0 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_0388 43bbf5668b2dc04b8bae098579ca482a 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 50 63 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_0388 43bbf5668b2dc04b8bae098579ca482a 265 SUPERFAMILY SSF51366 1 257 4.62E-85 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TREPR_0388 43bbf5668b2dc04b8bae098579ca482a 265 Gene3D G3DSA:3.20.20.70 1 264 2.1E-98 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0388 43bbf5668b2dc04b8bae098579ca482a 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 18 251 8.2E-86 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_0388 43bbf5668b2dc04b8bae098579ca482a 265 Pfam PF00290 Tryptophan synthase alpha chain 16 253 5.6E-91 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 PRINTS PR01607 Apyrase family signature 454 473 6.5E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 PRINTS PR01607 Apyrase family signature 236 259 6.5E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 PRINTS PR01607 Apyrase family signature 382 405 6.5E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 PRINTS PR01607 Apyrase family signature 210 227 6.5E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 PRINTS PR01607 Apyrase family signature 264 284 6.5E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 PRINTS PR01607 Apyrase family signature 42 60 6.5E-38 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 Gene3D G3DSA:3.60.21.10 37 321 3.2E-79 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 ProSitePatterns PS00785 5'-nucleotidase signature 1. 44 56 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 Pfam PF00149 Calcineurin-like phosphoesterase 46 253 5.9E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 Gene3D G3DSA:3.90.780.10 322 519 3.4E-48 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 SUPERFAMILY SSF55816 319 519 5.62E-51 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 Pfam PF02872 5'-nucleotidase, C-terminal domain 334 480 1.1E-34 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1357 8fde2819bcf92981a7e7f875b6893fb1 523 SUPERFAMILY SSF56300 40 318 1.75E-74 T 13-10-2018 TREPR_1819 6f2d31daa93e56af01d9c9b929bded9f 878 Pfam PF12705 PD-(D/E)XK nuclease superfamily 597 871 2.4E-25 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TREPR_2943 551c2bd5a536bfd8a17e0bb79fc97a92 259 Gene3D G3DSA:3.40.50.1010 7 153 5.7E-14 T 13-10-2018 TREPR_2943 551c2bd5a536bfd8a17e0bb79fc97a92 259 Gene3D G3DSA:1.10.10.1880 182 255 1.4E-22 T 13-10-2018 TREPR_2943 551c2bd5a536bfd8a17e0bb79fc97a92 259 Pfam PF12872 OST-HTH/LOTUS domain 176 244 6.4E-14 T 13-10-2018 IPR025605 OST-HTH/LOTUS domain TREPR_2943 551c2bd5a536bfd8a17e0bb79fc97a92 259 Pfam PF01936 NYN domain 16 149 5.5E-32 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type TREPR_3203 93c68d3266217782b26eb26dd035bf31 166 SUPERFAMILY SSF55826 9 158 1.83E-40 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TREPR_3203 93c68d3266217782b26eb26dd035bf31 166 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 9 159 1.3E-56 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC TREPR_3203 93c68d3266217782b26eb26dd035bf31 166 PIRSF PIRSF006181 4 162 2.9E-59 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC TREPR_3203 93c68d3266217782b26eb26dd035bf31 166 Pfam PF04073 Aminoacyl-tRNA editing domain 39 150 4.8E-26 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TREPR_3203 93c68d3266217782b26eb26dd035bf31 166 Gene3D G3DSA:3.90.960.10 3 161 6.3E-52 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TREPR_2920 cd4f7358ea11e8c3b889c9353a186dc6 729 SUPERFAMILY SSF53955 563 715 1.13E-34 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily TREPR_2920 cd4f7358ea11e8c3b889c9353a186dc6 729 Gene3D G3DSA:1.10.530.10 557 723 1.6E-38 T 13-10-2018 TREPR_2920 cd4f7358ea11e8c3b889c9353a186dc6 729 Gene3D G3DSA:1.25.40.10 71 452 7.7E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2920 cd4f7358ea11e8c3b889c9353a186dc6 729 Pfam PF01464 Transglycosylase SLT domain 567 682 1.5E-22 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 TREPR_2920 cd4f7358ea11e8c3b889c9353a186dc6 729 SUPERFAMILY SSF48452 119 339 2.96E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0840 852186ae55bb5f89914df66a89160d1d 504 Gene3D G3DSA:3.80.30.20 212 411 6.1E-19 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TREPR_0840 852186ae55bb5f89914df66a89160d1d 504 SMART SM00729 215 428 4.7E-22 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_0840 852186ae55bb5f89914df66a89160d1d 504 Pfam PF04055 Radical SAM superfamily 220 373 2.2E-10 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_0840 852186ae55bb5f89914df66a89160d1d 504 SUPERFAMILY SSF102114 209 411 6.67E-39 T 13-10-2018 TREPR_0840 852186ae55bb5f89914df66a89160d1d 504 Pfam PF13311 Protein of unknown function (DUF4080) 412 475 6.4E-5 T 13-10-2018 IPR025288 Domain of unknown function DUF4080 TREPR_0840 852186ae55bb5f89914df66a89160d1d 504 Pfam PF02310 B12 binding domain 10 138 3.3E-9 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_1313 f5ba27b70872d1cf3793fc011a89ff3a 433 PIRSF PIRSF006066 7 433 3.0E-152 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TREPR_1313 f5ba27b70872d1cf3793fc011a89ff3a 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 24 427 5.0E-129 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TREPR_1313 f5ba27b70872d1cf3793fc011a89ff3a 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 422 2.9E-113 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TREPR_1365 055e7da198189e39f3b549df0cee4c76 377 Pfam PF01168 Alanine racemase, N-terminal domain 18 219 7.7E-14 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TREPR_1365 055e7da198189e39f3b549df0cee4c76 377 Gene3D G3DSA:3.20.20.10 20 233 1.4E-18 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_1365 055e7da198189e39f3b549df0cee4c76 377 SUPERFAMILY SSF51419 19 236 2.85E-19 T 13-10-2018 IPR029066 PLP-binding barrel TREPR_1954 129b9d853dfe6254f7d96436f22a92d2 189 Gene3D G3DSA:3.40.50.360 1 186 1.6E-32 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_1954 129b9d853dfe6254f7d96436f22a92d2 189 SUPERFAMILY SSF52218 1 188 9.58E-31 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_1954 129b9d853dfe6254f7d96436f22a92d2 189 Pfam PF03358 NADPH-dependent FMN reductase 3 102 8.9E-17 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TREPR_1014 fe34c0820a55d851087ed23ff3fc81a3 340 SUPERFAMILY SSF51735 7 331 4.0E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1014 fe34c0820a55d851087ed23ff3fc81a3 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 223 1.3E-29 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TREPR_1014 fe34c0820a55d851087ed23ff3fc81a3 340 Gene3D G3DSA:3.40.50.720 2 330 8.7E-77 T 13-10-2018 TREPR_3532 56c020429448eeeb4fd1fa3eb5f4bbbd 526 SUPERFAMILY SSF52540 22 248 1.77E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3532 56c020429448eeeb4fd1fa3eb5f4bbbd 526 Pfam PF00005 ABC transporter 39 188 4.8E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3532 56c020429448eeeb4fd1fa3eb5f4bbbd 526 ProSitePatterns PS00211 ABC transporters family signature. 422 436 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3532 56c020429448eeeb4fd1fa3eb5f4bbbd 526 Gene3D G3DSA:3.40.50.300 273 512 5.6E-42 T 13-10-2018 TREPR_3532 56c020429448eeeb4fd1fa3eb5f4bbbd 526 Gene3D G3DSA:3.40.50.300 7 269 2.8E-55 T 13-10-2018 TREPR_3532 56c020429448eeeb4fd1fa3eb5f4bbbd 526 Pfam PF00005 ABC transporter 293 449 1.2E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3532 56c020429448eeeb4fd1fa3eb5f4bbbd 526 SUPERFAMILY SSF52540 275 504 5.74E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3532 56c020429448eeeb4fd1fa3eb5f4bbbd 526 SMART SM00382 47 236 1.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3532 56c020429448eeeb4fd1fa3eb5f4bbbd 526 SMART SM00382 301 492 17.0 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1226 3303316b0c4638ddfabdeefe205a9fb6 165 SMART SM00852 14 158 9.4E-26 T 13-10-2018 IPR001453 MoaB/Mog domain TREPR_1226 3303316b0c4638ddfabdeefe205a9fb6 165 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 11 152 1.2E-34 T 13-10-2018 IPR001453 MoaB/Mog domain TREPR_1226 3303316b0c4638ddfabdeefe205a9fb6 165 Pfam PF00994 Probable molybdopterin binding domain 14 157 1.2E-30 T 13-10-2018 IPR001453 MoaB/Mog domain TREPR_1226 3303316b0c4638ddfabdeefe205a9fb6 165 SUPERFAMILY SSF53218 10 162 1.15E-40 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily TREPR_1226 3303316b0c4638ddfabdeefe205a9fb6 165 Gene3D G3DSA:3.40.980.10 4 165 3.9E-51 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily TREPR_0542 03eea14fafd0c46b5bdd41f4f39e2ba6 433 SUPERFAMILY SSF53807 11 428 3.6E-58 T 13-10-2018 TREPR_0542 03eea14fafd0c46b5bdd41f4f39e2ba6 433 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 13 428 9.8E-47 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 TREPR_0542 03eea14fafd0c46b5bdd41f4f39e2ba6 433 Gene3D G3DSA:3.40.50.1980 159 274 9.7E-23 T 13-10-2018 TREPR_0542 03eea14fafd0c46b5bdd41f4f39e2ba6 433 Gene3D G3DSA:3.40.50.1980 12 158 2.7E-31 T 13-10-2018 TREPR_3256 a42040cab013156977c9b39e1ffd6c07 206 SMART SM00463 120 203 5.6E-13 T 13-10-2018 IPR002625 Smr domain TREPR_3256 a42040cab013156977c9b39e1ffd6c07 206 Pfam PF01713 Smr domain 123 203 8.5E-18 T 13-10-2018 IPR002625 Smr domain TREPR_3256 a42040cab013156977c9b39e1ffd6c07 206 SUPERFAMILY SSF160443 121 203 4.32E-15 T 13-10-2018 IPR036063 Smr domain superfamily TREPR_3256 a42040cab013156977c9b39e1ffd6c07 206 Gene3D G3DSA:3.30.1370.110 94 206 2.2E-19 T 13-10-2018 TREPR_3552 293b7a22496e975e5a32012e500c4e59 288 SUPERFAMILY SSF55729 151 258 9.07E-11 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_3552 293b7a22496e975e5a32012e500c4e59 288 Pfam PF00583 Acetyltransferase (GNAT) family 193 249 4.2E-6 T 13-10-2018 IPR000182 GNAT domain TREPR_3552 293b7a22496e975e5a32012e500c4e59 288 Gene3D G3DSA:3.40.630.30 153 268 1.4E-9 T 13-10-2018 TREPR_3552 293b7a22496e975e5a32012e500c4e59 288 Pfam PF03682 Uncharacterised protein family (UPF0158) 9 123 2.0E-5 T 13-10-2018 IPR005361 Uncharacterised protein family UPF0158 TREPR_0497 9cb8233a7ace7da8f2494f9fa7972c1d 198 SUPERFAMILY SSF46689 7 70 3.26E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_0497 9cb8233a7ace7da8f2494f9fa7972c1d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 6.1E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_0497 9cb8233a7ace7da8f2494f9fa7972c1d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 6.1E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_0497 9cb8233a7ace7da8f2494f9fa7972c1d 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 3.0E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_0497 9cb8233a7ace7da8f2494f9fa7972c1d 198 SUPERFAMILY SSF48498 85 177 1.47E-8 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TREPR_0497 9cb8233a7ace7da8f2494f9fa7972c1d 198 Gene3D G3DSA:1.10.357.10 5 196 2.0E-31 T 13-10-2018 TREPR_1610 5deb700ee44dca03eaf3e17bcd151a9e 432 Pfam PF13416 Bacterial extracellular solute-binding protein 57 372 1.7E-28 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_1610 5deb700ee44dca03eaf3e17bcd151a9e 432 Gene3D G3DSA:3.40.190.10 54 392 2.6E-91 T 13-10-2018 TREPR_1610 5deb700ee44dca03eaf3e17bcd151a9e 432 Gene3D G3DSA:3.40.190.10 153 421 2.6E-91 T 13-10-2018 TREPR_1610 5deb700ee44dca03eaf3e17bcd151a9e 432 SUPERFAMILY SSF53850 21 431 9.15E-67 T 13-10-2018 TREPR_1675 5b70ca6694d64837f173d8c079131865 467 PIRSF PIRSF015658 81 466 1.0E-172 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 TREPR_1675 5b70ca6694d64837f173d8c079131865 467 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 109 464 1.6E-153 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 TREPR_1675 5b70ca6694d64837f173d8c079131865 467 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 110 460 7.4E-169 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 TREPR_0164 dc2bf993bee9b5076efec5bfae6c3d41 369 SUPERFAMILY SSF88713 144 359 4.45E-55 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TREPR_0164 dc2bf993bee9b5076efec5bfae6c3d41 369 Pfam PF04748 Divergent polysaccharide deacetylase 148 359 2.3E-65 T 13-10-2018 IPR006837 Divergent polysaccharide deacetylase TREPR_0164 dc2bf993bee9b5076efec5bfae6c3d41 369 Gene3D G3DSA:3.20.20.370 141 360 1.1E-67 T 13-10-2018 TREPR_0603 5243a820d3addd5e1dfae42a6d92b8a9 273 Gene3D G3DSA:3.40.50.300 1 184 2.6E-42 T 13-10-2018 TREPR_0603 5243a820d3addd5e1dfae42a6d92b8a9 273 Pfam PF13189 Cytidylate kinase-like family 3 166 3.2E-38 T 13-10-2018 TREPR_0603 5243a820d3addd5e1dfae42a6d92b8a9 273 Pfam PF04972 BON domain 209 266 4.0E-6 T 13-10-2018 IPR007055 BON domain TREPR_3635 af2c1f0afc891bb8640bade681828839 537 Pfam PF04326 Putative DNA-binding domain 14 123 5.1E-12 T 13-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 TREPR_3635 af2c1f0afc891bb8640bade681828839 537 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 297 381 2.4E-18 T 13-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain TREPR_3635 af2c1f0afc891bb8640bade681828839 537 Gene3D G3DSA:3.30.950.30 3 126 1.2E-22 T 13-10-2018 IPR038461 Schlafen, AAA domain superfamily TREPR_3635 af2c1f0afc891bb8640bade681828839 537 Gene3D G3DSA:3.30.565.60 222 384 4.0E-41 T 13-10-2018 IPR038475 RecG, C-terminal domain superfamily TREPR_0802 b1f84c75a283809b0819a7f356df4d91 456 Pfam PF01554 MatE 242 397 6.8E-18 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0802 b1f84c75a283809b0819a7f356df4d91 456 Pfam PF01554 MatE 20 181 7.1E-32 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0802 b1f84c75a283809b0819a7f356df4d91 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 410 7.4E-61 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0802 b1f84c75a283809b0819a7f356df4d91 456 PIRSF PIRSF006603 1 456 2.2E-97 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1757 7ff5c408d232b5441da4a044e00afa3b 124 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 109 21.76 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TREPR_1757 7ff5c408d232b5441da4a044e00afa3b 124 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 3.9E-26 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TREPR_1757 7ff5c408d232b5441da4a044e00afa3b 124 SUPERFAMILY SSF89919 2 102 1.44E-25 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily TREPR_1757 7ff5c408d232b5441da4a044e00afa3b 124 Gene3D G3DSA:3.30.300.20 2 104 2.0E-28 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta TREPR_1757 7ff5c408d232b5441da4a044e00afa3b 124 ProSitePatterns PS01319 Ribosome-binding factor A signature. 75 96 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 TREPR_1757 7ff5c408d232b5441da4a044e00afa3b 124 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 96 5.0E-18 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TREPR_1757 7ff5c408d232b5441da4a044e00afa3b 124 Pfam PF02033 Ribosome-binding factor A 5 105 1.9E-25 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TREPR_3619 9456121124f9dd65bf6851df22399657 124 SUPERFAMILY SSF159894 25 106 2.2E-13 T 13-10-2018 TREPR_0961 ff1720a02f18af03fd568c41a00ed9c1 513 SUPERFAMILY SSF52058 146 447 2.49E-17 T 13-10-2018 TREPR_0961 ff1720a02f18af03fd568c41a00ed9c1 513 Gene3D G3DSA:3.80.10.10 157 316 9.6E-37 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0961 ff1720a02f18af03fd568c41a00ed9c1 513 Gene3D G3DSA:3.80.10.10 317 473 1.9E-28 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0961 ff1720a02f18af03fd568c41a00ed9c1 513 Pfam PF13306 Leucine rich repeats (6 copies) 170 287 1.2E-18 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_0961 ff1720a02f18af03fd568c41a00ed9c1 513 Pfam PF13306 Leucine rich repeats (6 copies) 365 461 9.6E-12 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_2327 5ae8ded220ec38af3d32f321165b2e05 167 Pfam PF04093 rod shape-determining protein MreD 9 156 1.7E-14 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TREPR_2327 5ae8ded220ec38af3d32f321165b2e05 167 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 5 154 5.7E-16 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TREPR_3277 5b6d22145cdee03b6bdfe711bf9bfe02 353 Gene3D G3DSA:3.40.50.1980 39 352 1.3E-71 T 13-10-2018 TREPR_3277 5b6d22145cdee03b6bdfe711bf9bfe02 353 Pfam PF01497 Periplasmic binding protein 59 296 7.7E-28 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain TREPR_3277 5b6d22145cdee03b6bdfe711bf9bfe02 353 SUPERFAMILY SSF53807 40 323 1.37E-49 T 13-10-2018 TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 SUPERFAMILY SSF52467 229 393 9.04E-57 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 462 481 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 167 5.1E-56 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 SUPERFAMILY SSF52518 2 175 4.07E-62 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 234 369 1.7E-43 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 Gene3D G3DSA:3.40.50.970 397 598 2.3E-64 T 13-10-2018 TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 Gene3D G3DSA:3.40.50.970 1 176 6.7E-69 T 13-10-2018 TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 Gene3D G3DSA:3.40.50.1220 227 392 2.5E-57 T 13-10-2018 TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 SUPERFAMILY SSF52518 402 597 9.24E-64 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0976 14269265a25359345ea3bc54b427c7f9 599 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 575 1.8E-47 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TREPR_0150 2c6aa887c8e54eec4b756ef224e501a3 69 Pfam PF04102 SlyX 6 69 3.0E-13 T 13-10-2018 IPR007236 SlyX TREPR_0150 2c6aa887c8e54eec4b756ef224e501a3 69 Gene3D G3DSA:1.20.5.340 2 65 5.1E-5 T 13-10-2018 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 4 306 36.008 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 1.5E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 1.5E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.5E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 1.5E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 5 304 3.9E-103 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 Gene3D G3DSA:3.40.50.1370 132 291 5.2E-109 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 302 4.7E-31 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 144 6.6E-43 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 SUPERFAMILY SSF53671 2 305 1.01E-97 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 38 60 4.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 77 86 4.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 4.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 4.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 224 233 4.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 263 268 4.6E-36 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TREPR_3502 14a24834ca796b6c7e918380d4d4a5d7 307 Gene3D G3DSA:3.40.50.1370 5 302 5.2E-109 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TREPR_2281 7549caee69defb30ba9da03229349da8 291 Pfam PF13310 Virulence protein RhuM family 74 151 4.8E-20 T 13-10-2018 IPR011204 Virulence protein RhuM-like TREPR_2281 7549caee69defb30ba9da03229349da8 291 SUPERFAMILY SSF56024 173 261 3.34E-7 T 13-10-2018 TREPR_2211 b240e62b78173993e033daf9377b63da 426 Gene3D G3DSA:3.10.350.10 186 240 7.9E-12 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_2211 b240e62b78173993e033daf9377b63da 426 Pfam PF01551 Peptidase family M23 326 420 2.4E-30 T 13-10-2018 IPR016047 Peptidase M23 TREPR_2211 b240e62b78173993e033daf9377b63da 426 SUPERFAMILY SSF51261 196 424 1.2E-51 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_2211 b240e62b78173993e033daf9377b63da 426 Gene3D G3DSA:2.70.70.10 289 426 4.0E-47 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_2211 b240e62b78173993e033daf9377b63da 426 Gene3D G3DSA:3.10.350.10 241 288 1.1E-10 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_2211 b240e62b78173993e033daf9377b63da 426 SMART SM00257 191 235 4.7E-9 T 13-10-2018 IPR018392 LysM domain TREPR_2211 b240e62b78173993e033daf9377b63da 426 SMART SM00257 241 284 2.4E-11 T 13-10-2018 IPR018392 LysM domain TREPR_2211 b240e62b78173993e033daf9377b63da 426 Pfam PF01476 LysM domain 242 284 2.5E-11 T 13-10-2018 IPR018392 LysM domain TREPR_2211 b240e62b78173993e033daf9377b63da 426 Pfam PF01476 LysM domain 192 235 6.8E-9 T 13-10-2018 IPR018392 LysM domain TREPR_2860 8cf04ad02fa23fd8d25c2c0ff2e1e5c3 243 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 54 1.4E-15 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain TREPR_2860 8cf04ad02fa23fd8d25c2c0ff2e1e5c3 243 Gene3D G3DSA:3.30.1330.60 83 242 4.1E-41 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_2860 8cf04ad02fa23fd8d25c2c0ff2e1e5c3 243 Pfam PF00691 OmpA family 128 231 9.5E-18 T 13-10-2018 IPR006665 OmpA-like domain TREPR_2860 8cf04ad02fa23fd8d25c2c0ff2e1e5c3 243 SUPERFAMILY SSF103088 116 237 3.14E-28 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_0233 01404101e0cd255419c49c676d1232fe 362 Gene3D G3DSA:3.40.50.2300 62 321 7.0E-105 T 13-10-2018 TREPR_0233 01404101e0cd255419c49c676d1232fe 362 Gene3D G3DSA:3.40.50.2300 165 356 7.0E-105 T 13-10-2018 TREPR_0233 01404101e0cd255419c49c676d1232fe 362 SUPERFAMILY SSF53822 57 281 3.73E-12 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0233 01404101e0cd255419c49c676d1232fe 362 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 58 357 5.1E-59 T 13-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TREPR_1092 25d7065271429afca676f46d7480e22e 315 Gene3D G3DSA:3.30.70.1900 178 311 7.4E-8 T 13-10-2018 TREPR_1092 25d7065271429afca676f46d7480e22e 315 Pfam PF10040 CRISPR-associated endoribonuclease Cas6 187 308 1.7E-11 T 13-10-2018 IPR019267 CRISPR-associated protein Cas6, C-terminal TREPR_2442 e72aa772992d0856f884c2b8b953b1ab 638 SUPERFAMILY SSF56719 5 447 9.16E-108 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TREPR_2442 e72aa772992d0856f884c2b8b953b1ab 638 SMART SM00434 2 435 9.6E-114 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_2442 e72aa772992d0856f884c2b8b953b1ab 638 Gene3D G3DSA:3.30.1360.40 205 295 2.4E-109 T 13-10-2018 TREPR_2442 e72aa772992d0856f884c2b8b953b1ab 638 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 23 434 4.6E-112 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TREPR_2442 e72aa772992d0856f884c2b8b953b1ab 638 Gene3D G3DSA:1.10.268.10 332 429 2.4E-109 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TREPR_2442 e72aa772992d0856f884c2b8b953b1ab 638 Gene3D G3DSA:3.90.199.10 23 433 2.4E-109 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TREPR_0417 b9d441e986ab8b9aba5a1ed80a497ba4 322 Gene3D G3DSA:3.20.20.70 1 322 9.6E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0417 b9d441e986ab8b9aba5a1ed80a497ba4 322 SUPERFAMILY SSF51395 1 321 2.84E-78 T 13-10-2018 TREPR_0417 b9d441e986ab8b9aba5a1ed80a497ba4 322 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 321 4.9E-52 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TREPR_1387 3a4c221390735c51380e1a730333cb43 221 Gene3D G3DSA:1.25.40.10 67 220 3.5E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1387 3a4c221390735c51380e1a730333cb43 221 SUPERFAMILY SSF49464 29 105 2.35E-7 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TREPR_1387 3a4c221390735c51380e1a730333cb43 221 SUPERFAMILY SSF48452 102 207 5.96E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3597 fd9cf4ea93e2d57ef3d3ea29545105ab 226 SUPERFAMILY SSF48452 32 214 6.75E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3597 fd9cf4ea93e2d57ef3d3ea29545105ab 226 Gene3D G3DSA:1.25.40.10 19 139 2.3E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3597 fd9cf4ea93e2d57ef3d3ea29545105ab 226 SMART SM00028 73 106 370.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3597 fd9cf4ea93e2d57ef3d3ea29545105ab 226 SMART SM00028 32 65 360.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3597 fd9cf4ea93e2d57ef3d3ea29545105ab 226 SMART SM00028 144 177 0.55 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3597 fd9cf4ea93e2d57ef3d3ea29545105ab 226 SMART SM00028 178 211 3.8E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_3597 fd9cf4ea93e2d57ef3d3ea29545105ab 226 Pfam PF00515 Tetratricopeptide repeat 179 211 4.9E-8 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 TREPR_3597 fd9cf4ea93e2d57ef3d3ea29545105ab 226 Gene3D G3DSA:1.25.40.10 140 221 1.7E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1735 a96f2e768f02172c854f2e16076ae39c 415 SUPERFAMILY SSF53335 64 414 8.22E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_1735 a96f2e768f02172c854f2e16076ae39c 415 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 345 376 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site TREPR_1735 a96f2e768f02172c854f2e16076ae39c 415 SUPERFAMILY SSF50249 4 62 1.26E-7 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_1735 a96f2e768f02172c854f2e16076ae39c 415 Gene3D G3DSA:3.40.50.150 71 147 6.5E-10 T 13-10-2018 TREPR_1735 a96f2e768f02172c854f2e16076ae39c 415 Gene3D G3DSA:2.40.50.140 1 70 1.6E-16 T 13-10-2018 TREPR_1735 a96f2e768f02172c854f2e16076ae39c 415 Gene3D G3DSA:3.40.50.150 215 414 1.0E-36 T 13-10-2018 TREPR_1735 a96f2e768f02172c854f2e16076ae39c 415 Pfam PF05175 Methyltransferase small domain 275 347 6.1E-6 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 TREPR_1952 3dad9ddba327412cc4f7b3215fc31b77 130 Gene3D G3DSA:2.30.110.10 1 130 6.7E-36 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TREPR_1952 3dad9ddba327412cc4f7b3215fc31b77 130 SUPERFAMILY SSF50475 1 122 5.05E-23 T 13-10-2018 TREPR_1952 3dad9ddba327412cc4f7b3215fc31b77 130 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 3 76 1.0E-7 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TREPR_1555 30e68dd1e0d7eb7e36339dc813b86800 209 SUPERFAMILY SSF52242 68 208 3.79E-36 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_1555 30e68dd1e0d7eb7e36339dc813b86800 209 Pfam PF02310 B12 binding domain 89 191 4.0E-21 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TREPR_1555 30e68dd1e0d7eb7e36339dc813b86800 209 Pfam PF02607 B12 binding domain 5 76 1.1E-15 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_1555 30e68dd1e0d7eb7e36339dc813b86800 209 SMART SM01018 1 83 1.2E-23 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_1555 30e68dd1e0d7eb7e36339dc813b86800 209 Gene3D G3DSA:1.10.1240.10 2 79 7.3E-23 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_1555 30e68dd1e0d7eb7e36339dc813b86800 209 SUPERFAMILY SSF47644 2 81 7.85E-20 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TREPR_1555 30e68dd1e0d7eb7e36339dc813b86800 209 Gene3D G3DSA:3.40.50.280 80 209 1.5E-38 T 13-10-2018 TREPR_3570 c9582c55899da5ddce119fe6c73e7d54 454 Gene3D G3DSA:1.20.1250.20 8 209 1.4E-8 T 13-10-2018 TREPR_3570 c9582c55899da5ddce119fe6c73e7d54 454 Gene3D G3DSA:1.20.1250.20 227 444 2.9E-10 T 13-10-2018 TREPR_3570 c9582c55899da5ddce119fe6c73e7d54 454 SUPERFAMILY SSF103473 8 427 5.62E-29 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_3570 c9582c55899da5ddce119fe6c73e7d54 454 Pfam PF13347 MFS/sugar transport protein 26 437 8.6E-62 T 13-10-2018 TREPR_0765 cc67e68e70e78ca84be2e83cd9fb5b26 496 Pfam PF08668 HDOD domain 237 431 5.0E-55 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD TREPR_0765 cc67e68e70e78ca84be2e83cd9fb5b26 496 Gene3D G3DSA:1.10.3210.10 215 488 1.5E-66 T 13-10-2018 TREPR_0765 cc67e68e70e78ca84be2e83cd9fb5b26 496 SUPERFAMILY SSF109604 228 470 4.4E-57 T 13-10-2018 TREPR_0765 cc67e68e70e78ca84be2e83cd9fb5b26 496 TIGRFAM TIGR00277 HDIG: HDIG domain 327 430 1.8E-7 T 13-10-2018 IPR006675 HDIG domain TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 Gene3D G3DSA:3.40.50.2300 1 120 6.7E-35 T 13-10-2018 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 SMART SM00448 1 112 2.5E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 SUPERFAMILY SSF52540 138 379 1.5E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 9.7E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 471 9.7E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 Gene3D G3DSA:3.40.50.300 121 308 5.9E-63 T 13-10-2018 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 Pfam PF00158 Sigma-54 interaction domain 138 304 3.5E-66 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 SMART SM00382 158 302 1.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 Gene3D G3DSA:1.10.8.60 309 384 4.1E-22 T 13-10-2018 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 SUPERFAMILY SSF46689 426 471 2.33E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 SUPERFAMILY SSF52172 1 183 1.25E-42 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 Pfam PF00072 Response regulator receiver domain 3 112 9.6E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 Gene3D G3DSA:1.10.10.60 411 471 2.1E-15 T 13-10-2018 TREPR_0162 676a2d0c89cc00255911d32a95e9b02b 471 Pfam PF02954 Bacterial regulatory protein, Fis family 427 468 9.4E-15 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TREPR_3758 ad502400c267bb0aca747064168a790e 283 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 79 90 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3758 ad502400c267bb0aca747064168a790e 283 Pfam PF04055 Radical SAM superfamily 28 219 3.5E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_3758 ad502400c267bb0aca747064168a790e 283 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 49 60 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3758 ad502400c267bb0aca747064168a790e 283 ProSitePatterns PS01087 Radical activating enzymes signature. 21 42 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 TREPR_3758 ad502400c267bb0aca747064168a790e 283 SUPERFAMILY SSF54862 47 96 7.99E-14 T 13-10-2018 TREPR_3758 ad502400c267bb0aca747064168a790e 283 Gene3D G3DSA:3.20.20.70 7 55 1.7E-12 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3758 ad502400c267bb0aca747064168a790e 283 Gene3D G3DSA:3.30.70.20 56 96 1.3E-7 T 13-10-2018 TREPR_3758 ad502400c267bb0aca747064168a790e 283 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 8 282 7.7E-92 T 13-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW TREPR_3758 ad502400c267bb0aca747064168a790e 283 PIRSF PIRSF000371 2 266 9.0E-55 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 TREPR_3758 ad502400c267bb0aca747064168a790e 283 SUPERFAMILY SSF102114 89 245 2.16E-10 T 13-10-2018 TREPR_3758 ad502400c267bb0aca747064168a790e 283 Gene3D G3DSA:3.80.30.10 117 283 2.8E-22 T 13-10-2018 TREPR_3758 ad502400c267bb0aca747064168a790e 283 Pfam PF13353 4Fe-4S single cluster domain 19 154 8.0E-11 T 13-10-2018 TREPR_2540 83640f4cb4b48f4e1cd69a88758f4477 972 SUPERFAMILY SSF52518 811 966 7.37E-14 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_2540 83640f4cb4b48f4e1cd69a88758f4477 972 Pfam PF04230 Polysaccharide pyruvyl transferase 18 292 1.2E-31 T 13-10-2018 IPR007345 Polysaccharide pyruvyl transferase TREPR_2540 83640f4cb4b48f4e1cd69a88758f4477 972 SUPERFAMILY SSF52518 437 617 1.02E-25 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_2540 83640f4cb4b48f4e1cd69a88758f4477 972 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 437 603 4.4E-21 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TREPR_2540 83640f4cb4b48f4e1cd69a88758f4477 972 Gene3D G3DSA:3.40.50.970 427 599 1.0E-46 T 13-10-2018 TREPR_2540 83640f4cb4b48f4e1cd69a88758f4477 972 Gene3D G3DSA:3.40.50.1220 635 793 2.4E-17 T 13-10-2018 TREPR_2540 83640f4cb4b48f4e1cd69a88758f4477 972 Gene3D G3DSA:3.40.50.970 805 968 1.1E-31 T 13-10-2018 TREPR_3098 871b7002ded34f59a6615eed5f2a3649 172 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3098 871b7002ded34f59a6615eed5f2a3649 172 Pfam PF13247 4Fe-4S dicluster domain 55 149 2.3E-13 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3098 871b7002ded34f59a6615eed5f2a3649 172 SUPERFAMILY SSF54862 4 165 3.08E-40 T 13-10-2018 TREPR_3098 871b7002ded34f59a6615eed5f2a3649 172 Gene3D G3DSA:3.30.70.20 34 171 1.9E-29 T 13-10-2018 TREPR_0991 d7937ff95ad1ca47d60eab822f10aa1e 224 Gene3D G3DSA:1.10.10.10 107 196 1.3E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0991 d7937ff95ad1ca47d60eab822f10aa1e 224 SUPERFAMILY SSF46894 123 188 6.12E-7 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_0991 d7937ff95ad1ca47d60eab822f10aa1e 224 SMART SM00421 126 183 0.0017 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1095 13c7fe49ead796c5a2dcd0c88bffb2da 224 TIGRFAM TIGR02582 cas7_TM1809: CRISPR type III-A/MTUBE-associated RAMP protein Csm3 6 211 1.3E-69 T 13-10-2018 IPR013412 CRISPR-associated RAMP Csm3 TREPR_1095 13c7fe49ead796c5a2dcd0c88bffb2da 224 Pfam PF03787 RAMP superfamily 12 209 8.1E-14 T 13-10-2018 IPR005537 CRISPR type III-associated RAMP protein TREPR_2647 97f67379fad6d9bb84e7fb7f260896d8 356 Gene3D G3DSA:3.40.50.2020 84 317 3.6E-36 T 13-10-2018 TREPR_2647 97f67379fad6d9bb84e7fb7f260896d8 356 Pfam PF14681 Uracil phosphoribosyltransferase 89 313 6.8E-25 T 13-10-2018 TREPR_2647 97f67379fad6d9bb84e7fb7f260896d8 356 SUPERFAMILY SSF53271 66 315 8.29E-31 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_0936 58360e5ca66549033734afec65d74b8e 517 Gene3D G3DSA:3.40.190.10 19 283 1.0E-59 T 13-10-2018 TREPR_0936 58360e5ca66549033734afec65d74b8e 517 SUPERFAMILY SSF53850 47 517 3.44E-117 T 13-10-2018 TREPR_0936 58360e5ca66549033734afec65d74b8e 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 431 2.2E-78 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_0936 58360e5ca66549033734afec65d74b8e 517 PIRSF PIRSF002741 1 517 4.7E-94 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_0936 58360e5ca66549033734afec65d74b8e 517 Gene3D G3DSA:3.10.105.10 284 487 5.7E-50 T 13-10-2018 TREPR_1842 0b0a37a2dd8203ea3835b5389d4b4943 124 Pfam PF04519 Polymer-forming cytoskeletal 16 112 1.9E-25 T 13-10-2018 IPR007607 Bactofilin A/B TREPR_2685 ac2922e8c18ed757c3bb5aed36795677 93 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 93 16.365 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 TREPR_2685 ac2922e8c18ed757c3bb5aed36795677 93 Pfam PF01250 Ribosomal protein S6 3 89 1.1E-16 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2685 ac2922e8c18ed757c3bb5aed36795677 93 Gene3D G3DSA:3.30.70.60 1 93 7.9E-23 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 TREPR_2685 ac2922e8c18ed757c3bb5aed36795677 93 SUPERFAMILY SSF54995 1 93 3.27E-21 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2685 ac2922e8c18ed757c3bb5aed36795677 93 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 1.3E-16 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_0651 902683706af982b23c87720800fefb3b 364 SUPERFAMILY SSF47413 25 84 1.36E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0651 902683706af982b23c87720800fefb3b 364 ProSitePatterns PS00356 LacI-type HTH domain signature. 29 47 - T 13-10-2018 TREPR_0651 902683706af982b23c87720800fefb3b 364 Gene3D G3DSA:3.40.50.2300 87 356 4.5E-65 T 13-10-2018 TREPR_0651 902683706af982b23c87720800fefb3b 364 Gene3D G3DSA:3.40.50.2300 185 361 4.5E-65 T 13-10-2018 TREPR_0651 902683706af982b23c87720800fefb3b 364 SMART SM00354 26 96 2.2E-26 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0651 902683706af982b23c87720800fefb3b 364 Pfam PF00356 Bacterial regulatory proteins, lacI family 28 73 1.8E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0651 902683706af982b23c87720800fefb3b 364 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 38 48 1.5E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0651 902683706af982b23c87720800fefb3b 364 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 28 38 1.5E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0651 902683706af982b23c87720800fefb3b 364 Gene3D G3DSA:1.10.260.40 28 84 2.8E-20 T 13-10-2018 TREPR_0651 902683706af982b23c87720800fefb3b 364 Pfam PF13377 Periplasmic binding protein-like domain 193 364 6.5E-30 T 13-10-2018 TREPR_0651 902683706af982b23c87720800fefb3b 364 SUPERFAMILY SSF53822 85 364 2.16E-58 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1053 7975ad5be57b8ed636b394ccb65e5505 166 Gene3D G3DSA:3.90.1010.20 44 166 4.0E-31 T 13-10-2018 TREPR_3788 01917f340e82aeeda0898640270246f7 164 Pfam PF00731 AIR carboxylase 4 147 1.1E-58 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TREPR_3788 01917f340e82aeeda0898640270246f7 164 Gene3D G3DSA:3.40.50.7700 1 163 3.1E-62 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TREPR_3788 01917f340e82aeeda0898640270246f7 164 SUPERFAMILY SSF52255 2 154 2.49E-57 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TREPR_3788 01917f340e82aeeda0898640270246f7 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 154 29.928 T 13-10-2018 IPR033747 Class I PurE TREPR_3788 01917f340e82aeeda0898640270246f7 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 153 1.9E-57 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TREPR_3788 01917f340e82aeeda0898640270246f7 164 SMART SM01001 1 150 3.0E-82 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TREPR_3788 01917f340e82aeeda0898640270246f7 164 PIRSF PIRSF001338 1 160 3.5E-60 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 TREPR_2674 7d4a18fc3073aa76b7b5452df7f43bda 284 Pfam PF01148 Cytidylyltransferase family 6 281 1.6E-44 T 13-10-2018 TREPR_2081 e39aebe8634c30a34ad6b97e619aa33e 433 Pfam PF05065 Phage capsid family 152 424 8.8E-27 T 13-10-2018 IPR024455 Phage capsid TREPR_2081 e39aebe8634c30a34ad6b97e619aa33e 433 SUPERFAMILY SSF56563 150 426 9.81E-27 T 13-10-2018 TREPR_2081 e39aebe8634c30a34ad6b97e619aa33e 433 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 2 424 4.9E-36 T 13-10-2018 IPR024455 Phage capsid TREPR_1704 435b4294e45ec031d81ea0cfbb9e82f0 365 Gene3D G3DSA:3.40.50.2300 2 132 1.4E-30 T 13-10-2018 TREPR_1704 435b4294e45ec031d81ea0cfbb9e82f0 365 Gene3D G3DSA:1.10.3210.10 139 353 7.9E-66 T 13-10-2018 TREPR_1704 435b4294e45ec031d81ea0cfbb9e82f0 365 SUPERFAMILY SSF109604 152 338 5.65E-29 T 13-10-2018 TREPR_1704 435b4294e45ec031d81ea0cfbb9e82f0 365 Pfam PF00072 Response regulator receiver domain 8 119 7.9E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1704 435b4294e45ec031d81ea0cfbb9e82f0 365 Pfam PF13487 HD domain 223 292 2.2E-15 T 13-10-2018 TREPR_1704 435b4294e45ec031d81ea0cfbb9e82f0 365 SUPERFAMILY SSF52172 6 143 2.13E-32 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1704 435b4294e45ec031d81ea0cfbb9e82f0 365 SMART SM00448 6 118 4.1E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0545 bbed6a1468dafd059b2fc344815abff3 348 Gene3D G3DSA:1.10.1610.10 11 338 7.7E-108 T 13-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TREPR_0545 bbed6a1468dafd059b2fc344815abff3 348 Pfam PF02277 Phosphoribosyltransferase 4 338 8.3E-106 T 13-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TREPR_0545 bbed6a1468dafd059b2fc344815abff3 348 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4 338 8.1E-105 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TREPR_0545 bbed6a1468dafd059b2fc344815abff3 348 SUPERFAMILY SSF52733 5 339 4.19E-94 T 13-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TREPR_0545 bbed6a1468dafd059b2fc344815abff3 348 Gene3D G3DSA:3.40.50.10210 43 321 7.7E-108 T 13-10-2018 TREPR_0512 de2b4f38c92dc40934b19ecccd4bab0f 181 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 3 172 32.603 T 13-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 TREPR_0512 de2b4f38c92dc40934b19ecccd4bab0f 181 Pfam PF02677 Uncharacterized BCR, COG1636 3 171 9.8E-59 T 13-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 TREPR_0937 1a06b6818143051afe632ba3abb3e3f3 201 Gene3D G3DSA:3.40.630.20 1 201 3.1E-46 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 TREPR_0937 1a06b6818143051afe632ba3abb3e3f3 201 SUPERFAMILY SSF53182 2 199 4.32E-38 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 TREPR_0937 1a06b6818143051afe632ba3abb3e3f3 201 PIRSF PIRSF015592 1 201 1.4E-43 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TREPR_0937 1a06b6818143051afe632ba3abb3e3f3 201 Pfam PF01470 Pyroglutamyl peptidase 2 197 6.6E-34 T 13-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 TREPR_0937 1a06b6818143051afe632ba3abb3e3f3 201 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 163 175 4.4E-13 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TREPR_0937 1a06b6818143051afe632ba3abb3e3f3 201 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 4.4E-13 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TREPR_0937 1a06b6818143051afe632ba3abb3e3f3 201 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 133 149 4.4E-13 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TREPR_0937 1a06b6818143051afe632ba3abb3e3f3 201 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 4.4E-13 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 TREPR_2383 f9312d41abb7c3a60f9c1469ff917ff1 177 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 10 174 1.1E-71 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TREPR_2383 f9312d41abb7c3a60f9c1469ff917ff1 177 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 9 176 2.9E-72 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TREPR_2383 f9312d41abb7c3a60f9c1469ff917ff1 177 Gene3D G3DSA:2.60.120.10 1 177 4.6E-69 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_2383 f9312d41abb7c3a60f9c1469ff917ff1 177 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 8 176 7.0E-58 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TREPR_2383 f9312d41abb7c3a60f9c1469ff917ff1 177 SUPERFAMILY SSF51182 4 176 3.56E-72 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_3056 c5f175bac3e24ec4c371d3a2d902f263 201 SMART SM00448 5 118 3.6E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3056 c5f175bac3e24ec4c371d3a2d902f263 201 Pfam PF00072 Response regulator receiver domain 7 118 1.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3056 c5f175bac3e24ec4c371d3a2d902f263 201 Gene3D G3DSA:3.40.50.12740 5 196 5.4E-37 T 13-10-2018 TREPR_3056 c5f175bac3e24ec4c371d3a2d902f263 201 SUPERFAMILY SSF52172 5 134 2.42E-34 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1603 4ba2a1cab27f45f7f24bb0588a3a246c 279 Gene3D G3DSA:1.10.3720.10 4 270 4.9E-49 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1603 4ba2a1cab27f45f7f24bb0588a3a246c 279 SUPERFAMILY SSF161098 6 279 1.83E-56 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1603 4ba2a1cab27f45f7f24bb0588a3a246c 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 265 1.4E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0301 38ec4fbeea60f5e66b7387b02fe62400 241 SUPERFAMILY SSF55315 2 69 1.41E-5 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like TREPR_0301 38ec4fbeea60f5e66b7387b02fe62400 241 SMART SM00967 3 74 0.0049 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TREPR_0301 38ec4fbeea60f5e66b7387b02fe62400 241 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 3 69 1.8E-7 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TREPR_0301 38ec4fbeea60f5e66b7387b02fe62400 241 Pfam PF00588 SpoU rRNA Methylase family 93 232 1.3E-38 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TREPR_0301 38ec4fbeea60f5e66b7387b02fe62400 241 Gene3D G3DSA:3.40.1280.10 79 239 1.3E-51 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TREPR_0301 38ec4fbeea60f5e66b7387b02fe62400 241 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 238 3.6E-61 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 TREPR_0301 38ec4fbeea60f5e66b7387b02fe62400 241 SUPERFAMILY SSF75217 87 239 2.35E-44 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases TREPR_3241 d379adb5f21fe6434fa6f75ebe8484f7 481 PIRSF PIRSF006247 1 481 1.8E-156 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 TREPR_3241 d379adb5f21fe6434fa6f75ebe8484f7 481 Pfam PF02386 Cation transport protein 55 475 1.1E-49 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 TREPR_3679 b06a6cf7fde187c47322a1e12c8ed5a9 111 Gene3D G3DSA:2.120.10.30 1 109 2.3E-10 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TREPR_3679 b06a6cf7fde187c47322a1e12c8ed5a9 111 SUPERFAMILY SSF101898 3 108 5.23E-13 T 13-10-2018 TREPR_0780 a4ad71a8e18449f2decfbfdcf614295b 452 Gene3D G3DSA:1.10.4030.30 63 187 1.1E-13 T 13-10-2018 TREPR_0780 a4ad71a8e18449f2decfbfdcf614295b 452 Gene3D G3DSA:1.10.4030.30 188 288 4.5E-9 T 13-10-2018 TREPR_0780 a4ad71a8e18449f2decfbfdcf614295b 452 SUPERFAMILY SSF109998 92 188 1.18E-12 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily TREPR_0780 a4ad71a8e18449f2decfbfdcf614295b 452 SUPERFAMILY SSF109998 187 304 3.81E-13 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily TREPR_0780 a4ad71a8e18449f2decfbfdcf614295b 452 Pfam PF13145 PPIC-type PPIASE domain 264 399 8.1E-13 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TREPR_0780 a4ad71a8e18449f2decfbfdcf614295b 452 Gene3D G3DSA:3.10.50.40 289 390 1.8E-5 T 13-10-2018 TREPR_0780 a4ad71a8e18449f2decfbfdcf614295b 452 Pfam PF13624 SurA N-terminal domain 93 181 5.4E-9 T 13-10-2018 TREPR_0780 a4ad71a8e18449f2decfbfdcf614295b 452 SUPERFAMILY SSF54534 276 387 2.35E-5 T 13-10-2018 TREPR_2699 506d420ac000df8eb0c2ae5596a26fe5 340 Pfam PF04015 Domain of unknown function (DUF362) 82 294 1.4E-34 T 13-10-2018 IPR007160 Domain of unknown function DUF362 TREPR_2282 0a1c4c071d13bd814e5cd51c2f3680ee 380 SUPERFAMILY SSF116734 232 373 3.43E-17 T 13-10-2018 TREPR_2282 0a1c4c071d13bd814e5cd51c2f3680ee 380 Gene3D G3DSA:3.90.220.20 4 192 1.6E-11 T 13-10-2018 TREPR_2282 0a1c4c071d13bd814e5cd51c2f3680ee 380 Gene3D G3DSA:3.90.220.20 201 374 4.4E-15 T 13-10-2018 TREPR_2282 0a1c4c071d13bd814e5cd51c2f3680ee 380 SUPERFAMILY SSF116734 6 187 7.36E-15 T 13-10-2018 TREPR_2282 0a1c4c071d13bd814e5cd51c2f3680ee 380 Pfam PF01420 Type I restriction modification DNA specificity domain 260 363 9.9E-9 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TREPR_2763 83611b00cb102c5fdcb42ce2b45faa87 278 Pfam PF13277 YmdB-like protein 4 255 1.2E-74 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like TREPR_2763 83611b00cb102c5fdcb42ce2b45faa87 278 SUPERFAMILY SSF56300 1 257 4.93E-46 T 13-10-2018 TREPR_2763 83611b00cb102c5fdcb42ce2b45faa87 278 Gene3D G3DSA:3.60.21.10 1 259 3.8E-75 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_0370 fcf438204e4e706e6c519470de56806c 192 SUPERFAMILY SSF55469 31 191 1.05E-31 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_0370 fcf438204e4e706e6c519470de56806c 192 Pfam PF00881 Nitroreductase family 38 87 3.5E-12 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_0370 fcf438204e4e706e6c519470de56806c 192 Pfam PF00881 Nitroreductase family 89 167 2.4E-9 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_0370 fcf438204e4e706e6c519470de56806c 192 Gene3D G3DSA:3.40.109.10 93 192 3.8E-15 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_0370 fcf438204e4e706e6c519470de56806c 192 Gene3D G3DSA:3.40.109.10 19 92 8.1E-15 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_0259 6ae9cb2ba98eee2d821a6e9cfcb4e05f 192 SUPERFAMILY SSF51735 1 114 1.69E-24 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0259 6ae9cb2ba98eee2d821a6e9cfcb4e05f 192 Gene3D G3DSA:3.30.160.110 114 148 3.0E-8 T 13-10-2018 TREPR_0259 6ae9cb2ba98eee2d821a6e9cfcb4e05f 192 Pfam PF14824 Sirohaem biosynthesis protein central 127 146 8.6E-6 T 13-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TREPR_0259 6ae9cb2ba98eee2d821a6e9cfcb4e05f 192 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 169 6.3E-43 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TREPR_0259 6ae9cb2ba98eee2d821a6e9cfcb4e05f 192 Gene3D G3DSA:3.40.50.720 1 113 4.0E-34 T 13-10-2018 TREPR_0259 6ae9cb2ba98eee2d821a6e9cfcb4e05f 192 SUPERFAMILY SSF75615 109 186 1.7E-14 T 13-10-2018 TREPR_0259 6ae9cb2ba98eee2d821a6e9cfcb4e05f 192 Pfam PF13241 Putative NAD(P)-binding 6 116 1.9E-32 T 13-10-2018 TREPR_3637 6782c6cbf4d5672620899a71feb229cc 505 SUPERFAMILY SSF75304 11 490 1.44E-113 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TREPR_3637 6782c6cbf4d5672620899a71feb229cc 505 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 1 493 66.595 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TREPR_3637 6782c6cbf4d5672620899a71feb229cc 505 Pfam PF01425 Amidase 277 482 2.2E-39 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TREPR_3637 6782c6cbf4d5672620899a71feb229cc 505 Pfam PF01425 Amidase 35 210 8.8E-73 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TREPR_3637 6782c6cbf4d5672620899a71feb229cc 505 ProSitePatterns PS00571 Amidases signature. 118 149 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TREPR_3637 6782c6cbf4d5672620899a71feb229cc 505 Gene3D G3DSA:3.90.1300.10 268 501 3.2E-55 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TREPR_3637 6782c6cbf4d5672620899a71feb229cc 505 Gene3D G3DSA:3.90.1300.10 3 267 1.5E-79 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TREPR_1737 525d49dad3b4092850f771dcc041e500 407 Pfam PF01743 Poly A polymerase head domain 50 165 2.1E-34 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TREPR_1737 525d49dad3b4092850f771dcc041e500 407 SUPERFAMILY SSF81301 35 162 2.94E-35 T 13-10-2018 TREPR_1737 525d49dad3b4092850f771dcc041e500 407 Gene3D G3DSA:1.10.3090.10 172 345 7.3E-23 T 13-10-2018 TREPR_1737 525d49dad3b4092850f771dcc041e500 407 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 192 252 1.6E-12 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TREPR_1737 525d49dad3b4092850f771dcc041e500 407 SUPERFAMILY SSF81891 164 260 7.19E-22 T 13-10-2018 TREPR_1737 525d49dad3b4092850f771dcc041e500 407 Gene3D G3DSA:3.30.460.10 16 161 5.4E-49 T 13-10-2018 TREPR_1737 525d49dad3b4092850f771dcc041e500 407 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 19 272 1.1E-95 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 TREPR_1165 67d952c0fc1fc361e1cb2df9a0d050df 153 Pfam PF02561 Flagellar protein FliS 13 133 4.6E-35 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TREPR_1165 67d952c0fc1fc361e1cb2df9a0d050df 153 Gene3D G3DSA:1.20.120.340 4 137 6.1E-39 T 13-10-2018 TREPR_1165 67d952c0fc1fc361e1cb2df9a0d050df 153 PIRSF PIRSF039090 6 143 8.0E-28 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TREPR_1165 67d952c0fc1fc361e1cb2df9a0d050df 153 TIGRFAM TIGR00208 fliS: flagellar protein FliS 7 134 1.9E-23 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TREPR_1165 67d952c0fc1fc361e1cb2df9a0d050df 153 SUPERFAMILY SSF101116 10 135 7.06E-31 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 TREPR_0569 dbae55c90472f5691e8fec11d86b2f0f 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 287 3.2E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0569 dbae55c90472f5691e8fec11d86b2f0f 288 SUPERFAMILY SSF161098 33 282 4.11E-53 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0569 dbae55c90472f5691e8fec11d86b2f0f 288 Gene3D G3DSA:1.10.3720.10 35 284 6.3E-47 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0184 ea10cdeb46e14a2547a077e52442d9a0 355 SMART SM00267 188 353 1.0E-24 T 13-10-2018 IPR000160 GGDEF domain TREPR_0184 ea10cdeb46e14a2547a077e52442d9a0 355 SUPERFAMILY SSF55073 204 349 1.18E-28 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_0184 ea10cdeb46e14a2547a077e52442d9a0 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 199 353 2.5E-31 T 13-10-2018 IPR000160 GGDEF domain TREPR_0184 ea10cdeb46e14a2547a077e52442d9a0 355 Gene3D G3DSA:3.30.70.270 186 354 1.0E-34 T 13-10-2018 TREPR_0184 ea10cdeb46e14a2547a077e52442d9a0 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 196 351 2.5E-32 T 13-10-2018 IPR000160 GGDEF domain TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 SUPERFAMILY SSF56300 35 366 1.61E-74 T 13-10-2018 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 Gene3D G3DSA:3.60.21.10 33 369 1.9E-109 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 PRINTS PR01607 Apyrase family signature 258 281 1.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 PRINTS PR01607 Apyrase family signature 451 474 1.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 PRINTS PR01607 Apyrase family signature 230 247 1.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 PRINTS PR01607 Apyrase family signature 37 55 1.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 PRINTS PR01607 Apyrase family signature 552 571 1.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 PRINTS PR01607 Apyrase family signature 298 318 1.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 SUPERFAMILY SSF55816 382 614 7.46E-36 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 Pfam PF00149 Calcineurin-like phosphoesterase 45 275 9.0E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 Gene3D G3DSA:3.90.780.10 396 613 3.5E-52 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_1742 aa790501cb0b6967e4f0cd6d0befc063 656 Pfam PF02872 5'-nucleotidase, C-terminal domain 383 575 1.2E-21 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TREPR_2650 918bd65520f1e008060d45b78e09a7e1 186 Pfam PF13161 Protein of unknown function (DUF3996) 65 151 9.4E-5 T 13-10-2018 IPR016489 Uncharacterised conserved protein UCP006685 TREPR_0537 7ed9165cf591d1dc9ab9483e23cb1760 675 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 156 2.0E-21 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain TREPR_0537 7ed9165cf591d1dc9ab9483e23cb1760 675 Gene3D G3DSA:2.40.170.20 169 665 8.3E-43 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TREPR_0537 7ed9165cf591d1dc9ab9483e23cb1760 675 Gene3D G3DSA:2.170.130.10 51 166 1.2E-25 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TREPR_0537 7ed9165cf591d1dc9ab9483e23cb1760 675 SUPERFAMILY SSF56935 48 665 2.28E-74 T 13-10-2018 TREPR_0537 7ed9165cf591d1dc9ab9483e23cb1760 675 Pfam PF00593 TonB dependent receptor 231 665 9.8E-26 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 PIRSF PIRSF000116 202 333 2.9E-19 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 PIRSF PIRSF000116 1 207 4.9E-46 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 SUPERFAMILY SSF48179 184 329 1.02E-69 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 SUPERFAMILY SSF51735 4 183 1.61E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 9.1E-74 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 44.826 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 9.6E-66 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 329 3.8E-139 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 Gene3D G3DSA:1.10.3730.40 183 333 3.0E-69 T 13-10-2018 TREPR_0982 98867cbf860ed5f97fc54a489526a522 333 Gene3D G3DSA:3.40.50.720 1 182 6.2E-79 T 13-10-2018 TREPR_3215 608bc3d9d501c58c3782f8819f65e856 276 PIRSF PIRSF006661 5 276 9.0E-95 T 13-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 TREPR_3215 608bc3d9d501c58c3782f8819f65e856 276 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 24 264 2.0E-74 T 13-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 TREPR_3215 608bc3d9d501c58c3782f8819f65e856 276 SUPERFAMILY SSF52402 22 211 1.57E-32 T 13-10-2018 TREPR_3215 608bc3d9d501c58c3782f8819f65e856 276 Gene3D G3DSA:3.40.50.620 4 172 6.8E-26 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_3215 608bc3d9d501c58c3782f8819f65e856 276 Pfam PF00733 Asparagine synthase 22 87 1.4E-5 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 135 1.3E-37 T 13-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 PRINTS PR01183 Ribonucleotide reductase large chain signature 531 553 6.5E-6 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 PRINTS PR01183 Ribonucleotide reductase large chain signature 263 282 6.5E-6 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 110 911 1.6E-163 T 13-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 Gene3D G3DSA:3.20.70.20 85 363 9.0E-55 T 13-10-2018 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 Gene3D G3DSA:3.20.70.20 368 759 3.5E-89 T 13-10-2018 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 Gene3D G3DSA:3.20.70.20 777 915 1.5E-28 T 13-10-2018 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 Pfam PF02867 Ribonucleotide reductase, barrel domain 186 738 3.2E-105 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 SUPERFAMILY SSF51998 185 905 2.5E-121 T 13-10-2018 TREPR_3178 7ee18f6c8768b9c725b6891751ffb0b2 1176 Pfam PF02867 Ribonucleotide reductase, barrel domain 797 901 2.5E-17 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TREPR_0726 91dbf93133fd2b66b906ffc046f2a7c9 596 Pfam PF00005 ABC transporter 367 516 2.7E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0726 91dbf93133fd2b66b906ffc046f2a7c9 596 Gene3D G3DSA:1.20.1560.10 4 337 2.7E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_0726 91dbf93133fd2b66b906ffc046f2a7c9 596 Gene3D G3DSA:3.40.50.300 341 594 3.3E-92 T 13-10-2018 TREPR_0726 91dbf93133fd2b66b906ffc046f2a7c9 596 SMART SM00382 376 562 1.3E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0726 91dbf93133fd2b66b906ffc046f2a7c9 596 SUPERFAMILY SSF52540 340 587 2.4E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0726 91dbf93133fd2b66b906ffc046f2a7c9 596 SUPERFAMILY SSF90123 21 332 2.35E-70 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_0726 91dbf93133fd2b66b906ffc046f2a7c9 596 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0726 91dbf93133fd2b66b906ffc046f2a7c9 596 Pfam PF00664 ABC transporter transmembrane region 38 304 2.0E-46 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TREPR_2138 7aede88bb22d13980c6d07e493f5b8fa 278 SMART SM00382 56 256 2.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2138 7aede88bb22d13980c6d07e493f5b8fa 278 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2138 7aede88bb22d13980c6d07e493f5b8fa 278 SUPERFAMILY SSF52540 43 242 1.88E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2138 7aede88bb22d13980c6d07e493f5b8fa 278 Pfam PF00005 ABC transporter 47 188 1.7E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2138 7aede88bb22d13980c6d07e493f5b8fa 278 Gene3D G3DSA:3.40.50.300 5 250 1.4E-56 T 13-10-2018 TREPR_0635 ab8487b17b58583ac8c61e15ec87fcdf 407 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 309 385 3.2E-4 T 13-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 TREPR_0635 ab8487b17b58583ac8c61e15ec87fcdf 407 SUPERFAMILY SSF53756 1 403 1.18E-62 T 13-10-2018 TREPR_0635 ab8487b17b58583ac8c61e15ec87fcdf 407 Gene3D G3DSA:3.40.50.2000 215 388 7.8E-71 T 13-10-2018 TREPR_0635 ab8487b17b58583ac8c61e15ec87fcdf 407 Gene3D G3DSA:3.40.50.2000 1 214 7.8E-71 T 13-10-2018 TREPR_0635 ab8487b17b58583ac8c61e15ec87fcdf 407 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 53 4.5E-7 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_1640 122b979c06235c9a8ac5deaf5de3e266 273 Gene3D G3DSA:3.80.10.10 167 246 6.0E-19 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1640 122b979c06235c9a8ac5deaf5de3e266 273 Gene3D G3DSA:3.80.10.10 21 166 6.1E-30 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1640 122b979c06235c9a8ac5deaf5de3e266 273 Pfam PF13306 Leucine rich repeats (6 copies) 57 156 3.2E-22 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_0793 157e55971976d460ba173c615659551b 310 SUPERFAMILY SSF48452 59 211 5.38E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0793 157e55971976d460ba173c615659551b 310 Gene3D G3DSA:1.25.40.10 36 310 1.1E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0793 157e55971976d460ba173c615659551b 310 SUPERFAMILY SSF48452 176 309 2.81E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3198 79d3bbcaa57327d08895eebc76294c8c 391 SUPERFAMILY SSF89260 159 258 1.29E-9 T 13-10-2018 TREPR_3198 79d3bbcaa57327d08895eebc76294c8c 391 Gene3D G3DSA:2.60.120.380 272 389 2.9E-18 T 13-10-2018 TREPR_3198 79d3bbcaa57327d08895eebc76294c8c 391 Gene3D G3DSA:2.60.120.380 43 152 6.3E-6 T 13-10-2018 TREPR_3198 79d3bbcaa57327d08895eebc76294c8c 391 Gene3D G3DSA:2.60.120.380 157 267 5.2E-22 T 13-10-2018 TREPR_3198 79d3bbcaa57327d08895eebc76294c8c 391 SUPERFAMILY SSF89260 274 387 2.09E-8 T 13-10-2018 TREPR_1694 91e89dfa787f076c61caa4ef034a24c2 331 Gene3D G3DSA:3.40.50.2300 142 316 2.3E-75 T 13-10-2018 TREPR_1694 91e89dfa787f076c61caa4ef034a24c2 331 Pfam PF04392 ABC transporter substrate binding protein 32 320 2.9E-76 T 13-10-2018 IPR007487 ABC transporter, substrate-binding protein TREPR_1694 91e89dfa787f076c61caa4ef034a24c2 331 Gene3D G3DSA:3.40.50.2300 43 294 2.3E-75 T 13-10-2018 TREPR_1694 91e89dfa787f076c61caa4ef034a24c2 331 SUPERFAMILY SSF53822 41 286 1.27E-10 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1560 2fc0eec6d76f6f605bfd2b02a7bdcb84 347 SUPERFAMILY SSF51726 56 315 6.02E-21 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1560 2fc0eec6d76f6f605bfd2b02a7bdcb84 347 Gene3D G3DSA:3.20.20.210 1 332 2.1E-40 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1560 2fc0eec6d76f6f605bfd2b02a7bdcb84 347 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 128 312 1.3E-13 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_2534 63ea8f61a3e57e01e3cf929c12a976a5 326 Gene3D G3DSA:3.90.550.10 1 240 5.3E-26 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2534 63ea8f61a3e57e01e3cf929c12a976a5 326 SUPERFAMILY SSF53448 4 297 1.13E-25 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2534 63ea8f61a3e57e01e3cf929c12a976a5 326 Pfam PF00535 Glycosyl transferase family 2 6 189 8.7E-18 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_1198 9f1729753beb62941dd2fc688f97e91f 159 SUPERFAMILY SSF50475 1 156 1.96E-49 T 13-10-2018 TREPR_1198 9f1729753beb62941dd2fc688f97e91f 159 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 10 155 6.3E-25 T 13-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related TREPR_1198 9f1729753beb62941dd2fc688f97e91f 159 Gene3D G3DSA:2.30.110.10 1 157 6.2E-49 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TREPR_3836 49e038d95a9a2af7bc3f0c2344cf960d 342 Gene3D G3DSA:3.30.390.50 251 335 1.8E-15 T 13-10-2018 TREPR_3836 49e038d95a9a2af7bc3f0c2344cf960d 342 SUPERFAMILY SSF55681 6 248 1.92E-68 T 13-10-2018 TREPR_3836 49e038d95a9a2af7bc3f0c2344cf960d 342 SUPERFAMILY SSF82649 249 336 1.1E-16 T 13-10-2018 TREPR_3836 49e038d95a9a2af7bc3f0c2344cf960d 342 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 310 3.6E-82 T 13-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 TREPR_3836 49e038d95a9a2af7bc3f0c2344cf960d 342 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 316 1.4E-12 T 13-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 TREPR_3836 49e038d95a9a2af7bc3f0c2344cf960d 342 Pfam PF03099 Biotin/lipoate A/B protein ligase family 50 155 7.6E-7 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TREPR_3836 49e038d95a9a2af7bc3f0c2344cf960d 342 Gene3D G3DSA:3.30.930.10 5 250 1.8E-72 T 13-10-2018 TREPR_0549 4fbce1ce94e9a208fee559f0f73b6a33 365 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 275 2.1E-20 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TREPR_0549 4fbce1ce94e9a208fee559f0f73b6a33 365 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 349 2.7E-39 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TREPR_0549 4fbce1ce94e9a208fee559f0f73b6a33 365 Gene3D G3DSA:1.10.287.470 104 162 2.6E-48 T 13-10-2018 TREPR_0549 4fbce1ce94e9a208fee559f0f73b6a33 365 Gene3D G3DSA:2.40.50.100 70 202 2.6E-48 T 13-10-2018 TREPR_0549 4fbce1ce94e9a208fee559f0f73b6a33 365 SUPERFAMILY SSF111369 63 278 6.8E-28 T 13-10-2018 TREPR_0549 4fbce1ce94e9a208fee559f0f73b6a33 365 Gene3D G3DSA:2.40.420.20 283 308 2.6E-48 T 13-10-2018 TREPR_0549 4fbce1ce94e9a208fee559f0f73b6a33 365 Gene3D G3DSA:2.40.30.170 61 282 2.6E-48 T 13-10-2018 TREPR_2616 0ca37cd10f4ec5e9a62e3cbde1f356eb 95 Pfam PF01381 Helix-turn-helix 36 73 5.3E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2616 0ca37cd10f4ec5e9a62e3cbde1f356eb 95 SMART SM00530 35 89 0.005 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_2616 0ca37cd10f4ec5e9a62e3cbde1f356eb 95 Gene3D G3DSA:1.10.260.40 35 95 9.9E-22 T 13-10-2018 TREPR_2616 0ca37cd10f4ec5e9a62e3cbde1f356eb 95 SUPERFAMILY SSF47413 36 83 3.58E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_2374 5824c92872f333023c705977a164d4f3 357 SUPERFAMILY SSF51735 10 335 4.74E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2374 5824c92872f333023c705977a164d4f3 357 Gene3D G3DSA:3.90.25.10 197 357 2.8E-57 T 13-10-2018 TREPR_2374 5824c92872f333023c705977a164d4f3 357 Pfam PF16363 GDP-mannose 4,6 dehydratase 21 252 3.1E-31 T 13-10-2018 IPR016040 NAD(P)-binding domain TREPR_2374 5824c92872f333023c705977a164d4f3 357 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 13 354 1.5E-133 T 13-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 TREPR_2374 5824c92872f333023c705977a164d4f3 357 Gene3D G3DSA:3.40.50.720 8 196 5.3E-47 T 13-10-2018 TREPR_1661 08276d65c98d191e74d03a15e0235731 155 Gene3D G3DSA:2.30.30.40 17 140 7.9E-13 T 13-10-2018 TREPR_1661 08276d65c98d191e74d03a15e0235731 155 SUPERFAMILY SSF50341 14 149 2.49E-16 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TREPR_1661 08276d65c98d191e74d03a15e0235731 155 Gene3D G3DSA:2.40.50.180 32 146 7.9E-13 T 13-10-2018 TREPR_1661 08276d65c98d191e74d03a15e0235731 155 SMART SM00260 11 146 3.5E-4 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_1661 08276d65c98d191e74d03a15e0235731 155 Pfam PF01584 CheW-like domain 16 148 7.5E-13 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TREPR_2407 49915c773a39e6cf81db4b9f88a3f859 567 Pfam PF14052 Capsule assembly protein Wzi 172 494 2.6E-9 T 13-10-2018 IPR026950 Capsule assembly protein Wzi TREPR_2407 49915c773a39e6cf81db4b9f88a3f859 567 Gene3D G3DSA:2.40.160.130 164 492 2.2E-6 T 13-10-2018 IPR038636 Capsule assembly protein Wzi superfamily TREPR_3154 291df7ebfbe93a3d3ac22c5b31f97753 77 Pfam PF13083 KH domain 3 75 2.3E-23 T 13-10-2018 TREPR_3154 291df7ebfbe93a3d3ac22c5b31f97753 77 Hamap MF_00088 UPF0109 protein . 2 76 22.416 T 13-10-2018 IPR020627 Uncharacterised protein family UPF0109 TREPR_3154 291df7ebfbe93a3d3ac22c5b31f97753 77 SUPERFAMILY SSF54814 4 62 1.24E-8 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TREPR_3154 291df7ebfbe93a3d3ac22c5b31f97753 77 Gene3D G3DSA:3.30.300.20 5 66 1.7E-5 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta TREPR_0504 d478ceb28d91bc7e4688a02e7ea9f6b0 72 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 10 72 6.9E-27 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TREPR_0504 d478ceb28d91bc7e4688a02e7ea9f6b0 72 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 19 71 4.0E-17 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TREPR_0504 d478ceb28d91bc7e4688a02e7ea9f6b0 72 SMART SM01234 4 71 1.5E-40 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TREPR_0504 d478ceb28d91bc7e4688a02e7ea9f6b0 72 Pfam PF01809 Haemolytic domain 6 71 1.1E-29 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TREPR_0504 d478ceb28d91bc7e4688a02e7ea9f6b0 72 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 4 72 24.091 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TREPR_0200 8314f9e990048fe68de4b45bac2398d9 385 Pfam PF13692 Glycosyl transferases group 1 208 325 3.8E-7 T 13-10-2018 TREPR_0200 8314f9e990048fe68de4b45bac2398d9 385 SUPERFAMILY SSF53756 3 316 2.28E-12 T 13-10-2018 TREPR_0200 8314f9e990048fe68de4b45bac2398d9 385 Gene3D G3DSA:3.40.50.2000 198 349 9.5E-6 T 13-10-2018 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 30.525 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 Pfam PF01245 Ribosomal protein L19 4 111 1.1E-46 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 PRINTS PR00061 Ribosomal protein L19 signature 87 112 9.9E-38 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 PRINTS PR00061 Ribosomal protein L19 signature 3 32 9.9E-38 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 PRINTS PR00061 Ribosomal protein L19 signature 33 62 9.9E-38 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 Gene3D G3DSA:2.30.30.790 8 117 1.7E-15 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 PIRSF PIRSF002191 1 133 2.8E-47 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 112 4.3E-47 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3157 b0a2180955e6a93db3069311a27d588e 139 SUPERFAMILY SSF50104 1 113 4.26E-44 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily TREPR_2079 66c3957514f83b1ca51996d791a7d5e2 5955 Pfam PF12245 Bacterial Ig-like domain (group 3) 2933 2954 0.77 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2079 66c3957514f83b1ca51996d791a7d5e2 5955 Pfam PF12245 Bacterial Ig-like domain (group 3) 1983 2012 2.1 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2079 66c3957514f83b1ca51996d791a7d5e2 5955 Gene3D G3DSA:2.60.40.10 4102 4210 1.1E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_2079 66c3957514f83b1ca51996d791a7d5e2 5955 Gene3D G3DSA:2.60.40.10 3875 3980 4.7E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 SUPERFAMILY SSF52009 478 595 4.84E-7 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 SUPERFAMILY SSF50800 73 178 1.92E-17 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 SUPERFAMILY SSF52935 335 486 3.53E-34 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 SUPERFAMILY SSF51621 4 353 1.33E-92 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 Gene3D G3DSA:3.20.20.60 5 346 1.2E-176 T 13-10-2018 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 PRINTS PR01050 Pyruvate kinase family signature 324 340 3.9E-72 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 PRINTS PR01050 Pyruvate kinase family signature 280 304 3.9E-72 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 PRINTS PR01050 Pyruvate kinase family signature 198 212 3.9E-72 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 PRINTS PR01050 Pyruvate kinase family signature 305 323 3.9E-72 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 PRINTS PR01050 Pyruvate kinase family signature 62 78 3.9E-72 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 PRINTS PR01050 Pyruvate kinase family signature 255 279 3.9E-72 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 PRINTS PR01050 Pyruvate kinase family signature 228 254 3.9E-72 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 485 1.4E-160 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 Pfam PF02887 Pyruvate kinase, alpha/beta domain 372 483 6.1E-29 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 Gene3D G3DSA:3.40.1380.20 347 481 1.2E-176 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 Pfam PF00224 Pyruvate kinase, barrel domain 5 354 7.8E-128 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 Gene3D G3DSA:2.40.33.10 73 180 1.2E-176 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TREPR_0649 8c00376a8f53bf594cedb14f65d5b8f5 597 Gene3D G3DSA:3.50.30.10 488 597 2.7E-8 T 13-10-2018 TREPR_0717 9510a91c46bd60d86f05d8f768e98873 214 Gene3D G3DSA:3.40.50.150 18 213 8.3E-43 T 13-10-2018 TREPR_0717 9510a91c46bd60d86f05d8f768e98873 214 Pfam PF01728 FtsJ-like methyltransferase 19 210 3.0E-40 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TREPR_0717 9510a91c46bd60d86f05d8f768e98873 214 PIRSF PIRSF005461 1 214 1.2E-53 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TREPR_0717 9510a91c46bd60d86f05d8f768e98873 214 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 3 212 23.946 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TREPR_0717 9510a91c46bd60d86f05d8f768e98873 214 SUPERFAMILY SSF53335 18 212 2.97E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3506 339858503789340940046a026e29695a 246 SUPERFAMILY SSF52540 6 239 3.33E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3506 339858503789340940046a026e29695a 246 Pfam PF00005 ABC transporter 23 170 3.3E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3506 339858503789340940046a026e29695a 246 Gene3D G3DSA:3.40.50.300 5 246 2.1E-75 T 13-10-2018 TREPR_3506 339858503789340940046a026e29695a 246 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3506 339858503789340940046a026e29695a 246 SMART SM00382 31 219 3.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1345 0ebd5aa23877e31496e905c714efce0d 75 Gene3D G3DSA:1.10.10.1510 5 73 1.2E-18 T 13-10-2018 TREPR_3462 3e3eca7388d55984f6a12391fd16338b 147 Pfam PF05168 HEPN domain 8 120 8.3E-18 T 13-10-2018 IPR007842 HEPN domain TREPR_3462 3e3eca7388d55984f6a12391fd16338b 147 Gene3D G3DSA:1.20.120.330 2 132 5.0E-23 T 13-10-2018 TREPR_3462 3e3eca7388d55984f6a12391fd16338b 147 SMART SM00748 10 117 0.0021 T 13-10-2018 IPR007842 HEPN domain TREPR_3462 3e3eca7388d55984f6a12391fd16338b 147 SUPERFAMILY SSF81593 9 119 2.51E-16 T 13-10-2018 TREPR_0242 ecefc72b1727607cbb1f1c283be206be 430 SUPERFAMILY SSF109604 232 360 2.7E-13 T 13-10-2018 TREPR_0242 ecefc72b1727607cbb1f1c283be206be 430 Gene3D G3DSA:1.10.3090.10 221 429 1.3E-10 T 13-10-2018 TREPR_0242 ecefc72b1727607cbb1f1c283be206be 430 Pfam PF01966 HD domain 272 356 3.9E-8 T 13-10-2018 IPR006674 HD domain TREPR_0242 ecefc72b1727607cbb1f1c283be206be 430 TIGRFAM TIGR00277 HDIG: HDIG domain 268 340 1.4E-7 T 13-10-2018 IPR006675 HDIG domain TREPR_3878 e4a84bebf2641941a95499f73cbf5504 466 PRINTS PR00762 Chloride channel signature 367 383 5.4E-25 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TREPR_3878 e4a84bebf2641941a95499f73cbf5504 466 PRINTS PR00762 Chloride channel signature 169 188 5.4E-25 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TREPR_3878 e4a84bebf2641941a95499f73cbf5504 466 PRINTS PR00762 Chloride channel signature 332 352 5.4E-25 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TREPR_3878 e4a84bebf2641941a95499f73cbf5504 466 PRINTS PR00762 Chloride channel signature 89 106 5.4E-25 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TREPR_3878 e4a84bebf2641941a95499f73cbf5504 466 PRINTS PR00762 Chloride channel signature 385 404 5.4E-25 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TREPR_3878 e4a84bebf2641941a95499f73cbf5504 466 SUPERFAMILY SSF81340 11 432 8.76E-98 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 TREPR_3878 e4a84bebf2641941a95499f73cbf5504 466 Pfam PF00654 Voltage gated chloride channel 77 417 9.6E-85 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 TREPR_3878 e4a84bebf2641941a95499f73cbf5504 466 Gene3D G3DSA:1.10.3080.10 18 438 2.8E-101 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 TREPR_0251 196e1d510299edef5a95fabb3e41d005 236 PIRSF PIRSF000857 2 235 3.3E-67 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 TREPR_0251 196e1d510299edef5a95fabb3e41d005 236 Gene3D G3DSA:3.40.50.620 1 235 4.7E-63 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_0251 196e1d510299edef5a95fabb3e41d005 236 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 19 205 4.8E-36 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 TREPR_0251 196e1d510299edef5a95fabb3e41d005 236 SUPERFAMILY SSF52402 4 193 1.41E-38 T 13-10-2018 TREPR_1340 6495c83a8aad3cad901aab364be65d64 274 Pfam PF12706 Beta-lactamase superfamily domain 48 235 4.9E-38 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_1340 6495c83a8aad3cad901aab364be65d64 274 SUPERFAMILY SSF56281 1 252 8.24E-41 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_1340 6495c83a8aad3cad901aab364be65d64 274 SMART SM00849 34 239 2.9E-8 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_1340 6495c83a8aad3cad901aab364be65d64 274 Gene3D G3DSA:3.60.15.10 1 273 9.9E-75 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_3261 708fae8f7055785bdfa51f2f7d62c528 333 Gene3D G3DSA:3.40.50.410 91 291 8.4E-45 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_3261 708fae8f7055785bdfa51f2f7d62c528 333 Pfam PF00092 von Willebrand factor type A domain 92 279 1.1E-19 T 13-10-2018 IPR002035 von Willebrand factor, type A TREPR_3261 708fae8f7055785bdfa51f2f7d62c528 333 SMART SM00327 90 272 2.1E-21 T 13-10-2018 IPR002035 von Willebrand factor, type A TREPR_3261 708fae8f7055785bdfa51f2f7d62c528 333 SUPERFAMILY SSF53300 89 281 1.23E-31 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_3845 39ce83b3fb0177e1e99ad47ab03630b4 422 Gene3D G3DSA:3.40.190.10 156 418 2.4E-51 T 13-10-2018 TREPR_3845 39ce83b3fb0177e1e99ad47ab03630b4 422 Gene3D G3DSA:3.40.190.10 51 384 2.4E-51 T 13-10-2018 TREPR_3845 39ce83b3fb0177e1e99ad47ab03630b4 422 SUPERFAMILY SSF53850 20 420 1.94E-50 T 13-10-2018 TREPR_3845 39ce83b3fb0177e1e99ad47ab03630b4 422 Pfam PF01547 Bacterial extracellular solute-binding protein 47 343 2.7E-26 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_3146 dfd576b330095c19f36fb2751fabbd7a 190 Pfam PF14278 Transcriptional regulator C-terminal region 92 167 3.4E-14 T 13-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type TREPR_3146 dfd576b330095c19f36fb2751fabbd7a 190 SUPERFAMILY SSF46689 10 71 4.24E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_3146 dfd576b330095c19f36fb2751fabbd7a 190 Gene3D G3DSA:1.10.357.10 7 190 8.1E-41 T 13-10-2018 TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 SUPERFAMILY SSF49265 724 899 1.55E-8 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 Pfam PF12733 Cadherin-like beta sandwich domain 916 1002 2.2E-5 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 SMART SM00060 524 606 0.79 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 SMART SM00060 619 700 7.7 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 SMART SM00060 437 510 0.68 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 SMART SM00060 715 795 67.0 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 SMART SM00060 812 899 7.7E-4 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 Gene3D G3DSA:2.60.40.10 517 614 2.0E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 Gene3D G3DSA:2.60.40.10 714 809 2.5E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_2787 fd9f35004848cbddb8c2b9e178b083eb 1104 Gene3D G3DSA:2.60.40.10 813 909 4.6E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_0882 a718f50192c411fff2940c3080fe21f9 173 Gene3D G3DSA:1.10.260.40 57 125 1.4E-7 T 13-10-2018 TREPR_0882 a718f50192c411fff2940c3080fe21f9 173 SUPERFAMILY SSF47413 59 124 2.52E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0882 a718f50192c411fff2940c3080fe21f9 173 Pfam PF01381 Helix-turn-helix 68 123 1.5E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_0882 a718f50192c411fff2940c3080fe21f9 173 SMART SM00530 67 123 8.7E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3445 f07d0579fa9de13e1162898e950ce9c7 251 SMART SM00563 55 170 3.7E-17 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TREPR_3445 f07d0579fa9de13e1162898e950ce9c7 251 Pfam PF01553 Acyltransferase 52 166 9.9E-15 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TREPR_3445 f07d0579fa9de13e1162898e950ce9c7 251 SUPERFAMILY SSF69593 21 230 1.26E-17 T 13-10-2018 TREPR_0622 7b3424f25f5694802efb43d460712019 192 SMART SM00506 27 167 9.3E-9 T 13-10-2018 IPR002589 Macro domain TREPR_0622 7b3424f25f5694802efb43d460712019 192 Pfam PF01661 Macro domain 44 156 1.1E-9 T 13-10-2018 IPR002589 Macro domain TREPR_0622 7b3424f25f5694802efb43d460712019 192 Gene3D G3DSA:3.40.220.10 1 180 6.7E-50 T 13-10-2018 TREPR_0622 7b3424f25f5694802efb43d460712019 192 SUPERFAMILY SSF52949 4 176 2.35E-29 T 13-10-2018 TREPR_3029 390acda6cc2cf20379cc4bf2d7478077 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 77 1.9E-10 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_3029 390acda6cc2cf20379cc4bf2d7478077 303 SUPERFAMILY SSF161098 96 283 4.58E-28 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3029 390acda6cc2cf20379cc4bf2d7478077 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 7.3E-28 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3029 390acda6cc2cf20379cc4bf2d7478077 303 Gene3D G3DSA:1.10.3720.10 90 298 2.2E-20 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0984 a7259fdeee6fe2d5c44738d70f5b619e 243 Pfam PF01925 Sulfite exporter TauE/SafE 12 239 2.1E-26 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TREPR_0308 6cbbc7251fef6a49b71990839a44fe5f 203 PIRSF PIRSF006091 1 200 2.1E-26 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 TREPR_0308 6cbbc7251fef6a49b71990839a44fe5f 203 Pfam PF04205 FMN-binding domain 100 188 4.4E-13 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TREPR_0308 6cbbc7251fef6a49b71990839a44fe5f 203 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 6 194 19.824 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 TREPR_0308 6cbbc7251fef6a49b71990839a44fe5f 203 SMART SM00900 99 192 4.5E-10 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TREPR_0253 d30cd5ee3567ca612a3b059fc4a69d0f 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 269 7.8E-11 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0253 d30cd5ee3567ca612a3b059fc4a69d0f 281 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 15 270 6.9E-113 T 13-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 TREPR_0253 d30cd5ee3567ca612a3b059fc4a69d0f 281 SUPERFAMILY SSF161098 12 264 4.45E-53 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0253 d30cd5ee3567ca612a3b059fc4a69d0f 281 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 269 2.3E-92 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TREPR_0253 d30cd5ee3567ca612a3b059fc4a69d0f 281 Gene3D G3DSA:1.10.3720.10 16 272 6.6E-60 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1688 8d659d1ce60eaf450246fea254b0913c 156 Gene3D G3DSA:3.40.390.30 14 147 1.9E-37 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 TREPR_1688 8d659d1ce60eaf450246fea254b0913c 156 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 3 150 20.208 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TREPR_1688 8d659d1ce60eaf450246fea254b0913c 156 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 145 3.3E-33 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TREPR_1688 8d659d1ce60eaf450246fea254b0913c 156 Pfam PF02130 Uncharacterized protein family UPF0054 23 145 5.4E-31 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TREPR_1688 8d659d1ce60eaf450246fea254b0913c 156 SUPERFAMILY SSF55486 15 146 2.93E-34 T 13-10-2018 TREPR_0331 dbb31f8067d5a269e5789175f5fbd8ec 356 Gene3D G3DSA:3.40.50.20 2 119 3.9E-7 T 13-10-2018 TREPR_0331 dbb31f8067d5a269e5789175f5fbd8ec 356 SUPERFAMILY SSF56059 107 310 6.28E-11 T 13-10-2018 TREPR_3709 88548e52404cc975e522b55800db210e 185 Pfam PF03358 NADPH-dependent FMN reductase 1 149 3.6E-16 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TREPR_3709 88548e52404cc975e522b55800db210e 185 SUPERFAMILY SSF52218 1 159 2.46E-23 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_3709 88548e52404cc975e522b55800db210e 185 Gene3D G3DSA:3.40.50.360 2 182 7.0E-26 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_2466 e3c6c10ee1ff1bcfef28c79eef43b6ce 455 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 55 441 3.2E-129 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TREPR_2466 e3c6c10ee1ff1bcfef28c79eef43b6ce 455 Pfam PF02601 Exonuclease VII, large subunit 170 386 7.0E-70 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 TREPR_2466 e3c6c10ee1ff1bcfef28c79eef43b6ce 455 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 51 443 26.219 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TREPR_2466 e3c6c10ee1ff1bcfef28c79eef43b6ce 455 Pfam PF13742 OB-fold nucleic acid binding domain 54 147 4.8E-29 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 TREPR_3053 16a312b64e99230f4fcfbfae59e1aaae 252 Pfam PF03744 6-carboxyhexanoate--CoA ligase 3 247 1.7E-86 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 TREPR_3053 16a312b64e99230f4fcfbfae59e1aaae 252 Hamap MF_00668 6-carboxyhexanoate--CoA ligase [bioW]. 2 248 47.575 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 TREPR_3053 16a312b64e99230f4fcfbfae59e1aaae 252 TIGRFAM TIGR01204 bioW: 6-carboxyhexanoate--CoA ligase 16 247 3.3E-68 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 TREPR_3053 16a312b64e99230f4fcfbfae59e1aaae 252 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 2 221 2.0E-36 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 TREPR_1121 83c7b6a0a5d9cd16a7dca19af117a28a 567 Pfam PF03321 GH3 auxin-responsive promoter 27 555 4.6E-134 T 13-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 TREPR_2495 b51125071a02ed64f592def7641e4823 522 Pfam PF01973 Protein of unknown function DUF115 180 362 7.9E-18 T 13-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TREPR_0196 df20d2a7e8e333f8058b06bcbe63b3eb 294 SUPERFAMILY SSF53448 1 276 2.25E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0196 df20d2a7e8e333f8058b06bcbe63b3eb 294 Gene3D G3DSA:3.90.550.10 1 189 6.2E-7 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1225 c64d7a6d38e06cbef5efff5be1fd8f40 142 Gene3D G3DSA:2.40.33.20 1 142 3.9E-34 T 13-10-2018 TREPR_1225 c64d7a6d38e06cbef5efff5be1fd8f40 142 SUPERFAMILY SSF50800 1 141 3.82E-40 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TREPR_1225 c64d7a6d38e06cbef5efff5be1fd8f40 142 Pfam PF03473 MOSC domain 36 139 2.1E-6 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 TREPR_0146 976287c8690426eef79f6231e7f68a6d 225 Gene3D G3DSA:3.40.630.30 15 193 1.4E-32 T 13-10-2018 TREPR_0146 976287c8690426eef79f6231e7f68a6d 225 Pfam PF13527 Acetyltransferase (GNAT) domain 68 148 7.8E-9 T 13-10-2018 TREPR_0146 976287c8690426eef79f6231e7f68a6d 225 SUPERFAMILY SSF55729 18 160 1.13E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_3874 5817c07a8e975cd987322c335382210a 563 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 369 1.5E-69 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TREPR_3874 5817c07a8e975cd987322c335382210a 563 Gene3D G3DSA:3.20.20.300 30 380 2.2E-93 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TREPR_3874 5817c07a8e975cd987322c335382210a 563 Gene3D G3DSA:3.40.50.1700 400 558 1.5E-6 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 TREPR_3874 5817c07a8e975cd987322c335382210a 563 SUPERFAMILY SSF51445 31 375 3.9E-84 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_3020 cabdf5736a8aecb8e9d53ae234801324 348 Gene3D G3DSA:3.20.20.210 1 345 3.7E-51 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_3020 cabdf5736a8aecb8e9d53ae234801324 348 SUPERFAMILY SSF51726 1 333 7.33E-33 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_3020 cabdf5736a8aecb8e9d53ae234801324 348 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 32 333 1.7E-24 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_2413 d061250dd7cd48a112e18974153f6c4d 288 Pfam PF03755 YicC-like family, N-terminal region 1 152 1.8E-35 T 13-10-2018 IPR013527 YicC-like, N-terminal TREPR_2413 d061250dd7cd48a112e18974153f6c4d 288 Pfam PF08340 Domain of unknown function (DUF1732) 205 288 2.3E-30 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 TREPR_2413 d061250dd7cd48a112e18974153f6c4d 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 1.8E-64 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 TREPR_2388 36e9624a62f734afbaaf9c2e9bdceeba 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 16 250 4.8E-78 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TREPR_2388 36e9624a62f734afbaaf9c2e9bdceeba 328 SUPERFAMILY SSF51735 6 322 7.56E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2388 36e9624a62f734afbaaf9c2e9bdceeba 328 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 13 323 46.21 T 13-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 TREPR_2388 36e9624a62f734afbaaf9c2e9bdceeba 328 Gene3D G3DSA:3.40.50.720 16 312 3.3E-100 T 13-10-2018 TREPR_2388 36e9624a62f734afbaaf9c2e9bdceeba 328 Gene3D G3DSA:3.90.25.10 178 319 3.3E-100 T 13-10-2018 TREPR_1677 04172103206c50d8e9e2aab9f4ac900b 86 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 82 4.0E-16 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 TREPR_1677 04172103206c50d8e9e2aab9f4ac900b 86 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 84 5.6E-16 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 TREPR_2142 14024b24ec067553bac2666874328209 403 Gene3D G3DSA:3.20.20.70 131 356 9.7E-16 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_2142 14024b24ec067553bac2666874328209 403 SUPERFAMILY SSF102114 137 363 1.24E-21 T 13-10-2018 TREPR_1177 68c085182d4fc5282043c82154cf198e 389 SUPERFAMILY SSF53448 3 315 1.39E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1177 68c085182d4fc5282043c82154cf198e 389 Pfam PF00483 Nucleotidyl transferase 6 316 6.5E-36 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TREPR_1177 68c085182d4fc5282043c82154cf198e 389 Gene3D G3DSA:3.90.550.10 4 383 3.7E-84 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1177 68c085182d4fc5282043c82154cf198e 389 SUPERFAMILY SSF159283 325 381 2.75E-5 T 13-10-2018 TREPR_2007 478014087c49c38a991a860247870266 6174 Pfam PF12245 Bacterial Ig-like domain (group 3) 3160 3183 0.056 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2007 478014087c49c38a991a860247870266 6174 Pfam PF12245 Bacterial Ig-like domain (group 3) 4541 4554 3.7 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2007 478014087c49c38a991a860247870266 6174 Pfam PF12245 Bacterial Ig-like domain (group 3) 2060 2087 0.98 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_3314 8aff4950d06e59a48daa29d4d4b22669 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 93 4.4E-36 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TREPR_3314 8aff4950d06e59a48daa29d4d4b22669 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 77 3.0E-20 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TREPR_3314 8aff4950d06e59a48daa29d4d4b22669 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 85 1.0E-30 T 13-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein TREPR_3314 8aff4950d06e59a48daa29d4d4b22669 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 96 25.633 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TREPR_3314 8aff4950d06e59a48daa29d4d4b22669 98 PIRSF PIRSF002736 1 96 1.5E-37 T 13-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 TREPR_0856 3e33dd47c72ae4ea6957d33e7f6cb98c 566 Pfam PF03321 GH3 auxin-responsive promoter 28 555 7.5E-129 T 13-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 TREPR_2561 c1f10a4af082e187ed9e5176605dfc11 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 138 4.4E-36 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TREPR_2561 c1f10a4af082e187ed9e5176605dfc11 138 PIRSF PIRSF002889 1 138 5.6E-24 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TREPR_2561 c1f10a4af082e187ed9e5176605dfc11 138 Pfam PF00460 Flagella basal body rod protein 17 40 6.4E-6 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TREPR_1169 b940c96462e2834fa16426f318e451cf 228 Pfam PF00849 RNA pseudouridylate synthase 18 168 2.2E-23 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1169 b940c96462e2834fa16426f318e451cf 228 SUPERFAMILY SSF55120 6 215 3.04E-40 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TREPR_1169 b940c96462e2834fa16426f318e451cf 228 Gene3D G3DSA:3.30.2350.10 5 214 4.3E-42 T 13-10-2018 TREPR_1989 2eb181c8574d9c99abb73763418a03f6 510 Pfam PF17239 Family of unknown function (DUF5312) 228 500 2.1E-13 T 13-10-2018 IPR035196 Protein of unknown function DUF5312 TREPR_3354 a4a75b39c19f41e095782cf626471da1 112 SUPERFAMILY SSF47413 5 71 1.66E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3354 a4a75b39c19f41e095782cf626471da1 112 Pfam PF01381 Helix-turn-helix 14 68 1.3E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3354 a4a75b39c19f41e095782cf626471da1 112 SMART SM00530 13 68 5.6E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3354 a4a75b39c19f41e095782cf626471da1 112 Gene3D G3DSA:1.10.260.40 1 75 3.9E-20 T 13-10-2018 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 PIRSF PIRSF000149 1 352 2.4E-119 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 169 331 4.0E-61 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 162 169 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 SUPERFAMILY SSF51735 1 177 5.59E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 243 260 9.6E-43 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 283 298 9.6E-43 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 186 202 9.6E-43 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 9.6E-43 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 158 176 9.6E-43 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 Gene3D G3DSA:3.40.50.720 2 348 9.1E-143 T 13-10-2018 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 Gene3D G3DSA:3.30.360.10 165 335 9.1E-143 T 13-10-2018 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 SUPERFAMILY SSF55347 163 331 1.75E-66 T 13-10-2018 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 110 4.1E-32 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 2 343 3.5E-125 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_2454 a39a134f9d7168597ef78c545337bd2a 352 SMART SM00846 1 164 1.6E-71 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TREPR_0767 dca163f7a2c49d7897bb4851363e10c0 253 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 23 251 6.5E-55 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TREPR_0767 dca163f7a2c49d7897bb4851363e10c0 253 Gene3D G3DSA:3.40.1390.30 8 239 3.6E-68 T 13-10-2018 TREPR_0767 dca163f7a2c49d7897bb4851363e10c0 253 SUPERFAMILY SSF102705 6 249 7.98E-56 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily TREPR_0767 dca163f7a2c49d7897bb4851363e10c0 253 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 26 239 3.8E-46 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TREPR_0767 dca163f7a2c49d7897bb4851363e10c0 253 Gene3D G3DSA:3.40.1390.30 99 224 3.6E-68 T 13-10-2018 TREPR_0681 de942dba77209884406978d0a5ef239e 688 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 543 684 1.5E-32 T 13-10-2018 IPR002178 PTS EIIA type-2 domain TREPR_0681 de942dba77209884406978d0a5ef239e 688 SUPERFAMILY SSF55804 541 684 4.32E-33 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_0681 de942dba77209884406978d0a5ef239e 688 Gene3D G3DSA:3.40.930.10 539 685 4.6E-40 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_0681 de942dba77209884406978d0a5ef239e 688 Pfam PF00999 Sodium/hydrogen exchanger family 16 406 2.0E-50 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TREPR_0681 de942dba77209884406978d0a5ef239e 688 Gene3D G3DSA:1.20.1530.20 7 414 9.9E-85 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily TREPR_0020 fbc67c39eb5f0d56dd3a5f52a16b1e00 331 SUPERFAMILY SSF53448 6 229 8.75E-59 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0020 fbc67c39eb5f0d56dd3a5f52a16b1e00 331 Gene3D G3DSA:3.90.550.10 1 256 7.0E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0020 fbc67c39eb5f0d56dd3a5f52a16b1e00 331 Pfam PF00535 Glycosyl transferase family 2 9 168 3.5E-34 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_0540 2a93dc069a121eeba41ef53b3d90d202 269 Gene3D G3DSA:3.40.50.300 1 249 5.6E-66 T 13-10-2018 TREPR_0540 2a93dc069a121eeba41ef53b3d90d202 269 SMART SM00382 26 215 2.5E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0540 2a93dc069a121eeba41ef53b3d90d202 269 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0540 2a93dc069a121eeba41ef53b3d90d202 269 SUPERFAMILY SSF52540 1 229 1.33E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0540 2a93dc069a121eeba41ef53b3d90d202 269 Pfam PF00005 ABC transporter 18 166 4.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1958 502b43fc79d82ed62d882ea6763386c2 333 SUPERFAMILY SSF52540 6 256 2.95E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1958 502b43fc79d82ed62d882ea6763386c2 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 322 1.8E-29 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1958 502b43fc79d82ed62d882ea6763386c2 333 Pfam PF00005 ABC transporter 27 185 5.6E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1958 502b43fc79d82ed62d882ea6763386c2 333 SMART SM00382 35 243 1.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1958 502b43fc79d82ed62d882ea6763386c2 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 302 6.5E-20 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1958 502b43fc79d82ed62d882ea6763386c2 333 Gene3D G3DSA:3.40.50.300 4 329 1.8E-101 T 13-10-2018 TREPR_1958 502b43fc79d82ed62d882ea6763386c2 333 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0122 a4302ac70ce22b45098103569bffce5a 653 Gene3D G3DSA:3.40.50.410 119 259 6.7E-20 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_0122 a4302ac70ce22b45098103569bffce5a 653 SMART SM00327 117 420 3.0E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A TREPR_0122 a4302ac70ce22b45098103569bffce5a 653 Pfam PF13519 von Willebrand factor type A domain 120 227 9.6E-10 T 13-10-2018 IPR002035 von Willebrand factor, type A TREPR_0122 a4302ac70ce22b45098103569bffce5a 653 Pfam PF13768 von Willebrand factor type A domain 368 410 0.0059 T 13-10-2018 IPR002035 von Willebrand factor, type A TREPR_0122 a4302ac70ce22b45098103569bffce5a 653 SUPERFAMILY SSF53300 115 424 3.22E-27 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_3187 fd74aa932f276b855f250d12009572f7 113 Pfam PF13411 MerR HTH family regulatory protein 4 69 1.1E-16 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TREPR_3187 fd74aa932f276b855f250d12009572f7 113 SUPERFAMILY SSF46955 4 101 1.42E-15 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily TREPR_3187 fd74aa932f276b855f250d12009572f7 113 Gene3D G3DSA:1.10.1660.10 1 74 7.3E-19 T 13-10-2018 TREPR_3187 fd74aa932f276b855f250d12009572f7 113 SMART SM00422 4 74 2.0E-4 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TREPR_1612 c03675b75be24ac7112d1612b9189060 333 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 18 332 7.0E-47 T 13-10-2018 IPR007184 Mannoside phosphorylase TREPR_1612 c03675b75be24ac7112d1612b9189060 333 PIRSF PIRSF016202 1 333 4.1E-78 T 13-10-2018 IPR007184 Mannoside phosphorylase TREPR_1612 c03675b75be24ac7112d1612b9189060 333 Gene3D G3DSA:2.115.10.20 1 333 4.5E-95 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily TREPR_1612 c03675b75be24ac7112d1612b9189060 333 SUPERFAMILY SSF75005 2 324 1.31E-63 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily TREPR_0582 3502200ccb7efeb9efde140e5818951a 242 Gene3D G3DSA:3.40.50.2300 2 122 1.1E-37 T 13-10-2018 TREPR_0582 3502200ccb7efeb9efde140e5818951a 242 Gene3D G3DSA:1.10.10.10 136 240 9.6E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0582 3502200ccb7efeb9efde140e5818951a 242 SUPERFAMILY SSF46894 142 236 1.33E-28 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_0582 3502200ccb7efeb9efde140e5818951a 242 Pfam PF00072 Response regulator receiver domain 4 112 9.9E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0582 3502200ccb7efeb9efde140e5818951a 242 SMART SM00448 2 112 2.8E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_0582 3502200ccb7efeb9efde140e5818951a 242 SMART SM00862 160 236 3.2E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TREPR_0582 3502200ccb7efeb9efde140e5818951a 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 236 1.5E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TREPR_0582 3502200ccb7efeb9efde140e5818951a 242 SUPERFAMILY SSF52172 3 173 6.88E-40 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2247 797410a0c74ade669a477063bd00fb49 463 Pfam PF03961 Flagellar Assembly Protein A 15 451 1.6E-82 T 13-10-2018 IPR005646 Flagellar assembly protein A TREPR_2125 ec82d3845fb39ebb1349cc192990b10d 138 SUPERFAMILY SSF55021 2 69 7.71E-16 T 13-10-2018 TREPR_2125 ec82d3845fb39ebb1349cc192990b10d 138 SUPERFAMILY SSF55021 71 136 3.05E-10 T 13-10-2018 TREPR_2125 ec82d3845fb39ebb1349cc192990b10d 138 Gene3D G3DSA:3.30.2130.10 1 137 1.3E-46 T 13-10-2018 TREPR_2125 ec82d3845fb39ebb1349cc192990b10d 138 Pfam PF01842 ACT domain 5 53 8.3E-7 T 13-10-2018 IPR002912 ACT domain TREPR_3545 63ed9bbf00ddc6cb78ffda97c44e075c 256 PIRSF PIRSF005647 2 256 3.8E-71 T 13-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type TREPR_3545 63ed9bbf00ddc6cb78ffda97c44e075c 256 Gene3D G3DSA:3.40.50.300 2 255 1.0E-53 T 13-10-2018 TREPR_3545 63ed9bbf00ddc6cb78ffda97c44e075c 256 SUPERFAMILY SSF52540 1 240 1.99E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3545 63ed9bbf00ddc6cb78ffda97c44e075c 256 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 233 8.8E-12 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_2431 2cc272cff416d58aa12ea3bddfd66330 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 311 4.7E-35 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2431 2cc272cff416d58aa12ea3bddfd66330 313 Gene3D G3DSA:1.10.3720.10 86 307 9.4E-21 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2431 2cc272cff416d58aa12ea3bddfd66330 313 SUPERFAMILY SSF161098 94 296 1.02E-16 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1976 cfb7afad02c01d4ecae17587fcdfeeda 621 Gene3D G3DSA:1.10.3720.10 328 608 2.0E-37 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1976 cfb7afad02c01d4ecae17587fcdfeeda 621 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 311 5.5E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1976 cfb7afad02c01d4ecae17587fcdfeeda 621 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 422 603 2.6E-11 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1976 cfb7afad02c01d4ecae17587fcdfeeda 621 Gene3D G3DSA:1.10.3720.10 29 316 1.7E-47 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1976 cfb7afad02c01d4ecae17587fcdfeeda 621 SUPERFAMILY SSF161098 331 608 1.12E-38 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1976 cfb7afad02c01d4ecae17587fcdfeeda 621 SUPERFAMILY SSF161098 31 310 7.76E-43 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0148 d208ce7cb0cf93409967ea57d63599f0 419 Gene3D G3DSA:3.40.309.10 223 376 5.3E-152 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TREPR_0148 d208ce7cb0cf93409967ea57d63599f0 419 PIRSF PIRSF000151 1 419 1.3E-161 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 TREPR_0148 d208ce7cb0cf93409967ea57d63599f0 419 Pfam PF00171 Aldehyde dehydrogenase family 6 277 1.5E-8 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TREPR_0148 d208ce7cb0cf93409967ea57d63599f0 419 Pfam PF00171 Aldehyde dehydrogenase family 319 381 2.5E-7 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TREPR_0148 d208ce7cb0cf93409967ea57d63599f0 419 SUPERFAMILY SSF53720 4 418 3.27E-106 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TREPR_0148 d208ce7cb0cf93409967ea57d63599f0 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 408 4.8E-135 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TREPR_0148 d208ce7cb0cf93409967ea57d63599f0 419 Gene3D G3DSA:3.40.605.10 11 415 5.3E-152 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TREPR_0148 d208ce7cb0cf93409967ea57d63599f0 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 418 38.113 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TREPR_0148 d208ce7cb0cf93409967ea57d63599f0 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TREPR_1619 97abc80d34e05d2e103f890a0603a9de 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 196 7.3E-46 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TREPR_1619 97abc80d34e05d2e103f890a0603a9de 197 Pfam PF01725 Ham1 family 3 194 3.2E-52 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TREPR_1619 97abc80d34e05d2e103f890a0603a9de 197 SUPERFAMILY SSF52972 1 196 4.97E-54 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TREPR_1619 97abc80d34e05d2e103f890a0603a9de 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 197 41.497 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 TREPR_1619 97abc80d34e05d2e103f890a0603a9de 197 Gene3D G3DSA:3.90.950.10 1 197 4.1E-63 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TREPR_1350 f716e39c575ac8d7850a3e7420dc00e5 578 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 1 573 27.235 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TREPR_1350 f716e39c575ac8d7850a3e7420dc00e5 578 Gene3D G3DSA:3.40.50.620 293 574 1.2E-109 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1350 f716e39c575ac8d7850a3e7420dc00e5 578 Gene3D G3DSA:3.60.110.10 1 264 1.8E-64 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TREPR_1350 f716e39c575ac8d7850a3e7420dc00e5 578 SUPERFAMILY SSF56317 1 240 2.35E-44 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TREPR_1350 f716e39c575ac8d7850a3e7420dc00e5 578 Pfam PF02540 NAD synthase 295 548 1.9E-72 T 13-10-2018 IPR022310 NAD/GMP synthase TREPR_1350 f716e39c575ac8d7850a3e7420dc00e5 578 TIGRFAM TIGR00552 nadE: NAD+ synthetase 300 551 2.0E-61 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 TREPR_1350 f716e39c575ac8d7850a3e7420dc00e5 578 SUPERFAMILY SSF52402 292 556 1.05E-73 T 13-10-2018 TREPR_1350 f716e39c575ac8d7850a3e7420dc00e5 578 PIRSF PIRSF006630 1 574 1.4E-170 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TREPR_1350 f716e39c575ac8d7850a3e7420dc00e5 578 Pfam PF00795 Carbon-nitrogen hydrolase 2 234 5.4E-13 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TREPR_3027 988b8e53644a2fa245dc5fe82f787119 540 Gene3D G3DSA:3.10.105.10 287 499 8.0E-44 T 13-10-2018 TREPR_3027 988b8e53644a2fa245dc5fe82f787119 540 SUPERFAMILY SSF53850 48 517 1.09E-111 T 13-10-2018 TREPR_3027 988b8e53644a2fa245dc5fe82f787119 540 PIRSF PIRSF002741 7 523 3.8E-80 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_3027 988b8e53644a2fa245dc5fe82f787119 540 Gene3D G3DSA:3.40.190.10 37 286 1.2E-62 T 13-10-2018 TREPR_3027 988b8e53644a2fa245dc5fe82f787119 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 448 1.2E-74 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_0847 ae6be87e3e2c22ca8761a50e5c47c1c3 197 Pfam PF07796 Protein of unknown function (DUF1638) 35 185 8.7E-19 T 13-10-2018 IPR012437 Domain of unknown function DUF1638 TREPR_0117 9bc06914bf7fb29bf4735a96e526b048 210 Hamap MF_00109 Shikimate kinase [aroK]. 11 195 19.317 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TREPR_0117 9bc06914bf7fb29bf4735a96e526b048 210 PRINTS PR01100 Shikimate kinase family signature 38 51 3.0E-6 T 13-10-2018 TREPR_0117 9bc06914bf7fb29bf4735a96e526b048 210 PRINTS PR01100 Shikimate kinase family signature 65 73 3.0E-6 T 13-10-2018 TREPR_0117 9bc06914bf7fb29bf4735a96e526b048 210 PRINTS PR01100 Shikimate kinase family signature 14 29 3.0E-6 T 13-10-2018 TREPR_0117 9bc06914bf7fb29bf4735a96e526b048 210 Pfam PF01202 Shikimate kinase 22 191 1.1E-23 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TREPR_0117 9bc06914bf7fb29bf4735a96e526b048 210 Gene3D G3DSA:3.40.50.300 13 197 6.6E-38 T 13-10-2018 TREPR_0117 9bc06914bf7fb29bf4735a96e526b048 210 SUPERFAMILY SSF52540 13 192 2.06E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1800 9909f0b19f65b1af85a161a108b68131 580 Pfam PF00501 AMP-binding enzyme 39 469 2.5E-76 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TREPR_1800 9909f0b19f65b1af85a161a108b68131 580 SUPERFAMILY SSF56801 10 567 6.02E-138 T 13-10-2018 TREPR_1800 9909f0b19f65b1af85a161a108b68131 580 ProSitePatterns PS00455 Putative AMP-binding domain signature. 219 230 - T 13-10-2018 IPR020845 AMP-binding, conserved site TREPR_1800 9909f0b19f65b1af85a161a108b68131 580 Gene3D G3DSA:3.30.300.310 465 570 2.0E-27 T 13-10-2018 TREPR_1800 9909f0b19f65b1af85a161a108b68131 580 Gene3D G3DSA:3.40.50.12780 1 463 2.2E-142 T 13-10-2018 TREPR_1800 9909f0b19f65b1af85a161a108b68131 580 Pfam PF13193 AMP-binding enzyme C-terminal domain 478 556 9.5E-22 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TREPR_2016 1d691b2af70adb94d57d194e786f3843 231 Pfam PF04586 Caudovirus prohead serine protease 64 202 1.8E-7 T 13-10-2018 IPR006433 Prohead protease TREPR_2712 97d29210673574380c8f888a53a3e485 423 SUPERFAMILY SSF56954 5 421 2.35E-67 T 13-10-2018 TREPR_2712 97d29210673574380c8f888a53a3e485 423 Gene3D G3DSA:1.20.1600.10 2 421 6.5E-71 T 13-10-2018 TREPR_2712 97d29210673574380c8f888a53a3e485 423 Pfam PF02321 Outer membrane efflux protein 240 420 2.8E-23 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TREPR_2712 97d29210673574380c8f888a53a3e485 423 Pfam PF02321 Outer membrane efflux protein 10 186 8.7E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TREPR_2386 e395fb068d76b008293b933c59949cf7 320 Pfam PF16363 GDP-mannose 4,6 dehydratase 14 311 2.1E-50 T 13-10-2018 IPR016040 NAD(P)-binding domain TREPR_2386 e395fb068d76b008293b933c59949cf7 320 Gene3D G3DSA:3.40.50.720 12 302 1.5E-104 T 13-10-2018 TREPR_2386 e395fb068d76b008293b933c59949cf7 320 Gene3D G3DSA:3.90.25.10 192 315 1.5E-104 T 13-10-2018 TREPR_2386 e395fb068d76b008293b933c59949cf7 320 SUPERFAMILY SSF51735 12 317 5.42E-84 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3123 7e9736e5d60ae344a76c1d9dde230677 406 Gene3D G3DSA:3.60.40.10 6 250 2.0E-28 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_3123 7e9736e5d60ae344a76c1d9dde230677 406 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 39 243 1.0E-11 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_3123 7e9736e5d60ae344a76c1d9dde230677 406 SUPERFAMILY SSF81606 16 244 1.83E-8 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_3871 08bbbb2acdb73ed1e31c622c92a6f484 107 Pfam PF01909 Nucleotidyltransferase domain 16 85 2.9E-9 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TREPR_3871 08bbbb2acdb73ed1e31c622c92a6f484 107 SUPERFAMILY SSF81301 4 107 5.84E-15 T 13-10-2018 TREPR_3871 08bbbb2acdb73ed1e31c622c92a6f484 107 Gene3D G3DSA:3.30.460.10 1 106 1.8E-16 T 13-10-2018 TREPR_0471 56afa08105baded386e30898e3573553 238 SUPERFAMILY SSF100950 1 236 2.45E-49 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_0471 56afa08105baded386e30898e3573553 238 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 113 131 - T 13-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 TREPR_0471 56afa08105baded386e30898e3573553 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 219 7.2E-16 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 TREPR_0471 56afa08105baded386e30898e3573553 238 Gene3D G3DSA:3.40.50.1360 1 238 7.4E-48 T 13-10-2018 TREPR_0255 c3dd0269044b4162bededa8ef91553a4 355 Pfam PF13531 Bacterial extracellular solute-binding protein 50 302 3.4E-41 T 13-10-2018 TREPR_0255 c3dd0269044b4162bededa8ef91553a4 355 SUPERFAMILY SSF53850 44 348 1.6E-81 T 13-10-2018 TREPR_0255 c3dd0269044b4162bededa8ef91553a4 355 Gene3D G3DSA:3.40.190.10 137 346 2.1E-125 T 13-10-2018 TREPR_0255 c3dd0269044b4162bededa8ef91553a4 355 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 43 348 2.9E-134 T 13-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 TREPR_0255 c3dd0269044b4162bededa8ef91553a4 355 Gene3D G3DSA:3.40.190.10 49 317 2.1E-125 T 13-10-2018 TREPR_1527 f2ea6e73a68a666925e6fae141e7ee24 597 SUPERFAMILY SSF161098 12 302 1.1E-42 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1527 f2ea6e73a68a666925e6fae141e7ee24 597 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 405 584 3.6E-11 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1527 f2ea6e73a68a666925e6fae141e7ee24 597 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 297 3.3E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1527 f2ea6e73a68a666925e6fae141e7ee24 597 Gene3D G3DSA:1.10.3720.10 315 582 1.6E-30 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1527 f2ea6e73a68a666925e6fae141e7ee24 597 Gene3D G3DSA:1.10.3720.10 15 303 6.7E-47 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1527 f2ea6e73a68a666925e6fae141e7ee24 597 SUPERFAMILY SSF161098 320 590 3.01E-33 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2698 6861aa8d2aa7cad141c40b37f299c27f 299 Pfam PF03773 Predicted permease 28 296 3.8E-35 T 13-10-2018 IPR005524 Predicted permease DUF318 TREPR_1355 ebb9b16c378bd0c4670cdd1582644b66 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 262 3.0E-42 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_1355 ebb9b16c378bd0c4670cdd1582644b66 277 SUPERFAMILY SSF53850 1 264 3.81E-46 T 13-10-2018 TREPR_1355 ebb9b16c378bd0c4670cdd1582644b66 277 Gene3D G3DSA:3.40.190.10 37 262 1.9E-57 T 13-10-2018 TREPR_1355 ebb9b16c378bd0c4670cdd1582644b66 277 Gene3D G3DSA:3.40.190.10 104 226 1.9E-57 T 13-10-2018 TREPR_1355 ebb9b16c378bd0c4670cdd1582644b66 277 SMART SM00062 35 265 9.4E-37 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 Pfam PF00574 Clp protease 19 197 9.0E-77 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 8 198 40.2 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 117 130 - T 13-10-2018 IPR033135 ClpP, histidine active site TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 Gene3D G3DSA:3.90.226.10 1 203 9.6E-77 T 13-10-2018 TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 PRINTS PR00127 Clp protease catalytic subunit P signature 64 84 6.3E-49 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 PRINTS PR00127 Clp protease catalytic subunit P signature 116 135 6.3E-49 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 PRINTS PR00127 Clp protease catalytic subunit P signature 173 192 6.3E-49 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 PRINTS PR00127 Clp protease catalytic subunit P signature 95 112 6.3E-49 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 PRINTS PR00127 Clp protease catalytic subunit P signature 24 39 6.3E-49 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 95 106 - T 13-10-2018 IPR018215 ClpP, Ser active site TREPR_2599 9f98225ce68e784fc45e20271db19e98 204 SUPERFAMILY SSF52096 15 198 7.96E-68 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TREPR_2822 94b0be87c8e2356e2f1d44b9a267a0b0 136 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 7 129 7.4E-11 T 13-10-2018 TREPR_1635 ac581766d12c90cd4630240db9766526 174 Gene3D G3DSA:3.20.19.10 1 165 1.2E-40 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TREPR_1635 ac581766d12c90cd4630240db9766526 174 Pfam PF00694 Aconitase C-terminal domain 55 111 1.1E-20 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TREPR_1635 ac581766d12c90cd4630240db9766526 174 SUPERFAMILY SSF52016 2 173 6.47E-39 T 13-10-2018 TREPR_1203 eac48ca07ced98a247a3e98b4eb668c1 152 SUPERFAMILY SSF46785 6 149 1.0E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_1203 eac48ca07ced98a247a3e98b4eb668c1 152 Pfam PF01047 MarR family 36 91 8.3E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TREPR_1203 eac48ca07ced98a247a3e98b4eb668c1 152 Gene3D G3DSA:1.10.10.10 1 145 6.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1203 eac48ca07ced98a247a3e98b4eb668c1 152 SMART SM00347 26 129 2.3E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TREPR_2108 b6aa7d08b8da73a5aee6cb5c5a787bce 171 Gene3D G3DSA:3.30.70.1290 1 156 2.6E-38 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TREPR_2108 b6aa7d08b8da73a5aee6cb5c5a787bce 171 SMART SM01321 8 122 3.3E-36 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TREPR_2108 b6aa7d08b8da73a5aee6cb5c5a787bce 171 SUPERFAMILY SSF143422 1 128 2.49E-31 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TREPR_2108 b6aa7d08b8da73a5aee6cb5c5a787bce 171 Pfam PF01797 Transposase IS200 like 12 122 6.9E-18 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TREPR_2793 d729f36c733d09af6112d3b957a87181 96 SMART SM00418 9 88 5.2E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2793 d729f36c733d09af6112d3b957a87181 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.5E-6 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2793 d729f36c733d09af6112d3b957a87181 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 1.5E-6 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2793 d729f36c733d09af6112d3b957a87181 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.5E-6 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2793 d729f36c733d09af6112d3b957a87181 96 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 1.5E-6 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2793 d729f36c733d09af6112d3b957a87181 96 Pfam PF01022 Bacterial regulatory protein, arsR family 16 63 2.4E-8 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TREPR_2793 d729f36c733d09af6112d3b957a87181 96 SUPERFAMILY SSF46785 5 86 3.01E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_2793 d729f36c733d09af6112d3b957a87181 96 Gene3D G3DSA:1.10.10.10 2 93 1.8E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0135 ff198f389456201d834398553b74747e 177 Gene3D G3DSA:3.40.109.10 2 173 7.3E-34 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_0135 ff198f389456201d834398553b74747e 177 Pfam PF00881 Nitroreductase family 10 156 3.3E-20 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_0135 ff198f389456201d834398553b74747e 177 SUPERFAMILY SSF55469 4 165 8.38E-34 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_3418 d0b2152e197c74f13f12aaeaf82215b3 111 Pfam PF01381 Helix-turn-helix 54 90 2.1E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3418 d0b2152e197c74f13f12aaeaf82215b3 111 SUPERFAMILY SSF47413 52 96 1.15E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3418 d0b2152e197c74f13f12aaeaf82215b3 111 Gene3D G3DSA:1.10.260.40 6 108 3.7E-16 T 13-10-2018 TREPR_3418 d0b2152e197c74f13f12aaeaf82215b3 111 SMART SM00530 51 105 2.9E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_1708 5106a1b05b9ea88595de3d8f8fff9086 436 Pfam PF13416 Bacterial extracellular solute-binding protein 40 349 1.5E-28 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_1708 5106a1b05b9ea88595de3d8f8fff9086 436 Gene3D G3DSA:3.40.190.10 16 418 2.9E-43 T 13-10-2018 TREPR_1708 5106a1b05b9ea88595de3d8f8fff9086 436 SUPERFAMILY SSF53850 19 404 2.05E-34 T 13-10-2018 TREPR_2154 eb80e36d9790a0d5075b882e5d9c4ac9 77 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 42 8.9E-13 T 13-10-2018 IPR022453 Zinc finger, MqsA-type TREPR_2200 2e5cafa0abb65f82f21a01532b5e3479 526 Gene3D G3DSA:3.40.50.300 1 295 4.1E-26 T 13-10-2018 TREPR_2200 2e5cafa0abb65f82f21a01532b5e3479 526 SUPERFAMILY SSF52540 1 287 1.05E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2200 2e5cafa0abb65f82f21a01532b5e3479 526 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 28 281 3.3E-20 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TREPR_3091 3066851cc4b48432c84af13649b3f26b 265 SUPERFAMILY SSF53067 7 261 3.98E-31 T 13-10-2018 TREPR_3091 3066851cc4b48432c84af13649b3f26b 265 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 7 262 7.3E-68 T 13-10-2018 IPR008275 CoA enzyme activase TREPR_3091 3066851cc4b48432c84af13649b3f26b 265 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 9 262 8.4E-56 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 TREPR_3091 3066851cc4b48432c84af13649b3f26b 265 Gene3D G3DSA:3.30.420.40 9 262 5.5E-70 T 13-10-2018 TREPR_3091 3066851cc4b48432c84af13649b3f26b 265 Gene3D G3DSA:3.30.420.40 108 246 5.5E-70 T 13-10-2018 TREPR_1936 ab9878e0063bc78def428ae7f2c787ef 285 SUPERFAMILY SSF143597 42 238 1.26E-56 T 13-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily TREPR_1936 ab9878e0063bc78def428ae7f2c787ef 285 PIRSF PIRSF004793 5 266 1.2E-80 T 13-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 TREPR_1936 ab9878e0063bc78def428ae7f2c787ef 285 Gene3D G3DSA:3.40.1700.10 104 252 6.0E-53 T 13-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily TREPR_1936 ab9878e0063bc78def428ae7f2c787ef 285 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 10 247 6.5E-68 T 13-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 TREPR_1936 ab9878e0063bc78def428ae7f2c787ef 285 Hamap MF_01499 Diadenylate cyclase [dacA]. 3 252 30.795 T 13-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 TREPR_1936 ab9878e0063bc78def428ae7f2c787ef 285 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 116 234 4.1E-40 T 13-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal TREPR_3844 7b20121690a0d2aa4578df19c67cb3b9 303 Gene3D G3DSA:1.10.3720.10 51 300 5.7E-49 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3844 7b20121690a0d2aa4578df19c67cb3b9 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 293 5.6E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3844 7b20121690a0d2aa4578df19c67cb3b9 303 SUPERFAMILY SSF161098 55 289 1.7E-41 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2704 e689f7da47e535fa2736fc5086bb8c9e 223 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2704 e689f7da47e535fa2736fc5086bb8c9e 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 6.8E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TREPR_2704 e689f7da47e535fa2736fc5086bb8c9e 223 Gene3D G3DSA:3.40.50.2300 1 128 6.5E-29 T 13-10-2018 TREPR_2704 e689f7da47e535fa2736fc5086bb8c9e 223 Gene3D G3DSA:1.10.10.10 129 223 3.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2704 e689f7da47e535fa2736fc5086bb8c9e 223 SMART SM00448 2 113 4.0E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2704 e689f7da47e535fa2736fc5086bb8c9e 223 SMART SM00862 146 220 5.9E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TREPR_2704 e689f7da47e535fa2736fc5086bb8c9e 223 SUPERFAMILY SSF52172 1 174 6.26E-35 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 373 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 439 6.2E-29 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 TIGRFAM TIGR01312 XylB: xylulokinase 7 487 5.7E-160 T 13-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 SUPERFAMILY SSF53067 5 250 2.21E-59 T 13-10-2018 TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 Gene3D G3DSA:3.30.420.40 1 249 1.7E-67 T 13-10-2018 TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 248 6.0E-60 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 SUPERFAMILY SSF53067 250 493 3.46E-48 T 13-10-2018 TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 PIRSF PIRSF000538 2 495 1.7E-110 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TREPR_2498 cdb75aa3cdf2c4b7ee4a9b4616320637 496 Gene3D G3DSA:3.30.420.40 252 490 1.2E-65 T 13-10-2018 TREPR_1306 002a5c631193eb1d009d06103d04f60b 279 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 9 277 7.8E-95 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 TREPR_1306 002a5c631193eb1d009d06103d04f60b 279 Pfam PF05681 Fumarate hydratase (Fumerase) 12 276 3.4E-109 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 TREPR_0610 5ca849ad2a36ad074160db9fa6b07bac 74 SUPERFAMILY SSF117916 3 74 7.52E-25 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TREPR_0610 5ca849ad2a36ad074160db9fa6b07bac 74 Gene3D G3DSA:3.30.300.130 1 74 1.5E-29 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TREPR_0610 5ca849ad2a36ad074160db9fa6b07bac 74 Pfam PF01106 NifU-like domain 6 72 3.0E-28 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TREPR_0610 5ca849ad2a36ad074160db9fa6b07bac 74 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 10 72 4.0E-19 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TREPR_2310 12ad6c1d562038114a48be4798e3d6af 299 Pfam PF14257 Domain of unknown function (DUF4349) 17 265 3.2E-53 T 13-10-2018 IPR025645 Domain of unknown function DUF4349 TREPR_1122 5d199c3ca5bc19b492168a851021c124 396 Pfam PF13458 Periplasmic binding protein 46 374 1.5E-64 T 13-10-2018 IPR028081 Leucine-binding protein domain TREPR_1122 5d199c3ca5bc19b492168a851021c124 396 SUPERFAMILY SSF53822 46 388 4.71E-87 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1122 5d199c3ca5bc19b492168a851021c124 396 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 84 2.2E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TREPR_1122 5d199c3ca5bc19b492168a851021c124 396 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 2.2E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TREPR_1122 5d199c3ca5bc19b492168a851021c124 396 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 349 364 2.2E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TREPR_1122 5d199c3ca5bc19b492168a851021c124 396 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 109 119 2.2E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TREPR_1122 5d199c3ca5bc19b492168a851021c124 396 Gene3D G3DSA:3.40.50.2300 48 365 1.5E-101 T 13-10-2018 TREPR_1122 5d199c3ca5bc19b492168a851021c124 396 Gene3D G3DSA:3.40.50.2300 164 291 1.5E-101 T 13-10-2018 TREPR_0794 19723b7aaa5aafd41b9e8662afd9b2d3 347 Pfam PF02470 MlaD protein 41 114 2.2E-11 T 13-10-2018 IPR003399 Mce/MlaD TREPR_2401 dd06b81cfa4a017c26bf897de3d6b720 322 Pfam PF00534 Glycosyl transferases group 1 140 292 1.3E-21 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_2401 dd06b81cfa4a017c26bf897de3d6b720 322 Gene3D G3DSA:3.40.50.2000 141 296 1.5E-28 T 13-10-2018 TREPR_2401 dd06b81cfa4a017c26bf897de3d6b720 322 Gene3D G3DSA:3.40.50.2000 32 140 5.5E-6 T 13-10-2018 TREPR_2401 dd06b81cfa4a017c26bf897de3d6b720 322 SUPERFAMILY SSF53756 60 294 1.47E-43 T 13-10-2018 TREPR_0333 fa82c79efb4fe1eade5f126035cc7b9c 291 Gene3D G3DSA:3.40.50.720 1 285 5.5E-47 T 13-10-2018 TREPR_0333 fa82c79efb4fe1eade5f126035cc7b9c 291 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 224 1.5E-26 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TREPR_0333 fa82c79efb4fe1eade5f126035cc7b9c 291 SUPERFAMILY SSF51735 1 290 3.24E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1537 5a3001aeef073adc7572f9aa2f6c7fb2 366 Gene3D G3DSA:1.25.40.10 71 246 1.4E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1537 5a3001aeef073adc7572f9aa2f6c7fb2 366 SUPERFAMILY SSF48452 76 217 2.84E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2700 4d539d2bce9f103c1c4094e60e60dc8c 352 SUPERFAMILY SSF53300 219 324 1.94E-5 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_2700 4d539d2bce9f103c1c4094e60e60dc8c 352 Pfam PF09967 VWA-like domain (DUF2201) 222 336 5.8E-12 T 13-10-2018 IPR018698 VWA-like domain TREPR_1686 0fde53512a796570fc156bb07839970e 352 Gene3D G3DSA:3.40.50.300 141 346 3.6E-68 T 13-10-2018 TREPR_1686 0fde53512a796570fc156bb07839970e 352 Pfam PF02562 PhoH-like protein 143 346 1.1E-83 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 TREPR_1686 0fde53512a796570fc156bb07839970e 352 SUPERFAMILY SSF52540 142 312 2.52E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3016 69ff0ad755bc3489686363e1b0c84cf9 222 Gene3D G3DSA:2.60.450.10 21 141 4.7E-7 T 13-10-2018 TREPR_3016 69ff0ad755bc3489686363e1b0c84cf9 222 Pfam PF13100 OstA-like protein 27 161 8.6E-9 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal TREPR_1682 fc09afc741038d8a22fd7f89e2c8a1ab 310 Gene3D G3DSA:1.25.40.920 40 307 3.6E-88 T 13-10-2018 IPR038537 TatT superfamily TREPR_1682 fc09afc741038d8a22fd7f89e2c8a1ab 310 Pfam PF16811 TRAP transporter T-component 47 305 1.5E-100 T 13-10-2018 IPR031823 TRAP transporter T-component TREPR_2847 4107043f8c86a6ac9ec122fac80becbc 295 Gene3D G3DSA:3.40.50.300 32 273 2.1E-54 T 13-10-2018 TREPR_2847 4107043f8c86a6ac9ec122fac80becbc 295 SUPERFAMILY SSF52540 32 275 1.56E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2847 4107043f8c86a6ac9ec122fac80becbc 295 PIRSF PIRSF003092 1 295 1.3E-83 T 13-10-2018 IPR025501 ATP binding protein MinD TREPR_2847 4107043f8c86a6ac9ec122fac80becbc 295 Pfam PF13614 AAA domain 33 199 3.4E-19 T 13-10-2018 IPR025669 AAA domain TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 Pfam PF00005 ABC transporter 27 196 5.6E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 SUPERFAMILY SSF52540 316 542 1.55E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 SMART SM00382 36 241 5.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 SMART SM00382 353 529 1.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 Gene3D G3DSA:3.40.50.300 8 290 9.1E-77 T 13-10-2018 TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 9 563 1.4E-271 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 ProSitePatterns PS00211 ABC transporters family signature. 456 470 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 Pfam PF00005 ABC transporter 345 484 7.8E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 SUPERFAMILY SSF52540 14 241 5.33E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 Gene3D G3DSA:3.40.50.300 291 563 4.4E-64 T 13-10-2018 TREPR_3805 8eece1845b16a774cd80b94ee5a6b359 565 Pfam PF12848 ABC transporter 235 306 2.9E-10 T 13-10-2018 IPR032781 ABC-transporter extension domain TREPR_1133 f80638dc3b570032e2a2fabe1f686cfc 677 SUPERFAMILY SSF56935 17 677 2.42E-77 T 13-10-2018 TREPR_1133 f80638dc3b570032e2a2fabe1f686cfc 677 Gene3D G3DSA:2.40.170.20 150 677 2.5E-39 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TREPR_1133 f80638dc3b570032e2a2fabe1f686cfc 677 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 139 1.3E-19 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain TREPR_1133 f80638dc3b570032e2a2fabe1f686cfc 677 Gene3D G3DSA:2.170.130.10 39 149 7.3E-22 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TREPR_1133 f80638dc3b570032e2a2fabe1f686cfc 677 Pfam PF00593 TonB dependent receptor 248 675 1.1E-23 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TREPR_0567 1e5e46002cea24f21529cedc4835c5cc 392 Gene3D G3DSA:3.40.50.300 6 223 2.2E-68 T 13-10-2018 TREPR_0567 1e5e46002cea24f21529cedc4835c5cc 392 Gene3D G3DSA:2.40.50.140 294 311 2.1E-9 T 13-10-2018 TREPR_0567 1e5e46002cea24f21529cedc4835c5cc 392 Pfam PF00005 ABC transporter 21 163 3.5E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0567 1e5e46002cea24f21529cedc4835c5cc 392 SUPERFAMILY SSF50331 238 331 6.23E-10 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TREPR_0567 1e5e46002cea24f21529cedc4835c5cc 392 SUPERFAMILY SSF52540 6 242 1.27E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0567 1e5e46002cea24f21529cedc4835c5cc 392 Gene3D G3DSA:2.40.50.940 224 293 2.1E-9 T 13-10-2018 TREPR_0567 1e5e46002cea24f21529cedc4835c5cc 392 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 334 2.4E-111 T 13-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 TREPR_0567 1e5e46002cea24f21529cedc4835c5cc 392 SMART SM00382 30 213 9.8E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0567 1e5e46002cea24f21529cedc4835c5cc 392 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3183 93def73f1eafabab60e2fa6b2b6c68ea 325 Gene3D G3DSA:3.40.50.1980 51 214 6.1E-27 T 13-10-2018 TREPR_3183 93def73f1eafabab60e2fa6b2b6c68ea 325 SUPERFAMILY SSF53807 50 320 4.17E-55 T 13-10-2018 TREPR_3183 93def73f1eafabab60e2fa6b2b6c68ea 325 Gene3D G3DSA:3.40.50.1980 219 322 7.7E-28 T 13-10-2018 TREPR_3183 93def73f1eafabab60e2fa6b2b6c68ea 325 Pfam PF01297 Zinc-uptake complex component A periplasmic 54 301 1.6E-38 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TREPR_0468 9fa4ce1d39d12faa990404010e702ef8 412 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 406 2.2E-76 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 TREPR_0468 9fa4ce1d39d12faa990404010e702ef8 412 PIRSF PIRSF006351 2 412 1.7E-96 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 TREPR_0468 9fa4ce1d39d12faa990404010e702ef8 412 Pfam PF02378 Phosphotransferase system, EIIC 30 333 7.3E-37 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 TREPR_1020 f57ac0e2368e87b3798535613793fecc 85 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 1 79 8.0E-20 T 13-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 TREPR_1262 87c20fe1cf496bd7589d91ee00d47801 416 Pfam PF07804 HipA-like C-terminal domain 180 392 6.0E-47 T 13-10-2018 IPR012893 HipA-like, C-terminal TREPR_3661 7b4ede5392b295da7a004a8bf285a63f 313 SUPERFAMILY SSF161098 93 294 2.4E-17 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3661 7b4ede5392b295da7a004a8bf285a63f 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 305 8.4E-40 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3661 7b4ede5392b295da7a004a8bf285a63f 313 Gene3D G3DSA:1.10.3720.10 88 303 8.8E-19 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2757 545bff4486a8c1814c0ffcde3104d092 319 SUPERFAMILY SSF110997 247 317 1.01E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TREPR_2757 545bff4486a8c1814c0ffcde3104d092 319 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 13 175 22.46 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 TREPR_2757 545bff4486a8c1814c0ffcde3104d092 319 Gene3D G3DSA:2.40.40.10 82 174 1.7E-36 T 13-10-2018 IPR036908 RlpA-like domain superfamily TREPR_2757 545bff4486a8c1814c0ffcde3104d092 319 Pfam PF03330 Lytic transglycolase 83 170 2.2E-24 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain TREPR_2757 545bff4486a8c1814c0ffcde3104d092 319 SUPERFAMILY SSF50685 71 170 1.74E-13 T 13-10-2018 IPR036908 RlpA-like domain superfamily TREPR_2757 545bff4486a8c1814c0ffcde3104d092 319 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 85 173 2.9E-39 T 13-10-2018 IPR012997 Rare lipoprotein A TREPR_2989 745f1efec90903bd486417191ac62680 434 Pfam PF13416 Bacterial extracellular solute-binding protein 58 337 5.5E-32 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_2989 745f1efec90903bd486417191ac62680 434 Gene3D G3DSA:3.40.190.10 153 422 3.0E-68 T 13-10-2018 TREPR_2989 745f1efec90903bd486417191ac62680 434 SUPERFAMILY SSF53850 35 433 2.12E-58 T 13-10-2018 TREPR_2989 745f1efec90903bd486417191ac62680 434 Gene3D G3DSA:3.40.190.10 58 362 3.0E-68 T 13-10-2018 TREPR_2426 adf74254f404e1a19f54b0c959248f5a 341 Pfam PF05343 M42 glutamyl aminopeptidase 44 331 1.6E-80 T 13-10-2018 IPR008007 Peptidase M42 TREPR_2426 adf74254f404e1a19f54b0c959248f5a 341 PIRSF PIRSF001123 1 341 2.0E-97 T 13-10-2018 IPR008007 Peptidase M42 TREPR_2426 adf74254f404e1a19f54b0c959248f5a 341 SUPERFAMILY SSF101821 70 175 9.01E-24 T 13-10-2018 TREPR_2426 adf74254f404e1a19f54b0c959248f5a 341 Gene3D G3DSA:3.40.630.10 6 331 2.3E-105 T 13-10-2018 TREPR_2426 adf74254f404e1a19f54b0c959248f5a 341 SUPERFAMILY SSF53187 3 340 4.11E-56 T 13-10-2018 TREPR_2426 adf74254f404e1a19f54b0c959248f5a 341 Gene3D G3DSA:2.40.30.40 69 158 2.3E-105 T 13-10-2018 IPR023367 Peptidase M42, domain 2 TREPR_1330 8e587685bc46c06323c5ee9616d27008 538 Pfam PF00245 Alkaline phosphatase 94 362 1.6E-51 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TREPR_1330 8e587685bc46c06323c5ee9616d27008 538 SMART SM00098 38 538 1.0E-15 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TREPR_1330 8e587685bc46c06323c5ee9616d27008 538 SUPERFAMILY SSF53649 34 533 1.31E-94 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TREPR_1330 8e587685bc46c06323c5ee9616d27008 538 ProSitePatterns PS00123 Alkaline phosphatase active site. 116 124 - T 13-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TREPR_1330 8e587685bc46c06323c5ee9616d27008 538 PRINTS PR00113 Alkaline phosphatase signature 37 57 6.1E-7 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TREPR_1330 8e587685bc46c06323c5ee9616d27008 538 PRINTS PR00113 Alkaline phosphatase signature 198 208 6.1E-7 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TREPR_1330 8e587685bc46c06323c5ee9616d27008 538 PRINTS PR00113 Alkaline phosphatase signature 272 301 6.1E-7 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 TREPR_1127 efb30a5d5f8a488c453519ddd8ab127e 214 SMART SM00116 10 58 1.1E-11 T 13-10-2018 IPR000644 CBS domain TREPR_1127 efb30a5d5f8a488c453519ddd8ab127e 214 SMART SM00116 85 132 8.7E-9 T 13-10-2018 IPR000644 CBS domain TREPR_1127 efb30a5d5f8a488c453519ddd8ab127e 214 SUPERFAMILY SSF54631 1 133 1.18E-33 T 13-10-2018 TREPR_1127 efb30a5d5f8a488c453519ddd8ab127e 214 Pfam PF00571 CBS domain 78 130 1.5E-11 T 13-10-2018 IPR000644 CBS domain TREPR_1127 efb30a5d5f8a488c453519ddd8ab127e 214 Pfam PF00571 CBS domain 5 56 1.0E-15 T 13-10-2018 IPR000644 CBS domain TREPR_1127 efb30a5d5f8a488c453519ddd8ab127e 214 Gene3D G3DSA:3.10.580.10 1 149 7.6E-41 T 13-10-2018 TREPR_3765 d82bfaa50deb214c80818a8b8b1da96e 142 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 113 124 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3765 d82bfaa50deb214c80818a8b8b1da96e 142 SUPERFAMILY SSF54862 5 134 2.97E-26 T 13-10-2018 TREPR_3765 d82bfaa50deb214c80818a8b8b1da96e 142 Gene3D G3DSA:3.30.70.20 71 110 1.7E-9 T 13-10-2018 TREPR_3765 d82bfaa50deb214c80818a8b8b1da96e 142 Pfam PF00037 4Fe-4S binding domain 110 128 2.9E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3765 d82bfaa50deb214c80818a8b8b1da96e 142 Gene3D G3DSA:3.30.70.20 1 70 2.1E-6 T 13-10-2018 TREPR_3765 d82bfaa50deb214c80818a8b8b1da96e 142 Gene3D G3DSA:3.30.70.20 111 142 8.5E-7 T 13-10-2018 TREPR_3765 d82bfaa50deb214c80818a8b8b1da96e 142 Pfam PF13187 4Fe-4S dicluster domain 56 99 8.8E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3867 7dda961f8d296458b2fa5305977b9e4e 224 Gene3D G3DSA:3.60.10.10 1 222 1.1E-17 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_3867 7dda961f8d296458b2fa5305977b9e4e 224 SUPERFAMILY SSF56219 1 223 6.15E-19 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TREPR_2146 8d472f7ae32914c60d90fe09fb15b708 195 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 186 1.0E-31 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TREPR_2146 8d472f7ae32914c60d90fe09fb15b708 195 Gene3D G3DSA:3.40.920.10 1 195 3.8E-40 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TREPR_2146 8d472f7ae32914c60d90fe09fb15b708 195 SUPERFAMILY SSF53323 2 191 5.62E-38 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TREPR_2559 ae304a8e9fb8e3edb0ae6bb79762d0fb 132 Pfam PF02049 Flagellar hook-basal body complex protein FliE 59 131 1.4E-11 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TREPR_2559 ae304a8e9fb8e3edb0ae6bb79762d0fb 132 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 97 113 5.3E-7 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TREPR_2559 ae304a8e9fb8e3edb0ae6bb79762d0fb 132 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 118 131 5.3E-7 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TREPR_2559 ae304a8e9fb8e3edb0ae6bb79762d0fb 132 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 62 78 5.3E-7 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TREPR_2559 ae304a8e9fb8e3edb0ae6bb79762d0fb 132 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 60 132 1.2E-14 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TREPR_1287 44e4292c01b57b89f6ffd144bee63d86 291 Gene3D G3DSA:3.20.20.60 1 287 1.3E-96 T 13-10-2018 TREPR_1287 44e4292c01b57b89f6ffd144bee63d86 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 3 221 1.4E-56 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TREPR_1287 44e4292c01b57b89f6ffd144bee63d86 291 PIRSF PIRSF015582 1 291 2.0E-83 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like TREPR_1287 44e4292c01b57b89f6ffd144bee63d86 291 SUPERFAMILY SSF51621 2 232 1.74E-63 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_0558 4b52a3541c909409f5d5c926b1b5633c 255 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 85 242 1.8E-17 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain TREPR_0558 4b52a3541c909409f5d5c926b1b5633c 255 SUPERFAMILY SSF52266 55 253 8.16E-38 T 13-10-2018 TREPR_0558 4b52a3541c909409f5d5c926b1b5633c 255 Gene3D G3DSA:3.40.50.1110 63 255 4.0E-37 T 13-10-2018 IPR036514 SGNH hydrolase superfamily TREPR_1550 4ad1d47fcf734e466343776c445af605 505 Pfam PF13556 PucR C-terminal helix-turn-helix domain 441 498 3.4E-11 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain TREPR_1550 4ad1d47fcf734e466343776c445af605 505 Gene3D G3DSA:1.10.10.2840 371 503 4.0E-9 T 13-10-2018 TREPR_3434 29d511b3ec4a95735cacab958636eacd 165 Pfam PF00877 NlpC/P60 family 55 160 4.1E-27 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain TREPR_3434 29d511b3ec4a95735cacab958636eacd 165 Gene3D G3DSA:3.90.1720.10 39 165 1.9E-38 T 13-10-2018 TREPR_3434 29d511b3ec4a95735cacab958636eacd 165 SUPERFAMILY SSF54001 40 164 4.41E-36 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_0552 233fdb45d4a7a2323fa6390531e81e07 261 Gene3D G3DSA:3.40.50.1820 2 260 5.0E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_0552 233fdb45d4a7a2323fa6390531e81e07 261 Pfam PF00756 Putative esterase 9 256 5.2E-27 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 TREPR_0552 233fdb45d4a7a2323fa6390531e81e07 261 SUPERFAMILY SSF53474 5 255 3.81E-38 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_3329 c17cc1cf534a2cb6a8047ad17562a0cb 369 SUPERFAMILY SSF89733 7 362 4.32E-100 T 13-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 TREPR_3329 c17cc1cf534a2cb6a8047ad17562a0cb 369 Gene3D G3DSA:1.10.1530.10 15 353 6.4E-118 T 13-10-2018 TREPR_3329 c17cc1cf534a2cb6a8047ad17562a0cb 369 Pfam PF02615 Malate/L-lactate dehydrogenase 10 352 7.8E-123 T 13-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 TREPR_3329 c17cc1cf534a2cb6a8047ad17562a0cb 369 Gene3D G3DSA:3.30.1370.60 73 336 6.4E-118 T 13-10-2018 TREPR_0746 f06d8757f7b3516e74d44dec863ccc8c 204 SUPERFAMILY SSF55469 1 191 1.01E-26 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_0746 f06d8757f7b3516e74d44dec863ccc8c 204 Pfam PF00881 Nitroreductase family 7 184 1.0E-21 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_0746 f06d8757f7b3516e74d44dec863ccc8c 204 Gene3D G3DSA:3.40.109.10 1 201 5.8E-32 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_1189 c880bcfad9db95e6a74d2f49118e8c84 872 Gene3D G3DSA:2.60.40.2700 118 195 1.2E-6 T 13-10-2018 TREPR_1189 c880bcfad9db95e6a74d2f49118e8c84 872 Gene3D G3DSA:2.60.40.2700 292 372 2.9E-7 T 13-10-2018 TREPR_1189 c880bcfad9db95e6a74d2f49118e8c84 872 Gene3D G3DSA:2.60.40.2700 379 454 5.7E-7 T 13-10-2018 TREPR_1189 c880bcfad9db95e6a74d2f49118e8c84 872 SMART SM00710 749 772 970.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1189 c880bcfad9db95e6a74d2f49118e8c84 872 SMART SM00710 658 679 12.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1189 c880bcfad9db95e6a74d2f49118e8c84 872 SMART SM00710 779 800 140.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1189 c880bcfad9db95e6a74d2f49118e8c84 872 SMART SM00710 716 737 570.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1189 c880bcfad9db95e6a74d2f49118e8c84 872 SMART SM00710 684 708 3500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1189 c880bcfad9db95e6a74d2f49118e8c84 872 SMART SM00710 630 652 340.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3045 56d9f5d5e1d3bdf5a50dd59f47735812 423 Pfam PF13416 Bacterial extracellular solute-binding protein 46 327 1.2E-9 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_3045 56d9f5d5e1d3bdf5a50dd59f47735812 423 SUPERFAMILY SSF53850 44 328 3.53E-22 T 13-10-2018 TREPR_3045 56d9f5d5e1d3bdf5a50dd59f47735812 423 Gene3D G3DSA:3.40.190.10 33 372 1.2E-26 T 13-10-2018 TREPR_3295 86b53f5b84cbd36e8dac1bef54d442a2 192 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3295 86b53f5b84cbd36e8dac1bef54d442a2 192 Pfam PF00005 ABC transporter 45 145 3.4E-13 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3295 86b53f5b84cbd36e8dac1bef54d442a2 192 Gene3D G3DSA:3.40.50.300 2 191 3.0E-38 T 13-10-2018 TREPR_3295 86b53f5b84cbd36e8dac1bef54d442a2 192 SUPERFAMILY SSF52540 38 190 1.3E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1108 7490782338a559c9700f708691f49ca1 348 Gene3D G3DSA:3.90.1150.10 246 339 1.9E-15 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_1108 7490782338a559c9700f708691f49ca1 348 SUPERFAMILY SSF53383 1 337 7.06E-106 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_1108 7490782338a559c9700f708691f49ca1 348 Gene3D G3DSA:3.40.640.10 1 244 1.3E-87 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_1108 7490782338a559c9700f708691f49ca1 348 PIRSF PIRSF017617 1 347 5.1E-119 T 13-10-2018 IPR023603 Threonine aldolase TREPR_1108 7490782338a559c9700f708691f49ca1 348 Pfam PF01212 Beta-eliminating lyase 3 279 2.0E-88 T 13-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 TREPR_0355 d2e89ac5ced5a3f0c80e23a10a7f0984 335 Pfam PF02706 Chain length determinant protein 11 122 5.1E-7 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 72 219 2.2E-48 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 70 223 41.392 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 Gene3D G3DSA:3.30.420.10 71 224 2.4E-47 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 72 223 5.9E-35 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 130 146 1.5E-30 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 152 168 1.5E-30 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 73 86 1.5E-30 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 208 220 1.5E-30 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 176 195 1.5E-30 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TREPR_2937 aff7ba99c628e1b4359d608e0d6ac7f4 226 SUPERFAMILY SSF53098 71 223 2.12E-41 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_3338 d218591900477449ced2f60b2d2ae669 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 225 9.4E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3338 d218591900477449ced2f60b2d2ae669 236 Gene3D G3DSA:1.10.3720.10 1 229 4.6E-37 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3338 d218591900477449ced2f60b2d2ae669 236 SUPERFAMILY SSF161098 19 213 5.89E-30 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2917 442343eea81b61eb3153c46dc441decf 374 Pfam PF02371 Transposase IS116/IS110/IS902 family 224 308 1.4E-11 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 TREPR_2917 442343eea81b61eb3153c46dc441decf 374 Pfam PF01548 Transposase 4 159 1.7E-10 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TREPR_1175 5e21815323af0ced985d394bf18d5f18 183 Pfam PF00011 Hsp20/alpha crystallin family 73 178 3.9E-8 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain TREPR_1175 5e21815323af0ced985d394bf18d5f18 183 SUPERFAMILY SSF49764 57 176 1.92E-12 T 13-10-2018 IPR008978 HSP20-like chaperone TREPR_1175 5e21815323af0ced985d394bf18d5f18 183 Gene3D G3DSA:2.60.40.790 6 178 5.1E-15 T 13-10-2018 IPR008978 HSP20-like chaperone TREPR_3294 7fc72163262115a6dad9178750e7b961 257 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_3294 7fc72163262115a6dad9178750e7b961 257 SUPERFAMILY SSF52540 10 244 5.9E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3294 7fc72163262115a6dad9178750e7b961 257 Pfam PF00005 ABC transporter 33 184 7.1E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3294 7fc72163262115a6dad9178750e7b961 257 Gene3D G3DSA:3.40.50.300 10 257 4.5E-65 T 13-10-2018 TREPR_3294 7fc72163262115a6dad9178750e7b961 257 SMART SM00382 42 228 4.8E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0645 7d1d581a678969bf49e10d1fce9e0a20 385 Pfam PF02169 LPP20 lipoprotein 72 178 1.0E-6 T 13-10-2018 IPR024952 Lipoprotein LPP20-like TREPR_1452 621ac6affb97deafa13efbd426ee9126 427 Pfam PF12704 MacB-like periplasmic core domain 18 217 2.9E-9 T 13-10-2018 IPR025857 MacB-like periplasmic core domain TREPR_1452 621ac6affb97deafa13efbd426ee9126 427 Pfam PF02687 FtsX-like permease family 333 416 2.0E-8 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TREPR_0043 e877d1214f5ab0e0e5dc5b1458150824 660 SUPERFAMILY SSF81901 583 649 5.23E-9 T 13-10-2018 TREPR_0043 e877d1214f5ab0e0e5dc5b1458150824 660 Gene3D G3DSA:1.25.40.10 465 659 2.1E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2568 46072be3e939f0a1d0a9a19d1f7d99a1 299 SUPERFAMILY SSF56349 102 285 1.03E-48 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_2568 46072be3e939f0a1d0a9a19d1f7d99a1 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 83 1.6E-11 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TREPR_2568 46072be3e939f0a1d0a9a19d1f7d99a1 299 SUPERFAMILY SSF47823 16 95 1.08E-11 T 13-10-2018 TREPR_2568 46072be3e939f0a1d0a9a19d1f7d99a1 299 Pfam PF00589 Phage integrase family 108 276 2.2E-41 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TREPR_2568 46072be3e939f0a1d0a9a19d1f7d99a1 299 Gene3D G3DSA:1.10.443.10 106 282 5.9E-60 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_2568 46072be3e939f0a1d0a9a19d1f7d99a1 299 Gene3D G3DSA:1.10.150.130 2 94 2.5E-15 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal TREPR_0475 0ae8e07bb2c3026f58ae3ceabab74d23 327 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 312 6.6E-27 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_0475 0ae8e07bb2c3026f58ae3ceabab74d23 327 SUPERFAMILY SSF51726 1 317 7.32E-36 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_0475 0ae8e07bb2c3026f58ae3ceabab74d23 327 Gene3D G3DSA:3.20.20.210 1 320 1.6E-47 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_2463 88450b3601146d2b5ec83bf99649a44f 253 Pfam PF02348 Cytidylyltransferase 3 222 4.7E-23 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 TREPR_2463 88450b3601146d2b5ec83bf99649a44f 253 SUPERFAMILY SSF53448 3 226 2.94E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2463 88450b3601146d2b5ec83bf99649a44f 253 Gene3D G3DSA:3.90.550.10 2 227 6.8E-22 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0828 69a62ba000dee7848eb0d8b951962c38 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 228 306 5.8E-15 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0828 69a62ba000dee7848eb0d8b951962c38 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 226 325 2.7E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0828 69a62ba000dee7848eb0d8b951962c38 330 SMART SM00382 35 234 3.6E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0828 69a62ba000dee7848eb0d8b951962c38 330 Gene3D G3DSA:3.40.50.300 3 329 1.3E-91 T 13-10-2018 TREPR_0828 69a62ba000dee7848eb0d8b951962c38 330 SUPERFAMILY SSF52540 5 248 8.3E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0828 69a62ba000dee7848eb0d8b951962c38 330 Pfam PF00005 ABC transporter 27 176 4.7E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3779 f3c489a6e3bb74850330119020d13305 389 SUPERFAMILY SSF46548 292 371 3.14E-10 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_3779 f3c489a6e3bb74850330119020d13305 389 Pfam PF13534 4Fe-4S dicluster domain 295 365 9.4E-11 T 13-10-2018 TREPR_3779 f3c489a6e3bb74850330119020d13305 389 SUPERFAMILY SSF51430 2 314 1.83E-53 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_3779 f3c489a6e3bb74850330119020d13305 389 Pfam PF00248 Aldo/keto reductase family 17 283 5.9E-44 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain TREPR_3779 f3c489a6e3bb74850330119020d13305 389 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 351 362 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_3779 f3c489a6e3bb74850330119020d13305 389 Gene3D G3DSA:3.20.20.100 2 284 2.0E-51 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_3367 2e8e8312830761c95a301bf09a48c68b 260 Pfam PF04002 RadC-like JAB domain 138 257 1.6E-34 T 13-10-2018 IPR025657 RadC-like JAB domain TREPR_3367 2e8e8312830761c95a301bf09a48c68b 260 SUPERFAMILY SSF47781 55 128 2.0E-5 T 13-10-2018 IPR010994 RuvA domain 2-like TREPR_3367 2e8e8312830761c95a301bf09a48c68b 260 TIGRFAM TIGR00608 radc: DNA repair protein RadC 51 258 8.9E-53 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 TREPR_3367 2e8e8312830761c95a301bf09a48c68b 260 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 207 212 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site TREPR_3367 2e8e8312830761c95a301bf09a48c68b 260 Gene3D G3DSA:3.40.140.10 135 258 4.1E-37 T 13-10-2018 TREPR_2848 d1e9874b670175098175cdea9283aa19 446 Pfam PF00448 SRP54-type protein, GTPase domain 220 408 6.8E-34 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TREPR_2848 d1e9874b670175098175cdea9283aa19 446 SUPERFAMILY SSF52540 216 400 1.4E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2848 d1e9874b670175098175cdea9283aa19 446 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 9 310 1.1E-55 T 13-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 TREPR_2848 d1e9874b670175098175cdea9283aa19 446 Gene3D G3DSA:1.20.120.1380 164 405 1.1E-58 T 13-10-2018 TREPR_2848 d1e9874b670175098175cdea9283aa19 446 Gene3D G3DSA:3.40.50.300 213 403 1.1E-58 T 13-10-2018 TREPR_2848 d1e9874b670175098175cdea9283aa19 446 SMART SM00962 218 415 6.6E-45 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TREPR_2848 d1e9874b670175098175cdea9283aa19 446 SMART SM00382 217 368 7.2E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0368 d1de89465cb24c6f1a21fd301fae6dc8 518 Pfam PF02875 Mur ligase family, glutamate ligase domain 386 463 1.7E-9 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TREPR_0368 d1de89465cb24c6f1a21fd301fae6dc8 518 Gene3D G3DSA:3.40.1190.10 160 384 5.5E-57 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_0368 d1de89465cb24c6f1a21fd301fae6dc8 518 Pfam PF08245 Mur ligase middle domain 179 366 2.8E-41 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TREPR_0368 d1de89465cb24c6f1a21fd301fae6dc8 518 Gene3D G3DSA:3.90.190.20 385 509 1.6E-16 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_0368 d1de89465cb24c6f1a21fd301fae6dc8 518 SUPERFAMILY SSF53623 173 382 1.57E-43 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TREPR_0368 d1de89465cb24c6f1a21fd301fae6dc8 518 SUPERFAMILY SSF53244 386 473 5.95E-17 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TREPR_0509 b1d753c3f19a0e99288bae69d3e1d872 343 Pfam PF10974 Protein of unknown function (DUF2804) 12 341 9.5E-65 T 13-10-2018 IPR021243 Protein of unknown function DUF2804 TREPR_1271 e6a0505e1ccf89502d42f7b0773582d1 197 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 151 168 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TREPR_1271 e6a0505e1ccf89502d42f7b0773582d1 197 Pfam PF00364 Biotin-requiring enzyme 122 193 2.8E-14 T 13-10-2018 IPR000089 Biotin/lipoyl attachment TREPR_1271 e6a0505e1ccf89502d42f7b0773582d1 197 SUPERFAMILY SSF51230 120 194 1.83E-18 T 13-10-2018 IPR011053 Single hybrid motif TREPR_1271 e6a0505e1ccf89502d42f7b0773582d1 197 Gene3D G3DSA:2.40.50.100 117 194 2.9E-22 T 13-10-2018 TREPR_1271 e6a0505e1ccf89502d42f7b0773582d1 197 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 124 137 6.0E-13 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TREPR_1271 e6a0505e1ccf89502d42f7b0773582d1 197 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 156 169 6.0E-13 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TREPR_1271 e6a0505e1ccf89502d42f7b0773582d1 197 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 141 155 6.0E-13 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TREPR_0064 0f56b1389f118c332ca0c09b7c128d84 189 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 31 130 2.6E-17 T 13-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TREPR_0064 0f56b1389f118c332ca0c09b7c128d84 189 Gene3D G3DSA:3.30.750.24 29 135 9.6E-22 T 13-10-2018 IPR036513 STAS domain superfamily TREPR_0064 0f56b1389f118c332ca0c09b7c128d84 189 SUPERFAMILY SSF52091 31 136 4.51E-22 T 13-10-2018 IPR036513 STAS domain superfamily TREPR_0064 0f56b1389f118c332ca0c09b7c128d84 189 Pfam PF01740 STAS domain 31 132 7.5E-19 T 13-10-2018 IPR002645 STAS domain TREPR_2233 3b707efe7cc9a333f383927bd3c5f1c3 283 Pfam PF03269 Caenorhabditis protein of unknown function, DUF268 158 248 1.1E-12 T 13-10-2018 IPR004951 Protein of unknown function DUF268, Caenorhabditis species TREPR_2233 3b707efe7cc9a333f383927bd3c5f1c3 283 Gene3D G3DSA:3.40.50.150 99 275 7.4E-11 T 13-10-2018 TREPR_2233 3b707efe7cc9a333f383927bd3c5f1c3 283 SUPERFAMILY SSF53335 86 252 1.34E-13 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0437 8c7f3e7fb466ed44e583dc68a309c6b1 177 Pfam PF00881 Nitroreductase family 9 156 4.2E-21 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_0437 8c7f3e7fb466ed44e583dc68a309c6b1 177 SUPERFAMILY SSF55469 1 176 3.4E-38 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_0437 8c7f3e7fb466ed44e583dc68a309c6b1 177 Gene3D G3DSA:3.40.109.10 1 176 1.1E-39 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_3177 1e7a8b46d7e04ebe639195536ae9c351 299 Gene3D G3DSA:3.20.20.70 2 297 4.2E-63 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3177 1e7a8b46d7e04ebe639195536ae9c351 299 SUPERFAMILY SSF51395 16 293 1.26E-49 T 13-10-2018 TREPR_3177 1e7a8b46d7e04ebe639195536ae9c351 299 Pfam PF01070 FMN-dependent dehydrogenase 6 151 8.5E-15 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 TREPR_3177 1e7a8b46d7e04ebe639195536ae9c351 299 Pfam PF01070 FMN-dependent dehydrogenase 152 294 1.6E-46 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 TREPR_0421 321886035879bc0fd7788b0b4c80aa50 454 SUPERFAMILY SSF53686 1 453 8.09E-122 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TREPR_0421 321886035879bc0fd7788b0b4c80aa50 454 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 96 394 6.5E-19 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TREPR_0421 321886035879bc0fd7788b0b4c80aa50 454 Gene3D G3DSA:3.40.50.1100 102 428 7.1E-119 T 13-10-2018 TREPR_0421 321886035879bc0fd7788b0b4c80aa50 454 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 96 110 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 TREPR_0421 321886035879bc0fd7788b0b4c80aa50 454 Gene3D G3DSA:3.40.50.1100 88 425 7.1E-119 T 13-10-2018 TREPR_0421 321886035879bc0fd7788b0b4c80aa50 454 Pfam PF14821 Threonine synthase N terminus 2 80 5.2E-22 T 13-10-2018 IPR029144 Threonine synthase, N-terminal TREPR_0421 321886035879bc0fd7788b0b4c80aa50 454 Gene3D G3DSA:3.90.1380.10 1 83 2.7E-23 T 13-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily TREPR_3813 c2eb1af77cf7c3631d8f54669027bf70 295 SMART SM00481 2 67 1.3E-20 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TREPR_3813 c2eb1af77cf7c3631d8f54669027bf70 295 Pfam PF02811 PHP domain 3 110 8.2E-12 T 13-10-2018 IPR004013 PHP domain GO:0003824 TREPR_3813 c2eb1af77cf7c3631d8f54669027bf70 295 Gene3D G3DSA:1.10.150.650 103 174 2.2E-78 T 13-10-2018 TREPR_3813 c2eb1af77cf7c3631d8f54669027bf70 295 SUPERFAMILY SSF89550 1 274 1.57E-44 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TREPR_3813 c2eb1af77cf7c3631d8f54669027bf70 295 Gene3D G3DSA:3.20.20.140 2 255 2.2E-78 T 13-10-2018 TREPR_2755 899d8b04d1334e5a824e2aac7eae3e6e 252 SUPERFAMILY SSF52540 1 250 5.16E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2755 899d8b04d1334e5a824e2aac7eae3e6e 252 PIRSF PIRSF009320 3 90 8.1E-16 T 13-10-2018 TREPR_2755 899d8b04d1334e5a824e2aac7eae3e6e 252 PIRSF PIRSF009320 91 252 2.4E-7 T 13-10-2018 TREPR_2755 899d8b04d1334e5a824e2aac7eae3e6e 252 Gene3D G3DSA:3.40.50.300 1 251 1.4E-78 T 13-10-2018 TREPR_2755 899d8b04d1334e5a824e2aac7eae3e6e 252 Pfam PF13614 AAA domain 3 176 9.1E-59 T 13-10-2018 IPR025669 AAA domain TREPR_1941 16d4fab59c214dee87eb43bacf54c90f 273 Pfam PF01189 16S rRNA methyltransferase RsmB/F 70 234 1.3E-27 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 TREPR_1941 16d4fab59c214dee87eb43bacf54c90f 273 SUPERFAMILY SSF53335 58 271 2.2E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_1941 16d4fab59c214dee87eb43bacf54c90f 273 Gene3D G3DSA:3.40.50.150 9 270 1.6E-47 T 13-10-2018 TREPR_1941 16d4fab59c214dee87eb43bacf54c90f 273 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 80 90 3.8E-14 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TREPR_1941 16d4fab59c214dee87eb43bacf54c90f 273 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 203 219 3.8E-14 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TREPR_1941 16d4fab59c214dee87eb43bacf54c90f 273 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 153 165 3.8E-14 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TREPR_2625 8a21595f7d13e3165f3b69428e0fcb2f 222 SUPERFAMILY SSF56300 1 220 4.95E-28 T 13-10-2018 TREPR_2625 8a21595f7d13e3165f3b69428e0fcb2f 222 Pfam PF00149 Calcineurin-like phosphoesterase 2 188 2.6E-9 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TREPR_3783 2673c3b3fbfe9780ea142354c0b8f4ee 292 SUPERFAMILY SSF51569 36 276 2.23E-57 T 13-10-2018 TREPR_3783 2673c3b3fbfe9780ea142354c0b8f4ee 292 Gene3D G3DSA:3.20.20.70 1 291 9.9E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3783 2673c3b3fbfe9780ea142354c0b8f4ee 292 PIRSF PIRSF038992 32 290 8.3E-64 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TREPR_3783 2673c3b3fbfe9780ea142354c0b8f4ee 292 SMART SM01133 52 260 1.9E-24 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TREPR_3783 2673c3b3fbfe9780ea142354c0b8f4ee 292 Pfam PF01791 DeoC/LacD family aldolase 53 259 2.9E-17 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 SUPERFAMILY SSF49265 726 892 3.78E-10 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 Gene3D G3DSA:2.60.40.10 714 807 5.4E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 Pfam PF12733 Cadherin-like beta sandwich domain 910 999 2.3E-9 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 SMART SM00060 809 889 0.018 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 SMART SM00060 620 700 11.0 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 SMART SM00060 437 510 3.5 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 SMART SM00060 525 607 3.8 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 SMART SM00060 715 795 38.0 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 SUPERFAMILY SSF49265 536 715 1.59E-5 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 TREPR_2785 da9f630d259eb9a9eb15c47762e21a9b 1096 Gene3D G3DSA:2.60.40.10 808 903 3.2E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_0764 bf783dc09ea4192e50ed2116ff8d2080 89 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 75 7.5E-25 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 TREPR_0764 bf783dc09ea4192e50ed2116ff8d2080 89 Gene3D G3DSA:3.30.70.330 1 88 1.6E-32 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TREPR_0764 bf783dc09ea4192e50ed2116ff8d2080 89 SUPERFAMILY SSF54928 3 86 5.64E-33 T 13-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 TREPR_0764 bf783dc09ea4192e50ed2116ff8d2080 89 SMART SM00360 4 77 7.4E-31 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 TREPR_3320 bf20ca7660cf5a80a650bf6c5211adda 321 Pfam PF04754 Putative transposase, YhgA-like 60 151 3.7E-8 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like TREPR_0186 65b3400e20fd2e995938af40b28271ff 127 SUPERFAMILY SSF88723 1 114 4.21E-7 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_0186 65b3400e20fd2e995938af40b28271ff 127 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 109 5.3E-17 T 13-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component TREPR_0186 65b3400e20fd2e995938af40b28271ff 127 Pfam PF13470 PIN domain 3 110 1.9E-12 T 13-10-2018 IPR002716 PIN domain TREPR_2888 aa5acbb08db1a3de7173d9ec295b8e10 125 PRINTS PR00340 P-II protein signature 2 17 8.1E-19 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2888 aa5acbb08db1a3de7173d9ec295b8e10 125 PRINTS PR00340 P-II protein signature 94 114 8.1E-19 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2888 aa5acbb08db1a3de7173d9ec295b8e10 125 PRINTS PR00340 P-II protein signature 63 86 8.1E-19 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2888 aa5acbb08db1a3de7173d9ec295b8e10 125 PRINTS PR00340 P-II protein signature 23 41 8.1E-19 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2888 aa5acbb08db1a3de7173d9ec295b8e10 125 Pfam PF00543 Nitrogen regulatory protein P-II 4 116 6.2E-27 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2888 aa5acbb08db1a3de7173d9ec295b8e10 125 ProSitePatterns PS00638 P-II protein C-terminal region signature. 94 107 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 TREPR_2888 aa5acbb08db1a3de7173d9ec295b8e10 125 SMART SM00938 4 116 6.9E-33 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2888 aa5acbb08db1a3de7173d9ec295b8e10 125 SUPERFAMILY SSF54913 1 122 1.05E-28 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TREPR_2888 aa5acbb08db1a3de7173d9ec295b8e10 125 Gene3D G3DSA:3.30.70.120 1 125 3.5E-39 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TREPR_0298 014d855551ce96420c785a4a176a0f44 731 SMART SM00044 405 633 3.4E-6 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_0298 014d855551ce96420c785a4a176a0f44 731 SUPERFAMILY SSF55073 439 652 5.02E-46 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_0298 014d855551ce96420c785a4a176a0f44 731 Pfam PF05226 CHASE2 domain 8 346 4.4E-46 T 13-10-2018 IPR007890 CHASE2 TREPR_0298 014d855551ce96420c785a4a176a0f44 731 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 443 641 7.7E-24 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TREPR_0298 014d855551ce96420c785a4a176a0f44 731 SMART SM01080 8 349 1.3E-54 T 13-10-2018 IPR007890 CHASE2 TREPR_0298 014d855551ce96420c785a4a176a0f44 731 Gene3D G3DSA:3.30.70.1230 438 659 3.1E-58 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_1130 32783934425937b625ad93e8974512d5 379 SUPERFAMILY SSF53807 57 367 1.26E-43 T 13-10-2018 TREPR_1130 32783934425937b625ad93e8974512d5 379 Pfam PF01497 Periplasmic binding protein 120 308 2.0E-15 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain TREPR_1130 32783934425937b625ad93e8974512d5 379 Gene3D G3DSA:1.20.58.2180 189 362 1.1E-46 T 13-10-2018 TREPR_1130 32783934425937b625ad93e8974512d5 379 Gene3D G3DSA:3.40.50.1980 52 184 1.8E-29 T 13-10-2018 TREPR_1130 32783934425937b625ad93e8974512d5 379 Gene3D G3DSA:3.40.50.1980 214 316 1.1E-46 T 13-10-2018 TREPR_1803 8ef81cfcc238fd80c16974a58ef89a1e 611 SMART SM00642 85 438 8.2E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TREPR_1803 8ef81cfcc238fd80c16974a58ef89a1e 611 Pfam PF00128 Alpha amylase, catalytic domain 115 276 1.7E-15 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TREPR_1803 8ef81cfcc238fd80c16974a58ef89a1e 611 SUPERFAMILY SSF51445 101 518 1.23E-68 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_1803 8ef81cfcc238fd80c16974a58ef89a1e 611 Gene3D G3DSA:3.20.20.80 89 489 1.3E-135 T 13-10-2018 TREPR_1803 8ef81cfcc238fd80c16974a58ef89a1e 611 Gene3D G3DSA:3.90.400.10 164 238 1.3E-135 T 13-10-2018 TREPR_3419 7d88c9a0f6f446fc53058719ab567a58 177 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 7 176 1.5E-25 T 13-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 TREPR_3419 7d88c9a0f6f446fc53058719ab567a58 177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 174 1.1E-37 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TREPR_3419 7d88c9a0f6f446fc53058719ab567a58 177 Gene3D G3DSA:3.40.920.10 3 177 1.1E-48 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TREPR_3419 7d88c9a0f6f446fc53058719ab567a58 177 SUPERFAMILY SSF53323 6 176 1.23E-44 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TREPR_1064 b066391325fa30b5258a315e72b035fb 215 Gene3D G3DSA:3.40.50.150 21 213 1.2E-35 T 13-10-2018 TREPR_1064 b066391325fa30b5258a315e72b035fb 215 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 36 200 2.5E-18 T 13-10-2018 IPR008884 Macrocin-O-methyltransferase TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 105 521 5.4E-131 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 55 537 36.69 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 Gene3D G3DSA:3.30.1360.200 240 346 5.6E-21 T 13-10-2018 TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 Pfam PF02355 Protein export membrane protein 354 521 2.3E-19 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 PRINTS PR00702 Acriflavin resistance protein family signature 424 448 1.3E-6 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 PRINTS PR00702 Acriflavin resistance protein family signature 499 522 1.3E-6 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 PRINTS PR00702 Acriflavin resistance protein family signature 371 394 1.3E-6 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 Pfam PF07549 SecD/SecF GG Motif 104 123 6.3E-4 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 Gene3D G3DSA:1.20.1640.10 366 518 1.2E-11 T 13-10-2018 TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 SUPERFAMILY SSF82866 276 522 2.75E-40 T 13-10-2018 TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 Gene3D G3DSA:3.30.70.3400 105 200 6.6E-20 T 13-10-2018 TREPR_1546 38ede54924add0ec48c49d4ca5eff4f1 551 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 287 515 3.2E-72 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TREPR_1354 328a1bee2624ac2343f7e68fd11302f3 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 124 4.3E-20 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TREPR_1354 328a1bee2624ac2343f7e68fd11302f3 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 228 6.5E-11 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1354 328a1bee2624ac2343f7e68fd11302f3 238 Gene3D G3DSA:1.10.3720.10 4 232 5.8E-47 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1354 328a1bee2624ac2343f7e68fd11302f3 238 SUPERFAMILY SSF161098 15 218 4.97E-40 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0216 42e4e09cdaa34cd47dc0b989aede8bb1 133 SUPERFAMILY SSF88723 1 121 2.07E-14 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_0216 42e4e09cdaa34cd47dc0b989aede8bb1 133 Pfam PF01850 PIN domain 4 120 1.8E-6 T 13-10-2018 IPR002716 PIN domain TREPR_0216 42e4e09cdaa34cd47dc0b989aede8bb1 133 Gene3D G3DSA:3.40.50.1010 1 126 1.3E-7 T 13-10-2018 TREPR_0320 42e4e09cdaa34cd47dc0b989aede8bb1 133 SUPERFAMILY SSF88723 1 121 2.07E-14 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_0320 42e4e09cdaa34cd47dc0b989aede8bb1 133 Pfam PF01850 PIN domain 4 120 1.8E-6 T 13-10-2018 IPR002716 PIN domain TREPR_0320 42e4e09cdaa34cd47dc0b989aede8bb1 133 Gene3D G3DSA:3.40.50.1010 1 126 1.3E-7 T 13-10-2018 TREPR_3015 37e603c76fa712c9146d8fbd7d7c90e8 245 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 39 193 7.1E-6 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related TREPR_3015 37e603c76fa712c9146d8fbd7d7c90e8 245 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 24 194 2.3E-11 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 TREPR_0519 0677ff7357b52fffb86780a34a112a9e 229 SUPERFAMILY SSF74653 122 225 6.8E-15 T 13-10-2018 TREPR_0519 0677ff7357b52fffb86780a34a112a9e 229 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 146 225 7.8E-14 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 TREPR_0519 0677ff7357b52fffb86780a34a112a9e 229 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 148 225 1.5E-12 T 13-10-2018 IPR006260 TonB/TolA, C-terminal TREPR_0519 0677ff7357b52fffb86780a34a112a9e 229 Gene3D G3DSA:3.30.1150.10 111 226 3.1E-23 T 13-10-2018 TREPR_2756 14b990711a64379e8afec5ab3ace4a20 280 Gene3D G3DSA:3.30.1240.10 88 192 6.4E-68 T 13-10-2018 TREPR_2756 14b990711a64379e8afec5ab3ace4a20 280 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 264 4.2E-55 T 13-10-2018 IPR000150 Cof family GO:0016787 TREPR_2756 14b990711a64379e8afec5ab3ace4a20 280 Gene3D G3DSA:3.40.50.1000 5 265 6.4E-68 T 13-10-2018 IPR023214 HAD superfamily TREPR_2756 14b990711a64379e8afec5ab3ace4a20 280 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 264 2.1E-60 T 13-10-2018 TREPR_2756 14b990711a64379e8afec5ab3ace4a20 280 SUPERFAMILY SSF56784 2 269 2.67E-68 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_2756 14b990711a64379e8afec5ab3ace4a20 280 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 13-10-2018 TREPR_2756 14b990711a64379e8afec5ab3ace4a20 280 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 1.0E-25 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 PIRSF PIRSF000363 5 279 2.7E-102 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 SUPERFAMILY SSF52540 6 274 9.08E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 ProSitePatterns PS00746 NifH/frxC family signature 1. 88 100 - T 13-10-2018 IPR030655 NifH/chlL conserved site TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 ProSitePatterns PS00692 NifH/frxC family signature 2. 127 140 - T 13-10-2018 IPR030655 NifH/chlL conserved site TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 8 271 7.3E-95 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 PRINTS PR00091 Nitrogenase component II signature 126 141 1.9E-33 T 13-10-2018 TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 PRINTS PR00091 Nitrogenase component II signature 86 100 1.9E-33 T 13-10-2018 TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 PRINTS PR00091 Nitrogenase component II signature 12 25 1.9E-33 T 13-10-2018 TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 PRINTS PR00091 Nitrogenase component II signature 34 49 1.9E-33 T 13-10-2018 TREPR_0248 91bf8e2ba69124e3d4de4fcc972f4174 292 Gene3D G3DSA:3.40.50.300 7 274 1.6E-58 T 13-10-2018 TREPR_0912 29c49a817b4da5904dfc1b404b85b02c 287 Pfam PF02195 ParB-like nuclease domain 29 116 6.6E-13 T 13-10-2018 IPR003115 ParB/Sulfiredoxin TREPR_0912 29c49a817b4da5904dfc1b404b85b02c 287 SUPERFAMILY SSF110849 19 121 7.15E-18 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TREPR_0912 29c49a817b4da5904dfc1b404b85b02c 287 SMART SM00470 27 117 2.7E-12 T 13-10-2018 IPR003115 ParB/Sulfiredoxin TREPR_0912 29c49a817b4da5904dfc1b404b85b02c 287 Gene3D G3DSA:3.90.1530.30 40 104 1.3E-12 T 13-10-2018 TREPR_0912 29c49a817b4da5904dfc1b404b85b02c 287 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 46 165 8.3E-19 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TREPR_0912 29c49a817b4da5904dfc1b404b85b02c 287 SUPERFAMILY SSF109709 110 222 9.68E-12 T 13-10-2018 TREPR_0912 29c49a817b4da5904dfc1b404b85b02c 287 Gene3D G3DSA:1.10.10.2830 105 219 7.0E-10 T 13-10-2018 TREPR_1571 4d07326aa84a7a6a44ee840fc10db897 189 Gene3D G3DSA:1.10.3210.10 13 171 9.2E-14 T 13-10-2018 TREPR_1571 4d07326aa84a7a6a44ee840fc10db897 189 SUPERFAMILY SSF109604 21 157 7.22E-19 T 13-10-2018 TREPR_3370 6896d35d9e9e4b9bff2d1144c2fcf8c9 214 Pfam PF01618 MotA/TolQ/ExbB proton channel family 89 198 6.6E-29 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TREPR_0353 eefead3315ee1f38424697e33d704d8d 221 Pfam PF02397 Bacterial sugar transferase 3 196 1.0E-47 T 13-10-2018 IPR003362 Bacterial sugar transferase TREPR_2994 9b6ac3948fad9a6f51d9c4982d7085c6 173 SUPERFAMILY SSF55469 1 171 1.83E-44 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_2994 9b6ac3948fad9a6f51d9c4982d7085c6 173 Pfam PF00881 Nitroreductase family 8 60 1.2E-11 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_2994 9b6ac3948fad9a6f51d9c4982d7085c6 173 Pfam PF00881 Nitroreductase family 69 146 1.2E-6 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_2994 9b6ac3948fad9a6f51d9c4982d7085c6 173 Gene3D G3DSA:3.40.109.10 2 172 5.1E-42 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_3152 fc0c2f5dffb712c1c36033cea62bbb96 953 SUPERFAMILY SSF48452 606 738 4.46E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3152 fc0c2f5dffb712c1c36033cea62bbb96 953 Gene3D G3DSA:1.25.40.10 592 775 9.7E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2078 4ff29fec8c0c3d8540db56506c7cc069 771 Gene3D G3DSA:2.60.40.10 34 147 2.5E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_3278 e481228221c29bf361d9e28f3d3f18e3 217 Gene3D G3DSA:3.40.50.150 1 209 4.6E-37 T 13-10-2018 TREPR_3278 e481228221c29bf361d9e28f3d3f18e3 217 SUPERFAMILY SSF53335 3 196 1.98E-37 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3278 e481228221c29bf361d9e28f3d3f18e3 217 Pfam PF08241 Methyltransferase domain 50 144 1.8E-23 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TREPR_1903 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 SUPERFAMILY SSF46689 11 113 8.6E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_1903 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 Pfam PF13551 Winged helix-turn helix 13 72 1.4E-14 T 13-10-2018 TREPR_1903 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 Pfam PF00665 Integrase core domain 160 282 1.6E-20 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TREPR_1903 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 SUPERFAMILY SSF53098 159 333 1.9E-34 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_1903 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 Gene3D G3DSA:3.30.420.10 156 322 1.7E-14 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_0738 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 SUPERFAMILY SSF46689 11 113 8.6E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_0738 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 Pfam PF13551 Winged helix-turn helix 13 72 1.4E-14 T 13-10-2018 TREPR_0738 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 Pfam PF00665 Integrase core domain 160 282 1.6E-20 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TREPR_0738 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 SUPERFAMILY SSF53098 159 333 1.9E-34 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_0738 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 Gene3D G3DSA:3.30.420.10 156 322 1.7E-14 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_1963 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 SUPERFAMILY SSF46689 11 113 8.6E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_1963 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 Pfam PF13551 Winged helix-turn helix 13 72 1.4E-14 T 13-10-2018 TREPR_1963 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 Pfam PF00665 Integrase core domain 160 282 1.6E-20 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TREPR_1963 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 SUPERFAMILY SSF53098 159 333 1.9E-34 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_1963 7b9d8628f6ed0ef5a668f1fcad0fd3ea 351 Gene3D G3DSA:3.30.420.10 156 322 1.7E-14 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TREPR_2589 57c9113dea9c2bdadb3f182746a8de87 491 Gene3D G3DSA:1.10.443.10 207 396 2.9E-14 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_2589 57c9113dea9c2bdadb3f182746a8de87 491 SUPERFAMILY SSF56349 87 391 4.12E-17 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_0168 8bea8c799df6dd0f43e828ef7c810405 425 SUPERFAMILY SSF102114 151 395 4.32E-8 T 13-10-2018 TREPR_0168 8bea8c799df6dd0f43e828ef7c810405 425 Gene3D G3DSA:3.20.20.70 151 309 8.1E-8 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3236 30fc91c99bec802526b47513f222eef3 151 Gene3D G3DSA:2.60.40.790 5 149 1.6E-34 T 13-10-2018 IPR008978 HSP20-like chaperone TREPR_3236 30fc91c99bec802526b47513f222eef3 151 SUPERFAMILY SSF49764 16 148 5.93E-34 T 13-10-2018 IPR008978 HSP20-like chaperone TREPR_3236 30fc91c99bec802526b47513f222eef3 151 Pfam PF00011 Hsp20/alpha crystallin family 43 148 6.5E-23 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain TREPR_0109 d1796f8693730ba0d73b728c73c81356 997 PIRSF PIRSF005719 517 940 2.0E-103 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein TREPR_0109 d1796f8693730ba0d73b728c73c81356 997 PIRSF PIRSF005719 1 472 9.3E-104 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein TREPR_0109 d1796f8693730ba0d73b728c73c81356 997 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 934 18.531 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 TREPR_0109 d1796f8693730ba0d73b728c73c81356 997 Gene3D G3DSA:3.40.50.300 647 940 4.9E-49 T 13-10-2018 TREPR_0109 d1796f8693730ba0d73b728c73c81356 997 Gene3D G3DSA:3.40.50.300 1 238 9.3E-56 T 13-10-2018 TREPR_0109 d1796f8693730ba0d73b728c73c81356 997 SUPERFAMILY SSF52540 2 925 8.07E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0109 d1796f8693730ba0d73b728c73c81356 997 SUPERFAMILY SSF57997 526 763 7.19E-6 T 13-10-2018 TREPR_0109 d1796f8693730ba0d73b728c73c81356 997 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 925 8.8E-73 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TREPR_1478 5c815cd60a2453d8371c06f19a649d84 223 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 213 29.764 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1478 5c815cd60a2453d8371c06f19a649d84 223 Gene3D G3DSA:3.40.1370.10 1 218 7.4E-66 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_1478 5c815cd60a2453d8371c06f19a649d84 223 Pfam PF00573 Ribosomal protein L4/L1 family 16 208 3.7E-57 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 TREPR_1478 5c815cd60a2453d8371c06f19a649d84 223 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 208 8.3E-63 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_1478 5c815cd60a2453d8371c06f19a649d84 223 SUPERFAMILY SSF52166 1 210 1.27E-63 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_0077 2f236e30fd6b07cc156bce90f7cb2a86 252 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 172 235 6.5E-8 T 13-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 TREPR_0077 2f236e30fd6b07cc156bce90f7cb2a86 252 SUPERFAMILY SSF81296 170 235 3.08E-14 T 13-10-2018 IPR014756 Immunoglobulin E-set TREPR_0077 2f236e30fd6b07cc156bce90f7cb2a86 252 Gene3D G3DSA:2.60.40.10 165 251 5.8E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_0011 cb3e512a2ef24a59ef7a74bce16af187 231 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 50 229 1.4E-16 T 13-10-2018 IPR008884 Macrocin-O-methyltransferase TREPR_0011 cb3e512a2ef24a59ef7a74bce16af187 231 Gene3D G3DSA:3.40.50.150 35 231 3.2E-34 T 13-10-2018 TREPR_0011 cb3e512a2ef24a59ef7a74bce16af187 231 SUPERFAMILY SSF53335 69 195 4.16E-5 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0086 1436d095b382b09ad8bf3ee396164b16 284 SUPERFAMILY SSF161098 55 270 1.96E-36 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0086 1436d095b382b09ad8bf3ee396164b16 284 Gene3D G3DSA:1.10.3720.10 14 281 2.4E-37 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0086 1436d095b382b09ad8bf3ee396164b16 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 280 7.8E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3306 226dcb543871ff46495c6f4ca2a6320a 154 Pfam PF06803 Protein of unknown function (DUF1232) 62 97 4.2E-13 T 13-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 TREPR_2147 10dcce69d7abf6c0a5fb2d24049c91bb 557 Gene3D G3DSA:3.40.50.970 375 521 3.0E-10 T 13-10-2018 TREPR_2147 10dcce69d7abf6c0a5fb2d24049c91bb 557 PIRSF PIRSF006439 2 555 3.2E-151 T 13-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 TREPR_2147 10dcce69d7abf6c0a5fb2d24049c91bb 557 SUPERFAMILY SSF52518 5 206 1.24E-53 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_2147 10dcce69d7abf6c0a5fb2d24049c91bb 557 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 185 2.0E-15 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TREPR_2147 10dcce69d7abf6c0a5fb2d24049c91bb 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 400 492 7.7E-14 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TREPR_2147 10dcce69d7abf6c0a5fb2d24049c91bb 557 Gene3D G3DSA:3.40.50.970 2 186 3.5E-52 T 13-10-2018 TREPR_2147 10dcce69d7abf6c0a5fb2d24049c91bb 557 SUPERFAMILY SSF52518 360 545 8.0E-21 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0405 1ed91c28f6d46a7b356cab0429020ffe 342 SUPERFAMILY SSF53822 61 329 6.34E-69 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0405 1ed91c28f6d46a7b356cab0429020ffe 342 SMART SM00354 1 71 2.7E-28 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0405 1ed91c28f6d46a7b356cab0429020ffe 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.5E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 TREPR_0405 1ed91c28f6d46a7b356cab0429020ffe 342 SUPERFAMILY SSF47413 1 59 5.2E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0405 1ed91c28f6d46a7b356cab0429020ffe 342 Gene3D G3DSA:3.40.50.2300 62 319 8.5E-71 T 13-10-2018 TREPR_0405 1ed91c28f6d46a7b356cab0429020ffe 342 Pfam PF13377 Periplasmic binding protein-like domain 166 327 2.4E-40 T 13-10-2018 TREPR_0405 1ed91c28f6d46a7b356cab0429020ffe 342 Gene3D G3DSA:1.10.260.40 1 60 1.8E-19 T 13-10-2018 TREPR_0405 1ed91c28f6d46a7b356cab0429020ffe 342 Gene3D G3DSA:3.40.50.2300 158 324 8.5E-71 T 13-10-2018 TREPR_0786 0ebc6e870e56d5fcfe0421e16726788d 292 Gene3D G3DSA:3.80.10.10 74 281 3.5E-37 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_0786 0ebc6e870e56d5fcfe0421e16726788d 292 Pfam PF13306 Leucine rich repeats (6 copies) 171 276 1.2E-24 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_0786 0ebc6e870e56d5fcfe0421e16726788d 292 SUPERFAMILY SSF52058 149 275 1.28E-14 T 13-10-2018 TREPR_0306 acc72d8150b0fbf6cbd75307624e05b8 198 PIRSF PIRSF006102 1 198 1.2E-51 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TREPR_0306 acc72d8150b0fbf6cbd75307624e05b8 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.6E-53 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TREPR_3834 a05a8afa09f1c8d267e4a23f9f486c2b 240 Pfam PF16481 Domain of unknown function (DUF5058) 9 231 2.2E-60 T 13-10-2018 IPR032479 Protein of unknown function DUF5058 TREPR_2405 15f42b3500cf1ea88f7dc8aace586287 365 Pfam PF00534 Glycosyl transferases group 1 193 334 4.2E-27 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 TREPR_2405 15f42b3500cf1ea88f7dc8aace586287 365 Pfam PF13439 Glycosyltransferase Family 4 15 187 9.6E-10 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TREPR_2405 15f42b3500cf1ea88f7dc8aace586287 365 Gene3D G3DSA:3.40.50.2000 1 193 1.5E-6 T 13-10-2018 TREPR_2405 15f42b3500cf1ea88f7dc8aace586287 365 SUPERFAMILY SSF53756 1 361 5.5E-53 T 13-10-2018 TREPR_2405 15f42b3500cf1ea88f7dc8aace586287 365 Gene3D G3DSA:3.40.50.2000 194 335 5.2E-26 T 13-10-2018 TREPR_0008 e6195e31a627bdd7c0bb9acc1726949e 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 210 9.6E-20 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TREPR_0008 e6195e31a627bdd7c0bb9acc1726949e 306 Gene3D G3DSA:3.40.50.720 1 302 2.4E-48 T 13-10-2018 TREPR_0008 e6195e31a627bdd7c0bb9acc1726949e 306 SUPERFAMILY SSF51735 1 300 7.04E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1721 dc6fd49c9759551063c7bd778b585328 376 Gene3D G3DSA:1.25.40.10 1 133 1.5E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1721 dc6fd49c9759551063c7bd778b585328 376 SUPERFAMILY SSF48452 7 125 6.21E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1721 dc6fd49c9759551063c7bd778b585328 376 Pfam PF13432 Tetratricopeptide repeat 14 66 0.0022 T 13-10-2018 TREPR_2996 264585a63866dfd9a18cdec7d669e206 233 PRINTS PR01874 DNA repair protein radA signature 17 45 4.0E-5 T 13-10-2018 TREPR_2996 264585a63866dfd9a18cdec7d669e206 233 PRINTS PR01874 DNA repair protein radA signature 216 233 4.0E-5 T 13-10-2018 TREPR_2996 264585a63866dfd9a18cdec7d669e206 233 SUPERFAMILY SSF52540 12 200 6.46E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2996 264585a63866dfd9a18cdec7d669e206 233 Gene3D G3DSA:3.40.50.300 12 226 1.1E-15 T 13-10-2018 TREPR_1331 10fb2f4cdedbd2b0c6c4acbfd67d3162 393 Pfam PF07907 YibE/F-like protein 140 376 1.3E-72 T 13-10-2018 IPR012507 YibE/F-like TREPR_1582 fa139c007e17bce62b6922e786c3c1f8 207 Gene3D G3DSA:3.40.50.360 10 190 1.6E-33 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_1582 fa139c007e17bce62b6922e786c3c1f8 207 Pfam PF03358 NADPH-dependent FMN reductase 11 160 4.1E-17 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TREPR_1582 fa139c007e17bce62b6922e786c3c1f8 207 SUPERFAMILY SSF52218 11 190 4.53E-27 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_1744 14a752d360a20c5d04d851a24e05f1b0 162 Pfam PF02681 Divergent PAP2 family 18 155 1.5E-42 T 13-10-2018 IPR003832 Protein of unknown function DUF212 TREPR_1259 c6c2c9d5019240a9ae20cd3618429556 339 Pfam PF00781 Diacylglycerol kinase catalytic domain 14 121 1.5E-10 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 TREPR_1259 c6c2c9d5019240a9ae20cd3618429556 339 SUPERFAMILY SSF111331 11 328 1.85E-45 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TREPR_1259 c6c2c9d5019240a9ae20cd3618429556 339 Gene3D G3DSA:3.40.50.10330 10 140 1.5E-13 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TREPR_1259 c6c2c9d5019240a9ae20cd3618429556 339 Gene3D G3DSA:2.60.200.40 141 319 1.7E-32 T 13-10-2018 TREPR_1361 5be9c638836966a7163f771e9f0a011a 118 SUPERFAMILY SSF51703 17 115 1.18E-13 T 13-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 TREPR_1361 5be9c638836966a7163f771e9f0a011a 118 Gene3D G3DSA:1.10.8.1000 45 118 4.2E-31 T 13-10-2018 TREPR_1361 5be9c638836966a7163f771e9f0a011a 118 Pfam PF16552 D-ornithine 4,5-aminomutase alpha-subunit 2 116 5.9E-54 T 13-10-2018 IPR015130 D-Lysine 5,6-aminomutase alpha subunit TREPR_2263 4bed705e4893fa7b02d3f928f0cc8b60 478 SMART SM00885 47 199 7.1E-41 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal TREPR_2263 4bed705e4893fa7b02d3f928f0cc8b60 478 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 149 449 2.2E-92 T 13-10-2018 IPR006500 DNA primase, phage/plasmid TREPR_2263 4bed705e4893fa7b02d3f928f0cc8b60 478 Pfam PF08706 D5 N terminal like 47 198 3.0E-34 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal TREPR_2263 4bed705e4893fa7b02d3f928f0cc8b60 478 Pfam PF03288 Poxvirus D5 protein-like 404 458 5.7E-5 T 13-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal TREPR_2263 4bed705e4893fa7b02d3f928f0cc8b60 478 SUPERFAMILY SSF52540 167 376 2.92E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0176 ffced8c32474fb50ae5d3bf600cba1c0 251 SUPERFAMILY SSF50685 39 111 6.59E-6 T 13-10-2018 IPR036908 RlpA-like domain superfamily TREPR_0176 ffced8c32474fb50ae5d3bf600cba1c0 251 Pfam PF03330 Lytic transglycolase 41 106 4.9E-8 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain TREPR_0176 ffced8c32474fb50ae5d3bf600cba1c0 251 Gene3D G3DSA:2.40.40.10 24 111 3.7E-17 T 13-10-2018 IPR036908 RlpA-like domain superfamily TREPR_2324 8a1627d15ef0342042631bfe3e80ce91 316 SUPERFAMILY SSF81901 58 311 2.88E-18 T 13-10-2018 TREPR_2324 8a1627d15ef0342042631bfe3e80ce91 316 SMART SM00028 240 273 160.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2324 8a1627d15ef0342042631bfe3e80ce91 316 SMART SM00028 203 236 59.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2324 8a1627d15ef0342042631bfe3e80ce91 316 SMART SM00028 274 307 0.17 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2324 8a1627d15ef0342042631bfe3e80ce91 316 Gene3D G3DSA:1.25.40.10 247 316 1.9E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2324 8a1627d15ef0342042631bfe3e80ce91 316 Gene3D G3DSA:1.25.40.10 55 240 4.1E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2324 8a1627d15ef0342042631bfe3e80ce91 316 Pfam PF09976 Tetratricopeptide repeat-like domain 181 308 4.4E-8 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 TREPR_2792 3f87deebeb6c4a387908d93a0309f507 361 Pfam PF00953 Glycosyl transferase family 4 83 238 9.3E-36 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 TREPR_2792 3f87deebeb6c4a387908d93a0309f507 361 ProSitePatterns PS01348 MraY family signature 2. 158 169 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_3361 68b00a4b0fc63bc8039d5dfc5addcd59 145 Pfam PF00072 Response regulator receiver domain 27 139 8.6E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3361 68b00a4b0fc63bc8039d5dfc5addcd59 145 SUPERFAMILY SSF52172 24 144 2.7E-33 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3361 68b00a4b0fc63bc8039d5dfc5addcd59 145 SMART SM00448 25 139 3.6E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3361 68b00a4b0fc63bc8039d5dfc5addcd59 145 Gene3D G3DSA:3.40.50.2300 16 143 3.9E-35 T 13-10-2018 TREPR_0868 6e3f1d32bc5f68d3e0b70063aa06f242 696 Gene3D G3DSA:2.160.20.110 393 569 4.1E-36 T 13-10-2018 TREPR_0868 6e3f1d32bc5f68d3e0b70063aa06f242 696 Pfam PF07581 The GLUG motif 479 500 9.6E-4 T 13-10-2018 IPR011493 GLUG TREPR_2375 45461c6a835305df78a4a059cb78727d 445 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 48 439 1.1E-87 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TREPR_2375 45461c6a835305df78a4a059cb78727d 445 Gene3D G3DSA:3.90.1150.10 314 444 3.4E-44 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_2375 45461c6a835305df78a4a059cb78727d 445 Gene3D G3DSA:3.40.640.10 6 312 4.2E-90 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_2375 45461c6a835305df78a4a059cb78727d 445 SUPERFAMILY SSF53383 36 440 9.32E-93 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_2375 45461c6a835305df78a4a059cb78727d 445 PIRSF PIRSF000390 34 444 1.3E-99 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TREPR_2523 075122bbabe5effeeaf7ad276882e2fd 851 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 761 844 1.4E-14 T 13-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2523 075122bbabe5effeeaf7ad276882e2fd 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 307 427 1.1E-5 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TREPR_2523 075122bbabe5effeeaf7ad276882e2fd 851 Gene3D G3DSA:3.40.710.10 255 638 4.1E-64 T 13-10-2018 TREPR_2523 075122bbabe5effeeaf7ad276882e2fd 851 SUPERFAMILY SSF53955 30 250 7.87E-56 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily TREPR_2523 075122bbabe5effeeaf7ad276882e2fd 851 Gene3D G3DSA:1.10.3810.10 58 240 3.2E-48 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2523 075122bbabe5effeeaf7ad276882e2fd 851 Pfam PF00912 Transglycosylase 63 217 1.0E-43 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2523 075122bbabe5effeeaf7ad276882e2fd 851 SUPERFAMILY SSF56601 199 619 1.1E-70 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TREPR_0652 5f5c2d67e0d5aef20483d8ebc54b9b3c 133 Pfam PF06616 BsuBI/PstI restriction endonuclease C-terminus 1 128 2.7E-38 T 13-10-2018 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 TREPR_0652 5f5c2d67e0d5aef20483d8ebc54b9b3c 133 Gene3D G3DSA:1.10.10.1820 1 121 7.9E-44 T 13-10-2018 TREPR_1479 f93934fa10c18db61bcb81197d3dd75b 95 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 94 19.271 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TREPR_1479 f93934fa10c18db61bcb81197d3dd75b 95 Pfam PF00276 Ribosomal protein L23 6 90 1.2E-27 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TREPR_1479 f93934fa10c18db61bcb81197d3dd75b 95 Gene3D G3DSA:3.30.70.330 1 95 2.4E-30 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TREPR_1479 f93934fa10c18db61bcb81197d3dd75b 95 SUPERFAMILY SSF54189 6 94 1.62E-25 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_3483 af3984596348a3f46f4dd2d28d779b01 348 Pfam PF07238 PilZ domain 214 322 2.7E-7 T 13-10-2018 IPR009875 PilZ domain GO:0035438 TREPR_2729 27b3792b8091b18a615b3b490123ba9b 113 SUPERFAMILY SSF69754 1 98 4.32E-15 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like TREPR_2729 27b3792b8091b18a615b3b490123ba9b 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 94 2.0E-11 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TREPR_2729 27b3792b8091b18a615b3b490123ba9b 113 Gene3D G3DSA:3.30.160.100 1 95 3.7E-14 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like TREPR_2724 4c07d85526ad8a4b9991cfd61a0783da 396 Gene3D G3DSA:3.40.640.10 62 244 1.8E-142 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_2724 4c07d85526ad8a4b9991cfd61a0783da 396 Gene3D G3DSA:3.90.1150.10 6 379 1.8E-142 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_2724 4c07d85526ad8a4b9991cfd61a0783da 396 SUPERFAMILY SSF53383 4 383 1.97E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_2724 4c07d85526ad8a4b9991cfd61a0783da 396 PIRSF PIRSF005572 3 390 1.0E-130 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TREPR_2724 4c07d85526ad8a4b9991cfd61a0783da 396 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TREPR_2724 4c07d85526ad8a4b9991cfd61a0783da 396 Pfam PF00266 Aminotransferase class-V 6 374 2.3E-79 T 13-10-2018 IPR000192 Aminotransferase class V domain TREPR_2724 4c07d85526ad8a4b9991cfd61a0783da 396 Gene3D G3DSA:1.10.260.50 17 288 1.8E-142 T 13-10-2018 TREPR_3034 fabc504dcfca36c9a274ed88479593ac 478 Pfam PF17239 Family of unknown function (DUF5312) 89 467 4.1E-6 T 13-10-2018 IPR035196 Protein of unknown function DUF5312 TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 Gene3D G3DSA:2.160.20.20 871 1152 1.8E-5 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 171 193 5100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 1009 1034 8400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 1092 1113 5100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 911 932 370.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 939 960 260.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 961 986 8500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 885 906 840.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 586 611 10000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 1039 1060 35.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 827 855 1000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 1065 1086 2200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2784 deb5ef30a1604148991c954aa2a41547 1174 SMART SM00710 860 880 360.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2482 66c769db573ee2adefb51c574364d8ad 248 SMART SM00387 153 245 5.5E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_2482 66c769db573ee2adefb51c574364d8ad 248 SUPERFAMILY SSF55874 119 242 2.46E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_2482 66c769db573ee2adefb51c574364d8ad 248 Gene3D G3DSA:3.30.565.10 123 244 1.8E-23 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3213 a5f1a9ee1f85f0de74d441091bd20544 153 Pfam PF12953 Domain of unknown function (DUF3842) 5 136 1.5E-47 T 13-10-2018 IPR024208 Protein of unknown function DUF3842 TREPR_2135 e87a66f76cda5c3edfeef21ffa62d66d 332 Pfam PF09084 NMT1/THI5 like 49 257 1.7E-16 T 13-10-2018 IPR015168 SsuA/THI5-like TREPR_2135 e87a66f76cda5c3edfeef21ffa62d66d 332 Gene3D G3DSA:3.40.190.10 34 146 9.2E-9 T 13-10-2018 TREPR_2135 e87a66f76cda5c3edfeef21ffa62d66d 332 SUPERFAMILY SSF53850 34 258 2.34E-26 T 13-10-2018 TREPR_2135 e87a66f76cda5c3edfeef21ffa62d66d 332 Gene3D G3DSA:3.40.190.10 147 316 9.2E-18 T 13-10-2018 TREPR_3205 2ba0a384de699a0e69c11d40be0ae566 353 SUPERFAMILY SSF53383 9 347 3.09E-76 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3205 2ba0a384de699a0e69c11d40be0ae566 353 Gene3D G3DSA:3.40.640.10 38 260 5.6E-100 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3205 2ba0a384de699a0e69c11d40be0ae566 353 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 352 51.125 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 TREPR_3205 2ba0a384de699a0e69c11d40be0ae566 353 Pfam PF00155 Aminotransferase class I and II 26 346 4.8E-55 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TREPR_3205 2ba0a384de699a0e69c11d40be0ae566 353 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 TREPR_3205 2ba0a384de699a0e69c11d40be0ae566 353 Gene3D G3DSA:3.90.1150.10 21 342 5.6E-100 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3205 2ba0a384de699a0e69c11d40be0ae566 353 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 351 1.6E-83 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 TREPR_0106 2edbdba9da52aa4fd72547dfea05efb9 196 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 79 4.8E-13 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TREPR_0106 2edbdba9da52aa4fd72547dfea05efb9 196 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TREPR_0106 2edbdba9da52aa4fd72547dfea05efb9 196 PIRSF PIRSF000847 1 195 1.4E-36 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TREPR_0106 2edbdba9da52aa4fd72547dfea05efb9 196 Gene3D G3DSA:1.20.120.1760 4 187 1.0E-9 T 13-10-2018 TREPR_0106 2edbdba9da52aa4fd72547dfea05efb9 196 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 192 1.0E-32 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TREPR_1147 d7b7b2ee492187e0139cc4792bbbd76b 359 Pfam PF01992 ATP synthase (C/AC39) subunit 50 351 5.7E-18 T 13-10-2018 IPR002843 ATPase, V0 complex, c/d subunit Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1147 d7b7b2ee492187e0139cc4792bbbd76b 359 SUPERFAMILY SSF103486 47 355 3.92E-12 T 13-10-2018 IPR036079 V-type ATP synthase subunit C-like Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_2087 8986c8526349c28f43a1dc67096f7c4e 90 Pfam PF12728 Helix-turn-helix domain 4 53 1.1E-6 T 13-10-2018 TREPR_2087 8986c8526349c28f43a1dc67096f7c4e 90 SUPERFAMILY SSF46955 3 55 3.48E-9 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily TREPR_0701 0e468b0fca22ed2aa9ed5f094b101dd9 187 Pfam PF13310 Virulence protein RhuM family 64 140 4.2E-23 T 13-10-2018 IPR011204 Virulence protein RhuM-like TREPR_2864 be20b240fb629f7188107dd814948472 145 Pfam PF03963 Flagellar hook capping protein - N-terminal region 30 83 1.5E-20 T 13-10-2018 IPR005648 Flagellar hook capping protein TREPR_0391 223f0c1ca909620711cb5ffe3fb48cae 440 Gene3D G3DSA:3.90.226.30 5 430 3.8E-125 T 13-10-2018 TREPR_0391 223f0c1ca909620711cb5ffe3fb48cae 440 Pfam PF09861 Domain of unknown function (DUF2088) 7 220 8.5E-57 T 13-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 TREPR_0391 223f0c1ca909620711cb5ffe3fb48cae 440 Gene3D G3DSA:3.40.50.11440 29 282 3.8E-125 T 13-10-2018 TREPR_1377 4a44451eaf2b14513386ebbf096d37bf 533 PIRSF PIRSF002741 6 533 2.9E-100 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_1377 4a44451eaf2b14513386ebbf096d37bf 533 Gene3D G3DSA:3.90.76.10 74 216 1.9E-112 T 13-10-2018 TREPR_1377 4a44451eaf2b14513386ebbf096d37bf 533 Gene3D G3DSA:3.10.105.10 298 508 1.9E-112 T 13-10-2018 TREPR_1377 4a44451eaf2b14513386ebbf096d37bf 533 SUPERFAMILY SSF53850 46 529 1.27E-112 T 13-10-2018 TREPR_1377 4a44451eaf2b14513386ebbf096d37bf 533 Gene3D G3DSA:3.40.190.10 217 517 1.9E-112 T 13-10-2018 TREPR_1377 4a44451eaf2b14513386ebbf096d37bf 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 448 2.0E-81 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_0169 473326d2f1e1ba10de13131617d87485 353 Gene3D G3DSA:3.40.190.10 131 237 6.6E-34 T 13-10-2018 TREPR_0169 473326d2f1e1ba10de13131617d87485 353 Pfam PF09084 NMT1/THI5 like 76 274 1.8E-14 T 13-10-2018 IPR015168 SsuA/THI5-like TREPR_0169 473326d2f1e1ba10de13131617d87485 353 SUPERFAMILY SSF53850 44 305 6.03E-23 T 13-10-2018 TREPR_0169 473326d2f1e1ba10de13131617d87485 353 Gene3D G3DSA:3.40.190.10 55 346 6.6E-34 T 13-10-2018 TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 SMART SM01403 7 101 4.2E-56 T 13-10-2018 IPR027486 Ribosomal protein S10 domain TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.1E-45 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.72 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 5.1E-36 T 13-10-2018 IPR027486 Ribosomal protein S10 domain TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 Gene3D G3DSA:3.30.70.600 1 102 8.8E-38 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TREPR_1476 94574cacfeb446eb1fd9dd1bf08adc72 102 SUPERFAMILY SSF54999 5 101 2.49E-37 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TREPR_2706 ee2bb0b342b2971223ec5b280c8c0b40 451 PIRSF PIRSF006603 1 450 6.3E-100 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2706 ee2bb0b342b2971223ec5b280c8c0b40 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 417 1.9E-71 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2706 ee2bb0b342b2971223ec5b280c8c0b40 451 Pfam PF01554 MatE 27 188 5.3E-27 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2706 ee2bb0b342b2971223ec5b280c8c0b40 451 Pfam PF01554 MatE 249 410 2.1E-23 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0324 d2b3361e9989a2dbd7b80f01b7526ed8 145 Pfam PF01850 PIN domain 16 137 1.2E-14 T 13-10-2018 IPR002716 PIN domain TREPR_0324 d2b3361e9989a2dbd7b80f01b7526ed8 145 Gene3D G3DSA:3.40.50.1010 11 145 8.9E-38 T 13-10-2018 TREPR_0324 d2b3361e9989a2dbd7b80f01b7526ed8 145 SUPERFAMILY SSF88723 14 144 6.17E-36 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_2740 e0866219184ca0d8b6712ddfd3c7b527 409 Pfam PF13173 AAA domain 24 153 1.5E-32 T 13-10-2018 TREPR_2740 e0866219184ca0d8b6712ddfd3c7b527 409 SUPERFAMILY SSF52540 4 209 7.09E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2740 e0866219184ca0d8b6712ddfd3c7b527 409 Gene3D G3DSA:3.40.50.300 1 84 9.4E-6 T 13-10-2018 TREPR_3272 4eabd78112296e08197791bcffda8edb 355 Gene3D G3DSA:1.10.3470.10 14 354 9.1E-97 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_3272 4eabd78112296e08197791bcffda8edb 355 SUPERFAMILY SSF81345 12 350 6.41E-77 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_3272 4eabd78112296e08197791bcffda8edb 355 Pfam PF01032 FecCD transport family 28 350 1.0E-85 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TREPR_2878 092bdccdb7b94f15565983ad11af72f2 345 SMART SM00852 178 311 3.6E-20 T 13-10-2018 IPR001453 MoaB/Mog domain TREPR_2878 092bdccdb7b94f15565983ad11af72f2 345 Pfam PF00994 Probable molybdopterin binding domain 178 309 1.6E-21 T 13-10-2018 IPR001453 MoaB/Mog domain TREPR_2878 092bdccdb7b94f15565983ad11af72f2 345 Gene3D G3DSA:3.40.980.10 155 313 8.9E-26 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily TREPR_2878 092bdccdb7b94f15565983ad11af72f2 345 SUPERFAMILY SSF53218 176 315 3.4E-30 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily TREPR_0754 d319bc9bcad4752402a0376951332bf7 191 Pfam PF10050 Predicted metal-binding protein (DUF2284) 34 189 8.0E-41 T 13-10-2018 IPR019271 Protein of unknown function DUF2284, metal-binding TREPR_1491 b5e981003e9f0b03e1b332a9ca449a4f 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.869 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1491 b5e981003e9f0b03e1b332a9ca449a4f 132 Gene3D G3DSA:3.30.1370.30 4 77 1.3E-29 T 13-10-2018 TREPR_1491 b5e981003e9f0b03e1b332a9ca449a4f 132 Pfam PF00410 Ribosomal protein S8 5 132 7.4E-51 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1491 b5e981003e9f0b03e1b332a9ca449a4f 132 Gene3D G3DSA:3.30.1490.10 78 132 1.0E-23 T 13-10-2018 TREPR_1491 b5e981003e9f0b03e1b332a9ca449a4f 132 SUPERFAMILY SSF56047 3 132 3.27E-45 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TREPR_1810 c9c523df7c8e7e4c0a3a425744cea482 101 Pfam PF04221 RelB antitoxin 7 75 1.4E-13 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TREPR_1810 c9c523df7c8e7e4c0a3a425744cea482 101 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 71 6.8E-17 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TREPR_1810 c9c523df7c8e7e4c0a3a425744cea482 101 Gene3D G3DSA:1.10.1220.10 5 78 1.6E-12 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TREPR_1091 d1c0604d9422486a16ddbdd41ceebb8b 402 Gene3D G3DSA:2.60.120.10 13 236 6.8E-11 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_1091 d1c0604d9422486a16ddbdd41ceebb8b 402 SUPERFAMILY SSF51182 14 344 4.45E-33 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_0544 f946880e6123bb66264216876c9b1cae 271 Pfam PF01261 Xylose isomerase-like TIM barrel 166 213 4.3E-7 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TREPR_0544 f946880e6123bb66264216876c9b1cae 271 SUPERFAMILY SSF51658 145 251 5.39E-14 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily TREPR_0544 f946880e6123bb66264216876c9b1cae 271 Gene3D G3DSA:3.20.20.150 50 269 1.8E-13 T 13-10-2018 TREPR_1754 012fb406c2366f54cb587b07868e832d 169 Pfam PF02576 RimP N-terminal domain 26 98 1.3E-11 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal TREPR_1754 012fb406c2366f54cb587b07868e832d 169 SUPERFAMILY SSF75420 21 98 5.49E-10 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily TREPR_1754 012fb406c2366f54cb587b07868e832d 169 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 20 163 14.896 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 TREPR_0021 ec250537d4ccf2ff196e7b7fae63b224 258 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 17 97 1.1E-13 T 13-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif TREPR_0021 ec250537d4ccf2ff196e7b7fae63b224 258 Gene3D G3DSA:3.90.550.20 1 226 1.0E-31 T 13-10-2018 TREPR_0021 ec250537d4ccf2ff196e7b7fae63b224 258 SUPERFAMILY SSF53448 1 230 9.94E-55 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0230 f52c0c3d6c431f46fb7d667008f3816d 323 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 19 229 5.5E-48 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 TREPR_1047 03a455c20e225e11b962398aa42d3ee2 189 SUPERFAMILY SSF46689 7 76 6.67E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TREPR_1047 03a455c20e225e11b962398aa42d3ee2 189 SUPERFAMILY SSF48498 82 186 3.51E-13 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TREPR_1047 03a455c20e225e11b962398aa42d3ee2 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.8E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1047 03a455c20e225e11b962398aa42d3ee2 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.8E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_1047 03a455c20e225e11b962398aa42d3ee2 189 Gene3D G3DSA:1.10.357.10 9 189 1.1E-39 T 13-10-2018 TREPR_1047 03a455c20e225e11b962398aa42d3ee2 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.8E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TREPR_0356 03f411e551b2bef9dbe7f437c11037f2 488 Pfam PF10531 SLBB domain 388 424 0.012 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0356 03f411e551b2bef9dbe7f437c11037f2 488 Pfam PF10531 SLBB domain 207 262 4.1E-6 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0356 03f411e551b2bef9dbe7f437c11037f2 488 Gene3D G3DSA:3.10.560.10 118 202 5.4E-8 T 13-10-2018 TREPR_0356 03f411e551b2bef9dbe7f437c11037f2 488 Gene3D G3DSA:3.10.560.10 203 287 1.1E-8 T 13-10-2018 TREPR_0327 75432de614310a00fa61f9e3181be6b8 132 SUPERFAMILY SSF51182 4 129 4.61E-37 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_0327 75432de614310a00fa61f9e3181be6b8 132 Gene3D G3DSA:2.60.120.10 1 132 1.2E-47 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_0327 75432de614310a00fa61f9e3181be6b8 132 Pfam PF05523 WxcM-like, C-terminal 4 131 9.3E-49 T 13-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 TREPR_3226 25557919f29bf448181e21bded8a5d41 341 Gene3D G3DSA:3.30.70.1140 1 77 2.4E-26 T 13-10-2018 TREPR_3226 25557919f29bf448181e21bded8a5d41 341 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 93 330 1.3E-109 T 13-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 TREPR_3226 25557919f29bf448181e21bded8a5d41 341 SUPERFAMILY SSF51569 1 335 1.01E-104 T 13-10-2018 TREPR_3226 25557919f29bf448181e21bded8a5d41 341 Gene3D G3DSA:3.20.20.70 78 340 7.0E-92 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3226 25557919f29bf448181e21bded8a5d41 341 Pfam PF00793 DAHP synthetase I family 95 332 6.8E-70 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TREPR_0621 a9d1890c08c69985b2087b861f6de047 343 Pfam PF13280 WYL domain 149 324 6.6E-23 T 13-10-2018 IPR026881 WYL domain TREPR_0621 a9d1890c08c69985b2087b861f6de047 343 Gene3D G3DSA:1.10.10.10 2 71 4.5E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0237 6f90728be29cc2272612fc317c873665 289 Pfam PF01988 VIT family 138 197 3.2E-10 T 13-10-2018 IPR008217 Ccc1 family TREPR_0237 6f90728be29cc2272612fc317c873665 289 SUPERFAMILY SSF47240 17 129 5.72E-10 T 13-10-2018 IPR009078 Ferritin-like superfamily TREPR_3008 ffa3786af161f8eaa3cefa0b4172f369 152 Pfam PF04519 Polymer-forming cytoskeletal 13 109 1.4E-21 T 13-10-2018 IPR007607 Bactofilin A/B TREPR_1802 31e4810cd7db8bdfeed6ba36253bad55 132 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 98 7.1E-15 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TREPR_1802 31e4810cd7db8bdfeed6ba36253bad55 132 Gene3D G3DSA:3.40.140.10 1 130 2.9E-46 T 13-10-2018 TREPR_1802 31e4810cd7db8bdfeed6ba36253bad55 132 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 4 124 5.2E-40 T 13-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 TREPR_1802 31e4810cd7db8bdfeed6ba36253bad55 132 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TREPR_1802 31e4810cd7db8bdfeed6ba36253bad55 132 SUPERFAMILY SSF53927 1 124 3.68E-41 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TREPR_0098 aebf1fe608af0003c9cdc11de428e3bf 200 Pfam PF04754 Putative transposase, YhgA-like 8 197 2.0E-22 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like TREPR_3219 2bb323b0f5c9bee73175c835fd809fac 348 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 42 317 4.7E-86 T 13-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 TREPR_3219 2bb323b0f5c9bee73175c835fd809fac 348 Gene3D G3DSA:3.40.190.10 147 340 7.8E-101 T 13-10-2018 TREPR_3219 2bb323b0f5c9bee73175c835fd809fac 348 Gene3D G3DSA:3.40.190.10 46 321 7.8E-101 T 13-10-2018 TREPR_3219 2bb323b0f5c9bee73175c835fd809fac 348 Pfam PF13343 Bacterial extracellular solute-binding protein 98 319 5.7E-21 T 13-10-2018 TREPR_3219 2bb323b0f5c9bee73175c835fd809fac 348 SUPERFAMILY SSF53850 42 341 1.38E-58 T 13-10-2018 TREPR_2332 97f368733d4b964dcddc26ec69da2591 286 Gene3D G3DSA:3.40.190.10 118 233 1.8E-69 T 13-10-2018 TREPR_2332 97f368733d4b964dcddc26ec69da2591 286 SUPERFAMILY SSF53850 37 284 1.45E-54 T 13-10-2018 TREPR_2332 97f368733d4b964dcddc26ec69da2591 286 Pfam PF03180 NLPA lipoprotein 37 284 9.5E-55 T 13-10-2018 IPR004872 Lipoprotein NlpA family TREPR_2332 97f368733d4b964dcddc26ec69da2591 286 Gene3D G3DSA:3.40.190.10 38 272 1.8E-69 T 13-10-2018 TREPR_3362 0cb900b997bc92407da228b67ddd8a9b 345 SUPERFAMILY SSF51395 5 310 1.28E-53 T 13-10-2018 TREPR_3362 0cb900b997bc92407da228b67ddd8a9b 345 Gene3D G3DSA:3.20.20.70 2 241 2.5E-62 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_3362 0cb900b997bc92407da228b67ddd8a9b 345 Pfam PF01207 Dihydrouridine synthase (Dus) 6 246 9.8E-56 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TREPR_2844 eaea032247724aaeeadd108fdf5184c0 656 SMART SM01245 25 76 1.9E-12 T 13-10-2018 IPR032782 Jag, N-terminal TREPR_2844 eaea032247724aaeeadd108fdf5184c0 656 Pfam PF14804 Jag N-terminus 27 74 9.7E-14 T 13-10-2018 IPR032782 Jag, N-terminal TREPR_2844 eaea032247724aaeeadd108fdf5184c0 656 Gene3D G3DSA:3.30.30.80 18 76 1.6E-13 T 13-10-2018 IPR038247 Jag, N-terminal domain superfamily TREPR_2844 eaea032247724aaeeadd108fdf5184c0 656 Pfam PF03961 Flagellar Assembly Protein A 182 632 5.8E-127 T 13-10-2018 IPR005646 Flagellar assembly protein A TREPR_0455 22febd27f2bf772c11869d6d23a49e76 209 SMART SM01160 37 136 2.1E-7 T 13-10-2018 TREPR_0455 22febd27f2bf772c11869d6d23a49e76 209 Pfam PF01694 Rhomboid family 48 196 7.0E-34 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TREPR_0455 22febd27f2bf772c11869d6d23a49e76 209 SUPERFAMILY SSF144091 11 196 1.7E-40 T 13-10-2018 TREPR_0455 22febd27f2bf772c11869d6d23a49e76 209 Gene3D G3DSA:1.20.1540.10 7 202 1.0E-34 T 13-10-2018 IPR035952 Rhomboid-like superfamily TREPR_2680 222f28d36b0777a6d9da9eeb16ac918f 459 SUPERFAMILY SSF52540 195 448 3.99E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2680 222f28d36b0777a6d9da9eeb16ac918f 459 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 457 5.0E-147 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 TREPR_2680 222f28d36b0777a6d9da9eeb16ac918f 459 Gene3D G3DSA:1.10.860.10 16 175 9.7E-48 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal TREPR_2680 222f28d36b0777a6d9da9eeb16ac918f 459 Pfam PF03796 DnaB-like helicase C terminal domain 196 454 2.1E-92 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 TREPR_2680 222f28d36b0777a6d9da9eeb16ac918f 459 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 1.7E-29 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 TREPR_2680 222f28d36b0777a6d9da9eeb16ac918f 459 SUPERFAMILY SSF48024 20 130 4.32E-31 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 TREPR_2680 222f28d36b0777a6d9da9eeb16ac918f 459 SMART SM00382 213 410 0.0013 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2680 222f28d36b0777a6d9da9eeb16ac918f 459 Gene3D G3DSA:3.40.50.300 176 459 6.6E-96 T 13-10-2018 TREPR_1223 4ed5e15d91c3012d8cb7f858e2e22c26 176 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 7 159 2.0E-58 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1223 4ed5e15d91c3012d8cb7f858e2e22c26 176 Gene3D G3DSA:3.30.70.640 5 166 5.1E-63 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1223 4ed5e15d91c3012d8cb7f858e2e22c26 176 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 5 165 34.23 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1223 4ed5e15d91c3012d8cb7f858e2e22c26 176 SUPERFAMILY SSF55040 14 162 8.63E-57 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_1223 4ed5e15d91c3012d8cb7f858e2e22c26 176 Pfam PF01967 MoaC family 18 157 2.2E-53 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TREPR_3446 33a54ae1819c96b1cff182e4f34e8afc 382 Pfam PF00535 Glycosyl transferase family 2 51 224 8.1E-27 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_3446 33a54ae1819c96b1cff182e4f34e8afc 382 SUPERFAMILY SSF53448 42 256 1.77E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3446 33a54ae1819c96b1cff182e4f34e8afc 382 Gene3D G3DSA:3.90.550.10 34 259 4.5E-39 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3568 cb071dbce96eed0389786bd0aaa5422d 360 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 169 320 1.0E-7 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_3568 cb071dbce96eed0389786bd0aaa5422d 360 Gene3D G3DSA:3.20.20.210 28 354 1.1E-29 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_3568 cb071dbce96eed0389786bd0aaa5422d 360 SUPERFAMILY SSF51726 66 329 8.55E-19 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_2351 a0361a0fc941c465caa41ff5743bc2be 400 SUPERFAMILY SSF101898 20 255 6.54E-9 T 13-10-2018 TREPR_0932 62a5ea0247e0b81b3142aa4ad82d5135 327 Gene3D G3DSA:3.40.50.300 3 326 4.0E-98 T 13-10-2018 TREPR_0932 62a5ea0247e0b81b3142aa4ad82d5135 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 228 320 3.5E-20 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0932 62a5ea0247e0b81b3142aa4ad82d5135 327 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0932 62a5ea0247e0b81b3142aa4ad82d5135 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 292 3.5E-13 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0932 62a5ea0247e0b81b3142aa4ad82d5135 327 SMART SM00382 35 227 1.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0932 62a5ea0247e0b81b3142aa4ad82d5135 327 SUPERFAMILY SSF52540 5 248 4.38E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0932 62a5ea0247e0b81b3142aa4ad82d5135 327 Pfam PF00005 ABC transporter 27 177 1.2E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_3430 7f6495c25a9a0606945d4627ac9d6b6f 301 SUPERFAMILY SSF55073 141 299 3.69E-46 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_3430 7f6495c25a9a0606945d4627ac9d6b6f 301 SMART SM00267 125 301 1.2E-60 T 13-10-2018 IPR000160 GGDEF domain TREPR_3430 7f6495c25a9a0606945d4627ac9d6b6f 301 SUPERFAMILY SSF52172 7 142 5.12E-37 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3430 7f6495c25a9a0606945d4627ac9d6b6f 301 Gene3D G3DSA:3.40.50.2300 2 126 8.0E-34 T 13-10-2018 TREPR_3430 7f6495c25a9a0606945d4627ac9d6b6f 301 Pfam PF00990 Diguanylate cyclase, GGDEF domain 138 297 1.7E-48 T 13-10-2018 IPR000160 GGDEF domain TREPR_3430 7f6495c25a9a0606945d4627ac9d6b6f 301 SMART SM00448 7 119 1.4E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3430 7f6495c25a9a0606945d4627ac9d6b6f 301 Pfam PF00072 Response regulator receiver domain 10 118 4.4E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3430 7f6495c25a9a0606945d4627ac9d6b6f 301 Gene3D G3DSA:3.30.70.270 127 301 1.2E-55 T 13-10-2018 TREPR_3430 7f6495c25a9a0606945d4627ac9d6b6f 301 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 299 5.1E-49 T 13-10-2018 IPR000160 GGDEF domain TREPR_1149 0c0261e27702f16fceaa3b8bc635d2ec 103 Pfam PF00137 ATP synthase subunit C 41 100 3.9E-14 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TREPR_1149 0c0261e27702f16fceaa3b8bc635d2ec 103 SUPERFAMILY SSF81333 37 101 9.68E-14 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TREPR_1149 0c0261e27702f16fceaa3b8bc635d2ec 103 Gene3D G3DSA:1.20.120.610 1 102 3.3E-12 T 13-10-2018 TREPR_1353 eff28b668883f7cfd387aa1272a02206 256 Gene3D G3DSA:3.40.50.300 4 254 3.0E-79 T 13-10-2018 TREPR_1353 eff28b668883f7cfd387aa1272a02206 256 PIRSF PIRSF039085 5 251 2.8E-104 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TREPR_1353 eff28b668883f7cfd387aa1272a02206 256 SMART SM00382 33 223 1.4E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1353 eff28b668883f7cfd387aa1272a02206 256 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1353 eff28b668883f7cfd387aa1272a02206 256 Pfam PF00005 ABC transporter 24 175 3.0E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1353 eff28b668883f7cfd387aa1272a02206 256 SUPERFAMILY SSF52540 8 245 1.61E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1583 151a88b573b559f2c762463976f6ff46 906 Gene3D G3DSA:1.10.3810.10 50 248 7.8E-64 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_1583 151a88b573b559f2c762463976f6ff46 906 SUPERFAMILY SSF56601 214 779 3.12E-107 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TREPR_1583 151a88b573b559f2c762463976f6ff46 906 SUPERFAMILY SSF53955 46 249 6.19E-65 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily TREPR_1583 151a88b573b559f2c762463976f6ff46 906 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 68 724 1.7E-181 T 13-10-2018 TREPR_1583 151a88b573b559f2c762463976f6ff46 906 Pfam PF00905 Penicillin binding protein transpeptidase domain 415 716 3.7E-21 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TREPR_1583 151a88b573b559f2c762463976f6ff46 906 Gene3D G3DSA:3.40.710.10 391 780 1.5E-93 T 13-10-2018 TREPR_1583 151a88b573b559f2c762463976f6ff46 906 Gene3D G3DSA:3.40.710.10 260 336 9.6E-7 T 13-10-2018 TREPR_1583 151a88b573b559f2c762463976f6ff46 906 Pfam PF00912 Transglycosylase 57 232 2.3E-55 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_0593 ff1738bbbc91d53d71d97a7b23dc614b 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 150 1.1E-20 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TREPR_3340 3f09a931303be3b4e4ae18dbc668b763 232 SUPERFAMILY SSF161098 17 212 6.15E-30 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3340 3f09a931303be3b4e4ae18dbc668b763 232 Gene3D G3DSA:1.10.3720.10 4 226 7.5E-41 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3340 3f09a931303be3b4e4ae18dbc668b763 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 118 3.7E-20 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TREPR_3340 3f09a931303be3b4e4ae18dbc668b763 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 223 1.7E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 SUPERFAMILY SSF46785 1 57 1.11E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 Pfam PF00455 DeoR C terminal sensor domain 69 227 2.3E-41 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 SMART SM00420 4 56 3.3E-13 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 Pfam PF08220 DeoR-like helix-turn-helix domain 4 54 2.2E-14 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 SMART SM01134 67 229 3.4E-46 T 13-10-2018 TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 Gene3D G3DSA:1.10.10.10 1 66 8.9E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 SUPERFAMILY SSF100950 69 229 3.1E-28 T 13-10-2018 IPR037171 NagB/RpiA transferase-like TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 1.2E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 1.2E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TREPR_0131 a2dcea3ba448c16431056f50c6d7ce74 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 3 96 3.6E-36 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 3 265 1.2E-103 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 145 154 2.0E-39 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 101 114 2.0E-39 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 61 79 2.0E-39 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 82 98 2.0E-39 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 117 130 2.0E-39 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 36 47 2.0E-39 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 SUPERFAMILY SSF52096 7 264 1.01E-82 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 264 36.271 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TREPR_0988 a3b703504d4343d93c16c0c70ea4de50 266 Gene3D G3DSA:3.90.226.10 1 266 3.8E-92 T 13-10-2018 TREPR_2882 1213022587e7ac2ca433de5a17b24c9d 102 Gene3D G3DSA:3.40.30.10 4 102 4.5E-23 T 13-10-2018 TREPR_2882 1213022587e7ac2ca433de5a17b24c9d 102 SUPERFAMILY SSF52833 4 100 2.68E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_0827 89243ed82ee2b3f0a68dfd97ab129975 341 SMART SM00382 35 241 4.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0827 89243ed82ee2b3f0a68dfd97ab129975 341 SUPERFAMILY SSF52540 7 253 7.76E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0827 89243ed82ee2b3f0a68dfd97ab129975 341 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0827 89243ed82ee2b3f0a68dfd97ab129975 341 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 281 337 1.8E-10 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_0827 89243ed82ee2b3f0a68dfd97ab129975 341 Pfam PF00005 ABC transporter 27 182 7.4E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0827 89243ed82ee2b3f0a68dfd97ab129975 341 Gene3D G3DSA:3.40.50.300 4 340 8.9E-85 T 13-10-2018 TREPR_0827 89243ed82ee2b3f0a68dfd97ab129975 341 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 319 2.5E-10 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1416 631d7b6220bc9887c52b4166079cc539 640 Gene3D G3DSA:1.25.40.10 538 640 3.5E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1416 631d7b6220bc9887c52b4166079cc539 640 Pfam PF13432 Tetratricopeptide repeat 565 624 1.5E-7 T 13-10-2018 TREPR_1416 631d7b6220bc9887c52b4166079cc539 640 SUPERFAMILY SSF48452 559 639 7.96E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3433 c8bc00400b57f3caaba77588b8bda9ec 243 PIRSF PIRSF006232 1 239 1.2E-50 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 TREPR_3433 c8bc00400b57f3caaba77588b8bda9ec 243 Gene3D G3DSA:2.60.120.10 11 134 9.8E-75 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_3433 c8bc00400b57f3caaba77588b8bda9ec 243 Gene3D G3DSA:2.60.120.10 137 227 9.8E-75 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_3433 c8bc00400b57f3caaba77588b8bda9ec 243 Pfam PF02678 Pirin 13 118 6.6E-31 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 TREPR_3433 c8bc00400b57f3caaba77588b8bda9ec 243 SUPERFAMILY SSF51182 7 227 4.63E-64 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_2751 69dfc8fce4141d04d475890e3910c4ab 283 Pfam PF00753 Metallo-beta-lactamase superfamily 69 252 5.3E-23 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2751 69dfc8fce4141d04d475890e3910c4ab 283 SMART SM00849 70 261 4.5E-24 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2751 69dfc8fce4141d04d475890e3910c4ab 283 Gene3D G3DSA:3.60.15.10 17 283 6.9E-71 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2751 69dfc8fce4141d04d475890e3910c4ab 283 SUPERFAMILY SSF56281 60 281 9.17E-41 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_2299 906e7e9d32bb09929b9740d30f114457 641 Gene3D G3DSA:2.160.20.110 404 551 4.0E-11 T 13-10-2018 TREPR_1325 6bd48422a16fa25cb49a7d0c6035305d 94 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TREPR_1325 6bd48422a16fa25cb49a7d0c6035305d 94 Gene3D G3DSA:3.10.20.30 4 94 1.0E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily TREPR_1325 6bd48422a16fa25cb49a7d0c6035305d 94 SUPERFAMILY SSF54292 4 92 1.44E-19 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TREPR_1325 6bd48422a16fa25cb49a7d0c6035305d 94 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 85 1.3E-10 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TREPR_2428 ef2c48ded49122b915be917b1f98662a 339 SMART SM00382 46 238 2.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2428 ef2c48ded49122b915be917b1f98662a 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 325 2.0E-26 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_2428 ef2c48ded49122b915be917b1f98662a 339 SUPERFAMILY SSF52540 6 258 2.37E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2428 ef2c48ded49122b915be917b1f98662a 339 Pfam PF00005 ABC transporter 38 188 4.5E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2428 ef2c48ded49122b915be917b1f98662a 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 1.1E-16 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_2428 ef2c48ded49122b915be917b1f98662a 339 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2428 ef2c48ded49122b915be917b1f98662a 339 Gene3D G3DSA:3.40.50.300 4 332 2.7E-96 T 13-10-2018 TREPR_1227 dbdd3911abbbebc480a2039020b7182a 355 Pfam PF13303 Phosphotransferase system, EIIC 24 353 6.7E-110 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 TREPR_1441 f54bb84f486de19a71b16895e4b444aa 271 Pfam PF06452 Carbohydrate family 9 binding domain-like 25 103 8.2E-6 T 13-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 TREPR_1441 f54bb84f486de19a71b16895e4b444aa 271 SUPERFAMILY SSF49344 14 269 2.0E-27 T 13-10-2018 TREPR_1539 af6a9a3648033c0812a950c7e3951300 590 SMART SM00028 541 574 22.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1539 af6a9a3648033c0812a950c7e3951300 590 SMART SM00028 190 223 19.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1539 af6a9a3648033c0812a950c7e3951300 590 SMART SM00028 258 291 130.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1539 af6a9a3648033c0812a950c7e3951300 590 Gene3D G3DSA:1.25.40.10 163 447 8.7E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1539 af6a9a3648033c0812a950c7e3951300 590 SUPERFAMILY SSF48452 168 577 2.85E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1539 af6a9a3648033c0812a950c7e3951300 590 Gene3D G3DSA:1.25.40.10 448 589 1.3E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0290 68ff278309861c77d1a7d3b18531cec7 140 PIRSF PIRSF035652 1 118 7.4E-36 T 13-10-2018 IPR012657 23S rRNA-intervening sequence protein TREPR_0290 68ff278309861c77d1a7d3b18531cec7 140 SUPERFAMILY SSF158446 6 111 1.19E-27 T 13-10-2018 IPR036583 23S rRNA-intervening sequence superfamily TREPR_0290 68ff278309861c77d1a7d3b18531cec7 140 Pfam PF05635 23S rRNA-intervening sequence protein 8 106 3.5E-23 T 13-10-2018 IPR012657 23S rRNA-intervening sequence protein TREPR_0290 68ff278309861c77d1a7d3b18531cec7 140 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 8 114 7.9E-27 T 13-10-2018 IPR012657 23S rRNA-intervening sequence protein TREPR_0290 68ff278309861c77d1a7d3b18531cec7 140 Gene3D G3DSA:1.20.1440.60 1 116 9.2E-34 T 13-10-2018 IPR036583 23S rRNA-intervening sequence superfamily TREPR_2988 bb117a649514f7e0be1470c6661edbbd 292 Gene3D G3DSA:1.10.3720.10 52 291 1.7E-60 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2988 bb117a649514f7e0be1470c6661edbbd 292 SUPERFAMILY SSF161098 55 283 6.15E-55 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2988 bb117a649514f7e0be1470c6661edbbd 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 284 1.1E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0429 06609d31095c86ae9b7207d85e586bbb 284 SUPERFAMILY SSF161098 59 235 2.75E-18 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0429 06609d31095c86ae9b7207d85e586bbb 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 242 5.7E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0429 06609d31095c86ae9b7207d85e586bbb 284 Gene3D G3DSA:1.10.3720.10 54 250 1.2E-13 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3793 293a529ca3f34f899f5c01561b0fa67c 461 Pfam PF13084 Domain of unknown function (DUF3943) 74 157 1.3E-27 T 13-10-2018 IPR025079 Domain of unknown function DUF3943 TREPR_0914 167c17864334ff337c7b21ac22511684 402 Pfam PF00589 Phage integrase family 198 385 4.1E-15 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TREPR_0914 167c17864334ff337c7b21ac22511684 402 Pfam PF13102 Phage integrase SAM-like domain 103 180 7.0E-8 T 13-10-2018 IPR025269 Phage integrase SAM-like domain TREPR_0914 167c17864334ff337c7b21ac22511684 402 Gene3D G3DSA:1.10.150.130 68 183 3.8E-9 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal TREPR_0914 167c17864334ff337c7b21ac22511684 402 SUPERFAMILY SSF56349 106 385 2.09E-45 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_0914 167c17864334ff337c7b21ac22511684 402 Gene3D G3DSA:1.10.443.10 184 398 2.5E-29 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_0798 90641dfed15deb935ab4e13385590a0b 244 Pfam PF03591 AzlC protein 20 163 1.1E-45 T 13-10-2018 IPR011606 Branched-chain amino acid transport, permease TREPR_2444 5edec3f2d37e4934d2315db5ce407890 705 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 7 699 2.2E-244 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_2444 5edec3f2d37e4934d2315db5ce407890 705 PIRSF PIRSF001265 1 704 6.5E-270 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_2444 5edec3f2d37e4934d2315db5ce407890 705 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 3 699 24.674 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_2444 5edec3f2d37e4934d2315db5ce407890 705 Pfam PF03030 Inorganic H+ pyrophosphatase 14 694 1.2E-272 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 TREPR_1666 17fb11b39dea28e5f6c51a209d6d1b09 233 SUPERFAMILY SSF52540 4 221 4.46E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1666 17fb11b39dea28e5f6c51a209d6d1b09 233 Gene3D G3DSA:3.40.50.300 3 228 1.9E-66 T 13-10-2018 TREPR_1666 17fb11b39dea28e5f6c51a209d6d1b09 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1666 17fb11b39dea28e5f6c51a209d6d1b09 233 SMART SM00382 32 215 3.8E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1666 17fb11b39dea28e5f6c51a209d6d1b09 233 Pfam PF00005 ABC transporter 24 166 7.0E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0441 25e2316d8219232fda974081d7c50198 239 SMART SM00382 33 233 7.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0441 25e2316d8219232fda974081d7c50198 239 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0441 25e2316d8219232fda974081d7c50198 239 Gene3D G3DSA:3.40.50.300 4 239 2.8E-61 T 13-10-2018 TREPR_0441 25e2316d8219232fda974081d7c50198 239 Pfam PF00005 ABC transporter 24 167 1.5E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0441 25e2316d8219232fda974081d7c50198 239 SUPERFAMILY SSF52540 6 237 6.58E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1067 2839c232823893fab0b2063cd5c50fbb 351 Pfam PF00152 tRNA synthetases class II (D, K and N) 7 272 8.9E-26 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_1067 2839c232823893fab0b2063cd5c50fbb 351 SUPERFAMILY SSF55681 5 350 2.95E-60 T 13-10-2018 TREPR_1067 2839c232823893fab0b2063cd5c50fbb 351 Gene3D G3DSA:3.30.930.10 1 351 1.6E-78 T 13-10-2018 TREPR_1067 2839c232823893fab0b2063cd5c50fbb 351 Pfam PF00152 tRNA synthetases class II (D, K and N) 314 350 3.2E-6 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TREPR_0087 7b9167445e07cb9fddbaf09653d6bc62 286 SUPERFAMILY SSF161098 17 279 4.45E-49 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0087 7b9167445e07cb9fddbaf09653d6bc62 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 264 2.4E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0087 7b9167445e07cb9fddbaf09653d6bc62 286 Gene3D G3DSA:1.10.3720.10 14 272 1.2E-45 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3472 f45b5036382ef99f1866000ecb37e644 762 SUPERFAMILY SSF53300 264 442 6.12E-6 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_3472 f45b5036382ef99f1866000ecb37e644 762 Gene3D G3DSA:3.40.50.410 253 450 6.9E-8 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 Pfam PF00813 FliP family 76 269 3.4E-73 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 132 144 8.7E-21 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 72 81 8.7E-21 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 174 186 8.7E-21 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 264 274 8.7E-21 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 196 208 8.7E-21 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 144 158 8.7E-21 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 224 245 2.6E-62 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 203 223 2.6E-62 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 248 273 2.6E-62 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 113 132 2.6E-62 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 93 113 2.6E-62 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 74 93 2.6E-62 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 76 274 1.2E-85 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TREPR_2853 5855bbd6be4d4e94edd26646d99e8e7a 275 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 251 263 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TREPR_0156 ed74835198c58c74e4d13eee27047129 264 Gene3D G3DSA:3.20.20.140 2 226 1.1E-27 T 13-10-2018 TREPR_0156 ed74835198c58c74e4d13eee27047129 264 SUPERFAMILY SSF89550 3 217 7.85E-25 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TREPR_0156 ed74835198c58c74e4d13eee27047129 264 Pfam PF13263 PHP-associated 170 220 8.1E-5 T 13-10-2018 TREPR_1606 7bb395f17840080ee2af05ba40a4ec7f 572 SUPERFAMILY SSF143975 10 381 2.35E-113 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_1606 7bb395f17840080ee2af05ba40a4ec7f 572 Gene3D G3DSA:3.50.30.80 382 527 1.1E-48 T 13-10-2018 TREPR_1606 7bb395f17840080ee2af05ba40a4ec7f 572 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 470 481 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_1606 7bb395f17840080ee2af05ba40a4ec7f 572 SUPERFAMILY SSF52016 384 571 3.69E-50 T 13-10-2018 TREPR_1606 7bb395f17840080ee2af05ba40a4ec7f 572 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 118 128 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_1606 7bb395f17840080ee2af05ba40a4ec7f 572 Pfam PF00920 Dehydratase family 30 568 1.7E-178 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TREPR_2084 45d303734e8744abbad307039b53221b 409 Pfam PF04860 Phage portal protein 50 381 4.3E-57 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein TREPR_0768 dcd5ca7ef1fb1e75839360c53870ca11 184 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 175 13.272 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TREPR_0768 dcd5ca7ef1fb1e75839360c53870ca11 184 Pfam PF01252 Signal peptidase (SPase) II 16 168 5.3E-27 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TREPR_0768 dcd5ca7ef1fb1e75839360c53870ca11 184 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 60 68 4.9E-12 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TREPR_0768 dcd5ca7ef1fb1e75839360c53870ca11 184 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 150 166 4.9E-12 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TREPR_0768 dcd5ca7ef1fb1e75839360c53870ca11 184 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 4.9E-12 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TREPR_0768 dcd5ca7ef1fb1e75839360c53870ca11 184 ProSitePatterns PS00855 Signal peptidases II signature. 112 124 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TREPR_0768 dcd5ca7ef1fb1e75839360c53870ca11 184 TIGRFAM TIGR00077 lspA: signal peptidase II 8 173 1.2E-30 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TREPR_1968 7719430c3ff59a18589895f95eba1412 324 SUPERFAMILY SSF52283 2 129 7.94E-26 T 13-10-2018 TREPR_1968 7719430c3ff59a18589895f95eba1412 324 Gene3D G3DSA:3.40.50.720 6 303 8.2E-89 T 13-10-2018 TREPR_1968 7719430c3ff59a18589895f95eba1412 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 279 2.4E-50 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TREPR_1968 7719430c3ff59a18589895f95eba1412 324 Gene3D G3DSA:3.40.50.720 96 277 8.2E-89 T 13-10-2018 TREPR_1968 7719430c3ff59a18589895f95eba1412 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 311 1.1E-25 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TREPR_1968 7719430c3ff59a18589895f95eba1412 324 SUPERFAMILY SSF51735 96 280 8.77E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_1656 36daf2f0dbe4c83d73a3abbd092521ae 521 SUPERFAMILY SSF58104 231 497 1.14E-45 T 13-10-2018 TREPR_1656 36daf2f0dbe4c83d73a3abbd092521ae 521 SMART SM00283 232 500 1.3E-16 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1656 36daf2f0dbe4c83d73a3abbd092521ae 521 Gene3D G3DSA:1.10.287.950 205 501 1.0E-41 T 13-10-2018 TREPR_1656 36daf2f0dbe4c83d73a3abbd092521ae 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 295 465 4.3E-27 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_1656 36daf2f0dbe4c83d73a3abbd092521ae 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 443 4.6E-15 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_1656 36daf2f0dbe4c83d73a3abbd092521ae 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 395 4.6E-15 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_1656 36daf2f0dbe4c83d73a3abbd092521ae 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 263 292 4.6E-15 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_1656 36daf2f0dbe4c83d73a3abbd092521ae 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 337 364 4.6E-15 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0223 fa45200b63b4b257653a595a9fa9e8f0 508 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 9 507 1.8E-115 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TREPR_0223 fa45200b63b4b257653a595a9fa9e8f0 508 SUPERFAMILY SSF51445 14 507 1.02E-169 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_0223 fa45200b63b4b257653a595a9fa9e8f0 508 Pfam PF02446 4-alpha-glucanotransferase 21 486 2.7E-164 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TREPR_0223 fa45200b63b4b257653a595a9fa9e8f0 508 Gene3D G3DSA:3.20.20.80 10 508 9.6E-190 T 13-10-2018 TREPR_0583 c2bdd7e0e075f3d7bca857cdcd0b6e2a 66 Pfam PF00403 Heavy-metal-associated domain 5 63 8.7E-14 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TREPR_0583 c2bdd7e0e075f3d7bca857cdcd0b6e2a 66 SUPERFAMILY SSF55008 1 65 8.38E-18 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TREPR_0583 c2bdd7e0e075f3d7bca857cdcd0b6e2a 66 PRINTS PR00944 Copper ion binding protein signature 27 40 5.3E-6 T 13-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 TREPR_0583 c2bdd7e0e075f3d7bca857cdcd0b6e2a 66 PRINTS PR00944 Copper ion binding protein signature 2 14 5.3E-6 T 13-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 TREPR_0583 c2bdd7e0e075f3d7bca857cdcd0b6e2a 66 PRINTS PR00944 Copper ion binding protein signature 52 65 5.3E-6 T 13-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 TREPR_0583 c2bdd7e0e075f3d7bca857cdcd0b6e2a 66 PRINTS PR00944 Copper ion binding protein signature 14 27 5.3E-6 T 13-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 TREPR_0583 c2bdd7e0e075f3d7bca857cdcd0b6e2a 66 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TREPR_0583 c2bdd7e0e075f3d7bca857cdcd0b6e2a 66 Gene3D G3DSA:3.30.70.100 3 66 4.5E-19 T 13-10-2018 TREPR_1274 29f5e8d85068036c0c2705f6f2a6dc3e 450 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 101 117 7.1E-5 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_1274 29f5e8d85068036c0c2705f6f2a6dc3e 450 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 323 335 7.1E-5 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_1274 29f5e8d85068036c0c2705f6f2a6dc3e 450 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 151 164 7.1E-5 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_1274 29f5e8d85068036c0c2705f6f2a6dc3e 450 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 326 332 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_1274 29f5e8d85068036c0c2705f6f2a6dc3e 450 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 101 411 3.1E-21 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 TREPR_1274 29f5e8d85068036c0c2705f6f2a6dc3e 450 SUPERFAMILY SSF53335 96 407 3.32E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_1117 3e211d2662270de72642d4749644df78 114 SUPERFAMILY SSF51182 11 111 2.97E-19 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_1117 3e211d2662270de72642d4749644df78 114 Pfam PF07883 Cupin domain 43 108 3.2E-15 T 13-10-2018 IPR013096 Cupin 2, conserved barrel TREPR_1117 3e211d2662270de72642d4749644df78 114 Gene3D G3DSA:2.60.120.10 1 113 6.0E-27 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_0436 f83d7d50f1d12217075d79248d86c43e 246 SMART SM00382 27 240 0.0068 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_0436 f83d7d50f1d12217075d79248d86c43e 246 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_0436 f83d7d50f1d12217075d79248d86c43e 246 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 223 245 7.8E-8 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TREPR_0436 f83d7d50f1d12217075d79248d86c43e 246 Pfam PF00005 ABC transporter 18 173 5.5E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_0436 f83d7d50f1d12217075d79248d86c43e 246 SUPERFAMILY SSF52540 2 244 9.37E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0436 f83d7d50f1d12217075d79248d86c43e 246 Gene3D G3DSA:3.40.50.300 1 246 8.8E-55 T 13-10-2018 TREPR_1584 06bf4ac2e68cd748548c49e6752c0aae 130 Gene3D G3DSA:3.90.1530.30 11 70 6.7E-10 T 13-10-2018 TREPR_1584 06bf4ac2e68cd748548c49e6752c0aae 130 SUPERFAMILY SSF110849 4 106 6.45E-18 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TREPR_1584 06bf4ac2e68cd748548c49e6752c0aae 130 Pfam PF02195 ParB-like nuclease domain 2 84 1.0E-13 T 13-10-2018 IPR003115 ParB/Sulfiredoxin TREPR_1584 06bf4ac2e68cd748548c49e6752c0aae 130 SMART SM00470 1 85 5.3E-15 T 13-10-2018 IPR003115 ParB/Sulfiredoxin TREPR_2766 32b4acad3dbf224253e42581d19590ec 455 Gene3D G3DSA:3.40.50.2300 3 136 3.3E-18 T 13-10-2018 TREPR_2766 32b4acad3dbf224253e42581d19590ec 455 SMART SM00448 6 121 5.8E-8 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2766 32b4acad3dbf224253e42581d19590ec 455 SMART SM00448 336 447 2.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2766 32b4acad3dbf224253e42581d19590ec 455 Pfam PF00072 Response regulator receiver domain 338 446 5.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2766 32b4acad3dbf224253e42581d19590ec 455 Pfam PF00072 Response regulator receiver domain 8 121 1.7E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2766 32b4acad3dbf224253e42581d19590ec 455 Gene3D G3DSA:3.40.50.2300 327 454 5.4E-31 T 13-10-2018 TREPR_2766 32b4acad3dbf224253e42581d19590ec 455 SUPERFAMILY SSF52172 6 147 1.28E-19 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_2766 32b4acad3dbf224253e42581d19590ec 455 SUPERFAMILY SSF52172 334 451 4.13E-30 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_0826 51262b8ec563df34631089f89a7a7334 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 290 4.1E-31 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0826 51262b8ec563df34631089f89a7a7334 312 SUPERFAMILY SSF161098 86 273 3.92E-32 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0826 51262b8ec563df34631089f89a7a7334 312 Gene3D G3DSA:1.10.3720.10 82 287 9.3E-25 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1276 4f65c1f990da0b95977cbe3cc31d60bf 139 Pfam PF07977 FabA-like domain 8 130 4.4E-22 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TREPR_1276 4f65c1f990da0b95977cbe3cc31d60bf 139 SUPERFAMILY SSF54637 3 136 1.39E-39 T 13-10-2018 IPR029069 HotDog domain superfamily TREPR_1276 4f65c1f990da0b95977cbe3cc31d60bf 139 Gene3D G3DSA:3.10.129.10 1 138 2.1E-43 T 13-10-2018 TREPR_0479 e7daf15f75c4c4e19b6958e2a4235661 305 SUPERFAMILY SSF161098 90 287 5.1E-25 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0479 e7daf15f75c4c4e19b6958e2a4235661 305 Gene3D G3DSA:1.10.3720.10 83 299 4.4E-30 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0479 e7daf15f75c4c4e19b6958e2a4235661 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 2.3E-43 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3713 2826bd5958e6e501a8c0297e5e2670b5 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 TREPR_3713 2826bd5958e6e501a8c0297e5e2670b5 300 Gene3D G3DSA:3.40.50.1100 2 292 1.7E-104 T 13-10-2018 TREPR_3713 2826bd5958e6e501a8c0297e5e2670b5 300 SUPERFAMILY SSF53686 3 292 4.85E-84 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TREPR_3713 2826bd5958e6e501a8c0297e5e2670b5 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 283 6.9E-68 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TREPR_3713 2826bd5958e6e501a8c0297e5e2670b5 300 Gene3D G3DSA:3.40.50.1100 42 142 1.7E-104 T 13-10-2018 TREPR_3875 a132b177714f5bdb59f5f423dffa2550 285 SUPERFAMILY SSF55729 139 281 8.15E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_3875 a132b177714f5bdb59f5f423dffa2550 285 Pfam PF08445 FR47-like protein 217 276 1.4E-9 T 13-10-2018 IPR013653 FR47-like GO:0016747 TREPR_3875 a132b177714f5bdb59f5f423dffa2550 285 Gene3D G3DSA:3.40.630.30 89 281 3.8E-22 T 13-10-2018 TREPR_0245 d6b21d7169cb3f67fa05f6daff4ee010 282 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 32 54 4.9E-5 T 13-10-2018 TREPR_0245 d6b21d7169cb3f67fa05f6daff4ee010 282 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 210 225 4.9E-5 T 13-10-2018 TREPR_0245 d6b21d7169cb3f67fa05f6daff4ee010 282 Pfam PF00899 ThiF family 11 246 9.4E-65 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TREPR_0245 d6b21d7169cb3f67fa05f6daff4ee010 282 SUPERFAMILY SSF69572 3 260 1.7E-92 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TREPR_0245 d6b21d7169cb3f67fa05f6daff4ee010 282 Gene3D G3DSA:3.40.50.720 3 255 8.8E-90 T 13-10-2018 TREPR_2487 7604500a418c16f881cde3e496b836eb 242 Gene3D G3DSA:2.10.109.10 109 241 1.3E-21 T 13-10-2018 TREPR_2487 7604500a418c16f881cde3e496b836eb 242 SUPERFAMILY SSF51306 39 241 1.83E-29 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TREPR_2487 7604500a418c16f881cde3e496b836eb 242 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 24 236 3.9E-22 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TREPR_2487 7604500a418c16f881cde3e496b836eb 242 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 130 142 7.8E-13 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TREPR_2487 7604500a418c16f881cde3e496b836eb 242 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 196 215 7.8E-13 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TREPR_2487 7604500a418c16f881cde3e496b836eb 242 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 40 56 7.8E-13 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TREPR_2487 7604500a418c16f881cde3e496b836eb 242 ProSitePatterns PS00760 Signal peptidases I lysine active site. 132 144 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 TREPR_1247 2b02254dad2afaa12bb6047757a8608b 458 Pfam PF01554 MatE 272 412 1.1E-16 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1247 2b02254dad2afaa12bb6047757a8608b 458 Pfam PF01554 MatE 25 186 1.5E-21 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1247 2b02254dad2afaa12bb6047757a8608b 458 PIRSF PIRSF006603 3 455 4.1E-69 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1247 2b02254dad2afaa12bb6047757a8608b 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 422 7.8E-46 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_0857 05b66965014a6ce15ce7059ea38f7cb4 273 SUPERFAMILY SSF69593 37 260 2.48E-15 T 13-10-2018 TREPR_0857 05b66965014a6ce15ce7059ea38f7cb4 273 Pfam PF01553 Acyltransferase 85 206 5.2E-10 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TREPR_0857 05b66965014a6ce15ce7059ea38f7cb4 273 SMART SM00563 94 208 1.1E-9 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TREPR_1607 e433d4cd97f4c584519f2086116ec162 305 Gene3D G3DSA:3.20.20.100 1 305 2.5E-89 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_1607 e433d4cd97f4c584519f2086116ec162 305 PRINTS PR00069 Aldo-keto reductase signature 185 214 9.7E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_1607 e433d4cd97f4c584519f2086116ec162 305 PRINTS PR00069 Aldo-keto reductase signature 233 257 9.7E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_1607 e433d4cd97f4c584519f2086116ec162 305 PRINTS PR00069 Aldo-keto reductase signature 101 119 9.7E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_1607 e433d4cd97f4c584519f2086116ec162 305 PRINTS PR00069 Aldo-keto reductase signature 38 62 9.7E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TREPR_1607 e433d4cd97f4c584519f2086116ec162 305 Pfam PF00248 Aldo/keto reductase family 16 294 6.3E-56 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain TREPR_1607 e433d4cd97f4c584519f2086116ec162 305 SUPERFAMILY SSF51430 1 300 1.7E-73 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 496 645 1.0E-28 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 SMART SM00283 431 678 2.5E-52 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 Gene3D G3DSA:1.10.287.950 429 720 3.1E-48 T 13-10-2018 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 Gene3D G3DSA:1.20.1480.50 299 394 6.4E-11 T 13-10-2018 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 Pfam PF00672 HAMP domain 335 383 9.3E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 Gene3D G3DSA:3.30.450.20 59 201 1.3E-25 T 13-10-2018 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 Gene3D G3DSA:3.30.450.20 49 271 1.3E-25 T 13-10-2018 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 556 9.6E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 558 587 9.6E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 606 635 9.6E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 9.6E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 SMART SM00304 334 388 9.2E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TREPR_0494 63f4de87f5535d712edd5ef453a9023a 722 SUPERFAMILY SSF58104 356 683 6.02E-50 T 13-10-2018 TREPR_0632 c949b9f1fb1c1e213e0840f94303518e 144 SUPERFAMILY SSF46785 2 134 1.27E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0632 c949b9f1fb1c1e213e0840f94303518e 144 Gene3D G3DSA:1.10.10.10 1 144 8.3E-39 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_0632 c949b9f1fb1c1e213e0840f94303518e 144 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 4.3E-30 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type TREPR_0632 c949b9f1fb1c1e213e0840f94303518e 144 Pfam PF02082 Transcriptional regulator 1 81 2.0E-23 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type TREPR_0189 f7199d6b37c04798650f1b822d12dcc1 131 Pfam PF01850 PIN domain 3 122 3.4E-7 T 13-10-2018 IPR002716 PIN domain TREPR_0189 f7199d6b37c04798650f1b822d12dcc1 131 SUPERFAMILY SSF88723 1 120 6.17E-15 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_1651 39e6a54c0f3d484d1992a23b3d13e430 156 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 151 1.0E-30 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 TREPR_1651 39e6a54c0f3d484d1992a23b3d13e430 156 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 153 27.143 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 TREPR_1645 10fe406fea9981b67b2909a4af84869d 171 ProSitePatterns PS00938 Initiation factor 3 signature. 58 71 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 TREPR_1645 10fe406fea9981b67b2909a4af84869d 171 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 84 168 5.3E-35 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 TREPR_1645 10fe406fea9981b67b2909a4af84869d 171 SUPERFAMILY SSF55200 83 171 7.19E-31 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TREPR_1645 10fe406fea9981b67b2909a4af84869d 171 Gene3D G3DSA:3.10.20.80 2 78 2.6E-28 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TREPR_1645 10fe406fea9981b67b2909a4af84869d 171 SUPERFAMILY SSF54364 6 78 3.53E-24 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TREPR_1645 10fe406fea9981b67b2909a4af84869d 171 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 8 170 5.1E-64 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TREPR_1645 10fe406fea9981b67b2909a4af84869d 171 Gene3D G3DSA:3.30.110.10 79 171 1.3E-35 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TREPR_1645 10fe406fea9981b67b2909a4af84869d 171 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 2 170 28.719 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TREPR_1645 10fe406fea9981b67b2909a4af84869d 171 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 8 74 5.3E-27 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TREPR_0530 47c5a27f085a1a11293f197260fe8b78 167 Gene3D G3DSA:3.40.50.300 1 167 1.8E-53 T 13-10-2018 TREPR_0530 47c5a27f085a1a11293f197260fe8b78 167 SUPERFAMILY SSF52540 1 167 1.08E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0530 47c5a27f085a1a11293f197260fe8b78 167 PIRSF PIRSF015617 1 167 8.8E-46 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TREPR_0530 47c5a27f085a1a11293f197260fe8b78 167 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 1 167 7.0E-53 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TREPR_3011 ee1dc938bfee318add28ec61a078d281 247 Pfam PF13649 Methyltransferase domain 41 139 1.6E-18 T 13-10-2018 TREPR_3011 ee1dc938bfee318add28ec61a078d281 247 Gene3D G3DSA:2.20.25.110 147 204 6.3E-37 T 13-10-2018 TREPR_3011 ee1dc938bfee318add28ec61a078d281 247 SUPERFAMILY SSF53335 4 246 6.96E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_3011 ee1dc938bfee318add28ec61a078d281 247 Gene3D G3DSA:3.40.50.150 10 225 6.3E-37 T 13-10-2018 TREPR_2073 3bad714fd246227761b86ae963f91f64 421 Gene3D G3DSA:3.30.465.10 330 410 7.0E-13 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TREPR_2073 3bad714fd246227761b86ae963f91f64 421 Pfam PF01595 Domain of unknown function DUF21 14 186 3.2E-49 T 13-10-2018 IPR002550 CNNM, transmembrane domain TREPR_2073 3bad714fd246227761b86ae963f91f64 421 Pfam PF03471 Transporter associated domain 336 410 1.6E-11 T 13-10-2018 IPR005170 Transporter-associated domain TREPR_2073 3bad714fd246227761b86ae963f91f64 421 SUPERFAMILY SSF56176 332 410 2.1E-10 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TREPR_2073 3bad714fd246227761b86ae963f91f64 421 SMART SM01091 334 413 7.9E-9 T 13-10-2018 IPR005170 Transporter-associated domain TREPR_2073 3bad714fd246227761b86ae963f91f64 421 Pfam PF00571 CBS domain 268 319 3.5E-5 T 13-10-2018 IPR000644 CBS domain TREPR_2073 3bad714fd246227761b86ae963f91f64 421 SUPERFAMILY SSF54631 196 335 6.7E-28 T 13-10-2018 TREPR_2073 3bad714fd246227761b86ae963f91f64 421 Gene3D G3DSA:3.10.580.10 182 329 4.7E-49 T 13-10-2018 TREPR_2567 4df60e1c66a66060ee21fe5219cd2160 248 Gene3D G3DSA:1.25.40.10 53 235 1.1E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2567 4df60e1c66a66060ee21fe5219cd2160 248 SUPERFAMILY SSF48452 79 226 1.41E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2017 7461dd1ffd1f6b99935e900ecee45f74 434 Pfam PF05065 Phage capsid family 153 424 4.2E-26 T 13-10-2018 IPR024455 Phage capsid TREPR_2017 7461dd1ffd1f6b99935e900ecee45f74 434 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 2 423 2.1E-35 T 13-10-2018 IPR024455 Phage capsid TREPR_2017 7461dd1ffd1f6b99935e900ecee45f74 434 SUPERFAMILY SSF56563 151 424 9.42E-28 T 13-10-2018 TREPR_2572 95d52895e7cbebd5eb44a2047c3ba87d 377 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 16 371 2.4E-102 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2572 95d52895e7cbebd5eb44a2047c3ba87d 377 Pfam PF01098 Cell cycle protein 19 372 7.9E-98 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_3265 f6bde73771acb31e84d5623a2c91ba4d 429 Gene3D G3DSA:3.90.1150.10 328 429 3.2E-29 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_3265 f6bde73771acb31e84d5623a2c91ba4d 429 SUPERFAMILY SSF53383 41 413 4.83E-47 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_3265 f6bde73771acb31e84d5623a2c91ba4d 429 Gene3D G3DSA:3.40.640.10 1 326 7.6E-65 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_3265 f6bde73771acb31e84d5623a2c91ba4d 429 Pfam PF00155 Aminotransferase class I and II 66 415 1.5E-19 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TREPR_2877 2d960cd4ba7a74b2e4400cfd5e89d053 255 Pfam PF01738 Dienelactone hydrolase family 28 252 9.9E-42 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 TREPR_2877 2d960cd4ba7a74b2e4400cfd5e89d053 255 SUPERFAMILY SSF53474 14 253 3.37E-44 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_2877 2d960cd4ba7a74b2e4400cfd5e89d053 255 Gene3D G3DSA:3.40.50.1820 13 251 8.9E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1068 2da7712bbbef918bcb3cfe15420d4148 148 SMART SM00100 12 125 2.0E-17 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_1068 2da7712bbbef918bcb3cfe15420d4148 148 SUPERFAMILY SSF51206 7 137 1.7E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like TREPR_1068 2da7712bbbef918bcb3cfe15420d4148 148 Gene3D G3DSA:2.60.120.10 3 142 5.2E-28 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_1068 2da7712bbbef918bcb3cfe15420d4148 148 Pfam PF00027 Cyclic nucleotide-binding domain 31 111 2.2E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain TREPR_2080 6b29a778eadcb18e72017e4e9e27b03b 412 Pfam PF00589 Phage integrase family 185 361 1.3E-14 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TREPR_2080 6b29a778eadcb18e72017e4e9e27b03b 412 SUPERFAMILY SSF56349 84 368 5.0E-47 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_2080 6b29a778eadcb18e72017e4e9e27b03b 412 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 95 132 2.5E-6 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TREPR_2080 6b29a778eadcb18e72017e4e9e27b03b 412 Gene3D G3DSA:1.10.443.10 198 395 1.9E-24 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_2080 6b29a778eadcb18e72017e4e9e27b03b 412 Gene3D G3DSA:1.10.150.130 67 183 1.7E-20 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal TREPR_0158 5a5615477602c164e3a900b4125b3996 182 Gene3D G3DSA:2.60.120.10 80 179 2.2E-24 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_0158 5a5615477602c164e3a900b4125b3996 182 Gene3D G3DSA:1.10.260.40 5 77 8.6E-11 T 13-10-2018 TREPR_0158 5a5615477602c164e3a900b4125b3996 182 Pfam PF12844 Helix-turn-helix domain 11 71 1.0E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_0158 5a5615477602c164e3a900b4125b3996 182 Pfam PF07883 Cupin domain 112 166 2.4E-13 T 13-10-2018 IPR013096 Cupin 2, conserved barrel TREPR_0158 5a5615477602c164e3a900b4125b3996 182 SUPERFAMILY SSF51182 75 179 2.57E-24 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_0158 5a5615477602c164e3a900b4125b3996 182 SMART SM00530 11 66 5.8E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_0158 5a5615477602c164e3a900b4125b3996 182 SUPERFAMILY SSF47413 4 73 4.29E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3634 9bd5f7f1f40da08a3d92e123778079c0 82 Gene3D G3DSA:3.30.2020.10 1 79 1.4E-12 T 13-10-2018 IPR036782 NE0471-like, N-terminal TREPR_3634 9bd5f7f1f40da08a3d92e123778079c0 82 SUPERFAMILY SSF143880 1 76 2.09E-20 T 13-10-2018 IPR036782 NE0471-like, N-terminal TREPR_3634 9bd5f7f1f40da08a3d92e123778079c0 82 Pfam PF10387 Protein of unknown function (DUF2442) 7 77 1.6E-18 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 TREPR_3058 0fe857a9168337b5bd9efc074283be03 411 Pfam PF13487 HD domain 289 351 6.6E-15 T 13-10-2018 TREPR_3058 0fe857a9168337b5bd9efc074283be03 411 Pfam PF13487 HD domain 89 137 7.4E-6 T 13-10-2018 TREPR_3058 0fe857a9168337b5bd9efc074283be03 411 Gene3D G3DSA:1.10.3210.10 218 403 2.0E-42 T 13-10-2018 TREPR_3058 0fe857a9168337b5bd9efc074283be03 411 SMART SM00471 234 369 0.0034 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_3058 0fe857a9168337b5bd9efc074283be03 411 SMART SM00471 23 158 12.0 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_3058 0fe857a9168337b5bd9efc074283be03 411 SUPERFAMILY SSF109604 228 388 2.4E-23 T 13-10-2018 TREPR_3058 0fe857a9168337b5bd9efc074283be03 411 SUPERFAMILY SSF109604 15 149 1.66E-12 T 13-10-2018 TREPR_3058 0fe857a9168337b5bd9efc074283be03 411 Gene3D G3DSA:1.10.3210.10 25 173 3.1E-20 T 13-10-2018 TREPR_2382 72536f05dd527297dce19b039f72bd4f 291 Gene3D G3DSA:3.90.550.10 1 291 1.9E-76 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2382 72536f05dd527297dce19b039f72bd4f 291 SUPERFAMILY SSF53448 1 284 1.34E-82 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2382 72536f05dd527297dce19b039f72bd4f 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 288 4.2E-138 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 TREPR_2382 72536f05dd527297dce19b039f72bd4f 291 Pfam PF00483 Nucleotidyl transferase 2 241 5.1E-63 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TREPR_1302 6edac66e7060706ad64308489b9cb055 464 Pfam PF13941 MutL protein 4 456 4.4E-164 T 13-10-2018 IPR006230 Protein MutL TREPR_1302 6edac66e7060706ad64308489b9cb055 464 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 7 455 1.5E-130 T 13-10-2018 IPR006230 Protein MutL TREPR_1302 6edac66e7060706ad64308489b9cb055 464 SUPERFAMILY SSF53067 7 398 3.58E-5 T 13-10-2018 TREPR_1302 6edac66e7060706ad64308489b9cb055 464 PIRSF PIRSF004729 1 459 1.5E-149 T 13-10-2018 IPR006230 Protein MutL TREPR_3482 3fc5827880fe6b0d586564a06f499a68 224 Pfam PF02517 CAAX protease self-immunity 125 214 1.3E-14 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TREPR_1558 533227a2ef7b2fdd92526a4a4926c0f6 336 SUPERFAMILY SSF51726 3 304 1.6E-26 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1558 533227a2ef7b2fdd92526a4a4926c0f6 336 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 133 304 4.7E-16 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_1558 533227a2ef7b2fdd92526a4a4926c0f6 336 Gene3D G3DSA:3.20.20.210 1 311 5.8E-41 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 SUPERFAMILY SSF56024 298 494 3.36E-42 T 13-10-2018 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 SUPERFAMILY SSF56024 126 342 1.13E-42 T 13-10-2018 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 Pfam PF13091 PLD-like domain 354 478 2.4E-26 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 Pfam PF13091 PLD-like domain 165 302 3.5E-11 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 42 511 3.5E-97 T 13-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 Gene3D G3DSA:3.30.870.10 329 507 1.3E-29 T 13-10-2018 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 SMART SM00155 426 453 4.2E-5 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 SMART SM00155 246 273 6.2E-5 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 Gene3D G3DSA:3.30.870.10 145 325 3.9E-41 T 13-10-2018 TREPR_3876 9bdb802352b7d94e43b5dbf746490850 512 Pfam PF13396 Phospholipase_D-nuclease N-terminal 49 88 1.8E-8 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal TREPR_1763 2d02dc5e794dff0b8b626bc6f1d25dae 427 Pfam PF03739 Predicted permease YjgP/YjgQ family 19 419 1.5E-71 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TREPR_1093 5f876fd697d284dbfd817a4a5c1bce6e 733 Gene3D G3DSA:3.30.70.2230 460 618 3.1E-36 T 13-10-2018 TREPR_1093 5f876fd697d284dbfd817a4a5c1bce6e 733 TIGRFAM TIGR02578 cas_TM1811_Csm1: CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE 89 610 2.3E-86 T 13-10-2018 IPR013408 CRISPR-associated protein Csm1 TREPR_3070 790b2203d79a192dcefe97fac37bea76 231 Pfam PF12654 Domain of unknown function (DUF3786) 43 225 2.4E-54 T 13-10-2018 IPR024264 Domain of unknown function DUF3786 TREPR_3744 dc7508efd729e7fcfb8d0650cc4e1f6a 278 Pfam PF00535 Glycosyl transferase family 2 11 190 2.9E-12 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_3744 dc7508efd729e7fcfb8d0650cc4e1f6a 278 Gene3D G3DSA:3.90.550.10 1 244 7.1E-30 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3744 dc7508efd729e7fcfb8d0650cc4e1f6a 278 SUPERFAMILY SSF53448 5 254 1.25E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0231 bc0713eb7dfb3628a8c7ef516d5a1770 204 ProSitePatterns PS00194 Thioredoxin family active site. 93 111 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TREPR_0231 bc0713eb7dfb3628a8c7ef516d5a1770 204 Gene3D G3DSA:3.40.30.10 56 204 6.5E-46 T 13-10-2018 TREPR_0231 bc0713eb7dfb3628a8c7ef516d5a1770 204 SUPERFAMILY SSF52833 61 203 2.73E-42 T 13-10-2018 IPR036249 Thioredoxin-like superfamily TREPR_0231 bc0713eb7dfb3628a8c7ef516d5a1770 204 Pfam PF00578 AhpC/TSA family 70 179 2.3E-30 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TREPR_3220 f9d1788450a5ba4eb8d445848387761d 595 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 425 578 2.9E-7 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3220 f9d1788450a5ba4eb8d445848387761d 595 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 305 8.9E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3220 f9d1788450a5ba4eb8d445848387761d 595 SUPERFAMILY SSF161098 337 581 3.92E-35 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3220 f9d1788450a5ba4eb8d445848387761d 595 Gene3D G3DSA:1.10.3720.10 328 591 7.5E-33 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3220 f9d1788450a5ba4eb8d445848387761d 595 Gene3D G3DSA:1.10.3720.10 32 311 1.2E-45 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3220 f9d1788450a5ba4eb8d445848387761d 595 SUPERFAMILY SSF161098 36 307 3.27E-41 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3715 ce3ffa86753211b3ed39c75d5ebd1e07 94 SUPERFAMILY SSF54285 1 90 7.1E-18 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp TREPR_3715 ce3ffa86753211b3ed39c75d5ebd1e07 94 Gene3D G3DSA:3.10.20.30 1 90 8.3E-26 T 13-10-2018 IPR012675 Beta-grasp domain superfamily TREPR_3715 ce3ffa86753211b3ed39c75d5ebd1e07 94 Pfam PF02597 ThiS family 5 90 2.1E-12 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 TREPR_3841 0b4f08240bc74734ab8906d53fdb629f 353 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 2 313 17.633 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TREPR_3841 0b4f08240bc74734ab8906d53fdb629f 353 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 151 163 - T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TREPR_3841 0b4f08240bc74734ab8906d53fdb629f 353 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 19 307 3.3E-57 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TREPR_3841 0b4f08240bc74734ab8906d53fdb629f 353 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 8 313 1.6E-66 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TREPR_1982 57b3a2558034f0c544ca59db54307c83 349 Pfam PF13343 Bacterial extracellular solute-binding protein 82 324 2.1E-39 T 13-10-2018 TREPR_1982 57b3a2558034f0c544ca59db54307c83 349 SUPERFAMILY SSF53850 36 338 1.95E-71 T 13-10-2018 TREPR_1982 57b3a2558034f0c544ca59db54307c83 349 PIRSF PIRSF002825 1 342 1.5E-85 T 13-10-2018 IPR026045 Ferric binding protein TREPR_1982 57b3a2558034f0c544ca59db54307c83 349 Gene3D G3DSA:3.40.190.10 136 325 8.1E-103 T 13-10-2018 TREPR_1982 57b3a2558034f0c544ca59db54307c83 349 Gene3D G3DSA:3.40.190.10 38 310 8.1E-103 T 13-10-2018 TREPR_0292 15779f90c684030608bba5d4d3be9010 94 SUPERFAMILY SSF101498 2 76 1.57E-6 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily TREPR_0292 15779f90c684030608bba5d4d3be9010 94 Pfam PF04316 Anti-sigma-28 factor, FlgM 31 89 9.6E-8 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal TREPR_0667 7c268955dd410c7fb8fc5e958a8b5ed9 474 SUPERFAMILY SSF48208 57 402 1.11E-58 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TREPR_0667 7c268955dd410c7fb8fc5e958a8b5ed9 474 Gene3D G3DSA:1.50.10.10 13 368 2.0E-53 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TREPR_0667 7c268955dd410c7fb8fc5e958a8b5ed9 474 Pfam PF01204 Trehalase 177 339 3.8E-11 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 TREPR_1419 c6c137fbaa9188c6c30034f337009b11 89 SMART SM00966 13 58 1.1E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_1419 c6c137fbaa9188c6c30034f337009b11 89 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 14 57 1.2E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_1419 c6c137fbaa9188c6c30034f337009b11 89 SUPERFAMILY SSF89447 11 72 1.57E-14 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily TREPR_1419 c6c137fbaa9188c6c30034f337009b11 89 Gene3D G3DSA:2.10.260.10 5 89 1.1E-17 T 13-10-2018 TREPR_3167 ceb4dde8770516e2f67f3835e03bcb00 217 Gene3D G3DSA:1.10.1760.20 12 213 9.2E-6 T 13-10-2018 TREPR_0058 c6ba112fcad9635b482125f9f1a89830 272 SUPERFAMILY SSF56300 1 271 2.05E-49 T 13-10-2018 TREPR_0058 c6ba112fcad9635b482125f9f1a89830 272 PIRSF PIRSF000883 1 272 3.3E-49 T 13-10-2018 IPR011152 Phosphoesterase MJ0912 TREPR_0058 c6ba112fcad9635b482125f9f1a89830 272 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 159 2.9E-19 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 TREPR_0058 c6ba112fcad9635b482125f9f1a89830 272 Gene3D G3DSA:3.60.21.10 1 272 2.7E-60 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like TREPR_2139 31b75c3fb1d5e0f090e36d6721c8b683 406 SUPERFAMILY SSF102114 135 362 2.88E-21 T 13-10-2018 TREPR_2139 31b75c3fb1d5e0f090e36d6721c8b683 406 Gene3D G3DSA:3.20.20.70 140 366 5.5E-17 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0462 518d57ff4cb06c3d697dc4ad2d99e143 268 SUPERFAMILY SSF52266 70 262 2.14E-42 T 13-10-2018 TREPR_0462 518d57ff4cb06c3d697dc4ad2d99e143 268 Gene3D G3DSA:3.40.50.1110 76 264 1.6E-41 T 13-10-2018 IPR036514 SGNH hydrolase superfamily TREPR_0462 518d57ff4cb06c3d697dc4ad2d99e143 268 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 98 253 1.8E-23 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain TREPR_3698 3207bb76a12b64a225bf73fa012da2f1 591 PRINTS PR00723 Subtilisin serine protease family (S8) signature 316 332 8.3E-6 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related TREPR_3698 3207bb76a12b64a225bf73fa012da2f1 591 PRINTS PR00723 Subtilisin serine protease family (S8) signature 44 63 8.3E-6 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related TREPR_3698 3207bb76a12b64a225bf73fa012da2f1 591 PRINTS PR00723 Subtilisin serine protease family (S8) signature 83 96 8.3E-6 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related TREPR_3698 3207bb76a12b64a225bf73fa012da2f1 591 SUPERFAMILY SSF52743 42 397 5.5E-42 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TREPR_3698 3207bb76a12b64a225bf73fa012da2f1 591 Gene3D G3DSA:3.40.50.200 29 392 7.3E-36 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 TREPR_3698 3207bb76a12b64a225bf73fa012da2f1 591 Pfam PF00082 Subtilase family 46 359 1.3E-40 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 TREPR_2230 b4958aac81b1cc3b875cf74df7d3d28d 207 Pfam PF13036 Peptidoglycan-synthase activator LpoB 45 193 1.5E-32 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB TREPR_2230 b4958aac81b1cc3b875cf74df7d3d28d 207 Gene3D G3DSA:3.40.50.10610 58 198 1.3E-8 T 13-10-2018 TREPR_1180 3fa4c6f53673873f7461e1b3c90fec67 361 Gene3D G3DSA:3.30.10.20 210 271 2.0E-7 T 13-10-2018 TREPR_1180 3fa4c6f53673873f7461e1b3c90fec67 361 SMART SM00740 120 203 0.62 T 13-10-2018 IPR005543 PASTA domain TREPR_1180 3fa4c6f53673873f7461e1b3c90fec67 361 SMART SM00740 206 273 2.7E-4 T 13-10-2018 IPR005543 PASTA domain TREPR_1180 3fa4c6f53673873f7461e1b3c90fec67 361 SMART SM00740 52 119 1.4E-11 T 13-10-2018 IPR005543 PASTA domain TREPR_1180 3fa4c6f53673873f7461e1b3c90fec67 361 Pfam PF03793 PASTA domain 126 202 1.2E-4 T 13-10-2018 IPR005543 PASTA domain TREPR_1180 3fa4c6f53673873f7461e1b3c90fec67 361 Pfam PF03793 PASTA domain 210 264 4.3E-5 T 13-10-2018 IPR005543 PASTA domain TREPR_1180 3fa4c6f53673873f7461e1b3c90fec67 361 Pfam PF03793 PASTA domain 58 118 5.5E-11 T 13-10-2018 IPR005543 PASTA domain TREPR_1180 3fa4c6f53673873f7461e1b3c90fec67 361 Gene3D G3DSA:3.30.10.20 50 121 1.2E-12 T 13-10-2018 TREPR_1180 3fa4c6f53673873f7461e1b3c90fec67 361 Gene3D G3DSA:3.30.10.20 124 206 2.3E-8 T 13-10-2018 TREPR_0089 9e71e386af107bacf919ef018acced61 293 Pfam PF08902 Domain of unknown function (DUF1848) 2 291 2.2E-88 T 13-10-2018 IPR014998 Protein of unknown function DUF1848 TREPR_0550 229d082839e18b813f5886e74b2fbe98 466 Pfam PF02321 Outer membrane efflux protein 284 460 2.6E-13 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TREPR_0550 229d082839e18b813f5886e74b2fbe98 466 Pfam PF02321 Outer membrane efflux protein 39 225 4.1E-20 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TREPR_0550 229d082839e18b813f5886e74b2fbe98 466 SUPERFAMILY SSF56954 11 461 8.63E-48 T 13-10-2018 TREPR_0550 229d082839e18b813f5886e74b2fbe98 466 Gene3D G3DSA:1.20.1600.10 34 464 4.5E-46 T 13-10-2018 TREPR_1168 72e732b9ec0fdd292a52300a2a8c6035 545 Gene3D G3DSA:3.40.50.300 46 198 2.6E-8 T 13-10-2018 TREPR_1168 72e732b9ec0fdd292a52300a2a8c6035 545 SUPERFAMILY SSF52540 52 301 8.7E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0942 52f309d3586d38cae3328c034c2023e7 373 SUPERFAMILY SSF53300 242 338 5.78E-6 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_0942 52f309d3586d38cae3328c034c2023e7 373 Pfam PF13203 Putative metallopeptidase domain 16 145 3.9E-8 T 13-10-2018 IPR025154 Putative metallopeptidase domain TREPR_0942 52f309d3586d38cae3328c034c2023e7 373 Pfam PF09967 VWA-like domain (DUF2201) 243 357 8.7E-12 T 13-10-2018 IPR018698 VWA-like domain TREPR_0529 dfad97578c02391804902b008bea2825 491 Pfam PF13500 AAA domain 11 233 7.5E-16 T 13-10-2018 TREPR_0529 dfad97578c02391804902b008bea2825 491 Gene3D G3DSA:3.40.50.300 7 246 1.2E-50 T 13-10-2018 TREPR_0529 dfad97578c02391804902b008bea2825 491 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 12 481 2.2E-146 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TREPR_0529 dfad97578c02391804902b008bea2825 491 SUPERFAMILY SSF52540 12 234 5.91E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0529 dfad97578c02391804902b008bea2825 491 SUPERFAMILY SSF52317 198 432 1.28E-33 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0529 dfad97578c02391804902b008bea2825 491 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 490 163.28 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TREPR_0529 dfad97578c02391804902b008bea2825 491 Gene3D G3DSA:3.40.50.880 256 427 4.8E-20 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_0529 dfad97578c02391804902b008bea2825 491 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 257 433 1.2E-48 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TREPR_1412 5ba8aff10ca9f19bd305d664d2db94f2 132 SUPERFAMILY SSF88723 1 122 3.92E-16 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_1412 5ba8aff10ca9f19bd305d664d2db94f2 132 Gene3D G3DSA:3.40.50.1010 1 126 3.7E-22 T 13-10-2018 TREPR_1412 5ba8aff10ca9f19bd305d664d2db94f2 132 Pfam PF01850 PIN domain 3 117 3.4E-10 T 13-10-2018 IPR002716 PIN domain TREPR_1559 3f0ee031bdd3ee7c381991cbfb9c1ccc 393 Pfam PF07690 Major Facilitator Superfamily 17 341 4.3E-32 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TREPR_1559 3f0ee031bdd3ee7c381991cbfb9c1ccc 393 SUPERFAMILY SSF103473 1 387 7.59E-44 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_1559 3f0ee031bdd3ee7c381991cbfb9c1ccc 393 Gene3D G3DSA:1.20.1250.20 6 381 3.3E-37 T 13-10-2018 TREPR_1929 9aaab05a2f6c0b72a3507d315d9af9a4 676 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 2.2E-19 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 TREPR_1929 9aaab05a2f6c0b72a3507d315d9af9a4 676 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 402 658 1.6E-44 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 TREPR_3003 80153600b0031de6c4708bd69362e59e 372 SUPERFAMILY SSF53822 52 346 5.55E-55 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_3003 80153600b0031de6c4708bd69362e59e 372 Gene3D G3DSA:3.40.50.2300 159 353 8.1E-83 T 13-10-2018 TREPR_3003 80153600b0031de6c4708bd69362e59e 372 Gene3D G3DSA:3.40.50.2300 68 335 8.1E-83 T 13-10-2018 TREPR_3003 80153600b0031de6c4708bd69362e59e 372 Pfam PF13407 Periplasmic binding protein domain 70 312 8.2E-47 T 13-10-2018 IPR025997 Periplasmic binding protein TREPR_2159 2ab18080d918c6d7327d918a00d04bb5 111 Gene3D G3DSA:3.30.2310.20 1 102 2.3E-11 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_2159 2ab18080d918c6d7327d918a00d04bb5 111 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 97 1.3E-6 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TREPR_3326 f108aa8eb3137f05575480421cb0ae72 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 281 4.7E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3326 f108aa8eb3137f05575480421cb0ae72 291 Gene3D G3DSA:1.10.3720.10 51 289 5.5E-55 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3326 f108aa8eb3137f05575480421cb0ae72 291 SUPERFAMILY SSF161098 55 279 2.09E-46 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1649 2f34977ac5bd27a5bf9e0dfcf3c0efef 99 Pfam PF05164 Cell division protein ZapA 7 90 6.3E-6 T 13-10-2018 IPR007838 Cell division protein ZapA-like TREPR_1649 2f34977ac5bd27a5bf9e0dfcf3c0efef 99 SUPERFAMILY SSF102829 8 94 1.7E-5 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily TREPR_1956 ee1e184dbf09f782e6570823301ce0e6 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 312 1.1E-36 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1956 ee1e184dbf09f782e6570823301ce0e6 315 SUPERFAMILY SSF161098 90 297 4.45E-21 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1956 ee1e184dbf09f782e6570823301ce0e6 315 Gene3D G3DSA:1.10.3720.10 84 305 2.3E-28 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3021 c0100cb421d8f0d68bc1b397cd5998f8 370 Pfam PF02073 Thermophilic metalloprotease (M29) 3 316 7.2E-40 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 TREPR_3021 c0100cb421d8f0d68bc1b397cd5998f8 370 Gene3D G3DSA:3.40.1830.10 2 164 9.6E-14 T 13-10-2018 IPR035097 Peptidase M29, N-terminal TREPR_3021 c0100cb421d8f0d68bc1b397cd5998f8 370 SUPERFAMILY SSF144052 1 353 1.09E-87 T 13-10-2018 TREPR_3726 d418895be5aa6d8d8483f5f28e484a4e 487 Gene3D G3DSA:3.10.560.10 117 201 2.6E-8 T 13-10-2018 TREPR_3726 d418895be5aa6d8d8483f5f28e484a4e 487 Gene3D G3DSA:3.10.560.10 202 286 1.1E-9 T 13-10-2018 TREPR_3726 d418895be5aa6d8d8483f5f28e484a4e 487 Pfam PF10531 SLBB domain 387 423 0.013 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_3726 d418895be5aa6d8d8483f5f28e484a4e 487 Pfam PF10531 SLBB domain 206 260 2.5E-7 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0906 008591ffba81d02a5b0455af5818dd48 279 Pfam PF11185 Protein of unknown function (DUF2971) 96 161 2.4E-7 T 13-10-2018 IPR021352 Protein of unknown function DUF2971 TREPR_2820 28d6bcbd55e4e8cbf7f6f1a56006f986 305 SUPERFAMILY SSF48403 150 300 1.12E-25 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2820 28d6bcbd55e4e8cbf7f6f1a56006f986 305 SMART SM00248 212 241 570.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2820 28d6bcbd55e4e8cbf7f6f1a56006f986 305 SMART SM00248 245 274 1.7 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2820 28d6bcbd55e4e8cbf7f6f1a56006f986 305 SMART SM00248 178 207 0.86 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 TREPR_2820 28d6bcbd55e4e8cbf7f6f1a56006f986 305 Gene3D G3DSA:1.25.40.20 121 305 3.3E-30 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TREPR_2820 28d6bcbd55e4e8cbf7f6f1a56006f986 305 Pfam PF13857 Ankyrin repeats (many copies) 198 252 3.4E-6 T 13-10-2018 TREPR_0671 c0ea681ddae7184f342431c8f5ef8f9e 528 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 98 120 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site TREPR_0671 c0ea681ddae7184f342431c8f5ef8f9e 528 Gene3D G3DSA:3.40.190.10 57 509 1.4E-83 T 13-10-2018 TREPR_0671 c0ea681ddae7184f342431c8f5ef8f9e 528 Gene3D G3DSA:3.10.105.10 309 508 1.4E-83 T 13-10-2018 TREPR_0671 c0ea681ddae7184f342431c8f5ef8f9e 528 SUPERFAMILY SSF53850 48 516 1.36E-82 T 13-10-2018 TREPR_0671 c0ea681ddae7184f342431c8f5ef8f9e 528 Gene3D G3DSA:3.90.76.10 83 195 1.4E-83 T 13-10-2018 TREPR_0671 c0ea681ddae7184f342431c8f5ef8f9e 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 427 6.8E-63 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_0671 c0ea681ddae7184f342431c8f5ef8f9e 528 PIRSF PIRSF002741 7 525 2.8E-64 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_1918 de5774dc514f154aa0d1938af0ef6a13 163 SUPERFAMILY SSF140566 9 114 4.45E-7 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 TREPR_2303 f5832eb17e3adf81d7ed41378efddabb 437 Pfam PF13416 Bacterial extracellular solute-binding protein 45 359 1.3E-29 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_2303 f5832eb17e3adf81d7ed41378efddabb 437 Gene3D G3DSA:3.40.190.10 23 417 1.2E-43 T 13-10-2018 TREPR_2303 f5832eb17e3adf81d7ed41378efddabb 437 SUPERFAMILY SSF53850 24 410 6.64E-37 T 13-10-2018 TREPR_2684 ce36bed94eb7c413b1a05ee31c3895b4 155 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 4 155 1.7E-41 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TREPR_2684 ce36bed94eb7c413b1a05ee31c3895b4 155 Hamap MF_00984 Single-stranded DNA-binding protein. 5 110 32.905 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TREPR_2684 ce36bed94eb7c413b1a05ee31c3895b4 155 Gene3D G3DSA:2.40.50.140 3 138 1.0E-40 T 13-10-2018 TREPR_2684 ce36bed94eb7c413b1a05ee31c3895b4 155 Pfam PF00436 Single-strand binding protein family 5 106 8.1E-33 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TREPR_2684 ce36bed94eb7c413b1a05ee31c3895b4 155 SUPERFAMILY SSF50249 5 155 1.44E-46 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold TREPR_0959 4f7813f17db6d6eadc040baf0960f08c 161 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 29 155 1.1E-20 T 13-10-2018 IPR002178 PTS EIIA type-2 domain TREPR_0959 4f7813f17db6d6eadc040baf0960f08c 161 SUPERFAMILY SSF55804 21 155 7.19E-24 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_0959 4f7813f17db6d6eadc040baf0960f08c 161 Gene3D G3DSA:3.40.930.10 4 159 1.4E-29 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_0995 db7bb545ac8ec3ef4044c100db91aa9b 321 Pfam PF03783 Curli production assembly/transport component CsgG 52 125 3.8E-7 T 13-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 TREPR_1885 0261c0cd3cd1069238e57ce279f1cf34 194 Gene3D G3DSA:3.40.1550.10 16 194 2.3E-20 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_1885 0261c0cd3cd1069238e57ce279f1cf34 194 Pfam PF02154 Flagellar motor switch protein FliM 8 192 7.3E-11 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TREPR_1885 0261c0cd3cd1069238e57ce279f1cf34 194 SUPERFAMILY SSF103039 13 192 7.06E-8 T 13-10-2018 IPR028976 CheC-like superfamily TREPR_0601 0fee3cc10fa74f413d99923ff9b59213 194 Pfam PF00293 NUDIX domain 56 165 4.9E-16 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TREPR_0601 0fee3cc10fa74f413d99923ff9b59213 194 SUPERFAMILY SSF55811 13 185 3.52E-37 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TREPR_0601 0fee3cc10fa74f413d99923ff9b59213 194 Gene3D G3DSA:3.90.79.10 9 187 2.7E-41 T 13-10-2018 TREPR_2260 ecba6dd631a19a586cfd629461b37059 67 SUPERFAMILY SSF46955 1 51 2.38E-6 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily TREPR_2260 ecba6dd631a19a586cfd629461b37059 67 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 3 50 1.0E-9 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 TREPR_2260 ecba6dd631a19a586cfd629461b37059 67 Pfam PF12728 Helix-turn-helix domain 3 50 3.5E-11 T 13-10-2018 TREPR_1144 878274ed40c5f833e4c6587caf660f25 128 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 75 4.7E-20 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TREPR_1144 878274ed40c5f833e4c6587caf660f25 128 Pfam PF03840 Preprotein translocase SecG subunit 7 73 8.6E-18 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TREPR_1144 878274ed40c5f833e4c6587caf660f25 128 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 7.0E-12 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TREPR_1144 878274ed40c5f833e4c6587caf660f25 128 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 7.0E-12 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TREPR_1522 490f78cc41e5ded8f3a816155695e21b 417 SUPERFAMILY SSF51726 1 416 1.2E-35 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_1522 490f78cc41e5ded8f3a816155695e21b 417 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 215 414 7.6E-18 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_1522 490f78cc41e5ded8f3a816155695e21b 417 Gene3D G3DSA:3.20.20.210 1 415 4.4E-58 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_0018 d77bfa46d0968b0f93c1b55b5790329b 122 SUPERFAMILY SSF103481 44 121 1.44E-11 T 13-10-2018 TREPR_0018 d77bfa46d0968b0f93c1b55b5790329b 122 Gene3D G3DSA:1.10.3730.20 27 122 3.9E-10 T 13-10-2018 TREPR_0018 d77bfa46d0968b0f93c1b55b5790329b 122 Pfam PF00892 EamA-like transporter family 50 120 3.9E-7 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TREPR_0852 cc2291deca0a930e29f8da68fdf95354 289 SUPERFAMILY SSF102114 18 205 9.81E-9 T 13-10-2018 TREPR_0852 cc2291deca0a930e29f8da68fdf95354 289 Pfam PF04055 Radical SAM superfamily 16 183 1.1E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TREPR_1162 ace5cfb0711309477f33f185ea8d0996 137 Gene3D G3DSA:3.40.50.1010 1 132 1.8E-24 T 13-10-2018 TREPR_1162 ace5cfb0711309477f33f185ea8d0996 137 Pfam PF01850 PIN domain 3 129 6.9E-9 T 13-10-2018 IPR002716 PIN domain TREPR_1162 ace5cfb0711309477f33f185ea8d0996 137 SUPERFAMILY SSF88723 3 136 8.13E-15 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_2022 23e9f9d8558f75fbd41bf74760d8dc76 178 SUPERFAMILY SSF88697 6 165 2.65E-19 T 13-10-2018 IPR015947 PUA-like superfamily TREPR_2022 23e9f9d8558f75fbd41bf74760d8dc76 178 Gene3D G3DSA:2.30.130.30 4 86 6.4E-18 T 13-10-2018 TREPR_2022 23e9f9d8558f75fbd41bf74760d8dc76 178 Pfam PF04266 ASCH domain 10 139 1.5E-10 T 13-10-2018 IPR007374 ASCH domain TREPR_0489 43336da2d574d70b84611f46edaef847 150 SUPERFAMILY SSF55804 3 149 4.71E-33 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_0489 43336da2d574d70b84611f46edaef847 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 149 4.9E-32 T 13-10-2018 IPR002178 PTS EIIA type-2 domain TREPR_0489 43336da2d574d70b84611f46edaef847 150 Gene3D G3DSA:3.40.930.10 3 150 7.3E-41 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TREPR_1794 1c462e7cd181d42895d22ffa52364f93 432 Pfam PF13635 Domain of unknown function (DUF4143) 225 372 1.7E-11 T 13-10-2018 IPR025420 Domain of unknown function DUF4143 TREPR_1794 1c462e7cd181d42895d22ffa52364f93 432 SUPERFAMILY SSF52540 20 228 1.25E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1794 1c462e7cd181d42895d22ffa52364f93 432 Pfam PF13173 AAA domain 41 170 1.9E-33 T 13-10-2018 TREPR_3784 1d37f465a358694438b557ac7d5ffb4b 540 SUPERFAMILY SSF53067 4 272 9.07E-49 T 13-10-2018 TREPR_3784 1d37f465a358694438b557ac7d5ffb4b 540 PIRSF PIRSF000538 2 531 7.6E-112 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TREPR_3784 1d37f465a358694438b557ac7d5ffb4b 540 Gene3D G3DSA:3.30.420.40 1 265 1.6E-54 T 13-10-2018 TREPR_3784 1d37f465a358694438b557ac7d5ffb4b 540 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 270 5.4E-38 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TREPR_3784 1d37f465a358694438b557ac7d5ffb4b 540 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 311 475 2.4E-21 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TREPR_3784 1d37f465a358694438b557ac7d5ffb4b 540 Gene3D G3DSA:3.30.420.40 266 534 4.1E-55 T 13-10-2018 TREPR_3784 1d37f465a358694438b557ac7d5ffb4b 540 SUPERFAMILY SSF53067 273 523 3.6E-45 T 13-10-2018 TREPR_3248 df19d2408ec00a98acaf547d9b974cd3 117 Pfam PF13751 Transposase DDE domain 8 107 2.7E-20 T 13-10-2018 IPR025668 Transposase DDE domain TREPR_3341 f413b5d4c8b8ad2e5e57e000971e27e5 105 Gene3D G3DSA:3.30.70.100 2 99 1.2E-23 T 13-10-2018 TREPR_3341 f413b5d4c8b8ad2e5e57e000971e27e5 105 SUPERFAMILY SSF54909 1 93 1.82E-25 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel TREPR_3341 f413b5d4c8b8ad2e5e57e000971e27e5 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 5.5E-20 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain TREPR_2571 1de67c3aa3059e6e2c2b89f9b5c40c71 273 Pfam PF08478 POTRA domain, FtsQ-type 51 118 1.9E-9 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type TREPR_3780 d5f710939fbeb6c6877f8fbd476e9262 203 Pfam PF00551 Formyl transferase 2 190 4.5E-48 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TREPR_3780 d5f710939fbeb6c6877f8fbd476e9262 203 SUPERFAMILY SSF53328 2 196 1.05E-46 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TREPR_3780 d5f710939fbeb6c6877f8fbd476e9262 203 Gene3D G3DSA:3.40.50.170 1 202 3.4E-65 T 13-10-2018 TREPR_3780 d5f710939fbeb6c6877f8fbd476e9262 203 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 199 2.9E-53 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 TREPR_3780 d5f710939fbeb6c6877f8fbd476e9262 203 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 197 28.194 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 TREPR_3475 8b6094e7f66954c477606c1888fca95d 120 SUPERFAMILY SSF47413 1 71 3.75E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_3475 8b6094e7f66954c477606c1888fca95d 120 SMART SM00530 9 64 3.7E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3475 8b6094e7f66954c477606c1888fca95d 120 Gene3D G3DSA:1.10.260.40 5 72 6.5E-12 T 13-10-2018 TREPR_3475 8b6094e7f66954c477606c1888fca95d 120 Pfam PF01381 Helix-turn-helix 11 64 1.3E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TREPR_3268 9db508abb1ba53acdf7460798f4637eb 277 SUPERFAMILY SSF161098 70 262 7.85E-23 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3268 9db508abb1ba53acdf7460798f4637eb 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 272 1.2E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3268 9db508abb1ba53acdf7460798f4637eb 277 Gene3D G3DSA:1.10.3720.10 64 267 2.9E-19 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2476 a91abae2452e5f54a04478590c89124f 264 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 5 251 2.0E-38 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TREPR_2137 bee36e3e9b26aade49261b27418b6f73 255 SUPERFAMILY SSF161098 51 239 8.63E-29 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2137 bee36e3e9b26aade49261b27418b6f73 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 244 9.1E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2137 bee36e3e9b26aade49261b27418b6f73 255 Gene3D G3DSA:1.10.3720.10 49 242 1.6E-21 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2960 c97ace8ea298afd869fb62f11581a62a 270 Gene3D G3DSA:3.40.50.10610 140 269 2.7E-10 T 13-10-2018 TREPR_2960 c97ace8ea298afd869fb62f11581a62a 270 Pfam PF03783 Curli production assembly/transport component CsgG 170 242 3.2E-10 T 13-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 TREPR_2960 c97ace8ea298afd869fb62f11581a62a 270 Pfam PF08308 PEGA domain 28 84 7.2E-12 T 13-10-2018 IPR013229 PEGA TREPR_1937 9f4e9b175869d4cdd3663977235f78d4 322 Gene3D G3DSA:2.170.120.40 132 207 2.9E-10 T 13-10-2018 TREPR_1937 9f4e9b175869d4cdd3663977235f78d4 322 Pfam PF07949 YbbR-like protein 52 104 3.5E-5 T 13-10-2018 IPR012505 YbbR-like TREPR_1937 9f4e9b175869d4cdd3663977235f78d4 322 Pfam PF07949 YbbR-like protein 136 202 1.8E-7 T 13-10-2018 IPR012505 YbbR-like TREPR_1937 9f4e9b175869d4cdd3663977235f78d4 322 Gene3D G3DSA:2.170.120.30 225 320 1.0E-9 T 13-10-2018 TREPR_1937 9f4e9b175869d4cdd3663977235f78d4 322 Gene3D G3DSA:2.170.120.30 36 130 3.7E-18 T 13-10-2018 TREPR_3477 24f78c4a03f1715e0130aea1ce22bb58 98 Pfam PF14076 Domain of unknown function (DUF4258) 18 83 1.2E-13 T 13-10-2018 IPR025354 Protein of unknown function DUF4258 TREPR_2669 2a2e83619c1013f170b0b793b98c54f8 195 SUPERFAMILY SSF52972 3 188 2.55E-52 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TREPR_2669 2a2e83619c1013f170b0b793b98c54f8 195 PIRSF PIRSF006305 1 192 2.0E-48 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 TREPR_2669 2a2e83619c1013f170b0b793b98c54f8 195 Gene3D G3DSA:3.90.950.10 1 191 2.7E-58 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TREPR_2669 2a2e83619c1013f170b0b793b98c54f8 195 Pfam PF02545 Maf-like protein 4 188 1.1E-48 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 TREPR_2669 2a2e83619c1013f170b0b793b98c54f8 195 Hamap MF_00528 Septum formation protein Maf [maf]. 3 193 28.105 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 TREPR_2669 2a2e83619c1013f170b0b793b98c54f8 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 187 2.9E-46 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 Pfam PF01016 Ribosomal L27 protein 2 78 1.4E-32 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 2.0E-12 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 77 2.0E-30 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.2E-32 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.2E-32 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.2E-32 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 Gene3D G3DSA:2.40.50.1030 5 86 2.3E-25 T 13-10-2018 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 25.127 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_3450 e7621a9217e2d55335e9f780f87b9c22 94 SUPERFAMILY SSF110324 2 78 9.07E-29 T 13-10-2018 TREPR_1440 c54b6af098847ebf3672a5001cf40fbf 88 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 60 2.5E-17 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TREPR_1440 c54b6af098847ebf3672a5001cf40fbf 88 Pfam PF04221 RelB antitoxin 5 51 1.0E-9 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TREPR_1440 c54b6af098847ebf3672a5001cf40fbf 88 Gene3D G3DSA:1.10.1220.10 2 52 3.9E-9 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TREPR_2208 4bd6a076082976aaf7cc97f708af4651 632 Pfam PF01973 Protein of unknown function DUF115 206 385 1.7E-26 T 13-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TREPR_3724 6e9fb9479d4e9229a6b87febbd9de718 96 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 62 2.2E-5 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TREPR_2999 8b1b6181292a4f2ceeb22b7918541f99 397 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 384 3.0E-31 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_2532 c28800f7145ba078f5ce7501d4cff9c1 64 SUPERFAMILY SSF63562 4 62 6.45E-6 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TREPR_2532 c28800f7145ba078f5ce7501d4cff9c1 64 Pfam PF01192 RNA polymerase Rpb6 8 59 1.2E-4 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TREPR_1575 2726b129f5e0d6e03d3e99efd0fe589d 205 Gene3D G3DSA:3.40.50.360 1 197 7.8E-34 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_1575 2726b129f5e0d6e03d3e99efd0fe589d 205 SUPERFAMILY SSF52218 1 186 2.17E-40 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_1575 2726b129f5e0d6e03d3e99efd0fe589d 205 Pfam PF03358 NADPH-dependent FMN reductase 1 148 5.4E-27 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 Gene3D G3DSA:3.40.50.10860 7 277 1.6E-83 T 13-10-2018 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 3.8E-46 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 3.8E-46 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 257 275 3.8E-46 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 3.8E-46 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 3.8E-46 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 240 256 3.8E-46 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 3.8E-46 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 SUPERFAMILY SSF53223 1 120 6.62E-29 T 13-10-2018 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 SUPERFAMILY SSF51735 134 280 6.64E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 283 29.336 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 Gene3D G3DSA:3.40.50.720 5 260 1.6E-83 T 13-10-2018 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 133 282 6.2E-52 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_3124 1ff37a05b1025f74768abac4c4fa6eee 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 119 1.4E-28 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TREPR_1930 cd3939ce45a78934aeac9762c7086f55 127 Gene3D G3DSA:3.30.160.170 30 123 1.5E-11 T 13-10-2018 IPR035924 FlaG-like superfamily TREPR_1930 cd3939ce45a78934aeac9762c7086f55 127 Pfam PF03646 FlaG protein 51 125 3.5E-19 T 13-10-2018 IPR005186 FlaG protein TREPR_1930 cd3939ce45a78934aeac9762c7086f55 127 SUPERFAMILY SSF160214 46 127 2.09E-19 T 13-10-2018 IPR035924 FlaG-like superfamily TREPR_1105 89ce9a45810337ed3fc4cd1408e69a10 267 Gene3D G3DSA:3.60.15.10 1 267 1.1E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_1105 89ce9a45810337ed3fc4cd1408e69a10 267 SUPERFAMILY SSF56281 1 264 1.31E-33 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_1105 89ce9a45810337ed3fc4cd1408e69a10 267 Pfam PF12706 Beta-lactamase superfamily domain 24 144 4.7E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_2662 da9590658e06803001c2cdd1029e130f 751 Gene3D G3DSA:3.90.1580.10 474 750 1.9E-36 T 13-10-2018 TREPR_2662 da9590658e06803001c2cdd1029e130f 751 Pfam PF03781 Sulfatase-modifying factor enzyme 1 496 707 9.3E-22 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TREPR_2662 da9590658e06803001c2cdd1029e130f 751 SUPERFAMILY SSF56436 496 749 1.79E-25 T 13-10-2018 IPR016187 C-type lectin fold TREPR_2679 7bc5de872ab086c5c03f7af7ab25d1b0 656 SUPERFAMILY SSF50998 196 632 5.49E-7 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TREPR_2679 7bc5de872ab086c5c03f7af7ab25d1b0 656 Gene3D G3DSA:2.130.10.10 8 257 4.7E-19 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_2679 7bc5de872ab086c5c03f7af7ab25d1b0 656 SUPERFAMILY SSF50978 17 313 2.3E-22 T 13-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 TREPR_2679 7bc5de872ab086c5c03f7af7ab25d1b0 656 SMART SM00320 10 49 0.0036 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 TREPR_0174 e6f29d19ab7a4baf58bc8707191ed3b9 295 Gene3D G3DSA:3.40.1130.10 26 224 2.9E-10 T 13-10-2018 TREPR_0174 e6f29d19ab7a4baf58bc8707191ed3b9 295 SMART SM00563 75 218 0.0047 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TREPR_0174 e6f29d19ab7a4baf58bc8707191ed3b9 295 SUPERFAMILY SSF69593 50 221 1.7E-23 T 13-10-2018 TREPR_1578 4fceeb7b31b6a8aa90740e7d8cb3cbb4 56 SUPERFAMILY SSF54862 3 54 1.7E-18 T 13-10-2018 TREPR_1578 4fceeb7b31b6a8aa90740e7d8cb3cbb4 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1578 4fceeb7b31b6a8aa90740e7d8cb3cbb4 56 Gene3D G3DSA:3.30.70.20 2 55 1.1E-18 T 13-10-2018 TREPR_1578 4fceeb7b31b6a8aa90740e7d8cb3cbb4 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TREPR_1578 4fceeb7b31b6a8aa90740e7d8cb3cbb4 56 Pfam PF13187 4Fe-4S dicluster domain 8 53 5.3E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_3685 199e6a3e0975a8b0ef8fe302461468fc 176 SUPERFAMILY SSF46565 18 98 2.75E-9 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_3685 199e6a3e0975a8b0ef8fe302461468fc 176 Gene3D G3DSA:1.10.287.110 13 90 2.1E-6 T 13-10-2018 IPR036869 Chaperone J-domain superfamily TREPR_2316 ff2ace5d187d8e5a4f6080b0a4b0e53e 519 Pfam PF07556 Protein of unknown function (DUF1538) 19 229 4.7E-59 T 13-10-2018 IPR011435 Protein of unknown function DUF1538 TREPR_2316 ff2ace5d187d8e5a4f6080b0a4b0e53e 519 Pfam PF07556 Protein of unknown function (DUF1538) 278 487 2.0E-66 T 13-10-2018 IPR011435 Protein of unknown function DUF1538 TREPR_3544 90cf5827bb827ee6784614940aaef61f 606 Gene3D G3DSA:3.40.50.2030 367 508 1.8E-8 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 TREPR_3544 90cf5827bb827ee6784614940aaef61f 606 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 507 573 2.2E-6 T 13-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain TREPR_0898 3711c4a3a59366a15faadfc23f7219cd 155 Gene3D G3DSA:3.40.140.10 14 137 3.3E-42 T 13-10-2018 TREPR_0898 3711c4a3a59366a15faadfc23f7219cd 155 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 86 91 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site TREPR_0898 3711c4a3a59366a15faadfc23f7219cd 155 Pfam PF04002 RadC-like JAB domain 17 135 2.4E-40 T 13-10-2018 IPR025657 RadC-like JAB domain TREPR_1683 d37c40d4c5e126405a0e8f0fb50c8e35 327 Gene3D G3DSA:3.40.190.170 16 324 7.6E-65 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily TREPR_1683 d37c40d4c5e126405a0e8f0fb50c8e35 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 24 300 6.6E-46 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 TREPR_1184 2aae048be6d6f96121f46b0be25d3a79 88 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 8 55 4.5E-14 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TREPR_1184 2aae048be6d6f96121f46b0be25d3a79 88 SUPERFAMILY SSF143120 8 62 1.31E-11 T 13-10-2018 IPR036165 YefM-like superfamily TREPR_1184 2aae048be6d6f96121f46b0be25d3a79 88 Gene3D G3DSA:3.40.1620.10 6 55 7.1E-21 T 13-10-2018 TREPR_1184 2aae048be6d6f96121f46b0be25d3a79 88 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 10 56 1.2E-13 T 13-10-2018 TREPR_0406 33c17e5f62deb39d9044690205b88f2d 275 Gene3D G3DSA:3.40.50.970 1 275 6.3E-89 T 13-10-2018 TREPR_0406 33c17e5f62deb39d9044690205b88f2d 275 ProSitePatterns PS00801 Transketolase signature 1. 17 37 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TREPR_0406 33c17e5f62deb39d9044690205b88f2d 275 SUPERFAMILY SSF52518 4 269 1.49E-79 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0406 33c17e5f62deb39d9044690205b88f2d 275 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 12 260 6.0E-47 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TREPR_1919 b3f841253b6ceddc1dd5ede135563efb 626 SUPERFAMILY SSF64518 175 622 4.45E-19 T 13-10-2018 TREPR_1919 b3f841253b6ceddc1dd5ede135563efb 626 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 572 621 2.9E-11 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TREPR_1919 b3f841253b6ceddc1dd5ede135563efb 626 Pfam PF00460 Flagella basal body rod protein 8 37 1.7E-4 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TREPR_1919 b3f841253b6ceddc1dd5ede135563efb 626 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 332 1.9E-76 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TREPR_1919 b3f841253b6ceddc1dd5ede135563efb 626 PRINTS PR01005 Flagellar hook-associated protein signature 167 191 2.8E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TREPR_1919 b3f841253b6ceddc1dd5ede135563efb 626 PRINTS PR01005 Flagellar hook-associated protein signature 134 154 2.8E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TREPR_1919 b3f841253b6ceddc1dd5ede135563efb 626 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 2.8E-8 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TREPR_0236 5c8c2d9ea73be8a329108731ab307f22 302 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 271 1.1E-24 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_3421 e6411b96e75d523a369c9a648dbc28ff 376 SUPERFAMILY SSF52518 4 202 3.43E-63 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_3421 e6411b96e75d523a369c9a648dbc28ff 376 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 364 4.3E-18 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II TREPR_3421 e6411b96e75d523a369c9a648dbc28ff 376 Gene3D G3DSA:3.40.50.920 256 374 7.6E-17 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_3421 e6411b96e75d523a369c9a648dbc28ff 376 SUPERFAMILY SSF52922 258 373 1.01E-20 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TREPR_3421 e6411b96e75d523a369c9a648dbc28ff 376 Gene3D G3DSA:3.40.50.970 1 192 6.7E-67 T 13-10-2018 TREPR_3421 e6411b96e75d523a369c9a648dbc28ff 376 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 201 2.4E-54 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 TREPR_2889 b50aab1c7a9b0cdf76b6557e7b2590d9 120 SUPERFAMILY SSF54913 1 103 1.53E-28 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TREPR_2889 b50aab1c7a9b0cdf76b6557e7b2590d9 120 Gene3D G3DSA:3.30.70.120 1 115 1.5E-28 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TREPR_2889 b50aab1c7a9b0cdf76b6557e7b2590d9 120 PRINTS PR00340 P-II protein signature 81 101 1.5E-25 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2889 b50aab1c7a9b0cdf76b6557e7b2590d9 120 PRINTS PR00340 P-II protein signature 48 71 1.5E-25 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2889 b50aab1c7a9b0cdf76b6557e7b2590d9 120 PRINTS PR00340 P-II protein signature 2 17 1.5E-25 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2889 b50aab1c7a9b0cdf76b6557e7b2590d9 120 PRINTS PR00340 P-II protein signature 23 41 1.5E-25 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2889 b50aab1c7a9b0cdf76b6557e7b2590d9 120 Pfam PF00543 Nitrogen regulatory protein P-II 4 103 1.8E-27 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_2889 b50aab1c7a9b0cdf76b6557e7b2590d9 120 SMART SM00938 4 103 2.9E-40 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TREPR_3165 a79c8ec7be1b1699122eb95349694c63 395 SUPERFAMILY SSF55874 266 387 1.51E-10 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_3165 a79c8ec7be1b1699122eb95349694c63 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 388 2.0E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TREPR_3165 a79c8ec7be1b1699122eb95349694c63 395 Gene3D G3DSA:3.30.565.10 240 389 1.3E-21 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TREPR_1044 46a209c8f14c1694aa8029e8a2fc5830 316 Pfam PF07751 Abi-like protein 34 223 3.6E-42 T 13-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like TREPR_2032 e04ea2b0d0816a1989985ebd114d54c4 138 Pfam PF03883 Peroxide stress protein YaaA 40 109 3.2E-6 T 13-10-2018 IPR005583 Peroxide stress protein YaaA TREPR_3714 1cda66fdb44bdbcb0d8f2302e18f8a68 142 SUPERFAMILY SSF102712 1 130 1.16E-25 T 13-10-2018 TREPR_3714 1cda66fdb44bdbcb0d8f2302e18f8a68 142 Pfam PF14464 Prokaryotic homologs of the JAB domain 6 126 7.6E-26 T 13-10-2018 IPR028090 JAB domain, prokaryotic TREPR_3714 1cda66fdb44bdbcb0d8f2302e18f8a68 142 SMART SM00232 1 137 1.6E-13 T 13-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 TREPR_3714 1cda66fdb44bdbcb0d8f2302e18f8a68 142 Gene3D G3DSA:3.40.140.10 4 142 1.4E-38 T 13-10-2018 TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 160 347 9.1E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 Gene3D G3DSA:1.10.3720.10 131 346 1.2E-10 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 SMART SM00382 440 639 2.3E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 2 51 1.9E-7 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 678 731 1.1E-12 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 SUPERFAMILY SSF52540 402 653 1.96E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 Gene3D G3DSA:3.40.50.300 405 769 4.1E-78 T 13-10-2018 TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 SUPERFAMILY SSF161098 136 331 9.59E-14 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 ProSitePatterns PS00211 ABC transporters family signature. 562 576 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 Pfam PF00005 ABC transporter 432 589 2.5E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1531 718cffb5f21520abc6244ce5ab0ca8da 771 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 678 739 2.5E-14 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_3577 09f9ce75410de37cfcc47704fb34edd6 406 Pfam PF12683 Protein of unknown function (DUF3798) 33 308 3.5E-124 T 13-10-2018 IPR024258 Protein of unknown function DUF3798 TREPR_3577 09f9ce75410de37cfcc47704fb34edd6 406 SUPERFAMILY SSF53822 69 251 4.63E-8 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_3577 09f9ce75410de37cfcc47704fb34edd6 406 Gene3D G3DSA:3.40.50.11400 33 148 6.8E-73 T 13-10-2018 TREPR_3577 09f9ce75410de37cfcc47704fb34edd6 406 Gene3D G3DSA:3.40.50.11390 149 306 6.8E-73 T 13-10-2018 TREPR_2854 d41c071ebcf44f2828eccc28eebeeef2 221 Pfam PF04347 Flagellar biosynthesis protein, FliO 107 196 8.7E-11 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 TREPR_3489 1e81f6f31156d3356247bcedbb5b050d 436 Gene3D G3DSA:3.40.50.300 1 171 3.9E-28 T 13-10-2018 TREPR_3489 1e81f6f31156d3356247bcedbb5b050d 436 SUPERFAMILY SSF52540 1 215 7.0E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3489 1e81f6f31156d3356247bcedbb5b050d 436 Pfam PF03008 Archaea bacterial proteins of unknown function 317 399 2.7E-15 T 13-10-2018 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal TREPR_3489 1e81f6f31156d3356247bcedbb5b050d 436 Pfam PF01637 ATPase domain predominantly from Archaea 3 210 2.7E-15 T 13-10-2018 IPR011579 ATPase domain GO:0005524 TREPR_2621 f5a1db194946ae13c48d02e601d056e4 453 SUPERFAMILY SSF51998 4 448 6.96E-174 T 13-10-2018 TREPR_2621 f5a1db194946ae13c48d02e601d056e4 453 Gene3D G3DSA:3.20.70.20 4 453 3.7E-176 T 13-10-2018 TREPR_2621 f5a1db194946ae13c48d02e601d056e4 453 Pfam PF05167 Uncharacterised ACR (DUF711) 15 417 6.4E-179 T 13-10-2018 IPR007841 Uncharacterised protein family UPF0210 TREPR_2621 f5a1db194946ae13c48d02e601d056e4 453 Hamap MF_01221 UPF0210 protein . 3 453 51.674 T 13-10-2018 IPR007841 Uncharacterised protein family UPF0210 TREPR_0832 aceea4ab2f40f7b5980a38e3c4d94b31 226 SUPERFAMILY SSF161098 18 211 6.28E-41 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0832 aceea4ab2f40f7b5980a38e3c4d94b31 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 224 2.7E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0832 aceea4ab2f40f7b5980a38e3c4d94b31 226 Gene3D G3DSA:1.10.3720.10 15 224 6.7E-44 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3282 2cc621434b0114cd92eddfc84351fb88 402 SUPERFAMILY SSF81606 23 239 1.44E-8 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_3282 2cc621434b0114cd92eddfc84351fb88 402 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 39 239 1.6E-11 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_3282 2cc621434b0114cd92eddfc84351fb88 402 Gene3D G3DSA:3.60.40.10 5 247 4.9E-24 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_3282 2cc621434b0114cd92eddfc84351fb88 402 SMART SM00331 24 239 0.0097 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_2649 9674166826d3c6dea2b1ea98e10e5174 389 SUPERFAMILY SSF48452 51 291 1.67E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3424 4ea31d3eadfaec3d8f04df389acdb7fd 186 Gene3D G3DSA:1.10.1740.10 4 118 8.7E-29 T 13-10-2018 TREPR_3424 4ea31d3eadfaec3d8f04df389acdb7fd 186 SUPERFAMILY SSF88946 3 109 3.4E-27 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_3424 4ea31d3eadfaec3d8f04df389acdb7fd 186 Gene3D G3DSA:1.10.10.10 119 181 3.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3424 4ea31d3eadfaec3d8f04df389acdb7fd 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 177 2.8E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TREPR_3424 4ea31d3eadfaec3d8f04df389acdb7fd 186 Pfam PF04542 Sigma-70 region 2 27 93 7.3E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TREPR_3424 4ea31d3eadfaec3d8f04df389acdb7fd 186 Pfam PF08281 Sigma-70, region 4 121 173 7.2E-14 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TREPR_3424 4ea31d3eadfaec3d8f04df389acdb7fd 186 SUPERFAMILY SSF88659 110 178 5.98E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TREPR_0637 3297f287b7973dd00ac7afb2ef37dd4a 329 Gene3D G3DSA:1.20.1530.20 3 313 8.2E-33 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily TREPR_0637 3297f287b7973dd00ac7afb2ef37dd4a 329 Pfam PF01758 Sodium Bile acid symporter family 39 224 1.5E-18 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 TREPR_1367 889cec0851740c2bb8eedd7850b7be41 414 Pfam PF09861 Domain of unknown function (DUF2088) 17 176 4.2E-12 T 13-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 TREPR_1367 889cec0851740c2bb8eedd7850b7be41 414 Gene3D G3DSA:3.40.50.11440 2 250 7.6E-63 T 13-10-2018 TREPR_1367 889cec0851740c2bb8eedd7850b7be41 414 Gene3D G3DSA:3.90.226.30 251 409 1.8E-37 T 13-10-2018 TREPR_1831 f9a51535276a6307fcb1a2699719b61c 437 Pfam PF13482 RNase_H superfamily 117 311 1.2E-20 T 13-10-2018 IPR038720 YprB, ribonuclease H-like domain TREPR_1831 f9a51535276a6307fcb1a2699719b61c 437 SUPERFAMILY SSF53098 116 313 9.49E-19 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily TREPR_3514 be5b70c6704863ec6f47641a3052ac0e 77 Gene3D G3DSA:1.10.260.40 3 73 6.7E-8 T 13-10-2018 TREPR_3514 be5b70c6704863ec6f47641a3052ac0e 77 SUPERFAMILY SSF47413 4 37 4.15E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0913 ac1dd62a8c1cb5b8efe0261be3eff825 256 SUPERFAMILY SSF52540 1 248 1.33E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0913 ac1dd62a8c1cb5b8efe0261be3eff825 256 Gene3D G3DSA:3.40.50.300 1 251 1.0E-45 T 13-10-2018 TREPR_0913 ac1dd62a8c1cb5b8efe0261be3eff825 256 Pfam PF13614 AAA domain 1 161 2.1E-26 T 13-10-2018 IPR025669 AAA domain TREPR_0913 ac1dd62a8c1cb5b8efe0261be3eff825 256 PIRSF PIRSF009320 81 252 8.9E-10 T 13-10-2018 TREPR_0913 ac1dd62a8c1cb5b8efe0261be3eff825 256 PIRSF PIRSF009320 1 52 7.2E-11 T 13-10-2018 TREPR_2000 5afaedc950f532b22a36319eb6cb88de 301 SUPERFAMILY SSF53474 26 301 1.54E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_2000 5afaedc950f532b22a36319eb6cb88de 301 Pfam PF07859 alpha/beta hydrolase fold 69 279 1.6E-68 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 TREPR_2000 5afaedc950f532b22a36319eb6cb88de 301 Gene3D G3DSA:3.40.50.1820 1 297 4.2E-79 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_0404 18bb9dc36c08f13e5cd9330284fc0344 329 Gene3D G3DSA:3.40.50.2300 146 316 2.8E-71 T 13-10-2018 TREPR_0404 18bb9dc36c08f13e5cd9330284fc0344 329 Gene3D G3DSA:3.40.50.2300 48 308 2.8E-71 T 13-10-2018 TREPR_0404 18bb9dc36c08f13e5cd9330284fc0344 329 SUPERFAMILY SSF53822 39 319 1.16E-66 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_0404 18bb9dc36c08f13e5cd9330284fc0344 329 Pfam PF13407 Periplasmic binding protein domain 42 299 5.1E-56 T 13-10-2018 IPR025997 Periplasmic binding protein TREPR_3233 40d7b396fe5a0ad2cb76da9473a7f163 87 SUPERFAMILY SSF143011 5 83 4.19E-21 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_3233 40d7b396fe5a0ad2cb76da9473a7f163 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 7 85 1.9E-31 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TREPR_3233 40d7b396fe5a0ad2cb76da9473a7f163 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 7 85 1.8E-25 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TREPR_3233 40d7b396fe5a0ad2cb76da9473a7f163 87 Gene3D G3DSA:3.30.2310.20 3 85 7.1E-34 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_3516 4459eda37a770b21d03fd5c61615ee9e 77 Pfam PF03683 Uncharacterised protein family (UPF0175) 18 76 5.6E-18 T 13-10-2018 IPR005368 Uncharacterised protein family UPF0175 TREPR_3824 0f24d836f1eae532881823ae889c2668 135 SUPERFAMILY SSF88723 5 130 9.25E-18 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_3824 0f24d836f1eae532881823ae889c2668 135 Pfam PF01850 PIN domain 6 118 6.3E-13 T 13-10-2018 IPR002716 PIN domain TREPR_3824 0f24d836f1eae532881823ae889c2668 135 Gene3D G3DSA:3.40.50.1010 5 126 3.9E-10 T 13-10-2018 TREPR_1859 7809b1a0b34a6ec0223e7987d0997091 219 Pfam PF13350 Tyrosine phosphatase family 59 195 1.3E-14 T 13-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type TREPR_1859 7809b1a0b34a6ec0223e7987d0997091 219 SUPERFAMILY SSF52799 18 155 2.75E-17 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like TREPR_1859 7809b1a0b34a6ec0223e7987d0997091 219 Gene3D G3DSA:3.90.190.10 7 177 3.1E-19 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like TREPR_1859 7809b1a0b34a6ec0223e7987d0997091 219 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 118 128 - T 13-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 TREPR_0486 31908e0e72d2f8a6aedf6abcd76d03f0 242 Gene3D G3DSA:1.10.530.10 90 231 2.0E-17 T 13-10-2018 TREPR_0486 31908e0e72d2f8a6aedf6abcd76d03f0 242 Pfam PF01464 Transglycosylase SLT domain 97 194 1.6E-14 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 TREPR_0486 31908e0e72d2f8a6aedf6abcd76d03f0 242 SUPERFAMILY SSF53955 92 216 1.07E-21 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily TREPR_1023 a23d65a99da89408ef83e04c34d19f8e 167 Pfam PF02559 CarD-like/TRCF domain 9 116 2.1E-15 T 13-10-2018 IPR003711 CarD-like/TRCF domain TREPR_1023 a23d65a99da89408ef83e04c34d19f8e 167 Gene3D G3DSA:2.30.30.840 4 69 4.0E-24 T 13-10-2018 TREPR_1023 a23d65a99da89408ef83e04c34d19f8e 167 Gene3D G3DSA:1.20.58.1290 70 166 1.6E-21 T 13-10-2018 TREPR_1023 a23d65a99da89408ef83e04c34d19f8e 167 SMART SM01058 8 118 2.0E-22 T 13-10-2018 IPR003711 CarD-like/TRCF domain TREPR_1023 a23d65a99da89408ef83e04c34d19f8e 167 SUPERFAMILY SSF141259 5 73 2.22E-12 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily TREPR_0179 f9cc05f7bcda069eb8a4fce4e47f5268 397 Pfam PF01882 Protein of unknown function DUF58 206 292 5.1E-8 T 13-10-2018 IPR002881 Domain of unknown function DUF58 TREPR_2038 434a8a3c9dcce605805c6f2ebcd00ad1 279 SUPERFAMILY SSF143011 1 86 8.11E-9 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_2038 434a8a3c9dcce605805c6f2ebcd00ad1 279 Gene3D G3DSA:3.30.2310.20 3 90 3.6E-8 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 3.2E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 3.2E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 3.2E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 3.2E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 3.2E-15 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 Pfam PF00232 Glycosyl hydrolase family 1 2 474 1.1E-139 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 SUPERFAMILY SSF51445 2 474 3.32E-161 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site TREPR_0470 e6b623cbd266f9d285542a3b9211255c 479 Gene3D G3DSA:3.20.20.80 1 477 6.4E-150 T 13-10-2018 TREPR_3026 f833199cb2017f07053e5c55271d38c0 538 Gene3D G3DSA:3.90.76.10 57 206 2.3E-111 T 13-10-2018 TREPR_3026 f833199cb2017f07053e5c55271d38c0 538 SUPERFAMILY SSF53850 44 520 1.81E-114 T 13-10-2018 TREPR_3026 f833199cb2017f07053e5c55271d38c0 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 445 2.6E-73 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain TREPR_3026 f833199cb2017f07053e5c55271d38c0 538 Gene3D G3DSA:3.40.190.10 207 512 2.3E-111 T 13-10-2018 TREPR_3026 f833199cb2017f07053e5c55271d38c0 538 Gene3D G3DSA:3.10.105.10 286 503 2.3E-111 T 13-10-2018 TREPR_3026 f833199cb2017f07053e5c55271d38c0 538 PIRSF PIRSF002741 3 521 1.2E-85 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TREPR_3791 ff6319bfc0da733c4cd379e51753e6dd 215 SUPERFAMILY SSF56281 1 199 9.83E-36 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_3791 ff6319bfc0da733c4cd379e51753e6dd 215 SMART SM00849 15 194 8.3E-21 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_3791 ff6319bfc0da733c4cd379e51753e6dd 215 Pfam PF00753 Metallo-beta-lactamase superfamily 22 157 5.1E-22 T 13-10-2018 IPR001279 Metallo-beta-lactamase TREPR_3791 ff6319bfc0da733c4cd379e51753e6dd 215 Gene3D G3DSA:3.60.15.10 1 209 1.0E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TREPR_1444 844e2b7bfa745e93f559c66eaca2d290 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 270 4.0E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1444 844e2b7bfa745e93f559c66eaca2d290 281 SUPERFAMILY SSF161098 12 280 3.66E-59 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1444 844e2b7bfa745e93f559c66eaca2d290 281 Gene3D G3DSA:1.10.3720.10 5 272 5.2E-55 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_2628 a7f396fbd3df0545b2f5ef3ac64b9870 251 SUPERFAMILY SSF53271 96 249 1.27E-14 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_2628 a7f396fbd3df0545b2f5ef3ac64b9870 251 Gene3D G3DSA:3.40.50.2020 115 250 2.6E-10 T 13-10-2018 TREPR_1157 55d4f8fee26347c6099aaf69c137dd9d 208 SUPERFAMILY SSF52980 63 187 7.69E-13 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_3607 798e67c691d99f382a2e301224891cdb 184 Gene3D G3DSA:3.40.109.10 1 183 9.4E-39 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_3607 798e67c691d99f382a2e301224891cdb 184 Pfam PF00881 Nitroreductase family 10 165 1.0E-23 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_3607 798e67c691d99f382a2e301224891cdb 184 SUPERFAMILY SSF55469 3 171 5.5E-32 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_2136 3fe6d5444b56037e860423fe8a18e2dd 343 Pfam PF09084 NMT1/THI5 like 64 268 4.5E-11 T 13-10-2018 IPR015168 SsuA/THI5-like TREPR_2136 3fe6d5444b56037e860423fe8a18e2dd 343 SUPERFAMILY SSF53850 54 275 8.83E-24 T 13-10-2018 TREPR_2136 3fe6d5444b56037e860423fe8a18e2dd 343 Gene3D G3DSA:3.40.190.10 46 157 2.9E-10 T 13-10-2018 TREPR_2136 3fe6d5444b56037e860423fe8a18e2dd 343 Gene3D G3DSA:3.40.190.10 158 335 5.4E-13 T 13-10-2018 TREPR_0289 c1c6548444488734cac5bb7d5f705d55 254 Gene3D G3DSA:3.20.20.60 1 254 2.3E-79 T 13-10-2018 TREPR_0289 c1c6548444488734cac5bb7d5f705d55 254 SUPERFAMILY SSF51621 1 253 2.83E-68 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TREPR_0289 c1c6548444488734cac5bb7d5f705d55 254 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 17 240 2.0E-33 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TREPR_1314 2bc186212bd2fe9ff8e7e71b356a25e2 200 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 51 179 4.6E-27 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TREPR_2337 e2dd0221a6ea0b6f60122d300a55024c 229 Gene3D G3DSA:1.25.40.10 69 221 1.1E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2337 e2dd0221a6ea0b6f60122d300a55024c 229 SUPERFAMILY SSF48452 103 213 5.69E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2337 e2dd0221a6ea0b6f60122d300a55024c 229 SMART SM00028 140 173 4.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2337 e2dd0221a6ea0b6f60122d300a55024c 229 SMART SM00028 103 136 1.6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_2337 e2dd0221a6ea0b6f60122d300a55024c 229 Pfam PF13432 Tetratricopeptide repeat 144 204 7.6E-7 T 13-10-2018 TREPR_3119 f30ae8ca1fac3d249908abdca8e8b4d6 115 Pfam PF04383 KilA-N domain 5 104 6.7E-13 T 13-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TREPR_3119 f30ae8ca1fac3d249908abdca8e8b4d6 115 SMART SM01252 10 115 1.2E-16 T 13-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding TREPR_0187 40c110fd0a8e43cf56249de2ead73e80 95 SUPERFAMILY SSF143120 2 44 1.18E-5 T 13-10-2018 IPR036165 YefM-like superfamily TREPR_0187 40c110fd0a8e43cf56249de2ead73e80 95 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 56 1.7E-5 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TREPR_3383 f0e7fe3bd1b2a76ed3d7fdf73046ef94 183 Pfam PF02417 Chromate transporter 5 178 1.6E-41 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TREPR_1252 f48b5083334d818d5cf0d89deb9f3599 381 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 59 338 4.0E-40 T 13-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TREPR_1252 f48b5083334d818d5cf0d89deb9f3599 381 Gene3D G3DSA:3.40.50.2300 45 309 9.7E-107 T 13-10-2018 TREPR_1252 f48b5083334d818d5cf0d89deb9f3599 381 Gene3D G3DSA:3.40.50.2300 154 374 9.7E-107 T 13-10-2018 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 SUPERFAMILY SSF48452 365 471 6.64E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 Pfam PF13475 Domain of unknown function (DUF4116) 85 131 4.2E-6 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 Pfam PF13475 Domain of unknown function (DUF4116) 157 204 1.5E-6 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 Pfam PF13475 Domain of unknown function (DUF4116) 109 154 7.1E-8 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 Pfam PF13475 Domain of unknown function (DUF4116) 181 228 4.1E-9 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 Pfam PF13475 Domain of unknown function (DUF4116) 207 252 1.2E-7 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 Pfam PF07719 Tetratricopeptide repeat 431 460 4.2E-5 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 Gene3D G3DSA:1.25.40.10 333 475 1.0E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 Pfam PF13181 Tetratricopeptide repeat 366 393 0.0042 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 SMART SM00028 394 427 0.004 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 SMART SM00028 360 393 2.7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1856 01e522b4f15eb4285bab861be4749ec8 475 SMART SM00028 428 461 0.066 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TREPR_1773 76d663f54eeff76ceaedd1e20d5dc5a4 771 Gene3D G3DSA:3.40.1060.10 191 303 8.1E-20 T 13-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TREPR_1773 76d663f54eeff76ceaedd1e20d5dc5a4 771 Pfam PF00330 Aconitase family (aconitate hydratase) 48 477 3.6E-79 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TREPR_1773 76d663f54eeff76ceaedd1e20d5dc5a4 771 SUPERFAMILY SSF52016 518 769 1.1E-29 T 13-10-2018 TREPR_1773 76d663f54eeff76ceaedd1e20d5dc5a4 771 Gene3D G3DSA:3.30.499.10 19 190 2.2E-21 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TREPR_1773 76d663f54eeff76ceaedd1e20d5dc5a4 771 Gene3D G3DSA:3.30.499.10 344 489 1.3E-28 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TREPR_1773 76d663f54eeff76ceaedd1e20d5dc5a4 771 SUPERFAMILY SSF53732 37 491 1.22E-111 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TREPR_3886 679cbe186e4e991c32afccbcdb2edfe8 363 Pfam PF01548 Transposase 4 153 2.2E-13 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TREPR_3886 679cbe186e4e991c32afccbcdb2edfe8 363 Pfam PF02371 Transposase IS116/IS110/IS902 family 218 282 7.2E-9 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 TREPR_0605 d0cc6f643d5635d1a032221f12eb5931 91 SUPERFAMILY SSF89447 18 80 4.34E-9 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily TREPR_0605 d0cc6f643d5635d1a032221f12eb5931 91 Gene3D G3DSA:2.10.260.10 16 91 4.9E-25 T 13-10-2018 TREPR_0605 d0cc6f643d5635d1a032221f12eb5931 91 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 22 63 7.8E-9 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 TREPR_1245 ee75ea1cb26c229287380b0a3cc628d1 86 Pfam PF04439 Streptomycin adenylyltransferase 5 71 7.0E-22 T 13-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase TREPR_1245 ee75ea1cb26c229287380b0a3cc628d1 86 Gene3D G3DSA:3.30.460.10 7 82 2.4E-22 T 13-10-2018 TREPR_1245 ee75ea1cb26c229287380b0a3cc628d1 86 SUPERFAMILY SSF81301 5 70 5.43E-20 T 13-10-2018 TREPR_0758 de2a122064ee83d620b1aca083d7ffd3 332 Pfam PF12127 SigmaW regulon antibacterial 12 326 1.2E-153 T 13-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity TREPR_0758 de2a122064ee83d620b1aca083d7ffd3 332 Hamap MF_01562 UPF0365 protein . 4 331 45.218 T 13-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity TREPR_3410 5d12a6a4c455057c3645a31b3dfa3741 1023 Gene3D G3DSA:2.60.40.10 391 497 2.3E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_3410 5d12a6a4c455057c3645a31b3dfa3741 1023 Gene3D G3DSA:2.60.40.10 896 1012 3.3E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_3410 5d12a6a4c455057c3645a31b3dfa3741 1023 Gene3D G3DSA:2.60.40.10 281 390 3.7E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_3410 5d12a6a4c455057c3645a31b3dfa3741 1023 Gene3D G3DSA:2.60.40.10 575 691 1.1E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_2164 3dc65f8ba2a409ffeadb76af83182012 208 Pfam PF08241 Methyltransferase domain 48 147 9.2E-15 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TREPR_2164 3dc65f8ba2a409ffeadb76af83182012 208 Gene3D G3DSA:3.40.50.150 22 208 2.4E-29 T 13-10-2018 TREPR_2164 3dc65f8ba2a409ffeadb76af83182012 208 SUPERFAMILY SSF53335 20 192 8.2E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0460 f5c97ca05607429fede3793df100cb86 573 Gene3D G3DSA:3.30.930.10 255 572 6.3E-81 T 13-10-2018 TREPR_0460 f5c97ca05607429fede3793df100cb86 573 Pfam PF01409 tRNA synthetases class II core domain (F) 283 563 5.8E-76 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 TREPR_0460 f5c97ca05607429fede3793df100cb86 573 Hamap MF_00282 Phenylalanine--tRNA ligase alpha subunit [pheS]. 11 567 34.299 T 13-10-2018 IPR022917 Phenylalanine-tRNA ligase alpha subunit, bacterial/archaeal GO:0004826 KEGG: 00970+6.1.1.20 TREPR_0460 f5c97ca05607429fede3793df100cb86 573 SUPERFAMILY SSF46785 12 81 5.21E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0460 f5c97ca05607429fede3793df100cb86 573 SUPERFAMILY SSF55681 283 565 1.31E-55 T 13-10-2018 TREPR_0460 f5c97ca05607429fede3793df100cb86 573 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 257 563 1.3E-99 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TREPR_3417 7d3fd35e80558b3be972c1199cff809b 116 PIRSF PIRSF039032 1 111 4.9E-32 T 13-10-2018 IPR009387 Toxin HigB-2 TREPR_3417 7d3fd35e80558b3be972c1199cff809b 116 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 3 106 7.3E-11 T 13-10-2018 IPR009387 Toxin HigB-2 TREPR_1782 e38e9e88ff4e6be0057fb552930c01ab 537 Pfam PF07969 Amidohydrolase family 444 512 2.0E-7 T 13-10-2018 IPR013108 Amidohydrolase 3 TREPR_1782 e38e9e88ff4e6be0057fb552930c01ab 537 Pfam PF07969 Amidohydrolase family 45 227 1.1E-8 T 13-10-2018 IPR013108 Amidohydrolase 3 TREPR_1782 e38e9e88ff4e6be0057fb552930c01ab 537 SUPERFAMILY SSF51338 1 523 7.41E-18 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_1782 e38e9e88ff4e6be0057fb552930c01ab 537 Gene3D G3DSA:3.20.20.140 431 467 1.4E-5 T 13-10-2018 TREPR_1782 e38e9e88ff4e6be0057fb552930c01ab 537 Gene3D G3DSA:2.30.40.10 468 492 1.4E-5 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TREPR_1782 e38e9e88ff4e6be0057fb552930c01ab 537 SUPERFAMILY SSF51556 57 467 6.11E-46 T 13-10-2018 IPR032466 Metal-dependent hydrolase TREPR_1782 e38e9e88ff4e6be0057fb552930c01ab 537 Gene3D G3DSA:3.20.20.140 56 324 8.2E-62 T 13-10-2018 TREPR_2221 4691692f0fe092cad13e216888961bc2 385 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 381 28.691 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2221 4691692f0fe092cad13e216888961bc2 385 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 192 320 6.3E-27 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 TREPR_2221 4691692f0fe092cad13e216888961bc2 385 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 143 6.9E-37 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_2221 4691692f0fe092cad13e216888961bc2 385 SUPERFAMILY SSF53756 4 380 1.3E-84 T 13-10-2018 TREPR_2221 4691692f0fe092cad13e216888961bc2 385 Gene3D G3DSA:3.40.50.2000 179 365 1.0E-37 T 13-10-2018 TREPR_2221 4691692f0fe092cad13e216888961bc2 385 Gene3D G3DSA:3.40.50.2000 2 178 7.9E-55 T 13-10-2018 TREPR_2221 4691692f0fe092cad13e216888961bc2 385 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 377 1.0E-75 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TREPR_1030 aa9d89d48513604b8cc1195d5757b83c 141 Pfam PF00472 RF-1 domain 15 134 1.8E-18 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TREPR_1030 aa9d89d48513604b8cc1195d5757b83c 141 SUPERFAMILY SSF110916 16 96 1.44E-9 T 13-10-2018 TREPR_1030 aa9d89d48513604b8cc1195d5757b83c 141 Gene3D G3DSA:3.30.160.20 7 139 7.5E-34 T 13-10-2018 TREPR_1030 aa9d89d48513604b8cc1195d5757b83c 141 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 20 36 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TREPR_0175 962134690e151b393298f85e9ebda540 637 Gene3D G3DSA:3.40.50.12780 300 499 2.0E-36 T 13-10-2018 TREPR_0175 962134690e151b393298f85e9ebda540 637 ProSitePatterns PS00455 Putative AMP-binding domain signature. 190 201 - T 13-10-2018 IPR020845 AMP-binding, conserved site TREPR_0175 962134690e151b393298f85e9ebda540 637 SUPERFAMILY SSF56801 4 552 2.09E-104 T 13-10-2018 TREPR_0175 962134690e151b393298f85e9ebda540 637 Pfam PF00501 AMP-binding enzyme 28 504 1.1E-96 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TREPR_0175 962134690e151b393298f85e9ebda540 637 Gene3D G3DSA:3.40.50.12780 2 299 2.8E-47 T 13-10-2018 TREPR_2726 4231163b98d90871b14837a461dba3f0 187 Gene3D G3DSA:3.10.450.700 1 78 4.5E-24 T 13-10-2018 TREPR_2726 4231163b98d90871b14837a461dba3f0 187 Pfam PF11680 Protein of unknown function (DUF3276) 6 76 1.8E-10 T 13-10-2018 IPR021694 Protein of unknown function DUF3276 TREPR_2726 4231163b98d90871b14837a461dba3f0 187 SMART SM00712 6 73 1.2E-19 T 13-10-2018 IPR006628 Purine-rich element binding protein family TREPR_1078 090a13168c082aaf2a7ef1a307d264be 133 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 127 18.19 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TREPR_1078 090a13168c082aaf2a7ef1a307d264be 133 TIGRFAM TIGR00494 crcB: protein CrcB 12 123 8.3E-26 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TREPR_1078 090a13168c082aaf2a7ef1a307d264be 133 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 12 122 3.9E-21 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TREPR_3870 e5dbc345cba621cb400ce6d7c0df5752 132 Pfam PF05168 HEPN domain 10 125 1.6E-22 T 13-10-2018 IPR007842 HEPN domain TREPR_3870 e5dbc345cba621cb400ce6d7c0df5752 132 Gene3D G3DSA:1.20.120.330 3 130 5.6E-28 T 13-10-2018 TREPR_3870 e5dbc345cba621cb400ce6d7c0df5752 132 SUPERFAMILY SSF81593 13 128 1.06E-19 T 13-10-2018 TREPR_3870 e5dbc345cba621cb400ce6d7c0df5752 132 SMART SM00748 14 121 3.4E-5 T 13-10-2018 IPR007842 HEPN domain TREPR_3073 9654cef8c2cf0a211a141a8572c4ebaa 475 SUPERFAMILY SSF52540 3 179 1.98E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3073 9654cef8c2cf0a211a141a8572c4ebaa 475 Gene3D G3DSA:3.40.50.300 3 207 4.5E-14 T 13-10-2018 TREPR_3073 9654cef8c2cf0a211a141a8572c4ebaa 475 Pfam PF07728 AAA domain (dynein-related subfamily) 25 147 1.0E-5 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TREPR_3839 45070987c22450b7cd7701fd5c288def 123 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 122 3.0E-39 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TREPR_3839 45070987c22450b7cd7701fd5c288def 123 Pfam PF01597 Glycine cleavage H-protein 7 122 3.5E-38 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate TREPR_3839 45070987c22450b7cd7701fd5c288def 123 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 123 33.572 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TREPR_3839 45070987c22450b7cd7701fd5c288def 123 Gene3D G3DSA:2.40.50.100 1 122 1.3E-39 T 13-10-2018 TREPR_3839 45070987c22450b7cd7701fd5c288def 123 SUPERFAMILY SSF51230 1 122 4.19E-33 T 13-10-2018 IPR011053 Single hybrid motif TREPR_0970 22ddca19e96363402578c43b3387b43d 574 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 381 502 4.8E-30 T 13-10-2018 IPR025299 CstA, C-terminal domain TREPR_0970 22ddca19e96363402578c43b3387b43d 574 Pfam PF02554 Carbon starvation protein CstA 1 351 2.7E-122 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 TREPR_0779 66d4ba69029f0e91fbc0cf4050d8d39d 168 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 149 3.1E-35 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 TREPR_0779 66d4ba69029f0e91fbc0cf4050d8d39d 168 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 2 151 20.576 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 TREPR_0779 66d4ba69029f0e91fbc0cf4050d8d39d 168 Pfam PF01029 NusB family 6 147 2.8E-29 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TREPR_0779 66d4ba69029f0e91fbc0cf4050d8d39d 168 SUPERFAMILY SSF48013 3 152 8.37E-32 T 13-10-2018 IPR035926 NusB-like superfamily TREPR_0779 66d4ba69029f0e91fbc0cf4050d8d39d 168 Gene3D G3DSA:1.10.940.10 1 164 3.4E-37 T 13-10-2018 IPR035926 NusB-like superfamily TREPR_3017 ae742eabe989c59bfd61a73d5d338e0c 251 Gene3D G3DSA:3.40.50.300 12 251 9.9E-67 T 13-10-2018 TREPR_3017 ae742eabe989c59bfd61a73d5d338e0c 251 SMART SM00382 38 231 6.8E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_3017 ae742eabe989c59bfd61a73d5d338e0c 251 SUPERFAMILY SSF52540 12 246 8.99E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3017 ae742eabe989c59bfd61a73d5d338e0c 251 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 14 251 9.9E-108 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 TREPR_3017 ae742eabe989c59bfd61a73d5d338e0c 251 Pfam PF00005 ABC transporter 30 176 2.9E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1659 5007557ecb775e9df5fcdcc644d89adb 336 Gene3D G3DSA:3.40.50.180 155 334 1.4E-60 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal TREPR_1659 5007557ecb775e9df5fcdcc644d89adb 336 PIRSF PIRSF000876 1 336 1.1E-96 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TREPR_1659 5007557ecb775e9df5fcdcc644d89adb 336 SUPERFAMILY SSF52172 3 140 3.7E-27 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1659 5007557ecb775e9df5fcdcc644d89adb 336 SUPERFAMILY SSF52738 150 334 7.06E-58 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal TREPR_1659 5007557ecb775e9df5fcdcc644d89adb 336 Gene3D G3DSA:3.40.50.12740 2 154 1.2E-28 T 13-10-2018 TREPR_1659 5007557ecb775e9df5fcdcc644d89adb 336 Pfam PF00072 Response regulator receiver domain 5 104 1.8E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1659 5007557ecb775e9df5fcdcc644d89adb 336 Pfam PF01339 CheB methylesterase 155 330 1.3E-53 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TREPR_1659 5007557ecb775e9df5fcdcc644d89adb 336 SMART SM00448 2 122 4.2E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1659 5007557ecb775e9df5fcdcc644d89adb 336 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 335 32.178 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TREPR_3723 04ad89133703b0e93761aa8f12359833 145 Pfam PF01850 PIN domain 4 135 1.1E-14 T 13-10-2018 IPR002716 PIN domain TREPR_3723 04ad89133703b0e93761aa8f12359833 145 Gene3D G3DSA:3.40.50.1010 2 117 5.0E-6 T 13-10-2018 TREPR_3723 04ad89133703b0e93761aa8f12359833 145 SUPERFAMILY SSF88723 1 134 1.09E-8 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_2404 b3f0b594058bf5482ff9c6dbbec72ed9 897 Pfam PF02096 60Kd inner membrane protein 32 218 3.1E-24 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TREPR_2404 b3f0b594058bf5482ff9c6dbbec72ed9 897 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 31 218 4.2E-27 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2404 b3f0b594058bf5482ff9c6dbbec72ed9 897 SUPERFAMILY SSF53649 489 776 1.92E-6 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TREPR_0051 197b4196a1e4acc155e200f45e0325e7 307 Gene3D G3DSA:3.30.1380.10 187 290 4.9E-13 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TREPR_0051 197b4196a1e4acc155e200f45e0325e7 307 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 215 291 3.2E-17 T 13-10-2018 IPR039561 Peptidase M15C GO:0008233 TREPR_0051 197b4196a1e4acc155e200f45e0325e7 307 SUPERFAMILY SSF55166 195 296 1.49E-17 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TREPR_1378 da9d5afff6dc4e13dba61aa85f8f978e 579 SUPERFAMILY SSF52540 329 572 1.43E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_1378 da9d5afff6dc4e13dba61aa85f8f978e 579 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_1378 da9d5afff6dc4e13dba61aa85f8f978e 579 SUPERFAMILY SSF90123 4 321 2.75E-67 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_1378 da9d5afff6dc4e13dba61aa85f8f978e 579 Pfam PF00005 ABC transporter 353 500 1.3E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_1378 da9d5afff6dc4e13dba61aa85f8f978e 579 SMART SM00382 362 554 1.0E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_1378 da9d5afff6dc4e13dba61aa85f8f978e 579 Pfam PF00664 ABC transporter transmembrane region 15 288 2.3E-34 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TREPR_1378 da9d5afff6dc4e13dba61aa85f8f978e 579 Gene3D G3DSA:3.40.50.300 332 577 6.4E-79 T 13-10-2018 TREPR_1378 da9d5afff6dc4e13dba61aa85f8f978e 579 Gene3D G3DSA:1.20.1560.10 1 316 2.9E-77 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TREPR_3652 dfa2b0cdb3896bebc91ba44a9e285ba5 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 187 2.3E-17 T 13-10-2018 TREPR_3652 dfa2b0cdb3896bebc91ba44a9e285ba5 225 Gene3D G3DSA:3.40.50.1000 13 201 3.7E-25 T 13-10-2018 IPR023214 HAD superfamily TREPR_3652 dfa2b0cdb3896bebc91ba44a9e285ba5 225 Gene3D G3DSA:1.10.150.520 24 101 3.7E-25 T 13-10-2018 TREPR_3652 dfa2b0cdb3896bebc91ba44a9e285ba5 225 SUPERFAMILY SSF56784 10 205 3.47E-30 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_0427 06c1e1316c7a300759b341e796694e4d 360 Pfam PF09084 NMT1/THI5 like 53 270 1.1E-31 T 13-10-2018 IPR015168 SsuA/THI5-like TREPR_0427 06c1e1316c7a300759b341e796694e4d 360 Gene3D G3DSA:3.40.190.10 45 297 8.6E-53 T 13-10-2018 TREPR_0427 06c1e1316c7a300759b341e796694e4d 360 Gene3D G3DSA:3.40.190.10 124 231 8.6E-53 T 13-10-2018 TREPR_0427 06c1e1316c7a300759b341e796694e4d 360 SUPERFAMILY SSF53850 44 279 7.25E-23 T 13-10-2018 TREPR_0114 2db07d5cb7e9df0d075f1d5dfdbd54ed 453 SUPERFAMILY SSF52218 39 173 2.25E-10 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_0114 2db07d5cb7e9df0d075f1d5dfdbd54ed 453 Gene3D G3DSA:3.30.1380.10 328 441 8.5E-13 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TREPR_0114 2db07d5cb7e9df0d075f1d5dfdbd54ed 453 SUPERFAMILY SSF55166 354 445 4.19E-15 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TREPR_0114 2db07d5cb7e9df0d075f1d5dfdbd54ed 453 Gene3D G3DSA:3.40.50.360 37 170 2.3E-11 T 13-10-2018 IPR029039 Flavoprotein-like superfamily TREPR_0114 2db07d5cb7e9df0d075f1d5dfdbd54ed 453 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 365 442 5.4E-17 T 13-10-2018 IPR039561 Peptidase M15C GO:0008233 TREPR_0221 45c4a88983c1cd0d50e944401dc06cd0 280 Gene3D G3DSA:1.10.3720.10 46 279 2.7E-53 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0221 45c4a88983c1cd0d50e944401dc06cd0 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 268 5.3E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0221 45c4a88983c1cd0d50e944401dc06cd0 280 SUPERFAMILY SSF161098 50 267 3.53E-50 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3496 19e60ec5c7601b0d6e3059b715408fa4 184 SUPERFAMILY SSF117782 33 101 4.84E-6 T 13-10-2018 IPR035439 UPF0145 domain superfamily TREPR_3496 19e60ec5c7601b0d6e3059b715408fa4 184 Gene3D G3DSA:3.30.110.70 7 129 2.2E-5 T 13-10-2018 TREPR_2836 b9614145021120a6a514829addecf5c0 304 Gene3D G3DSA:2.60.120.380 206 303 2.5E-10 T 13-10-2018 TREPR_2836 b9614145021120a6a514829addecf5c0 304 Gene3D G3DSA:3.80.10.10 12 202 2.4E-35 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_2836 b9614145021120a6a514829addecf5c0 304 Pfam PF13306 Leucine rich repeats (6 copies) 68 169 2.5E-27 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_2836 b9614145021120a6a514829addecf5c0 304 SUPERFAMILY SSF52058 61 161 4.01E-12 T 13-10-2018 TREPR_2760 bf5dc2b6077f401b6e7f1898858799b1 483 Gene3D G3DSA:3.30.70.1230 102 303 2.2E-5 T 13-10-2018 IPR029787 Nucleotide cyclase TREPR_3118 f444c271be64d74752aa37275b0cde90 332 Gene3D G3DSA:3.40.1350.10 178 298 8.9E-8 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TREPR_3118 f444c271be64d74752aa37275b0cde90 332 Pfam PF06250 Protein of unknown function (DUF1016) 10 318 3.8E-111 T 13-10-2018 IPR009362 Protein of unknown function DUF1016 TREPR_1692 c1326afde19dd9e8417671f67d48abc0 103 Gene3D G3DSA:3.30.2310.20 1 97 8.5E-19 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_1692 c1326afde19dd9e8417671f67d48abc0 103 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 92 4.7E-15 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TREPR_1692 c1326afde19dd9e8417671f67d48abc0 103 SUPERFAMILY SSF143011 1 88 4.9E-8 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_0731 103d3fe0d5adc920c03af4cebdfc9c98 1060 Pfam PF13476 AAA domain 5 338 1.2E-25 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain TREPR_0731 103d3fe0d5adc920c03af4cebdfc9c98 1060 SUPERFAMILY SSF52540 2 1053 3.63E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_0731 103d3fe0d5adc920c03af4cebdfc9c98 1060 Gene3D G3DSA:3.40.50.300 781 1054 1.8E-21 T 13-10-2018 TREPR_0731 103d3fe0d5adc920c03af4cebdfc9c98 1060 Pfam PF13558 Putative exonuclease SbcCD, C subunit 956 1015 2.2E-10 T 13-10-2018 TREPR_0731 103d3fe0d5adc920c03af4cebdfc9c98 1060 Gene3D G3DSA:3.40.50.300 1 311 2.1E-42 T 13-10-2018 TREPR_3276 5766b75e06db6cafd0912a7a5d792dc8 365 Pfam PF01032 FecCD transport family 35 359 3.5E-95 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TREPR_3276 5766b75e06db6cafd0912a7a5d792dc8 365 Gene3D G3DSA:1.10.3470.10 22 364 1.5E-106 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_3276 5766b75e06db6cafd0912a7a5d792dc8 365 SUPERFAMILY SSF81345 18 359 2.35E-83 T 13-10-2018 IPR037294 ABC transporter, BtuC-like TREPR_0467 0a2c67c8e5cf49bb132b9bd1b4d8492c 98 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 91 3.0E-20 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 TREPR_0467 0a2c67c8e5cf49bb132b9bd1b4d8492c 98 SUPERFAMILY SSF52794 1 98 1.07E-31 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 TREPR_0467 0a2c67c8e5cf49bb132b9bd1b4d8492c 98 Gene3D G3DSA:3.40.50.2300 1 98 3.0E-32 T 13-10-2018 TREPR_0878 112874574d35db9bc8a74bfd836262c5 237 SUPERFAMILY SSF55729 50 212 8.47E-13 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_0878 112874574d35db9bc8a74bfd836262c5 237 Gene3D G3DSA:3.40.630.30 37 227 4.0E-11 T 13-10-2018 TREPR_0878 112874574d35db9bc8a74bfd836262c5 237 Pfam PF00583 Acetyltransferase (GNAT) family 52 198 9.7E-7 T 13-10-2018 IPR000182 GNAT domain TREPR_0809 4f003c21e9fdf7392d8438f04912f038 557 SUPERFAMILY SSF53300 337 525 7.97E-8 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_3789 aef7639ab2eaf2c33fd130c7cd7fa3fb 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 423 6.7E-58 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3789 aef7639ab2eaf2c33fd130c7cd7fa3fb 462 Pfam PF01554 MatE 252 411 1.1E-18 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3789 aef7639ab2eaf2c33fd130c7cd7fa3fb 462 Pfam PF01554 MatE 32 192 3.4E-28 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3789 aef7639ab2eaf2c33fd130c7cd7fa3fb 462 PIRSF PIRSF006603 6 454 4.0E-84 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2794 e4c83f5ed564d1e528da9f4f8c4764f6 384 Gene3D G3DSA:1.10.260.50 14 283 2.8E-90 T 13-10-2018 TREPR_2794 e4c83f5ed564d1e528da9f4f8c4764f6 384 Pfam PF00266 Aminotransferase class-V 26 373 1.1E-44 T 13-10-2018 IPR000192 Aminotransferase class V domain TREPR_2794 e4c83f5ed564d1e528da9f4f8c4764f6 384 Gene3D G3DSA:3.90.1150.10 4 377 2.8E-90 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_2794 e4c83f5ed564d1e528da9f4f8c4764f6 384 SUPERFAMILY SSF53383 24 382 6.62E-67 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_2794 e4c83f5ed564d1e528da9f4f8c4764f6 384 PIRSF PIRSF005572 2 384 5.3E-85 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TREPR_2794 e4c83f5ed564d1e528da9f4f8c4764f6 384 Gene3D G3DSA:3.40.640.10 56 237 2.8E-90 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_0046 7052a0c500e142490a98efe78e4bec5e 992 SUPERFAMILY SSF51126 613 880 4.54E-9 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_0046 7052a0c500e142490a98efe78e4bec5e 992 SMART SM00710 796 817 410.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0046 7052a0c500e142490a98efe78e4bec5e 992 SMART SM00710 865 898 6700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0046 7052a0c500e142490a98efe78e4bec5e 992 SMART SM00710 591 612 1100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0046 7052a0c500e142490a98efe78e4bec5e 992 SMART SM00710 740 761 1000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0046 7052a0c500e142490a98efe78e4bec5e 992 SMART SM00710 653 674 4400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0046 7052a0c500e142490a98efe78e4bec5e 992 SMART SM00710 768 789 500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0046 7052a0c500e142490a98efe78e4bec5e 992 SMART SM00710 828 853 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0046 7052a0c500e142490a98efe78e4bec5e 992 SMART SM00710 679 705 1900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0192 cbdeee5f25599224603def38930b126b 488 Pfam PF10531 SLBB domain 207 262 8.3E-9 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0192 cbdeee5f25599224603def38930b126b 488 Pfam PF10531 SLBB domain 388 424 0.007 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_0192 cbdeee5f25599224603def38930b126b 488 Gene3D G3DSA:3.10.560.10 203 287 8.7E-9 T 13-10-2018 TREPR_0192 cbdeee5f25599224603def38930b126b 488 Gene3D G3DSA:3.10.560.10 118 202 2.9E-7 T 13-10-2018 TREPR_0192 cbdeee5f25599224603def38930b126b 488 SUPERFAMILY SSF142984 206 239 4.18E-5 T 13-10-2018 TREPR_3851 913507d97e576d6fee9d182217ec0458 63 SUPERFAMILY SSF143100 8 43 2.75E-6 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like TREPR_2502 df1e77c698f94ab01a9deda54ad493ba 541 Pfam PF09822 ABC-type uncharacterized transport system 30 285 1.0E-50 T 13-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 TREPR_0182 fae6c61c28a30dc62f7c5fe399fd0db4 171 Pfam PF00293 NUDIX domain 36 155 3.0E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TREPR_0182 fae6c61c28a30dc62f7c5fe399fd0db4 171 Gene3D G3DSA:3.90.79.10 33 171 3.8E-20 T 13-10-2018 TREPR_0182 fae6c61c28a30dc62f7c5fe399fd0db4 171 SUPERFAMILY SSF55811 3 169 3.66E-27 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TREPR_2566 dcfc5bd00514f590ac8d08b4cc056e84 326 SUPERFAMILY SSF102405 81 285 4.24E-35 T 13-10-2018 TREPR_2566 dcfc5bd00514f590ac8d08b4cc056e84 326 Pfam PF02481 DNA recombination-mediator protein A 74 277 2.6E-67 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TREPR_2566 dcfc5bd00514f590ac8d08b4cc056e84 326 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 287 1.4E-68 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TREPR_2566 dcfc5bd00514f590ac8d08b4cc056e84 326 Gene3D G3DSA:3.40.50.450 2 290 9.7E-83 T 13-10-2018 TREPR_2379 070c32823ca66665bef3f41b912a1ed8 284 SUPERFAMILY SSF53474 94 163 8.4E-5 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_3481 52d874edd6ae0e8c4cc028ac16c3201a 170 Pfam PF10135 Rod binding protein 112 156 2.1E-11 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal TREPR_0055 aa35b3bb5d96d359bf3ec0f3047dcdfa 256 Gene3D G3DSA:1.10.3210.10 13 175 2.6E-9 T 13-10-2018 TREPR_0055 aa35b3bb5d96d359bf3ec0f3047dcdfa 256 SUPERFAMILY SSF109604 40 167 8.24E-8 T 13-10-2018 TREPR_0055 aa35b3bb5d96d359bf3ec0f3047dcdfa 256 SMART SM00471 41 178 0.0012 T 13-10-2018 IPR003607 HD/PDEase domain TREPR_2907 1cc36af97bd524de82cd5f27293a244d 185 Pfam PF03551 Transcriptional regulator PadR-like family 12 83 2.3E-13 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal TREPR_2907 1cc36af97bd524de82cd5f27293a244d 185 Pfam PF10400 Virulence activator alpha C-term 97 180 1.3E-13 T 13-10-2018 IPR018309 Transcription regulator PadR, C-terminal TREPR_2907 1cc36af97bd524de82cd5f27293a244d 185 Gene3D G3DSA:1.10.10.10 7 91 1.5E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_2907 1cc36af97bd524de82cd5f27293a244d 185 SUPERFAMILY SSF46785 8 180 4.91E-33 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TREPR_0846 e1a8a8c71a96541d388d5037b5e85c9a 101 SUPERFAMILY SSF50475 3 88 7.65E-13 T 13-10-2018 TREPR_0846 e1a8a8c71a96541d388d5037b5e85c9a 101 Gene3D G3DSA:2.30.110.10 2 100 1.3E-11 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TREPR_0846 e1a8a8c71a96541d388d5037b5e85c9a 101 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 3 85 9.0E-10 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TREPR_3243 7f6eac67a2e3f975486c8a4c34ff22d4 206 Gene3D G3DSA:2.20.28.10 4 41 1.1E-13 T 13-10-2018 TREPR_3243 7f6eac67a2e3f975486c8a4c34ff22d4 206 Gene3D G3DSA:3.30.479.10 50 197 1.3E-18 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 TREPR_3243 7f6eac67a2e3f975486c8a4c34ff22d4 206 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 54 192 5.1E-16 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 TREPR_3243 7f6eac67a2e3f975486c8a4c34ff22d4 206 SUPERFAMILY SSF55620 52 190 4.73E-18 T 13-10-2018 TREPR_3243 7f6eac67a2e3f975486c8a4c34ff22d4 206 SUPERFAMILY SSF57802 5 39 8.7E-11 T 13-10-2018 TREPR_2189 182bb75f7896f4bdf171688e4f90a93c 184 SUPERFAMILY SSF54001 23 136 2.22E-9 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_2189 182bb75f7896f4bdf171688e4f90a93c 184 Pfam PF00877 NlpC/P60 family 34 133 1.9E-6 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain TREPR_2189 182bb75f7896f4bdf171688e4f90a93c 184 Gene3D G3DSA:3.90.1720.10 15 154 1.1E-11 T 13-10-2018 TREPR_3670 229b22e3e1a9925e366d2c561e76313e 87 TIGRFAM TIGR03959 hyd_TM1266: putative iron-only hydrogenase system regulator 3 78 6.2E-27 T 13-10-2018 IPR023860 [FeFe]-hydrogenase system regulator TM1266 TREPR_3670 229b22e3e1a9925e366d2c561e76313e 87 Gene3D G3DSA:3.30.70.1150 1 81 2.8E-25 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal TREPR_3670 229b22e3e1a9925e366d2c561e76313e 87 SUPERFAMILY SSF55021 1 78 5.34E-21 T 13-10-2018 TREPR_1100 a8077b6a7780eee3b271cde40b298744 68 SUPERFAMILY SSF143100 2 61 1.03E-10 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like TREPR_1100 a8077b6a7780eee3b271cde40b298744 68 Gene3D G3DSA:3.30.160.250 1 66 5.9E-11 T 13-10-2018 TREPR_0943 9807a51806b14bbbce16d15e6655138d 419 Pfam PF14281 PD-(D/E)XK nuclease superfamily 42 247 3.7E-13 T 13-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Gene3D G3DSA:2.60.40.3630 45 121 4.1E-21 T 13-10-2018 TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Gene3D G3DSA:2.60.40.3630 376 453 7.6E-18 T 13-10-2018 TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Gene3D G3DSA:2.60.40.3630 294 370 2.1E-20 T 13-10-2018 TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Gene3D G3DSA:2.60.40.3630 128 204 4.3E-21 T 13-10-2018 TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Pfam PF07523 Bacterial Ig-like domain (group 3) 55 119 5.7E-11 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Pfam PF07523 Bacterial Ig-like domain (group 3) 221 286 1.1E-12 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Pfam PF07523 Bacterial Ig-like domain (group 3) 392 452 2.4E-9 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Pfam PF07523 Bacterial Ig-like domain (group 3) 304 368 1.5E-11 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Pfam PF07523 Bacterial Ig-like domain (group 3) 138 203 9.7E-12 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_1347 eb11a157d3adf1812b6f56ee44ebf323 540 Gene3D G3DSA:2.60.40.3630 210 287 8.4E-20 T 13-10-2018 TREPR_0727 e0f560c9d0d52c2dab3ffe2cc75c561b 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 335 2.9E-47 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_3535 08a61dd9e1364bc50d0880683c6ed5da 137 SUPERFAMILY SSF103481 37 136 3.53E-11 T 13-10-2018 TREPR_3535 08a61dd9e1364bc50d0880683c6ed5da 137 Pfam PF00892 EamA-like transporter family 2 136 1.1E-20 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TREPR_0022 2724287baa93f4a4b3cb0add8a0234be 237 Gene3D G3DSA:3.40.50.150 24 214 1.2E-10 T 13-10-2018 TREPR_0022 2724287baa93f4a4b3cb0add8a0234be 237 SUPERFAMILY SSF53335 53 187 2.41E-10 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_1185 27080024d792f6795a8b1d09a091e8fc 401 Gene3D G3DSA:3.40.640.10 46 298 1.0E-121 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TREPR_1185 27080024d792f6795a8b1d09a091e8fc 401 SUPERFAMILY SSF53383 5 399 1.2E-69 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TREPR_1185 27080024d792f6795a8b1d09a091e8fc 401 Gene3D G3DSA:3.90.1150.10 19 396 1.0E-121 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TREPR_1185 27080024d792f6795a8b1d09a091e8fc 401 TIGRFAM TIGR03542 DAPAT_plant: LL-diaminopimelate aminotransferase 3 398 5.4E-152 T 13-10-2018 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 GO:0008483 KEGG: 00300+2.6.1.83|MetaCyc: PWY-5097 TREPR_1185 27080024d792f6795a8b1d09a091e8fc 401 Pfam PF00155 Aminotransferase class I and II 35 396 1.3E-32 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TREPR_1185 27080024d792f6795a8b1d09a091e8fc 401 Hamap MF_01642 LL-diaminopimelate aminotransferase [dapL]. 3 399 45.35 T 13-10-2018 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 GO:0008483 KEGG: 00300+2.6.1.83|MetaCyc: PWY-5097 TREPR_2554 43e0454a63cae00aa88a8f52c8e53b5b 152 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 141 8.3E-27 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TREPR_2554 43e0454a63cae00aa88a8f52c8e53b5b 152 Pfam PF02050 Flagellar FliJ protein 21 139 6.8E-16 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TREPR_1123 12108102678fd61e92f685864c1c8212 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 283 2.4E-42 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_3520 4f4c38c5f8e9c92edd6339a290a6038b 758 Gene3D G3DSA:2.130.10.10 493 737 3.1E-9 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TREPR_3520 4f4c38c5f8e9c92edd6339a290a6038b 758 SUPERFAMILY SSF110296 514 736 4.71E-18 T 13-10-2018 TREPR_2455 2db4917376eae811a2a1188fe93e5c89 123 SUPERFAMILY SSF47226 15 114 1.44E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_2455 2db4917376eae811a2a1188fe93e5c89 123 Pfam PF01627 Hpt domain 33 102 9.8E-9 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TREPR_2455 2db4917376eae811a2a1188fe93e5c89 123 Gene3D G3DSA:1.20.120.160 12 122 6.7E-18 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 TREPR_1097 8b343b3407bc403ca6ae0d3eea77361d 386 Pfam PF03787 RAMP superfamily 11 175 1.2E-6 T 13-10-2018 IPR005537 CRISPR type III-associated RAMP protein TREPR_2584 58eafffd6d0c0767f2a78af449701c96 137 Gene3D G3DSA:2.40.70.10 26 135 4.0E-9 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily TREPR_2584 58eafffd6d0c0767f2a78af449701c96 137 Pfam PF13975 gag-polyprotein putative aspartyl protease 29 106 1.0E-6 T 13-10-2018 TREPR_2584 58eafffd6d0c0767f2a78af449701c96 137 SUPERFAMILY SSF50630 28 116 9.65E-7 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily TREPR_2611 a653916f2f3c54b1c54da6f343f2bcda 227 Pfam PF10979 Protein of unknown function (DUF2786) 9 46 2.5E-12 T 13-10-2018 IPR024498 Domain of unknown function DUF2786 TREPR_2370 e9a9fac24cd98280248872c70232c758 553 Pfam PF14052 Capsule assembly protein Wzi 198 459 2.6E-10 T 13-10-2018 IPR026950 Capsule assembly protein Wzi TREPR_2370 e9a9fac24cd98280248872c70232c758 553 Gene3D G3DSA:2.40.160.130 145 533 6.9E-12 T 13-10-2018 IPR038636 Capsule assembly protein Wzi superfamily TREPR_0088 1f9dc5c7a33ce382e0b91c9138fd1b5a 295 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 160 1.5E-21 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TREPR_0088 1f9dc5c7a33ce382e0b91c9138fd1b5a 295 SUPERFAMILY SSF51695 8 288 4.54E-38 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 TREPR_1709 418ca220ff2e57eb235a1e51d5366bc4 479 Pfam PF00196 Bacterial regulatory proteins, luxR family 423 474 3.4E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1709 418ca220ff2e57eb235a1e51d5366bc4 479 SMART SM00421 420 477 4.4E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1709 418ca220ff2e57eb235a1e51d5366bc4 479 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 453 465 1.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1709 418ca220ff2e57eb235a1e51d5366bc4 479 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 437 453 1.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1709 418ca220ff2e57eb235a1e51d5366bc4 479 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 423 437 1.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_1709 418ca220ff2e57eb235a1e51d5366bc4 479 Gene3D G3DSA:1.10.10.10 393 478 5.9E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_1709 418ca220ff2e57eb235a1e51d5366bc4 479 SUPERFAMILY SSF46894 412 476 7.14E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_2770 6af7ae87413de8c85805d686f9466a68 460 SUPERFAMILY SSF103473 16 394 1.14E-40 T 13-10-2018 IPR036259 MFS transporter superfamily TREPR_2770 6af7ae87413de8c85805d686f9466a68 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 13-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 TREPR_2770 6af7ae87413de8c85805d686f9466a68 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 440 4.1E-94 T 13-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 TREPR_2770 6af7ae87413de8c85805d686f9466a68 460 Gene3D G3DSA:1.20.1250.20 224 432 1.1E-15 T 13-10-2018 TREPR_2770 6af7ae87413de8c85805d686f9466a68 460 Gene3D G3DSA:1.20.1250.20 11 213 6.6E-15 T 13-10-2018 TREPR_2770 6af7ae87413de8c85805d686f9466a68 460 Pfam PF13347 MFS/sugar transport protein 13 432 6.3E-100 T 13-10-2018 TREPR_2721 299cfb659d06e86d39b28e5fdd626257 131 SUPERFAMILY SSF56349 2 120 2.21E-15 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_2721 299cfb659d06e86d39b28e5fdd626257 131 Gene3D G3DSA:1.10.443.10 58 130 1.7E-7 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_1602 d3ac7310987764ac8968734cc9263b66 299 Gene3D G3DSA:1.10.3720.10 56 297 4.8E-61 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1602 d3ac7310987764ac8968734cc9263b66 299 SUPERFAMILY SSF161098 60 285 1.19E-52 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1602 d3ac7310987764ac8968734cc9263b66 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 286 5.6E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3854 19822a0db618167741c158d24a8d9707 721 Pfam PF13306 Leucine rich repeats (6 copies) 578 693 1.3E-20 T 13-10-2018 IPR026906 Leucine rich repeat 5 TREPR_3854 19822a0db618167741c158d24a8d9707 721 Gene3D G3DSA:3.80.10.10 533 706 1.2E-30 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily TREPR_1667 039d8c2ca5079a73e661f8c613b5ebf8 1080 Pfam PF02687 FtsX-like permease family 980 1070 5.8E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TREPR_3328 48e76ade9b02029e889cf5c0bc581e7c 439 Pfam PF13416 Bacterial extracellular solute-binding protein 51 364 3.9E-35 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_3328 48e76ade9b02029e889cf5c0bc581e7c 439 Gene3D G3DSA:3.40.190.10 37 385 3.4E-94 T 13-10-2018 TREPR_3328 48e76ade9b02029e889cf5c0bc581e7c 439 SUPERFAMILY SSF53850 31 432 4.4E-56 T 13-10-2018 TREPR_3328 48e76ade9b02029e889cf5c0bc581e7c 439 Gene3D G3DSA:3.40.190.10 148 422 3.4E-94 T 13-10-2018 TREPR_0496 94a0afa2cab7778cb53cd56970ce3e41 257 Gene3D G3DSA:2.40.10.220 141 249 3.4E-5 T 13-10-2018 TREPR_3589 ab68fd9ab27b3fb3cd89274193f8adef 223 Gene3D G3DSA:3.40.50.12740 2 219 1.4E-45 T 13-10-2018 TREPR_3589 ab68fd9ab27b3fb3cd89274193f8adef 223 SMART SM00421 156 213 4.1E-4 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3589 ab68fd9ab27b3fb3cd89274193f8adef 223 SUPERFAMILY SSF46894 149 220 4.42E-12 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TREPR_3589 ab68fd9ab27b3fb3cd89274193f8adef 223 Pfam PF00072 Response regulator receiver domain 79 135 9.0E-8 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3589 ab68fd9ab27b3fb3cd89274193f8adef 223 Pfam PF00072 Response regulator receiver domain 4 55 1.1E-8 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_3589 ab68fd9ab27b3fb3cd89274193f8adef 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 213 3.9E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TREPR_3589 ab68fd9ab27b3fb3cd89274193f8adef 223 SUPERFAMILY SSF52172 1 146 3.76E-22 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_3589 ab68fd9ab27b3fb3cd89274193f8adef 223 SMART SM00448 2 135 1.6E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2252 8124592ccd6df513b4a7e43431c97ee2 294 Gene3D G3DSA:3.40.630.10 51 293 5.4E-16 T 13-10-2018 TREPR_2252 8124592ccd6df513b4a7e43431c97ee2 294 SUPERFAMILY SSF53187 60 224 3.01E-13 T 13-10-2018 TREPR_2252 8124592ccd6df513b4a7e43431c97ee2 294 Pfam PF04389 Peptidase family M28 62 220 3.8E-11 T 13-10-2018 IPR007484 Peptidase M28 TREPR_3006 644322062d1ad0e8fb5544a2602cd47f 316 SUPERFAMILY SSF53822 44 315 3.93E-29 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_3006 644322062d1ad0e8fb5544a2602cd47f 316 Pfam PF13407 Periplasmic binding protein domain 46 294 2.2E-18 T 13-10-2018 IPR025997 Periplasmic binding protein TREPR_3006 644322062d1ad0e8fb5544a2602cd47f 316 Gene3D G3DSA:3.40.50.2300 143 311 3.3E-34 T 13-10-2018 TREPR_3006 644322062d1ad0e8fb5544a2602cd47f 316 Gene3D G3DSA:3.40.50.2300 54 307 3.3E-34 T 13-10-2018 TREPR_3298 8ccfbeaa48094dba53b460e8b62db0ad 249 Pfam PF01636 Phosphotransferase enzyme family 28 186 1.0E-13 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase TREPR_3298 8ccfbeaa48094dba53b460e8b62db0ad 249 Gene3D G3DSA:3.90.1200.10 75 242 6.2E-12 T 13-10-2018 TREPR_3298 8ccfbeaa48094dba53b460e8b62db0ad 249 SUPERFAMILY SSF56112 16 207 1.71E-21 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily TREPR_0679 577ae8100cc351c7e3d3551730f6d0ad 398 Gene3D G3DSA:3.20.20.70 108 348 2.6E-11 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TREPR_0679 577ae8100cc351c7e3d3551730f6d0ad 398 SUPERFAMILY SSF102114 130 357 1.11E-17 T 13-10-2018 TREPR_1451 ff500a4e3c6e78c4bc1c81a865aa7cf2 416 Pfam PF10080 Predicted membrane protein (DUF2318) 315 415 5.4E-30 T 13-10-2018 IPR018758 Domain of unknown function DUF2318, membrane TREPR_3682 0951a57e4b1b9c3b26dbe91a761a9e84 132 Gene3D G3DSA:3.40.50.1010 1 122 7.9E-14 T 13-10-2018 TREPR_3682 0951a57e4b1b9c3b26dbe91a761a9e84 132 Pfam PF01850 PIN domain 2 116 2.1E-9 T 13-10-2018 IPR002716 PIN domain TREPR_3682 0951a57e4b1b9c3b26dbe91a761a9e84 132 SUPERFAMILY SSF88723 2 119 1.04E-12 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_0034 d5cca9adeaa3cfc247462cda9d5fce46 205 SUPERFAMILY SSF53639 22 195 8.44E-18 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TREPR_0034 d5cca9adeaa3cfc247462cda9d5fce46 205 Gene3D G3DSA:3.40.225.10 20 204 4.7E-22 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TREPR_0034 d5cca9adeaa3cfc247462cda9d5fce46 205 SMART SM01007 25 203 0.0023 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal TREPR_0034 d5cca9adeaa3cfc247462cda9d5fce46 205 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 48 195 1.2E-11 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal TREPR_0753 d198a21d11a9551864be860057cf7b06 342 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 7 340 3.9E-68 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_0753 d198a21d11a9551864be860057cf7b06 342 SUPERFAMILY SSF51726 6 340 1.96E-54 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_0753 d198a21d11a9551864be860057cf7b06 342 Gene3D G3DSA:3.20.20.210 1 340 1.3E-65 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_2464 e579e88e1e1b5da2030abf72e26ae750 378 SUPERFAMILY SSF53448 69 279 3.94E-6 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_2929 b389ead3e9efed8e46323fc6465e5270 95 SUPERFAMILY SSF54909 1 90 9.97E-26 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel TREPR_2929 b389ead3e9efed8e46323fc6465e5270 95 Gene3D G3DSA:3.30.70.100 2 95 5.1E-31 T 13-10-2018 TREPR_2929 b389ead3e9efed8e46323fc6465e5270 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 5.4E-19 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain TREPR_3493 12c82568d1fecf76712cabb7f3e8413d 302 SUPERFAMILY SSF103481 53 155 1.02E-13 T 13-10-2018 TREPR_3493 12c82568d1fecf76712cabb7f3e8413d 302 SUPERFAMILY SSF103481 198 296 2.09E-12 T 13-10-2018 TREPR_3493 12c82568d1fecf76712cabb7f3e8413d 302 Pfam PF00892 EamA-like transporter family 163 292 3.7E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TREPR_3493 12c82568d1fecf76712cabb7f3e8413d 302 Pfam PF00892 EamA-like transporter family 20 153 8.2E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TREPR_2429 914a73c38fb3f96e1bf22a0ac13dd56c 338 SUPERFAMILY SSF52540 33 315 7.73E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_2429 914a73c38fb3f96e1bf22a0ac13dd56c 338 SMART SM00382 33 230 4.0E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain TREPR_2429 914a73c38fb3f96e1bf22a0ac13dd56c 338 Pfam PF00005 ABC transporter 25 180 2.6E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TREPR_2429 914a73c38fb3f96e1bf22a0ac13dd56c 338 Gene3D G3DSA:3.40.50.300 1 324 7.9E-95 T 13-10-2018 TREPR_2429 914a73c38fb3f96e1bf22a0ac13dd56c 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 314 5.3E-26 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_2429 914a73c38fb3f96e1bf22a0ac13dd56c 338 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TREPR_2429 914a73c38fb3f96e1bf22a0ac13dd56c 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 294 5.5E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TREPR_1359 a0f270435a87e89066ba42a8eff06bc4 464 Pfam PF13941 MutL protein 5 461 1.7E-167 T 13-10-2018 IPR006230 Protein MutL TREPR_1359 a0f270435a87e89066ba42a8eff06bc4 464 PIRSF PIRSF004729 2 463 6.3E-144 T 13-10-2018 IPR006230 Protein MutL TREPR_1359 a0f270435a87e89066ba42a8eff06bc4 464 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 80 461 4.2E-86 T 13-10-2018 IPR006230 Protein MutL TREPR_1770 538ef0292ae0a94b9551f8fdf06889ae 449 Pfam PF02687 FtsX-like permease family 311 442 2.8E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TREPR_1770 538ef0292ae0a94b9551f8fdf06889ae 449 Pfam PF12704 MacB-like periplasmic core domain 31 197 3.6E-12 T 13-10-2018 IPR025857 MacB-like periplasmic core domain TREPR_1107 fe8c8da08fc6e2f9df33bf462a6d4311 385 Pfam PF00557 Metallopeptidase family M24 167 370 1.2E-40 T 13-10-2018 IPR000994 Peptidase M24 TREPR_1107 fe8c8da08fc6e2f9df33bf462a6d4311 385 SUPERFAMILY SSF55920 160 379 1.44E-49 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like TREPR_1107 fe8c8da08fc6e2f9df33bf462a6d4311 385 Gene3D G3DSA:3.90.230.10 158 384 2.2E-53 T 13-10-2018 TREPR_3007 827ecfcb2e4a96f0db82da9eba16fb44 346 Pfam PF01551 Peptidase family M23 235 331 7.1E-30 T 13-10-2018 IPR016047 Peptidase M23 TREPR_3007 827ecfcb2e4a96f0db82da9eba16fb44 346 SUPERFAMILY SSF51261 212 335 1.83E-47 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_3007 827ecfcb2e4a96f0db82da9eba16fb44 346 Gene3D G3DSA:2.70.70.10 178 339 1.7E-43 T 13-10-2018 IPR011055 Duplicated hybrid motif TREPR_1232 a1c31718c6c2f9ebda3e10906f458c98 167 Hamap MF_01398 ATP synthase subunit b [atpF]. 2 139 11.508 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TREPR_1232 a1c31718c6c2f9ebda3e10906f458c98 167 Pfam PF00430 ATP synthase B/B' CF(0) 7 137 3.6E-22 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TREPR_3111 ca2d66f89e7b0760cdf0e008dc3a782f 282 SMART SM00974 14 99 4.1E-4 T 13-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding TREPR_3304 89982c7577b1fc345f85598dad536915 251 Pfam PF06541 Putative ABC-transporter type IV 14 165 1.5E-42 T 13-10-2018 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 TREPR_2403 1acfbc7cee581cc6992c55ecee7d49a3 907 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 32 222 6.6E-26 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TREPR_2403 1acfbc7cee581cc6992c55ecee7d49a3 907 Gene3D G3DSA:3.40.720.10 486 850 4.7E-13 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TREPR_2403 1acfbc7cee581cc6992c55ecee7d49a3 907 Pfam PF02096 60Kd inner membrane protein 33 222 1.3E-22 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TREPR_2403 1acfbc7cee581cc6992c55ecee7d49a3 907 SUPERFAMILY SSF53649 492 786 3.2E-8 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TREPR_0374 55566fc53ffec3a5dc16a8c111bffa48 200 SUPERFAMILY SSF109604 12 119 7.07E-11 T 13-10-2018 TREPR_1526 114720dfe6b94bcee14424c6ed56495d 376 SUPERFAMILY SSF53850 46 373 3.16E-35 T 13-10-2018 TREPR_1526 114720dfe6b94bcee14424c6ed56495d 376 Pfam PF13416 Bacterial extracellular solute-binding protein 63 335 1.2E-11 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_1526 114720dfe6b94bcee14424c6ed56495d 376 Gene3D G3DSA:3.40.190.10 153 280 1.6E-8 T 13-10-2018 TREPR_1526 114720dfe6b94bcee14424c6ed56495d 376 Gene3D G3DSA:3.40.190.10 281 345 1.4E-5 T 13-10-2018 TREPR_1526 114720dfe6b94bcee14424c6ed56495d 376 Gene3D G3DSA:3.40.190.10 3 152 2.8E-16 T 13-10-2018 TREPR_2062 86a088ee100c119019a26fd8ecb267b4 113 Gene3D G3DSA:1.10.443.10 3 82 1.2E-7 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TREPR_2062 86a088ee100c119019a26fd8ecb267b4 113 SUPERFAMILY SSF56349 9 79 1.82E-6 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TREPR_2693 a3d97121e6cb75d41cee054bc6e17fa6 239 Pfam PF13646 HEAT repeats 98 149 3.4E-8 T 13-10-2018 TREPR_2693 a3d97121e6cb75d41cee054bc6e17fa6 239 SUPERFAMILY SSF48371 100 185 7.2E-8 T 13-10-2018 IPR016024 Armadillo-type fold TREPR_2693 a3d97121e6cb75d41cee054bc6e17fa6 239 Gene3D G3DSA:1.25.10.110 93 155 6.6E-8 T 13-10-2018 TREPR_3087 f9eadb739eca0b36349313383ba8fc11 221 SUPERFAMILY SSF161098 13 209 1.44E-44 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_3087 f9eadb739eca0b36349313383ba8fc11 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 3.6E-19 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 TREPR_3087 f9eadb739eca0b36349313383ba8fc11 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 1.2E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_3087 f9eadb739eca0b36349313383ba8fc11 221 Gene3D G3DSA:1.10.3720.10 2 219 5.6E-54 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0815 b2d592dbb505224081c7b0a39d9d41be 91 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 25 83 3.7E-19 T 13-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system TREPR_0057 92c353c3a6c320b2ad37c7fb9f203452 223 SUPERFAMILY SSF51161 55 214 1.03E-41 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily TREPR_0057 92c353c3a6c320b2ad37c7fb9f203452 223 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TREPR_0057 92c353c3a6c320b2ad37c7fb9f203452 223 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 158 6.5E-10 T 13-10-2018 IPR001451 Hexapeptide repeat TREPR_0057 92c353c3a6c320b2ad37c7fb9f203452 223 Gene3D G3DSA:2.160.10.10 11 222 3.2E-66 T 13-10-2018 TREPR_2998 92185f8b5f019ca0c245b0e7fcf6c035 333 Gene3D G3DSA:3.20.20.210 1 330 1.1E-70 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_2998 92185f8b5f019ca0c245b0e7fcf6c035 333 SUPERFAMILY SSF51726 1 327 1.7E-46 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TREPR_2998 92185f8b5f019ca0c245b0e7fcf6c035 333 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 2 325 2.1E-53 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TREPR_0575 615d728de2a579870bc33601023adac1 235 Pfam PF12654 Domain of unknown function (DUF3786) 53 225 1.1E-36 T 13-10-2018 IPR024264 Domain of unknown function DUF3786 TREPR_3848 b6b92a8b3b02a0c3db6c9972e9267da1 303 Gene3D G3DSA:3.90.550.10 2 301 3.1E-97 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3848 b6b92a8b3b02a0c3db6c9972e9267da1 303 SUPERFAMILY SSF53448 7 290 7.21E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1333 0cc41b3e2790b3dfbd97fdbce3f5b89e 320 SUPERFAMILY SSF161098 90 296 1.96E-17 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1333 0cc41b3e2790b3dfbd97fdbce3f5b89e 320 Gene3D G3DSA:1.10.3720.10 83 317 2.1E-20 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1333 0cc41b3e2790b3dfbd97fdbce3f5b89e 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 313 3.6E-37 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2862 de599c84dc3b6df6e64a31514ccadec9 65 Pfam PF06289 Flagellar protein (FlbD) 1 58 5.6E-25 T 13-10-2018 IPR009384 Swarming motility protein SwrD-like TREPR_3449 212c6cf98c82c814c4891014b92e9dca 113 Pfam PF04327 Cysteine protease Prp 1 102 5.2E-18 T 13-10-2018 IPR007422 Cysteine protease Prp TREPR_3449 212c6cf98c82c814c4891014b92e9dca 113 SUPERFAMILY SSF118010 1 106 2.35E-18 T 13-10-2018 IPR036764 Cysteine protease Prp superfamily TREPR_3449 212c6cf98c82c814c4891014b92e9dca 113 Gene3D G3DSA:3.30.70.1490 2 109 3.4E-18 T 13-10-2018 IPR036764 Cysteine protease Prp superfamily TREPR_2323 be1a7dd2a1176a4aea1785bbe9b423e9 280 Pfam PF02591 C4-type zinc ribbon domain 200 232 4.4E-13 T 13-10-2018 IPR003743 C4-type zinc ribbon domain TREPR_3428 4efd287e19795b8d7608f7aa3a55c9b4 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 51 2.9E-5 T 13-10-2018 TREPR_1446 bdbe1dc8e158c25205b78f84e061867d 122 SUPERFAMILY SSF88723 1 112 7.01E-11 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_1446 bdbe1dc8e158c25205b78f84e061867d 122 Pfam PF01850 PIN domain 1 114 1.8E-10 T 13-10-2018 IPR002716 PIN domain TREPR_1446 bdbe1dc8e158c25205b78f84e061867d 122 Gene3D G3DSA:3.40.50.1010 1 122 1.8E-17 T 13-10-2018 TREPR_0066 c22924778061a653c72a628bddaa0d9e 232 Pfam PF04012 PspA/IM30 family 2 221 2.5E-52 T 13-10-2018 IPR007157 PspA/IM30 TREPR_1618 3d1b61a7af35a535a36e6709d0cee140 160 Pfam PF06695 Putative small multi-drug export protein 20 141 1.7E-35 T 13-10-2018 IPR009577 Putative small multi-drug export TREPR_0859 ee1b3709a7f1eeb4d410b8b7557d8bef 628 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 198 619 4.0E-67 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TREPR_0859 ee1b3709a7f1eeb4d410b8b7557d8bef 628 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 215 624 2.2E-93 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 TREPR_0859 ee1b3709a7f1eeb4d410b8b7557d8bef 628 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 146 2.7E-8 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ TREPR_0398 5e102873564cc9f97e54910cf580f86f 269 Gene3D G3DSA:2.60.120.10 22 120 3.7E-8 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_0398 5e102873564cc9f97e54910cf580f86f 269 Pfam PF04962 KduI/IolB family 25 256 2.7E-51 T 13-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 TREPR_0398 5e102873564cc9f97e54910cf580f86f 269 SUPERFAMILY SSF51182 28 235 1.28E-29 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily TREPR_0398 5e102873564cc9f97e54910cf580f86f 269 PIRSF PIRSF036628 14 263 1.3E-54 T 13-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 TREPR_0398 5e102873564cc9f97e54910cf580f86f 269 Gene3D G3DSA:2.60.120.10 121 262 2.0E-39 T 13-10-2018 IPR014710 RmlC-like jelly roll fold TREPR_3299 9da011a35a8140995b2dadc928abd8c2 344 Pfam PF12784 PD-(D/E)XK nuclease family transposase 33 262 8.2E-19 T 13-10-2018 TREPR_2317 6484133ff75873e455e26f8e84cedcc6 155 Pfam PF03692 Putative zinc- or iron-chelating domain 17 117 5.9E-11 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein TREPR_0837 5c5e1a563e8ac234c434d8c95aace70e 278 Gene3D G3DSA:3.40.630.70 149 278 7.9E-21 T 13-10-2018 TREPR_0837 5c5e1a563e8ac234c434d8c95aace70e 278 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 151 263 2.9E-14 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TREPR_0837 5c5e1a563e8ac234c434d8c95aace70e 278 SUPERFAMILY SSF55729 93 273 4.45E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase TREPR_2548 cd2b2d7a29ece9790a9f8cdbf981f242 434 Pfam PF02687 FtsX-like permease family 324 422 6.4E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TREPR_2123 64b2d0f33bebfb7461acc3673ccc1659 139 Gene3D G3DSA:1.20.120.330 1 136 1.6E-25 T 13-10-2018 TREPR_2123 64b2d0f33bebfb7461acc3673ccc1659 139 SUPERFAMILY SSF81593 29 133 7.85E-21 T 13-10-2018 TREPR_2123 64b2d0f33bebfb7461acc3673ccc1659 139 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 10 133 1.4E-20 T 13-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 TREPR_3675 7c6b28158bb68f433754ed3b7f0ba441 250 SUPERFAMILY SSF69318 102 187 6.54E-5 T 13-10-2018 TREPR_3852 0d5f93db16b89bc8f48979a48b6ca28b 57 SUPERFAMILY SSF54786 1 55 1.37E-9 T 13-10-2018 TREPR_3852 0d5f93db16b89bc8f48979a48b6ca28b 57 Gene3D G3DSA:3.30.920.30 1 56 6.4E-6 T 13-10-2018 IPR038570 HicA superfamily TREPR_3852 0d5f93db16b89bc8f48979a48b6ca28b 57 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 54 4.5E-7 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TREPR_1000 829daf242c40d3b12645121a66751238 214 SUPERFAMILY SSF55961 63 212 1.65E-6 T 13-10-2018 TREPR_1449 317eb2dde18e49573d2cf2f96937e10f 384 Pfam PF03239 Iron permease FTR1 family 34 240 2.0E-32 T 13-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 TREPR_3055 5aee82becc7cfd129ae71d6c2b5e179e 431 PRINTS PR00758 Arsenical pump membrane protein signature 369 394 7.8E-12 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 TREPR_3055 5aee82becc7cfd129ae71d6c2b5e179e 431 PRINTS PR00758 Arsenical pump membrane protein signature 282 306 7.8E-12 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 TREPR_3055 5aee82becc7cfd129ae71d6c2b5e179e 431 PRINTS PR00758 Arsenical pump membrane protein signature 327 349 7.8E-12 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 TREPR_3055 5aee82becc7cfd129ae71d6c2b5e179e 431 PRINTS PR00758 Arsenical pump membrane protein signature 100 124 7.8E-12 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 TREPR_3055 5aee82becc7cfd129ae71d6c2b5e179e 431 Pfam PF03600 Citrate transporter 15 373 2.7E-33 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 TREPR_3313 82cd3c3064a481dbafcf84cd82e9ec57 386 Gene3D G3DSA:3.10.310.10 177 371 6.4E-139 T 13-10-2018 TREPR_3313 82cd3c3064a481dbafcf84cd82e9ec57 386 SUPERFAMILY SSF54506 181 386 1.41E-61 T 13-10-2018 TREPR_3313 82cd3c3064a481dbafcf84cd82e9ec57 386 Gene3D G3DSA:3.10.310.10 15 385 6.4E-139 T 13-10-2018 TREPR_3313 82cd3c3064a481dbafcf84cd82e9ec57 386 Pfam PF04303 PrpF protein 15 385 1.5E-122 T 13-10-2018 IPR007400 PrpF protein TREPR_3313 82cd3c3064a481dbafcf84cd82e9ec57 386 SUPERFAMILY SSF54506 9 178 3.3E-63 T 13-10-2018 TREPR_2443 7cf08987f4f1c5de71b3ed1f2b92e80a 463 Pfam PF02447 GntP family permease 7 461 2.1E-88 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 TREPR_3756 350fc4f1e2ab7203d86143f2336715bd 307 Gene3D G3DSA:3.40.1790.10 3 307 2.2E-134 T 13-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 TREPR_3756 350fc4f1e2ab7203d86143f2336715bd 307 SUPERFAMILY SSF110581 6 303 4.58E-115 T 13-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 TREPR_3756 350fc4f1e2ab7203d86143f2336715bd 307 Pfam PF04227 Indigoidine synthase A like protein 13 301 9.8E-132 T 13-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 TREPR_3756 350fc4f1e2ab7203d86143f2336715bd 307 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 12 305 42.057 T 13-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 TREPR_3573 5cc324c8675978be27c08d3dafb11072 66 Gene3D G3DSA:3.40.109.10 1 63 1.2E-7 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_3573 5cc324c8675978be27c08d3dafb11072 66 SUPERFAMILY SSF55469 2 52 3.85E-6 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_2894 d13215b32e5f195ccb832f7acdcb880a 186 SUPERFAMILY SSF52980 5 184 9.65E-45 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_2894 d13215b32e5f195ccb832f7acdcb880a 186 Gene3D G3DSA:3.90.1570.10 3 186 1.1E-42 T 13-10-2018 TREPR_2894 d13215b32e5f195ccb832f7acdcb880a 186 Pfam PF05685 Putative restriction endonuclease 13 179 4.9E-39 T 13-10-2018 IPR008538 Domain of unknown function DUF820 TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 Gene3D G3DSA:2.160.20.20 639 997 6.8E-9 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SUPERFAMILY SSF51126 396 825 1.34E-10 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 564 596 1200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 810 831 2700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 886 911 3600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 679 711 2900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 863 884 70.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 623 653 590.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 783 804 3700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 600 622 8100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 837 857 2900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 751 777 680.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_3412 305ba3355dbdea72708ccbac62778567 1003 SMART SM00710 715 737 20.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_0101 5fc613e0a9f117d09e806dd5f1842ef4 859 SUPERFAMILY SSF49464 38 104 2.75E-7 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily TREPR_0101 5fc613e0a9f117d09e806dd5f1842ef4 859 Gene3D G3DSA:2.60.40.1120 39 119 3.7E-6 T 13-10-2018 TREPR_0510 674a9f995d5637b7e0a8de78e8751cb4 775 Gene3D G3DSA:3.20.70.20 137 278 3.3E-33 T 13-10-2018 TREPR_0510 674a9f995d5637b7e0a8de78e8751cb4 775 Gene3D G3DSA:3.20.70.20 291 748 1.8E-158 T 13-10-2018 TREPR_0510 674a9f995d5637b7e0a8de78e8751cb4 775 SUPERFAMILY SSF51998 126 745 1.59E-154 T 13-10-2018 TREPR_0510 674a9f995d5637b7e0a8de78e8751cb4 775 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 309 766 3.4E-146 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 TREPR_0510 674a9f995d5637b7e0a8de78e8751cb4 775 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 121 766 2.7E-213 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 TREPR_0510 674a9f995d5637b7e0a8de78e8751cb4 775 Pfam PF03477 ATP cone domain 4 92 6.4E-16 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TREPR_1970 68d129549a17cba53c00b9e38a515a52 233 Pfam PF02308 MgtC family 25 148 1.9E-35 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TREPR_1970 68d129549a17cba53c00b9e38a515a52 233 PRINTS PR01837 MgtC/SapB protein signature 46 64 1.0E-38 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TREPR_1970 68d129549a17cba53c00b9e38a515a52 233 PRINTS PR01837 MgtC/SapB protein signature 103 127 1.0E-38 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TREPR_1970 68d129549a17cba53c00b9e38a515a52 233 PRINTS PR01837 MgtC/SapB protein signature 27 46 1.0E-38 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TREPR_1970 68d129549a17cba53c00b9e38a515a52 233 PRINTS PR01837 MgtC/SapB protein signature 75 97 1.0E-38 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TREPR_0366 40fddc063aec24dbde01e7d6884b24aa 507 Gene3D G3DSA:3.10.560.10 219 303 2.5E-10 T 13-10-2018 TREPR_0366 40fddc063aec24dbde01e7d6884b24aa 507 Gene3D G3DSA:3.10.560.10 136 218 7.5E-8 T 13-10-2018 TREPR_0366 40fddc063aec24dbde01e7d6884b24aa 507 Pfam PF10531 SLBB domain 223 268 4.9E-5 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TREPR_2851 84e8dff49f9bf43e97357d7656ff5fa9 271 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 23 44 2.7E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TREPR_2851 84e8dff49f9bf43e97357d7656ff5fa9 271 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 185 207 2.7E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TREPR_2851 84e8dff49f9bf43e97357d7656ff5fa9 271 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 207 226 2.7E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TREPR_2851 84e8dff49f9bf43e97357d7656ff5fa9 271 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 83 102 2.7E-24 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TREPR_2851 84e8dff49f9bf43e97357d7656ff5fa9 271 Pfam PF01311 Bacterial export proteins, family 1 16 250 1.9E-52 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TREPR_2851 84e8dff49f9bf43e97357d7656ff5fa9 271 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 16 258 9.1E-56 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 TREPR_1443 7a86d181befe6048461ba72d35a98bff 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 284 2.7E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1443 7a86d181befe6048461ba72d35a98bff 293 SUPERFAMILY SSF161098 52 281 8.9E-51 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1443 7a86d181befe6048461ba72d35a98bff 293 Gene3D G3DSA:1.10.3720.10 48 291 1.2E-60 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1316 ea2f199db84382f0204d4ea96505cdf0 272 Gene3D G3DSA:3.20.20.150 1 271 2.5E-48 T 13-10-2018 TREPR_1316 ea2f199db84382f0204d4ea96505cdf0 272 Pfam PF01261 Xylose isomerase-like TIM barrel 29 228 4.9E-24 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain TREPR_1316 ea2f199db84382f0204d4ea96505cdf0 272 SUPERFAMILY SSF51658 19 271 2.49E-45 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily TREPR_3234 b2ca23c128959a74c39ea2e06e432616 93 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 54 3.6E-13 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TREPR_3234 b2ca23c128959a74c39ea2e06e432616 93 Pfam PF04221 RelB antitoxin 4 52 1.3E-9 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ TREPR_3193 0762f0d60394079a5a78996a9f80a2a4 236 Pfam PF05140 ResB-like family 81 184 7.7E-13 T 13-10-2018 IPR007816 ResB-like domain TREPR_0853 f5d43840665ee0ad9631d3cb3b4f4145 269 Pfam PF02535 ZIP Zinc transporter 118 264 8.1E-17 T 13-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 TREPR_0201 fcdb8570af3f3414096b4bb0a4cb7b35 391 Pfam PF14897 EpsG family 32 365 1.3E-42 T 13-10-2018 TREPR_1732 5a03df9c941cfa18b21c6a245a87e6d5 362 SUPERFAMILY SSF110997 290 360 1.83E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TREPR_1732 5a03df9c941cfa18b21c6a245a87e6d5 362 Pfam PF05036 Sporulation related domain 295 359 1.4E-5 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 TREPR_1732 5a03df9c941cfa18b21c6a245a87e6d5 362 Gene3D G3DSA:1.25.40.10 44 176 2.3E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1732 5a03df9c941cfa18b21c6a245a87e6d5 362 SUPERFAMILY SSF48452 67 130 4.27E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_1658 139e11522d94261d8ea4be6f752b1427 546 PRINTS PR00996 Glutamate methyltransferase family signature 76 88 3.0E-21 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_1658 139e11522d94261d8ea4be6f752b1427 546 PRINTS PR00996 Glutamate methyltransferase family signature 236 259 3.0E-21 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_1658 139e11522d94261d8ea4be6f752b1427 546 PRINTS PR00996 Glutamate methyltransferase family signature 217 231 3.0E-21 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_1658 139e11522d94261d8ea4be6f752b1427 546 PRINTS PR00996 Glutamate methyltransferase family signature 148 164 3.0E-21 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_1658 139e11522d94261d8ea4be6f752b1427 546 PRINTS PR00996 Glutamate methyltransferase family signature 113 133 3.0E-21 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_1658 139e11522d94261d8ea4be6f752b1427 546 SUPERFAMILY SSF53335 83 266 4.63E-39 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_1658 139e11522d94261d8ea4be6f752b1427 546 SMART SM00138 18 277 1.7E-33 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TREPR_1658 139e11522d94261d8ea4be6f752b1427 546 Gene3D G3DSA:3.40.50.150 82 279 1.0E-48 T 13-10-2018 TREPR_1658 139e11522d94261d8ea4be6f752b1427 546 Pfam PF01739 CheR methyltransferase, SAM binding domain 83 258 1.4E-40 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TREPR_0166 555f9f6258f35b0b891083af032317e4 114 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 110 3.4E-24 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TREPR_0166 555f9f6258f35b0b891083af032317e4 114 SUPERFAMILY SSF50118 2 112 7.19E-30 T 13-10-2018 TREPR_0166 555f9f6258f35b0b891083af032317e4 114 PIRSF PIRSF033490 1 112 9.2E-31 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TREPR_0166 555f9f6258f35b0b891083af032317e4 114 Gene3D G3DSA:2.30.30.110 1 112 7.1E-36 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TREPR_2245 b246a159dd55d7dc48e7ef1afc05f22a 168 Pfam PF05154 TM2 domain 2 51 3.7E-12 T 13-10-2018 IPR007829 TM2 domain TREPR_2645 d55c5ed04be69cf5ed49376288944049 95 Pfam PF04456 Protein of unknown function (DUF503) 3 89 9.4E-26 T 13-10-2018 IPR007546 Protein of unknown function DUF503 TREPR_2645 d55c5ed04be69cf5ed49376288944049 95 SUPERFAMILY SSF103007 1 90 1.44E-22 T 13-10-2018 IPR036746 TT1725-like superfamily TREPR_2645 d55c5ed04be69cf5ed49376288944049 95 Gene3D G3DSA:3.30.70.1120 1 95 1.2E-20 T 13-10-2018 IPR036746 TT1725-like superfamily TREPR_3175 0c85f68fcb2fdf2f094910cff3f997cc 677 Pfam PF12733 Cadherin-like beta sandwich domain 160 238 4.8E-10 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_3175 0c85f68fcb2fdf2f094910cff3f997cc 677 Pfam PF12733 Cadherin-like beta sandwich domain 475 551 5.2E-9 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_3232 f7df25ac4b6073db5f579b517602c919 144 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 36 141 2.7E-32 T 13-10-2018 IPR019287 Holliday junction resolvase-related domain TREPR_3762 53330a2868b8fc3a1bfb7379e7010c1d 183 Gene3D G3DSA:1.10.1760.20 1 175 1.1E-20 T 13-10-2018 TREPR_3762 53330a2868b8fc3a1bfb7379e7010c1d 183 Pfam PF07155 ECF-type riboflavin transporter, S component 6 171 2.9E-45 T 13-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 TREPR_3762 53330a2868b8fc3a1bfb7379e7010c1d 183 Hamap MF_01572 UPF0397 protein . 4 183 24.39 T 13-10-2018 IPR022914 Protein of unknown function UPF0397 TREPR_0019 4f37935268457c5eba3cd69ca9ec66c4 319 Pfam PF01040 UbiA prenyltransferase family 35 281 4.0E-24 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 TREPR_0019 4f37935268457c5eba3cd69ca9ec66c4 319 Gene3D G3DSA:1.10.357.140 22 146 6.6E-10 T 13-10-2018 TREPR_1638 b1a6a14e017f3ab1dac1ab1f84e98f67 5709 Pfam PF12245 Bacterial Ig-like domain (group 3) 4079 4092 3.9 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_1638 b1a6a14e017f3ab1dac1ab1f84e98f67 5709 Pfam PF12245 Bacterial Ig-like domain (group 3) 2705 2727 0.35 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_1638 b1a6a14e017f3ab1dac1ab1f84e98f67 5709 Pfam PF12245 Bacterial Ig-like domain (group 3) 2022 2043 0.15 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_1638 b1a6a14e017f3ab1dac1ab1f84e98f67 5709 Pfam PF12245 Bacterial Ig-like domain (group 3) 767 793 1.7 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2291 75ea978a2827e711cd2fd9eb98d5fbfb 569 SUPERFAMILY SSF54001 409 444 1.84E-5 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TREPR_2291 75ea978a2827e711cd2fd9eb98d5fbfb 569 Gene3D G3DSA:3.10.620.30 385 463 1.9E-5 T 13-10-2018 TREPR_0314 a042aca3778eff8d69733f45417016a5 265 Pfam PF02673 Bacitracin resistance protein BacA 6 253 8.2E-71 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TREPR_0314 a042aca3778eff8d69733f45417016a5 265 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 258 16.418 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TREPR_3378 1cf1af36ed36d5a6a640c2b55cb2dafa 400 Gene3D G3DSA:3.30.1330.60 266 400 2.4E-32 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_3378 1cf1af36ed36d5a6a640c2b55cb2dafa 400 SUPERFAMILY SSF103088 290 398 3.27E-28 T 13-10-2018 IPR036737 OmpA-like domain superfamily TREPR_3378 1cf1af36ed36d5a6a640c2b55cb2dafa 400 Pfam PF00691 OmpA family 298 392 2.7E-14 T 13-10-2018 IPR006665 OmpA-like domain TREPR_2633 0f8bd8091db49432dc4569528622fd6c 1533 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1216 1448 3.6E-12 T 13-10-2018 IPR007452 Translocation and assembly module TamB TREPR_0996 562f3737c89d0daa23a439c85ce3f2dd 221 Pfam PF09992 Phosphodiester glycosidase 33 217 5.8E-28 T 13-10-2018 IPR018711 Phosphodiester glycosidase TREPR_2522 164445330420de73a80ae994836c0163 589 Pfam PF13753 Putative flagellar system-associated repeat 147 222 1.6E-4 T 13-10-2018 IPR028059 Putative flagellar system-associated repeat TREPR_0939 1c8e8db3b09da5e58fe98bdd01af64a6 374 Pfam PF01321 Creatinase/Prolidase N-terminal domain 9 147 4.1E-11 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 TREPR_0939 1c8e8db3b09da5e58fe98bdd01af64a6 374 Gene3D G3DSA:3.90.230.10 146 366 1.1E-46 T 13-10-2018 TREPR_0939 1c8e8db3b09da5e58fe98bdd01af64a6 374 SUPERFAMILY SSF53092 8 145 2.27E-18 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_0939 1c8e8db3b09da5e58fe98bdd01af64a6 374 SUPERFAMILY SSF55920 147 362 1.31E-46 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like TREPR_0939 1c8e8db3b09da5e58fe98bdd01af64a6 374 Gene3D G3DSA:3.40.350.10 6 145 1.3E-25 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TREPR_0939 1c8e8db3b09da5e58fe98bdd01af64a6 374 Pfam PF00557 Metallopeptidase family M24 155 353 2.8E-29 T 13-10-2018 IPR000994 Peptidase M24 TREPR_0009 367db24cadb63282508fd22b2f195bd6 321 SUPERFAMILY SSF53448 10 237 7.31E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0009 367db24cadb63282508fd22b2f195bd6 321 Pfam PF00535 Glycosyl transferase family 2 14 131 1.2E-10 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TREPR_0009 367db24cadb63282508fd22b2f195bd6 321 Gene3D G3DSA:3.90.550.10 10 248 3.8E-22 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1499 02c190284e286b018c0eadc5efaf4bb0 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site TREPR_1499 02c190284e286b018c0eadc5efaf4bb0 127 Pfam PF00411 Ribosomal protein S11 17 126 1.7E-43 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TREPR_1499 02c190284e286b018c0eadc5efaf4bb0 127 PIRSF PIRSF002131 1 127 7.2E-54 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TREPR_1499 02c190284e286b018c0eadc5efaf4bb0 127 SUPERFAMILY SSF53137 13 127 1.42E-45 T 13-10-2018 TREPR_1499 02c190284e286b018c0eadc5efaf4bb0 127 Gene3D G3DSA:3.30.420.80 2 127 3.7E-50 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 TREPR_1499 02c190284e286b018c0eadc5efaf4bb0 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 123 2.5E-55 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TREPR_1499 02c190284e286b018c0eadc5efaf4bb0 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 127 31.697 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TREPR_0487 fd15dced31c753ecd17bfd3131553492 274 Gene3D G3DSA:3.90.930.1 38 177 2.7E-7 T 13-10-2018 TREPR_3665 940ffd4a11cdf6f79e0807d6b425f131 501 Pfam PF08757 CotH kinase protein 159 494 1.5E-41 T 13-10-2018 IPR014867 Spore coat protein CotH TREPR_3103 b4d3355b16235b49830f718fda4c4737 87 Pfam PF03683 Uncharacterised protein family (UPF0175) 10 81 1.6E-18 T 13-10-2018 IPR005368 Uncharacterised protein family UPF0175 TREPR_1032 aa0aedf886c57dfb558cc812067ef989 889 Pfam PF07715 TonB-dependent Receptor Plug Domain 143 219 1.4E-4 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain TREPR_1032 aa0aedf886c57dfb558cc812067ef989 889 SUPERFAMILY SSF56935 129 889 1.28E-36 T 13-10-2018 TREPR_0602 ca914a02701ab23c3caa6d77a4b2832f 242 Gene3D G3DSA:3.10.350.10 163 220 3.5E-7 T 13-10-2018 IPR036779 LysM domain superfamily TREPR_0403 dd3d3cffcf9d970225dbe159ef1bee07 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 320 2.0E-43 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_3018 3f425fc3ce8a2322ccfb48055abea328 462 PIRSF PIRSF006603 4 459 5.2E-110 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3018 3f425fc3ce8a2322ccfb48055abea328 462 Pfam PF01554 MatE 27 187 3.6E-33 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3018 3f425fc3ce8a2322ccfb48055abea328 462 Pfam PF01554 MatE 249 411 1.1E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3018 3f425fc3ce8a2322ccfb48055abea328 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 423 2.3E-68 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_1572 48e37d9654650afc693819c5f1587376 281 Gene3D G3DSA:3.30.1380.10 87 270 7.7E-53 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TREPR_1572 48e37d9654650afc693819c5f1587376 281 SUPERFAMILY SSF55166 123 258 8.11E-30 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TREPR_1572 48e37d9654650afc693819c5f1587376 281 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 131 252 1.1E-35 T 13-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 TREPR_0339 e808af6d0fbc9f219357badfdf0e2507 355 SUPERFAMILY SSF53756 15 353 4.93E-21 T 13-10-2018 TREPR_0339 e808af6d0fbc9f219357badfdf0e2507 355 Gene3D G3DSA:3.40.50.2000 194 355 6.5E-8 T 13-10-2018 TREPR_0647 93f5326d11728a54943537155c0e72bb 187 Pfam PF02169 LPP20 lipoprotein 37 139 3.4E-8 T 13-10-2018 IPR024952 Lipoprotein LPP20-like TREPR_2512 11ec5b3e3279f61c1ae84545d4ea9b06 153 Gene3D G3DSA:3.30.1330.40 2 153 6.7E-46 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TREPR_2512 11ec5b3e3279f61c1ae84545d4ea9b06 153 SUPERFAMILY SSF55298 2 151 1.57E-41 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TREPR_2512 11ec5b3e3279f61c1ae84545d4ea9b06 153 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 143 1.2E-13 T 13-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like TREPR_0257 17f71eaa5270f7d16ee8e7483b668f6a 90 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 24 87 6.9E-14 T 13-10-2018 IPR010035 ThiS, thiamine-biosynthesis TREPR_0257 17f71eaa5270f7d16ee8e7483b668f6a 90 Gene3D G3DSA:3.10.20.30 21 89 2.3E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily TREPR_0257 17f71eaa5270f7d16ee8e7483b668f6a 90 SUPERFAMILY SSF54285 22 87 9.3E-12 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp TREPR_0257 17f71eaa5270f7d16ee8e7483b668f6a 90 Pfam PF02597 ThiS family 24 87 3.2E-8 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 TREPR_2250 1fca7bd6175fe1a97e686e290af7c0ff 183 Gene3D G3DSA:2.30.110.10 24 183 3.2E-20 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TREPR_2250 1fca7bd6175fe1a97e686e290af7c0ff 183 SUPERFAMILY SSF50475 28 179 2.83E-14 T 13-10-2018 TREPR_1648 78cc4061586a961413fb36c7023dfd49 166 Pfam PF06005 Cell division protein ZapB 3 72 9.2E-9 T 13-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 TREPR_3684 0566a617450f35c5ebefb258d2d3e38d 69 Pfam PF12441 CopG antitoxin of type II toxin-antitoxin system 4 56 1.3E-8 T 13-10-2018 IPR022148 CopG antitoxin TREPR_3371 09df37ccd3c21417cebe02eae37038c8 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 130 4.2E-14 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TREPR_1253 5cb0ecb965a40f15e59c133a981c0cdc 379 Gene3D G3DSA:3.40.50.2300 151 370 3.2E-108 T 13-10-2018 TREPR_1253 5cb0ecb965a40f15e59c133a981c0cdc 379 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 80 329 1.4E-41 T 13-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 TREPR_1253 5cb0ecb965a40f15e59c133a981c0cdc 379 Gene3D G3DSA:3.40.50.2300 43 306 3.2E-108 T 13-10-2018 TREPR_1564 15c66a19a51f7f0569fac558822f98b9 457 Pfam PF13520 Amino acid permease 7 416 1.5E-30 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TREPR_1564 15c66a19a51f7f0569fac558822f98b9 457 PIRSF PIRSF006060 1 454 1.8E-43 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 TREPR_1564 15c66a19a51f7f0569fac558822f98b9 457 Gene3D G3DSA:1.20.1740.10 2 453 4.6E-53 T 13-10-2018 TREPR_0442 1b534927accb8d2df78e1c75ae0ac49e 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 297 5.8E-27 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_2946 acb966a20dd273fd4a7d629e57af33bb 582 SUPERFAMILY SSF52091 475 579 6.08E-17 T 13-10-2018 IPR036513 STAS domain superfamily TREPR_2946 acb966a20dd273fd4a7d629e57af33bb 582 Pfam PF01740 STAS domain 475 575 4.4E-16 T 13-10-2018 IPR002645 STAS domain TREPR_2946 acb966a20dd273fd4a7d629e57af33bb 582 Pfam PF00916 Sulfate permease family 45 407 2.3E-81 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TREPR_2946 acb966a20dd273fd4a7d629e57af33bb 582 Gene3D G3DSA:3.30.750.24 464 582 1.7E-28 T 13-10-2018 IPR036513 STAS domain superfamily TREPR_1202 e1bcd3736498abb82b6970f5b1d88d7f 475 Gene3D G3DSA:3.40.50.620 15 242 2.8E-58 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TREPR_1202 e1bcd3736498abb82b6970f5b1d88d7f 475 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 213 6.5E-43 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TREPR_1202 e1bcd3736498abb82b6970f5b1d88d7f 475 SUPERFAMILY SSF52402 21 236 7.59E-48 T 13-10-2018 TREPR_1202 e1bcd3736498abb82b6970f5b1d88d7f 475 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 305 21.52 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TREPR_1202 e1bcd3736498abb82b6970f5b1d88d7f 475 Pfam PF01171 PP-loop family 21 208 7.0E-43 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TREPR_3372 edda6a5f486ecf2603b1b8c757497027 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 132 4.1E-19 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TREPR_0546 499aa603e3b37ddfbbe4ce72f7033ea6 282 Pfam PF02654 Cobalamin-5-phosphate synthase 10 271 9.0E-40 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TREPR_0546 499aa603e3b37ddfbbe4ce72f7033ea6 282 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 282 28.333 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TREPR_0349 6a39d1229b0584c787258d05f5c1af81 349 Gene3D G3DSA:3.30.470.20 228 324 2.2E-5 T 13-10-2018 TREPR_0349 6a39d1229b0584c787258d05f5c1af81 349 SUPERFAMILY SSF56059 90 312 6.34E-19 T 13-10-2018 TREPR_2744 017d4199854e77c968d84894d41e1fd8 486 PIRSF PIRSF006603 13 485 1.5E-69 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2744 017d4199854e77c968d84894d41e1fd8 486 Pfam PF01554 MatE 38 201 2.0E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2744 017d4199854e77c968d84894d41e1fd8 486 Pfam PF01554 MatE 297 439 2.5E-18 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_2744 017d4199854e77c968d84894d41e1fd8 486 TIGRFAM TIGR00797 matE: MATE efflux family protein 38 449 6.5E-45 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 TREPR_3889 1905c69916a7c890cc35b2367b3eac79 354 Pfam PF01757 Acyltransferase family 27 340 5.9E-19 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 TREPR_1293 bbe73c0df2fb1c969200f14d49b09d58 234 Pfam PF12784 PD-(D/E)XK nuclease family transposase 33 170 1.5E-9 T 13-10-2018 TREPR_1828 e0018e631917e4d6624a31732a38d471 342 Pfam PF13280 WYL domain 151 337 4.8E-32 T 13-10-2018 IPR026881 WYL domain TREPR_1213 9b92a997cf65b6bb9d1ad510e557457e 188 Pfam PF12801 4Fe-4S binding domain 56 96 0.0012 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_1213 9b92a997cf65b6bb9d1ad510e557457e 188 Pfam PF12801 4Fe-4S binding domain 148 185 0.0012 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TREPR_2368 19f20966c69c2b972149779e0c14ada9 355 Gene3D G3DSA:3.90.25.10 200 348 1.6E-89 T 13-10-2018 TREPR_2368 19f20966c69c2b972149779e0c14ada9 355 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 254 1.0E-48 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TREPR_2368 19f20966c69c2b972149779e0c14ada9 355 Gene3D G3DSA:3.40.50.720 4 336 1.6E-89 T 13-10-2018 TREPR_2368 19f20966c69c2b972149779e0c14ada9 355 SUPERFAMILY SSF51735 3 353 4.38E-79 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily TREPR_2368 19f20966c69c2b972149779e0c14ada9 355 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.1E-21 T 13-10-2018 TREPR_2368 19f20966c69c2b972149779e0c14ada9 355 PRINTS PR01713 Nucleotide sugar epimerase signature 236 251 1.1E-21 T 13-10-2018 TREPR_2368 19f20966c69c2b972149779e0c14ada9 355 PRINTS PR01713 Nucleotide sugar epimerase signature 315 332 1.1E-21 T 13-10-2018 TREPR_2368 19f20966c69c2b972149779e0c14ada9 355 PRINTS PR01713 Nucleotide sugar epimerase signature 276 291 1.1E-21 T 13-10-2018 TREPR_2114 8e1a9af73997f3021d19d0d7db90ff00 984 Pfam PF07581 The GLUG motif 692 717 0.002 T 13-10-2018 IPR011493 GLUG TREPR_2114 8e1a9af73997f3021d19d0d7db90ff00 984 Gene3D G3DSA:2.160.20.110 618 796 2.0E-41 T 13-10-2018 TREPR_2815 7ebdfcb12e5827630eacd4752b8a6d0a 61 Pfam PF14070 Putative motility protein 3 59 2.5E-11 T 13-10-2018 IPR025906 Putative motility protein TREPR_2499 69355e744d573fab4adaa469f60a2702 303 Pfam PF01875 Memo-like protein 37 261 1.0E-22 T 13-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 TREPR_2499 69355e744d573fab4adaa469f60a2702 303 Gene3D G3DSA:3.40.830.10 2 263 4.1E-24 T 13-10-2018 TREPR_2499 69355e744d573fab4adaa469f60a2702 303 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 4 261 9.7E-49 T 13-10-2018 TREPR_3076 78560fb51a1a0a805884cb9950643f60 392 Gene3D G3DSA:1.10.4160.10 1 391 7.2E-12 T 13-10-2018 IPR038271 Purine-cytosine permease superfamily TREPR_2767 4cab520b9703825ff22cc7d690ad7235 292 Pfam PF02811 PHP domain 6 90 1.7E-8 T 13-10-2018 IPR004013 PHP domain GO:0003824 TREPR_2767 4cab520b9703825ff22cc7d690ad7235 292 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 7 257 3.5E-36 T 13-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 TREPR_2767 4cab520b9703825ff22cc7d690ad7235 292 SUPERFAMILY SSF89550 6 275 2.35E-34 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TREPR_2767 4cab520b9703825ff22cc7d690ad7235 292 Gene3D G3DSA:3.20.20.140 5 280 1.8E-62 T 13-10-2018 TREPR_2838 082fd209ae6c6d96ee24349398ec21bc 145 SUPERFAMILY SSF55811 1 130 3.66E-26 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TREPR_2838 082fd209ae6c6d96ee24349398ec21bc 145 Gene3D G3DSA:3.90.79.10 1 134 8.2E-31 T 13-10-2018 TREPR_2838 082fd209ae6c6d96ee24349398ec21bc 145 Pfam PF00293 NUDIX domain 6 127 1.7E-12 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TREPR_0411 2f63dca827497c78e30d41658ac1fcce 1232 Pfam PF07669 Eco57I restriction-modification methylase 653 747 8.8E-6 T 13-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 TREPR_0411 2f63dca827497c78e30d41658ac1fcce 1232 SUPERFAMILY SSF53335 233 764 1.77E-51 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0411 2f63dca827497c78e30d41658ac1fcce 1232 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 656 662 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TREPR_0411 2f63dca827497c78e30d41658ac1fcce 1232 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 387 403 1.1E-8 T 13-10-2018 TREPR_0411 2f63dca827497c78e30d41658ac1fcce 1232 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 453 467 1.1E-8 T 13-10-2018 TREPR_0411 2f63dca827497c78e30d41658ac1fcce 1232 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 653 665 1.1E-8 T 13-10-2018 TREPR_2678 2c8f0de8d373d00bf43e649e88974f66 98 Pfam PF10719 Late competence development protein ComFB 14 95 3.1E-18 T 13-10-2018 IPR019657 Late competence development protein ComFB TREPR_3702 705252ab49ba927757328d03c6421bb9 308 Pfam PF12146 Serine aminopeptidase, S33 56 190 8.2E-9 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 TREPR_3702 705252ab49ba927757328d03c6421bb9 308 Gene3D G3DSA:3.40.50.1820 48 307 1.4E-13 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_3702 705252ab49ba927757328d03c6421bb9 308 SUPERFAMILY SSF53474 40 260 3.28E-12 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1208 60ac43ade12eff7352615e1a978c0d85 93 SUPERFAMILY SSF160537 1 81 2.09E-31 T 13-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 TREPR_1208 60ac43ade12eff7352615e1a978c0d85 93 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 93 26.539 T 13-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 TREPR_1208 60ac43ade12eff7352615e1a978c0d85 93 Pfam PF04026 SpoVG 1 81 1.5E-36 T 13-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 TREPR_1208 60ac43ade12eff7352615e1a978c0d85 93 Gene3D G3DSA:3.30.1120.40 1 92 2.3E-36 T 13-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 TREPR_0428 7b919a68c9bce7a03d42d913e942d50c 262 Gene3D G3DSA:1.10.3720.10 64 261 1.9E-14 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0428 7b919a68c9bce7a03d42d913e942d50c 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 256 2.6E-9 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_0428 7b919a68c9bce7a03d42d913e942d50c 262 SUPERFAMILY SSF161098 64 251 1.96E-17 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_0191 81267f2b5a8d9ca27469602ad9a06d87 284 Gene3D G3DSA:3.40.50.150 24 198 1.2E-10 T 13-10-2018 TREPR_0191 81267f2b5a8d9ca27469602ad9a06d87 284 Pfam PF08241 Methyltransferase domain 38 118 2.4E-8 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TREPR_0191 81267f2b5a8d9ca27469602ad9a06d87 284 SUPERFAMILY SSF53335 38 225 6.51E-9 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TREPR_0458 780441c5243fe47d47ce2eeedd81d7cc 125 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 31 112 1.1E-10 T 13-10-2018 IPR009241 Toxin HigB-like TREPR_3829 d119199112e9af23daf4599525590f57 379 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 260 7.5E-16 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_3829 d119199112e9af23daf4599525590f57 379 SUPERFAMILY SSF52540 1 295 3.94E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TREPR_3829 d119199112e9af23daf4599525590f57 379 Gene3D G3DSA:3.40.50.300 1 298 3.3E-38 T 13-10-2018 TREPR_2503 a7689d48568c03ae0eaaed43041d3e98 244 Pfam PF12679 ABC-2 family transporter protein 49 184 2.7E-10 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 TREPR_2657 cba9b0153724b8c22a21395b724b4d98 200 Pfam PF10962 Protein of unknown function (DUF2764) 128 187 4.0E-5 T 13-10-2018 IPR024492 Protein of unknown function DUF2764 TREPR_2160 ba8deaf5857a9df8868103784b28e021 92 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 52 2.3E-10 T 13-10-2018 TREPR_2160 ba8deaf5857a9df8868103784b28e021 92 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 7 68 2.7E-15 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TREPR_2160 ba8deaf5857a9df8868103784b28e021 92 Gene3D G3DSA:3.40.1620.10 3 45 1.4E-8 T 13-10-2018 TREPR_2160 ba8deaf5857a9df8868103784b28e021 92 SUPERFAMILY SSF143120 7 79 3.23E-16 T 13-10-2018 IPR036165 YefM-like superfamily TREPR_2807 9aced4bacdf2cd6bdb5b2fbbf0b61f81 204 SUPERFAMILY SSF53271 3 183 2.13E-20 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like TREPR_2807 9aced4bacdf2cd6bdb5b2fbbf0b61f81 204 Pfam PF00156 Phosphoribosyl transferase domain 14 120 5.6E-9 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TREPR_2807 9aced4bacdf2cd6bdb5b2fbbf0b61f81 204 Gene3D G3DSA:3.40.50.2020 2 179 1.9E-25 T 13-10-2018 TREPR_3223 20ad5d2e5b2a0d92d4585925ba0a84af 893 Gene3D G3DSA:3.40.50.1820 219 456 2.3E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_3223 20ad5d2e5b2a0d92d4585925ba0a84af 893 Gene3D G3DSA:3.40.50.1820 616 890 2.4E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_3223 20ad5d2e5b2a0d92d4585925ba0a84af 893 SUPERFAMILY SSF53474 628 838 3.85E-17 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_3223 20ad5d2e5b2a0d92d4585925ba0a84af 893 Pfam PF00326 Prolyl oligopeptidase family 309 368 2.3E-6 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TREPR_3223 20ad5d2e5b2a0d92d4585925ba0a84af 893 SUPERFAMILY SSF53474 231 421 1.61E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_0239 eea0db1d25c1f3cb37592c3a9f4c1296 515 Pfam PF07556 Protein of unknown function (DUF1538) 19 224 1.8E-64 T 13-10-2018 IPR011435 Protein of unknown function DUF1538 TREPR_0239 eea0db1d25c1f3cb37592c3a9f4c1296 515 Pfam PF07556 Protein of unknown function (DUF1538) 268 476 1.4E-68 T 13-10-2018 IPR011435 Protein of unknown function DUF1538 TREPR_0266 2a3218694152de9cc05d591573219c74 313 Gene3D G3DSA:3.40.50.2300 138 309 1.7E-87 T 13-10-2018 TREPR_0266 2a3218694152de9cc05d591573219c74 313 Pfam PF13407 Periplasmic binding protein domain 38 292 9.3E-57 T 13-10-2018 IPR025997 Periplasmic binding protein TREPR_0266 2a3218694152de9cc05d591573219c74 313 Gene3D G3DSA:3.40.50.2300 43 301 1.7E-87 T 13-10-2018 TREPR_0266 2a3218694152de9cc05d591573219c74 313 SUPERFAMILY SSF53822 35 311 4.38E-71 T 13-10-2018 IPR028082 Periplasmic binding protein-like I TREPR_1089 c0e9b81823a1596dfc218229f6f748a0 240 Pfam PF04620 Flagellar filament outer layer protein Flaa 27 226 2.3E-47 T 13-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 TREPR_1297 c0bbbc030e69d09c9de6ce629bbf80ad 619 Pfam PF12733 Cadherin-like beta sandwich domain 139 224 7.2E-6 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_1297 c0bbbc030e69d09c9de6ce629bbf80ad 619 Pfam PF12733 Cadherin-like beta sandwich domain 327 415 1.6E-10 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_1297 c0bbbc030e69d09c9de6ce629bbf80ad 619 Pfam PF12733 Cadherin-like beta sandwich domain 58 132 2.8E-6 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_1297 c0bbbc030e69d09c9de6ce629bbf80ad 619 Pfam PF12733 Cadherin-like beta sandwich domain 233 317 6.2E-11 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_0693 9b828477c133acecee7916209fde0174 235 Pfam PF10719 Late competence development protein ComFB 4 91 2.4E-20 T 13-10-2018 IPR019657 Late competence development protein ComFB TREPR_0300 1b2b8c7b3f12526ba11ae28228f2438c 156 Pfam PF08239 Bacterial SH3 domain 45 86 1.9E-6 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type TREPR_0300 1b2b8c7b3f12526ba11ae28228f2438c 156 SMART SM00287 25 90 5.4E-5 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type TREPR_0300 1b2b8c7b3f12526ba11ae28228f2438c 156 Gene3D G3DSA:2.30.30.40 18 90 5.5E-10 T 13-10-2018 TREPR_1549 5171120231dfa0088b314a5be0d586aa 523 Gene3D G3DSA:1.10.10.2840 388 520 1.2E-13 T 13-10-2018 TREPR_1549 5171120231dfa0088b314a5be0d586aa 523 Pfam PF13556 PucR C-terminal helix-turn-helix domain 457 514 8.1E-16 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain TREPR_3621 0d1696a095ecf4eebd0db445d0db2a9e 70 Pfam PF00872 Transposase, Mutator family 1 46 7.4E-5 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TREPR_0851 7a62dc539c62a8a071f8c6465d8b3fa9 551 SMART SM00854 240 498 5.5E-59 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA TREPR_0851 7a62dc539c62a8a071f8c6465d8b3fa9 551 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 241 496 2.9E-56 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA TREPR_0851 7a62dc539c62a8a071f8c6465d8b3fa9 551 SUPERFAMILY SSF56300 254 497 1.04E-27 T 13-10-2018 TREPR_2537 83cbe1a6cd3f08a73001bb35382e7d82 258 Pfam PF01061 ABC-2 type transporter 17 219 2.2E-25 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TREPR_2537 83cbe1a6cd3f08a73001bb35382e7d82 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 2.0E-8 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TREPR_2537 83cbe1a6cd3f08a73001bb35382e7d82 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 33 54 2.0E-8 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TREPR_2537 83cbe1a6cd3f08a73001bb35382e7d82 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 2.0E-8 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TREPR_2537 83cbe1a6cd3f08a73001bb35382e7d82 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 2.0E-8 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TREPR_0747 b88dd43d80e37a375f08e3fda960bd1f 1322 Pfam PF04286 Protein of unknown function (DUF445) 669 1030 6.3E-13 T 13-10-2018 IPR007383 Protein of unknown function DUF445 TREPR_0747 b88dd43d80e37a375f08e3fda960bd1f 1322 Pfam PF04286 Protein of unknown function (DUF445) 15 339 7.2E-17 T 13-10-2018 IPR007383 Protein of unknown function DUF445 TREPR_0944 4e380856114fa31916a914866b12989f 110 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 28 69 4.4E-7 T 13-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 TREPR_0944 4e380856114fa31916a914866b12989f 110 SUPERFAMILY SSF47413 16 69 9.38E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TREPR_0944 4e380856114fa31916a914866b12989f 110 Gene3D G3DSA:1.10.260.40 10 109 7.4E-9 T 13-10-2018 TREPR_1608 5697abb753adeb9bdc33097099e45fac 282 Gene3D G3DSA:1.10.3720.10 8 269 8.8E-66 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1608 5697abb753adeb9bdc33097099e45fac 282 SUPERFAMILY SSF161098 10 282 4.86E-74 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1608 5697abb753adeb9bdc33097099e45fac 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 274 9.3E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_2458 0f259dc32b194f18f8911c4e174e654a 340 Pfam PF04620 Flagellar filament outer layer protein Flaa 44 283 1.6E-70 T 13-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 TREPR_2492 0ed66edf978b314e3fdbe5d532a0d2aa 151 Pfam PF04977 Septum formation initiator 15 90 3.4E-10 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC TREPR_0438 5d208be18c273607e7c2c67aea50b292 98 SUPERFAMILY SSF47598 21 67 1.67E-5 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TREPR_0488 7fda46e873a6b810314f027e808b2189 405 SUPERFAMILY SSF48431 25 160 1.7E-5 T 13-10-2018 IPR011030 Lipovitellin-phosvitin complex, superhelical domain Reactome: R-HSA-8866423|Reactome: R-HSA-8963888 TREPR_3581 49e177607abc4f565c3c6c71e05ddf45 382 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 354 7.1E-22 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_1311 4fb0ea753d39951e5cad300c241718f3 278 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 17 268 2.1E-41 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TREPR_1311 4fb0ea753d39951e5cad300c241718f3 278 Gene3D G3DSA:3.40.50.970 3 277 7.6E-92 T 13-10-2018 TREPR_1311 4fb0ea753d39951e5cad300c241718f3 278 SUPERFAMILY SSF52518 3 272 2.65E-78 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold TREPR_0600 838a886fdd10204e265dc2ccb587f246 389 ProDom PD416840 MEMBRANE A ANTIGEN TREPONEMAL TMPA PRECURSOR PALMITATE SIGNAL LIPOPROTEIN PROTEIN 153 349 1.0E-8 T 13-10-2018 TREPR_1850 ab70ecc4c30b5497946cc46aa63e0bad 288 Pfam PF13672 Protein phosphatase 2C 12 244 5.4E-35 T 13-10-2018 TREPR_1850 ab70ecc4c30b5497946cc46aa63e0bad 288 SUPERFAMILY SSF81606 9 280 4.71E-8 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TREPR_2001 3794fe4263d4de961e14a36863199c64 421 SUPERFAMILY SSF52777 27 135 7.89E-5 T 13-10-2018 TREPR_3192 1da491767eae5bab2a6a6906ee844c23 261 Pfam PF01578 Cytochrome C assembly protein 62 258 6.2E-39 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 TREPR_0897 2927edfdaca767761cd547aa986cac95 307 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 7 293 4.1E-55 T 13-10-2018 IPR017686 Phage/plasmid-like protein TREPR_0897 2927edfdaca767761cd547aa986cac95 307 Pfam PF06067 Domain of unknown function (DUF932) 66 282 1.8E-44 T 13-10-2018 IPR026325 Protein of unknown function DUF932 TREPR_1215 483d1aa7defda06a6f3cca764d5353a1 216 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 9 209 4.4E-37 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1215 483d1aa7defda06a6f3cca764d5353a1 216 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 9 213 18.732 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_1215 483d1aa7defda06a6f3cca764d5353a1 216 Pfam PF01813 ATP synthase subunit D 18 208 7.4E-40 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 TREPR_2603 cca09a27c01683baa9b835b0b571f02d 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 2 149 1.1E-51 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TREPR_2603 cca09a27c01683baa9b835b0b571f02d 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 155 72.754 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TREPR_2603 cca09a27c01683baa9b835b0b571f02d 155 Pfam PF03477 ATP cone domain 50 138 1.5E-16 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TREPR_1813 534f52bd1e2b05356b918df6cb5a5eae 516 SUPERFAMILY SSF56436 293 511 6.12E-60 T 13-10-2018 IPR016187 C-type lectin fold TREPR_1813 534f52bd1e2b05356b918df6cb5a5eae 516 Pfam PF03781 Sulfatase-modifying factor enzyme 1 295 509 1.1E-39 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TREPR_1813 534f52bd1e2b05356b918df6cb5a5eae 516 Gene3D G3DSA:3.90.1580.10 282 511 4.5E-60 T 13-10-2018 TREPR_3879 6718d5907b42849b78b27926c5b452b5 57 SUPERFAMILY SSF54786 1 56 5.89E-9 T 13-10-2018 TREPR_3879 6718d5907b42849b78b27926c5b452b5 57 Gene3D G3DSA:3.30.920.30 1 56 3.8E-5 T 13-10-2018 IPR038570 HicA superfamily TREPR_3879 6718d5907b42849b78b27926c5b452b5 57 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 6 55 2.6E-6 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 TREPR_0288 2b08c554d17a8886e3322c4423130bb0 165 Pfam PF04073 Aminoacyl-tRNA editing domain 24 141 1.6E-24 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TREPR_0288 2b08c554d17a8886e3322c4423130bb0 165 Gene3D G3DSA:3.90.960.10 1 159 2.9E-38 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TREPR_0288 2b08c554d17a8886e3322c4423130bb0 165 SUPERFAMILY SSF55826 4 142 4.84E-34 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TREPR_0839 46e1fcacf4bb0075a09e7b302f39a2ea 209 Gene3D G3DSA:3.40.50.1000 10 184 3.5E-36 T 13-10-2018 IPR023214 HAD superfamily TREPR_0839 46e1fcacf4bb0075a09e7b302f39a2ea 209 Gene3D G3DSA:1.10.40.40 19 72 3.5E-36 T 13-10-2018 TREPR_0839 46e1fcacf4bb0075a09e7b302f39a2ea 209 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 7 190 2.5E-49 T 13-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 TREPR_0839 46e1fcacf4bb0075a09e7b302f39a2ea 209 SUPERFAMILY SSF56784 8 188 1.13E-34 T 13-10-2018 IPR036412 HAD-like superfamily TREPR_0822 e407b5d17b0840ffc1c6bb36e329ca2b 160 Pfam PF13151 Protein of unknown function (DUF3990) 1 147 4.6E-49 T 13-10-2018 IPR025051 Protein of unknown function DUF3990 TREPR_2765 d726c26ca38124c06a4de20ea8531c39 189 Pfam PF01965 DJ-1/PfpI family 3 171 9.7E-45 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TREPR_2765 d726c26ca38124c06a4de20ea8531c39 189 SUPERFAMILY SSF52317 3 186 9.6E-48 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_2765 d726c26ca38124c06a4de20ea8531c39 189 Gene3D G3DSA:3.40.50.880 1 187 2.7E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_2765 d726c26ca38124c06a4de20ea8531c39 189 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 185 7.8E-50 T 13-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 TREPR_0220 387534327f6b1acbb1efd1ecbcd70175 440 Gene3D G3DSA:3.40.190.10 22 430 7.4E-35 T 13-10-2018 TREPR_0220 387534327f6b1acbb1efd1ecbcd70175 440 SUPERFAMILY SSF53850 31 431 1.54E-31 T 13-10-2018 TREPR_0220 387534327f6b1acbb1efd1ecbcd70175 440 Pfam PF13416 Bacterial extracellular solute-binding protein 46 366 9.1E-43 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein TREPR_0224 1179b5bde58e1545c65ca9f3295207bf 128 SUPERFAMILY SSF54593 1 124 1.75E-23 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TREPR_0224 1179b5bde58e1545c65ca9f3295207bf 128 Gene3D G3DSA:3.10.180.10 1 126 8.2E-25 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TREPR_0224 1179b5bde58e1545c65ca9f3295207bf 128 Pfam PF12681 Glyoxalase-like domain 5 125 3.6E-11 T 13-10-2018 IPR025870 Glyoxalase-like domain TREPR_2394 e864bc8804fd44821f5770e57b0b71c9 328 Pfam PF01501 Glycosyl transferase family 8 91 231 5.7E-6 T 13-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 TREPR_2394 e864bc8804fd44821f5770e57b0b71c9 328 SUPERFAMILY SSF53448 3 231 3.09E-13 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1948 1b2942500e6db882d5a3e5a13c1c29cf 245 SUPERFAMILY SSF52172 3 134 2.85E-44 T 13-10-2018 IPR011006 CheY-like superfamily TREPR_1948 1b2942500e6db882d5a3e5a13c1c29cf 245 Pfam PF00072 Response regulator receiver domain 7 118 4.1E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_1948 1b2942500e6db882d5a3e5a13c1c29cf 245 Gene3D G3DSA:3.40.50.12740 4 233 1.6E-52 T 13-10-2018 TREPR_1948 1b2942500e6db882d5a3e5a13c1c29cf 245 SMART SM00448 5 118 2.1E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TREPR_2539 21b97241e09a0e00e826a3a30b2c7b4f 594 Gene3D G3DSA:3.90.550.60 6 380 3.0E-90 T 13-10-2018 TREPR_2539 21b97241e09a0e00e826a3a30b2c7b4f 594 SUPERFAMILY SSF53448 148 407 2.25E-11 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_1470 2291125a9772276b5642272da6349d4e 103 Gene3D G3DSA:3.30.2310.20 1 103 1.3E-12 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TREPR_1470 2291125a9772276b5642272da6349d4e 103 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 98 3.0E-9 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TREPR_1398 3f2a70648e9b83919b2f6ca7c0433f2e 144 Pfam PF01478 Type IV leader peptidase family 9 106 3.0E-12 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 TREPR_1767 91fc8db04c942fc24ed825bad9a3c29d 502 Pfam PF08308 PEGA domain 268 334 1.7E-4 T 13-10-2018 IPR013229 PEGA TREPR_3240 7b534aa1524cfaa87a7ed7f34c05cf70 225 Pfam PF04172 LrgB-like family 15 223 8.7E-65 T 13-10-2018 IPR007300 CidB/LrgB family TREPR_1281 44edca68d2bf8e4e98e381178d03f4d1 258 Gene3D G3DSA:3.40.50.880 1 258 1.9E-66 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_1281 44edca68d2bf8e4e98e381178d03f4d1 258 Pfam PF07722 Peptidase C26 19 230 9.1E-55 T 13-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 TREPR_1281 44edca68d2bf8e4e98e381178d03f4d1 258 SUPERFAMILY SSF52317 34 254 5.18E-32 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like TREPR_1858 24bc60dbc15a4e444b416c2ef634806a 299 Gene3D G3DSA:3.40.470.10 124 297 9.6E-10 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TREPR_1858 24bc60dbc15a4e444b416c2ef634806a 299 Pfam PF03167 Uracil DNA glycosylase superfamily 175 286 3.2E-7 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TREPR_3010 b80ed3501094ea16a30aeedd8558db09 314 Pfam PF04468 PSP1 C-terminal conserved region 102 186 6.6E-27 T 13-10-2018 IPR007557 PSP1, C-terminal TREPR_2719 5742fc545cc5f0b9509e6eeae35f3e98 147 SUPERFAMILY SSF88723 19 128 2.49E-6 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_2210 6821a0bac497776bd1885b3c91067f2d 137 Pfam PF00717 Peptidase S24-like 39 97 2.6E-8 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TREPR_2210 6821a0bac497776bd1885b3c91067f2d 137 SUPERFAMILY SSF51306 29 135 2.44E-25 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TREPR_2210 6821a0bac497776bd1885b3c91067f2d 137 Gene3D G3DSA:2.10.109.10 26 137 2.4E-22 T 13-10-2018 TREPR_1609 561c46ea906d73f0da24ba7e00d56e84 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 280 4.7E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TREPR_1609 561c46ea906d73f0da24ba7e00d56e84 294 Gene3D G3DSA:1.10.3720.10 49 290 5.0E-69 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1609 561c46ea906d73f0da24ba7e00d56e84 294 SUPERFAMILY SSF161098 54 278 3.14E-60 T 13-10-2018 IPR035906 MetI-like superfamily TREPR_1695 b3bc95371e36a740c5749b809a05e035 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 2 280 2.4E-25 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_3212 8f87ce3314a180694faf522c64983dd7 174 SUPERFAMILY SSF55469 3 167 1.7E-39 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_3212 8f87ce3314a180694faf522c64983dd7 174 Gene3D G3DSA:3.40.109.10 1 170 1.7E-44 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TREPR_3212 8f87ce3314a180694faf522c64983dd7 174 Pfam PF00881 Nitroreductase family 4 57 2.7E-16 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TREPR_0433 62f19b4d5dca81a247ee384ce36ea3ad 303 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 287 1.5E-36 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_1884 67a128bd6f8ada212d917a9c72b1fa46 993 Pfam PF13475 Domain of unknown function (DUF4116) 778 822 3.6E-6 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1884 67a128bd6f8ada212d917a9c72b1fa46 993 Pfam PF13475 Domain of unknown function (DUF4116) 824 869 4.0E-6 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1884 67a128bd6f8ada212d917a9c72b1fa46 993 Pfam PF13475 Domain of unknown function (DUF4116) 874 924 8.6E-7 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1884 67a128bd6f8ada212d917a9c72b1fa46 993 Pfam PF13475 Domain of unknown function (DUF4116) 189 234 3.3E-10 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1884 67a128bd6f8ada212d917a9c72b1fa46 993 Pfam PF13475 Domain of unknown function (DUF4116) 271 319 2.5E-7 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1884 67a128bd6f8ada212d917a9c72b1fa46 993 Pfam PF13475 Domain of unknown function (DUF4116) 498 545 3.2E-6 T 13-10-2018 IPR025197 Domain of unknown function DUF4116 TREPR_1296 04b4c368ebf06879e61cdcab759930d5 829 Pfam PF12733 Cadherin-like beta sandwich domain 548 633 6.3E-8 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_0007 a16401fd0e32d4eda0671d3497809c84 221 Pfam PF02397 Bacterial sugar transferase 3 196 1.2E-46 T 13-10-2018 IPR003362 Bacterial sugar transferase TREPR_3409 b274aaa6f3274bb1b00870b36d54e55d 111 Gene3D G3DSA:1.10.10.10 6 109 5.8E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TREPR_3409 b274aaa6f3274bb1b00870b36d54e55d 111 SUPERFAMILY SSF46767 7 89 5.36E-19 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 TREPR_3409 b274aaa6f3274bb1b00870b36d54e55d 111 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 11 88 6.6E-19 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TREPR_2626 3e858789d3a313217cc90535d47a7af0 315 SUPERFAMILY SSF110849 95 144 3.31E-7 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TREPR_3230 b3b5cad9e02bae15dd4f15d79e03e91f 352 Pfam PF12733 Cadherin-like beta sandwich domain 53 140 3.2E-8 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_0492 3af512b94a4cff2701380abf0defa09e 397 Pfam PF01594 AI-2E family transporter 46 367 4.9E-58 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like TREPR_1992 af5d110fd49beac80e36ce969c22c521 193 Pfam PF14346 Domain of unknown function (DUF4398) 15 103 7.9E-8 T 13-10-2018 IPR025511 Domain of unknown function DUF4398 TREPR_1815 5246c92a9011a0391ccb625737a3fcf2 441 Pfam PF03235 Protein of unknown function DUF262 15 186 1.7E-28 T 13-10-2018 IPR004919 Domain of unknown function DUF262 TREPR_3191 c5718a6249296fff741706e295794b5e 809 SUPERFAMILY SSF102114 372 594 1.24E-15 T 13-10-2018 TREPR_3191 c5718a6249296fff741706e295794b5e 809 SMART SM00729 396 614 1.2E-6 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TREPR_1065 f4242ebf2f4fda225a3fc5cb9e66bd4a 342 Pfam PF10974 Protein of unknown function (DUF2804) 17 340 5.2E-89 T 13-10-2018 IPR021243 Protein of unknown function DUF2804 TREPR_2652 c9388e817f0625e9004c3f384328e288 146 Gene3D G3DSA:1.20.120.610 1 146 5.6E-18 T 13-10-2018 TREPR_2652 c9388e817f0625e9004c3f384328e288 146 Pfam PF00137 ATP synthase subunit C 85 143 3.7E-11 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TREPR_2652 c9388e817f0625e9004c3f384328e288 146 Pfam PF00137 ATP synthase subunit C 6 68 1.3E-5 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TREPR_2652 c9388e817f0625e9004c3f384328e288 146 SUPERFAMILY SSF81333 81 144 2.88E-11 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TREPR_3072 00273f7b244655a847942c121f665d49 488 SUPERFAMILY SSF53300 312 446 1.42E-9 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TREPR_1869 cb64e414f8245ffb273f2f71c2022709 147 Gene3D G3DSA:3.90.1140.10 1 146 2.2E-5 T 13-10-2018 TREPR_0075 cdb8ee4fb63643dbe5808e5937951ba8 1279 Gene3D G3DSA:1.25.40.10 1074 1210 5.5E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0075 cdb8ee4fb63643dbe5808e5937951ba8 1279 SUPERFAMILY SSF48452 930 1195 7.27E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2858 b9c880c4c6413fa04db297192c66b13e 187 Pfam PF03748 Flagellar basal body-associated protein FliL 96 181 4.6E-7 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 TREPR_2835 aab6425fc4e1b7416ce36a3cc42926cb 299 Pfam PF09992 Phosphodiester glycosidase 125 298 4.1E-37 T 13-10-2018 IPR018711 Phosphodiester glycosidase TREPR_3575 fbf3165c471fc1dac8dc3d1e5e877e43 433 SUPERFAMILY SSF69322 61 338 6.8E-13 T 13-10-2018 TREPR_0063 377191f260713a94129790a0b374fc7e 272 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 85 251 2.4E-34 T 13-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 TREPR_1154 1072e504cbbd0fb816d63282ea708057 304 Pfam PF12784 PD-(D/E)XK nuclease family transposase 33 258 8.0E-18 T 13-10-2018 TREPR_2075 6e5c70cef0ad2dee717f86d245418fe5 5065 Pfam PF12245 Bacterial Ig-like domain (group 3) 954 973 0.23 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2075 6e5c70cef0ad2dee717f86d245418fe5 5065 Pfam PF12245 Bacterial Ig-like domain (group 3) 1209 1234 0.24 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2496 d2465214be7d6c9478e957407b66e692 559 Pfam PF01973 Protein of unknown function DUF115 207 370 6.0E-29 T 13-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TREPR_1764 310218036dbaed428b39f432b014c533 354 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 350 2.0E-61 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TREPR_2658 00551ce2141d2a4fda93a973285db16b 204 SUPERFAMILY SSF160527 101 197 1.44E-6 T 13-10-2018 TREPR_3180 31bc0aa77c9cbfe73852d9ef5b0a3037 477 Gene3D G3DSA:3.40.50.2000 182 301 2.2E-12 T 13-10-2018 TREPR_3180 31bc0aa77c9cbfe73852d9ef5b0a3037 477 SUPERFAMILY SSF53756 2 304 4.33E-17 T 13-10-2018 TREPR_3180 31bc0aa77c9cbfe73852d9ef5b0a3037 477 Gene3D G3DSA:3.40.50.2000 7 181 2.2E-12 T 13-10-2018 TREPR_3438 55df4a6e3d1cbb9f37eeaf7073a3c0a0 187 Pfam PF13274 Protein of unknown function (DUF4065) 27 137 1.1E-22 T 13-10-2018 IPR025272 Domain of unknown function DUF4065 TREPR_1447 5c614c426dcc829880293221f61d5d12 63 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 45 3.3E-12 T 13-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB TREPR_0047 b43d263846a0a3da4f4b2884138844d4 958 Gene3D G3DSA:2.60.40.10 439 538 1.4E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold TREPR_0047 b43d263846a0a3da4f4b2884138844d4 958 Gene3D G3DSA:2.60.40.3630 784 860 9.3E-17 T 13-10-2018 TREPR_0047 b43d263846a0a3da4f4b2884138844d4 958 Pfam PF07523 Bacterial Ig-like domain (group 3) 791 858 9.7E-10 T 13-10-2018 IPR022038 Bacterial Ig-like domain TREPR_2869 4b1b22cb87ae8aab03b07edeed003320 143 SUPERFAMILY SSF88723 2 129 1.96E-8 T 13-10-2018 IPR029060 PIN-like domain superfamily TREPR_0571 b42dc91cd29a6e36d87bd1cd8f7b288d 281 Gene3D G3DSA:1.10.530.10 120 255 1.8E-5 T 13-10-2018 TREPR_0571 b42dc91cd29a6e36d87bd1cd8f7b288d 281 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 130 253 2.5E-14 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TREPR_3079 9a7257f9b880429b7d86e8823d22c743 98 Pfam PF11823 Protein of unknown function (DUF3343) 8 72 5.5E-17 T 13-10-2018 IPR021778 Domain of unknown function DUF3343 TREPR_3734 b307d29cfcca6a117f15c5753c7891b0 306 SUPERFAMILY SSF53448 4 285 1.72E-16 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_3734 b307d29cfcca6a117f15c5753c7891b0 306 Gene3D G3DSA:3.90.550.10 3 194 1.0E-8 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TREPR_0775 7302f22fce722a6a42183a86e128004b 57 Gene3D G3DSA:3.20.20.60 2 57 2.2E-6 T 13-10-2018 TREPR_3473 c30ef161ebb49d9091a5ea00d7339c08 544 Gene3D G3DSA:2.60.40.1080 157 258 4.9E-7 T 13-10-2018 TREPR_3473 c30ef161ebb49d9091a5ea00d7339c08 544 SMART SM00635 259 336 2.1 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_3473 c30ef161ebb49d9091a5ea00d7339c08 544 SMART SM00635 158 235 0.008 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_3473 c30ef161ebb49d9091a5ea00d7339c08 544 Pfam PF02368 Bacterial Ig-like domain (group 2) 167 230 1.7E-5 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 TREPR_1625 b314331f7ab70a2018dc33a6b5c17113 192 Pfam PF13490 Putative zinc-finger 6 34 4.6E-7 T 13-10-2018 IPR027383 Putative zinc-finger TREPR_1625 b314331f7ab70a2018dc33a6b5c17113 192 Gene3D G3DSA:1.10.10.1320 1 100 4.3E-5 T 13-10-2018 TREPR_2732 eb3134f4912a070214eb75dfe53e0f64 448 Pfam PF06245 Protein of unknown function (DUF1015) 21 443 5.7E-76 T 13-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 TREPR_2369 79f09f30b90fb42a751402ab6dd77276 281 Pfam PF01061 ABC-2 type transporter 31 241 4.9E-23 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TREPR_0949 1824be8cdc22261139bdefa7466c3640 263 Pfam PF14022 Protein of unknown function (DUF4238) 5 250 1.3E-17 T 13-10-2018 IPR025332 Protein of unknown function DUF4238 TREPR_1045 aac7f73c87ae4c3164aa705e69370134 211 Pfam PF12654 Domain of unknown function (DUF3786) 20 203 3.8E-40 T 13-10-2018 IPR024264 Domain of unknown function DUF3786 TREPR_1971 631bad02be98dca9eb8985a555eab646 297 SUPERFAMILY SSF53613 3 281 1.37E-33 T 13-10-2018 IPR029056 Ribokinase-like TREPR_1971 631bad02be98dca9eb8985a555eab646 297 Pfam PF00294 pfkB family carbohydrate kinase 37 278 5.1E-5 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB TREPR_1971 631bad02be98dca9eb8985a555eab646 297 Gene3D G3DSA:3.40.1190.20 1 296 4.5E-82 T 13-10-2018 IPR029056 Ribokinase-like TREPR_1453 68d2d7d175682f8ee5475c71aa540c49 380 Pfam PF02687 FtsX-like permease family 284 373 7.0E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TREPR_1453 68d2d7d175682f8ee5475c71aa540c49 380 Pfam PF12704 MacB-like periplasmic core domain 25 228 1.5E-11 T 13-10-2018 IPR025857 MacB-like periplasmic core domain TREPR_1891 a2ccbafef621b554197fb6291ac7812b 491 Pfam PF11074 Domain of unknown function(DUF2779) 293 418 1.5E-42 T 13-10-2018 IPR021301 Domain of unknown functionDUF2779 TREPR_3392 fe086acea8f1565062304ad135b04952 556 Pfam PF01973 Protein of unknown function DUF115 178 353 8.2E-15 T 13-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like TREPR_0273 d5abe06229f85989186256d19844d223 192 Pfam PF05258 Protein of unknown function (DUF721) 4 90 4.9E-14 T 13-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 TREPR_1554 8ad4b31037ed1ae7c46419e283db0a12 180 Pfam PF10050 Predicted metal-binding protein (DUF2284) 22 179 2.9E-46 T 13-10-2018 IPR019271 Protein of unknown function DUF2284, metal-binding TREPR_1404 a887f5cd7607e2374fec17018b208fb6 844 SMART SM00710 588 616 1800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1404 a887f5cd7607e2374fec17018b208fb6 844 SMART SM00710 662 697 6400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1404 a887f5cd7607e2374fec17018b208fb6 844 SMART SM00710 756 786 5600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1404 a887f5cd7607e2374fec17018b208fb6 844 SMART SM00710 562 583 2800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1404 a887f5cd7607e2374fec17018b208fb6 844 SMART SM00710 621 647 3400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_1404 a887f5cd7607e2374fec17018b208fb6 844 SMART SM00710 729 750 110.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat TREPR_2296 01d3924708dffda363987e6e18f152d2 235 Pfam PF04773 FecR protein 65 159 4.5E-11 T 13-10-2018 IPR006860 FecR protein TREPR_3172 48b96494753dc36c682e63ac3f6303f7 589 Pfam PF12733 Cadherin-like beta sandwich domain 59 130 4.0E-7 T 13-10-2018 IPR025883 Cadherin-like beta sandwich domain TREPR_3533 e398387571da91f51524d0e520dcebc1 378 Pfam PF02653 Branched-chain amino acid transport system / permease component 78 354 8.8E-44 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_0577 0a16b9dffc5b899ee0a4911cc8a04c0c 522 Gene3D G3DSA:2.160.20.110 167 356 2.2E-18 T 13-10-2018 TREPR_1046 d42d1449f3e4b7f32d6abceabbdf1d64 349 Pfam PF13484 4Fe-4S double cluster binding domain 184 246 1.8E-12 T 13-10-2018 TREPR_1046 d42d1449f3e4b7f32d6abceabbdf1d64 349 SUPERFAMILY SSF46548 184 246 1.1E-7 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TREPR_0392 711d224cbae77daed08b34f70a880890 137 Gene3D G3DSA:3.30.428.10 13 137 3.8E-31 T 13-10-2018 IPR036265 HIT-like superfamily TREPR_0392 711d224cbae77daed08b34f70a880890 137 SUPERFAMILY SSF54197 1 137 2.55E-27 T 13-10-2018 IPR036265 HIT-like superfamily TREPR_1094 a84bc0c141215e526cdb8592df70bd26 163 Pfam PF03750 Csm2 Type III-A 43 153 8.2E-13 T 13-10-2018 IPR010149 CRISPR-associated protein, Csm2 Type III-A TREPR_1094 a84bc0c141215e526cdb8592df70bd26 163 TIGRFAM TIGR01870 cas_TM1810_Csm2: CRISPR type III-A/MTUBE-associated protein Csm2 64 154 2.4E-8 T 13-10-2018 IPR010149 CRISPR-associated protein, Csm2 Type III-A TREPR_1204 8b0d4845588389a2d647602378dbf8e3 77 Pfam PF12636 Protein of unknown function (DUF3781) 6 75 7.8E-31 T 13-10-2018 IPR024229 Protein of unknown function DUF3781 TREPR_2006 535c676a8b42cc1f867d8715674f2591 343 SUPERFAMILY SSF53850 130 311 5.87E-5 T 13-10-2018 TREPR_1811 24479cca80801f3bc19f43c3aebf180d 111 SUPERFAMILY SSF50118 1 106 2.83E-6 T 13-10-2018 TREPR_1793 d00d8706c3da8ef39328974aad0ea1b6 456 Gene3D G3DSA:2.60.40.1080 139 227 2.6E-5 T 13-10-2018 TREPR_1793 d00d8706c3da8ef39328974aad0ea1b6 456 Gene3D G3DSA:2.60.40.1080 248 338 3.7E-6 T 13-10-2018 TREPR_3857 613fae2a949e026707133cbc2c09a3e4 494 SUPERFAMILY SSF48452 401 491 6.78E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_2746 5ffae22ab3a0c13de9d6b555d7ccbddf 191 Pfam PF06541 Putative ABC-transporter type IV 14 171 7.2E-35 T 13-10-2018 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 TREPR_3484 2dc96e7ccbbb46d7454e8922179344dc 518 Pfam PF03772 Competence protein 245 494 5.3E-38 T 13-10-2018 IPR004477 ComEC/Rec2-related protein TREPR_3484 2dc96e7ccbbb46d7454e8922179344dc 518 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 267 439 3.2E-17 T 13-10-2018 IPR004477 ComEC/Rec2-related protein TREPR_2438 b301f4cce9e57ec241c4e3ec430a69c8 241 Pfam PF04773 FecR protein 72 164 9.4E-9 T 13-10-2018 IPR006860 FecR protein TREPR_1017 bf8acc998d436850ebe9061716aec5e5 83 Pfam PF12646 Domain of unknown function (DUF3783) 13 74 9.1E-18 T 13-10-2018 IPR016621 Uncharacterised conserved protein UCP014543 TREPR_1736 66d9e9269974e59c757ce79a9935a35a 321 Gene3D G3DSA:3.40.50.1820 2 320 2.5E-58 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1736 66d9e9269974e59c757ce79a9935a35a 321 SUPERFAMILY SSF53474 11 319 6.17E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold TREPR_1736 66d9e9269974e59c757ce79a9935a35a 321 Pfam PF12146 Serine aminopeptidase, S33 30 302 1.1E-55 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 TREPR_0946 a15a01b574da86203caad44a93c303e8 333 Pfam PF13280 WYL domain 148 320 9.7E-30 T 13-10-2018 IPR026881 WYL domain TREPR_3396 08f406503eb6cdc8aaaa4905c21622d8 339 Pfam PF12784 PD-(D/E)XK nuclease family transposase 17 245 5.4E-18 T 13-10-2018 TREPR_0778 74a6a557c7e4267a5ccd38b2f2d40f27 577 SUPERFAMILY SSF48452 477 571 4.32E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_0778 74a6a557c7e4267a5ccd38b2f2d40f27 577 Gene3D G3DSA:1.25.40.10 331 576 3.2E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TREPR_3880 ccf37a5af18fa9c91d5d6a16c1066fdf 67 SUPERFAMILY SSF143100 1 45 4.19E-8 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like TREPR_0796 356b6f0d9642325514e14e32654cfe10 256 Pfam PF02405 Permease MlaE 41 249 1.6E-48 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 TREPR_0823 ea8a6795f2d8e269a05330d12221e42b 74 Pfam PF12668 Protein of unknown function (DUF3791) 10 70 3.7E-21 T 13-10-2018 IPR024269 Protein of unknown function DUF3791 TREPR_0956 f7b0331a0520fcfd8a7dc31edb85a5aa 263 SUPERFAMILY SSF54506 42 260 6.8E-11 T 13-10-2018 TREPR_2776 fb2e5e94bed052a69ba368aa2360553a 363 Pfam PF04015 Domain of unknown function (DUF362) 41 231 5.8E-36 T 13-10-2018 IPR007160 Domain of unknown function DUF362 TREPR_1820 f86186b1258af1f14f56d73c58dbcb02 267 Gene3D G3DSA:1.10.4080.10 4 244 4.0E-53 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily TREPR_1820 f86186b1258af1f14f56d73c58dbcb02 267 SUPERFAMILY SSF101478 5 241 2.35E-53 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily TREPR_1820 f86186b1258af1f14f56d73c58dbcb02 267 Pfam PF03747 ADP-ribosylglycohydrolase 6 231 3.0E-34 T 13-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 TREPR_0295 67864eae0c42af67c7fd70d049ec9754 357 Pfam PF10023 Putative aminopeptidase 34 344 2.8E-87 T 13-10-2018 IPR014553 Predicted aminopeptidase TREPR_2437 cc4a61ce3bebcc524af381ef334ecf16 321 Gene3D G3DSA:2.60.40.2340 125 212 1.0E-18 T 13-10-2018 TREPR_2278 a00fc879663fa10440591f9788fd25d0 563 Pfam PF03235 Protein of unknown function DUF262 13 268 3.3E-33 T 13-10-2018 IPR004919 Domain of unknown function DUF262 TREPR_1305 bf49738980b1d570df417ebcb9e70fd2 311 SUPERFAMILY SSF55186 181 280 4.32E-7 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TREPR_1088 82c5c46de8dffaa4bf3aa5f7efc836a1 243 Pfam PF04620 Flagellar filament outer layer protein Flaa 82 220 1.3E-24 T 13-10-2018 IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 TREPR_3470 eaf02a0661c76d01bf4caf984765fa03 58 SUPERFAMILY SSF143100 4 43 2.09E-10 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like TREPR_3735 73c13c320d7bc2aaf7595d4e87689584 298 Pfam PF01531 Glycosyl transferase family 11 154 269 1.6E-18 T 13-10-2018 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 MetaCyc: PWY-7831|MetaCyc: PWY-7833 TREPR_3646 871ba3f07060d18f37169d3eea143568 182 Pfam PF03783 Curli production assembly/transport component CsgG 88 155 1.3E-6 T 13-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 TREPR_1520 c05b0c0d30fca6ee941542602e9417a7 320 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 307 1.2E-47 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_2742 df04a50d96986a54431d53212444787c 197 Pfam PF02659 Putative manganese efflux pump 31 191 5.9E-48 T 13-10-2018 IPR003810 Putative manganese efflux pump TREPR_2742 df04a50d96986a54431d53212444787c 197 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 194 22.488 T 13-10-2018 IPR022929 Putative manganese efflux pump MntP TREPR_3186 1c9d6329cc25508c28a75ae4387b9542 419 Pfam PF09243 Mitochondrial small ribosomal subunit Rsm22 156 356 1.7E-11 T 13-10-2018 IPR015324 Ribosomal protein Rsm22-like GO:0006412|GO:0008168 TREPR_0797 cc6b565b32b7bc87f5e2a726a08e6310 119 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 9 115 1.4E-15 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD TREPR_2161 12a100651b4ed2272d3525c28a4f438f 88 Pfam PF14213 STAS-like domain of unknown function (DUF4325) 28 78 5.9E-11 T 13-10-2018 IPR025474 Domain of unknown function DUF4325 TREPR_3820 0ad305489b6304d1c925f6fcc26932f1 195 Pfam PF02325 YGGT family 12 79 7.2E-14 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 TREPR_1949 4a1c7aad04600008fa10d038e1f09222 138 Pfam PF04519 Polymer-forming cytoskeletal 14 110 3.0E-22 T 13-10-2018 IPR007607 Bactofilin A/B TREPR_0338 4cd422c7ad8883b85afbc49918d4c846 436 Pfam PF01943 Polysaccharide biosynthesis protein 22 299 5.5E-12 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 TREPR_3548 3d08ac0527eb0bfa639cf74ebe6f4706 183 Pfam PF10543 ORF6N domain 11 97 3.0E-34 T 13-10-2018 IPR018873 KilA-N, DNA-binding domain TREPR_2271 ed75f2e48e4eddc7f023d7ce2723745a 85 Pfam PF13173 AAA domain 5 48 6.9E-9 T 13-10-2018 TREPR_1529 d75f0a33cf94632f56bd087b229d76df 262 Pfam PF03668 P-loop ATPase protein family 47 249 1.8E-45 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 TREPR_1616 93be6b617510c6336e741e313a347a48 372 SUPERFAMILY SSF56300 30 216 2.35E-12 T 13-10-2018 TREPR_0235 cda8399d79eb679bc40cf15970b2a35d 366 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 338 1.8E-31 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 TREPR_3642 835ecfd50b3d3707e3db62477f251793 738 Pfam PF16314 Domain of unknown function (DUF4954) 43 731 1.9E-137 T 13-10-2018 IPR032533 Protein of unknown function DUF4954 TREPR_3798 8211aed7d38ecebf68d031f19189a0d1 243 Pfam PF07796 Protein of unknown function (DUF1638) 37 213 8.5E-33 T 13-10-2018 IPR012437 Domain of unknown function DUF1638 TREPR_0881 4d24bfec94ad633d9c33002e0239af27 184 Pfam PF04970 Lecithin retinol acyltransferase 23 163 2.2E-23 T 13-10-2018 IPR007053 LRAT-like domain TREPR_0960 4b21b92cc968cf5b2ea00d3a247ff1c2 191 SUPERFAMILY SSF52980 14 181 1.14E-11 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TREPR_0315 a21c4d5bb43117baff2be18aa677dceb 137 Pfam PF04892 VanZ like family 38 116 2.6E-12 T 13-10-2018 IPR006976 VanZ-like TREPR_1027 2b9db0e1e36fa173a7d958e9bedbc10e 1039 SUPERFAMILY SSF58113 460 640 9.55E-6 T 13-10-2018 TREPR_3515 3d84a1d776b7ad25b7dc882cbbbc574a 152 Pfam PF11848 Domain of unknown function (DUF3368) 104 138 3.0E-9 T 13-10-2018 IPR021799 Protein of unknown function DUF3368 TREPR_3046 90bba03f4e47e3c3ddba9714a719e99d 607 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 363 426 4.6E-11 T 13-10-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 TREPR_3046 90bba03f4e47e3c3ddba9714a719e99d 607 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 113 370 1.8E-76 T 13-10-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 TREPR_0116 c38c87a1c4246a2c9918a7d2296a6abb 220 Pfam PF13367 Protease prsW family 37 203 3.6E-13 T 13-10-2018 IPR026898 Protease PrsW GO:0008233 TREPR_1061 ab2ff6496d45daa957d16b2103411db6 186 Pfam PF01184 GPR1/FUN34/yaaH family 8 176 8.4E-44 T 13-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 TREPR_2082 b26048016b819fdd20d2b6323edf2d86 222 Pfam PF04586 Caudovirus prohead serine protease 106 191 9.6E-7 T 13-10-2018 IPR006433 Prohead protease TREPR_3061 a0e9930f281928660165add9c92485a1 151 Pfam PF10133 Predicted RNA-binding protein 1 60 6.6E-17 T 13-10-2018 IPR019300 RNA-binding protein, predicted TREPR_2475 ff13766abd3810f84d9f7bfd00909e53 143 Pfam PF13240 zinc-ribbon domain 2 23 4.0E-9 T 13-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 TREPR_0123 a3aad5e53bfed122dc5151300a0d269f 719 Pfam PF01136 Peptidase family U32 78 289 8.1E-78 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 TREPR_3363 49e43dbf4cab4af7649ced3c14cb979f 216 Pfam PF06123 Inner membrane protein CreD 1 214 1.0E-78 T 13-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD TREPR_1890 1c6efdec66a0831bd533afed7614be27 287 Gene3D G3DSA:3.30.40.60 21 121 2.1E-7 T 13-10-2018 TREPR_3872 509be7e59d28e85ef4037adb6e8ffe8b 341 Pfam PF13280 WYL domain 147 332 2.3E-28 T 13-10-2018 IPR026881 WYL domain TREPR_0413 2ee71e1a5bb18f01c009420ca33353b1 47 Pfam PF12668 Protein of unknown function (DUF3791) 2 42 1.8E-7 T 13-10-2018 IPR024269 Protein of unknown function DUF3791