##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM21437v1 #!genome-build-accession NCBI_Assembly:GCA_000214375.1 ##sequence-region CP001843.1 1 4059867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=545694 CP001843.1 Genbank region 1 4059867 . + . ID=id0;Dbxref=taxon:545694;Is_circular=true;Name=ANONYMOUS;culture-collection=DSM:12427;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=ZAS-2 CP001843.1 Genbank gene 301 1740 . + . ID=gene0;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=TREPR_0277 CP001843.1 Genbank CDS 301 1740 . + 0 ID=cds0;Parent=gene0;Dbxref=NCBI_GP:AEF84323.1;Name=AEF84323.1;Note=identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein DnaA;protein_id=AEF84323.1;transl_table=11 CP001843.1 Genbank gene 1755 1925 . + . ID=gene1;Name=TREPR_0276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0276 CP001843.1 Genbank CDS 1755 1925 . + 0 ID=cds1;Parent=gene1;Dbxref=NCBI_GP:AEF84560.1;Name=AEF84560.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84560.1;transl_table=11 CP001843.1 Genbank gene 1938 3041 . + . ID=gene2;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=TREPR_0275 CP001843.1 Genbank CDS 1938 3041 . + 0 ID=cds2;Parent=gene2;Dbxref=NCBI_GP:AEF83611.1;Name=AEF83611.1;Note=identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663;gbkey=CDS;gene=dnaN;product=DNA polymerase III%2C beta subunit;protein_id=AEF83611.1;transl_table=11 CP001843.1 Genbank gene 3065 4174 . + . ID=gene3;Name=TREPR_0274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0274 CP001843.1 Genbank CDS 3065 4174 . + 0 ID=cds3;Parent=gene3;Dbxref=NCBI_GP:AEF86544.1;Name=AEF86544.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00611;gbkey=CDS;product=RecF protein;protein_id=AEF86544.1;transl_table=11 CP001843.1 Genbank gene 4171 4749 . + . ID=gene4;Name=TREPR_0273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0273 CP001843.1 Genbank CDS 4171 4749 . + 0 ID=cds4;Parent=gene4;Dbxref=NCBI_GP:AEF85779.1;Name=AEF85779.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85779.1;transl_table=11 CP001843.1 Genbank gene 4753 5961 . + . ID=gene5;Name=TREPR_0272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0272 CP001843.1 Genbank CDS 4753 5961 . + 0 ID=cds5;Parent=gene5;Dbxref=NCBI_GP:AEF86240.1;Name=AEF86240.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86240.1;transl_table=11 CP001843.1 Genbank gene 6003 6791 . - . ID=gene6;Name=TREPR_0271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0271 CP001843.1 Genbank CDS 6003 6791 . - 0 ID=cds6;Parent=gene6;Dbxref=NCBI_GP:AEF83740.1;Name=AEF83740.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83740.1;transl_table=11 CP001843.1 Genbank gene 6801 7661 . - . ID=gene7;Name=TREPR_0270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0270 CP001843.1 Genbank CDS 6801 7661 . - 0 ID=cds7;Parent=gene7;Dbxref=NCBI_GP:AEF86863.1;Name=AEF86863.1;Note=identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046;gbkey=CDS;product=RNA methyltransferase superfamily;protein_id=AEF86863.1;transl_table=11 CP001843.1 Genbank gene 7765 9312 . + . ID=gene8;Name=TREPR_0268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0268 CP001843.1 Genbank CDS 7765 9312 . + 0 ID=cds8;Parent=gene8;Dbxref=NCBI_GP:AEF84928.1;Name=AEF84928.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=AEF84928.1;transl_table=11 CP001843.1 Genbank gene 9328 10293 . + . ID=gene9;Name=TREPR_0267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0267 CP001843.1 Genbank CDS 9328 10293 . + 0 ID=cds9;Parent=gene9;Dbxref=NCBI_GP:AEF84558.1;Name=AEF84558.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=ribose transport system permease protein RbsC;protein_id=AEF84558.1;transl_table=11 CP001843.1 Genbank gene 10349 11290 . + . ID=gene10;Name=TREPR_0266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0266 CP001843.1 Genbank CDS 10349 11290 . + 0 ID=cds10;Parent=gene10;Dbxref=NCBI_GP:AEF85478.1;Name=AEF85478.1;Note=identified by match to protein family HMM PF00532;gbkey=CDS;product=periplasmic sugar-binding protein;protein_id=AEF85478.1;transl_table=11 CP001843.1 Genbank gene 11325 12350 . - . ID=gene11;Name=TREPR_0265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0265 CP001843.1 Genbank CDS 11325 12350 . - 0 ID=cds11;Parent=gene11;Dbxref=NCBI_GP:AEF86205.1;Name=AEF86205.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=putative transcriptional regulator%2C LacI family;protein_id=AEF86205.1;transl_table=11 CP001843.1 Genbank gene 12439 13743 . + . ID=gene12;Name=TREPR_0264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0264 CP001843.1 Genbank CDS 12439 13743 . + 0 ID=cds12;Parent=gene12;Dbxref=NCBI_GP:AEF83968.1;Name=AEF83968.1;Note=identified by match to protein family HMM PF00291;gbkey=CDS;product=threonine synthase;protein_id=AEF83968.1;transl_table=11 CP001843.1 Genbank gene 13765 15291 . + . ID=gene13;Name=TREPR_0263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0263 CP001843.1 Genbank CDS 13765 15291 . + 0 ID=cds13;Parent=gene13;Dbxref=NCBI_GP:AEF84045.1;Name=AEF84045.1;Note=identified by match to protein family HMM PF00924;gbkey=CDS;product=MscS Mechanosensitive ion channel;protein_id=AEF84045.1;transl_table=11 CP001843.1 Genbank gene 15317 16303 . - . ID=gene14;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=TREPR_0262 CP001843.1 Genbank CDS 15317 16303 . - 0 ID=cds14;Parent=gene14;Dbxref=NCBI_GP:AEF86389.1;Name=AEF86389.1;Note=identified by match to protein family HMM PF00490;gbkey=CDS;gene=hemB;product=porphobilinogen synthase;protein_id=AEF86389.1;transl_table=11 CP001843.1 Genbank gene 16304 17884 . - . ID=gene15;Name=TREPR_0261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0261 CP001843.1 Genbank CDS 16304 17884 . - 0 ID=cds15;Parent=gene15;Dbxref=NCBI_GP:AEF85381.1;Name=AEF85381.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM PF02602%3B match to protein family HMM TIGR01469;gbkey=CDS;product=uroporphyrinogen-III synthase/methyltransferase;protein_id=AEF85381.1;transl_table=11 CP001843.1 Genbank gene 17881 18882 . - . ID=gene16;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=TREPR_0260 CP001843.1 Genbank CDS 17881 18882 . - 0 ID=cds16;Parent=gene16;Dbxref=NCBI_GP:AEF85222.1;Name=AEF85222.1;Note=identified by match to protein family HMM PF01379%3B match to protein family HMM PF03900%3B match to protein family HMM TIGR00212;gbkey=CDS;gene=hemC;product=hydroxymethylbilane synthase;protein_id=AEF85222.1;transl_table=11 CP001843.1 Genbank gene 18879 19457 . - . ID=gene17;Name=TREPR_0259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0259 CP001843.1 Genbank CDS 18879 19457 . - 0 ID=cds17;Parent=gene17;Dbxref=NCBI_GP:AEF84001.1;Name=AEF84001.1;Note=identified by match to protein family HMM TIGR01470;gbkey=CDS;product=siroheme synthase;protein_id=AEF84001.1;transl_table=11 CP001843.1 Genbank gene 19459 19863 . - . ID=gene18;Name=TREPR_0258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0258 CP001843.1 Genbank CDS 19459 19863 . - 0 ID=cds18;Parent=gene18;Dbxref=NCBI_GP:AEF86814.1;Name=AEF86814.1;Note=identified by match to protein family HMM PF01398;gbkey=CDS;product=Mov34/MPN/PAD-1;protein_id=AEF86814.1;transl_table=11 CP001843.1 Genbank gene 19857 20129 . - . ID=gene19;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=TREPR_0257 CP001843.1 Genbank CDS 19857 20129 . - 0 ID=cds19;Parent=gene19;Dbxref=NCBI_GP:AEF84708.1;Name=AEF84708.1;Note=identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01683;gbkey=CDS;gene=thiS;product=thiamine biosynthesis protein ThiS;protein_id=AEF84708.1;transl_table=11 CP001843.1 Genbank gene 20160 21362 . + . ID=gene20;Name=TREPR_0256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0256 CP001843.1 Genbank CDS 20160 21362 . + 0 ID=cds20;Parent=gene20;Dbxref=NCBI_GP:AEF84480.1;Name=AEF84480.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260;gbkey=CDS;product=threonine synthase;protein_id=AEF84480.1;transl_table=11 CP001843.1 Genbank gene 21474 22541 . + . ID=gene21;Name=TREPR_0255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0255 CP001843.1 Genbank CDS 21474 22541 . + 0 ID=cds21;Parent=gene21;Dbxref=NCBI_GP:AEF83745.1;Name=AEF83745.1;Note=identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR00971;gbkey=CDS;product=sulfate-binding protein (Sulfate starvation-induced protein2) (SSI2);protein_id=AEF83745.1;transl_table=11 CP001843.1 Genbank gene 22551 23396 . + . ID=gene22;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=TREPR_0254 CP001843.1 Genbank CDS 22551 23396 . + 0 ID=cds22;Parent=gene22;Dbxref=NCBI_GP:AEF86338.1;Name=AEF86338.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00969%3B match to protein family HMM TIGR02139;gbkey=CDS;gene=cysT;product=sulfate ABC transporter%2C permease protein CysT;protein_id=AEF86338.1;transl_table=11 CP001843.1 Genbank gene 23393 24238 . + . ID=gene23;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=TREPR_0253 CP001843.1 Genbank CDS 23393 24238 . + 0 ID=cds23;Parent=gene23;Dbxref=NCBI_GP:AEF85480.1;Name=AEF85480.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00969%3B match to protein family HMM TIGR02140;gbkey=CDS;gene=cysW;product=sulfate ABC transporter%2C permease protein CysW;protein_id=AEF85480.1;transl_table=11 CP001843.1 Genbank gene 24250 25317 . + . ID=gene24;Name=TREPR_0252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0252 CP001843.1 Genbank CDS 24250 25317 . + 0 ID=cds24;Parent=gene24;Dbxref=NCBI_GP:AEF85147.1;Name=AEF85147.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00968;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA;protein_id=AEF85147.1;transl_table=11 CP001843.1 Genbank gene 25307 26017 . + . ID=gene25;Name=TREPR_0251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0251 CP001843.1 Genbank CDS 25307 26017 . + 0 ID=cds25;Parent=gene25;Dbxref=NCBI_GP:AEF84363.1;Name=AEF84363.1;Note=identified by match to protein family HMM PF01507;gbkey=CDS;product=adenosine 5'-phosphosulfate reductase;protein_id=AEF84363.1;transl_table=11 CP001843.1 Genbank gene 26014 26910 . + . ID=gene26;Name=TREPR_0250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0250 CP001843.1 Genbank CDS 26014 26910 . + 0 ID=cds26;Parent=gene26;Dbxref=NCBI_GP:AEF86687.1;Name=AEF86687.1;Note=identified by match to protein family HMM PF01507;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=AEF86687.1;transl_table=11 CP001843.1 Genbank gene 26910 28295 . + . ID=gene27;Name=TREPR_0249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0249 CP001843.1 Genbank CDS 26910 28295 . + 0 ID=cds27;Parent=gene27;Dbxref=NCBI_GP:AEF85914.1;Name=AEF85914.1;Note=identified by match to protein family HMM PF00009;gbkey=CDS;product=sulfate adenylyltransferase subunit 1;protein_id=AEF85914.1;transl_table=11 CP001843.1 Genbank gene 28502 29380 . + . ID=gene28;Name=TREPR_0248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0248 CP001843.1 Genbank CDS 28502 29380 . + 0 ID=cds28;Parent=gene28;Dbxref=NCBI_GP:AEF85643.1;Name=AEF85643.1;Note=identified by match to protein family HMM PF00142;gbkey=CDS;product=nitrogenase iron protein 1 (Nitrogenase component II)(Nitrogenase Fe protein 1) (Nitrogenase reductase);protein_id=AEF85643.1;transl_table=11 CP001843.1 Genbank gene 29477 30799 . + . ID=gene29;Name=TREPR_0247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0247 CP001843.1 Genbank CDS 29477 30799 . + 0 ID=cds29;Parent=gene29;Dbxref=NCBI_GP:AEF84792.1;Name=AEF84792.1;Note=identified by match to protein family HMM PF00148;gbkey=CDS;product=putative oxidoreductase/nitrogenase%2C component 1;protein_id=AEF84792.1;transl_table=11 CP001843.1 Genbank gene 30802 32160 . + . ID=gene30;Name=TREPR_0246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0246 CP001843.1 Genbank CDS 30802 32160 . + 0 ID=cds30;Parent=gene30;Dbxref=NCBI_GP:AEF85372.1;Name=AEF85372.1;Note=identified by match to protein family HMM PF00148;gbkey=CDS;product=oxidoreductase/nitrogenase%2C component 1;protein_id=AEF85372.1;transl_table=11 CP001843.1 Genbank gene 32180 33028 . - . ID=gene31;Name=TREPR_0245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0245 CP001843.1 Genbank CDS 32180 33028 . - 0 ID=cds31;Parent=gene31;Dbxref=NCBI_GP:AEF84232.1;Name=AEF84232.1;Note=identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237;gbkey=CDS;product=Uba/ThiF-type NAD/FAD-binding protein;protein_id=AEF84232.1;transl_table=11 CP001843.1 Genbank gene 33039 33293 . - . ID=gene32;Name=TREPR_0244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0244 CP001843.1 Genbank CDS 33039 33293 . - 0 ID=cds32;Parent=gene32;Dbxref=NCBI_GP:AEF86965.1;Name=AEF86965.1;Note=identified by match to protein family HMM PF01206;gbkey=CDS;product=SirA family protein;protein_id=AEF86965.1;transl_table=11 CP001843.1 Genbank gene 33290 34156 . - . ID=gene33;Name=TREPR_0243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0243 CP001843.1 Genbank CDS 33290 34156 . - 0 ID=cds33;Parent=gene33;Dbxref=NCBI_GP:AEF86601.1;Name=AEF86601.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01077%3B match to protein family HMM PF03460;gbkey=CDS;product=nitrite/sulfite reductase%2C 4Fe-4S iron-sulfur cluster-binding domain protein;protein_id=AEF86601.1;transl_table=11 CP001843.1 Genbank gene 34257 35549 . - . ID=gene34;Name=TREPR_0242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0242 CP001843.1 Genbank CDS 34257 35549 . - 0 ID=cds34;Parent=gene34;Dbxref=NCBI_GP:AEF83626.1;Name=AEF83626.1;Note=identified by match to protein family HMM TIGR00277;gbkey=CDS;product=putative RNA nucleotidyltransferase;protein_id=AEF83626.1;transl_table=11 CP001843.1 Genbank gene 35628 39512 . - . ID=gene35;Name=TREPR_0241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0241 CP001843.1 Genbank CDS 35628 39512 . - 0 ID=cds35;Parent=gene35;Dbxref=NCBI_GP:AEF84610.1;Name=AEF84610.1;Note=identified by match to protein family HMM PF00128;gbkey=CDS;product=alpha amylase catalytic region;protein_id=AEF84610.1;transl_table=11 CP001843.1 Genbank gene 39525 41555 . - . ID=gene36;Name=TREPR_0240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0240 CP001843.1 Genbank CDS 39525 41555 . - 0 ID=cds36;Parent=gene36;Dbxref=NCBI_GP:AEF85120.1;Name=AEF85120.1;Note=identified by match to protein family HMM PF02446;gbkey=CDS;product=4-alpha-glucanotransferase (Amylomaltase)(Disproportionating enzyme) (D-enzyme);protein_id=AEF85120.1;transl_table=11 CP001843.1 Genbank gene 41722 43269 . + . ID=gene37;Name=TREPR_0239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0239 CP001843.1 Genbank CDS 41722 43269 . + 0 ID=cds37;Parent=gene37;Dbxref=NCBI_GP:AEF86112.1;Name=AEF86112.1;Note=identified by match to protein family HMM PF07556;gbkey=CDS;product=membrane protein;protein_id=AEF86112.1;transl_table=11 CP001843.1 Genbank gene 43256 43966 . + . ID=gene38;Name=TREPR_0238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0238 CP001843.1 Genbank CDS 43256 43966 . + 0 ID=cds38;Parent=gene38;Dbxref=NCBI_GP:AEF86543.1;Name=AEF86543.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86543.1;transl_table=11 CP001843.1 Genbank gene 43968 44837 . + . ID=gene39;Name=TREPR_0237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0237 CP001843.1 Genbank CDS 43968 44837 . + 0 ID=cds39;Parent=gene39;Dbxref=NCBI_GP:AEF83996.1;Name=AEF83996.1;Note=identified by match to protein family HMM PF01988;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83996.1;transl_table=11 CP001843.1 Genbank gene 44906 45814 . - . ID=gene40;Name=TREPR_0236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0236 CP001843.1 Genbank CDS 44906 45814 . - 0 ID=cds40;Parent=gene40;Dbxref=NCBI_GP:AEF86374.1;Name=AEF86374.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF86374.1;transl_table=11 CP001843.1 Genbank gene 45811 46911 . - . ID=gene41;Name=TREPR_0235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0235 CP001843.1 Genbank CDS 45811 46911 . - 0 ID=cds41;Parent=gene41;Dbxref=NCBI_GP:AEF84289.1;Name=AEF84289.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=AEF84289.1;transl_table=11 CP001843.1 Genbank gene 46904 48457 . - . ID=gene42;Name=TREPR_0234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0234 CP001843.1 Genbank CDS 46904 48457 . - 0 ID=cds42;Parent=gene42;Dbxref=NCBI_GP:AEF84782.1;Name=AEF84782.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ribose import ATP-binding protein RbsA 1;protein_id=AEF84782.1;transl_table=11 CP001843.1 Genbank gene 48491 49579 . - . ID=gene43;Name=TREPR_0233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0233 CP001843.1 Genbank CDS 48491 49579 . - 0 ID=cds43;Parent=gene43;Dbxref=NCBI_GP:AEF84639.1;Name=AEF84639.1;Note=identified by match to protein family HMM PF02608;gbkey=CDS;product=MemBrane lipoprotein TpN38(b);protein_id=AEF84639.1;transl_table=11 CP001843.1 Genbank binding_site 49634 49776 . - . ID=id1;Note=FMN riboswitch (RFN element)%3B Rfam score 62.41;bound_moiety=flavin mononucleotide;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00050 CP001843.1 Genbank gene 49751 49864 . - . ID=gene44;Name=TREPR_0232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0232 CP001843.1 Genbank CDS 49751 49864 . - 0 ID=cds44;Parent=gene44;Dbxref=NCBI_GP:AEF85166.1;Name=AEF85166.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85166.1;transl_table=11 CP001843.1 Genbank gene 49877 50491 . - . ID=gene45;Name=TREPR_0231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0231 CP001843.1 Genbank CDS 49877 50491 . - 0 ID=cds45;Parent=gene45;Dbxref=NCBI_GP:AEF85926.1;Name=AEF85926.1;Note=identified by match to protein family HMM PF00085%3B match to protein family HMM PF00578%3B match to protein family HMM PF08534;gbkey=CDS;product=redoxin;protein_id=AEF85926.1;transl_table=11 CP001843.1 Genbank gene 50526 51497 . - . ID=gene46;Name=TREPR_0230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0230 CP001843.1 Genbank CDS 50526 51497 . - 0 ID=cds46;Parent=gene46;Dbxref=NCBI_GP:AEF86177.1;Name=AEF86177.1;Note=identified by match to protein family HMM PF02683;gbkey=CDS;product=cytochrome c biogenesis protein;protein_id=AEF86177.1;transl_table=11 CP001843.1 Genbank gene 51714 53819 . + . ID=gene47;Name=TREPR_0229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0229 CP001843.1 Genbank CDS 51714 53819 . + 0 ID=cds47;Parent=gene47;Dbxref=NCBI_GP:AEF84343.1;Name=AEF84343.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01053%3B match to protein family HMM TIGR01326;gbkey=CDS;product=O-acetylhomoserine (thiol)-lyase (O-acetylhomoserinesulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase);protein_id=AEF84343.1;transl_table=11 CP001843.1 Genbank gene 54022 54408 . + . ID=gene48;Name=TREPR_0228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0228 CP001843.1 Genbank CDS 54022 54408 . + 0 ID=cds48;Parent=gene48;Dbxref=NCBI_GP:AEF84804.1;Name=AEF84804.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84804.1;transl_table=11 CP001843.1 Genbank gene 54448 55920 . + . ID=gene49;Name=TREPR_0227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0227 CP001843.1 Genbank CDS 54448 55920 . + 0 ID=cds49;Parent=gene49;Dbxref=NCBI_GP:AEF85578.1;Name=AEF85578.1;Note=identified by match to protein family HMM PF00206;gbkey=CDS;product=putative adenylosuccinate lyase;protein_id=AEF85578.1;transl_table=11 CP001843.1 Genbank gene 55944 57380 . + . ID=gene50;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=TREPR_0226 CP001843.1 Genbank CDS 55944 57380 . + 0 ID=cds50;Parent=gene50;Dbxref=NCBI_GP:AEF85900.1;Name=AEF85900.1;Note=identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01302;gbkey=CDS;gene=guaB;product=inosine-5'-monophosphate dehydrogenase;protein_id=AEF85900.1;transl_table=11 CP001843.1 Genbank gene 57401 58033 . - . ID=gene51;Name=TREPR_0225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0225 CP001843.1 Genbank CDS 57401 58033 . - 0 ID=cds51;Parent=gene51;Dbxref=NCBI_GP:AEF86667.1;Name=AEF86667.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86667.1;transl_table=11 CP001843.1 Genbank gene 58035 58421 . - . ID=gene52;Name=TREPR_0224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0224 CP001843.1 Genbank CDS 58035 58421 . - 0 ID=cds52;Parent=gene52;Dbxref=NCBI_GP:AEF84295.1;Name=AEF84295.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxalase family protein;protein_id=AEF84295.1;transl_table=11 CP001843.1 Genbank gene 58517 60043 . - . ID=gene53;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=TREPR_0223 CP001843.1 Genbank CDS 58517 60043 . - 0 ID=cds53;Parent=gene53;Dbxref=NCBI_GP:AEF86569.1;Name=AEF86569.1;Note=identified by match to protein family HMM PF02446%3B match to protein family HMM TIGR00217;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=AEF86569.1;transl_table=11 CP001843.1 Genbank gene 60048 60902 . - . ID=gene54;Name=TREPR_0222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0222 CP001843.1 Genbank CDS 60048 60902 . - 0 ID=cds54;Parent=gene54;Dbxref=NCBI_GP:AEF86108.1;Name=AEF86108.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=sugar permease;protein_id=AEF86108.1;transl_table=11 CP001843.1 Genbank gene 60899 61741 . - . ID=gene55;Name=TREPR_0221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0221 CP001843.1 Genbank CDS 60899 61741 . - 0 ID=cds55;Parent=gene55;Dbxref=NCBI_GP:AEF84978.1;Name=AEF84978.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC-type sugar transport system%2C permease component;protein_id=AEF84978.1;transl_table=11 CP001843.1 Genbank gene 61820 63142 . - . ID=gene56;Name=TREPR_0220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0220 CP001843.1 Genbank CDS 61820 63142 . - 0 ID=cds56;Parent=gene56;Dbxref=NCBI_GP:AEF83568.1;Name=AEF83568.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=maltose-binding protein;protein_id=AEF83568.1;transl_table=11 CP001843.1 Genbank gene 63334 64566 . + . ID=gene57;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=TREPR_0219 CP001843.1 Genbank CDS 63334 64566 . + 0 ID=cds57;Parent=gene57;Dbxref=NCBI_GP:AEF84261.1;Name=AEF84261.1;Note=identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184;gbkey=CDS;gene=purA;product=adenylosuccinate synthase;protein_id=AEF84261.1;transl_table=11 CP001843.1 Genbank gene 64646 66319 . + . ID=gene58;Name=TREPR_0218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0218 CP001843.1 Genbank CDS 64646 66319 . + 0 ID=cds58;Parent=gene58;Dbxref=NCBI_GP:AEF85522.1;Name=AEF85522.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888;gbkey=CDS;product=GMP synthase (glutamine-hydrolyzing);protein_id=AEF85522.1;transl_table=11 CP001843.1 Genbank gene 66589 66819 . + . ID=gene59;Name=TREPR_0217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0217 CP001843.1 Genbank CDS 66589 66819 . + 0 ID=cds59;Parent=gene59;Dbxref=NCBI_GP:AEF84553.1;Name=AEF84553.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84553.1;transl_table=11 CP001843.1 Genbank gene 66816 67217 . + . ID=gene60;Name=TREPR_0216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0216 CP001843.1 Genbank CDS 66816 67217 . + 0 ID=cds60;Parent=gene60;Dbxref=NCBI_GP:AEF84746.1;Name=AEF84746.1;gbkey=CDS;product=PIN domain protein;protein_id=AEF84746.1;transl_table=11 CP001843.1 Genbank gene 67265 68143 . - . ID=gene61;Name=TREPR_0215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0215 CP001843.1 Genbank CDS 67265 68143 . - 0 ID=cds61;Parent=gene61;Dbxref=NCBI_GP:AEF83764.1;Name=AEF83764.1;Note=identified by match to protein family HMM PF08843;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83764.1;transl_table=11 CP001843.1 Genbank gene 68140 68823 . - . ID=gene62;Name=TREPR_0214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0214 CP001843.1 Genbank CDS 68140 68823 . - 0 ID=cds62;Parent=gene62;Dbxref=NCBI_GP:AEF86790.1;Name=AEF86790.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86790.1;transl_table=11 CP001843.1 Genbank gene 68933 69157 . + . ID=gene63;Name=TREPR_0213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0213 CP001843.1 Genbank CDS 68933 69157 . + 0 ID=cds63;Parent=gene63;Dbxref=NCBI_GP:AEF86608.1;Name=AEF86608.1;gbkey=CDS;product=putative virulence protein;protein_id=AEF86608.1;transl_table=11 CP001843.1 Genbank gene 69120 69557 . + . ID=gene64;Name=TREPR_0212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0212 CP001843.1 Genbank CDS 69120 69557 . + 0 ID=cds64;Parent=gene64;Dbxref=NCBI_GP:AEF84722.1;Name=AEF84722.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=putative virulence-associated protein;protein_id=AEF84722.1;transl_table=11 CP001843.1 Genbank gene 69569 69706 . - . ID=gene65;Name=TREPR_0211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0211 CP001843.1 Genbank CDS 69569 69706 . - 0 ID=cds65;Parent=gene65;Dbxref=NCBI_GP:AEF83761.1;Name=AEF83761.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83761.1;transl_table=11 CP001843.1 Genbank gene 69853 70815 . + . ID=gene66;Name=TREPR_0210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0210 CP001843.1 Genbank CDS 69853 70815 . + 0 ID=cds66;Parent=gene66;Dbxref=NCBI_GP:AEF83844.1;Name=AEF83844.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993;gbkey=CDS;product=UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1);protein_id=AEF83844.1;transl_table=11 CP001843.1 Genbank gene 70859 72220 . + . ID=gene67;Name=TREPR_0209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0209 CP001843.1 Genbank CDS 70859 72220 . + 0 ID=cds67;Parent=gene67;Dbxref=NCBI_GP:AEF86392.1;Name=AEF86392.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF86392.1;transl_table=11 CP001843.1 Genbank gene 72221 73042 . + . ID=gene68;Name=TREPR_0207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0207 CP001843.1 Genbank CDS 72221 73042 . + 0 ID=cds68;Parent=gene68;Dbxref=NCBI_GP:AEF85245.1;Name=AEF85245.1;Note=identified by match to protein family HMM TIGR01444;gbkey=CDS;product=methyltransferase FkbM family;protein_id=AEF85245.1;transl_table=11 CP001843.1 Genbank pseudogene 73099 73509 . + . ID=gene69;Name=TREPR_0206;Note=conserved hypothetical protein%3B this region contains one or more premature stops and/or frameshifts;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0206;pseudo=true CP001843.1 Genbank pseudogene 73733 73990 . + . ID=gene70;Name=TREPR_0204;Note=conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0204;pseudo=true CP001843.1 Genbank gene 74016 75029 . + . ID=gene71;Name=TREPR_0203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0203 CP001843.1 Genbank CDS 74016 75029 . + 0 ID=cds69;Parent=gene71;Dbxref=NCBI_GP:AEF86656.1;Name=AEF86656.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C family 2;protein_id=AEF86656.1;transl_table=11 CP001843.1 Genbank gene 75026 75928 . + . ID=gene72;Name=TREPR_0202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0202 CP001843.1 Genbank CDS 75026 75928 . + 0 ID=cds70;Parent=gene72;Dbxref=NCBI_GP:AEF84275.1;Name=AEF84275.1;Note=identified by match to protein family HMM PF01370%3B match to protein family HMM PF04321;gbkey=CDS;product=dtdp-4-dehydrorhamnose reductase;protein_id=AEF84275.1;transl_table=11 CP001843.1 Genbank gene 75939 77114 . + . ID=gene73;Name=TREPR_0201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0201 CP001843.1 Genbank CDS 75939 77114 . + 0 ID=cds71;Parent=gene73;Dbxref=NCBI_GP:AEF85512.1;Name=AEF85512.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF85512.1;transl_table=11 CP001843.1 Genbank gene 77215 78372 . + . ID=gene74;Name=TREPR_0200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0200 CP001843.1 Genbank CDS 77215 78372 . + 0 ID=cds72;Parent=gene74;Dbxref=NCBI_GP:AEF85503.1;Name=AEF85503.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85503.1;transl_table=11 CP001843.1 Genbank gene 78445 78570 . + . ID=gene75;Name=TREPR_0199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0199 CP001843.1 Genbank CDS 78445 78570 . + 0 ID=cds73;Parent=gene75;Dbxref=NCBI_GP:AEF86178.1;Name=AEF86178.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86178.1;transl_table=11 CP001843.1 Genbank pseudogene 78581 78751 . + . ID=gene76;Name=TREPR_0198;Note=methyltransferase type 11%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0198;pseudo=true CP001843.1 Genbank pseudogene 78818 79132 . + . ID=gene77;Name=TREPR_0197;Note=methyltransferase type 11%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0197;pseudo=true CP001843.1 Genbank gene 79190 80074 . + . ID=gene78;Name=TREPR_0196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0196 CP001843.1 Genbank CDS 79190 80074 . + 0 ID=cds74;Parent=gene78;Dbxref=NCBI_GP:AEF87014.1;Name=AEF87014.1;gbkey=CDS;product=methyltransferase FkbM;protein_id=AEF87014.1;transl_table=11 CP001843.1 Genbank gene 80146 81249 . + . ID=gene79;Name=TREPR_0195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0195 CP001843.1 Genbank CDS 80146 81249 . + 0 ID=cds75;Parent=gene79;Dbxref=NCBI_GP:AEF84125.1;Name=AEF84125.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=WfbF;protein_id=AEF84125.1;transl_table=11 CP001843.1 Genbank gene 81253 82020 . + . ID=gene80;Name=TREPR_0194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0194 CP001843.1 Genbank CDS 81253 82020 . + 0 ID=cds76;Parent=gene80;Dbxref=NCBI_GP:AEF85586.1;Name=AEF85586.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C group 2 family;protein_id=AEF85586.1;transl_table=11 CP001843.1 Genbank gene 82437 83168 . + . ID=gene81;Name=TREPR_0193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0193 CP001843.1 Genbank CDS 82437 83168 . + 0 ID=cds77;Parent=gene81;Dbxref=NCBI_GP:AEF83794.1;Name=AEF83794.1;gbkey=CDS;product=putative lipopolysaccharide biosynthesis protein;protein_id=AEF83794.1;transl_table=11 CP001843.1 Genbank gene 83165 84631 . + . ID=gene82;Name=TREPR_0192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0192 CP001843.1 Genbank CDS 83165 84631 . + 0 ID=cds78;Parent=gene82;Dbxref=NCBI_GP:AEF84784.1;Name=AEF84784.1;Note=identified by match to protein family HMM PF02563;gbkey=CDS;product=putative ClpX%2C ATPase regulatory subunit;protein_id=AEF84784.1;transl_table=11 CP001843.1 Genbank gene 84721 85575 . + . ID=gene83;Name=TREPR_0191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0191 CP001843.1 Genbank CDS 84721 85575 . + 0 ID=cds79;Parent=gene83;Dbxref=NCBI_GP:AEF84765.1;Name=AEF84765.1;Note=identified by match to protein family HMM PF08241;gbkey=CDS;product=methyltransferase family protein;protein_id=AEF84765.1;transl_table=11 CP001843.1 Genbank gene 85559 87334 . + . ID=gene84;Name=TREPR_0190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0190 CP001843.1 Genbank CDS 85559 87334 . + 0 ID=cds80;Parent=gene84;Dbxref=NCBI_GP:AEF86621.1;Name=AEF86621.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;product=sulfatase domain protein;protein_id=AEF86621.1;transl_table=11 CP001843.1 Genbank gene 87419 87814 . - . ID=gene85;Name=TREPR_0189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0189 CP001843.1 Genbank CDS 87419 87814 . - 0 ID=cds81;Parent=gene85;Dbxref=NCBI_GP:AEF84088.1;Name=AEF84088.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=PilT protein domain protein;protein_id=AEF84088.1;transl_table=11 CP001843.1 Genbank gene 87811 88050 . - . ID=gene86;Name=TREPR_0188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0188 CP001843.1 Genbank CDS 87811 88050 . - 0 ID=cds82;Parent=gene86;Dbxref=NCBI_GP:AEF85183.1;Name=AEF85183.1;Note=identified by match to protein family HMM TIGR01552;gbkey=CDS;product=putative prevent-host-death family protein;protein_id=AEF85183.1;transl_table=11 CP001843.1 Genbank gene 88147 88434 . + . ID=gene87;Name=TREPR_0187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0187 CP001843.1 Genbank CDS 88147 88434 . + 0 ID=cds83;Parent=gene87;Dbxref=NCBI_GP:AEF85195.1;Name=AEF85195.1;Note=identified by match to protein family HMM TIGR01552;gbkey=CDS;product=prevent-host-death family protein;protein_id=AEF85195.1;transl_table=11 CP001843.1 Genbank gene 88431 88814 . + . ID=gene88;Name=TREPR_0186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0186 CP001843.1 Genbank CDS 88431 88814 . + 0 ID=cds84;Parent=gene88;Dbxref=NCBI_GP:AEF85298.1;Name=AEF85298.1;Note=identified by match to protein family HMM TIGR00305;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85298.1;transl_table=11 CP001843.1 Genbank gene 89156 90346 . - . ID=gene89;Name=TREPR_0185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0185 CP001843.1 Genbank CDS 89156 90346 . - 0 ID=cds85;Parent=gene89;Dbxref=NCBI_GP:AEF86324.1;Name=AEF86324.1;Note=identified by match to protein family HMM PF01094;gbkey=CDS;product=extracellular ligand-binding receptor;protein_id=AEF86324.1;transl_table=11 CP001843.1 Genbank gene 90446 91513 . - . ID=gene90;Name=TREPR_0184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0184 CP001843.1 Genbank CDS 90446 91513 . - 0 ID=cds86;Parent=gene90;Dbxref=NCBI_GP:AEF83800.1;Name=AEF83800.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=putative signaling protein;protein_id=AEF83800.1;transl_table=11 CP001843.1 Genbank gene 91482 92903 . - . ID=gene91;Name=TREPR_0183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0183 CP001843.1 Genbank CDS 91482 92903 . - 0 ID=cds87;Parent=gene91;Dbxref=NCBI_GP:AEF87032.1;Name=AEF87032.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=multi-sensor hybrid histidine kinase;protein_id=AEF87032.1;transl_table=11 CP001843.1 Genbank gene 92921 93436 . - . ID=gene92;Name=TREPR_0182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0182 CP001843.1 Genbank CDS 92921 93436 . - 0 ID=cds88;Parent=gene92;Dbxref=NCBI_GP:AEF84062.1;Name=AEF84062.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=MutT/NUDIX family protein;protein_id=AEF84062.1;transl_table=11 CP001843.1 Genbank gene 93435 93890 . + . ID=gene93;Name=TREPR_0181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0181 CP001843.1 Genbank CDS 93435 93890 . + 0 ID=cds89;Parent=gene93;Dbxref=NCBI_GP:AEF85775.1;Name=AEF85775.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00051;gbkey=CDS;product=thioesterase family protein;protein_id=AEF85775.1;transl_table=11 CP001843.1 Genbank gene 93895 97914 . - . ID=gene94;Name=TREPR_0180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0180 CP001843.1 Genbank CDS 93895 97914 . - 0 ID=cds90;Parent=gene94;Dbxref=NCBI_GP:AEF86749.1;Name=AEF86749.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF01841%3B match to protein family HMM PF07719;gbkey=CDS;product=putative membrane protein;protein_id=AEF86749.1;transl_table=11 CP001843.1 Genbank gene 97892 99085 . - . ID=gene95;Name=TREPR_0179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0179 CP001843.1 Genbank CDS 97892 99085 . - 0 ID=cds91;Parent=gene95;Dbxref=NCBI_GP:AEF83923.1;Name=AEF83923.1;Note=identified by match to protein family HMM PF01882;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83923.1;transl_table=11 CP001843.1 Genbank gene 99054 100004 . - . ID=gene96;Name=TREPR_0178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0178 CP001843.1 Genbank CDS 99054 100004 . - 0 ID=cds92;Parent=gene96;Dbxref=NCBI_GP:AEF84412.1;Name=AEF84412.1;Note=identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728;gbkey=CDS;product=ATPase%2C AAA family;protein_id=AEF84412.1;transl_table=11 CP001843.1 Genbank gene 100170 101258 . + . ID=gene97;Name=TREPR_0177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0177 CP001843.1 Genbank CDS 100170 101258 . + 0 ID=cds93;Parent=gene97;Dbxref=NCBI_GP:AEF84584.1;Name=AEF84584.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84584.1;transl_table=11 CP001843.1 Genbank gene 101409 102164 . + . ID=gene98;Name=TREPR_0176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0176 CP001843.1 Genbank CDS 101409 102164 . + 0 ID=cds94;Parent=gene98;Dbxref=NCBI_GP:AEF85117.1;Name=AEF85117.1;Note=identified by match to protein family HMM PF03330;gbkey=CDS;product=rare lipoprotein A;protein_id=AEF85117.1;transl_table=11 CP001843.1 Genbank gene 102564 104477 . + . ID=gene99;Name=TREPR_0175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0175 CP001843.1 Genbank CDS 102564 104477 . + 0 ID=cds95;Parent=gene99;Dbxref=NCBI_GP:AEF86159.1;Name=AEF86159.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=AMP-binding enzyme family protein;protein_id=AEF86159.1;transl_table=11 CP001843.1 Genbank gene 104531 105418 . - . ID=gene100;Name=TREPR_0174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0174 CP001843.1 Genbank CDS 104531 105418 . - 0 ID=cds96;Parent=gene100;Dbxref=NCBI_GP:AEF86721.1;Name=AEF86721.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86721.1;transl_table=11 CP001843.1 Genbank gene 105418 106680 . - . ID=gene101;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=TREPR_0173 CP001843.1 Genbank CDS 105418 106680 . - 0 ID=cds97;Parent=gene101;Dbxref=NCBI_GP:AEF85526.1;Name=AEF85526.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01882;gbkey=CDS;gene=pepT;product=peptidase T;protein_id=AEF85526.1;transl_table=11 CP001843.1 Genbank gene 106946 107845 . + . ID=gene102;Name=TREPR_0171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0171 CP001843.1 Genbank CDS 106946 107845 . + 0 ID=cds98;Parent=gene102;Dbxref=NCBI_GP:AEF84420.1;Name=AEF84420.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=nitrate transport ATP-binding protein NrtC;protein_id=AEF84420.1;transl_table=11 CP001843.1 Genbank gene 107847 108683 . + . ID=gene103;Name=TREPR_0170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0170 CP001843.1 Genbank CDS 107847 108683 . + 0 ID=cds99;Parent=gene103;Dbxref=NCBI_GP:AEF83647.1;Name=AEF83647.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=taurine transport system permease protein TauC;protein_id=AEF83647.1;transl_table=11 CP001843.1 Genbank gene 108749 109810 . + . ID=gene104;Name=TREPR_0169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0169 CP001843.1 Genbank CDS 108749 109810 . + 0 ID=cds100;Parent=gene104;Dbxref=NCBI_GP:AEF84145.1;Name=AEF84145.1;gbkey=CDS;product=ABC transporter component A;protein_id=AEF84145.1;transl_table=11 CP001843.1 Genbank gene 109825 111102 . + . ID=gene105;Name=TREPR_0168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0168 CP001843.1 Genbank CDS 109825 111102 . + 0 ID=cds101;Parent=gene105;Dbxref=NCBI_GP:AEF85561.1;Name=AEF85561.1;gbkey=CDS;product=putative radical SAM domain protein;protein_id=AEF85561.1;transl_table=11 CP001843.1 Genbank gene 111117 111602 . + . ID=gene106;Name=TREPR_0167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0167 CP001843.1 Genbank CDS 111117 111602 . + 0 ID=cds102;Parent=gene106;Dbxref=NCBI_GP:AEF86096.1;Name=AEF86096.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86096.1;transl_table=11 CP001843.1 Genbank gene 111712 112056 . + . ID=gene107;Name=TREPR_0166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0166 CP001843.1 Genbank CDS 111712 112056 . + 0 ID=cds103;Parent=gene107;Dbxref=NCBI_GP:AEF84982.1;Name=AEF84982.1;Note=identified by match to protein family HMM PF02452;gbkey=CDS;product=ChpK;protein_id=AEF84982.1;transl_table=11 CP001843.1 Genbank gene 112092 113150 . - . ID=gene108;Name=TREPR_0165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0165 CP001843.1 Genbank CDS 112092 113150 . - 0 ID=cds104;Parent=gene108;Dbxref=NCBI_GP:AEF84198.1;Name=AEF84198.1;Note=identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329;gbkey=CDS;product=probable O-sialoglycoprotein endopeptidase (Glycoprotease);protein_id=AEF84198.1;transl_table=11 CP001843.1 Genbank gene 113131 114240 . - . ID=gene109;Name=TREPR_0164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0164 CP001843.1 Genbank CDS 113131 114240 . - 0 ID=cds105;Parent=gene109;Dbxref=NCBI_GP:AEF86928.1;Name=AEF86928.1;Note=identified by match to protein family HMM PF04748;gbkey=CDS;product=divergent polysaccharide deacetylase family;protein_id=AEF86928.1;transl_table=11 CP001843.1 Genbank gene 114534 115388 . - . ID=gene110;Name=TREPR_0163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0163 CP001843.1 Genbank CDS 114534 115388 . - 0 ID=cds106;Parent=gene110;Dbxref=NCBI_GP:AEF87001.1;Name=AEF87001.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=AEF87001.1;transl_table=11 CP001843.1 Genbank gene 115568 116983 . - . ID=gene111;Name=TREPR_0162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0162 CP001843.1 Genbank CDS 115568 116983 . - 0 ID=cds107;Parent=gene111;Dbxref=NCBI_GP:AEF86054.1;Name=AEF86054.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954;gbkey=CDS;product=sigma-54 dependent transcriptional regulator/response regulator;protein_id=AEF86054.1;transl_table=11 CP001843.1 Genbank gene 116980 118329 . - . ID=gene112;Name=TREPR_0161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0161 CP001843.1 Genbank CDS 116980 118329 . - 0 ID=cds108;Parent=gene112;Dbxref=NCBI_GP:AEF86011.1;Name=AEF86011.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=putative signal transduction histidine kinase%2C nitrogen specific%2C NtrB;protein_id=AEF86011.1;transl_table=11 CP001843.1 Genbank gene 118328 118543 . + . ID=gene113;Name=TREPR_0160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0160 CP001843.1 Genbank CDS 118328 118543 . + 0 ID=cds109;Parent=gene113;Dbxref=NCBI_GP:AEF84850.1;Name=AEF84850.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84850.1;transl_table=11 CP001843.1 Genbank gene 118677 119177 . + . ID=gene114;Name=TREPR_0159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0159 CP001843.1 Genbank CDS 118677 119177 . + 0 ID=cds110;Parent=gene114;Dbxref=NCBI_GP:AEF86248.1;Name=AEF86248.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86248.1;transl_table=11 CP001843.1 Genbank gene 119308 119856 . + . ID=gene115;Name=TREPR_0158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0158 CP001843.1 Genbank CDS 119308 119856 . + 0 ID=cds111;Parent=gene115;Dbxref=NCBI_GP:AEF86853.1;Name=AEF86853.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883;gbkey=CDS;product=transcriptional regulator%2C XRE family with cupin sensor;protein_id=AEF86853.1;transl_table=11 CP001843.1 Genbank gene 119858 121570 . + . ID=gene116;Name=TREPR_0157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0157 CP001843.1 Genbank CDS 119858 121570 . + 0 ID=cds112;Parent=gene116;Dbxref=NCBI_GP:AEF85631.1;Name=AEF85631.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=acyl-coenzyme A synthetase ACSM3;protein_id=AEF85631.1;transl_table=11 CP001843.1 Genbank gene 121577 122371 . + . ID=gene117;Name=TREPR_0156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0156 CP001843.1 Genbank CDS 121577 122371 . + 0 ID=cds113;Parent=gene117;Dbxref=NCBI_GP:AEF84448.1;Name=AEF84448.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;product=putative PHP domain protein;protein_id=AEF84448.1;transl_table=11 CP001843.1 Genbank gene 122394 123269 . - . ID=gene118;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=TREPR_0155 CP001843.1 Genbank CDS 122394 123269 . - 0 ID=cds114;Parent=gene118;Dbxref=NCBI_GP:AEF83959.1;Name=AEF83959.1;Note=identified by match to protein family HMM PF01210%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112;gbkey=CDS;gene=proC;product=pyrroline-5-carboxylate reductase;protein_id=AEF83959.1;transl_table=11 CP001843.1 Genbank gene 123347 125155 . - . ID=gene119;Name=TREPR_0154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0154 CP001843.1 Genbank CDS 123347 125155 . - 0 ID=cds115;Parent=gene119;Dbxref=NCBI_GP:AEF86729.1;Name=AEF86729.1;Note=identified by match to protein family HMM PF00004;gbkey=CDS;product=ATPase%2C AAA family;protein_id=AEF86729.1;transl_table=11 CP001843.1 Genbank gene 126054 126215 . + . ID=gene120;Name=TREPR_0151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0151 CP001843.1 Genbank CDS 126054 126215 . + 0 ID=cds116;Parent=gene120;Dbxref=NCBI_GP:AEF84660.1;Name=AEF84660.1;gbkey=CDS;product=EF-hand calcium-binding domain protein;protein_id=AEF84660.1;transl_table=11 CP001843.1 Genbank gene 126277 126486 . - . ID=gene121;Name=TREPR_0150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0150 CP001843.1 Genbank CDS 126277 126486 . - 0 ID=cds117;Parent=gene121;Dbxref=NCBI_GP:AEF83861.1;Name=AEF83861.1;gbkey=CDS;product=conserved domain protein;protein_id=AEF83861.1;transl_table=11 CP001843.1 Genbank gene 126513 127304 . - . ID=gene122;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=TREPR_0149 CP001843.1 Genbank CDS 126513 127304 . - 0 ID=cds118;Parent=gene122;Dbxref=NCBI_GP:AEF86258.1;Name=AEF86258.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR01027;gbkey=CDS;gene=proB;product=glutamate 5-kinase;protein_id=AEF86258.1;transl_table=11 CP001843.1 Genbank gene 127322 128581 . - . ID=gene123;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=TREPR_0148 CP001843.1 Genbank CDS 127322 128581 . - 0 ID=cds119;Parent=gene123;Dbxref=NCBI_GP:AEF85468.1;Name=AEF85468.1;Note=identified by match to protein family HMM TIGR00407;gbkey=CDS;gene=proA;product=glutamate-5-semialdehyde dehydrogenase;protein_id=AEF85468.1;transl_table=11 CP001843.1 Genbank gene 128593 128802 . - . ID=gene124;Name=TREPR_0147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0147 CP001843.1 Genbank CDS 128593 128802 . - 0 ID=cds120;Parent=gene124;Dbxref=NCBI_GP:AEF84876.1;Name=AEF84876.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84876.1;transl_table=11 CP001843.1 Genbank gene 128822 129499 . - . ID=gene125;Name=TREPR_0146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0146 CP001843.1 Genbank CDS 128822 129499 . - 0 ID=cds121;Parent=gene125;Dbxref=NCBI_GP:AEF84219.1;Name=AEF84219.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase;protein_id=AEF84219.1;transl_table=11 CP001843.1 Genbank gene 129514 130362 . - . ID=gene126;Name=TREPR_0145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0145 CP001843.1 Genbank CDS 129514 130362 . - 0 ID=cds122;Parent=gene126;Dbxref=NCBI_GP:AEF86939.1;Name=AEF86939.1;Note=identified by match to protein family HMM PF01612;gbkey=CDS;product=3'-5' exonuclease domain protein;protein_id=AEF86939.1;transl_table=11 CP001843.1 Genbank gene 130355 131380 . - . ID=gene127;Name=TREPR_0144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0144 CP001843.1 Genbank CDS 130355 131380 . - 0 ID=cds123;Parent=gene127;Dbxref=NCBI_GP:AEF86067.1;Name=AEF86067.1;Note=identified by match to protein family HMM PF03576;gbkey=CDS;product=peptidase family T4;protein_id=AEF86067.1;transl_table=11 CP001843.1 Genbank gene 131377 131928 . - . ID=gene128;Name=TREPR_0143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0143 CP001843.1 Genbank CDS 131377 131928 . - 0 ID=cds124;Parent=gene128;Dbxref=NCBI_GP:AEF85492.1;Name=AEF85492.1;Note=identified by match to protein family HMM PF02441;gbkey=CDS;product=coenzyme A biosynthesis bifunctional protein coaBC (DNA/pantothenatemetabolism flavoprotein);protein_id=AEF85492.1;transl_table=11 CP001843.1 Genbank gene 131925 132731 . - . ID=gene129;Name=TREPR_0142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0142 CP001843.1 Genbank CDS 131925 132731 . - 0 ID=cds125;Parent=gene129;Dbxref=NCBI_GP:AEF85115.1;Name=AEF85115.1;Note=identified by match to protein family HMM PF04127;gbkey=CDS;product=phosphopantothenoylcysteine synthetase/decarboxylase;protein_id=AEF85115.1;transl_table=11 CP001843.1 Genbank gene 132794 133870 . + . ID=gene130;Name=TREPR_0141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0141 CP001843.1 Genbank CDS 132794 133870 . + 0 ID=cds126;Parent=gene130;Dbxref=NCBI_GP:AEF85686.1;Name=AEF85686.1;Note=identified by match to protein family HMM PF01522;gbkey=CDS;product=polysaccharide deacetylase domain protein;protein_id=AEF85686.1;transl_table=11 CP001843.1 Genbank gene 134066 134575 . - . ID=gene131;Name=TREPR_0140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0140 CP001843.1 Genbank CDS 134066 134575 . - 0 ID=cds127;Parent=gene131;Dbxref=NCBI_GP:AEF84665.1;Name=AEF84665.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=N-acetyltransferase Ats1;protein_id=AEF84665.1;transl_table=11 CP001843.1 Genbank gene 134585 135640 . - . ID=gene132;Name=TREPR_0139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0139 CP001843.1 Genbank CDS 134585 135640 . - 0 ID=cds128;Parent=gene132;Dbxref=NCBI_GP:AEF86801.1;Name=AEF86801.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86801.1;transl_table=11 CP001843.1 Genbank gene 135735 136463 . - . ID=gene133;Name=TREPR_0138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0138 CP001843.1 Genbank CDS 135735 136463 . - 0 ID=cds129;Parent=gene133;Dbxref=NCBI_GP:AEF85730.1;Name=AEF85730.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85730.1;transl_table=11 CP001843.1 Genbank gene 136970 138787 . + . ID=gene134;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=TREPR_0136 CP001843.1 Genbank CDS 136970 138787 . + 0 ID=cds130;Parent=gene134;Dbxref=NCBI_GP:AEF83802.1;Name=AEF83802.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418;gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=AEF83802.1;transl_table=11 CP001843.1 Genbank gene 138802 139335 . + . ID=gene135;Name=TREPR_0135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0135 CP001843.1 Genbank CDS 138802 139335 . + 0 ID=cds131;Parent=gene135;Dbxref=NCBI_GP:AEF86534.1;Name=AEF86534.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=6%2C7-dihydropteridine reductase;protein_id=AEF86534.1;transl_table=11 CP001843.1 Genbank gene 139422 140456 . + . ID=gene136;Name=TREPR_0134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0134 CP001843.1 Genbank CDS 139422 140456 . + 0 ID=cds132;Parent=gene136;Dbxref=NCBI_GP:AEF85286.1;Name=AEF85286.1;Note=identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240;gbkey=CDS;product=D-xylulose reductase (Xylitol dehydrogenase) (XDH);protein_id=AEF85286.1;transl_table=11 CP001843.1 Genbank gene 140469 141236 . + . ID=gene137;Name=TREPR_0133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0133 CP001843.1 Genbank CDS 140469 141236 . + 0 ID=cds133;Parent=gene137;Dbxref=NCBI_GP:AEF86922.1;Name=AEF86922.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659;gbkey=CDS;product=sorbose reductase SOU1 (Sorbitol utilization proteinSOU1);protein_id=AEF86922.1;transl_table=11 CP001843.1 Genbank gene 141259 142056 . - . ID=gene138;Name=TREPR_0132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0132 CP001843.1 Genbank CDS 141259 142056 . - 0 ID=cds134;Parent=gene138;Dbxref=NCBI_GP:AEF86169.1;Name=AEF86169.1;Note=identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279;gbkey=CDS;product=transcriptional regulator%2C DeoR family;protein_id=AEF86169.1;transl_table=11 CP001843.1 Genbank gene 142246 143037 . - . ID=gene139;Name=TREPR_0131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0131 CP001843.1 Genbank CDS 142246 143037 . - 0 ID=cds135;Parent=gene139;Dbxref=NCBI_GP:AEF84568.1;Name=AEF84568.1;Note=identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279;gbkey=CDS;product=transcriptional regulator%2C DeoR family;protein_id=AEF84568.1;transl_table=11 CP001843.1 Genbank gene 143288 144526 . + . ID=gene140;Name=TREPR_0130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0130 CP001843.1 Genbank CDS 143288 144526 . + 0 ID=cds136;Parent=gene140;Dbxref=NCBI_GP:AEF85335.1;Name=AEF85335.1;Note=identified by match to protein family HMM PF00089;gbkey=CDS;product=DegP protease;protein_id=AEF85335.1;transl_table=11 CP001843.1 Genbank gene 144529 145500 . + . ID=gene141;Name=TREPR_0129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0129 CP001843.1 Genbank CDS 144529 145500 . + 0 ID=cds137;Parent=gene141;Dbxref=NCBI_GP:AEF86710.1;Name=AEF86710.1;Note=identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;product=cation efflux family protein;protein_id=AEF86710.1;transl_table=11 CP001843.1 Genbank gene 145544 145657 . - . ID=gene142;Name=TREPR_0128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0128 CP001843.1 Genbank CDS 145544 145657 . - 0 ID=cds138;Parent=gene142;Dbxref=NCBI_GP:AEF83904.1;Name=AEF83904.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83904.1;transl_table=11 CP001843.1 Genbank gene 145656 147533 . + . ID=gene143;Name=TREPR_0126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0126 CP001843.1 Genbank CDS 145656 147533 . + 0 ID=cds139;Parent=gene143;Dbxref=NCBI_GP:AEF86674.1;Name=AEF86674.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86674.1;transl_table=11 CP001843.1 Genbank gene 147662 148132 . + . ID=gene144;Name=TREPR_0125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0125 CP001843.1 Genbank CDS 147662 148132 . + 0 ID=cds140;Parent=gene144;Dbxref=NCBI_GP:AEF84327.1;Name=AEF84327.1;Note=identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=AEF84327.1;transl_table=11 CP001843.1 Genbank gene 148515 148664 . - . ID=gene145;Name=TREPR_0124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0124 CP001843.1 Genbank CDS 148515 148664 . - 0 ID=cds141;Parent=gene145;Dbxref=NCBI_GP:AEF85157.1;Name=AEF85157.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85157.1;transl_table=11 CP001843.1 Genbank gene 148846 151005 . + . ID=gene146;Name=TREPR_0123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0123 CP001843.1 Genbank CDS 148846 151005 . + 0 ID=cds142;Parent=gene146;Dbxref=NCBI_GP:AEF84691.1;Name=AEF84691.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;product=peptidase%2C U32 family;protein_id=AEF84691.1;transl_table=11 CP001843.1 Genbank gene 151136 153097 . - . ID=gene147;Name=TREPR_0122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0122 CP001843.1 Genbank CDS 151136 153097 . - 0 ID=cds143;Parent=gene147;Dbxref=NCBI_GP:AEF85285.1;Name=AEF85285.1;Note=identified by match to protein family HMM PF00092;gbkey=CDS;product=von Willebrand factor type A domain protein;protein_id=AEF85285.1;transl_table=11 CP001843.1 Genbank gene 153099 153929 . - . ID=gene148;Name=TREPR_0121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0121 CP001843.1 Genbank CDS 153099 153929 . - 0 ID=cds144;Parent=gene148;Dbxref=NCBI_GP:AEF86805.1;Name=AEF86805.1;Note=identified by match to protein family HMM PF03781;gbkey=CDS;product=serine/threonine-protein kinase Pkn1;protein_id=AEF86805.1;transl_table=11 CP001843.1 Genbank gene 154043 157774 . + . ID=gene149;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=TREPR_0120 CP001843.1 Genbank CDS 154043 157774 . + 0 ID=cds145;Parent=gene149;Dbxref=NCBI_GP:AEF83900.1;Name=AEF83900.1;Note=identified by match to protein family HMM PF00809%3B match to protein family HMM PF02310%3B match to protein family HMM PF02574%3B match to protein family HMM PF02607%3B match to protein family HMM PF02965%3B match to protein family HMM TIGR02082;gbkey=CDS;gene=metH;product=methionine synthase;protein_id=AEF83900.1;transl_table=11 CP001843.1 Genbank gene 157791 159149 . - . ID=gene150;Name=TREPR_0119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0119 CP001843.1 Genbank CDS 157791 159149 . - 0 ID=cds146;Parent=gene150;Dbxref=NCBI_GP:AEF85906.1;Name=AEF85906.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF85906.1;transl_table=11 CP001843.1 Genbank gene 159162 160430 . - . ID=gene151;Name=TREPR_0118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0118 CP001843.1 Genbank CDS 159162 160430 . - 0 ID=cds147;Parent=gene151;Dbxref=NCBI_GP:AEF85417.1;Name=AEF85417.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative substrate binding protein;protein_id=AEF85417.1;transl_table=11 CP001843.1 Genbank gene 160608 161240 . - . ID=gene152;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=TREPR_0117 CP001843.1 Genbank CDS 160608 161240 . - 0 ID=cds148;Parent=gene152;Dbxref=NCBI_GP:AEF86204.1;Name=AEF86204.1;Note=identified by match to protein family HMM PF01202;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=AEF86204.1;transl_table=11 CP001843.1 Genbank gene 161270 161932 . + . ID=gene153;Name=TREPR_0116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0116 CP001843.1 Genbank CDS 161270 161932 . + 0 ID=cds149;Parent=gene153;Dbxref=NCBI_GP:AEF84349.1;Name=AEF84349.1;gbkey=CDS;product=putative protease PrsW (Protease responsible for activating sigma-W);protein_id=AEF84349.1;transl_table=11 CP001843.1 Genbank gene 161990 162062 . + . ID=gene154;Name=TREPR_3902;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3902 CP001843.1 Genbank tRNA 161990 162062 . + . ID=rna0;Parent=gene154;gbkey=tRNA;product=tRNA-Met CP001843.1 Genbank exon 161990 162062 . + . ID=id2;Parent=rna0;gbkey=tRNA;product=tRNA-Met CP001843.1 Genbank gene 162124 163485 . - . ID=gene155;Name=TREPR_0114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0114 CP001843.1 Genbank CDS 162124 163485 . - 0 ID=cds150;Parent=gene155;Dbxref=NCBI_GP:AEF85158.1;Name=AEF85158.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85158.1;transl_table=11 CP001843.1 Genbank gene 163717 164178 . + . ID=gene156;Name=TREPR_0113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0113 CP001843.1 Genbank CDS 163717 164178 . + 0 ID=cds151;Parent=gene156;Dbxref=NCBI_GP:AEF85234.1;Name=AEF85234.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85234.1;transl_table=11 CP001843.1 Genbank gene 164175 165371 . + . ID=gene157;Name=TREPR_0112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0112 CP001843.1 Genbank CDS 164175 165371 . + 0 ID=cds152;Parent=gene157;Dbxref=NCBI_GP:AEF85365.1;Name=AEF85365.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85365.1;transl_table=11 CP001843.1 Genbank gene 165389 166105 . + . ID=gene158;Name=TREPR_0111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0111 CP001843.1 Genbank CDS 165389 166105 . + 0 ID=cds153;Parent=gene158;Dbxref=NCBI_GP:AEF85952.1;Name=AEF85952.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85952.1;transl_table=11 CP001843.1 Genbank gene 166107 166760 . + . ID=gene159;Name=TREPR_0110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0110 CP001843.1 Genbank CDS 166107 166760 . + 0 ID=cds154;Parent=gene159;Dbxref=NCBI_GP:AEF87041.1;Name=AEF87041.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF87041.1;transl_table=11 CP001843.1 Genbank gene 166771 169764 . - . ID=gene160;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=TREPR_0109 CP001843.1 Genbank CDS 166771 169764 . - 0 ID=cds155;Parent=gene160;Dbxref=NCBI_GP:AEF84048.1;Name=AEF84048.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR02168;gbkey=CDS;gene=smc;product=chromosome segregation protein SMC;protein_id=AEF84048.1;transl_table=11 CP001843.1 Genbank gene 170093 171211 . - . ID=gene161;Name=TREPR_0108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0108 CP001843.1 Genbank CDS 170093 171211 . - 0 ID=cds156;Parent=gene161;Dbxref=NCBI_GP:AEF85667.1;Name=AEF85667.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402;gbkey=CDS;product=multiple sugar-binding transport ATP-binding protein MsmK;protein_id=AEF85667.1;transl_table=11 CP001843.1 Genbank gene 171687 171941 . + . ID=gene162;Name=TREPR_0107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0107 CP001843.1 Genbank CDS 171687 171941 . + 0 ID=cds157;Parent=gene162;Dbxref=NCBI_GP:AEF83721.1;Name=AEF83721.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83721.1;transl_table=11 CP001843.1 Genbank gene 172070 172660 . + . ID=gene163;Name=TREPR_0106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0106 CP001843.1 Genbank CDS 172070 172660 . + 0 ID=cds158;Parent=gene163;Dbxref=NCBI_GP:AEF84462.1;Name=AEF84462.1;Note=identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=AEF84462.1;transl_table=11 CP001843.1 Genbank gene 172702 172893 . - . ID=gene164;Name=TREPR_0105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0105 CP001843.1 Genbank CDS 172702 172893 . - 0 ID=cds159;Parent=gene164;Dbxref=NCBI_GP:AEF86101.1;Name=AEF86101.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86101.1;transl_table=11 CP001843.1 Genbank gene 172896 173030 . - . ID=gene165;Name=TREPR_0104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0104 CP001843.1 Genbank CDS 172896 173030 . - 0 ID=cds160;Parent=gene165;Dbxref=NCBI_GP:AEF86824.1;Name=AEF86824.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86824.1;transl_table=11 CP001843.1 Genbank gene 173083 173208 . + . ID=gene166;Name=TREPR_0103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0103 CP001843.1 Genbank CDS 173083 173208 . + 0 ID=cds161;Parent=gene166;Dbxref=NCBI_GP:AEF85658.1;Name=AEF85658.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85658.1;transl_table=11 CP001843.1 Genbank gene 173378 173512 . + . ID=gene167;Name=TREPR_0102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0102 CP001843.1 Genbank CDS 173378 173512 . + 0 ID=cds162;Parent=gene167;Dbxref=NCBI_GP:AEF84438.1;Name=AEF84438.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84438.1;transl_table=11 CP001843.1 Genbank gene 173472 176051 . + . ID=gene168;Name=TREPR_0101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0101 CP001843.1 Genbank CDS 173472 176051 . + 0 ID=cds163;Parent=gene168;Dbxref=NCBI_GP:AEF84421.1;Name=AEF84421.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84421.1;transl_table=11 CP001843.1 Genbank gene 176257 176649 . + . ID=gene169;Name=TREPR_0100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0100 CP001843.1 Genbank CDS 176257 176649 . + 0 ID=cds164;Parent=gene169;Dbxref=NCBI_GP:AEF83649.1;Name=AEF83649.1;Note=identified by match to protein family HMM PF03050;gbkey=CDS;product=transposase IS66;protein_id=AEF83649.1;transl_table=11 CP001843.1 Genbank gene 176719 177555 . + . ID=gene170;Name=TREPR_0099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0099 CP001843.1 Genbank CDS 176719 177555 . + 0 ID=cds165;Parent=gene170;Dbxref=NCBI_GP:AEF86006.1;Name=AEF86006.1;Note=identified by match to protein family HMM TIGR01784;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86006.1;transl_table=11 CP001843.1 Genbank gene 177762 178364 . + . ID=gene171;Name=TREPR_0098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0098 CP001843.1 Genbank CDS 177762 178364 . + 0 ID=cds166;Parent=gene171;Dbxref=NCBI_GP:AEF85226.1;Name=AEF85226.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85226.1;transl_table=11 CP001843.1 Genbank gene 179378 180840 . + . ID=gene172;Name=rrsA;gbkey=Gene;gene=rrsA;gene_biotype=rRNA;locus_tag=TREPR_3901 CP001843.1 Genbank rRNA 179378 180840 . + . ID=rna1;Parent=gene172;gbkey=rRNA;gene=rrsA;product=16S ribosomal RNA CP001843.1 Genbank exon 179378 180840 . + . ID=id3;Parent=rna1;gbkey=rRNA;gene=rrsA;product=16S ribosomal RNA CP001843.1 Genbank gene 181046 181119 . + . ID=gene173;Name=TREPR_3900;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3900 CP001843.1 Genbank tRNA 181046 181119 . + . ID=rna2;Parent=gene173;gbkey=tRNA;product=tRNA-Ile CP001843.1 Genbank exon 181046 181119 . + . ID=id4;Parent=rna2;gbkey=tRNA;product=tRNA-Ile CP001843.1 Genbank gene 181291 184200 . + . ID=gene174;Name=rrlA;gbkey=Gene;gene=rrlA;gene_biotype=rRNA;locus_tag=TREPR_3899 CP001843.1 Genbank rRNA 181291 184200 . + . ID=rna3;Parent=gene174;gbkey=rRNA;gene=rrlA;product=23S ribosomal RNA CP001843.1 Genbank exon 181291 184200 . + . ID=id5;Parent=rna3;gbkey=rRNA;gene=rrlA;product=23S ribosomal RNA CP001843.1 Genbank gene 184388 184503 . + . ID=gene175;Name=rrfA;gbkey=Gene;gene=rrfA;gene_biotype=rRNA;locus_tag=TREPR_3898 CP001843.1 Genbank rRNA 184388 184503 . + . ID=rna4;Parent=gene175;gbkey=rRNA;gene=rrfA;product=5S ribosomal RNA CP001843.1 Genbank exon 184388 184503 . + . ID=id6;Parent=rna4;gbkey=rRNA;gene=rrfA;product=5S ribosomal RNA CP001843.1 Genbank gene 184673 184849 . - . ID=gene176;Name=TREPR_0090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0090 CP001843.1 Genbank CDS 184673 184849 . - 0 ID=cds167;Parent=gene176;Dbxref=NCBI_GP:AEF84542.1;Name=AEF84542.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84542.1;transl_table=11 CP001843.1 Genbank gene 185040 185921 . - . ID=gene177;Name=TREPR_0089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0089 CP001843.1 Genbank CDS 185040 185921 . - 0 ID=cds168;Parent=gene177;Dbxref=NCBI_GP:AEF86060.1;Name=AEF86060.1;Note=identified by match to protein family HMM PF08902;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86060.1;transl_table=11 CP001843.1 Genbank gene 185930 186817 . - . ID=gene178;Name=TREPR_0088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0088 CP001843.1 Genbank CDS 185930 186817 . - 0 ID=cds169;Parent=gene178;Dbxref=NCBI_GP:AEF85753.1;Name=AEF85753.1;Note=identified by match to protein family HMM PF03009;gbkey=CDS;product=putative phosphodiesterase;protein_id=AEF85753.1;transl_table=11 CP001843.1 Genbank gene 186842 187702 . - . ID=gene179;Name=TREPR_0087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0087 CP001843.1 Genbank CDS 186842 187702 . - 0 ID=cds170;Parent=gene179;Dbxref=NCBI_GP:AEF84228.1;Name=AEF84228.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF84228.1;transl_table=11 CP001843.1 Genbank gene 187714 188568 . - . ID=gene180;Name=TREPR_0086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0086 CP001843.1 Genbank CDS 187714 188568 . - 0 ID=cds171;Parent=gene180;Dbxref=NCBI_GP:AEF83583.1;Name=AEF83583.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=PotB protein;protein_id=AEF83583.1;transl_table=11 CP001843.1 Genbank gene 188568 189635 . - . ID=gene181;Name=TREPR_0085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0085 CP001843.1 Genbank CDS 188568 189635 . - 0 ID=cds172;Parent=gene181;Dbxref=NCBI_GP:AEF85361.1;Name=AEF85361.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF03459%3B match to protein family HMM PF08402;gbkey=CDS;product=spermidine/putrescine import ATP-binding protein PotA;protein_id=AEF85361.1;transl_table=11 CP001843.1 Genbank gene 189691 190860 . - . ID=gene182;Name=TREPR_0084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0084 CP001843.1 Genbank CDS 189691 190860 . - 0 ID=cds173;Parent=gene182;Dbxref=NCBI_GP:AEF86438.1;Name=AEF86438.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=PotD protein;protein_id=AEF86438.1;transl_table=11 CP001843.1 Genbank gene 191145 192176 . + . ID=gene183;Name=TREPR_0081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0081 CP001843.1 Genbank CDS 191145 192176 . + 0 ID=cds174;Parent=gene183;Dbxref=NCBI_GP:AEF85116.1;Name=AEF85116.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=putative periplasmic binding proteins and sugar binding domain of the LacI family;protein_id=AEF85116.1;transl_table=11 CP001843.1 Genbank gene 192242 193405 . + . ID=gene184;Name=TREPR_0079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0079 CP001843.1 Genbank CDS 192242 193405 . + 0 ID=cds175;Parent=gene184;Dbxref=NCBI_GP:AEF83690.1;Name=AEF83690.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04015;gbkey=CDS;product=iron-sulfur cluster-binding protein;protein_id=AEF83690.1;transl_table=11 CP001843.1 Genbank gene 193356 195098 . - . ID=gene185;Name=TREPR_0080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0080 CP001843.1 Genbank CDS 193356 195098 . - 0 ID=cds176;Parent=gene185;Dbxref=NCBI_GP:AEF85406.1;Name=AEF85406.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85406.1;transl_table=11 CP001843.1 Genbank gene 195135 198515 . - . ID=gene186;Name=TREPR_0078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0078 CP001843.1 Genbank CDS 195135 198515 . - 0 ID=cds177;Parent=gene186;Dbxref=NCBI_GP:AEF84408.1;Name=AEF84408.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=multi-sensor hybrid histidine kinase;protein_id=AEF84408.1;transl_table=11 CP001843.1 Genbank gene 198628 199386 . - . ID=gene187;Name=TREPR_0077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0077 CP001843.1 Genbank CDS 198628 199386 . - 0 ID=cds178;Parent=gene187;Dbxref=NCBI_GP:AEF86140.1;Name=AEF86140.1;Note=identified by match to protein family HMM PF02922;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86140.1;transl_table=11 CP001843.1 Genbank gene 199361 199507 . + . ID=gene188;Name=TREPR_0076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0076 CP001843.1 Genbank CDS 199361 199507 . + 0 ID=cds179;Parent=gene188;Dbxref=NCBI_GP:AEF86872.1;Name=AEF86872.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86872.1;transl_table=11 CP001843.1 Genbank gene 199550 203389 . + . ID=gene189;Name=TREPR_0075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0075 CP001843.1 Genbank CDS 199550 203389 . + 0 ID=cds180;Parent=gene189;Dbxref=NCBI_GP:AEF86875.1;Name=AEF86875.1;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF86875.1;transl_table=11 CP001843.1 Genbank gene 203459 203530 . + . ID=gene190;Name=TREPR_3897;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3897 CP001843.1 Genbank tRNA 203459 203530 . + . ID=rna5;Parent=gene190;gbkey=tRNA;product=tRNA-Val CP001843.1 Genbank exon 203459 203530 . + . ID=id7;Parent=rna5;gbkey=tRNA;product=tRNA-Val CP001843.1 Genbank gene 203711 204361 . + . ID=gene191;Name=cdsA_1;gbkey=Gene;gene=cdsA_1;gene_biotype=protein_coding;locus_tag=TREPR_0073 CP001843.1 Genbank CDS 203711 204361 . + 0 ID=cds181;Parent=gene191;Dbxref=NCBI_GP:AEF84009.1;Name=AEF84009.1;Note=identified by match to protein family HMM PF01148;gbkey=CDS;gene=cdsA_1;product=phosphatidate cytidylyltransferase;protein_id=AEF84009.1;transl_table=11 CP001843.1 Genbank gene 204420 205700 . + . ID=gene192;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=TREPR_0072 CP001843.1 Genbank CDS 204420 205700 . + 0 ID=cds182;Parent=gene192;Dbxref=NCBI_GP:AEF84819.1;Name=AEF84819.1;Note=identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072;gbkey=CDS;gene=murA;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=AEF84819.1;transl_table=11 CP001843.1 Genbank gene 205707 207101 . - . ID=gene193;Name=TREPR_0071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0071 CP001843.1 Genbank CDS 205707 207101 . - 0 ID=cds183;Parent=gene193;Dbxref=NCBI_GP:AEF86506.1;Name=AEF86506.1;gbkey=CDS;product=putative neutral metalloprotease;protein_id=AEF86506.1;transl_table=11 CP001843.1 Genbank gene 207176 208996 . - . ID=gene194;Name=TREPR_0070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0070 CP001843.1 Genbank CDS 207176 208996 . - 0 ID=cds184;Parent=gene194;Dbxref=NCBI_GP:AEF86560.1;Name=AEF86560.1;Note=overlaps another CDS with the same product name;gbkey=CDS;product=putative membrane protein;protein_id=AEF86560.1;transl_table=11 CP001843.1 Genbank gene 208993 209985 . - . ID=gene195;Name=TREPR_0068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0068 CP001843.1 Genbank CDS 208993 209985 . - 0 ID=cds185;Parent=gene195;Dbxref=NCBI_GP:AEF84167.1;Name=AEF84167.1;Note=overlaps another CDS with the same product name;gbkey=CDS;product=putative membrane protein;protein_id=AEF84167.1;transl_table=11 CP001843.1 Genbank gene 210340 211038 . - . ID=gene196;Name=TREPR_0066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0066 CP001843.1 Genbank CDS 210340 211038 . - 0 ID=cds186;Parent=gene196;Dbxref=NCBI_GP:AEF86142.1;Name=AEF86142.1;Note=identified by match to protein family HMM PF04012;gbkey=CDS;product=phage shock protein A%2C PspA;protein_id=AEF86142.1;transl_table=11 CP001843.1 Genbank gene 211072 211449 . - . ID=gene197;Name=TREPR_0065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0065 CP001843.1 Genbank CDS 211072 211449 . - 0 ID=cds187;Parent=gene197;Dbxref=NCBI_GP:AEF86837.1;Name=AEF86837.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86837.1;transl_table=11 CP001843.1 Genbank gene 211484 212053 . - . ID=gene198;Name=TREPR_0064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0064 CP001843.1 Genbank CDS 211484 212053 . - 0 ID=cds188;Parent=gene198;Dbxref=NCBI_GP:AEF83753.1;Name=AEF83753.1;Note=identified by match to protein family HMM PF01740%3B match to protein family HMM TIGR00377;gbkey=CDS;product=anti-anti-sigma factor;protein_id=AEF83753.1;transl_table=11 CP001843.1 Genbank gene 212279 213085 . + . ID=gene199;Name=TREPR_0062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0062 CP001843.1 Genbank CDS 212279 213085 . + 0 ID=cds189;Parent=gene199;Dbxref=NCBI_GP:AEF86167.1;Name=AEF86167.1;Note=identified by match to protein family HMM PF00588;gbkey=CDS;product=RNA methyltransferase%2C TrmH family%2C group 1;protein_id=AEF86167.1;transl_table=11 CP001843.1 Genbank gene 213066 213884 . - . ID=gene200;Name=TREPR_0063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0063 CP001843.1 Genbank CDS 213066 213884 . - 0 ID=cds190;Parent=gene200;Dbxref=NCBI_GP:AEF84733.1;Name=AEF84733.1;Note=identified by match to protein family HMM PF03808%3B match to protein family HMM TIGR00696;gbkey=CDS;product=glycosyltransferase%2C WecB/TagA/CpsF family;protein_id=AEF84733.1;transl_table=11 CP001843.1 Genbank gene 213857 214738 . - . ID=gene201;Name=TREPR_0061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0061 CP001843.1 Genbank CDS 213857 214738 . - 0 ID=cds191;Parent=gene201;Dbxref=NCBI_GP:AEF86310.1;Name=AEF86310.1;Note=identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86310.1;transl_table=11 CP001843.1 Genbank gene 214743 216260 . - . ID=gene202;Name=TREPR_0060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0060 CP001843.1 Genbank CDS 214743 216260 . - 0 ID=cds192;Parent=gene202;Dbxref=NCBI_GP:AEF84182.1;Name=AEF84182.1;Note=identified by match to protein family HMM PF00595%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225;gbkey=CDS;product=carboxyl- protease;protein_id=AEF84182.1;transl_table=11 CP001843.1 Genbank gene 216359 216958 . - . ID=gene203;Name=TREPR_0059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0059 CP001843.1 Genbank CDS 216359 216958 . - 0 ID=cds193;Parent=gene203;Dbxref=NCBI_GP:AEF84013.1;Name=AEF84013.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84013.1;transl_table=11 CP001843.1 Genbank gene 217015 217833 . + . ID=gene204;Name=TREPR_0058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0058 CP001843.1 Genbank CDS 217015 217833 . + 0 ID=cds194;Parent=gene204;Dbxref=NCBI_GP:AEF85924.1;Name=AEF85924.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;product=metallophosphoesterase;protein_id=AEF85924.1;transl_table=11 CP001843.1 Genbank gene 217865 218536 . - . ID=gene205;Name=TREPR_0057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0057 CP001843.1 Genbank CDS 217865 218536 . - 0 ID=cds195;Parent=gene205;Dbxref=NCBI_GP:AEF86683.1;Name=AEF86683.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=virginiamycin A acetyltransferase;protein_id=AEF86683.1;transl_table=11 CP001843.1 Genbank pseudogene 218541 220751 . - . ID=gene206;Name=TREPR_0056;Note=putative lipoprotein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0056;pseudo=true CP001843.1 Genbank gene 220759 221529 . - . ID=gene207;Name=TREPR_0055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0055 CP001843.1 Genbank CDS 220759 221529 . - 0 ID=cds196;Parent=gene207;Dbxref=NCBI_GP:AEF84698.1;Name=AEF84698.1;gbkey=CDS;product=metal dependent phosphohydrolase;protein_id=AEF84698.1;transl_table=11 CP001843.1 Genbank gene 221645 222757 . + . ID=gene208;Name=TREPR_0054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0054 CP001843.1 Genbank CDS 221645 222757 . + 0 ID=cds197;Parent=gene208;Dbxref=NCBI_GP:AEF84743.1;Name=AEF84743.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84743.1;transl_table=11 CP001843.1 Genbank gene 223548 225371 . - . ID=gene209;Name=TREPR_0052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0052 CP001843.1 Genbank CDS 223548 225371 . - 0 ID=cds198;Parent=gene209;Dbxref=NCBI_GP:AEF86720.1;Name=AEF86720.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=AEF86720.1;transl_table=11 CP001843.1 Genbank gene 225501 226424 . + . ID=gene210;Name=TREPR_0051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0051 CP001843.1 Genbank CDS 225501 226424 . + 0 ID=cds199;Parent=gene210;Dbxref=NCBI_GP:AEF85738.1;Name=AEF85738.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85738.1;transl_table=11 CP001843.1 Genbank gene 226519 226872 . + . ID=gene211;Name=TREPR_0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0050 CP001843.1 Genbank CDS 226519 226872 . + 0 ID=cds200;Parent=gene211;Dbxref=NCBI_GP:AEF86289.1;Name=AEF86289.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=putative DNA-binding protein;protein_id=AEF86289.1;transl_table=11 CP001843.1 Genbank gene 226881 228842 . - . ID=gene212;Name=TREPR_0049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0049 CP001843.1 Genbank CDS 226881 228842 . - 0 ID=cds201;Parent=gene212;Dbxref=NCBI_GP:AEF84994.1;Name=AEF84994.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR01241;gbkey=CDS;product=cell division protease FtsH;protein_id=AEF84994.1;transl_table=11 CP001843.1 Genbank gene 228903 229043 . - . ID=gene213;Name=TREPR_0048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0048 CP001843.1 Genbank CDS 228903 229043 . - 0 ID=cds202;Parent=gene213;Dbxref=NCBI_GP:AEF84003.1;Name=AEF84003.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84003.1;transl_table=11 CP001843.1 Genbank gene 229042 231918 . + . ID=gene214;Name=TREPR_0047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0047 CP001843.1 Genbank CDS 229042 231918 . + 0 ID=cds203;Parent=gene214;Dbxref=NCBI_GP:AEF84452.1;Name=AEF84452.1;Note=identified by match to protein family HMM PF07523;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84452.1;transl_table=11 CP001843.1 Genbank gene 231989 234967 . + . ID=gene215;Name=TREPR_0046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0046 CP001843.1 Genbank CDS 231989 234967 . + 0 ID=cds204;Parent=gene215;Dbxref=NCBI_GP:AEF83672.1;Name=AEF83672.1;gbkey=CDS;product=probable extracellular nuclease;protein_id=AEF83672.1;transl_table=11 CP001843.1 Genbank gene 234969 238925 . + . ID=gene216;Name=TREPR_0045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0045 CP001843.1 Genbank CDS 234969 238925 . + 0 ID=cds205;Parent=gene216;Dbxref=NCBI_GP:AEF86402.1;Name=AEF86402.1;Note=identified by match to protein family HMM PF02415%3B match to protein family HMM PF03781;gbkey=CDS;product=probable extracellular nuclease;protein_id=AEF86402.1;transl_table=11 CP001843.1 Genbank gene 238938 239774 . + . ID=gene217;Name=TREPR_0044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0044 CP001843.1 Genbank CDS 238938 239774 . + 0 ID=cds206;Parent=gene217;Dbxref=NCBI_GP:AEF85640.1;Name=AEF85640.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85640.1;transl_table=11 CP001843.1 Genbank gene 239774 241756 . + . ID=gene218;Name=TREPR_0043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0043 CP001843.1 Genbank CDS 239774 241756 . + 0 ID=cds207;Parent=gene218;Dbxref=NCBI_GP:AEF84002.1;Name=AEF84002.1;Note=identified by match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF84002.1;transl_table=11 CP001843.1 Genbank gene 241759 243375 . + . ID=gene219;Name=TREPR_0042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0042 CP001843.1 Genbank CDS 241759 243375 . + 0 ID=cds208;Parent=gene219;Dbxref=NCBI_GP:AEF86765.1;Name=AEF86765.1;gbkey=CDS;product=putative tetratricopeptide TPR_2 repeat protein;protein_id=AEF86765.1;transl_table=11 CP001843.1 Genbank gene 243511 244494 . + . ID=gene220;Name=TREPR_0041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0041 CP001843.1 Genbank CDS 243511 244494 . + 0 ID=cds209;Parent=gene220;Dbxref=NCBI_GP:AEF86132.1;Name=AEF86132.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86132.1;transl_table=11 CP001843.1 Genbank gene 244555 245904 . + . ID=gene221;Name=TREPR_0040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0040 CP001843.1 Genbank CDS 244555 245904 . + 0 ID=cds210;Parent=gene221;Dbxref=NCBI_GP:AEF84945.1;Name=AEF84945.1;Note=identified by match to protein family HMM PF00288;gbkey=CDS;product=galactokinase;protein_id=AEF84945.1;transl_table=11 CP001843.1 Genbank gene 245958 247148 . + . ID=gene222;Name=TREPR_0039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0039 CP001843.1 Genbank CDS 245958 247148 . + 0 ID=cds211;Parent=gene222;Dbxref=NCBI_GP:AEF85344.1;Name=AEF85344.1;Note=identified by match to protein family HMM PF00817;gbkey=CDS;product=DNA polymerase IV;protein_id=AEF85344.1;transl_table=11 CP001843.1 Genbank gene 247266 248966 . + . ID=gene223;Name=TREPR_0038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0038 CP001843.1 Genbank CDS 247266 248966 . + 0 ID=cds212;Parent=gene223;Dbxref=NCBI_GP:AEF83992.1;Name=AEF83992.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83992.1;transl_table=11 CP001843.1 Genbank gene 248979 250403 . + . ID=gene224;Name=TREPR_0037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0037 CP001843.1 Genbank CDS 248979 250403 . + 0 ID=cds213;Parent=gene224;Dbxref=NCBI_GP:AEF86960.1;Name=AEF86960.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86960.1;transl_table=11 CP001843.1 Genbank gene 250535 250608 . + . ID=gene225;Name=TREPR_3896;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3896 CP001843.1 Genbank tRNA 250535 250608 . + . ID=rna6;Parent=gene225;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank exon 250535 250608 . + . ID=id8;Parent=rna6;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank gene 250805 251935 . + . ID=gene226;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=TREPR_0035 CP001843.1 Genbank CDS 250805 251935 . + 0 ID=cds214;Parent=gene226;Dbxref=NCBI_GP:AEF85499.1;Name=AEF85499.1;Note=identified by match to protein family HMM PF01008%3B match to protein family HMM TIGR00512%3B match to protein family HMM TIGR00524;gbkey=CDS;gene=mtnA;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=AEF85499.1;transl_table=11 CP001843.1 Genbank gene 251928 252545 . + . ID=gene227;Name=TREPR_0034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0034 CP001843.1 Genbank CDS 251928 252545 . + 0 ID=cds215;Parent=gene227;Dbxref=NCBI_GP:AEF84466.1;Name=AEF84466.1;Note=identified by match to protein family HMM PF00596;gbkey=CDS;product=class II aldolase and adducin N-terminal domain protein;protein_id=AEF84466.1;transl_table=11 CP001843.1 Genbank gene 252588 253334 . + . ID=gene228;Name=mtnP;gbkey=Gene;gene=mtnP;gene_biotype=protein_coding;locus_tag=TREPR_0033 CP001843.1 Genbank CDS 252588 253334 . + 0 ID=cds216;Parent=gene228;Dbxref=NCBI_GP:AEF83607.1;Name=AEF83607.1;Note=identified by match to protein family HMM PF00896%3B match to protein family HMM TIGR01694;gbkey=CDS;gene=mtnP;product=methylthioadenosine phosphorylase;protein_id=AEF83607.1;transl_table=11 CP001843.1 Genbank gene 253546 253743 . + . ID=gene229;Name=TREPR_0032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0032 CP001843.1 Genbank CDS 253546 253743 . + 0 ID=cds217;Parent=gene229;Dbxref=NCBI_GP:AEF86333.1;Name=AEF86333.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86333.1;transl_table=11 CP001843.1 Genbank gene 253910 254401 . + . ID=gene230;Name=TREPR_0031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0031 CP001843.1 Genbank CDS 253910 254401 . + 0 ID=cds218;Parent=gene230;Dbxref=NCBI_GP:AEF85111.1;Name=AEF85111.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85111.1;transl_table=11 CP001843.1 Genbank gene 254525 255451 . + . ID=gene231;Name=TREPR_0030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0030 CP001843.1 Genbank CDS 254525 255451 . + 0 ID=cds219;Parent=gene231;Dbxref=NCBI_GP:AEF84347.1;Name=AEF84347.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84347.1;transl_table=11 CP001843.1 Genbank pseudogene 256006 256146 . + . ID=gene232;Name=TREPR_0027;Note=hypothetical protein%3B this region contains one or more premature stops and/or frameshifts%3Bidentified by glimmer%3B putative;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0027;pseudo=true CP001843.1 Genbank pseudogene 256307 256543 . + . ID=gene233;Name=TREPR_0026;Note=putative pyruvate-formate lyase%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0026;pseudo=true CP001843.1 Genbank gene 256579 256734 . + . ID=gene234;Name=TREPR_0025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0025 CP001843.1 Genbank CDS 256579 256734 . + 0 ID=cds220;Parent=gene234;Dbxref=NCBI_GP:AEF86085.1;Name=AEF86085.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86085.1;transl_table=11 CP001843.1 Genbank gene 256792 258108 . + . ID=gene235;Name=TREPR_0024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0024 CP001843.1 Genbank CDS 256792 258108 . + 0 ID=cds221;Parent=gene235;Dbxref=NCBI_GP:AEF86646.1;Name=AEF86646.1;gbkey=CDS;product=putative O-unit flippase;protein_id=AEF86646.1;transl_table=11 CP001843.1 Genbank gene 258381 259094 . + . ID=gene236;Name=TREPR_0022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0022 CP001843.1 Genbank CDS 258381 259094 . + 0 ID=cds222;Parent=gene236;Dbxref=NCBI_GP:AEF83699.1;Name=AEF83699.1;gbkey=CDS;product=glycosyltransferase sugar-binding region DXD domain protein;protein_id=AEF83699.1;transl_table=11 CP001843.1 Genbank gene 259142 259918 . + . ID=gene237;Name=TREPR_0021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0021 CP001843.1 Genbank CDS 259142 259918 . + 0 ID=cds223;Parent=gene237;Dbxref=NCBI_GP:AEF84277.1;Name=AEF84277.1;Note=identified by match to protein family HMM PF04488;gbkey=CDS;product=glycosyltransferase family 32;protein_id=AEF84277.1;transl_table=11 CP001843.1 Genbank gene 259942 260937 . + . ID=gene238;Name=TREPR_0020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0020 CP001843.1 Genbank CDS 259942 260937 . + 0 ID=cds224;Parent=gene238;Dbxref=NCBI_GP:AEF85216.1;Name=AEF85216.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase;protein_id=AEF85216.1;transl_table=11 CP001843.1 Genbank gene 260934 261893 . + . ID=gene239;Name=TREPR_0019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0019 CP001843.1 Genbank CDS 260934 261893 . + 0 ID=cds225;Parent=gene239;Dbxref=NCBI_GP:AEF86766.1;Name=AEF86766.1;Note=identified by match to protein family HMM PF01040;gbkey=CDS;product=prenyltransferase%2C UbiA family;protein_id=AEF86766.1;transl_table=11 CP001843.1 Genbank gene 261890 262258 . + . ID=gene240;Name=TREPR_0018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0018 CP001843.1 Genbank CDS 261890 262258 . + 0 ID=cds226;Parent=gene240;Dbxref=NCBI_GP:AEF85006.1;Name=AEF85006.1;gbkey=CDS;product=transporter;protein_id=AEF85006.1;transl_table=11 CP001843.1 Genbank gene 262264 262938 . + . ID=gene241;Name=TREPR_0017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0017 CP001843.1 Genbank CDS 262264 262938 . + 0 ID=cds227;Parent=gene241;Dbxref=NCBI_GP:AEF85950.1;Name=AEF85950.1;Note=identified by match to protein family HMM PF00702;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85950.1;transl_table=11 CP001843.1 Genbank gene 262987 263124 . + . ID=gene242;Name=TREPR_0016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0016 CP001843.1 Genbank CDS 262987 263124 . + 0 ID=cds228;Parent=gene242;Dbxref=NCBI_GP:AEF87027.1;Name=AEF87027.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF87027.1;transl_table=11 CP001843.1 Genbank gene 263087 263563 . + . ID=gene243;Name=TREPR_0015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0015 CP001843.1 Genbank CDS 263087 263563 . + 0 ID=cds229;Parent=gene243;Dbxref=NCBI_GP:AEF83534.1;Name=AEF83534.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83534.1;transl_table=11 CP001843.1 Genbank gene 263560 264981 . + . ID=gene244;Name=TREPR_0014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0014 CP001843.1 Genbank CDS 263560 264981 . + 0 ID=cds230;Parent=gene244;Dbxref=NCBI_GP:AEF84535.1;Name=AEF84535.1;Note=overlaps another CDS with the same product name;gbkey=CDS;product=putative membrane protein;protein_id=AEF84535.1;transl_table=11 CP001843.1 Genbank gene 264981 266288 . + . ID=gene245;Name=TREPR_0013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0013 CP001843.1 Genbank CDS 264981 266288 . + 0 ID=cds231;Parent=gene245;Dbxref=NCBI_GP:AEF83710.1;Name=AEF83710.1;Note=overlaps another CDS with the same product name;gbkey=CDS;product=putative membrane protein;protein_id=AEF83710.1;transl_table=11 CP001843.1 Genbank gene 266358 267467 . + . ID=gene246;Name=TREPR_0012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0012 CP001843.1 Genbank CDS 266358 267467 . + 0 ID=cds232;Parent=gene246;Dbxref=NCBI_GP:AEF84492.1;Name=AEF84492.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=capsular polysaccharide biosynthesis protein;protein_id=AEF84492.1;transl_table=11 CP001843.1 Genbank gene 267581 268276 . + . ID=gene247;Name=TREPR_0011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0011 CP001843.1 Genbank CDS 267581 268276 . + 0 ID=cds233;Parent=gene247;Dbxref=NCBI_GP:AEF85675.1;Name=AEF85675.1;gbkey=CDS;product=O-methyltransferase;protein_id=AEF85675.1;transl_table=11 CP001843.1 Genbank gene 268298 269365 . + . ID=gene248;Name=TREPR_0010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0010 CP001843.1 Genbank CDS 268298 269365 . + 0 ID=cds234;Parent=gene248;Dbxref=NCBI_GP:AEF86455.1;Name=AEF86455.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycosyltransferase%2C group 1 family;protein_id=AEF86455.1;transl_table=11 CP001843.1 Genbank gene 269679 270644 . + . ID=gene249;Name=TREPR_0009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0009 CP001843.1 Genbank CDS 269679 270644 . + 0 ID=cds235;Parent=gene249;Dbxref=NCBI_GP:AEF85131.1;Name=AEF85131.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=dTDP-rhamnosyl transferase RfbG;protein_id=AEF85131.1;transl_table=11 CP001843.1 Genbank gene 270687 271607 . + . ID=gene250;Name=TREPR_0008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0008 CP001843.1 Genbank CDS 270687 271607 . + 0 ID=cds236;Parent=gene250;Dbxref=NCBI_GP:AEF86728.1;Name=AEF86728.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;product=NAD-dependent epimerase/dehydratase;protein_id=AEF86728.1;transl_table=11 CP001843.1 Genbank gene 271604 272269 . + . ID=gene251;Name=TREPR_0007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0007 CP001843.1 Genbank CDS 271604 272269 . + 0 ID=cds237;Parent=gene251;Dbxref=NCBI_GP:AEF85240.1;Name=AEF85240.1;Note=identified by match to protein family HMM PF02397;gbkey=CDS;product=sugar transferase;protein_id=AEF85240.1;transl_table=11 CP001843.1 Genbank gene 272286 273476 . + . ID=gene252;Name=TREPR_0006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0006 CP001843.1 Genbank CDS 272286 273476 . + 0 ID=cds238;Parent=gene252;Dbxref=NCBI_GP:AEF86024.1;Name=AEF86024.1;Note=identified by match to protein family HMM PF02719;gbkey=CDS;product=polysaccharide biosynthesis protein CapD;protein_id=AEF86024.1;transl_table=11 CP001843.1 Genbank gene 273488 274492 . + . ID=gene253;Name=TREPR_0005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0005 CP001843.1 Genbank CDS 273488 274492 . + 0 ID=cds239;Parent=gene253;Dbxref=NCBI_GP:AEF86776.1;Name=AEF86776.1;Note=identified by match to protein family HMM PF02706;gbkey=CDS;product=putative lipopolysaccharide biosynthesis;protein_id=AEF86776.1;transl_table=11 CP001843.1 Genbank gene 274489 275949 . + . ID=gene254;Name=TREPR_0004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0004 CP001843.1 Genbank CDS 274489 275949 . + 0 ID=cds240;Parent=gene254;Dbxref=NCBI_GP:AEF83894.1;Name=AEF83894.1;gbkey=CDS;product=putative polysaccharide biosynthesis/export domain protein;protein_id=AEF83894.1;transl_table=11 CP001843.1 Genbank gene 275985 277424 . + . ID=gene255;Name=TREPR_0003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0003 CP001843.1 Genbank CDS 275985 277424 . + 0 ID=cds241;Parent=gene255;Dbxref=NCBI_GP:AEF83919.1;Name=AEF83919.1;Note=identified by match to protein family HMM PF03062;gbkey=CDS;product=probable poly(beta-D-mannuronate) O-acetylase (Alginatebiosynthesis protein AlgI);protein_id=AEF83919.1;transl_table=11 CP001843.1 Genbank gene 277433 278572 . + . ID=gene256;Name=TREPR_0002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0002 CP001843.1 Genbank CDS 277433 278572 . + 0 ID=cds242;Parent=gene256;Dbxref=NCBI_GP:AEF85739.1;Name=AEF85739.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85739.1;transl_table=11 CP001843.1 Genbank gene 278654 279871 . + . ID=gene257;Name=TREPR_0001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0001 CP001843.1 Genbank CDS 278654 279871 . + 0 ID=cds243;Parent=gene257;Dbxref=NCBI_GP:AEF84286.1;Name=AEF84286.1;Note=identified by match to protein family HMM PF01757;gbkey=CDS;product=putative O-acyltransferase;protein_id=AEF84286.1;transl_table=11 CP001843.1 Genbank gene 279937 280194 . + . ID=gene258;Name=TREPR_3895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3895 CP001843.1 Genbank CDS 279937 280194 . + 0 ID=cds244;Parent=gene258;Dbxref=NCBI_GP:AEF85380.1;Name=AEF85380.1;gbkey=CDS;product=peptidase S45%2C penicillin amidase;protein_id=AEF85380.1;transl_table=11 CP001843.1 Genbank gene 280335 280466 . + . ID=gene259;Name=TREPR_3893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3893 CP001843.1 Genbank CDS 280335 280466 . + 0 ID=cds245;Parent=gene259;Dbxref=NCBI_GP:AEF86383.1;Name=AEF86383.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86383.1;transl_table=11 CP001843.1 Genbank gene 280502 281740 . - . ID=gene260;Name=TREPR_3892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3892 CP001843.1 Genbank CDS 280502 281740 . - 0 ID=cds246;Parent=gene260;Dbxref=NCBI_GP:AEF85875.1;Name=AEF85875.1;Note=identified by match to protein family HMM PF00665;gbkey=CDS;product=integrase domain protein;protein_id=AEF85875.1;transl_table=11 CP001843.1 Genbank gene 281354 281806 . + . ID=gene261;Name=TREPR_3891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3891 CP001843.1 Genbank CDS 281354 281806 . + 0 ID=cds247;Parent=gene261;Dbxref=NCBI_GP:AEF85250.1;Name=AEF85250.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85250.1;transl_table=11 CP001843.1 Genbank gene 281910 283160 . - . ID=gene262;Name=TREPR_3890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3890 CP001843.1 Genbank CDS 281910 283160 . - 0 ID=cds248;Parent=gene262;Dbxref=NCBI_GP:AEF83803.1;Name=AEF83803.1;Note=identified by match to protein family HMM PF00665;gbkey=CDS;product=integrase domain protein;protein_id=AEF83803.1;transl_table=11 CP001843.1 Genbank gene 283286 284350 . + . ID=gene263;Name=TREPR_3889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3889 CP001843.1 Genbank CDS 283286 284350 . + 0 ID=cds249;Parent=gene263;Dbxref=NCBI_GP:AEF85764.1;Name=AEF85764.1;Note=identified by match to protein family HMM PF01757;gbkey=CDS;product=acyltransferase 3;protein_id=AEF85764.1;transl_table=11 CP001843.1 Genbank pseudogene 284522 285469 . - . ID=gene264;Name=TREPR_3888;Note=transposase%2C IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01609;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3888;pseudo=true CP001843.1 Genbank pseudogene 285433 286065 . - . ID=gene265;Name=TREPR_3887;Note=transposase IS4 family%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3887;pseudo=true CP001843.1 Genbank gene 286261 287352 . - . ID=gene266;Name=TREPR_3886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3886 CP001843.1 Genbank CDS 286261 287352 . - 0 ID=cds250;Parent=gene266;Dbxref=NCBI_GP:AEF86743.1;Name=AEF86743.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86743.1;transl_table=11 CP001843.1 Genbank gene 287603 287728 . - . ID=gene267;Name=TREPR_3885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3885 CP001843.1 Genbank CDS 287603 287728 . - 0 ID=cds251;Parent=gene267;Dbxref=NCBI_GP:AEF85759.1;Name=AEF85759.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85759.1;transl_table=11 CP001843.1 Genbank gene 287708 287842 . + . ID=gene268;Name=TREPR_3884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3884 CP001843.1 Genbank CDS 287708 287842 . + 0 ID=cds252;Parent=gene268;Dbxref=NCBI_GP:AEF83909.1;Name=AEF83909.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83909.1;transl_table=11 CP001843.1 Genbank gene 288040 288423 . + . ID=gene269;Name=TREPR_3883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3883 CP001843.1 Genbank CDS 288040 288423 . + 0 ID=cds253;Parent=gene269;Dbxref=NCBI_GP:AEF86480.1;Name=AEF86480.1;gbkey=CDS;product=O-methyltransferase;protein_id=AEF86480.1;transl_table=11 CP001843.1 Genbank gene 288893 289786 . - . ID=gene270;Name=TREPR_3882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3882 CP001843.1 Genbank CDS 288893 289786 . - 0 ID=cds254;Parent=gene270;Dbxref=NCBI_GP:AEF85318.1;Name=AEF85318.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=putative membrane protein;protein_id=AEF85318.1;transl_table=11 CP001843.1 Genbank gene 289857 291578 . + . ID=gene271;Name=TREPR_3881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3881 CP001843.1 Genbank CDS 289857 291578 . + 0 ID=cds255;Parent=gene271;Dbxref=NCBI_GP:AEF85214.1;Name=AEF85214.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF85214.1;transl_table=11 CP001843.1 Genbank gene 291840 292043 . + . ID=gene272;Name=TREPR_3880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3880 CP001843.1 Genbank CDS 291840 292043 . + 0 ID=cds256;Parent=gene272;Dbxref=NCBI_GP:AEF84211.1;Name=AEF84211.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84211.1;transl_table=11 CP001843.1 Genbank gene 292040 292213 . + . ID=gene273;Name=TREPR_3879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3879 CP001843.1 Genbank CDS 292040 292213 . + 0 ID=cds257;Parent=gene273;Dbxref=NCBI_GP:AEF86654.1;Name=AEF86654.1;gbkey=CDS;product=conserved domain protein;protein_id=AEF86654.1;transl_table=11 CP001843.1 Genbank gene 292452 293852 . + . ID=gene274;Name=TREPR_3878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3878 CP001843.1 Genbank CDS 292452 293852 . + 0 ID=cds258;Parent=gene274;Dbxref=NCBI_GP:AEF85841.1;Name=AEF85841.1;Note=identified by match to protein family HMM PF00654;gbkey=CDS;product=Cl- channel%2C voltage-gated family protein;protein_id=AEF85841.1;transl_table=11 CP001843.1 Genbank gene 293827 296409 . + . ID=gene275;Name=TREPR_3877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3877 CP001843.1 Genbank CDS 293827 296409 . + 0 ID=cds259;Parent=gene275;Dbxref=NCBI_GP:AEF84293.1;Name=AEF84293.1;Note=identified by match to protein family HMM PF00136%3B match to protein family HMM PF03104;gbkey=CDS;product=DNA polymerase II;protein_id=AEF84293.1;transl_table=11 CP001843.1 Genbank gene 296534 298072 . - . ID=gene276;Name=TREPR_3876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3876 CP001843.1 Genbank CDS 296534 298072 . - 0 ID=cds260;Parent=gene276;Dbxref=NCBI_GP:AEF85469.1;Name=AEF85469.1;Note=identified by match to protein family HMM PF00614;gbkey=CDS;product=cardiolipin synthetase;protein_id=AEF85469.1;transl_table=11 CP001843.1 Genbank gene 298128 298985 . - . ID=gene277;Name=TREPR_3875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3875 CP001843.1 Genbank CDS 298128 298985 . - 0 ID=cds261;Parent=gene277;Dbxref=NCBI_GP:AEF86453.1;Name=AEF86453.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase%2C GNAT family;protein_id=AEF86453.1;transl_table=11 CP001843.1 Genbank gene 298989 300680 . - . ID=gene278;Name=TREPR_3874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3874 CP001843.1 Genbank CDS 298989 300680 . - 0 ID=cds262;Parent=gene278;Dbxref=NCBI_GP:AEF83887.1;Name=AEF83887.1;Note=identified by match to protein family HMM PF00933;gbkey=CDS;product=glycosyl hydrolase%2C family 3;protein_id=AEF83887.1;transl_table=11 CP001843.1 Genbank gene 300696 300818 . - . ID=gene279;Name=TREPR_3873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3873 CP001843.1 Genbank CDS 300696 300818 . - 0 ID=cds263;Parent=gene279;Dbxref=NCBI_GP:AEF84821.1;Name=AEF84821.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84821.1;transl_table=11 CP001843.1 Genbank gene 300859 301884 . + . ID=gene280;Name=TREPR_3872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3872 CP001843.1 Genbank CDS 300859 301884 . + 0 ID=cds264;Parent=gene280;Dbxref=NCBI_GP:AEF86029.1;Name=AEF86029.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86029.1;transl_table=11 CP001843.1 Genbank gene 301963 302286 . + . ID=gene281;Name=TREPR_3871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3871 CP001843.1 Genbank CDS 301963 302286 . + 0 ID=cds265;Parent=gene281;Dbxref=NCBI_GP:AEF86988.1;Name=AEF86988.1;Note=identified by match to protein family HMM PF01909;gbkey=CDS;product=DNA polymerase%2C beta domain protein region;protein_id=AEF86988.1;transl_table=11 CP001843.1 Genbank gene 302279 302677 . + . ID=gene282;Name=TREPR_3870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3870 CP001843.1 Genbank CDS 302279 302677 . + 0 ID=cds266;Parent=gene282;Dbxref=NCBI_GP:AEF83867.1;Name=AEF83867.1;Note=identified by match to protein family HMM PF05168;gbkey=CDS;product=HepN domain protein;protein_id=AEF83867.1;transl_table=11 CP001843.1 Genbank gene 303217 303810 . + . ID=gene283;Name=TREPR_3868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3868 CP001843.1 Genbank CDS 303217 303810 . + 0 ID=cds267;Parent=gene283;Dbxref=NCBI_GP:AEF85483.1;Name=AEF85483.1;Note=identified by match to protein family HMM PF00929;gbkey=CDS;product=putative exonuclease;protein_id=AEF85483.1;transl_table=11 CP001843.1 Genbank gene 303857 304531 . + . ID=gene284;Name=TREPR_3867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3867 CP001843.1 Genbank CDS 303857 304531 . + 0 ID=cds268;Parent=gene284;Dbxref=NCBI_GP:AEF85684.1;Name=AEF85684.1;Note=identified by match to protein family HMM PF03372;gbkey=CDS;product=endonuclease/exonuclease/phosphatase family protein;protein_id=AEF85684.1;transl_table=11 CP001843.1 Genbank gene 304723 306756 . + . ID=gene285;Name=TREPR_3866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3866 CP001843.1 Genbank CDS 304723 306756 . + 0 ID=cds269;Parent=gene285;Dbxref=NCBI_GP:AEF86440.1;Name=AEF86440.1;Note=identified by match to protein family HMM PF00771;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=AEF86440.1;transl_table=11 CP001843.1 Genbank gene 306802 307545 . + . ID=gene286;Name=TREPR_3865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3865 CP001843.1 Genbank CDS 306802 307545 . + 0 ID=cds270;Parent=gene286;Dbxref=NCBI_GP:AEF85065.1;Name=AEF85065.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85065.1;transl_table=11 CP001843.1 Genbank gene 307631 308413 . + . ID=gene287;Name=TREPR_3864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3864 CP001843.1 Genbank CDS 307631 308413 . + 0 ID=cds271;Parent=gene287;Dbxref=NCBI_GP:AEF86127.1;Name=AEF86127.1;Note=identified by match to protein family HMM PF03372;gbkey=CDS;product=endonuclease/exonuclease/phosphatase family protein;protein_id=AEF86127.1;transl_table=11 CP001843.1 Genbank gene 308572 309924 . + . ID=gene288;Name=TREPR_3863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3863 CP001843.1 Genbank CDS 308572 309924 . + 0 ID=cds272;Parent=gene288;Dbxref=NCBI_GP:AEF86272.1;Name=AEF86272.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF86272.1;transl_table=11 CP001843.1 Genbank pseudogene 309934 310896 . + . ID=gene289;Name=TREPR_3862;Note=tetratricopeptide repeat protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3862;pseudo=true CP001843.1 Genbank gene 311107 312696 . + . ID=gene290;Name=TREPR_3861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3861 CP001843.1 Genbank CDS 311107 312696 . + 0 ID=cds273;Parent=gene290;Dbxref=NCBI_GP:AEF84723.1;Name=AEF84723.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF84723.1;transl_table=11 CP001843.1 Genbank gene 312812 313357 . + . ID=gene291;Name=TREPR_3860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3860 CP001843.1 Genbank CDS 312812 313357 . + 0 ID=cds274;Parent=gene291;Dbxref=NCBI_GP:AEF86133.1;Name=AEF86133.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86133.1;transl_table=11 CP001843.1 Genbank gene 313490 314581 . + . ID=gene292;Name=TREPR_3859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3859 CP001843.1 Genbank CDS 313490 314581 . + 0 ID=cds275;Parent=gene292;Dbxref=NCBI_GP:AEF86870.1;Name=AEF86870.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF86870.1;transl_table=11 CP001843.1 Genbank gene 314625 315551 . - . ID=gene293;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=TREPR_3858 CP001843.1 Genbank CDS 314625 315551 . - 0 ID=cds276;Parent=gene293;Dbxref=NCBI_GP:AEF84115.1;Name=AEF84115.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF01266%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01292;gbkey=CDS;gene=trxB;product=thioredoxin-disulfide reductase;protein_id=AEF84115.1;transl_table=11 CP001843.1 Genbank gene 315642 317126 . + . ID=gene294;Name=TREPR_3857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3857 CP001843.1 Genbank CDS 315642 317126 . + 0 ID=cds277;Parent=gene294;Dbxref=NCBI_GP:AEF83612.1;Name=AEF83612.1;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF83612.1;transl_table=11 CP001843.1 Genbank gene 317376 318287 . - . ID=gene295;Name=TREPR_3856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3856 CP001843.1 Genbank CDS 317376 318287 . - 0 ID=cds278;Parent=gene295;Dbxref=NCBI_GP:AEF86345.1;Name=AEF86345.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86345.1;transl_table=11 CP001843.1 Genbank gene 318432 318941 . - . ID=gene296;Name=TREPR_3855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3855 CP001843.1 Genbank CDS 318432 318941 . - 0 ID=cds279;Parent=gene296;Dbxref=NCBI_GP:AEF85140.1;Name=AEF85140.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85140.1;transl_table=11 CP001843.1 Genbank gene 319024 321189 . - . ID=gene297;Name=TREPR_3854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3854 CP001843.1 Genbank CDS 319024 321189 . - 0 ID=cds280;Parent=gene297;Dbxref=NCBI_GP:AEF84367.1;Name=AEF84367.1;gbkey=CDS;product=cell surface protein;protein_id=AEF84367.1;transl_table=11 CP001843.1 Genbank gene 321299 321640 . + . ID=gene298;Name=TREPR_3853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3853 CP001843.1 Genbank CDS 321299 321640 . + 0 ID=cds281;Parent=gene298;Dbxref=NCBI_GP:AEF86859.1;Name=AEF86859.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=DNA-binding protein;protein_id=AEF86859.1;transl_table=11 CP001843.1 Genbank gene 321649 321822 . - . ID=gene299;Name=TREPR_3852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3852 CP001843.1 Genbank CDS 321649 321822 . - 0 ID=cds282;Parent=gene299;Dbxref=NCBI_GP:AEF85843.1;Name=AEF85843.1;Note=identified by match to protein family HMM PF07927;gbkey=CDS;product=conserved domain protein;protein_id=AEF85843.1;transl_table=11 CP001843.1 Genbank gene 321819 322010 . - . ID=gene300;Name=TREPR_3851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3851 CP001843.1 Genbank CDS 321819 322010 . - 0 ID=cds283;Parent=gene300;Dbxref=NCBI_GP:AEF84799.1;Name=AEF84799.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84799.1;transl_table=11 CP001843.1 Genbank gene 322141 322983 . + . ID=gene301;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=TREPR_3849 CP001843.1 Genbank CDS 322141 322983 . + 0 ID=cds284;Parent=gene301;Dbxref=NCBI_GP:AEF84193.1;Name=AEF84193.1;Note=identified by match to protein family HMM PF02511%3B match to protein family HMM TIGR02170;gbkey=CDS;gene=thyX;product=thymidylate synthase%2C flavin-dependent;protein_id=AEF84193.1;transl_table=11 CP001843.1 Genbank gene 323005 323916 . + . ID=gene302;Name=TREPR_3848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3848 CP001843.1 Genbank CDS 323005 323916 . + 0 ID=cds285;Parent=gene302;Dbxref=NCBI_GP:AEF85180.1;Name=AEF85180.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85180.1;transl_table=11 CP001843.1 Genbank gene 323916 325046 . + . ID=gene303;Name=TREPR_3846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3846 CP001843.1 Genbank CDS 323916 325046 . + 0 ID=cds286;Parent=gene303;Dbxref=NCBI_GP:AEF84335.1;Name=AEF84335.1;gbkey=CDS;product=MdsC protein;protein_id=AEF84335.1;transl_table=11 CP001843.1 Genbank gene 325023 325166 . - . ID=gene304;Name=TREPR_3847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3847 CP001843.1 Genbank CDS 325023 325166 . - 0 ID=cds287;Parent=gene304;Dbxref=NCBI_GP:AEF84714.1;Name=AEF84714.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84714.1;transl_table=11 CP001843.1 Genbank gene 325129 326397 . + . ID=gene305;Name=TREPR_3845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3845 CP001843.1 Genbank CDS 325129 326397 . + 0 ID=cds288;Parent=gene305;Dbxref=NCBI_GP:AEF86677.1;Name=AEF86677.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative sugar ABC-transporter%2C sugar-binding protein;protein_id=AEF86677.1;transl_table=11 CP001843.1 Genbank gene 326470 327381 . + . ID=gene306;Name=TREPR_3844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3844 CP001843.1 Genbank CDS 326470 327381 . + 0 ID=cds289;Parent=gene306;Dbxref=NCBI_GP:AEF86284.1;Name=AEF86284.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF86284.1;transl_table=11 CP001843.1 Genbank gene 327391 328242 . + . ID=gene307;Name=TREPR_3843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3843 CP001843.1 Genbank CDS 327391 328242 . + 0 ID=cds290;Parent=gene307;Dbxref=NCBI_GP:AEF85552.1;Name=AEF85552.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF85552.1;transl_table=11 CP001843.1 Genbank gene 328245 330521 . + . ID=gene308;Name=TREPR_3842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3842 CP001843.1 Genbank CDS 328245 330521 . + 0 ID=cds291;Parent=gene308;Dbxref=NCBI_GP:AEF84523.1;Name=AEF84523.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84523.1;transl_table=11 CP001843.1 Genbank gene 330595 331656 . - . ID=gene309;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=TREPR_3841 CP001843.1 Genbank CDS 330595 331656 . - 0 ID=cds292;Parent=gene309;Dbxref=NCBI_GP:AEF83613.1;Name=AEF83613.1;Note=identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544;gbkey=CDS;gene=lgt;product=prolipoprotein diacylglyceryl transferase;protein_id=AEF83613.1;transl_table=11 CP001843.1 Genbank binding_site 331856 331952 . + . ID=id9;Note=Glycine riboswitch%3B Rfam score 53.71;bound_moiety=glycine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00504 CP001843.1 Genbank binding_site 331948 332051 . + . ID=id10;Note=Glycine riboswitch%3B Rfam score 30.96;bound_moiety=glycine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00504 CP001843.1 Genbank gene 332132 333217 . + . ID=gene310;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=TREPR_3840 CP001843.1 Genbank CDS 332132 333217 . + 0 ID=cds293;Parent=gene310;Dbxref=NCBI_GP:AEF85174.1;Name=AEF85174.1;Note=identified by match to protein family HMM PF01571%3B match to protein family HMM PF08669%3B match to protein family HMM TIGR00528;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=AEF85174.1;transl_table=11 CP001843.1 Genbank gene 333242 333613 . + . ID=gene311;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=TREPR_3839 CP001843.1 Genbank CDS 333242 333613 . + 0 ID=cds294;Parent=gene311;Dbxref=NCBI_GP:AEF83956.1;Name=AEF83956.1;Note=identified by match to protein family HMM PF01597%3B match to protein family HMM TIGR00527;gbkey=CDS;gene=gcvH;product=glycine cleavage system H protein;protein_id=AEF83956.1;transl_table=11 CP001843.1 Genbank gene 333624 334973 . + . ID=gene312;Name=TREPR_3838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3838 CP001843.1 Genbank CDS 333624 334973 . + 0 ID=cds295;Parent=gene312;Dbxref=NCBI_GP:AEF86275.1;Name=AEF86275.1;Note=identified by match to protein family HMM PF02347%3B overlaps another CDS with the same product name;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=AEF86275.1;transl_table=11 CP001843.1 Genbank gene 334970 336403 . + . ID=gene313;Name=TREPR_3837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3837 CP001843.1 Genbank CDS 334970 336403 . + 0 ID=cds296;Parent=gene313;Dbxref=NCBI_GP:AEF85683.1;Name=AEF85683.1;Note=identified by match to protein family HMM PF01212%3B match to protein family HMM PF02347%3B overlaps another CDS with the same product name;gbkey=CDS;product=glycine dehydrogenase (decarboxylating);protein_id=AEF85683.1;transl_table=11 CP001843.1 Genbank gene 336414 337442 . + . ID=gene314;Name=TREPR_3836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3836 CP001843.1 Genbank CDS 336414 337442 . + 0 ID=cds297;Parent=gene314;Dbxref=NCBI_GP:AEF86441.1;Name=AEF86441.1;Note=identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545;gbkey=CDS;product=lipoate-protein ligase A (Lipoate--protein ligase);protein_id=AEF86441.1;transl_table=11 CP001843.1 Genbank gene 337465 338970 . + . ID=gene315;Name=TREPR_3835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3835 CP001843.1 Genbank CDS 337465 338970 . + 0 ID=cds298;Parent=gene315;Dbxref=NCBI_GP:AEF86761.1;Name=AEF86761.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;product=dihydrolipoyl dehydrogenase;protein_id=AEF86761.1;transl_table=11 CP001843.1 Genbank gene 339034 339756 . + . ID=gene316;Name=TREPR_3834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3834 CP001843.1 Genbank CDS 339034 339756 . + 0 ID=cds299;Parent=gene316;Dbxref=NCBI_GP:AEF83985.1;Name=AEF83985.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF83985.1;transl_table=11 CP001843.1 Genbank gene 339771 340451 . + . ID=gene317;Name=TREPR_3833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3833 CP001843.1 Genbank CDS 339771 340451 . + 0 ID=cds300;Parent=gene317;Dbxref=NCBI_GP:AEF85168.1;Name=AEF85168.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF85168.1;transl_table=11 CP001843.1 Genbank gene 340448 341800 . + . ID=gene318;Name=TREPR_3832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3832 CP001843.1 Genbank CDS 340448 341800 . + 0 ID=cds301;Parent=gene318;Dbxref=NCBI_GP:AEF85283.1;Name=AEF85283.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;product=amidohydrolase;protein_id=AEF85283.1;transl_table=11 CP001843.1 Genbank gene 341995 342807 . + . ID=gene319;Name=TREPR_3830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3830 CP001843.1 Genbank CDS 341995 342807 . + 0 ID=cds302;Parent=gene319;Dbxref=NCBI_GP:AEF85704.1;Name=AEF85704.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=4Fe-4S ferredoxin iron-sulfur binding domain protein;protein_id=AEF85704.1;transl_table=11 CP001843.1 Genbank gene 342943 344082 . - . ID=gene320;Name=TREPR_3829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3829 CP001843.1 Genbank CDS 342943 344082 . - 0 ID=cds303;Parent=gene320;Dbxref=NCBI_GP:AEF86468.1;Name=AEF86468.1;gbkey=CDS;product=ATP-binding protein;protein_id=AEF86468.1;transl_table=11 CP001843.1 Genbank gene 344073 344624 . - . ID=gene321;Name=TREPR_3828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3828 CP001843.1 Genbank CDS 344073 344624 . - 0 ID=cds304;Parent=gene321;Dbxref=NCBI_GP:AEF86839.1;Name=AEF86839.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86839.1;transl_table=11 CP001843.1 Genbank gene 344739 344897 . - . ID=gene322;Name=TREPR_3827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3827 CP001843.1 Genbank CDS 344739 344897 . - 0 ID=cds305;Parent=gene322;Dbxref=NCBI_GP:AEF83790.1;Name=AEF83790.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83790.1;transl_table=11 CP001843.1 Genbank gene 345201 345380 . + . ID=gene323;Name=TREPR_3825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3825 CP001843.1 Genbank CDS 345201 345380 . + 0 ID=cds306;Parent=gene323;Dbxref=NCBI_GP:AEF85504.1;Name=AEF85504.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85504.1;transl_table=11 CP001843.1 Genbank gene 345616 346023 . - . ID=gene324;Name=TREPR_3824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3824 CP001843.1 Genbank CDS 345616 346023 . - 0 ID=cds307;Parent=gene324;Dbxref=NCBI_GP:AEF84494.1;Name=AEF84494.1;gbkey=CDS;product=PIN domain protein;protein_id=AEF84494.1;transl_table=11 CP001843.1 Genbank pseudogene 346013 346261 . - . ID=gene325;Name=TREPR_3823;Note=hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3823;pseudo=true CP001843.1 Genbank gene 346906 350898 . + . ID=gene326;Name=TREPR_3821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3821 CP001843.1 Genbank CDS 346906 350898 . + 0 ID=cds308;Parent=gene326;Dbxref=NCBI_GP:AEF84747.1;Name=AEF84747.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594;gbkey=CDS;product=DNA polymerase III subunit alpha;protein_id=AEF84747.1;transl_table=11 CP001843.1 Genbank gene 350909 351496 . + . ID=gene327;Name=TREPR_3820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3820 CP001843.1 Genbank CDS 350909 351496 . + 0 ID=cds309;Parent=gene327;Dbxref=NCBI_GP:AEF84004.1;Name=AEF84004.1;Note=identified by match to protein family HMM PF02325;gbkey=CDS;product=yggt family protein;protein_id=AEF84004.1;transl_table=11 CP001843.1 Genbank gene 351521 353806 . + . ID=gene328;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=TREPR_3819 CP001843.1 Genbank CDS 351521 353806 . + 0 ID=cds310;Parent=gene328;Dbxref=NCBI_GP:AEF86752.1;Name=AEF86752.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR00643;gbkey=CDS;gene=recG;product=ATP-dependent DNA helicase RecG;protein_id=AEF86752.1;transl_table=11 CP001843.1 Genbank gene 354130 355032 . + . ID=gene329;Name=TREPR_3818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3818 CP001843.1 Genbank CDS 354130 355032 . + 0 ID=cds311;Parent=gene329;Dbxref=NCBI_GP:AEF85754.1;Name=AEF85754.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=AEF85754.1;transl_table=11 CP001843.1 Genbank gene 355050 355742 . + . ID=gene330;Name=TREPR_3817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3817 CP001843.1 Genbank CDS 355050 355742 . + 0 ID=cds312;Parent=gene330;Dbxref=NCBI_GP:AEF84410.1;Name=AEF84410.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;product=putative beta-phosphoglucomutase (Beta-PGM);protein_id=AEF84410.1;transl_table=11 CP001843.1 Genbank gene 356003 357115 . - . ID=gene331;Name=TREPR_3816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3816 CP001843.1 Genbank CDS 356003 357115 . - 0 ID=cds313;Parent=gene331;Dbxref=NCBI_GP:AEF83838.1;Name=AEF83838.1;Note=identified by match to protein family HMM PF03330%3B match to protein family HMM PF05036;gbkey=CDS;product=putative lipoprotein%2C RlpA family;protein_id=AEF83838.1;transl_table=11 CP001843.1 Genbank gene 357308 357964 . - . ID=gene332;Name=TREPR_3815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3815 CP001843.1 Genbank CDS 357308 357964 . - 0 ID=cds314;Parent=gene332;Dbxref=NCBI_GP:AEF86785.1;Name=AEF86785.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;product=cyclic nucleotide-binding protein;protein_id=AEF86785.1;transl_table=11 CP001843.1 Genbank gene 357966 358967 . - . ID=gene333;Name=TREPR_3814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3814 CP001843.1 Genbank CDS 357966 358967 . - 0 ID=cds315;Parent=gene333;Dbxref=NCBI_GP:AEF85797.1;Name=AEF85797.1;Note=identified by match to protein family HMM PF00027%3B match to protein family HMM PF00515;gbkey=CDS;product=putative cyclic nucleotide-binding protein;protein_id=AEF85797.1;transl_table=11 CP001843.1 Genbank gene 359114 360001 . + . ID=gene334;Name=TREPR_3813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3813 CP001843.1 Genbank CDS 359114 360001 . + 0 ID=cds316;Parent=gene334;Dbxref=NCBI_GP:AEF85217.1;Name=AEF85217.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;product=PHP domain protein;protein_id=AEF85217.1;transl_table=11 CP001843.1 Genbank gene 360039 360458 . + . ID=gene335;Name=TREPR_3812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3812 CP001843.1 Genbank CDS 360039 360458 . + 0 ID=cds317;Parent=gene335;Dbxref=NCBI_GP:AEF84190.1;Name=AEF84190.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84190.1;transl_table=11 CP001843.1 Genbank gene 360530 361507 . + . ID=gene336;Name=TREPR_3811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3811 CP001843.1 Genbank CDS 360530 361507 . + 0 ID=cds318;Parent=gene336;Dbxref=NCBI_GP:AEF84741.1;Name=AEF84741.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;product=DHH superfamily protein%2C subfamily 1;protein_id=AEF84741.1;transl_table=11 CP001843.1 Genbank gene 361585 362448 . + . ID=gene337;Name=TREPR_3810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3810 CP001843.1 Genbank CDS 361585 362448 . + 0 ID=cds319;Parent=gene337;Dbxref=NCBI_GP:AEF83774.1;Name=AEF83774.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83774.1;transl_table=11 CP001843.1 Genbank gene 362540 363424 . + . ID=gene338;Name=TREPR_3809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3809 CP001843.1 Genbank CDS 362540 363424 . + 0 ID=cds320;Parent=gene338;Dbxref=NCBI_GP:AEF86304.1;Name=AEF86304.1;Note=identified by match to protein family HMM PF04378;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86304.1;transl_table=11 CP001843.1 Genbank gene 363707 366472 . + . ID=gene339;Name=TREPR_3808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3808 CP001843.1 Genbank CDS 363707 366472 . + 0 ID=cds321;Parent=gene339;Dbxref=NCBI_GP:AEF85305.1;Name=AEF85305.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85305.1;transl_table=11 CP001843.1 Genbank gene 366574 367230 . + . ID=gene340;Name=TREPR_3807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3807 CP001843.1 Genbank CDS 366574 367230 . + 0 ID=cds322;Parent=gene340;Dbxref=NCBI_GP:AEF85940.1;Name=AEF85940.1;Note=identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065;gbkey=CDS;product=hemolysin-3;protein_id=AEF85940.1;transl_table=11 CP001843.1 Genbank gene 367284 368981 . + . ID=gene341;Name=TREPR_3805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3805 CP001843.1 Genbank CDS 367284 368981 . + 0 ID=cds323;Parent=gene341;Dbxref=NCBI_GP:AEF84977.1;Name=AEF84977.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter%2C ATP-binding protein;protein_id=AEF84977.1;transl_table=11 CP001843.1 Genbank gene 368978 369736 . - . ID=gene342;Name=TREPR_3806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3806 CP001843.1 Genbank CDS 368978 369736 . - 0 ID=cds324;Parent=gene342;Dbxref=NCBI_GP:AEF86661.1;Name=AEF86661.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86661.1;transl_table=11 CP001843.1 Genbank gene 369824 370555 . + . ID=gene343;Name=TREPR_3804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3804 CP001843.1 Genbank CDS 369824 370555 . + 0 ID=cds325;Parent=gene343;Dbxref=NCBI_GP:AEF85974.1;Name=AEF85974.1;Note=identified by match to protein family HMM PF02629;gbkey=CDS;product=CoA-binding domain protein;protein_id=AEF85974.1;transl_table=11 CP001843.1 Genbank gene 370591 371697 . + . ID=gene344;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=TREPR_3803 CP001843.1 Genbank CDS 370591 371697 . + 0 ID=cds326;Parent=gene344;Dbxref=NCBI_GP:AEF86976.1;Name=AEF86976.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01364;gbkey=CDS;gene=serC;product=phosphoserine transaminase;protein_id=AEF86976.1;transl_table=11 CP001843.1 Genbank gene 371718 372893 . + . ID=gene345;Name=TREPR_3802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3802 CP001843.1 Genbank CDS 371718 372893 . + 0 ID=cds327;Parent=gene345;Dbxref=NCBI_GP:AEF86211.1;Name=AEF86211.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF01842%3B match to protein family HMM PF02826;gbkey=CDS;product=phosphoglycerate dehydrogenase;protein_id=AEF86211.1;transl_table=11 CP001843.1 Genbank gene 372958 373077 . + . ID=gene346;Name=TREPR_3801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3801 CP001843.1 Genbank CDS 372958 373077 . + 0 ID=cds328;Parent=gene346;Dbxref=NCBI_GP:AEF83701.1;Name=AEF83701.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83701.1;transl_table=11 CP001843.1 Genbank gene 373078 373506 . - . ID=gene347;Name=TREPR_3800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3800 CP001843.1 Genbank CDS 373078 373506 . - 0 ID=cds329;Parent=gene347;Dbxref=NCBI_GP:AEF84474.1;Name=AEF84474.1;Note=identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01753;gbkey=CDS;product=flavodoxin;protein_id=AEF84474.1;transl_table=11 CP001843.1 Genbank gene 373677 375989 . - . ID=gene348;Name=TREPR_3799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3799 CP001843.1 Genbank CDS 373677 375989 . - 0 ID=cds330;Parent=gene348;Dbxref=NCBI_GP:AEF87030.1;Name=AEF87030.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=putative transporter%2C major facilitator family;protein_id=AEF87030.1;transl_table=11 CP001843.1 Genbank gene 376120 376851 . + . ID=gene349;Name=TREPR_3798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3798 CP001843.1 Genbank CDS 376120 376851 . + 0 ID=cds331;Parent=gene349;Dbxref=NCBI_GP:AEF84199.1;Name=AEF84199.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84199.1;transl_table=11 CP001843.1 Genbank gene 376851 379853 . + . ID=gene350;Name=TREPR_3797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3797 CP001843.1 Genbank CDS 376851 379853 . + 0 ID=cds332;Parent=gene350;Dbxref=NCBI_GP:AEF85616.1;Name=AEF85616.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85616.1;transl_table=11 CP001843.1 Genbank gene 379846 383655 . + . ID=gene351;Name=TREPR_3796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3796 CP001843.1 Genbank CDS 379846 383655 . + 0 ID=cds333;Parent=gene351;Dbxref=NCBI_GP:AEF86571.1;Name=AEF86571.1;Note=identified by match to protein family HMM PF00580;gbkey=CDS;product=ATP-dependent DNA helicase%2C UvrD/Rep family;protein_id=AEF86571.1;transl_table=11 CP001843.1 Genbank gene 383668 386190 . + . ID=gene352;Name=TREPR_3795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3795 CP001843.1 Genbank CDS 383668 386190 . + 0 ID=cds334;Parent=gene352;Dbxref=NCBI_GP:AEF83879.1;Name=AEF83879.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF09371;gbkey=CDS;product=tex protein;protein_id=AEF83879.1;transl_table=11 CP001843.1 Genbank gene 386262 386993 . + . ID=gene353;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=TREPR_3794 CP001843.1 Genbank CDS 386262 386993 . + 0 ID=cds335;Parent=gene353;Dbxref=NCBI_GP:AEF85826.1;Name=AEF85826.1;Note=identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138;gbkey=CDS;gene=gidB;product=16S rRNA methyltransferase GidB;protein_id=AEF85826.1;transl_table=11 CP001843.1 Genbank gene 386978 388363 . + . ID=gene354;Name=TREPR_3793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3793 CP001843.1 Genbank CDS 386978 388363 . + 0 ID=cds336;Parent=gene354;Dbxref=NCBI_GP:AEF85458.1;Name=AEF85458.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85458.1;transl_table=11 CP001843.1 Genbank gene 388509 389099 . + . ID=gene355;Name=TREPR_3792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3792 CP001843.1 Genbank CDS 388509 389099 . + 0 ID=cds337;Parent=gene355;Dbxref=NCBI_GP:AEF86225.1;Name=AEF86225.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=transcriptional regulator%2C TetR family;protein_id=AEF86225.1;transl_table=11 CP001843.1 Genbank gene 389096 389743 . + . ID=gene356;Name=TREPR_3791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3791 CP001843.1 Genbank CDS 389096 389743 . + 0 ID=cds338;Parent=gene356;Dbxref=NCBI_GP:AEF85202.1;Name=AEF85202.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=metallo-beta-lactamase superfamily hydrolase;protein_id=AEF85202.1;transl_table=11 CP001843.1 Genbank gene 389740 390915 . + . ID=gene357;Name=TREPR_3790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3790 CP001843.1 Genbank CDS 389740 390915 . + 0 ID=cds339;Parent=gene357;Dbxref=NCBI_GP:AEF85978.1;Name=AEF85978.1;Note=identified by match to protein family HMM TIGR03061%3B match to protein family HMM TIGR03062;gbkey=CDS;product=phage infection protein;protein_id=AEF85978.1;transl_table=11 CP001843.1 Genbank gene 390919 392307 . + . ID=gene358;Name=TREPR_3789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3789 CP001843.1 Genbank CDS 390919 392307 . + 0 ID=cds340;Parent=gene358;Dbxref=NCBI_GP:AEF86746.1;Name=AEF86746.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF86746.1;transl_table=11 CP001843.1 Genbank gene 392401 392895 . + . ID=gene359;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=TREPR_3788 CP001843.1 Genbank CDS 392401 392895 . + 0 ID=cds341;Parent=gene359;Dbxref=NCBI_GP:AEF84010.1;Name=AEF84010.1;Note=identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162;gbkey=CDS;gene=purE;product=phosphoribosylaminoimidazole carboxylase%2C catalytic subunit;protein_id=AEF84010.1;transl_table=11 CP001843.1 Genbank gene 392892 393611 . + . ID=gene360;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=TREPR_3787 CP001843.1 Genbank CDS 392892 393611 . + 0 ID=cds342;Parent=gene360;Dbxref=NCBI_GP:AEF84441.1;Name=AEF84441.1;Note=identified by match to protein family HMM PF01259%3B match to protein family HMM TIGR00081;gbkey=CDS;gene=purC;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=AEF84441.1;transl_table=11 CP001843.1 Genbank gene 393586 395058 . + . ID=gene361;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=TREPR_3786 CP001843.1 Genbank CDS 393586 395058 . + 0 ID=cds343;Parent=gene361;Dbxref=NCBI_GP:AEF83661.1;Name=AEF83661.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM PF00310%3B match to protein family HMM TIGR01134;gbkey=CDS;gene=purF;product=amidophosphoribosyltransferase;protein_id=AEF83661.1;transl_table=11 CP001843.1 Genbank gene 395158 395508 . - . ID=gene362;Name=TREPR_3785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3785 CP001843.1 Genbank CDS 395158 395508 . - 0 ID=cds344;Parent=gene362;Dbxref=NCBI_GP:AEF86057.1;Name=AEF86057.1;Note=identified by match to protein family HMM PF07883;gbkey=CDS;product=polyketide synthesis domain protein;protein_id=AEF86057.1;transl_table=11 CP001843.1 Genbank gene 395539 397161 . - . ID=gene363;Name=TREPR_3784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3784 CP001843.1 Genbank CDS 395539 397161 . - 0 ID=cds345;Parent=gene363;Dbxref=NCBI_GP:AEF84431.1;Name=AEF84431.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782;gbkey=CDS;product=FGGY domain protein;protein_id=AEF84431.1;transl_table=11 CP001843.1 Genbank gene 397323 398201 . + . ID=gene364;Name=TREPR_3783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3783 CP001843.1 Genbank CDS 397323 398201 . + 0 ID=cds346;Parent=gene364;Dbxref=NCBI_GP:AEF83614.1;Name=AEF83614.1;Note=identified by match to protein family HMM PF01791;gbkey=CDS;product=deoxyribose-phosphate aldolase superfamily;protein_id=AEF83614.1;transl_table=11 CP001843.1 Genbank gene 398243 399343 . + . ID=gene365;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=TREPR_3782 CP001843.1 Genbank CDS 398243 399343 . + 0 ID=cds347;Parent=gene365;Dbxref=NCBI_GP:AEF87036.1;Name=AEF87036.1;Note=identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00878;gbkey=CDS;gene=purM;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=AEF87036.1;transl_table=11 CP001843.1 Genbank gene 399336 399491 . + . ID=gene366;Name=TREPR_3781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3781 CP001843.1 Genbank CDS 399336 399491 . + 0 ID=cds348;Parent=gene366;Dbxref=NCBI_GP:AEF84240.1;Name=AEF84240.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84240.1;transl_table=11 CP001843.1 Genbank gene 399488 400099 . + . ID=gene367;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=TREPR_3780 CP001843.1 Genbank CDS 399488 400099 . + 0 ID=cds349;Parent=gene367;Dbxref=NCBI_GP:AEF86200.1;Name=AEF86200.1;Note=identified by match to protein family HMM PF00551%3B match to protein family HMM TIGR00639;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=AEF86200.1;transl_table=11 CP001843.1 Genbank gene 400130 401299 . + . ID=gene368;Name=TREPR_3779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3779 CP001843.1 Genbank CDS 400130 401299 . + 0 ID=cds350;Parent=gene368;Dbxref=NCBI_GP:AEF85760.1;Name=AEF85760.1;Note=identified by match to protein family HMM PF00248;gbkey=CDS;product=Fe-S oxidoreductase;protein_id=AEF85760.1;transl_table=11 CP001843.1 Genbank gene 401317 402978 . + . ID=gene369;Name=TREPR_3778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3778 CP001843.1 Genbank CDS 401317 402978 . + 0 ID=cds351;Parent=gene369;Dbxref=NCBI_GP:AEF85000.1;Name=AEF85000.1;Note=identified by match to protein family HMM PF01808%3B match to protein family HMM PF02142;gbkey=CDS;product=bifunctional purine biosynthesis protein PurH;protein_id=AEF85000.1;transl_table=11 CP001843.1 Genbank gene 403002 403979 . + . ID=gene370;Name=TREPR_3777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3777 CP001843.1 Genbank CDS 403002 403979 . + 0 ID=cds352;Parent=gene370;Dbxref=NCBI_GP:AEF84779.1;Name=AEF84779.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968;gbkey=CDS;product=biotin synthase (Biotin synthetase);protein_id=AEF84779.1;transl_table=11 CP001843.1 Genbank gene 404093 405622 . - . ID=gene371;Name=TREPR_3776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3776 CP001843.1 Genbank CDS 404093 405622 . - 0 ID=cds353;Parent=gene371;Dbxref=NCBI_GP:AEF83845.1;Name=AEF83845.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83845.1;transl_table=11 CP001843.1 Genbank gene 405772 407103 . + . ID=gene372;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=TREPR_3774 CP001843.1 Genbank CDS 405772 407103 . + 0 ID=cds354;Parent=gene372;Dbxref=NCBI_GP:AEF84613.1;Name=AEF84613.1;Note=identified by match to protein family HMM PF01071%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM TIGR00877;gbkey=CDS;gene=purD;product=phosphoribosylamine--glycine ligase;protein_id=AEF84613.1;transl_table=11 CP001843.1 Genbank gene 407198 408550 . - . ID=gene373;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=TREPR_3773 CP001843.1 Genbank CDS 407198 408550 . - 0 ID=cds355;Parent=gene373;Dbxref=NCBI_GP:AEF84330.1;Name=AEF84330.1;Note=identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR01890;gbkey=CDS;gene=argA;product=amino-acid N-acetyltransferase;protein_id=AEF84330.1;transl_table=11 CP001843.1 Genbank gene 408679 409149 . + . ID=gene374;Name=TREPR_3772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3772 CP001843.1 Genbank CDS 408679 409149 . + 0 ID=cds356;Parent=gene374;Dbxref=NCBI_GP:AEF86195.1;Name=AEF86195.1;Note=identified by match to protein family HMM PF01814%3B match to protein family HMM TIGR02481;gbkey=CDS;product=hemerythrin family protein;protein_id=AEF86195.1;transl_table=11 CP001843.1 Genbank gene 409606 412047 . + . ID=gene375;Name=lon_1;gbkey=Gene;gene=lon_1;gene_biotype=protein_coding;locus_tag=TREPR_3771 CP001843.1 Genbank CDS 409606 412047 . + 0 ID=cds357;Parent=gene375;Dbxref=NCBI_GP:AEF86759.1;Name=AEF86759.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763;gbkey=CDS;gene=lon_1;product=endopeptidase La;protein_id=AEF86759.1;transl_table=11 CP001843.1 Genbank gene 412053 412454 . + . ID=gene376;Name=TREPR_3770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3770 CP001843.1 Genbank CDS 412053 412454 . + 0 ID=cds358;Parent=gene376;Dbxref=NCBI_GP:AEF85772.1;Name=AEF85772.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85772.1;transl_table=11 CP001843.1 Genbank gene 412548 413408 . + . ID=gene377;Name=TREPR_3769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3769 CP001843.1 Genbank CDS 412548 413408 . + 0 ID=cds359;Parent=gene377;Dbxref=NCBI_GP:AEF85389.1;Name=AEF85389.1;Note=identified by match to protein family HMM PF01435;gbkey=CDS;product=peptidase%2C M48 family;protein_id=AEF85389.1;transl_table=11 CP001843.1 Genbank gene 413415 414713 . - . ID=gene378;Name=TREPR_3768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3768 CP001843.1 Genbank CDS 413415 414713 . - 0 ID=cds360;Parent=gene378;Dbxref=NCBI_GP:AEF84771.1;Name=AEF84771.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF84771.1;transl_table=11 CP001843.1 Genbank gene 414715 415659 . - . ID=gene379;Name=TREPR_3767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3767 CP001843.1 Genbank CDS 414715 415659 . - 0 ID=cds361;Parent=gene379;Dbxref=NCBI_GP:AEF85614.1;Name=AEF85614.1;Note=identified by match to protein family HMM PF07238;gbkey=CDS;product=type IV pilus assembly protein PilZ;protein_id=AEF85614.1;transl_table=11 CP001843.1 Genbank gene 415901 416329 . + . ID=gene380;Name=TREPR_3765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3765 CP001843.1 Genbank CDS 415901 416329 . + 0 ID=cds362;Parent=gene380;Dbxref=NCBI_GP:AEF84623.1;Name=AEF84623.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=conserved domain protein;protein_id=AEF84623.1;transl_table=11 CP001843.1 Genbank gene 416512 416994 . + . ID=gene381;Name=TREPR_3764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3764 CP001843.1 Genbank CDS 416512 416994 . + 0 ID=cds363;Parent=gene381;Dbxref=NCBI_GP:AEF85410.1;Name=AEF85410.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase%2C GNAT family;protein_id=AEF85410.1;transl_table=11 CP001843.1 Genbank gene 417098 417595 . + . ID=gene382;Name=TREPR_3763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3763 CP001843.1 Genbank CDS 417098 417595 . + 0 ID=cds364;Parent=gene382;Dbxref=NCBI_GP:AEF86201.1;Name=AEF86201.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM TIGR02607;gbkey=CDS;product=putative addiction module antidote protein%2C HigA family;protein_id=AEF86201.1;transl_table=11 CP001843.1 Genbank gene 417964 418515 . + . ID=gene383;Name=TREPR_3762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3762 CP001843.1 Genbank CDS 417964 418515 . + 0 ID=cds365;Parent=gene383;Dbxref=NCBI_GP:AEF84324.1;Name=AEF84324.1;Note=identified by match to protein family HMM PF07155;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84324.1;transl_table=11 CP001843.1 Genbank gene 418610 420310 . + . ID=gene384;Name=TREPR_3761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3761 CP001843.1 Genbank CDS 418610 420310 . + 0 ID=cds366;Parent=gene384;Dbxref=NCBI_GP:AEF85132.1;Name=AEF85132.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=putative ABC transporter%2C ATP-binding protein;protein_id=AEF85132.1;transl_table=11 CP001843.1 Genbank gene 420307 421137 . + . ID=gene385;Name=TREPR_3760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3760 CP001843.1 Genbank CDS 420307 421137 . + 0 ID=cds367;Parent=gene385;Dbxref=NCBI_GP:AEF85780.1;Name=AEF85780.1;Note=identified by match to protein family HMM PF02361;gbkey=CDS;product=cobalt transport protein superfamily;protein_id=AEF85780.1;transl_table=11 CP001843.1 Genbank gene 421472 422986 . + . ID=gene386;Name=TREPR_3759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3759 CP001843.1 Genbank CDS 421472 422986 . + 0 ID=cds368;Parent=gene386;Dbxref=NCBI_GP:AEF83874.1;Name=AEF83874.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83874.1;transl_table=11 CP001843.1 Genbank gene 423018 423869 . + . ID=gene387;Name=TREPR_3758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3758 CP001843.1 Genbank CDS 423018 423869 . + 0 ID=cds369;Parent=gene387;Dbxref=NCBI_GP:AEF84655.1;Name=AEF84655.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04055;gbkey=CDS;product=radical SAM;protein_id=AEF84655.1;transl_table=11 CP001843.1 Genbank gene 423866 424819 . + . ID=gene388;Name=TREPR_3757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3757 CP001843.1 Genbank CDS 423866 424819 . + 0 ID=cds370;Parent=gene388;Dbxref=NCBI_GP:AEF83687.1;Name=AEF83687.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=kinase%2C PfkB family;protein_id=AEF83687.1;transl_table=11 CP001843.1 Genbank gene 424829 425752 . + . ID=gene389;Name=TREPR_3756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3756 CP001843.1 Genbank CDS 424829 425752 . + 0 ID=cds371;Parent=gene389;Dbxref=NCBI_GP:AEF85982.1;Name=AEF85982.1;Note=identified by match to protein family HMM PF04227;gbkey=CDS;product=indigoidine synthase A family protein;protein_id=AEF85982.1;transl_table=11 CP001843.1 Genbank gene 425778 426275 . + . ID=gene390;Name=TREPR_3755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3755 CP001843.1 Genbank CDS 425778 426275 . + 0 ID=cds372;Parent=gene390;Dbxref=NCBI_GP:AEF84353.1;Name=AEF84353.1;Note=identified by match to protein family HMM PF01323;gbkey=CDS;product=putative YwbO;protein_id=AEF84353.1;transl_table=11 CP001843.1 Genbank gene 426344 426493 . - . ID=gene391;Name=TREPR_3754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3754 CP001843.1 Genbank CDS 426344 426493 . - 0 ID=cds373;Parent=gene391;Dbxref=NCBI_GP:AEF86671.1;Name=AEF86671.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86671.1;transl_table=11 CP001843.1 Genbank gene 426527 427447 . - . ID=gene392;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=TREPR_3753 CP001843.1 Genbank CDS 426527 427447 . - 0 ID=cds374;Parent=gene392;Dbxref=NCBI_GP:AEF85929.1;Name=AEF85929.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136%3B match to protein family HMM TIGR01139;gbkey=CDS;gene=cysK;product=cysteine synthase A;protein_id=AEF85929.1;transl_table=11 CP001843.1 Genbank gene 428089 428580 . + . ID=gene393;Name=TREPR_3751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3751 CP001843.1 Genbank CDS 428089 428580 . + 0 ID=cds375;Parent=gene393;Dbxref=NCBI_GP:AEF83864.1;Name=AEF83864.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83864.1;transl_table=11 CP001843.1 Genbank pseudogene 428685 428846 . + . ID=gene394;Name=TREPR_3750;Note=conserved protein%2C with A weak D-galactarate dehydratase/altronate hydrolase domain%3B this region contains one or more premature stops and/or frameshifts;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3750;pseudo=true CP001843.1 Genbank pseudogene 428952 429539 . + . ID=gene395;Name=TREPR_3749;Note=conserved protein%2C with A weak D-galactarate dehydratase/altronate hydrolase domain%3B this region contains one or more premature stops and/or frameshifts;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3749;pseudo=true CP001843.1 Genbank gene 429503 429712 . + . ID=gene396;Name=TREPR_3748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3748 CP001843.1 Genbank CDS 429503 429712 . + 0 ID=cds376;Parent=gene396;Dbxref=NCBI_GP:AEF84331.1;Name=AEF84331.1;gbkey=CDS;product=filamentation induced by cAMP protein Fic;protein_id=AEF84331.1;transl_table=11 CP001843.1 Genbank gene 430147 430980 . + . ID=gene397;Name=TREPR_3747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3747 CP001843.1 Genbank CDS 430147 430980 . + 0 ID=cds377;Parent=gene397;Dbxref=NCBI_GP:AEF83950.1;Name=AEF83950.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase family 2;protein_id=AEF83950.1;transl_table=11 CP001843.1 Genbank gene 431010 432404 . + . ID=gene398;Name=TREPR_3746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3746 CP001843.1 Genbank CDS 431010 432404 . + 0 ID=cds378;Parent=gene398;Dbxref=NCBI_GP:AEF85048.1;Name=AEF85048.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF85048.1;transl_table=11 CP001843.1 Genbank gene 432424 433467 . + . ID=gene399;Name=TREPR_3745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3745 CP001843.1 Genbank CDS 432424 433467 . + 0 ID=cds379;Parent=gene399;Dbxref=NCBI_GP:AEF85523.1;Name=AEF85523.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=LPS biosynthesis glycosyltransferase-like protein;protein_id=AEF85523.1;transl_table=11 CP001843.1 Genbank gene 433512 434348 . + . ID=gene400;Name=TREPR_3744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3744 CP001843.1 Genbank CDS 433512 434348 . + 0 ID=cds380;Parent=gene400;Dbxref=NCBI_GP:AEF86511.1;Name=AEF86511.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C family 2;protein_id=AEF86511.1;transl_table=11 CP001843.1 Genbank pseudogene 434604 434732 . + . ID=gene401;Name=TREPR_3743;Note=putative epimerase/dehydratase%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3743;pseudo=true CP001843.1 Genbank gene 434745 436454 . + . ID=gene402;Name=TREPR_3742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3742 CP001843.1 Genbank CDS 434745 436454 . + 0 ID=cds381;Parent=gene402;Dbxref=NCBI_GP:AEF84460.1;Name=AEF84460.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=wlab protein;protein_id=AEF84460.1;transl_table=11 CP001843.1 Genbank gene 436464 437312 . + . ID=gene403;Name=TREPR_3741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3741 CP001843.1 Genbank CDS 436464 437312 . + 0 ID=cds382;Parent=gene403;Dbxref=NCBI_GP:AEF83951.1;Name=AEF83951.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83951.1;transl_table=11 CP001843.1 Genbank gene 437315 438382 . + . ID=gene404;Name=TREPR_3740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3740 CP001843.1 Genbank CDS 437315 438382 . + 0 ID=cds383;Parent=gene404;Dbxref=NCBI_GP:AEF86512.1;Name=AEF86512.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86512.1;transl_table=11 CP001843.1 Genbank gene 438397 439407 . + . ID=gene405;Name=TREPR_3739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3739 CP001843.1 Genbank CDS 438397 439407 . + 0 ID=cds384;Parent=gene405;Dbxref=NCBI_GP:AEF86093.1;Name=AEF86093.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=AEF86093.1;transl_table=11 CP001843.1 Genbank gene 439499 440356 . + . ID=gene406;Name=TREPR_3738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3738 CP001843.1 Genbank CDS 439499 440356 . + 0 ID=cds385;Parent=gene406;Dbxref=NCBI_GP:AEF85098.1;Name=AEF85098.1;gbkey=CDS;product=putative sugar transferase;protein_id=AEF85098.1;transl_table=11 CP001843.1 Genbank gene 440746 441336 . + . ID=gene407;Name=TREPR_3736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3736 CP001843.1 Genbank CDS 440746 441336 . + 0 ID=cds386;Parent=gene407;Dbxref=NCBI_GP:AEF85541.1;Name=AEF85541.1;Note=identified by match to protein family HMM PF03269;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85541.1;transl_table=11 CP001843.1 Genbank gene 441373 442269 . + . ID=gene408;Name=TREPR_3735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3735 CP001843.1 Genbank CDS 441373 442269 . + 0 ID=cds387;Parent=gene408;Dbxref=NCBI_GP:AEF83667.1;Name=AEF83667.1;Note=identified by match to protein family HMM PF01531;gbkey=CDS;product=alpha-1%2C2-fucosyltransferase;protein_id=AEF83667.1;transl_table=11 CP001843.1 Genbank gene 442269 443189 . + . ID=gene409;Name=TREPR_3734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3734 CP001843.1 Genbank CDS 442269 443189 . + 0 ID=cds388;Parent=gene409;Dbxref=NCBI_GP:AEF86597.1;Name=AEF86597.1;gbkey=CDS;product=nucleotide-diphospho-sugar transferase domain protein;protein_id=AEF86597.1;transl_table=11 CP001843.1 Genbank gene 443190 443801 . + . ID=gene410;Name=TREPR_3733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3733 CP001843.1 Genbank CDS 443190 443801 . + 0 ID=cds389;Parent=gene410;Dbxref=NCBI_GP:AEF86982.1;Name=AEF86982.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=galactoside O-acetyltransferase;protein_id=AEF86982.1;transl_table=11 CP001843.1 Genbank gene 443899 445071 . + . ID=gene411;Name=TREPR_3732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3732 CP001843.1 Genbank CDS 443899 445071 . + 0 ID=cds390;Parent=gene411;Dbxref=NCBI_GP:AEF85994.1;Name=AEF85994.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycosyltransferase%2C family 1;protein_id=AEF85994.1;transl_table=11 CP001843.1 Genbank gene 445107 446114 . + . ID=gene412;Name=TREPR_3731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3731 CP001843.1 Genbank CDS 445107 446114 . + 0 ID=cds391;Parent=gene412;Dbxref=NCBI_GP:AEF86032.1;Name=AEF86032.1;Note=identified by match to protein family HMM PF02706;gbkey=CDS;product=putative lipopolysaccharide biosynthesis protein;protein_id=AEF86032.1;transl_table=11 CP001843.1 Genbank gene 446178 447797 . + . ID=gene413;Name=TREPR_3730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3730 CP001843.1 Genbank CDS 446178 447797 . + 0 ID=cds392;Parent=gene413;Dbxref=NCBI_GP:AEF83541.1;Name=AEF83541.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83541.1;transl_table=11 CP001843.1 Genbank gene 447830 448009 . + . ID=gene414;Name=TREPR_3729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3729 CP001843.1 Genbank CDS 447830 448009 . + 0 ID=cds393;Parent=gene414;Dbxref=NCBI_GP:AEF84067.1;Name=AEF84067.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84067.1;transl_table=11 CP001843.1 Genbank gene 448021 449400 . + . ID=gene415;Name=TREPR_3728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3728 CP001843.1 Genbank CDS 448021 449400 . + 0 ID=cds394;Parent=gene415;Dbxref=NCBI_GP:AEF86995.1;Name=AEF86995.1;gbkey=CDS;product=NoeA host specific nodulation protein;protein_id=AEF86995.1;transl_table=11 CP001843.1 Genbank gene 449540 451003 . + . ID=gene416;Name=TREPR_3726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3726 CP001843.1 Genbank CDS 449540 451003 . + 0 ID=cds395;Parent=gene416;Dbxref=NCBI_GP:AEF83558.1;Name=AEF83558.1;Note=identified by match to protein family HMM PF02563;gbkey=CDS;product=putative polysaccharide biosynthesis/export domain protein;protein_id=AEF83558.1;transl_table=11 CP001843.1 Genbank gene 451065 452120 . + . ID=gene417;Name=TREPR_3725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3725 CP001843.1 Genbank CDS 451065 452120 . + 0 ID=cds396;Parent=gene417;Dbxref=NCBI_GP:AEF84534.1;Name=AEF84534.1;Note=identified by match to protein family HMM PF01757;gbkey=CDS;product=cellulose-binding%2C family II;protein_id=AEF84534.1;transl_table=11 CP001843.1 Genbank gene 452701 452991 . + . ID=gene418;Name=TREPR_3724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3724 CP001843.1 Genbank CDS 452701 452991 . + 0 ID=cds397;Parent=gene418;Dbxref=NCBI_GP:AEF86420.1;Name=AEF86420.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86420.1;transl_table=11 CP001843.1 Genbank gene 452991 453428 . + . ID=gene419;Name=TREPR_3723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3723 CP001843.1 Genbank CDS 452991 453428 . + 0 ID=cds398;Parent=gene419;Dbxref=NCBI_GP:AEF84102.1;Name=AEF84102.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84102.1;transl_table=11 CP001843.1 Genbank gene 453578 454624 . + . ID=gene420;Name=TREPR_3722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3722 CP001843.1 Genbank CDS 453578 454624 . + 0 ID=cds399;Parent=gene420;Dbxref=NCBI_GP:AEF84894.1;Name=AEF84894.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=extracellular solute-binding protein%2C family 3;protein_id=AEF84894.1;transl_table=11 CP001843.1 Genbank gene 454643 455302 . + . ID=gene421;Name=TREPR_3721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3721 CP001843.1 Genbank CDS 454643 455302 . + 0 ID=cds400;Parent=gene421;Dbxref=NCBI_GP:AEF86115.1;Name=AEF86115.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=L-cystine transport system permease protein TcyL;protein_id=AEF86115.1;transl_table=11 CP001843.1 Genbank gene 455316 456092 . + . ID=gene422;Name=TREPR_3720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3720 CP001843.1 Genbank CDS 455316 456092 . + 0 ID=cds401;Parent=gene422;Dbxref=NCBI_GP:AEF86145.1;Name=AEF86145.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ATP-binding protein;protein_id=AEF86145.1;transl_table=11 CP001843.1 Genbank gene 456114 457073 . - . ID=gene423;Name=TREPR_3719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3719 CP001843.1 Genbank CDS 456114 457073 . - 0 ID=cds402;Parent=gene423;Dbxref=NCBI_GP:AEF86726.1;Name=AEF86726.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=serine acetyltransferase%2C plasmid;protein_id=AEF86726.1;transl_table=11 CP001843.1 Genbank gene 457085 458962 . - . ID=gene424;Name=TREPR_3718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3718 CP001843.1 Genbank CDS 457085 458962 . - 0 ID=cds403;Parent=gene424;Dbxref=NCBI_GP:AEF84194.1;Name=AEF84194.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01979;gbkey=CDS;product=probable cysteine desulfurase;protein_id=AEF84194.1;transl_table=11 CP001843.1 Genbank gene 458949 459893 . - . ID=gene425;Name=TREPR_3717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3717 CP001843.1 Genbank CDS 458949 459893 . - 0 ID=cds404;Parent=gene425;Dbxref=NCBI_GP:AEF86188.1;Name=AEF86188.1;gbkey=CDS;product=srpi protein;protein_id=AEF86188.1;transl_table=11 CP001843.1 Genbank gene 460055 461227 . - . ID=gene426;Name=TREPR_3716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3716 CP001843.1 Genbank CDS 460055 461227 . - 0 ID=cds405;Parent=gene426;Dbxref=NCBI_GP:AEF86955.1;Name=AEF86955.1;Note=identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237;gbkey=CDS;product=Uba/ThiF-type NAD/FAD-binding protein;protein_id=AEF86955.1;transl_table=11 CP001843.1 Genbank gene 461230 461514 . - . ID=gene427;Name=TREPR_3715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3715 CP001843.1 Genbank CDS 461230 461514 . - 0 ID=cds406;Parent=gene427;Dbxref=NCBI_GP:AEF86027.1;Name=AEF86027.1;Note=identified by match to protein family HMM PF02597;gbkey=CDS;product=thiamineS protein;protein_id=AEF86027.1;transl_table=11 CP001843.1 Genbank gene 461538 461966 . - . ID=gene428;Name=TREPR_3714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3714 CP001843.1 Genbank CDS 461538 461966 . - 0 ID=cds407;Parent=gene428;Dbxref=NCBI_GP:AEF84316.1;Name=AEF84316.1;gbkey=CDS;product=Mov34/MPN/PAD-1;protein_id=AEF84316.1;transl_table=11 CP001843.1 Genbank gene 461963 462865 . - . ID=gene429;Name=TREPR_3713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3713 CP001843.1 Genbank CDS 461963 462865 . - 0 ID=cds408;Parent=gene429;Dbxref=NCBI_GP:AEF86311.1;Name=AEF86311.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136;gbkey=CDS;product=cysteine synthase B (O-acetylserine sulfhydrylase B) (O-acetylserine (Thiol)-lyase B) (CSase B);protein_id=AEF86311.1;transl_table=11 CP001843.1 Genbank gene 462994 464214 . - . ID=gene430;Name=TREPR_3712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3712 CP001843.1 Genbank CDS 462994 464214 . - 0 ID=cds409;Parent=gene430;Dbxref=NCBI_GP:AEF86087.1;Name=AEF86087.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321;gbkey=CDS;product=Xaa-Pro aminopeptidase;protein_id=AEF86087.1;transl_table=11 CP001843.1 Genbank gene 464351 465718 . - . ID=gene431;Name=TREPR_3711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3711 CP001843.1 Genbank CDS 464351 465718 . - 0 ID=cds410;Parent=gene431;Dbxref=NCBI_GP:AEF84881.1;Name=AEF84881.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF84881.1;transl_table=11 CP001843.1 Genbank gene 465814 466071 . + . ID=gene432;Name=TREPR_3708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3708 CP001843.1 Genbank CDS 465814 466071 . + 0 ID=cds411;Parent=gene432;Dbxref=NCBI_GP:AEF84221.1;Name=AEF84221.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84221.1;transl_table=11 CP001843.1 Genbank gene 466068 466625 . - . ID=gene433;Name=TREPR_3709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3709 CP001843.1 Genbank CDS 466068 466625 . - 0 ID=cds412;Parent=gene433;Dbxref=NCBI_GP:AEF84524.1;Name=AEF84524.1;Note=identified by match to protein family HMM PF02525;gbkey=CDS;product=iron-sulfur flavoprotein;protein_id=AEF84524.1;transl_table=11 CP001843.1 Genbank gene 466703 467272 . - . ID=gene434;Name=TREPR_3707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3707 CP001843.1 Genbank CDS 466703 467272 . - 0 ID=cds413;Parent=gene434;Dbxref=NCBI_GP:AEF84960.1;Name=AEF84960.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF84960.1;transl_table=11 CP001843.1 Genbank gene 467379 467957 . + . ID=gene435;Name=TREPR_3706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3706 CP001843.1 Genbank CDS 467379 467957 . + 0 ID=cds414;Parent=gene435;Dbxref=NCBI_GP:AEF86176.1;Name=AEF86176.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=transcriptional regulator%2C TetR family;protein_id=AEF86176.1;transl_table=11 CP001843.1 Genbank gene 467970 469439 . + . ID=gene436;Name=TREPR_3704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3704 CP001843.1 Genbank CDS 467970 469439 . + 0 ID=cds415;Parent=gene436;Dbxref=NCBI_GP:AEF86558.1;Name=AEF86558.1;Note=identified by match to protein family HMM PF00128;gbkey=CDS;product=possible maltodextrin glucosidase;protein_id=AEF86558.1;transl_table=11 CP001843.1 Genbank pseudogene 469531 469746 . - . ID=gene437;Name=TREPR_3703;Note=putative NADH-ubiquinone oxidoreductase chain 6 (nadhdehydrogenase subunit 6)%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3703;pseudo=true CP001843.1 Genbank gene 469750 470676 . - . ID=gene438;Name=TREPR_3702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3702 CP001843.1 Genbank CDS 469750 470676 . - 0 ID=cds416;Parent=gene438;Dbxref=NCBI_GP:AEF85005.1;Name=AEF85005.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85005.1;transl_table=11 CP001843.1 Genbank gene 471235 472050 . - . ID=gene439;Name=TREPR_3700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3700 CP001843.1 Genbank CDS 471235 472050 . - 0 ID=cds417;Parent=gene439;Dbxref=NCBI_GP:AEF83525.1;Name=AEF83525.1;Note=identified by match to protein family HMM PF01026;gbkey=CDS;product=deoxyribonuclease TatD (DNase tatD);protein_id=AEF83525.1;transl_table=11 CP001843.1 Genbank gene 472199 473974 . - . ID=gene440;Name=TREPR_3698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3698 CP001843.1 Genbank CDS 472199 473974 . - 0 ID=cds418;Parent=gene440;Dbxref=NCBI_GP:AEF85599.1;Name=AEF85599.1;gbkey=CDS;product=Y4bN protein;protein_id=AEF85599.1;transl_table=11 CP001843.1 Genbank pseudogene 474155 474688 . - . ID=gene441;Name=TREPR_3697;Note=conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3697;pseudo=true CP001843.1 Genbank pseudogene 474690 475037 . - . ID=gene442;Name=TREPR_3696;Note=ATPase of the AAA+ class%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3696;pseudo=true CP001843.1 Genbank pseudogene 475047 475652 . - . ID=gene443;Name=TREPR_3695;Note=ATPase of the AAA+ class%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3695;pseudo=true CP001843.1 Genbank gene 475654 475788 . - . ID=gene444;Name=TREPR_3694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3694 CP001843.1 Genbank CDS 475654 475788 . - 0 ID=cds419;Parent=gene444;Dbxref=NCBI_GP:AEF86422.1;Name=AEF86422.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86422.1;transl_table=11 CP001843.1 Genbank gene 475781 477193 . - . ID=gene445;Name=TREPR_3693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3693 CP001843.1 Genbank CDS 475781 477193 . - 0 ID=cds420;Parent=gene445;Dbxref=NCBI_GP:AEF84099.1;Name=AEF84099.1;gbkey=CDS;product=dna methylase-type I restriction-modification system;protein_id=AEF84099.1;transl_table=11 CP001843.1 Genbank gene 477190 479208 . - . ID=gene446;Name=TREPR_3692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3692 CP001843.1 Genbank CDS 477190 479208 . - 0 ID=cds421;Parent=gene446;Dbxref=NCBI_GP:AEF84895.1;Name=AEF84895.1;Note=identified by match to protein family HMM PF02384%3B match to protein family HMM PF04313;gbkey=CDS;product=N-6 DNA methylase;protein_id=AEF84895.1;transl_table=11 CP001843.1 Genbank gene 479269 479895 . - . ID=gene447;Name=TREPR_3691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3691 CP001843.1 Genbank CDS 479269 479895 . - 0 ID=cds422;Parent=gene447;Dbxref=NCBI_GP:AEF86139.1;Name=AEF86139.1;Note=identified by match to protein family HMM PF00717;gbkey=CDS;product=putative peptidase%2C S24 family;protein_id=AEF86139.1;transl_table=11 CP001843.1 Genbank gene 479895 480053 . - . ID=gene448;Name=TREPR_3690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3690 CP001843.1 Genbank CDS 479895 480053 . - 0 ID=cds423;Parent=gene448;Dbxref=NCBI_GP:AEF86890.1;Name=AEF86890.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86890.1;transl_table=11 CP001843.1 Genbank pseudogene 480115 480483 . - . ID=gene449;Name=TREPR_3689;Note=transposase TpnA2%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3689;pseudo=true CP001843.1 Genbank pseudogene 480676 481296 . - . ID=gene450;Name=TREPR_3687;Note=transposase%2C Mutator family%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00872;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3687;pseudo=true CP001843.1 Genbank gene 481547 482122 . - . ID=gene451;Name=TREPR_3686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3686 CP001843.1 Genbank CDS 481547 482122 . - 0 ID=cds424;Parent=gene451;Dbxref=NCBI_GP:AEF85768.1;Name=AEF85768.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85768.1;transl_table=11 CP001843.1 Genbank gene 482215 482745 . - . ID=gene452;Name=TREPR_3685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3685 CP001843.1 Genbank CDS 482215 482745 . - 0 ID=cds425;Parent=gene452;Dbxref=NCBI_GP:AEF84699.1;Name=AEF84699.1;Note=identified by match to protein family HMM PF00226;gbkey=CDS;product=DnaJ domain protein;protein_id=AEF84699.1;transl_table=11 CP001843.1 Genbank gene 482870 483079 . - . ID=gene453;Name=TREPR_3684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3684 CP001843.1 Genbank CDS 482870 483079 . - 0 ID=cds426;Parent=gene453;Dbxref=NCBI_GP:AEF85295.1;Name=AEF85295.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85295.1;transl_table=11 CP001843.1 Genbank pseudogene 483206 483358 . - . ID=gene454;Name=TREPR_3683;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3683;pseudo=true CP001843.1 Genbank gene 483575 483973 . - . ID=gene455;Name=TREPR_3682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3682 CP001843.1 Genbank CDS 483575 483973 . - 0 ID=cds427;Parent=gene455;Dbxref=NCBI_GP:AEF86865.1;Name=AEF86865.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=PIN domain protein;protein_id=AEF86865.1;transl_table=11 CP001843.1 Genbank gene 484486 485352 . - . ID=gene456;Name=TREPR_3680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3680 CP001843.1 Genbank CDS 484486 485352 . - 0 ID=cds428;Parent=gene456;Dbxref=NCBI_GP:AEF84906.1;Name=AEF84906.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84906.1;transl_table=11 CP001843.1 Genbank gene 485688 486023 . - . ID=gene457;Name=TREPR_3679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3679 CP001843.1 Genbank CDS 485688 486023 . - 0 ID=cds429;Parent=gene457;Dbxref=NCBI_GP:AEF85947.1;Name=AEF85947.1;gbkey=CDS;product=serine/threonine-protein kinase;protein_id=AEF85947.1;transl_table=11 CP001843.1 Genbank gene 486086 486475 . - . ID=gene458;Name=TREPR_3678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3678 CP001843.1 Genbank CDS 486086 486475 . - 0 ID=cds430;Parent=gene458;Dbxref=NCBI_GP:AEF86940.1;Name=AEF86940.1;Note=identified by match to protein family HMM PF02627;gbkey=CDS;product=carboxymuconolactone decarboxylase;protein_id=AEF86940.1;transl_table=11 CP001843.1 Genbank pseudogene 486748 486936 . + . ID=gene459;Name=TREPR_3677;Note=transcriptional regulator%2C MerR family%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3677;pseudo=true CP001843.1 Genbank gene 486945 487496 . - . ID=gene460;Name=TREPR_3676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3676 CP001843.1 Genbank CDS 486945 487496 . - 0 ID=cds431;Parent=gene460;Dbxref=NCBI_GP:AEF84777.1;Name=AEF84777.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;product=isochorismatase family protein;protein_id=AEF84777.1;transl_table=11 CP001843.1 Genbank gene 487699 488451 . - . ID=gene461;Name=TREPR_3675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3675 CP001843.1 Genbank CDS 487699 488451 . - 0 ID=cds432;Parent=gene461;Dbxref=NCBI_GP:AEF86833.1;Name=AEF86833.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86833.1;transl_table=11 CP001843.1 Genbank gene 488769 489998 . + . ID=gene462;Name=TREPR_3674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3674 CP001843.1 Genbank CDS 488769 489998 . + 0 ID=cds433;Parent=gene462;Dbxref=NCBI_GP:AEF84186.1;Name=AEF84186.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231;gbkey=CDS;product=small GTP-binding protein;protein_id=AEF84186.1;transl_table=11 CP001843.1 Genbank gene 489995 491398 . + . ID=gene463;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=TREPR_3673 CP001843.1 Genbank CDS 489995 491398 . + 0 ID=cds434;Parent=gene463;Dbxref=NCBI_GP:AEF85193.1;Name=AEF85193.1;Note=identified by match to protein family HMM PF00206;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=AEF85193.1;transl_table=11 CP001843.1 Genbank gene 491679 493022 . + . ID=gene464;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=TREPR_3672 CP001843.1 Genbank CDS 491679 493022 . + 0 ID=cds435;Parent=gene464;Dbxref=NCBI_GP:AEF85505.1;Name=AEF85505.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01769%3B match to protein family HMM PF03448%3B match to protein family HMM TIGR00400;gbkey=CDS;gene=mgtE;product=magnesium transporter;protein_id=AEF85505.1;transl_table=11 CP001843.1 Genbank gene 493346 493609 . + . ID=gene465;Name=TREPR_3670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3670 CP001843.1 Genbank CDS 493346 493609 . + 0 ID=cds436;Parent=gene465;Dbxref=NCBI_GP:AEF83888.1;Name=AEF83888.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83888.1;transl_table=11 CP001843.1 Genbank gene 493703 495142 . + . ID=gene466;Name=TREPR_3669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3669 CP001843.1 Genbank CDS 493703 495142 . + 0 ID=cds437;Parent=gene466;Dbxref=NCBI_GP:AEF85756.1;Name=AEF85756.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968;gbkey=CDS;product=ThiH protein;protein_id=AEF85756.1;transl_table=11 CP001843.1 Genbank gene 495257 496297 . + . ID=gene467;Name=TREPR_3668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3668 CP001843.1 Genbank CDS 495257 496297 . + 0 ID=cds438;Parent=gene467;Dbxref=NCBI_GP:AEF86723.1;Name=AEF86723.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM;protein_id=AEF86723.1;transl_table=11 CP001843.1 Genbank gene 496355 498007 . - . ID=gene468;Name=TREPR_3667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3667 CP001843.1 Genbank CDS 496355 498007 . - 0 ID=cds439;Parent=gene468;Dbxref=NCBI_GP:AEF86446.1;Name=AEF86446.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=periplasmic murein peptide-binding protein;protein_id=AEF86446.1;transl_table=11 CP001843.1 Genbank gene 498068 498187 . + . ID=gene469;Name=TREPR_3666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3666 CP001843.1 Genbank CDS 498068 498187 . + 0 ID=cds440;Parent=gene469;Dbxref=NCBI_GP:AEF85491.1;Name=AEF85491.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85491.1;transl_table=11 CP001843.1 Genbank gene 498675 500180 . + . ID=gene470;Name=TREPR_3665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3665 CP001843.1 Genbank CDS 498675 500180 . + 0 ID=cds441;Parent=gene470;Dbxref=NCBI_GP:AEF85770.1;Name=AEF85770.1;Note=identified by match to protein family HMM PF08757;gbkey=CDS;product=CotH protein;protein_id=AEF85770.1;transl_table=11 CP001843.1 Genbank gene 500287 501246 . - . ID=gene471;Name=TREPR_3664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3664 CP001843.1 Genbank CDS 500287 501246 . - 0 ID=cds442;Parent=gene471;Dbxref=NCBI_GP:AEF83916.1;Name=AEF83916.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF83916.1;transl_table=11 CP001843.1 Genbank gene 501243 502355 . - . ID=gene472;Name=TREPR_3663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3663 CP001843.1 Genbank CDS 501243 502355 . - 0 ID=cds443;Parent=gene472;Dbxref=NCBI_GP:AEF86856.1;Name=AEF86856.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein OppD;protein_id=AEF86856.1;transl_table=11 CP001843.1 Genbank gene 502365 503390 . - . ID=gene473;Name=TREPR_3662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3662 CP001843.1 Genbank CDS 502365 503390 . - 0 ID=cds444;Parent=gene473;Dbxref=NCBI_GP:AEF86072.1;Name=AEF86072.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein OppC;protein_id=AEF86072.1;transl_table=11 CP001843.1 Genbank gene 503390 504331 . - . ID=gene474;Name=TREPR_3661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3661 CP001843.1 Genbank CDS 503390 504331 . - 0 ID=cds445;Parent=gene474;Dbxref=NCBI_GP:AEF84875.1;Name=AEF84875.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein OppB;protein_id=AEF84875.1;transl_table=11 CP001843.1 Genbank gene 504463 504536 . + . ID=gene475;Name=TREPR_3956;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3956 CP001843.1 Genbank tRNA 504463 504536 . + . ID=rna7;Parent=gene475;gbkey=tRNA;product=tRNA-Met CP001843.1 Genbank exon 504463 504536 . + . ID=id11;Parent=rna7;gbkey=tRNA;product=tRNA-Met CP001843.1 Genbank gene 504668 504820 . - . ID=gene476;Name=TREPR_3658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3658 CP001843.1 Genbank CDS 504668 504820 . - 0 ID=cds446;Parent=gene476;Dbxref=NCBI_GP:AEF86498.1;Name=AEF86498.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86498.1;transl_table=11 CP001843.1 Genbank gene 505204 506205 . + . ID=gene477;Name=TREPR_3657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3657 CP001843.1 Genbank CDS 505204 506205 . + 0 ID=cds447;Parent=gene477;Dbxref=NCBI_GP:AEF85507.1;Name=AEF85507.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85507.1;transl_table=11 CP001843.1 Genbank gene 506312 507787 . - . ID=gene478;Name=TREPR_3656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3656 CP001843.1 Genbank CDS 506312 507787 . - 0 ID=cds448;Parent=gene478;Dbxref=NCBI_GP:AEF84299.1;Name=AEF84299.1;gbkey=CDS;product=ATPase;protein_id=AEF84299.1;transl_table=11 CP001843.1 Genbank pseudogene 508029 509249 . + . ID=gene479;Name=TREPR_3655;Note=OmpA family protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00691;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3655;pseudo=true CP001843.1 Genbank gene 509277 510509 . + . ID=gene480;Name=TREPR_3654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3654 CP001843.1 Genbank CDS 509277 510509 . + 0 ID=cds449;Parent=gene480;Dbxref=NCBI_GP:AEF85076.1;Name=AEF85076.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251;gbkey=CDS;product=phosphoribosylpyrophosphate synthetase;protein_id=AEF85076.1;transl_table=11 CP001843.1 Genbank gene 510514 511989 . + . ID=gene481;Name=TREPR_3653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3653 CP001843.1 Genbank CDS 510514 511989 . + 0 ID=cds450;Parent=gene481;Dbxref=NCBI_GP:AEF84477.1;Name=AEF84477.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782;gbkey=CDS;product=carhohydrate kinase%2C fggy family;protein_id=AEF84477.1;transl_table=11 CP001843.1 Genbank gene 511976 512653 . + . ID=gene482;Name=TREPR_3652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3652 CP001843.1 Genbank CDS 511976 512653 . + 0 ID=cds451;Parent=gene482;Dbxref=NCBI_GP:AEF83708.1;Name=AEF83708.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549;gbkey=CDS;product=HAD-superfamily hydrolase%2C subfamily IA%2C variant 1;protein_id=AEF83708.1;transl_table=11 CP001843.1 Genbank gene 512685 513809 . + . ID=gene483;Name=TREPR_3651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3651 CP001843.1 Genbank CDS 512685 513809 . + 0 ID=cds452;Parent=gene483;Dbxref=NCBI_GP:AEF86375.1;Name=AEF86375.1;Note=identified by match to protein family HMM PF00781;gbkey=CDS;product=diacylglycerol kinase;protein_id=AEF86375.1;transl_table=11 CP001843.1 Genbank gene 514091 514582 . - . ID=gene484;Name=TREPR_3649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3649 CP001843.1 Genbank CDS 514091 514582 . - 0 ID=cds453;Parent=gene484;Dbxref=NCBI_GP:AEF83808.1;Name=AEF83808.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83808.1;transl_table=11 CP001843.1 Genbank gene 514703 516055 . - . ID=gene485;Name=TREPR_3648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3648 CP001843.1 Genbank CDS 514703 516055 . - 0 ID=cds454;Parent=gene485;Dbxref=NCBI_GP:AEF86745.1;Name=AEF86745.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF86745.1;transl_table=11 CP001843.1 Genbank gene 516099 516812 . - . ID=gene486;Name=TREPR_3647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3647 CP001843.1 Genbank CDS 516099 516812 . - 0 ID=cds455;Parent=gene486;Dbxref=NCBI_GP:AEF85811.1;Name=AEF85811.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85811.1;transl_table=11 CP001843.1 Genbank gene 516799 517347 . - . ID=gene487;Name=TREPR_3646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3646 CP001843.1 Genbank CDS 516799 517347 . - 0 ID=cds456;Parent=gene487;Dbxref=NCBI_GP:AEF86860.1;Name=AEF86860.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86860.1;transl_table=11 CP001843.1 Genbank gene 517388 517780 . - . ID=gene488;Name=TREPR_3645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3645 CP001843.1 Genbank CDS 517388 517780 . - 0 ID=cds457;Parent=gene488;Dbxref=NCBI_GP:AEF84091.1;Name=AEF84091.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84091.1;transl_table=11 CP001843.1 Genbank gene 517853 518134 . - . ID=gene489;Name=TREPR_3644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3644 CP001843.1 Genbank CDS 517853 518134 . - 0 ID=cds458;Parent=gene489;Dbxref=NCBI_GP:AEF87013.1;Name=AEF87013.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF87013.1;transl_table=11 CP001843.1 Genbank gene 518282 518674 . + . ID=gene490;Name=TREPR_3643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3643 CP001843.1 Genbank CDS 518282 518674 . + 0 ID=cds459;Parent=gene490;Dbxref=NCBI_GP:AEF86008.1;Name=AEF86008.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=transcriptional regulator;protein_id=AEF86008.1;transl_table=11 CP001843.1 Genbank gene 518751 520967 . - . ID=gene491;Name=TREPR_3642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3642 CP001843.1 Genbank CDS 518751 520967 . - 0 ID=cds460;Parent=gene491;Dbxref=NCBI_GP:AEF84608.1;Name=AEF84608.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84608.1;transl_table=11 CP001843.1 Genbank gene 520964 522340 . - . ID=gene492;Name=TREPR_3641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3641 CP001843.1 Genbank CDS 520964 522340 . - 0 ID=cds461;Parent=gene492;Dbxref=NCBI_GP:AEF84581.1;Name=AEF84581.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF84581.1;transl_table=11 CP001843.1 Genbank gene 522474 523463 . + . ID=gene493;Name=TREPR_3640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3640 CP001843.1 Genbank CDS 522474 523463 . + 0 ID=cds462;Parent=gene493;Dbxref=NCBI_GP:AEF86895.1;Name=AEF86895.1;Note=identified by match to protein family HMM PF07670;gbkey=CDS;product=transporter gate domain protein;protein_id=AEF86895.1;transl_table=11 CP001843.1 Genbank gene 523552 524862 . - . ID=gene494;Name=TREPR_3639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3639 CP001843.1 Genbank CDS 523552 524862 . - 0 ID=cds463;Parent=gene494;Dbxref=NCBI_GP:AEF86158.1;Name=AEF86158.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336;gbkey=CDS;product=aspartyl-tRNA synthetase (Aspartate--tRNA ligase)(AspRS);protein_id=AEF86158.1;transl_table=11 CP001843.1 Genbank gene 524970 526481 . - . ID=gene495;Name=TREPR_3638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3638 CP001843.1 Genbank CDS 524970 526481 . - 0 ID=cds464;Parent=gene495;Dbxref=NCBI_GP:AEF84868.1;Name=AEF84868.1;Note=identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133;gbkey=CDS;product=glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C B subunit;protein_id=AEF84868.1;transl_table=11 CP001843.1 Genbank gene 526484 528001 . - . ID=gene496;Name=TREPR_3637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3637 CP001843.1 Genbank CDS 526484 528001 . - 0 ID=cds465;Parent=gene496;Dbxref=NCBI_GP:AEF86694.1;Name=AEF86694.1;Note=identified by match to protein family HMM PF01425;gbkey=CDS;product=glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C A subunit;protein_id=AEF86694.1;transl_table=11 CP001843.1 Genbank gene 528051 528431 . - . ID=gene497;Name=TREPR_3636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3636 CP001843.1 Genbank CDS 528051 528431 . - 0 ID=cds466;Parent=gene497;Dbxref=NCBI_GP:AEF86123.1;Name=AEF86123.1;gbkey=CDS;product=aspartyl/glutamyl-tRNA;protein_id=AEF86123.1;transl_table=11 CP001843.1 Genbank gene 528791 530404 . - . ID=gene498;Name=TREPR_3635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3635 CP001843.1 Genbank CDS 528791 530404 . - 0 ID=cds467;Parent=gene498;Dbxref=NCBI_GP:AEF85606.1;Name=AEF85606.1;gbkey=CDS;product=putative transcriptional regulator;protein_id=AEF85606.1;transl_table=11 CP001843.1 Genbank gene 530430 530678 . - . ID=gene499;Name=TREPR_3634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3634 CP001843.1 Genbank CDS 530430 530678 . - 0 ID=cds468;Parent=gene499;Dbxref=NCBI_GP:AEF86568.1;Name=AEF86568.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86568.1;transl_table=11 CP001843.1 Genbank gene 530690 530941 . - . ID=gene500;Name=TREPR_3633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3633 CP001843.1 Genbank CDS 530690 530941 . - 0 ID=cds469;Parent=gene500;Dbxref=NCBI_GP:AEF86897.1;Name=AEF86897.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86897.1;transl_table=11 CP001843.1 Genbank gene 531029 531781 . - . ID=gene501;Name=TREPR_3632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3632 CP001843.1 Genbank CDS 531029 531781 . - 0 ID=cds470;Parent=gene501;Dbxref=NCBI_GP:AEF84177.1;Name=AEF84177.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84177.1;transl_table=11 CP001843.1 Genbank gene 531804 531962 . - . ID=gene502;Name=TREPR_3631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3631 CP001843.1 Genbank CDS 531804 531962 . - 0 ID=cds471;Parent=gene502;Dbxref=NCBI_GP:AEF86016.1;Name=AEF86016.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86016.1;transl_table=11 CP001843.1 Genbank gene 531969 534398 . - . ID=gene503;Name=TREPR_3630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3630 CP001843.1 Genbank CDS 531969 534398 . - 0 ID=cds472;Parent=gene503;Dbxref=NCBI_GP:AEF86963.1;Name=AEF86963.1;Note=identified by match to protein family HMM PF01420%3B match to protein family HMM PF02384;gbkey=CDS;product=N-6 DNA methylase;protein_id=AEF86963.1;transl_table=11 CP001843.1 Genbank gene 534411 536969 . - . ID=gene504;Name=TREPR_3629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3629 CP001843.1 Genbank CDS 534411 536969 . - 0 ID=cds473;Parent=gene504;Dbxref=NCBI_GP:AEF83737.1;Name=AEF83737.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF04313%3B match to protein family HMM PF04851;gbkey=CDS;product=type III restriction enzyme%2C res subunit;protein_id=AEF83737.1;transl_table=11 CP001843.1 Genbank gene 536985 537122 . + . ID=gene505;Name=TREPR_3628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3628 CP001843.1 Genbank CDS 536985 537122 . + 0 ID=cds474;Parent=gene505;Dbxref=NCBI_GP:AEF84727.1;Name=AEF84727.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84727.1;transl_table=11 CP001843.1 Genbank gene 537391 537475 . + . ID=gene506;Name=TREPR_3955;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3955 CP001843.1 Genbank tRNA 537391 537475 . + . ID=rna8;Parent=gene506;gbkey=tRNA;product=tRNA-Ser CP001843.1 Genbank exon 537391 537475 . + . ID=id12;Parent=rna8;gbkey=tRNA;product=tRNA-Ser CP001843.1 Genbank gene 537556 537643 . + . ID=gene507;Name=TREPR_3954;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3954 CP001843.1 Genbank tRNA 537556 537643 . + . ID=rna9;Parent=gene507;gbkey=tRNA;product=tRNA-Ser CP001843.1 Genbank exon 537556 537643 . + . ID=id13;Parent=rna9;gbkey=tRNA;product=tRNA-Ser CP001843.1 Genbank gene 537827 537903 . + . ID=gene508;Name=TREPR_3953;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3953 CP001843.1 Genbank tRNA 537827 537903 . + . ID=rna10;Parent=gene508;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank exon 537827 537903 . + . ID=id14;Parent=rna10;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank gene 538143 539135 . + . ID=gene509;Name=TREPR_3623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3623 CP001843.1 Genbank CDS 538143 539135 . + 0 ID=cds475;Parent=gene509;Dbxref=NCBI_GP:AEF84212.1;Name=AEF84212.1;Note=identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573;gbkey=CDS;product=DNA polymerase III PolC-type (PolIII);protein_id=AEF84212.1;transl_table=11 CP001843.1 Genbank gene 539337 539549 . + . ID=gene510;Name=TREPR_3621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3621 CP001843.1 Genbank CDS 539337 539549 . + 0 ID=cds476;Parent=gene510;Dbxref=NCBI_GP:AEF84573.1;Name=AEF84573.1;gbkey=CDS;product=transposase%2C mutator family;protein_id=AEF84573.1;transl_table=11 CP001843.1 Genbank gene 539522 539641 . - . ID=gene511;Name=TREPR_3622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3622 CP001843.1 Genbank CDS 539522 539641 . - 0 ID=cds477;Parent=gene511;Dbxref=NCBI_GP:AEF83609.1;Name=AEF83609.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83609.1;transl_table=11 CP001843.1 Genbank gene 539625 539942 . - . ID=gene512;Name=TREPR_3620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3620 CP001843.1 Genbank CDS 539625 539942 . - 0 ID=cds478;Parent=gene512;Dbxref=NCBI_GP:AEF85562.1;Name=AEF85562.1;Note=identified by match to protein family HMM PF02627;gbkey=CDS;product=carboxymuconolactone decarboxylase;protein_id=AEF85562.1;transl_table=11 CP001843.1 Genbank gene 539986 540360 . - . ID=gene513;Name=TREPR_3619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3619 CP001843.1 Genbank CDS 539986 540360 . - 0 ID=cds479;Parent=gene513;Dbxref=NCBI_GP:AEF83905.1;Name=AEF83905.1;Note=identified by match to protein family HMM PF04993;gbkey=CDS;product=TfoX domain protein;protein_id=AEF83905.1;transl_table=11 CP001843.1 Genbank gene 540786 541907 . - . ID=gene514;Name=TREPR_3618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3618 CP001843.1 Genbank CDS 540786 541907 . - 0 ID=cds480;Parent=gene514;Dbxref=NCBI_GP:AEF84717.1;Name=AEF84717.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=periplasmic binding protein;protein_id=AEF84717.1;transl_table=11 CP001843.1 Genbank gene 541973 542749 . - . ID=gene515;Name=TREPR_3617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3617 CP001843.1 Genbank CDS 541973 542749 . - 0 ID=cds481;Parent=gene515;Dbxref=NCBI_GP:AEF86949.1;Name=AEF86949.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=hemin import ATP-binding protein HmuV;protein_id=AEF86949.1;transl_table=11 CP001843.1 Genbank gene 542751 543791 . - . ID=gene516;Name=TREPR_3616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3616 CP001843.1 Genbank CDS 542751 543791 . - 0 ID=cds482;Parent=gene516;Dbxref=NCBI_GP:AEF83975.1;Name=AEF83975.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;product=HmuU protein;protein_id=AEF83975.1;transl_table=11 CP001843.1 Genbank gene 544265 545602 . + . ID=gene517;Name=TREPR_3615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3615 CP001843.1 Genbank CDS 544265 545602 . + 0 ID=cds483;Parent=gene517;Dbxref=NCBI_GP:AEF84029.1;Name=AEF84029.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;product=outer membrane efflux protein;protein_id=AEF84029.1;transl_table=11 CP001843.1 Genbank gene 545599 546717 . + . ID=gene518;Name=TREPR_3614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3614 CP001843.1 Genbank CDS 545599 546717 . + 0 ID=cds484;Parent=gene518;Dbxref=NCBI_GP:AEF85008.1;Name=AEF85008.1;Note=identified by match to protein family HMM PF00364%3B match to protein family HMM TIGR01730;gbkey=CDS;product=putative membrane fusion protein;protein_id=AEF85008.1;transl_table=11 CP001843.1 Genbank gene 546727 549894 . + . ID=gene519;Name=TREPR_3613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3613 CP001843.1 Genbank CDS 546727 549894 . + 0 ID=cds485;Parent=gene519;Dbxref=NCBI_GP:AEF85465.1;Name=AEF85465.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;product=putative acriflavin resistance protein;protein_id=AEF85465.1;transl_table=11 CP001843.1 Genbank gene 549930 551678 . - . ID=gene520;Name=TREPR_3612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3612 CP001843.1 Genbank CDS 549930 551678 . - 0 ID=cds486;Parent=gene520;Dbxref=NCBI_GP:AEF86520.1;Name=AEF86520.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF03979%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937;gbkey=CDS;product=RNA polymerase sigma factor RpoD (Sigma-70);protein_id=AEF86520.1;transl_table=11 CP001843.1 Genbank gene 551786 551935 . - . ID=gene521;Name=TREPR_3611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3611 CP001843.1 Genbank CDS 551786 551935 . - 0 ID=cds487;Parent=gene521;Dbxref=NCBI_GP:AEF84364.1;Name=AEF84364.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84364.1;transl_table=11 CP001843.1 Genbank gene 551940 553481 . - . ID=gene522;Name=TREPR_3610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3610 CP001843.1 Genbank CDS 551940 553481 . - 0 ID=cds488;Parent=gene522;Dbxref=NCBI_GP:AEF84544.1;Name=AEF84544.1;gbkey=CDS;product=putative polymorphic outer membrane protein;protein_id=AEF84544.1;transl_table=11 CP001843.1 Genbank gene 553619 553705 . + . ID=gene523;Name=TREPR_3952;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3952 CP001843.1 Genbank tRNA 553619 553705 . + . ID=rna11;Parent=gene523;gbkey=tRNA;product=tRNA-Ser CP001843.1 Genbank exon 553619 553705 . + . ID=id15;Parent=rna11;gbkey=tRNA;product=tRNA-Ser CP001843.1 Genbank gene 553765 553851 . + . ID=gene524;Name=TREPR_3951;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3951 CP001843.1 Genbank tRNA 553765 553851 . + . ID=rna12;Parent=gene524;gbkey=tRNA;product=tRNA-Ser CP001843.1 Genbank exon 553765 553851 . + . ID=id16;Parent=rna12;gbkey=tRNA;product=tRNA-Ser CP001843.1 Genbank gene 554021 554575 . - . ID=gene525;Name=TREPR_3607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3607 CP001843.1 Genbank CDS 554021 554575 . - 0 ID=cds489;Parent=gene525;Dbxref=NCBI_GP:AEF85398.1;Name=AEF85398.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=nitroreductase;protein_id=AEF85398.1;transl_table=11 CP001843.1 Genbank gene 554783 555328 . - . ID=gene526;Name=TREPR_3606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3606 CP001843.1 Genbank CDS 554783 555328 . - 0 ID=cds490;Parent=gene526;Dbxref=NCBI_GP:AEF86226.1;Name=AEF86226.1;Note=identified by match to protein family HMM PF00301%3B match to protein family HMM PF02915;gbkey=CDS;product=rubredoxin/rubrerythrin;protein_id=AEF86226.1;transl_table=11 CP001843.1 Genbank gene 555528 555956 . - . ID=gene527;Name=TREPR_3605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3605 CP001843.1 Genbank CDS 555528 555956 . - 0 ID=cds491;Parent=gene527;Dbxref=NCBI_GP:AEF83906.1;Name=AEF83906.1;Note=identified by match to protein family HMM PF01475;gbkey=CDS;product=ferric uptake regulator%2C Fur family;protein_id=AEF83906.1;transl_table=11 CP001843.1 Genbank gene 556233 560792 . + . ID=gene528;Name=TREPR_3604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3604 CP001843.1 Genbank CDS 556233 560792 . + 0 ID=cds492;Parent=gene528;Dbxref=NCBI_GP:AEF84709.1;Name=AEF84709.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;product=activator of 2-hydroxyglutaryl-CoA dehydratase;protein_id=AEF84709.1;transl_table=11 CP001843.1 Genbank gene 560901 562280 . + . ID=gene529;Name=cobB_1;gbkey=Gene;gene=cobB_1;gene_biotype=protein_coding;locus_tag=TREPR_3603 CP001843.1 Genbank CDS 560901 562280 . + 0 ID=cds493;Parent=gene529;Dbxref=NCBI_GP:AEF86464.1;Name=AEF86464.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00379;gbkey=CDS;gene=cobB_1;product=cobyrinic Acid a%2Cc-diamide synthase;protein_id=AEF86464.1;transl_table=11 CP001843.1 Genbank gene 562351 563400 . - . ID=gene530;Name=TREPR_3602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3602 CP001843.1 Genbank CDS 562351 563400 . - 0 ID=cds494;Parent=gene530;Dbxref=NCBI_GP:AEF86816.1;Name=AEF86816.1;Note=identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240;gbkey=CDS;product=L-threonine 3-dehydrogenase;protein_id=AEF86816.1;transl_table=11 CP001843.1 Genbank gene 563530 564450 . + . ID=gene531;Name=TREPR_3601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3601 CP001843.1 Genbank CDS 563530 564450 . + 0 ID=cds495;Parent=gene531;Dbxref=NCBI_GP:AEF84392.1;Name=AEF84392.1;Note=identified by match to protein family HMM PF01734;gbkey=CDS;product=patatin family protein;protein_id=AEF84392.1;transl_table=11 CP001843.1 Genbank gene 564464 565348 . + . ID=gene532;Name=TREPR_3600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3600 CP001843.1 Genbank CDS 564464 565348 . + 0 ID=cds496;Parent=gene532;Dbxref=NCBI_GP:AEF85146.1;Name=AEF85146.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=serine acetyltransferase%2C plasmid (SAT);protein_id=AEF85146.1;transl_table=11 CP001843.1 Genbank gene 565364 566344 . + . ID=gene533;Name=TREPR_3599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3599 CP001843.1 Genbank CDS 565364 566344 . + 0 ID=cds497;Parent=gene533;Dbxref=NCBI_GP:AEF86314.1;Name=AEF86314.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=fructokinase;protein_id=AEF86314.1;transl_table=11 CP001843.1 Genbank gene 566389 567135 . - . ID=gene534;Name=TREPR_3598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3598 CP001843.1 Genbank CDS 566389 567135 . - 0 ID=cds498;Parent=gene534;Dbxref=NCBI_GP:AEF83536.1;Name=AEF83536.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83536.1;transl_table=11 CP001843.1 Genbank gene 567462 568142 . + . ID=gene535;Name=TREPR_3597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3597 CP001843.1 Genbank CDS 567462 568142 . + 0 ID=cds499;Parent=gene535;Dbxref=NCBI_GP:AEF85044.1;Name=AEF85044.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF85044.1;transl_table=11 CP001843.1 Genbank gene 568364 568867 . + . ID=gene536;Name=TREPR_3596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3596 CP001843.1 Genbank CDS 568364 568867 . + 0 ID=cds500;Parent=gene536;Dbxref=NCBI_GP:AEF85970.1;Name=AEF85970.1;Note=identified by match to protein family HMM PF01257;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=AEF85970.1;transl_table=11 CP001843.1 Genbank gene 568876 570750 . + . ID=gene537;Name=TREPR_3595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3595 CP001843.1 Genbank CDS 568876 570750 . + 0 ID=cds501;Parent=gene537;Dbxref=NCBI_GP:AEF86549.1;Name=AEF86549.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01512;gbkey=CDS;product=NADH dehydrogenase;protein_id=AEF86549.1;transl_table=11 CP001843.1 Genbank gene 570760 572505 . + . ID=gene538;Name=TREPR_3594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3594 CP001843.1 Genbank CDS 570760 572505 . + 0 ID=cds502;Parent=gene538;Dbxref=NCBI_GP:AEF84030.1;Name=AEF84030.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF02256%3B match to protein family HMM PF02906%3B match to protein family HMM TIGR02512;gbkey=CDS;product=iron hydrogenase 1 ([Fe] hydrogenase) (Fe-onlyhydrogenase) (CpI);protein_id=AEF84030.1;transl_table=11 CP001843.1 Genbank gene 572622 573152 . - . ID=gene539;Name=TREPR_3593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3593 CP001843.1 Genbank CDS 572622 573152 . - 0 ID=cds503;Parent=gene539;Dbxref=NCBI_GP:AEF85595.1;Name=AEF85595.1;Note=identified by match to protein family HMM PF00254;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase%2C fkbp-type;protein_id=AEF85595.1;transl_table=11 CP001843.1 Genbank pseudogene 573275 573685 . + . ID=gene540;Name=TREPR_3592;Note=hypothetical protein%3B this region contains one or more premature stops and/or frameshifts%3Bidentified by glimmer%3B putative;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3592;pseudo=true CP001843.1 Genbank gene 573698 576460 . - . ID=gene541;Name=TREPR_3591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3591 CP001843.1 Genbank CDS 573698 576460 . - 0 ID=cds504;Parent=gene541;Dbxref=NCBI_GP:AEF84491.1;Name=AEF84491.1;Note=identified by match to protein family HMM PF00211%3B match to protein family HMM PF05226;gbkey=CDS;product=adenylate/guanylate cyclase catalytic domain protein;protein_id=AEF84491.1;transl_table=11 CP001843.1 Genbank gene 576725 577396 . + . ID=gene542;Name=TREPR_3589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3589 CP001843.1 Genbank CDS 576725 577396 . + 0 ID=cds505;Parent=gene542;Dbxref=NCBI_GP:AEF86410.1;Name=AEF86410.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=two-component response regulator;protein_id=AEF86410.1;transl_table=11 CP001843.1 Genbank gene 577679 577792 . - . ID=gene543;Name=TREPR_3588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3588 CP001843.1 Genbank CDS 577679 577792 . - 0 ID=cds506;Parent=gene543;Dbxref=NCBI_GP:AEF85544.1;Name=AEF85544.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85544.1;transl_table=11 CP001843.1 Genbank gene 577812 581858 . + . ID=gene544;Name=TREPR_3587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3587 CP001843.1 Genbank CDS 577812 581858 . + 0 ID=cds507;Parent=gene544;Dbxref=NCBI_GP:AEF84279.1;Name=AEF84279.1;Note=identified by match to protein family HMM PF02415%3B match to protein family HMM PF09479%3B match to protein family HMM TIGR01376;gbkey=CDS;product=putative extracellular nuclease;protein_id=AEF84279.1;transl_table=11 CP001843.1 Genbank gene 582247 582501 . + . ID=gene545;Name=TREPR_3585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3585 CP001843.1 Genbank CDS 582247 582501 . + 0 ID=cds508;Parent=gene545;Dbxref=NCBI_GP:AEF85290.1;Name=AEF85290.1;Note=identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439;gbkey=CDS;product=putative transcriptional regulator;protein_id=AEF85290.1;transl_table=11 CP001843.1 Genbank gene 582514 582909 . + . ID=gene546;Name=TREPR_3584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3584 CP001843.1 Genbank CDS 582514 582909 . + 0 ID=cds509;Parent=gene546;Dbxref=NCBI_GP:AEF85207.1;Name=AEF85207.1;Note=identified by match to protein family HMM TIGR00305;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85207.1;transl_table=11 CP001843.1 Genbank gene 583048 583494 . - . ID=gene547;Name=TREPR_3582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3582 CP001843.1 Genbank CDS 583048 583494 . - 0 ID=cds510;Parent=gene547;Dbxref=NCBI_GP:AEF86299.1;Name=AEF86299.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86299.1;transl_table=11 CP001843.1 Genbank gene 583498 584646 . - . ID=gene548;Name=TREPR_3581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3581 CP001843.1 Genbank CDS 583498 584646 . - 0 ID=cds511;Parent=gene548;Dbxref=NCBI_GP:AEF84541.1;Name=AEF84541.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=ABC transporter integral membrane protein;protein_id=AEF84541.1;transl_table=11 CP001843.1 Genbank gene 584643 585725 . - . ID=gene549;Name=TREPR_3580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3580 CP001843.1 Genbank CDS 584643 585725 . - 0 ID=cds512;Parent=gene549;Dbxref=NCBI_GP:AEF85514.1;Name=AEF85514.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=ABC transporter integral membrane protein;protein_id=AEF85514.1;transl_table=11 CP001843.1 Genbank gene 585722 587314 . - . ID=gene550;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=TREPR_3579 CP001843.1 Genbank CDS 585722 587314 . - 0 ID=cds513;Parent=gene550;Dbxref=NCBI_GP:AEF86906.1;Name=AEF86906.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;gene=rbsA;product=ABC transporter%2C carbohydrate uptake transporter-2 (CUT2) family%2C ATP-binding protein;protein_id=AEF86906.1;transl_table=11 CP001843.1 Genbank gene 587382 588611 . - . ID=gene551;Name=TREPR_3578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3578 CP001843.1 Genbank CDS 587382 588611 . - 0 ID=cds514;Parent=gene551;Dbxref=NCBI_GP:AEF84131.1;Name=AEF84131.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84131.1;transl_table=11 CP001843.1 Genbank gene 588727 589947 . - . ID=gene552;Name=TREPR_3577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3577 CP001843.1 Genbank CDS 588727 589947 . - 0 ID=cds515;Parent=gene552;Dbxref=NCBI_GP:AEF85148.1;Name=AEF85148.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85148.1;transl_table=11 CP001843.1 Genbank gene 590018 591016 . - . ID=gene553;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=TREPR_3576 CP001843.1 Genbank CDS 590018 591016 . - 0 ID=cds516;Parent=gene553;Dbxref=NCBI_GP:AEF85910.1;Name=AEF85910.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233;gbkey=CDS;gene=trpS;product=tryptophan--tRNA ligase;protein_id=AEF85910.1;transl_table=11 CP001843.1 Genbank gene 591126 592427 . - . ID=gene554;Name=TREPR_3575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3575 CP001843.1 Genbank CDS 591126 592427 . - 0 ID=cds517;Parent=gene554;Dbxref=NCBI_GP:AEF83854.1;Name=AEF83854.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83854.1;transl_table=11 CP001843.1 Genbank gene 592619 593836 . + . ID=gene555;Name=TREPR_3574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3574 CP001843.1 Genbank CDS 592619 593836 . + 0 ID=cds518;Parent=gene555;Dbxref=NCBI_GP:AEF84643.1;Name=AEF84643.1;gbkey=CDS;product=ATPase;protein_id=AEF84643.1;transl_table=11 CP001843.1 Genbank gene 593916 594116 . - . ID=gene556;Name=TREPR_3573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3573 CP001843.1 Genbank CDS 593916 594116 . - 0 ID=cds519;Parent=gene556;Dbxref=NCBI_GP:AEF85426.1;Name=AEF85426.1;gbkey=CDS;product=nitroreductase;protein_id=AEF85426.1;transl_table=11 CP001843.1 Genbank gene 594124 595506 . - . ID=gene557;Name=TREPR_3572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3572 CP001843.1 Genbank CDS 594124 595506 . - 0 ID=cds520;Parent=gene557;Dbxref=NCBI_GP:AEF86276.1;Name=AEF86276.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF86276.1;transl_table=11 CP001843.1 Genbank gene 595680 596672 . - . ID=gene558;Name=TREPR_3571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3571 CP001843.1 Genbank CDS 595680 596672 . - 0 ID=cds521;Parent=gene558;Dbxref=NCBI_GP:AEF85769.1;Name=AEF85769.1;gbkey=CDS;product=vanillate:corrinoid protein methyltransferase;protein_id=AEF85769.1;transl_table=11 CP001843.1 Genbank gene 596696 598060 . - . ID=gene559;Name=TREPR_3570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3570 CP001843.1 Genbank CDS 596696 598060 . - 0 ID=cds522;Parent=gene559;Dbxref=NCBI_GP:AEF86808.1;Name=AEF86808.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=transporter%2C major facilitator family;protein_id=AEF86808.1;transl_table=11 CP001843.1 Genbank gene 598155 599636 . - . ID=gene560;Name=TREPR_3569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3569 CP001843.1 Genbank CDS 598155 599636 . - 0 ID=cds523;Parent=gene560;Dbxref=NCBI_GP:AEF84201.1;Name=AEF84201.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=putative 5'-Nucleotidase domain protein;protein_id=AEF84201.1;transl_table=11 CP001843.1 Genbank gene 599770 600852 . - . ID=gene561;Name=TREPR_3568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3568 CP001843.1 Genbank CDS 599770 600852 . - 0 ID=cds524;Parent=gene561;Dbxref=NCBI_GP:AEF85625.1;Name=AEF85625.1;gbkey=CDS;product=putative veratrol:corrinoid protein metyltransferase;protein_id=AEF85625.1;transl_table=11 CP001843.1 Genbank gene 600966 601844 . + . ID=gene562;Name=TREPR_3567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3567 CP001843.1 Genbank CDS 600966 601844 . + 0 ID=cds525;Parent=gene562;Dbxref=NCBI_GP:AEF84596.1;Name=AEF84596.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=putative transcriptional regulator%2C LysR family;protein_id=AEF84596.1;transl_table=11 CP001843.1 Genbank gene 601871 602344 . - . ID=gene563;Name=TREPR_3566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3566 CP001843.1 Genbank CDS 601871 602344 . - 0 ID=cds526;Parent=gene563;Dbxref=NCBI_GP:AEF86916.1;Name=AEF86916.1;Note=identified by match to protein family HMM PF01037;gbkey=CDS;product=transcriptional regulator%2C AsnC family;protein_id=AEF86916.1;transl_table=11 CP001843.1 Genbank gene 602581 603696 . + . ID=gene564;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=TREPR_3565 CP001843.1 Genbank CDS 602581 603696 . + 0 ID=cds527;Parent=gene564;Dbxref=NCBI_GP:AEF86120.1;Name=AEF86120.1;Note=identified by match to protein family HMM PF01262%3B match to protein family HMM PF02826%3B match to protein family HMM PF05222%3B match to protein family HMM TIGR00518;gbkey=CDS;gene=ald;product=alanine dehydrogenase;protein_id=AEF86120.1;transl_table=11 CP001843.1 Genbank gene 603721 605130 . + . ID=gene565;Name=TREPR_3564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3564 CP001843.1 Genbank CDS 603721 605130 . + 0 ID=cds528;Parent=gene565;Dbxref=NCBI_GP:AEF84898.1;Name=AEF84898.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;product=sodium:alanine symporter family protein;protein_id=AEF84898.1;transl_table=11 CP001843.1 Genbank gene 605230 606906 . + . ID=gene566;Name=TREPR_3563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3563 CP001843.1 Genbank CDS 605230 606906 . + 0 ID=cds529;Parent=gene566;Dbxref=NCBI_GP:AEF83967.1;Name=AEF83967.1;Note=identified by match to protein family HMM PF02690%3B match to protein family HMM TIGR00704;gbkey=CDS;product=putative conserved hypothetical integral membrane protein;protein_id=AEF83967.1;transl_table=11 CP001843.1 Genbank gene 606945 607592 . - . ID=gene567;Name=TREPR_3562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3562 CP001843.1 Genbank CDS 606945 607592 . - 0 ID=cds530;Parent=gene567;Dbxref=NCBI_GP:AEF83670.1;Name=AEF83670.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=hydrolase;protein_id=AEF83670.1;transl_table=11 CP001843.1 Genbank gene 607682 608851 . + . ID=gene568;Name=TREPR_3561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3561 CP001843.1 Genbank CDS 607682 608851 . + 0 ID=cds531;Parent=gene568;Dbxref=NCBI_GP:AEF86834.1;Name=AEF86834.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86834.1;transl_table=11 CP001843.1 Genbank gene 609199 609567 . + . ID=gene569;Name=TREPR_3560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3560 CP001843.1 Genbank CDS 609199 609567 . + 0 ID=cds532;Parent=gene569;Dbxref=NCBI_GP:AEF85671.1;Name=AEF85671.1;Note=identified by match to protein family HMM PF06296;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85671.1;transl_table=11 CP001843.1 Genbank gene 609564 609770 . + . ID=gene570;Name=TREPR_3559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3559 CP001843.1 Genbank CDS 609564 609770 . + 0 ID=cds533;Parent=gene570;Dbxref=NCBI_GP:AEF84444.1;Name=AEF84444.1;gbkey=CDS;product=putative helix-turn-helix protein;protein_id=AEF84444.1;transl_table=11 CP001843.1 Genbank gene 609833 610060 . - . ID=gene571;Name=TREPR_3558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3558 CP001843.1 Genbank CDS 609833 610060 . - 0 ID=cds534;Parent=gene571;Dbxref=NCBI_GP:AEF84114.1;Name=AEF84114.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84114.1;transl_table=11 CP001843.1 Genbank gene 610195 610395 . - . ID=gene572;Name=TREPR_3556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3556 CP001843.1 Genbank CDS 610195 610395 . - 0 ID=cds535;Parent=gene572;Dbxref=NCBI_GP:AEF86076.1;Name=AEF86076.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86076.1;transl_table=11 CP001843.1 Genbank gene 611674 612444 . - . ID=gene573;Name=TREPR_3554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3554 CP001843.1 Genbank CDS 611674 612444 . - 0 ID=cds536;Parent=gene573;Dbxref=NCBI_GP:AEF84603.1;Name=AEF84603.1;Note=identified by match to protein family HMM PF03880;gbkey=CDS;product=DbpA RNA binding domain protein;protein_id=AEF84603.1;transl_table=11 CP001843.1 Genbank gene 612428 612544 . - . ID=gene574;Name=TREPR_3553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3553 CP001843.1 Genbank CDS 612428 612544 . - 0 ID=cds537;Parent=gene574;Dbxref=NCBI_GP:AEF84267.1;Name=AEF84267.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84267.1;transl_table=11 CP001843.1 Genbank gene 612507 613373 . - . ID=gene575;Name=TREPR_3552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3552 CP001843.1 Genbank CDS 612507 613373 . - 0 ID=cds538;Parent=gene575;Dbxref=NCBI_GP:AEF84987.1;Name=AEF84987.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase%2C GNAT family;protein_id=AEF84987.1;transl_table=11 CP001843.1 Genbank gene 613376 614479 . - . ID=gene576;Name=TREPR_3551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3551 CP001843.1 Genbank CDS 613376 614479 . - 0 ID=cds539;Parent=gene576;Dbxref=NCBI_GP:AEF84667.1;Name=AEF84667.1;Note=identified by match to protein family HMM PF00365;gbkey=CDS;product=6-phosphofructokinase;protein_id=AEF84667.1;transl_table=11 CP001843.1 Genbank gene 614586 615413 . + . ID=gene577;Name=TREPR_3550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3550 CP001843.1 Genbank CDS 614586 615413 . + 0 ID=cds540;Parent=gene577;Dbxref=NCBI_GP:AEF86929.1;Name=AEF86929.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86929.1;transl_table=11 CP001843.1 Genbank gene 615404 615691 . + . ID=gene578;Name=TREPR_3549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3549 CP001843.1 Genbank CDS 615404 615691 . + 0 ID=cds541;Parent=gene578;Dbxref=NCBI_GP:AEF85813.1;Name=AEF85813.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85813.1;transl_table=11 CP001843.1 Genbank gene 615756 616307 . + . ID=gene579;Name=TREPR_3548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3548 CP001843.1 Genbank CDS 615756 616307 . + 0 ID=cds542;Parent=gene579;Dbxref=NCBI_GP:AEF84531.1;Name=AEF84531.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84531.1;transl_table=11 CP001843.1 Genbank gene 616399 617298 . + . ID=gene580;Name=TREPR_3547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3547 CP001843.1 Genbank CDS 616399 617298 . + 0 ID=cds543;Parent=gene580;Dbxref=NCBI_GP:AEF84207.1;Name=AEF84207.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84207.1;transl_table=11 CP001843.1 Genbank gene 617322 618968 . - . ID=gene581;Name=TREPR_3546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3546 CP001843.1 Genbank CDS 617322 618968 . - 0 ID=cds544;Parent=gene581;Dbxref=NCBI_GP:AEF86451.1;Name=AEF86451.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=putative extracellular solute-binding protein%2C family 5;protein_id=AEF86451.1;transl_table=11 CP001843.1 Genbank gene 619014 619784 . - . ID=gene582;Name=TREPR_3545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3545 CP001843.1 Genbank CDS 619014 619784 . - 0 ID=cds545;Parent=gene582;Dbxref=NCBI_GP:AEF85654.1;Name=AEF85654.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;product=carbon monoxide dehydrogenase accessory protein CooC;protein_id=AEF85654.1;transl_table=11 CP001843.1 Genbank gene 619801 621621 . - . ID=gene583;Name=TREPR_3544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3544 CP001843.1 Genbank CDS 619801 621621 . - 0 ID=cds546;Parent=gene583;Dbxref=NCBI_GP:AEF85918.1;Name=AEF85918.1;gbkey=CDS;product=high-affinity nickel-transporter;protein_id=AEF85918.1;transl_table=11 CP001843.1 Genbank gene 621618 624248 . - . ID=gene584;Name=TREPR_3543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3543 CP001843.1 Genbank CDS 621618 624248 . - 0 ID=cds547;Parent=gene584;Dbxref=NCBI_GP:AEF85665.1;Name=AEF85665.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00528;gbkey=CDS;product=glutathione import ATP-binding protein GsiA;protein_id=AEF85665.1;transl_table=11 CP001843.1 Genbank gene 624245 625225 . - . ID=gene585;Name=TREPR_3542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3542 CP001843.1 Genbank CDS 624245 625225 . - 0 ID=cds548;Parent=gene585;Dbxref=NCBI_GP:AEF85194.1;Name=AEF85194.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=probable peptide ABC transporter permease protein y4tP;protein_id=AEF85194.1;transl_table=11 CP001843.1 Genbank gene 625411 626178 . + . ID=gene586;Name=nifH_1;gbkey=Gene;gene=nifH_1;gene_biotype=protein_coding;locus_tag=TREPR_3541 CP001843.1 Genbank CDS 625411 626178 . + 0 ID=cds549;Parent=gene586;Dbxref=NCBI_GP:AEF84422.1;Name=AEF84422.1;Note=identified by match to protein family HMM PF00142;gbkey=CDS;gene=nifH_1;product=nitrogenase iron protein;protein_id=AEF84422.1;transl_table=11 CP001843.1 Genbank gene 626175 627572 . + . ID=gene587;Name=TREPR_3540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3540 CP001843.1 Genbank CDS 626175 627572 . + 0 ID=cds550;Parent=gene587;Dbxref=NCBI_GP:AEF85470.1;Name=AEF85470.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85470.1;transl_table=11 CP001843.1 Genbank gene 627672 628895 . + . ID=gene588;Name=TREPR_3538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3538 CP001843.1 Genbank CDS 627672 628895 . + 0 ID=cds551;Parent=gene588;Dbxref=NCBI_GP:AEF86322.1;Name=AEF86322.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86322.1;transl_table=11 CP001843.1 Genbank gene 628867 629118 . - . ID=gene589;Name=TREPR_3539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3539 CP001843.1 Genbank CDS 628867 629118 . - 0 ID=cds552;Parent=gene589;Dbxref=NCBI_GP:AEF86469.1;Name=AEF86469.1;gbkey=CDS;product=heavy metal translocating P-type ATPase;protein_id=AEF86469.1;transl_table=11 CP001843.1 Genbank gene 629131 631215 . - . ID=gene590;Name=TREPR_3537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3537 CP001843.1 Genbank CDS 629131 631215 . - 0 ID=cds553;Parent=gene590;Dbxref=NCBI_GP:AEF83576.1;Name=AEF83576.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01525;gbkey=CDS;product=heavy metal translocating P-type ATPase;protein_id=AEF83576.1;transl_table=11 CP001843.1 Genbank gene 631219 631452 . - . ID=gene591;Name=TREPR_3536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3536 CP001843.1 Genbank CDS 631219 631452 . - 0 ID=cds554;Parent=gene591;Dbxref=NCBI_GP:AEF84614.1;Name=AEF84614.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84614.1;transl_table=11 CP001843.1 Genbank gene 631642 632055 . + . ID=gene592;Name=TREPR_3535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3535 CP001843.1 Genbank CDS 631642 632055 . + 0 ID=cds555;Parent=gene592;Dbxref=NCBI_GP:AEF85905.1;Name=AEF85905.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=drug/metabolite transporter%2C DMT family;protein_id=AEF85905.1;transl_table=11 CP001843.1 Genbank gene 632074 633018 . - . ID=gene593;Name=TREPR_3534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3534 CP001843.1 Genbank CDS 632074 633018 . - 0 ID=cds556;Parent=gene593;Dbxref=NCBI_GP:AEF84026.1;Name=AEF84026.1;Note=identified by match to protein family HMM PF02653%3B overlaps another CDS with the same product name;gbkey=CDS;product=inner-membrane translocator;protein_id=AEF84026.1;transl_table=11 CP001843.1 Genbank gene 633015 634151 . - . ID=gene594;Name=TREPR_3533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3533 CP001843.1 Genbank CDS 633015 634151 . - 0 ID=cds557;Parent=gene594;Dbxref=NCBI_GP:AEF85200.1;Name=AEF85200.1;Note=identified by match to protein family HMM PF02653%3B overlaps another CDS with the same product name;gbkey=CDS;product=inner-membrane translocator;protein_id=AEF85200.1;transl_table=11 CP001843.1 Genbank gene 634138 635718 . - . ID=gene595;Name=TREPR_3532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3532 CP001843.1 Genbank CDS 634138 635718 . - 0 ID=cds558;Parent=gene595;Dbxref=NCBI_GP:AEF85490.1;Name=AEF85490.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=AEF85490.1;transl_table=11 CP001843.1 Genbank gene 635847 636929 . - . ID=gene596;Name=TREPR_3531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3531 CP001843.1 Genbank CDS 635847 636929 . - 0 ID=cds559;Parent=gene596;Dbxref=NCBI_GP:AEF86981.1;Name=AEF86981.1;Note=identified by match to protein family HMM PF02608;gbkey=CDS;product=basic membrane lipoprotein;protein_id=AEF86981.1;transl_table=11 CP001843.1 Genbank gene 637013 638968 . - . ID=gene597;Name=TREPR_3530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3530 CP001843.1 Genbank CDS 637013 638968 . - 0 ID=cds560;Parent=gene597;Dbxref=NCBI_GP:AEF84187.1;Name=AEF84187.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=putative 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=AEF84187.1;transl_table=11 CP001843.1 Genbank gene 639012 639641 . - . ID=gene598;Name=TREPR_3529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3529 CP001843.1 Genbank CDS 639012 639641 . - 0 ID=cds561;Parent=gene598;Dbxref=NCBI_GP:AEF84939.1;Name=AEF84939.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84939.1;transl_table=11 CP001843.1 Genbank gene 639716 639943 . - . ID=gene599;Name=TREPR_3528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3528 CP001843.1 Genbank CDS 639716 639943 . - 0 ID=cds562;Parent=gene599;Dbxref=NCBI_GP:AEF86505.1;Name=AEF86505.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86505.1;transl_table=11 CP001843.1 Genbank gene 640086 640946 . - . ID=gene600;Name=TREPR_3527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3527 CP001843.1 Genbank CDS 640086 640946 . - 0 ID=cds563;Parent=gene600;Dbxref=NCBI_GP:AEF85723.1;Name=AEF85723.1;Note=identified by match to protein family HMM PF01026;gbkey=CDS;product=deoxyribonuclease%2C TatD family;protein_id=AEF85723.1;transl_table=11 CP001843.1 Genbank gene 640994 641076 . + . ID=gene601;Name=TREPR_3950;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3950 CP001843.1 Genbank tRNA 640994 641076 . + . ID=rna13;Parent=gene601;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank exon 640994 641076 . + . ID=id17;Parent=rna13;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank gene 641148 643292 . - . ID=gene602;Name=TREPR_3525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3525 CP001843.1 Genbank CDS 641148 643292 . - 0 ID=cds564;Parent=gene602;Dbxref=NCBI_GP:AEF84692.1;Name=AEF84692.1;Note=identified by match to protein family HMM PF00120;gbkey=CDS;product=glutamine synthetase (Glutamate--ammonia ligase) (GS);protein_id=AEF84692.1;transl_table=11 CP001843.1 Genbank gene 643589 644818 . - . ID=gene603;Name=TREPR_3523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3523 CP001843.1 Genbank CDS 643589 644818 . - 0 ID=cds565;Parent=gene603;Dbxref=NCBI_GP:AEF85767.1;Name=AEF85767.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730;gbkey=CDS;product=multi-sensor signal transduction histidine kinase;protein_id=AEF85767.1;transl_table=11 CP001843.1 Genbank gene 644883 645503 . + . ID=gene604;Name=TREPR_3522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3522 CP001843.1 Genbank CDS 644883 645503 . + 0 ID=cds566;Parent=gene604;Dbxref=NCBI_GP:AEF85253.1;Name=AEF85253.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85253.1;transl_table=11 CP001843.1 Genbank gene 645607 645801 . - . ID=gene605;Name=TREPR_3521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3521 CP001843.1 Genbank CDS 645607 645801 . - 0 ID=cds567;Parent=gene605;Dbxref=NCBI_GP:AEF85549.1;Name=AEF85549.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85549.1;transl_table=11 CP001843.1 Genbank gene 645813 648089 . - . ID=gene606;Name=TREPR_3520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3520 CP001843.1 Genbank CDS 645813 648089 . - 0 ID=cds568;Parent=gene606;Dbxref=NCBI_GP:AEF84388.1;Name=AEF84388.1;Note=identified by match to protein family HMM PF02012;gbkey=CDS;product=putative cell wall/surface repeat protein;protein_id=AEF84388.1;transl_table=11 CP001843.1 Genbank gene 648086 648466 . - . ID=gene607;Name=TREPR_3519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3519 CP001843.1 Genbank CDS 648086 648466 . - 0 ID=cds569;Parent=gene607;Dbxref=NCBI_GP:AEF86617.1;Name=AEF86617.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86617.1;transl_table=11 CP001843.1 Genbank gene 648537 649157 . - . ID=gene608;Name=TREPR_3518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3518 CP001843.1 Genbank CDS 648537 649157 . - 0 ID=cds570;Parent=gene608;Dbxref=NCBI_GP:AEF86128.1;Name=AEF86128.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=DNA-binding response regulator;protein_id=AEF86128.1;transl_table=11 CP001843.1 Genbank gene 649443 649613 . - . ID=gene609;Name=TREPR_3517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3517 CP001843.1 Genbank CDS 649443 649613 . - 0 ID=cds571;Parent=gene609;Dbxref=NCBI_GP:AEF84526.1;Name=AEF84526.1;Note=identified by match to protein family HMM PF05534;gbkey=CDS;product=HicB;protein_id=AEF84526.1;transl_table=11 CP001843.1 Genbank gene 649678 649911 . + . ID=gene610;Name=TREPR_3516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3516 CP001843.1 Genbank CDS 649678 649911 . + 0 ID=cds572;Parent=gene610;Dbxref=NCBI_GP:AEF85520.1;Name=AEF85520.1;Note=identified by match to protein family HMM PF03683;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85520.1;transl_table=11 CP001843.1 Genbank gene 649904 650362 . + . ID=gene611;Name=TREPR_3515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3515 CP001843.1 Genbank CDS 649904 650362 . + 0 ID=cds573;Parent=gene611;Dbxref=NCBI_GP:AEF84121.1;Name=AEF84121.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84121.1;transl_table=11 CP001843.1 Genbank gene 650425 650658 . + . ID=gene612;Name=TREPR_3514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3514 CP001843.1 Genbank CDS 650425 650658 . + 0 ID=cds574;Parent=gene612;Dbxref=NCBI_GP:AEF86737.1;Name=AEF86737.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86737.1;transl_table=11 CP001843.1 Genbank gene 650761 651102 . - . ID=gene613;Name=TREPR_3513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3513 CP001843.1 Genbank CDS 650761 651102 . - 0 ID=cds575;Parent=gene613;Dbxref=NCBI_GP:AEF85957.1;Name=AEF85957.1;Note=identified by match to protein family HMM PF00543;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=AEF85957.1;transl_table=11 CP001843.1 Genbank gene 651114 652475 . - . ID=gene614;Name=amt;gbkey=Gene;gene=amt;gene_biotype=protein_coding;locus_tag=TREPR_3512 CP001843.1 Genbank CDS 651114 652475 . - 0 ID=cds576;Parent=gene614;Dbxref=NCBI_GP:AEF85164.1;Name=AEF85164.1;Note=identified by match to protein family HMM PF00909%3B match to protein family HMM TIGR00836;gbkey=CDS;gene=amt;product=ammonium transporter;protein_id=AEF85164.1;transl_table=11 CP001843.1 Genbank gene 652707 654314 . - . ID=gene615;Name=nifA_1;gbkey=Gene;gene=nifA_1;gene_biotype=protein_coding;locus_tag=TREPR_3511 CP001843.1 Genbank CDS 652707 654314 . - 0 ID=cds577;Parent=gene615;Dbxref=NCBI_GP:AEF85553.1;Name=AEF85553.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728;gbkey=CDS;gene=nifA_1;product=Nif-specific regulatory protein;protein_id=AEF85553.1;transl_table=11 CP001843.1 Genbank gene 654649 655356 . + . ID=gene616;Name=TREPR_3510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3510 CP001843.1 Genbank CDS 654649 655356 . + 0 ID=cds578;Parent=gene616;Dbxref=NCBI_GP:AEF86516.1;Name=AEF86516.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86516.1;transl_table=11 CP001843.1 Genbank gene 655418 656443 . + . ID=gene617;Name=TREPR_3509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3509 CP001843.1 Genbank CDS 655418 656443 . + 0 ID=cds579;Parent=gene617;Dbxref=NCBI_GP:AEF84518.1;Name=AEF84518.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84518.1;transl_table=11 CP001843.1 Genbank gene 656499 656822 . - . ID=gene618;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=TREPR_3508 CP001843.1 Genbank CDS 656499 656822 . - 0 ID=cds580;Parent=gene618;Dbxref=NCBI_GP:AEF85284.1;Name=AEF85284.1;Note=identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=AEF85284.1;transl_table=11 CP001843.1 Genbank gene 656917 657585 . - . ID=gene619;Name=TREPR_3507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3507 CP001843.1 Genbank CDS 656917 657585 . - 0 ID=cds581;Parent=gene619;Dbxref=NCBI_GP:AEF86066.1;Name=AEF86066.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=D-methionine transport system permease protein MetI;protein_id=AEF86066.1;transl_table=11 CP001843.1 Genbank gene 657572 658312 . - . ID=gene620;Name=TREPR_3506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3506 CP001843.1 Genbank CDS 657572 658312 . - 0 ID=cds582;Parent=gene620;Dbxref=NCBI_GP:AEF86888.1;Name=AEF86888.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=methionine import ATP-binding protein MetN;protein_id=AEF86888.1;transl_table=11 CP001843.1 Genbank gene 658473 659561 . - . ID=gene621;Name=TREPR_3505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3505 CP001843.1 Genbank CDS 658473 659561 . - 0 ID=cds583;Parent=gene621;Dbxref=NCBI_GP:AEF84555.1;Name=AEF84555.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01966;gbkey=CDS;product=response regulator;protein_id=AEF84555.1;transl_table=11 CP001843.1 Genbank gene 659551 662514 . - . ID=gene622;Name=TREPR_3504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3504 CP001843.1 Genbank CDS 659551 662514 . - 0 ID=cds584;Parent=gene622;Dbxref=NCBI_GP:AEF85638.1;Name=AEF85638.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=hybrid sensory kinase;protein_id=AEF85638.1;transl_table=11 CP001843.1 Genbank gene 662654 662770 . + . ID=gene623;Name=TREPR_3503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3503 CP001843.1 Genbank CDS 662654 662770 . + 0 ID=cds585;Parent=gene623;Dbxref=NCBI_GP:AEF86570.1;Name=AEF86570.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86570.1;transl_table=11 CP001843.1 Genbank gene 662828 663751 . + . ID=gene624;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=TREPR_3502 CP001843.1 Genbank CDS 662828 663751 . + 0 ID=cds586;Parent=gene624;Dbxref=NCBI_GP:AEF84086.1;Name=AEF84086.1;Note=identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670;gbkey=CDS;gene=pyrB;product=aspartate carbamoyltransferase;protein_id=AEF84086.1;transl_table=11 CP001843.1 Genbank gene 663753 664187 . + . ID=gene625;Name=TREPR_3501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3501 CP001843.1 Genbank CDS 663753 664187 . + 0 ID=cds587;Parent=gene625;Dbxref=NCBI_GP:AEF83863.1;Name=AEF83863.1;Note=identified by match to protein family HMM PF01948;gbkey=CDS;product=aspartate carbamoyltransferase%2C regulatory subunit;protein_id=AEF83863.1;transl_table=11 CP001843.1 Genbank gene 664230 665525 . + . ID=gene626;Name=TREPR_3500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3500 CP001843.1 Genbank CDS 664230 665525 . + 0 ID=cds588;Parent=gene626;Dbxref=NCBI_GP:AEF85401.1;Name=AEF85401.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00857;gbkey=CDS;product=dihydroorotase (DHOase);protein_id=AEF85401.1;transl_table=11 CP001843.1 Genbank gene 665529 666371 . + . ID=gene627;Name=TREPR_3499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3499 CP001843.1 Genbank CDS 665529 666371 . + 0 ID=cds589;Parent=gene627;Dbxref=NCBI_GP:AEF84205.1;Name=AEF84205.1;Note=identified by match to protein family HMM PF00175;gbkey=CDS;product=dihydroorotate dehydrogenase%2C electron transfer subunit;protein_id=AEF84205.1;transl_table=11 CP001843.1 Genbank gene 666368 667273 . + . ID=gene628;Name=TREPR_3498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3498 CP001843.1 Genbank CDS 666368 667273 . + 0 ID=cds590;Parent=gene628;Dbxref=NCBI_GP:AEF86712.1;Name=AEF86712.1;Note=identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037;gbkey=CDS;product=dihydroorotate dehydrogenase%2C catalytic subunit (dihydroorotate oxidase) (dhodehase) (dhodase) (dhod);protein_id=AEF86712.1;transl_table=11 CP001843.1 Genbank gene 667350 667940 . - . ID=gene629;Name=TREPR_3497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3497 CP001843.1 Genbank CDS 667350 667940 . - 0 ID=cds591;Parent=gene629;Dbxref=NCBI_GP:AEF85921.1;Name=AEF85921.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85921.1;transl_table=11 CP001843.1 Genbank gene 667972 668526 . - . ID=gene630;Name=TREPR_3496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3496 CP001843.1 Genbank CDS 667972 668526 . - 0 ID=cds592;Parent=gene630;Dbxref=NCBI_GP:AEF84710.1;Name=AEF84710.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84710.1;transl_table=11 CP001843.1 Genbank gene 668754 669677 . + . ID=gene631;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=TREPR_3494 CP001843.1 Genbank CDS 668754 669677 . + 0 ID=cds593;Parent=gene631;Dbxref=NCBI_GP:AEF86227.1;Name=AEF86227.1;Note=identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR02127;gbkey=CDS;gene=pyrF;product=orotidine 5'-phosphate decarboxylase;protein_id=AEF86227.1;transl_table=11 CP001843.1 Genbank gene 669717 670625 . - . ID=gene632;Name=TREPR_3493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3493 CP001843.1 Genbank CDS 669717 670625 . - 0 ID=cds594;Parent=gene632;Dbxref=NCBI_GP:AEF85441.1;Name=AEF85441.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=putative membrane protein;protein_id=AEF85441.1;transl_table=11 CP001843.1 Genbank gene 670612 671352 . + . ID=gene633;Name=TREPR_3492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3492 CP001843.1 Genbank CDS 670612 671352 . + 0 ID=cds595;Parent=gene633;Dbxref=NCBI_GP:AEF86296.1;Name=AEF86296.1;Note=identified by match to protein family HMM PF00857;gbkey=CDS;product=pyrazinamidase/nicotinamidase (PZAase)(Nicotine deamidase) (NAMase);protein_id=AEF86296.1;transl_table=11 CP001843.1 Genbank gene 671349 672797 . + . ID=gene634;Name=TREPR_3491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3491 CP001843.1 Genbank CDS 671349 672797 . + 0 ID=cds596;Parent=gene634;Dbxref=NCBI_GP:AEF84901.1;Name=AEF84901.1;Note=identified by match to protein family HMM PF04095%3B match to protein family HMM TIGR01513;gbkey=CDS;product=putative nicotinate phosphoribosyltransferase;protein_id=AEF84901.1;transl_table=11 CP001843.1 Genbank gene 672799 674508 . + . ID=gene635;Name=TREPR_3490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3490 CP001843.1 Genbank CDS 672799 674508 . + 0 ID=cds597;Parent=gene635;Dbxref=NCBI_GP:AEF86045.1;Name=AEF86045.1;Note=identified by match to protein family HMM PF00485;gbkey=CDS;product=phosphoribulokinase/uridine kinase family protein;protein_id=AEF86045.1;transl_table=11 CP001843.1 Genbank gene 674575 675885 . - . ID=gene636;Name=TREPR_3489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3489 CP001843.1 Genbank CDS 674575 675885 . - 0 ID=cds598;Parent=gene636;Dbxref=NCBI_GP:AEF83712.1;Name=AEF83712.1;Note=identified by match to protein family HMM PF01637%3B match to protein family HMM PF03008;gbkey=CDS;product=putative ATPase;protein_id=AEF83712.1;transl_table=11 CP001843.1 Genbank gene 675953 676912 . - . ID=gene637;Name=rluD_1;gbkey=Gene;gene=rluD_1;gene_biotype=protein_coding;locus_tag=TREPR_3488 CP001843.1 Genbank CDS 675953 676912 . - 0 ID=cds599;Parent=gene637;Dbxref=NCBI_GP:AEF86266.1;Name=AEF86266.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005;gbkey=CDS;gene=rluD_1;product=ribosomal large subunit pseudouridine synthase D;protein_id=AEF86266.1;transl_table=11 CP001843.1 Genbank gene 676912 677442 . - . ID=gene638;Name=TREPR_3487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3487 CP001843.1 Genbank CDS 676912 677442 . - 0 ID=cds600;Parent=gene638;Dbxref=NCBI_GP:AEF85648.1;Name=AEF85648.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85648.1;transl_table=11 CP001843.1 Genbank gene 677439 678134 . - . ID=gene639;Name=TREPR_3486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3486 CP001843.1 Genbank CDS 677439 678134 . - 0 ID=cds601;Parent=gene639;Dbxref=NCBI_GP:AEF85007.1;Name=AEF85007.1;Note=identified by match to protein family HMM PF01168%3B match to protein family HMM TIGR00044;gbkey=CDS;product=pyridoxal phosphate enzyme%2C YggS family;protein_id=AEF85007.1;transl_table=11 CP001843.1 Genbank gene 678112 679050 . - . ID=gene640;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=TREPR_3485 CP001843.1 Genbank CDS 678112 679050 . - 0 ID=cds602;Parent=gene640;Dbxref=NCBI_GP:AEF84119.1;Name=AEF84119.1;Note=identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755;gbkey=CDS;gene=ksgA;product=dimethyladenosine transferase;protein_id=AEF84119.1;transl_table=11 CP001843.1 Genbank gene 679034 680590 . - . ID=gene641;Name=TREPR_3484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3484 CP001843.1 Genbank CDS 679034 680590 . - 0 ID=cds603;Parent=gene641;Dbxref=NCBI_GP:AEF86992.1;Name=AEF86992.1;Note=identified by match to protein family HMM PF03772%3B match to protein family HMM TIGR00360;gbkey=CDS;product=putative ComE protein;protein_id=AEF86992.1;transl_table=11 CP001843.1 Genbank gene 680639 681685 . - . ID=gene642;Name=TREPR_3483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3483 CP001843.1 Genbank CDS 680639 681685 . - 0 ID=cds604;Parent=gene642;Dbxref=NCBI_GP:AEF85949.1;Name=AEF85949.1;Note=identified by match to protein family HMM PF07238;gbkey=CDS;product=type IV pilus assembly protein PilZ;protein_id=AEF85949.1;transl_table=11 CP001843.1 Genbank gene 681817 682491 . + . ID=gene643;Name=TREPR_3482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3482 CP001843.1 Genbank CDS 681817 682491 . + 0 ID=cds605;Parent=gene643;Dbxref=NCBI_GP:AEF86999.1;Name=AEF86999.1;Note=identified by match to protein family HMM PF02517;gbkey=CDS;product=caax amino protease family;protein_id=AEF86999.1;transl_table=11 CP001843.1 Genbank gene 682543 683055 . - . ID=gene644;Name=TREPR_3481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3481 CP001843.1 Genbank CDS 682543 683055 . - 0 ID=cds606;Parent=gene644;Dbxref=NCBI_GP:AEF85642.1;Name=AEF85642.1;gbkey=CDS;product=putative flagellar protein;protein_id=AEF85642.1;transl_table=11 CP001843.1 Genbank gene 683068 683865 . - . ID=gene645;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=TREPR_3480 CP001843.1 Genbank CDS 683068 683865 . - 0 ID=cds607;Parent=gene645;Dbxref=NCBI_GP:AEF84269.1;Name=AEF84269.1;Note=identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR02488%3B match to protein family HMM TIGR03506;gbkey=CDS;gene=flgG;product=flagellar basal-body rod protein FlgG;protein_id=AEF84269.1;transl_table=11 CP001843.1 Genbank gene 683881 684732 . - . ID=gene646;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=TREPR_3479 CP001843.1 Genbank CDS 683881 684732 . - 0 ID=cds608;Parent=gene646;Dbxref=NCBI_GP:AEF86335.1;Name=AEF86335.1;Note=identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR02490%3B match to protein family HMM TIGR03506;gbkey=CDS;gene=flgF;product=flagellar basal-body rod protein FlgF;protein_id=AEF86335.1;transl_table=11 CP001843.1 Genbank gene 684899 685195 . + . ID=gene647;Name=TREPR_3477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3477 CP001843.1 Genbank CDS 684899 685195 . + 0 ID=cds609;Parent=gene647;Dbxref=NCBI_GP:AEF85184.1;Name=AEF85184.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85184.1;transl_table=11 CP001843.1 Genbank gene 685197 685454 . + . ID=gene648;Name=TREPR_3476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3476 CP001843.1 Genbank CDS 685197 685454 . + 0 ID=cds610;Parent=gene648;Dbxref=NCBI_GP:AEF86022.1;Name=AEF86022.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86022.1;transl_table=11 CP001843.1 Genbank gene 685480 685842 . - . ID=gene649;Name=TREPR_3475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3475 CP001843.1 Genbank CDS 685480 685842 . - 0 ID=cds611;Parent=gene649;Dbxref=NCBI_GP:AEF84865.1;Name=AEF84865.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=transcriptional regulator;protein_id=AEF84865.1;transl_table=11 CP001843.1 Genbank gene 685937 686149 . + . ID=gene650;Name=TREPR_3474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3474 CP001843.1 Genbank CDS 685937 686149 . + 0 ID=cds612;Parent=gene650;Dbxref=NCBI_GP:AEF83528.1;Name=AEF83528.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83528.1;transl_table=11 CP001843.1 Genbank gene 686215 687849 . + . ID=gene651;Name=TREPR_3473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3473 CP001843.1 Genbank CDS 686215 687849 . + 0 ID=cds613;Parent=gene651;Dbxref=NCBI_GP:AEF87040.1;Name=AEF87040.1;gbkey=CDS;product=putative cell wall/surface repeat protein;protein_id=AEF87040.1;transl_table=11 CP001843.1 Genbank gene 687869 690157 . + . ID=gene652;Name=TREPR_3472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3472 CP001843.1 Genbank CDS 687869 690157 . + 0 ID=cds614;Parent=gene652;Dbxref=NCBI_GP:AEF84537.1;Name=AEF84537.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84537.1;transl_table=11 CP001843.1 Genbank gene 690256 690429 . - . ID=gene653;Name=TREPR_3471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3471 CP001843.1 Genbank CDS 690256 690429 . - 0 ID=cds615;Parent=gene653;Dbxref=NCBI_GP:AEF84532.1;Name=AEF84532.1;Note=identified by match to protein family HMM PF07927;gbkey=CDS;product=conserved domain protein;protein_id=AEF84532.1;transl_table=11 CP001843.1 Genbank gene 690426 690602 . - . ID=gene654;Name=TREPR_3470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3470 CP001843.1 Genbank CDS 690426 690602 . - 0 ID=cds616;Parent=gene654;Dbxref=NCBI_GP:AEF84049.1;Name=AEF84049.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84049.1;transl_table=11 CP001843.1 Genbank gene 690794 692044 . + . ID=gene655;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=TREPR_3469 CP001843.1 Genbank CDS 690794 692044 . + 0 ID=cds617;Parent=gene655;Dbxref=NCBI_GP:AEF86501.1;Name=AEF86501.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00234;gbkey=CDS;gene=tyrS;product=tyrosine--tRNA ligase;protein_id=AEF86501.1;transl_table=11 CP001843.1 Genbank gene 692149 693768 . - . ID=gene656;Name=mviN;gbkey=Gene;gene=mviN;gene_biotype=protein_coding;locus_tag=TREPR_3468 CP001843.1 Genbank CDS 692149 693768 . - 0 ID=cds618;Parent=gene656;Dbxref=NCBI_GP:AEF86035.1;Name=AEF86035.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM PF03023%3B match to protein family HMM TIGR01695;gbkey=CDS;gene=mviN;product=integral membrane protein MviN;protein_id=AEF86035.1;transl_table=11 CP001843.1 Genbank gene 693867 695330 . - . ID=gene657;Name=TREPR_3467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3467 CP001843.1 Genbank CDS 693867 695330 . - 0 ID=cds619;Parent=gene657;Dbxref=NCBI_GP:AEF84988.1;Name=AEF84988.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01317;gbkey=CDS;product=glutamate synthase [NADH] (nadh-gogat);protein_id=AEF84988.1;transl_table=11 CP001843.1 Genbank gene 695471 700210 . - . ID=gene658;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=TREPR_3466 CP001843.1 Genbank CDS 695471 700210 . - 0 ID=cds620;Parent=gene658;Dbxref=NCBI_GP:AEF86357.1;Name=AEF86357.1;Note=identified by match to protein family HMM PF00310%3B match to protein family HMM PF01493%3B match to protein family HMM PF01645%3B match to protein family HMM PF04898;gbkey=CDS;gene=gltB;product=glutamate synthase%2C large subunit;protein_id=AEF86357.1;transl_table=11 CP001843.1 Genbank gene 700784 702349 . - . ID=gene659;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=TREPR_3465 CP001843.1 Genbank CDS 700784 702349 . - 0 ID=cds621;Parent=gene659;Dbxref=NCBI_GP:AEF83842.1;Name=AEF83842.1;Note=identified by match to protein family HMM PF03063%3B match to protein family HMM TIGR01703;gbkey=CDS;gene=hcp;product=hydroxylamine reductase;protein_id=AEF83842.1;transl_table=11 CP001843.1 Genbank gene 702582 703439 . - . ID=gene660;Name=TREPR_3463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3463 CP001843.1 Genbank CDS 702582 703439 . - 0 ID=cds622;Parent=gene660;Dbxref=NCBI_GP:AEF85394.1;Name=AEF85394.1;Note=identified by match to protein family HMM PF02086%3B match to protein family HMM TIGR00571;gbkey=CDS;product=modification methylase lladchia (adenine-specificmethyltransferase lladchia) (m.lladchia) (m.lladchi a) (m.llaii a);protein_id=AEF85394.1;transl_table=11 CP001843.1 Genbank gene 703411 703854 . - . ID=gene661;Name=TREPR_3462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3462 CP001843.1 Genbank CDS 703411 703854 . - 0 ID=cds623;Parent=gene661;Dbxref=NCBI_GP:AEF84152.1;Name=AEF84152.1;Note=identified by match to protein family HMM PF05168;gbkey=CDS;product=hepn domain protein;protein_id=AEF84152.1;transl_table=11 CP001843.1 Genbank gene 703844 704167 . - . ID=gene662;Name=TREPR_3461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3461 CP001843.1 Genbank CDS 703844 704167 . - 0 ID=cds624;Parent=gene662;Dbxref=NCBI_GP:AEF83824.1;Name=AEF83824.1;Note=identified by match to protein family HMM PF01909;gbkey=CDS;product=DNA polymerase%2C beta domain protein region;protein_id=AEF83824.1;transl_table=11 CP001843.1 Genbank gene 704193 705353 . - . ID=gene663;Name=TREPR_3460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3460 CP001843.1 Genbank CDS 704193 705353 . - 0 ID=cds625;Parent=gene663;Dbxref=NCBI_GP:AEF85639.1;Name=AEF85639.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF00248;gbkey=CDS;product=aldo/keto reductase;protein_id=AEF85639.1;transl_table=11 CP001843.1 Genbank gene 705393 706082 . - . ID=gene664;Name=TREPR_3459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3459 CP001843.1 Genbank CDS 705393 706082 . - 0 ID=cds626;Parent=gene664;Dbxref=NCBI_GP:AEF86564.1;Name=AEF86564.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86564.1;transl_table=11 CP001843.1 Genbank gene 706161 707738 . - . ID=gene665;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=TREPR_3458 CP001843.1 Genbank CDS 706161 707738 . - 0 ID=cds627;Parent=gene665;Dbxref=NCBI_GP:AEF83594.1;Name=AEF83594.1;Note=identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813%3B match to protein family HMM TIGR02121;gbkey=CDS;gene=putP;product=sodium/proline symporter;protein_id=AEF83594.1;transl_table=11 CP001843.1 Genbank gene 707961 708035 . + . ID=gene666;Name=TREPR_3949;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3949 CP001843.1 Genbank tRNA 707961 708035 . + . ID=rna14;Parent=gene666;gbkey=tRNA;product=tRNA-Asp CP001843.1 Genbank exon 707961 708035 . + . ID=id18;Parent=rna14;gbkey=tRNA;product=tRNA-Asp CP001843.1 Genbank gene 708068 708143 . + . ID=gene667;Name=TREPR_3948;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3948 CP001843.1 Genbank tRNA 708068 708143 . + . ID=rna15;Parent=gene667;gbkey=tRNA;product=tRNA-Pro CP001843.1 Genbank exon 708068 708143 . + . ID=id19;Parent=rna15;gbkey=tRNA;product=tRNA-Pro CP001843.1 Genbank gene 708812 709105 . + . ID=gene668;Name=TREPR_3455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3455 CP001843.1 Genbank CDS 708812 709105 . + 0 ID=cds628;Parent=gene668;Dbxref=NCBI_GP:AEF84567.1;Name=AEF84567.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84567.1;transl_table=11 CP001843.1 Genbank gene 709137 709496 . - . ID=gene669;Name=TREPR_3454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3454 CP001843.1 Genbank CDS 709137 709496 . - 0 ID=cds629;Parent=gene669;Dbxref=NCBI_GP:AEF86341.1;Name=AEF86341.1;Note=identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090;gbkey=CDS;product=iojap family protein;protein_id=AEF86341.1;transl_table=11 CP001843.1 Genbank gene 709471 710691 . - . ID=gene670;Name=TREPR_3453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3453 CP001843.1 Genbank CDS 709471 710691 . - 0 ID=cds630;Parent=gene670;Dbxref=NCBI_GP:AEF86854.1;Name=AEF86854.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86854.1;transl_table=11 CP001843.1 Genbank gene 710688 711857 . - . ID=gene671;Name=TREPR_3452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3452 CP001843.1 Genbank CDS 710688 711857 . - 0 ID=cds631;Parent=gene671;Dbxref=NCBI_GP:AEF84329.1;Name=AEF84329.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482%3B match to protein family HMM TIGR00488;gbkey=CDS;product=nicotinate;protein_id=AEF84329.1;transl_table=11 CP001843.1 Genbank gene 711861 712910 . - . ID=gene672;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=TREPR_3451 CP001843.1 Genbank CDS 711861 712910 . - 0 ID=cds632;Parent=gene672;Dbxref=NCBI_GP:AEF84857.1;Name=AEF84857.1;Note=identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM TIGR02729;gbkey=CDS;gene=cgtA;product=Obg family GTPase CgtA;protein_id=AEF84857.1;transl_table=11 CP001843.1 Genbank gene 713011 713295 . - . ID=gene673;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=TREPR_3450 CP001843.1 Genbank CDS 713011 713295 . - 0 ID=cds633;Parent=gene673;Dbxref=NCBI_GP:AEF86819.1;Name=AEF86819.1;Note=identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062;gbkey=CDS;gene=rpmA;product=ribosomal protein L27;protein_id=AEF86819.1;transl_table=11 CP001843.1 Genbank gene 713297 713638 . - . ID=gene674;Name=TREPR_3449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3449 CP001843.1 Genbank CDS 713297 713638 . - 0 ID=cds634;Parent=gene674;Dbxref=NCBI_GP:AEF86933.1;Name=AEF86933.1;Note=identified by match to protein family HMM PF04327;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86933.1;transl_table=11 CP001843.1 Genbank gene 713644 713976 . - . ID=gene675;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=TREPR_3448 CP001843.1 Genbank CDS 713644 713976 . - 0 ID=cds635;Parent=gene675;Dbxref=NCBI_GP:AEF83784.1;Name=AEF83784.1;Note=identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061;gbkey=CDS;gene=rplU;product=ribosomal protein L21;protein_id=AEF83784.1;transl_table=11 CP001843.1 Genbank gene 714305 715453 . + . ID=gene676;Name=TREPR_3446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3446 CP001843.1 Genbank CDS 714305 715453 . + 0 ID=cds636;Parent=gene676;Dbxref=NCBI_GP:AEF85916.1;Name=AEF85916.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C family 2;protein_id=AEF85916.1;transl_table=11 CP001843.1 Genbank gene 715477 716232 . + . ID=gene677;Name=TREPR_3445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3445 CP001843.1 Genbank CDS 715477 716232 . + 0 ID=cds637;Parent=gene677;Dbxref=NCBI_GP:AEF85049.1;Name=AEF85049.1;Note=identified by match to protein family HMM PF01553;gbkey=CDS;product=acyltransferase domain protein;protein_id=AEF85049.1;transl_table=11 CP001843.1 Genbank gene 716229 717587 . + . ID=gene678;Name=TREPR_3444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3444 CP001843.1 Genbank CDS 716229 717587 . + 0 ID=cds638;Parent=gene678;Dbxref=NCBI_GP:AEF86827.1;Name=AEF86827.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF86827.1;transl_table=11 CP001843.1 Genbank gene 717595 719424 . - . ID=gene679;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=TREPR_3443 CP001843.1 Genbank CDS 717595 719424 . - 0 ID=cds639;Parent=gene679;Dbxref=NCBI_GP:AEF86097.1;Name=AEF86097.1;Note=identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456;gbkey=CDS;gene=argS;product=arginine--tRNA ligase;protein_id=AEF86097.1;transl_table=11 CP001843.1 Genbank gene 719436 720206 . - . ID=gene680;Name=TREPR_3442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3442 CP001843.1 Genbank CDS 719436 720206 . - 0 ID=cds640;Parent=gene680;Dbxref=NCBI_GP:AEF85484.1;Name=AEF85484.1;Note=identified by match to protein family HMM PF02578%3B match to protein family HMM TIGR00726;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85484.1;transl_table=11 CP001843.1 Genbank gene 720203 721933 . - . ID=gene681;Name=TREPR_3441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3441 CP001843.1 Genbank CDS 720203 721933 . - 0 ID=cds641;Parent=gene681;Dbxref=NCBI_GP:AEF84711.1;Name=AEF84711.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84711.1;transl_table=11 CP001843.1 Genbank gene 722283 722354 . - . ID=gene682;Name=TREPR_3947;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3947 CP001843.1 Genbank tRNA 722283 722354 . - . ID=rna16;Parent=gene682;gbkey=tRNA;product=tRNA-Glu CP001843.1 Genbank exon 722283 722354 . - . ID=id20;Parent=rna16;gbkey=tRNA;product=tRNA-Glu CP001843.1 Genbank gene 722504 722917 . - . ID=gene683;Name=TREPR_3439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3439 CP001843.1 Genbank CDS 722504 722917 . - 0 ID=cds642;Parent=gene683;Dbxref=NCBI_GP:AEF84832.1;Name=AEF84832.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84832.1;transl_table=11 CP001843.1 Genbank gene 722917 723480 . - . ID=gene684;Name=TREPR_3438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3438 CP001843.1 Genbank CDS 722917 723480 . - 0 ID=cds643;Parent=gene684;Dbxref=NCBI_GP:AEF85862.1;Name=AEF85862.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85862.1;transl_table=11 CP001843.1 Genbank gene 723789 723938 . - . ID=gene685;Name=TREPR_3436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3436 CP001843.1 Genbank CDS 723789 723938 . - 0 ID=cds644;Parent=gene685;Dbxref=NCBI_GP:AEF84274.1;Name=AEF84274.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84274.1;transl_table=11 CP001843.1 Genbank gene 724471 724541 . - . ID=gene686;Name=TREPR_3946;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3946 CP001843.1 Genbank tRNA 724471 724541 . - . ID=rna17;Parent=gene686;gbkey=tRNA;product=tRNA-Gln CP001843.1 Genbank exon 724471 724541 . - . ID=id21;Parent=rna17;gbkey=tRNA;product=tRNA-Gln CP001843.1 Genbank gene 724640 725137 . + . ID=gene687;Name=TREPR_3434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3434 CP001843.1 Genbank CDS 724640 725137 . + 0 ID=cds645;Parent=gene687;Dbxref=NCBI_GP:AEF85257.1;Name=AEF85257.1;Note=identified by match to protein family HMM PF00877;gbkey=CDS;product=NlpC (ORF-17);protein_id=AEF85257.1;transl_table=11 CP001843.1 Genbank gene 725162 725893 . - . ID=gene688;Name=TREPR_3433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3433 CP001843.1 Genbank CDS 725162 725893 . - 0 ID=cds646;Parent=gene688;Dbxref=NCBI_GP:AEF85680.1;Name=AEF85680.1;Note=identified by match to protein family HMM PF02678;gbkey=CDS;product=pirin domain protein;protein_id=AEF85680.1;transl_table=11 CP001843.1 Genbank gene 726072 726605 . - . ID=gene689;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=TREPR_3432 CP001843.1 Genbank CDS 726072 726605 . - 0 ID=cds647;Parent=gene689;Dbxref=NCBI_GP:AEF86327.1;Name=AEF86327.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01090;gbkey=CDS;gene=apt;product=adenine phosphoribosyltransferase;protein_id=AEF86327.1;transl_table=11 CP001843.1 Genbank gene 726730 727269 . + . ID=gene690;Name=TREPR_3431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3431 CP001843.1 Genbank CDS 726730 727269 . + 0 ID=cds648;Parent=gene690;Dbxref=NCBI_GP:AEF83669.1;Name=AEF83669.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83669.1;transl_table=11 CP001843.1 Genbank gene 727450 728355 . + . ID=gene691;Name=TREPR_3430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3430 CP001843.1 Genbank CDS 727450 728355 . + 0 ID=cds649;Parent=gene691;Dbxref=NCBI_GP:AEF84446.1;Name=AEF84446.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=response regulator receiver modulated diguanylate cyclase;protein_id=AEF84446.1;transl_table=11 CP001843.1 Genbank gene 728520 729053 . - . ID=gene692;Name=TREPR_3429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3429 CP001843.1 Genbank CDS 728520 729053 . - 0 ID=cds650;Parent=gene692;Dbxref=NCBI_GP:AEF84919.1;Name=AEF84919.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84919.1;transl_table=11 CP001843.1 Genbank gene 729607 729867 . + . ID=gene693;Name=TREPR_3428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3428 CP001843.1 Genbank CDS 729607 729867 . + 0 ID=cds651;Parent=gene693;Dbxref=NCBI_GP:AEF86165.1;Name=AEF86165.1;Note=identified by match to protein family HMM TIGR01552;gbkey=CDS;product=putative prevent-host-death family protein;protein_id=AEF86165.1;transl_table=11 CP001843.1 Genbank gene 729873 730307 . + . ID=gene694;Name=TREPR_3427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3427 CP001843.1 Genbank CDS 729873 730307 . + 0 ID=cds652;Parent=gene694;Dbxref=NCBI_GP:AEF84556.1;Name=AEF84556.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=PIN domain protein;protein_id=AEF84556.1;transl_table=11 CP001843.1 Genbank gene 730323 731312 . - . ID=gene695;Name=TREPR_3426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3426 CP001843.1 Genbank CDS 730323 731312 . - 0 ID=cds653;Parent=gene695;Dbxref=NCBI_GP:AEF85985.1;Name=AEF85985.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF85985.1;transl_table=11 CP001843.1 Genbank gene 731422 731757 . + . ID=gene696;Name=TREPR_3425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3425 CP001843.1 Genbank CDS 731422 731757 . + 0 ID=cds654;Parent=gene696;Dbxref=NCBI_GP:AEF85451.1;Name=AEF85451.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85451.1;transl_table=11 CP001843.1 Genbank gene 731754 732314 . + . ID=gene697;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=TREPR_3424 CP001843.1 Genbank CDS 731754 732314 . + 0 ID=cds655;Parent=gene697;Dbxref=NCBI_GP:AEF86229.1;Name=AEF86229.1;Note=identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937;gbkey=CDS;gene=rpoE;product=RNA polymerase sigma-E factor;protein_id=AEF86229.1;transl_table=11 CP001843.1 Genbank gene 732311 732784 . + . ID=gene698;Name=TREPR_3423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3423 CP001843.1 Genbank CDS 732311 732784 . + 0 ID=cds656;Parent=gene698;Dbxref=NCBI_GP:AEF83885.1;Name=AEF83885.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83885.1;transl_table=11 CP001843.1 Genbank gene 732798 733028 . + . ID=gene699;Name=TREPR_3422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3422 CP001843.1 Genbank CDS 732798 733028 . + 0 ID=cds657;Parent=gene699;Dbxref=NCBI_GP:AEF84656.1;Name=AEF84656.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=conserved domain protein;protein_id=AEF84656.1;transl_table=11 CP001843.1 Genbank gene 733025 734155 . + . ID=gene700;Name=vorB;gbkey=Gene;gene=vorB;gene_biotype=protein_coding;locus_tag=TREPR_3421 CP001843.1 Genbank CDS 733025 734155 . + 0 ID=cds658;Parent=gene700;Dbxref=NCBI_GP:AEF85908.1;Name=AEF85908.1;Note=identified by match to protein family HMM PF01855%3B match to protein family HMM PF02780;gbkey=CDS;gene=vorB;product=2-oxoglutarate oxidoreductase%2C alpha subunit;protein_id=AEF85908.1;transl_table=11 CP001843.1 Genbank gene 734152 734931 . + . ID=gene701;Name=TREPR_3420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3420 CP001843.1 Genbank CDS 734152 734931 . + 0 ID=cds659;Parent=gene701;Dbxref=NCBI_GP:AEF85594.1;Name=AEF85594.1;Note=identified by match to protein family HMM PF02775;gbkey=CDS;product=2-oxoglutarate oxidoreductase%2C beta subunit;protein_id=AEF85594.1;transl_table=11 CP001843.1 Genbank gene 734931 735464 . + . ID=gene702;Name=TREPR_3419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3419 CP001843.1 Genbank CDS 734931 735464 . + 0 ID=cds660;Parent=gene702;Dbxref=NCBI_GP:AEF84370.1;Name=AEF84370.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;product=ketoisovalerate oxidoreductase subunit VorA (VOR) (2-oxoisovalerate oxidoreductase alpha chain) (2-oxoisovalerateferredoxin reductase subunit alpha);protein_id=AEF84370.1;transl_table=11 CP001843.1 Genbank gene 735517 735852 . - . ID=gene703;Name=TREPR_3418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3418 CP001843.1 Genbank CDS 735517 735852 . - 0 ID=cds661;Parent=gene703;Dbxref=NCBI_GP:AEF84873.1;Name=AEF84873.1;gbkey=CDS;product=putative transcriptional regulator;protein_id=AEF84873.1;transl_table=11 CP001843.1 Genbank gene 735849 736199 . - . ID=gene704;Name=TREPR_3417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3417 CP001843.1 Genbank CDS 735849 736199 . - 0 ID=cds662;Parent=gene704;Dbxref=NCBI_GP:AEF87006.1;Name=AEF87006.1;gbkey=CDS;product=toxin HigB-2;protein_id=AEF87006.1;transl_table=11 CP001843.1 Genbank gene 736398 737135 . - . ID=gene705;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=TREPR_3416 CP001843.1 Genbank CDS 736398 737135 . - 0 ID=cds663;Parent=gene705;Dbxref=NCBI_GP:AEF85946.1;Name=AEF85946.1;Note=identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126;gbkey=CDS;gene=deoC;product=deoxyribose-phosphate aldolase;protein_id=AEF85946.1;transl_table=11 CP001843.1 Genbank gene 737246 738193 . + . ID=gene706;Name=TREPR_3415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3415 CP001843.1 Genbank CDS 737246 738193 . + 0 ID=cds664;Parent=gene706;Dbxref=NCBI_GP:AEF83573.1;Name=AEF83573.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83573.1;transl_table=11 CP001843.1 Genbank gene 738321 739589 . + . ID=gene707;Name=TREPR_3414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3414 CP001843.1 Genbank CDS 738321 739589 . + 0 ID=cds665;Parent=gene707;Dbxref=NCBI_GP:AEF86434.1;Name=AEF86434.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86434.1;transl_table=11 CP001843.1 Genbank pseudogene 739603 743517 . + . ID=gene708;Name=TREPR_3413;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3413;pseudo=true CP001843.1 Genbank gene 743514 746525 . + . ID=gene709;Name=TREPR_3412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3412 CP001843.1 Genbank CDS 743514 746525 . + 0 ID=cds666;Parent=gene709;Dbxref=NCBI_GP:AEF84430.1;Name=AEF84430.1;gbkey=CDS;product=sperm-activating peptides family;protein_id=AEF84430.1;transl_table=11 CP001843.1 Genbank gene 746631 748520 . + . ID=gene710;Name=TREPR_3411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3411 CP001843.1 Genbank CDS 746631 748520 . + 0 ID=cds667;Parent=gene710;Dbxref=NCBI_GP:AEF84172.1;Name=AEF84172.1;Note=identified by match to protein family HMM PF00211%3B match to protein family HMM PF00672;gbkey=CDS;product=adenylate cyclase;protein_id=AEF84172.1;transl_table=11 CP001843.1 Genbank gene 748513 751584 . + . ID=gene711;Name=TREPR_3410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3410 CP001843.1 Genbank CDS 748513 751584 . + 0 ID=cds668;Parent=gene711;Dbxref=NCBI_GP:AEF86882.1;Name=AEF86882.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86882.1;transl_table=11 CP001843.1 Genbank gene 751574 752755 . + . ID=gene712;Name=TREPR_3408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3408 CP001843.1 Genbank CDS 751574 752755 . + 0 ID=cds669;Parent=gene712;Dbxref=NCBI_GP:AEF83907.1;Name=AEF83907.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83907.1;transl_table=11 CP001843.1 Genbank gene 752752 753087 . - . ID=gene713;Name=TREPR_3409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3409 CP001843.1 Genbank CDS 752752 753087 . - 0 ID=cds670;Parent=gene713;Dbxref=NCBI_GP:AEF84618.1;Name=AEF84618.1;Note=identified by match to protein family HMM PF01035;gbkey=CDS;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=AEF84618.1;transl_table=11 CP001843.1 Genbank gene 753509 756088 . + . ID=gene714;Name=TREPR_3406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3406 CP001843.1 Genbank CDS 753509 756088 . + 0 ID=cds671;Parent=gene714;Dbxref=NCBI_GP:AEF83674.1;Name=AEF83674.1;Note=identified by match to protein family HMM PF00196;gbkey=CDS;product=transcriptional regulator%2C LuxR family protein;protein_id=AEF83674.1;transl_table=11 CP001843.1 Genbank gene 756145 758619 . + . ID=gene715;Name=TREPR_3405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3405 CP001843.1 Genbank CDS 756145 758619 . + 0 ID=cds672;Parent=gene715;Dbxref=NCBI_GP:AEF86147.1;Name=AEF86147.1;Note=identified by match to protein family HMM PF00196;gbkey=CDS;product=putative transcriptional regulator;protein_id=AEF86147.1;transl_table=11 CP001843.1 Genbank gene 758820 760298 . + . ID=gene716;Name=TREPR_3404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3404 CP001843.1 Genbank CDS 758820 760298 . + 0 ID=cds673;Parent=gene716;Dbxref=NCBI_GP:AEF86717.1;Name=AEF86717.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=transcriptional regulator%2C AraC family;protein_id=AEF86717.1;transl_table=11 CP001843.1 Genbank gene 760303 761916 . + . ID=gene717;Name=TREPR_3403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3403 CP001843.1 Genbank CDS 760303 761916 . + 0 ID=cds674;Parent=gene717;Dbxref=NCBI_GP:AEF86346.1;Name=AEF86346.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;product=transcriptional regulator%2C AraC family;protein_id=AEF86346.1;transl_table=11 CP001843.1 Genbank gene 761943 762581 . + . ID=gene718;Name=TREPR_3402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3402 CP001843.1 Genbank CDS 761943 762581 . + 0 ID=cds675;Parent=gene718;Dbxref=NCBI_GP:AEF85163.1;Name=AEF85163.1;Note=identified by match to protein family HMM PF02310%3B match to protein family HMM PF02607;gbkey=CDS;product=cobalamin B12-binding domain protein;protein_id=AEF85163.1;transl_table=11 CP001843.1 Genbank gene 762653 765697 . + . ID=gene719;Name=TREPR_3401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3401 CP001843.1 Genbank CDS 762653 765697 . + 0 ID=cds676;Parent=gene719;Dbxref=NCBI_GP:AEF85963.1;Name=AEF85963.1;gbkey=CDS;product=putative trep;protein_id=AEF85963.1;transl_table=11 CP001843.1 Genbank gene 765756 767576 . + . ID=gene720;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=TREPR_3399 CP001843.1 Genbank CDS 765756 767576 . + 0 ID=cds677;Parent=gene720;Dbxref=NCBI_GP:AEF83965.1;Name=AEF83965.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393;gbkey=CDS;gene=lepA;product=GTP-binding protein LepA;protein_id=AEF83965.1;transl_table=11 CP001843.1 Genbank gene 767738 771766 . + . ID=gene721;Name=TREPR_3398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3398 CP001843.1 Genbank CDS 767738 771766 . + 0 ID=cds678;Parent=gene721;Dbxref=NCBI_GP:AEF85185.1;Name=AEF85185.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85185.1;transl_table=11 CP001843.1 Genbank gene 771777 772859 . + . ID=gene722;Name=TREPR_3397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3397 CP001843.1 Genbank CDS 771777 772859 . + 0 ID=cds679;Parent=gene722;Dbxref=NCBI_GP:AEF85395.1;Name=AEF85395.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85395.1;transl_table=11 CP001843.1 Genbank gene 772934 773953 . - . ID=gene723;Name=TREPR_3396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3396 CP001843.1 Genbank CDS 772934 773953 . - 0 ID=cds680;Parent=gene723;Dbxref=NCBI_GP:AEF86119.1;Name=AEF86119.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86119.1;transl_table=11 CP001843.1 Genbank gene 774327 775523 . + . ID=gene724;Name=TREPR_3394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3394 CP001843.1 Genbank CDS 774327 775523 . + 0 ID=cds681;Parent=gene724;Dbxref=NCBI_GP:AEF84142.1;Name=AEF84142.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84142.1;transl_table=11 CP001843.1 Genbank gene 775548 775973 . + . ID=gene725;Name=TREPR_3393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3393 CP001843.1 Genbank CDS 775548 775973 . + 0 ID=cds682;Parent=gene725;Dbxref=NCBI_GP:AEF84903.1;Name=AEF84903.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84903.1;transl_table=11 CP001843.1 Genbank gene 775987 776970 . + . ID=gene726;Name=TREPR_3391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3391 CP001843.1 Genbank CDS 775987 776970 . + 0 ID=cds683;Parent=gene726;Dbxref=NCBI_GP:AEF86316.1;Name=AEF86316.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86316.1;transl_table=11 CP001843.1 Genbank gene 776967 778637 . - . ID=gene727;Name=TREPR_3392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3392 CP001843.1 Genbank CDS 776967 778637 . - 0 ID=cds684;Parent=gene727;Dbxref=NCBI_GP:AEF85528.1;Name=AEF85528.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85528.1;transl_table=11 CP001843.1 Genbank gene 778641 780185 . - . ID=gene728;Name=TREPR_3390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3390 CP001843.1 Genbank CDS 778641 780185 . - 0 ID=cds685;Parent=gene728;Dbxref=NCBI_GP:AEF83746.1;Name=AEF83746.1;Note=identified by match to protein family HMM PF00639;gbkey=CDS;product=ppic-type ppiase domain protein;protein_id=AEF83746.1;transl_table=11 CP001843.1 Genbank gene 780483 781568 . + . ID=gene729;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=TREPR_3389 CP001843.1 Genbank CDS 780483 781568 . + 0 ID=cds686;Parent=gene729;Dbxref=NCBI_GP:AEF84300.1;Name=AEF84300.1;Note=identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01123;gbkey=CDS;gene=ilvE;product=branched-chain-amino-acid transaminase;protein_id=AEF84300.1;transl_table=11 CP001843.1 Genbank gene 781590 782885 . + . ID=gene730;Name=TREPR_3388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3388 CP001843.1 Genbank CDS 781590 782885 . + 0 ID=cds687;Parent=gene730;Dbxref=NCBI_GP:AEF85091.1;Name=AEF85091.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85091.1;transl_table=11 CP001843.1 Genbank gene 782891 784114 . - . ID=gene731;Name=TREPR_3387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3387 CP001843.1 Genbank CDS 782891 784114 . - 0 ID=cds688;Parent=gene731;Dbxref=NCBI_GP:AEF86602.1;Name=AEF86602.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C family 2;protein_id=AEF86602.1;transl_table=11 CP001843.1 Genbank gene 784157 784229 . + . ID=gene732;Name=TREPR_3945;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3945 CP001843.1 Genbank tRNA 784157 784229 . + . ID=rna18;Parent=gene732;gbkey=tRNA;product=tRNA-Ala CP001843.1 Genbank exon 784157 784229 . + . ID=id22;Parent=rna18;gbkey=tRNA;product=tRNA-Ala CP001843.1 Genbank gene 784361 784609 . + . ID=gene733;Name=TREPR_3384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3384 CP001843.1 Genbank CDS 784361 784609 . + 0 ID=cds689;Parent=gene733;Dbxref=NCBI_GP:AEF84005.1;Name=AEF84005.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84005.1;transl_table=11 CP001843.1 Genbank gene 784695 785246 . - . ID=gene734;Name=TREPR_3383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3383 CP001843.1 Genbank CDS 784695 785246 . - 0 ID=cds690;Parent=gene734;Dbxref=NCBI_GP:AEF86958.1;Name=AEF86958.1;Note=identified by match to protein family HMM PF02417%3B overlaps another CDS with the same product name;gbkey=CDS;product=chromate transport protein;protein_id=AEF86958.1;transl_table=11 CP001843.1 Genbank gene 785243 785812 . - . ID=gene735;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=TREPR_3382 CP001843.1 Genbank CDS 785243 785812 . - 0 ID=cds691;Parent=gene735;Dbxref=NCBI_GP:AEF86742.1;Name=AEF86742.1;Note=identified by match to protein family HMM PF02417%3B overlaps another CDS with the same product name;gbkey=CDS;gene=chrA;product=chromate transport protein;protein_id=AEF86742.1;transl_table=11 CP001843.1 Genbank gene 785892 787748 . - . ID=gene736;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=TREPR_3381 CP001843.1 Genbank CDS 785892 787748 . - 0 ID=cds692;Parent=gene736;Dbxref=NCBI_GP:AEF86430.1;Name=AEF86430.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459;gbkey=CDS;gene=aspS;product=aspartate--tRNA ligase;protein_id=AEF86430.1;transl_table=11 CP001843.1 Genbank gene 787773 787889 . - . ID=gene737;Name=TREPR_3380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3380 CP001843.1 Genbank CDS 787773 787889 . - 0 ID=cds693;Parent=gene737;Dbxref=NCBI_GP:AEF85645.1;Name=AEF85645.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85645.1;transl_table=11 CP001843.1 Genbank gene 788087 788392 . + . ID=gene738;Name=TREPR_3379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3379 CP001843.1 Genbank CDS 788087 788392 . + 0 ID=cds694;Parent=gene738;Dbxref=NCBI_GP:AEF83668.1;Name=AEF83668.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83668.1;transl_table=11 CP001843.1 Genbank gene 788439 789641 . - . ID=gene739;Name=TREPR_3378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3378 CP001843.1 Genbank CDS 788439 789641 . - 0 ID=cds695;Parent=gene739;Dbxref=NCBI_GP:AEF86996.1;Name=AEF86996.1;Note=identified by match to protein family HMM PF00691;gbkey=CDS;product=OmpA family protein;protein_id=AEF86996.1;transl_table=11 CP001843.1 Genbank gene 789676 789819 . + . ID=gene740;Name=TREPR_3377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3377 CP001843.1 Genbank CDS 789676 789819 . + 0 ID=cds696;Parent=gene740;Dbxref=NCBI_GP:AEF86071.1;Name=AEF86071.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86071.1;transl_table=11 CP001843.1 Genbank gene 789876 790367 . + . ID=gene741;Name=TREPR_3376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3376 CP001843.1 Genbank CDS 789876 790367 . + 0 ID=cds697;Parent=gene741;Dbxref=NCBI_GP:AEF86829.1;Name=AEF86829.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86829.1;transl_table=11 CP001843.1 Genbank gene 790529 791476 . + . ID=gene742;Name=TREPR_3375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3375 CP001843.1 Genbank CDS 790529 791476 . + 0 ID=cds698;Parent=gene742;Dbxref=NCBI_GP:AEF86111.1;Name=AEF86111.1;Note=identified by match to protein family HMM PF00313;gbkey=CDS;product=cold shock protein;protein_id=AEF86111.1;transl_table=11 CP001843.1 Genbank gene 791491 792660 . - . ID=gene743;Name=TREPR_3374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3374 CP001843.1 Genbank CDS 791491 792660 . - 0 ID=cds699;Parent=gene743;Dbxref=NCBI_GP:AEF86861.1;Name=AEF86861.1;Note=identified by match to protein family HMM PF01408%3B match to protein family HMM PF02894;gbkey=CDS;product=oxidoreductase domain protein;protein_id=AEF86861.1;transl_table=11 CP001843.1 Genbank gene 792713 793384 . - . ID=gene744;Name=TREPR_3373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3373 CP001843.1 Genbank CDS 792713 793384 . - 0 ID=cds700;Parent=gene744;Dbxref=NCBI_GP:AEF84554.1;Name=AEF84554.1;Note=identified by match to protein family HMM TIGR01352;gbkey=CDS;product=TonB protein;protein_id=AEF84554.1;transl_table=11 CP001843.1 Genbank gene 793377 793775 . - . ID=gene745;Name=TREPR_3372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3372 CP001843.1 Genbank CDS 793377 793775 . - 0 ID=cds701;Parent=gene745;Dbxref=NCBI_GP:AEF85277.1;Name=AEF85277.1;Note=identified by match to protein family HMM PF02472;gbkey=CDS;product=putative biopolymer transport ExbD protein;protein_id=AEF85277.1;transl_table=11 CP001843.1 Genbank gene 793772 794185 . - . ID=gene746;Name=TREPR_3371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3371 CP001843.1 Genbank CDS 793772 794185 . - 0 ID=cds702;Parent=gene746;Dbxref=NCBI_GP:AEF86796.1;Name=AEF86796.1;gbkey=CDS;product=TolR protein;protein_id=AEF86796.1;transl_table=11 CP001843.1 Genbank gene 794182 794826 . - . ID=gene747;Name=TREPR_3370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3370 CP001843.1 Genbank CDS 794182 794826 . - 0 ID=cds703;Parent=gene747;Dbxref=NCBI_GP:AEF83769.1;Name=AEF83769.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;product=biopolymer transport protein;protein_id=AEF83769.1;transl_table=11 CP001843.1 Genbank gene 794835 795686 . - . ID=gene748;Name=TREPR_3369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3369 CP001843.1 Genbank CDS 794835 795686 . - 0 ID=cds704;Parent=gene748;Dbxref=NCBI_GP:AEF85230.1;Name=AEF85230.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85230.1;transl_table=11 CP001843.1 Genbank gene 795689 795931 . - . ID=gene749;Name=TREPR_3368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3368 CP001843.1 Genbank CDS 795689 795931 . - 0 ID=cds705;Parent=gene749;Dbxref=NCBI_GP:AEF85743.1;Name=AEF85743.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85743.1;transl_table=11 CP001843.1 Genbank gene 796031 796813 . - . ID=gene750;Name=TREPR_3367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3367 CP001843.1 Genbank CDS 796031 796813 . - 0 ID=cds706;Parent=gene750;Dbxref=NCBI_GP:AEF85542.1;Name=AEF85542.1;Note=identified by match to protein family HMM PF04002%3B match to protein family HMM TIGR00608;gbkey=CDS;product=DNA repair protein RadC;protein_id=AEF85542.1;transl_table=11 CP001843.1 Genbank gene 796942 798102 . + . ID=gene751;Name=TREPR_3365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3365 CP001843.1 Genbank CDS 796942 798102 . + 0 ID=cds707;Parent=gene751;Dbxref=NCBI_GP:AEF85152.1;Name=AEF85152.1;Note=identified by match to protein family HMM PF00248;gbkey=CDS;product=oxidoreductase%2C aldo/keto reductase family;protein_id=AEF85152.1;transl_table=11 CP001843.1 Genbank gene 798202 798447 . + . ID=gene752;Name=TREPR_3364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3364 CP001843.1 Genbank CDS 798202 798447 . + 0 ID=cds708;Parent=gene752;Dbxref=NCBI_GP:AEF85459.1;Name=AEF85459.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85459.1;transl_table=11 CP001843.1 Genbank gene 798569 799219 . + . ID=gene753;Name=TREPR_3363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3363 CP001843.1 Genbank CDS 798569 799219 . + 0 ID=cds709;Parent=gene753;Dbxref=NCBI_GP:AEF86614.1;Name=AEF86614.1;Note=identified by match to protein family HMM PF06123;gbkey=CDS;product=inner membrane protein CreD;protein_id=AEF86614.1;transl_table=11 CP001843.1 Genbank gene 799227 800264 . - . ID=gene754;Name=TREPR_3362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3362 CP001843.1 Genbank CDS 799227 800264 . - 0 ID=cds710;Parent=gene754;Dbxref=NCBI_GP:AEF84380.1;Name=AEF84380.1;Note=identified by match to protein family HMM PF01207;gbkey=CDS;product=putative dihydrouridine synthase;protein_id=AEF84380.1;transl_table=11 CP001843.1 Genbank gene 800436 800873 . + . ID=gene755;Name=TREPR_3361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3361 CP001843.1 Genbank CDS 800436 800873 . + 0 ID=cds711;Parent=gene755;Dbxref=NCBI_GP:AEF86334.1;Name=AEF86334.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=chemotaxis protein Chey;protein_id=AEF86334.1;transl_table=11 CP001843.1 Genbank gene 801042 802259 . + . ID=gene756;Name=TREPR_3360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3360 CP001843.1 Genbank CDS 801042 802259 . + 0 ID=cds712;Parent=gene756;Dbxref=NCBI_GP:AEF83875.1;Name=AEF83875.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=metallo-beta-lactamase family protein;protein_id=AEF83875.1;transl_table=11 CP001843.1 Genbank gene 802980 804116 . + . ID=gene757;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=TREPR_3359 CP001843.1 Genbank CDS 802980 804116 . + 0 ID=cds713;Parent=gene757;Dbxref=NCBI_GP:AEF85251.1;Name=AEF85251.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR00221;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=AEF85251.1;transl_table=11 CP001843.1 Genbank gene 804131 804922 . + . ID=gene758;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=TREPR_3358 CP001843.1 Genbank CDS 804131 804922 . + 0 ID=cds714;Parent=gene758;Dbxref=NCBI_GP:AEF85352.1;Name=AEF85352.1;Note=identified by match to protein family HMM PF01182%3B match to protein family HMM TIGR00502;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=AEF85352.1;transl_table=11 CP001843.1 Genbank gene 805025 806431 . - . ID=gene759;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=TREPR_3357 CP001843.1 Genbank CDS 805025 806431 . - 0 ID=cds715;Parent=gene759;Dbxref=NCBI_GP:AEF84259.1;Name=AEF84259.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838;gbkey=CDS;gene=argH;product=argininosuccinate lyase;protein_id=AEF84259.1;transl_table=11 CP001843.1 Genbank gene 806521 806907 . - . ID=gene760;Name=TREPR_3356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3356 CP001843.1 Genbank CDS 806521 806907 . - 0 ID=cds716;Parent=gene760;Dbxref=NCBI_GP:AEF85477.1;Name=AEF85477.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=PIN domain protein;protein_id=AEF85477.1;transl_table=11 CP001843.1 Genbank gene 806886 807143 . - . ID=gene761;Name=TREPR_3355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3355 CP001843.1 Genbank CDS 806886 807143 . - 0 ID=cds717;Parent=gene761;Dbxref=NCBI_GP:AEF86754.1;Name=AEF86754.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86754.1;transl_table=11 CP001843.1 Genbank gene 807268 807606 . - . ID=gene762;Name=TREPR_3354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3354 CP001843.1 Genbank CDS 807268 807606 . - 0 ID=cds718;Parent=gene762;Dbxref=NCBI_GP:AEF85782.1;Name=AEF85782.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=DNA-binding protein;protein_id=AEF85782.1;transl_table=11 CP001843.1 Genbank gene 807766 808074 . + . ID=gene763;Name=TREPR_3353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3353 CP001843.1 Genbank CDS 807766 808074 . + 0 ID=cds719;Parent=gene763;Dbxref=NCBI_GP:AEF84936.1;Name=AEF84936.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84936.1;transl_table=11 CP001843.1 Genbank gene 808071 809087 . + . ID=gene764;Name=TREPR_3352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3352 CP001843.1 Genbank CDS 808071 809087 . + 0 ID=cds720;Parent=gene764;Dbxref=NCBI_GP:AEF83936.1;Name=AEF83936.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83936.1;transl_table=11 CP001843.1 Genbank gene 809245 809451 . + . ID=gene765;Name=TREPR_3351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3351 CP001843.1 Genbank CDS 809245 809451 . + 0 ID=cds721;Parent=gene765;Dbxref=NCBI_GP:AEF85687.1;Name=AEF85687.1;Note=identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439;gbkey=CDS;product=conserved domain protein;protein_id=AEF85687.1;transl_table=11 CP001843.1 Genbank gene 809647 810948 . - . ID=gene766;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=TREPR_3350 CP001843.1 Genbank CDS 809647 810948 . - 0 ID=cds722;Parent=gene766;Dbxref=NCBI_GP:AEF84411.1;Name=AEF84411.1;Note=identified by match to protein family HMM PF00764%3B match to protein family HMM TIGR00032;gbkey=CDS;gene=argG;product=argininosuccinate synthase;protein_id=AEF84411.1;transl_table=11 CP001843.1 Genbank gene 811039 812247 . + . ID=gene767;Name=TREPR_3349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3349 CP001843.1 Genbank CDS 811039 812247 . + 0 ID=cds723;Parent=gene767;Dbxref=NCBI_GP:AEF83654.1;Name=AEF83654.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;product=peptidase%2C M20/M25/M40 family;protein_id=AEF83654.1;transl_table=11 CP001843.1 Genbank gene 812234 813520 . + . ID=gene768;Name=TREPR_3348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3348 CP001843.1 Genbank CDS 812234 813520 . + 0 ID=cds724;Parent=gene768;Dbxref=NCBI_GP:AEF84218.1;Name=AEF84218.1;Note=identified by match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM PF07730;gbkey=CDS;product=two-component system sensor kinase;protein_id=AEF84218.1;transl_table=11 CP001843.1 Genbank gene 813513 814133 . + . ID=gene769;Name=TREPR_3347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3347 CP001843.1 Genbank CDS 813513 814133 . + 0 ID=cds725;Parent=gene769;Dbxref=NCBI_GP:AEF85997.1;Name=AEF85997.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=ExpA;protein_id=AEF85997.1;transl_table=11 CP001843.1 Genbank gene 814269 814967 . + . ID=gene770;Name=TREPR_3346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3346 CP001843.1 Genbank CDS 814269 814967 . + 0 ID=cds726;Parent=gene770;Dbxref=NCBI_GP:AEF84998.1;Name=AEF84998.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=ABC-type amino acid transport system%2C permease component;protein_id=AEF84998.1;transl_table=11 CP001843.1 Genbank gene 815016 815834 . + . ID=gene771;Name=TREPR_3345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3345 CP001843.1 Genbank CDS 815016 815834 . + 0 ID=cds727;Parent=gene771;Dbxref=NCBI_GP:AEF86635.1;Name=AEF86635.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86635.1;transl_table=11 CP001843.1 Genbank gene 815869 816606 . + . ID=gene772;Name=TREPR_3344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3344 CP001843.1 Genbank CDS 815869 816606 . + 0 ID=cds728;Parent=gene772;Dbxref=NCBI_GP:AEF85873.1;Name=AEF85873.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC-type amino acid transport system%2C permease component;protein_id=AEF85873.1;transl_table=11 CP001843.1 Genbank gene 816603 817361 . + . ID=gene773;Name=TREPR_3343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3343 CP001843.1 Genbank CDS 816603 817361 . + 0 ID=cds729;Parent=gene773;Dbxref=NCBI_GP:AEF85700.1;Name=AEF85700.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=L-cystine import ATP-binding protein TcyN;protein_id=AEF85700.1;transl_table=11 CP001843.1 Genbank gene 817374 818738 . + . ID=gene774;Name=TREPR_3342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3342 CP001843.1 Genbank CDS 817374 818738 . + 0 ID=cds730;Parent=gene774;Dbxref=NCBI_GP:AEF84476.1;Name=AEF84476.1;Note=identified by match to protein family HMM PF05147;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84476.1;transl_table=11 CP001843.1 Genbank gene 818869 819186 . + . ID=gene775;Name=TREPR_3341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3341 CP001843.1 Genbank CDS 818869 819186 . + 0 ID=cds731;Parent=gene775;Dbxref=NCBI_GP:AEF85096.1;Name=AEF85096.1;Note=identified by match to protein family HMM PF03992;gbkey=CDS;product=antibiotic biosynthesis monooxygenase;protein_id=AEF85096.1;transl_table=11 CP001843.1 Genbank gene 819345 820043 . + . ID=gene776;Name=TREPR_3340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3340 CP001843.1 Genbank CDS 819345 820043 . + 0 ID=cds732;Parent=gene776;Dbxref=NCBI_GP:AEF84301.1;Name=AEF84301.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=ABC-type amino acid transport system%2C permease component;protein_id=AEF84301.1;transl_table=11 CP001843.1 Genbank gene 820078 820887 . + . ID=gene777;Name=TREPR_3339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3339 CP001843.1 Genbank CDS 820078 820887 . + 0 ID=cds733;Parent=gene777;Dbxref=NCBI_GP:AEF86485.1;Name=AEF86485.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=bacterial extracellular solute-binding protein%2C family 3;protein_id=AEF86485.1;transl_table=11 CP001843.1 Genbank gene 820916 821626 . + . ID=gene778;Name=TREPR_3338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3338 CP001843.1 Genbank CDS 820916 821626 . + 0 ID=cds734;Parent=gene778;Dbxref=NCBI_GP:AEF85037.1;Name=AEF85037.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC-type amino acid transport system%2C permease component;protein_id=AEF85037.1;transl_table=11 CP001843.1 Genbank gene 821623 822381 . + . ID=gene779;Name=TREPR_3337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3337 CP001843.1 Genbank CDS 821623 822381 . + 0 ID=cds735;Parent=gene779;Dbxref=NCBI_GP:AEF85497.1;Name=AEF85497.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=L-cystine import ATP-binding protein TcyN;protein_id=AEF85497.1;transl_table=11 CP001843.1 Genbank gene 822392 823783 . + . ID=gene780;Name=TREPR_3336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3336 CP001843.1 Genbank CDS 822392 823783 . + 0 ID=cds736;Parent=gene780;Dbxref=NCBI_GP:AEF84471.1;Name=AEF84471.1;Note=identified by match to protein family HMM PF05147;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84471.1;transl_table=11 CP001843.1 Genbank gene 823802 824359 . - . ID=gene781;Name=TREPR_3335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3335 CP001843.1 Genbank CDS 823802 824359 . - 0 ID=cds737;Parent=gene781;Dbxref=NCBI_GP:AEF84712.1;Name=AEF84712.1;Note=identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358;gbkey=CDS;product=multimeric flavodoxin WrbA family protein;protein_id=AEF84712.1;transl_table=11 CP001843.1 Genbank gene 824372 825736 . - . ID=gene782;Name=TREPR_3334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3334 CP001843.1 Genbank CDS 824372 825736 . - 0 ID=cds738;Parent=gene782;Dbxref=NCBI_GP:AEF83976.1;Name=AEF83976.1;Note=identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00707;gbkey=CDS;product=acetylornithine transaminase;protein_id=AEF83976.1;transl_table=11 CP001843.1 Genbank gene 825729 826619 . - . ID=gene783;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=TREPR_3333 CP001843.1 Genbank CDS 825729 826619 . - 0 ID=cds739;Parent=gene783;Dbxref=NCBI_GP:AEF86971.1;Name=AEF86971.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00761;gbkey=CDS;gene=argB;product=acetylglutamate kinase;protein_id=AEF86971.1;transl_table=11 CP001843.1 Genbank gene 826638 827780 . - . ID=gene784;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=TREPR_3332 CP001843.1 Genbank CDS 826638 827780 . - 0 ID=cds740;Parent=gene784;Dbxref=NCBI_GP:AEF86130.1;Name=AEF86130.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01850;gbkey=CDS;gene=argC;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=AEF86130.1;transl_table=11 CP001843.1 Genbank gene 828050 828421 . + . ID=gene785;Name=TREPR_3331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3331 CP001843.1 Genbank CDS 828050 828421 . + 0 ID=cds741;Parent=gene785;Dbxref=NCBI_GP:AEF84227.1;Name=AEF84227.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84227.1;transl_table=11 CP001843.1 Genbank gene 828470 829954 . - . ID=gene786;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=TREPR_3330 CP001843.1 Genbank CDS 828470 829954 . - 0 ID=cds742;Parent=gene786;Dbxref=NCBI_GP:AEF83637.1;Name=AEF83637.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=AEF83637.1;transl_table=11 CP001843.1 Genbank gene 829974 831083 . - . ID=gene787;Name=TREPR_3329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3329 CP001843.1 Genbank CDS 829974 831083 . - 0 ID=cds743;Parent=gene787;Dbxref=NCBI_GP:AEF86172.1;Name=AEF86172.1;Note=identified by match to protein family HMM PF02615;gbkey=CDS;product=malate dehydrogenase;protein_id=AEF86172.1;transl_table=11 CP001843.1 Genbank gene 831158 832477 . - . ID=gene788;Name=TREPR_3328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3328 CP001843.1 Genbank CDS 831158 832477 . - 0 ID=cds744;Parent=gene788;Dbxref=NCBI_GP:AEF85646.1;Name=AEF85646.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=glycerol-3-phosphate ABC transporter substarate-binding protein;protein_id=AEF85646.1;transl_table=11 CP001843.1 Genbank gene 832555 833379 . - . ID=gene789;Name=TREPR_3327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3327 CP001843.1 Genbank CDS 832555 833379 . - 0 ID=cds745;Parent=gene789;Dbxref=NCBI_GP:AEF84406.1;Name=AEF84406.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=sugar permease;protein_id=AEF84406.1;transl_table=11 CP001843.1 Genbank gene 833376 834251 . - . ID=gene790;Name=TREPR_3326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3326 CP001843.1 Genbank CDS 833376 834251 . - 0 ID=cds746;Parent=gene790;Dbxref=NCBI_GP:AEF83681.1;Name=AEF83681.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=glycerol-3-phosphate ABC transporter;protein_id=AEF83681.1;transl_table=11 CP001843.1 Genbank gene 834320 835138 . - . ID=gene791;Name=TREPR_3325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3325 CP001843.1 Genbank CDS 834320 835138 . - 0 ID=cds747;Parent=gene791;Dbxref=NCBI_GP:AEF85657.1;Name=AEF85657.1;Note=identified by match to protein family HMM PF03009;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=AEF85657.1;transl_table=11 CP001843.1 Genbank gene 835275 835835 . + . ID=gene792;Name=TREPR_3323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3323 CP001843.1 Genbank CDS 835275 835835 . + 0 ID=cds748;Parent=gene792;Dbxref=NCBI_GP:AEF85045.1;Name=AEF85045.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85045.1;transl_table=11 CP001843.1 Genbank gene 836035 836316 . + . ID=gene793;Name=TREPR_3322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3322 CP001843.1 Genbank CDS 836035 836316 . + 0 ID=cds749;Parent=gene793;Dbxref=NCBI_GP:AEF86395.1;Name=AEF86395.1;Note=identified by match to protein family HMM PF05015;gbkey=CDS;product=plasmid maintenance system killer protein;protein_id=AEF86395.1;transl_table=11 CP001843.1 Genbank gene 836374 836676 . + . ID=gene794;Name=higA_1;gbkey=Gene;gene=higA_1;gene_biotype=protein_coding;locus_tag=TREPR_3321 CP001843.1 Genbank CDS 836374 836676 . + 0 ID=cds750;Parent=gene794;Dbxref=NCBI_GP:AEF84183.1;Name=AEF84183.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM TIGR02607;gbkey=CDS;gene=higA_1;product=addiction module antidote protein%2C HigA family;protein_id=AEF84183.1;transl_table=11 CP001843.1 Genbank gene 837199 838164 . + . ID=gene795;Name=TREPR_3320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3320 CP001843.1 Genbank CDS 837199 838164 . + 0 ID=cds751;Parent=gene795;Dbxref=NCBI_GP:AEF86917.1;Name=AEF86917.1;Note=identified by match to protein family HMM TIGR01784;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86917.1;transl_table=11 CP001843.1 Genbank gene 838478 839986 . - . ID=gene796;Name=TREPR_3319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3319 CP001843.1 Genbank CDS 838478 839986 . - 0 ID=cds752;Parent=gene796;Dbxref=NCBI_GP:AEF84803.1;Name=AEF84803.1;Note=identified by match to protein family HMM PF09587;gbkey=CDS;product=bacterial capsule synthesis protein;protein_id=AEF84803.1;transl_table=11 CP001843.1 Genbank gene 840011 841285 . - . ID=gene797;Name=TREPR_3318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3318 CP001843.1 Genbank CDS 840011 841285 . - 0 ID=cds753;Parent=gene797;Dbxref=NCBI_GP:AEF84931.1;Name=AEF84931.1;Note=identified by match to protein family HMM PF00939%3B match to protein family HMM PF03600;gbkey=CDS;product=citrate transporter family protein;protein_id=AEF84931.1;transl_table=11 CP001843.1 Genbank gene 841426 843720 . - . ID=gene798;Name=TREPR_3317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3317 CP001843.1 Genbank CDS 841426 843720 . - 0 ID=cds754;Parent=gene798;Dbxref=NCBI_GP:AEF84129.1;Name=AEF84129.1;Note=identified by match to protein family HMM PF00330%3B match to protein family HMM PF00694;gbkey=CDS;product=aconitase family protein;protein_id=AEF84129.1;transl_table=11 CP001843.1 Genbank gene 843723 845261 . - . ID=gene799;Name=citF_1;gbkey=Gene;gene=citF_1;gene_biotype=protein_coding;locus_tag=TREPR_3316 CP001843.1 Genbank CDS 843723 845261 . - 0 ID=cds755;Parent=gene799;Dbxref=NCBI_GP:AEF84684.1;Name=AEF84684.1;Note=identified by match to protein family HMM PF04223%3B match to protein family HMM TIGR01584;gbkey=CDS;gene=citF_1;product=citrate lyase%2C alpha subunit;protein_id=AEF84684.1;transl_table=11 CP001843.1 Genbank gene 845258 846166 . - . ID=gene800;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=TREPR_3315 CP001843.1 Genbank CDS 845258 846166 . - 0 ID=cds756;Parent=gene800;Dbxref=NCBI_GP:AEF83776.1;Name=AEF83776.1;Note=identified by match to protein family HMM PF03328%3B match to protein family HMM TIGR01588;gbkey=CDS;gene=citE;product=citrate (pro-3S)-lyase%2C beta subunit;protein_id=AEF83776.1;transl_table=11 CP001843.1 Genbank gene 846145 846441 . - . ID=gene801;Name=citD_1;gbkey=Gene;gene=citD_1;gene_biotype=protein_coding;locus_tag=TREPR_3314 CP001843.1 Genbank CDS 846145 846441 . - 0 ID=cds757;Parent=gene801;Dbxref=NCBI_GP:AEF86323.1;Name=AEF86323.1;Note=identified by match to protein family HMM PF04953%3B match to protein family HMM TIGR01608;gbkey=CDS;gene=citD_1;product=citrate lyase acyl carrier protein;protein_id=AEF86323.1;transl_table=11 CP001843.1 Genbank gene 846465 847625 . - . ID=gene802;Name=TREPR_3313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3313 CP001843.1 Genbank CDS 846465 847625 . - 0 ID=cds758;Parent=gene802;Dbxref=NCBI_GP:AEF85475.1;Name=AEF85475.1;Note=identified by match to protein family HMM PF04303;gbkey=CDS;product=3-methylitaconate isomerase;protein_id=AEF85475.1;transl_table=11 CP001843.1 Genbank gene 847700 848608 . + . ID=gene803;Name=TREPR_3312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3312 CP001843.1 Genbank CDS 847700 848608 . + 0 ID=cds759;Parent=gene803;Dbxref=NCBI_GP:AEF85486.1;Name=AEF85486.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=transcriptional regulator%2C LysR family;protein_id=AEF85486.1;transl_table=11 CP001843.1 Genbank gene 849023 849433 . + . ID=gene804;Name=TREPR_3310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3310 CP001843.1 Genbank CDS 849023 849433 . + 0 ID=cds760;Parent=gene804;Dbxref=NCBI_GP:AEF83960.1;Name=AEF83960.1;gbkey=CDS;product=Zn-finger domain protein;protein_id=AEF83960.1;transl_table=11 CP001843.1 Genbank gene 849443 850282 . + . ID=gene805;Name=TREPR_3309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3309 CP001843.1 Genbank CDS 849443 850282 . + 0 ID=cds761;Parent=gene805;Dbxref=NCBI_GP:AEF86738.1;Name=AEF86738.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86738.1;transl_table=11 CP001843.1 Genbank gene 850287 850991 . + . ID=gene806;Name=TREPR_3308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3308 CP001843.1 Genbank CDS 850287 850991 . + 0 ID=cds762;Parent=gene806;Dbxref=NCBI_GP:AEF84143.1;Name=AEF84143.1;Note=identified by match to protein family HMM PF00226;gbkey=CDS;product=molecular chaperone%2C DnaJ family;protein_id=AEF84143.1;transl_table=11 CP001843.1 Genbank gene 851014 852744 . + . ID=gene807;Name=TREPR_3307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3307 CP001843.1 Genbank CDS 851014 852744 . + 0 ID=cds763;Parent=gene807;Dbxref=NCBI_GP:AEF85238.1;Name=AEF85238.1;Note=identified by match to protein family HMM PF00012;gbkey=CDS;product=chaperone protein DnaK;protein_id=AEF85238.1;transl_table=11 CP001843.1 Genbank gene 852781 853245 . + . ID=gene808;Name=TREPR_3306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3306 CP001843.1 Genbank CDS 852781 853245 . + 0 ID=cds764;Parent=gene808;Dbxref=NCBI_GP:AEF83683.1;Name=AEF83683.1;Note=identified by match to protein family HMM PF06803;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83683.1;transl_table=11 CP001843.1 Genbank gene 853259 853930 . + . ID=gene809;Name=TREPR_3305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3305 CP001843.1 Genbank CDS 853259 853930 . + 0 ID=cds765;Parent=gene809;Dbxref=NCBI_GP:AEF84654.1;Name=AEF84654.1;Note=identified by match to protein family HMM PF04607;gbkey=CDS;product=RelA/SpoT domain protein;protein_id=AEF84654.1;transl_table=11 CP001843.1 Genbank gene 853933 854688 . + . ID=gene810;Name=TREPR_3304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3304 CP001843.1 Genbank CDS 853933 854688 . + 0 ID=cds766;Parent=gene810;Dbxref=NCBI_GP:AEF85829.1;Name=AEF85829.1;Note=identified by match to protein family HMM PF06541;gbkey=CDS;product=permease;protein_id=AEF85829.1;transl_table=11 CP001843.1 Genbank gene 854751 855281 . + . ID=gene811;Name=TREPR_3303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3303 CP001843.1 Genbank CDS 854751 855281 . + 0 ID=cds767;Parent=gene811;Dbxref=NCBI_GP:AEF86820.1;Name=AEF86820.1;Note=identified by match to protein family HMM PF00255;gbkey=CDS;product=peroxiredoxin Hyr1;protein_id=AEF86820.1;transl_table=11 CP001843.1 Genbank gene 855510 856001 . + . ID=gene812;Name=TREPR_3302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3302 CP001843.1 Genbank CDS 855510 856001 . + 0 ID=cds768;Parent=gene812;Dbxref=NCBI_GP:AEF84184.1;Name=AEF84184.1;Note=identified by match to protein family HMM PF01257;gbkey=CDS;product=Fe-hydrogenase gamma subunit;protein_id=AEF84184.1;transl_table=11 CP001843.1 Genbank gene 856014 857918 . + . ID=gene813;Name=TREPR_3301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3301 CP001843.1 Genbank CDS 856014 857918 . + 0 ID=cds769;Parent=gene813;Dbxref=NCBI_GP:AEF84826.1;Name=AEF84826.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01512;gbkey=CDS;product=NAD-dependent formate dehydrogenase beta subunit;protein_id=AEF84826.1;transl_table=11 CP001843.1 Genbank gene 857921 859663 . + . ID=gene814;Name=TREPR_3300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3300 CP001843.1 Genbank CDS 857921 859663 . + 0 ID=cds770;Parent=gene814;Dbxref=NCBI_GP:AEF85721.1;Name=AEF85721.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF02906;gbkey=CDS;product=hydrogen dehydrogenase;protein_id=AEF85721.1;transl_table=11 CP001843.1 Genbank gene 859847 860881 . - . ID=gene815;Name=TREPR_3299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3299 CP001843.1 Genbank CDS 859847 860881 . - 0 ID=cds771;Parent=gene815;Dbxref=NCBI_GP:AEF86477.1;Name=AEF86477.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86477.1;transl_table=11 CP001843.1 Genbank gene 861130 861879 . - . ID=gene816;Name=TREPR_3298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3298 CP001843.1 Genbank CDS 861130 861879 . - 0 ID=cds772;Parent=gene816;Dbxref=NCBI_GP:AEF86456.1;Name=AEF86456.1;Note=identified by match to protein family HMM PF01163%3B match to protein family HMM PF01636;gbkey=CDS;product=aminoglycoside phosphotransferase;protein_id=AEF86456.1;transl_table=11 CP001843.1 Genbank gene 861876 864512 . - . ID=gene817;Name=TREPR_3297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3297 CP001843.1 Genbank CDS 861876 864512 . - 0 ID=cds773;Parent=gene817;Dbxref=NCBI_GP:AEF83635.1;Name=AEF83635.1;Note=identified by match to protein family HMM PF00171%3B match to protein family HMM PF00465;gbkey=CDS;product=aldehyde-alcohol dehydrogenase 2;protein_id=AEF83635.1;transl_table=11 CP001843.1 Genbank gene 864664 865044 . - . ID=gene818;Name=TREPR_3296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3296 CP001843.1 Genbank CDS 864664 865044 . - 0 ID=cds774;Parent=gene818;Dbxref=NCBI_GP:AEF86104.1;Name=AEF86104.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86104.1;transl_table=11 CP001843.1 Genbank gene 865132 865710 . + . ID=gene819;Name=TREPR_3295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3295 CP001843.1 Genbank CDS 865132 865710 . + 0 ID=cds775;Parent=gene819;Dbxref=NCBI_GP:AEF86998.1;Name=AEF86998.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=glutathione import ATP-binding protein GsiA;protein_id=AEF86998.1;transl_table=11 CP001843.1 Genbank gene 865751 866524 . - . ID=gene820;Name=TREPR_3294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3294 CP001843.1 Genbank CDS 865751 866524 . - 0 ID=cds776;Parent=gene820;Dbxref=NCBI_GP:AEF86585.1;Name=AEF86585.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=cobalt import ATP-binding protein CbiO 2;protein_id=AEF86585.1;transl_table=11 CP001843.1 Genbank gene 866512 867330 . - . ID=gene821;Name=cbiQ;gbkey=Gene;gene=cbiQ;gene_biotype=protein_coding;locus_tag=TREPR_3293 CP001843.1 Genbank CDS 866512 867330 . - 0 ID=cds777;Parent=gene821;Dbxref=NCBI_GP:AEF85565.1;Name=AEF85565.1;Note=identified by match to protein family HMM PF02361%3B match to protein family HMM TIGR02454;gbkey=CDS;gene=cbiQ;product=cobalt ABC transporter%2C permease protein CbiQ;protein_id=AEF85565.1;transl_table=11 CP001843.1 Genbank gene 867358 868365 . - . ID=gene822;Name=TREPR_3292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3292 CP001843.1 Genbank CDS 867358 868365 . - 0 ID=cds778;Parent=gene822;Dbxref=NCBI_GP:AEF85032.1;Name=AEF85032.1;Note=identified by match to protein family HMM PF01891;gbkey=CDS;product=cobalamin;protein_id=AEF85032.1;transl_table=11 CP001843.1 Genbank gene 868594 868797 . - . ID=gene823;Name=TREPR_3291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3291 CP001843.1 Genbank CDS 868594 868797 . - 0 ID=cds779;Parent=gene823;Dbxref=NCBI_GP:AEF84038.1;Name=AEF84038.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84038.1;transl_table=11 CP001843.1 Genbank gene 868868 869035 . - . ID=gene824;Name=TREPR_3290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3290 CP001843.1 Genbank CDS 868868 869035 . - 0 ID=cds780;Parent=gene824;Dbxref=NCBI_GP:AEF83539.1;Name=AEF83539.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83539.1;transl_table=11 CP001843.1 Genbank gene 869227 869886 . + . ID=gene825;Name=TREPR_3289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3289 CP001843.1 Genbank CDS 869227 869886 . + 0 ID=cds781;Parent=gene825;Dbxref=NCBI_GP:AEF86050.1;Name=AEF86050.1;Note=identified by match to protein family HMM PF01336;gbkey=CDS;product=DNA polymerase III subunit alpha;protein_id=AEF86050.1;transl_table=11 CP001843.1 Genbank gene 870374 872107 . - . ID=gene826;Name=TREPR_3288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3288 CP001843.1 Genbank CDS 870374 872107 . - 0 ID=cds782;Parent=gene826;Dbxref=NCBI_GP:AEF86023.1;Name=AEF86023.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF02256%3B match to protein family HMM PF02906%3B match to protein family HMM TIGR02512;gbkey=CDS;product=hydrogenase-1;protein_id=AEF86023.1;transl_table=11 CP001843.1 Genbank gene 872126 874009 . - . ID=gene827;Name=TREPR_3287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3287 CP001843.1 Genbank CDS 872126 874009 . - 0 ID=cds783;Parent=gene827;Dbxref=NCBI_GP:AEF85018.1;Name=AEF85018.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01512;gbkey=CDS;product=NADH dehydrogenase;protein_id=AEF85018.1;transl_table=11 CP001843.1 Genbank gene 874002 874493 . - . ID=gene828;Name=TREPR_3286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3286 CP001843.1 Genbank CDS 874002 874493 . - 0 ID=cds784;Parent=gene828;Dbxref=NCBI_GP:AEF84133.1;Name=AEF84133.1;Note=identified by match to protein family HMM PF01257;gbkey=CDS;product=Fe-hydrogenase gamma subunit;protein_id=AEF84133.1;transl_table=11 CP001843.1 Genbank gene 874786 875715 . + . ID=gene829;Name=TREPR_3284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3284 CP001843.1 Genbank CDS 874786 875715 . + 0 ID=cds785;Parent=gene829;Dbxref=NCBI_GP:AEF85798.1;Name=AEF85798.1;Note=identified by match to protein family HMM PF00126;gbkey=CDS;product=putative transcriptional regulator;protein_id=AEF85798.1;transl_table=11 CP001843.1 Genbank gene 875727 877490 . + . ID=gene830;Name=TREPR_3283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3283 CP001843.1 Genbank CDS 875727 877490 . + 0 ID=cds786;Parent=gene830;Dbxref=NCBI_GP:AEF86760.1;Name=AEF86760.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04060;gbkey=CDS;product=ferredoxin 2;protein_id=AEF86760.1;transl_table=11 CP001843.1 Genbank gene 877487 878695 . + . ID=gene831;Name=TREPR_3282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3282 CP001843.1 Genbank CDS 877487 878695 . + 0 ID=cds787;Parent=gene831;Dbxref=NCBI_GP:AEF86828.1;Name=AEF86828.1;Note=identified by match to protein family HMM PF07228;gbkey=CDS;product=stage II sporulation E family protein;protein_id=AEF86828.1;transl_table=11 CP001843.1 Genbank gene 879668 880534 . + . ID=gene832;Name=TREPR_3281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3281 CP001843.1 Genbank CDS 879668 880534 . + 0 ID=cds788;Parent=gene832;Dbxref=NCBI_GP:AEF84053.1;Name=AEF84053.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84053.1;transl_table=11 CP001843.1 Genbank gene 880524 881393 . + . ID=gene833;Name=TREPR_3280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3280 CP001843.1 Genbank CDS 880524 881393 . + 0 ID=cds789;Parent=gene833;Dbxref=NCBI_GP:AEF84578.1;Name=AEF84578.1;Note=identified by match to protein family HMM PF08241;gbkey=CDS;product=methyltransferase type 11;protein_id=AEF84578.1;transl_table=11 CP001843.1 Genbank gene 881732 882385 . + . ID=gene834;Name=TREPR_3278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3278 CP001843.1 Genbank CDS 881732 882385 . + 0 ID=cds790;Parent=gene834;Dbxref=NCBI_GP:AEF85022.1;Name=AEF85022.1;Note=identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;product=ubiquinone/menaquinone biosynthesis methyltransferase UbiE;protein_id=AEF85022.1;transl_table=11 CP001843.1 Genbank gene 882407 883468 . + . ID=gene835;Name=TREPR_3277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3277 CP001843.1 Genbank CDS 882407 883468 . + 0 ID=cds791;Parent=gene835;Dbxref=NCBI_GP:AEF84039.1;Name=AEF84039.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=periplasmic binding protein;protein_id=AEF84039.1;transl_table=11 CP001843.1 Genbank gene 883461 884558 . + . ID=gene836;Name=TREPR_3276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3276 CP001843.1 Genbank CDS 883461 884558 . + 0 ID=cds792;Parent=gene836;Dbxref=NCBI_GP:AEF85130.1;Name=AEF85130.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;product=transport system permease protein;protein_id=AEF85130.1;transl_table=11 CP001843.1 Genbank gene 884552 885319 . + . ID=gene837;Name=TREPR_3275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3275 CP001843.1 Genbank CDS 884552 885319 . + 0 ID=cds793;Parent=gene837;Dbxref=NCBI_GP:AEF84381.1;Name=AEF84381.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=iron(III) dicitrate transport ATP-binding protein FecE;protein_id=AEF84381.1;transl_table=11 CP001843.1 Genbank gene 885421 885945 . + . ID=gene838;Name=TREPR_3274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3274 CP001843.1 Genbank CDS 885421 885945 . + 0 ID=cds794;Parent=gene838;Dbxref=NCBI_GP:AEF86186.1;Name=AEF86186.1;Note=identified by match to protein family HMM PF02663;gbkey=CDS;product=FwdE family protein;protein_id=AEF86186.1;transl_table=11 CP001843.1 Genbank gene 885955 887037 . + . ID=gene839;Name=TREPR_3273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3273 CP001843.1 Genbank CDS 885955 887037 . + 0 ID=cds795;Parent=gene839;Dbxref=NCBI_GP:AEF85411.1;Name=AEF85411.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=Fe3+-siderophore ABC transporter%2C periplasmic Fe3+-siderophore-binding protein;protein_id=AEF85411.1;transl_table=11 CP001843.1 Genbank gene 887030 888097 . + . ID=gene840;Name=TREPR_3272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3272 CP001843.1 Genbank CDS 887030 888097 . + 0 ID=cds796;Parent=gene840;Dbxref=NCBI_GP:AEF85907.1;Name=AEF85907.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;product=transport system permease protein;protein_id=AEF85907.1;transl_table=11 CP001843.1 Genbank gene 888094 888861 . + . ID=gene841;Name=TREPR_3271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3271 CP001843.1 Genbank CDS 888094 888861 . + 0 ID=cds797;Parent=gene841;Dbxref=NCBI_GP:AEF83873.1;Name=AEF83873.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ferrichrome transport ATP-binding protein FhuC;protein_id=AEF83873.1;transl_table=11 CP001843.1 Genbank gene 888911 890509 . + . ID=gene842;Name=TREPR_3270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3270 CP001843.1 Genbank CDS 888911 890509 . + 0 ID=cds798;Parent=gene842;Dbxref=NCBI_GP:AEF84386.1;Name=AEF84386.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=peptide/opine/nickel ABC transporter;protein_id=AEF84386.1;transl_table=11 CP001843.1 Genbank gene 890514 891500 . + . ID=gene843;Name=TREPR_3269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3269 CP001843.1 Genbank CDS 890514 891500 . + 0 ID=cds799;Parent=gene843;Dbxref=NCBI_GP:AEF86943.1;Name=AEF86943.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF86943.1;transl_table=11 CP001843.1 Genbank gene 891497 892330 . + . ID=gene844;Name=TREPR_3268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3268 CP001843.1 Genbank CDS 891497 892330 . + 0 ID=cds800;Parent=gene844;Dbxref=NCBI_GP:AEF86305.1;Name=AEF86305.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF86305.1;transl_table=11 CP001843.1 Genbank gene 892335 893267 . + . ID=gene845;Name=TREPR_3267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3267 CP001843.1 Genbank CDS 892335 893267 . + 0 ID=cds801;Parent=gene845;Dbxref=NCBI_GP:AEF85945.1;Name=AEF85945.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide/dipeptide ABC transporter%2C ATP-binding protein;protein_id=AEF85945.1;transl_table=11 CP001843.1 Genbank gene 893251 893922 . + . ID=gene846;Name=TREPR_3266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3266 CP001843.1 Genbank CDS 893251 893922 . + 0 ID=cds802;Parent=gene846;Dbxref=NCBI_GP:AEF86673.1;Name=AEF86673.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=nickel import ATP-binding protein NikE;protein_id=AEF86673.1;transl_table=11 CP001843.1 Genbank gene 894043 895332 . - . ID=gene847;Name=TREPR_3265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3265 CP001843.1 Genbank CDS 894043 895332 . - 0 ID=cds803;Parent=gene847;Dbxref=NCBI_GP:AEF85930.1;Name=AEF85930.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;product=aspartate aminotransferase;protein_id=AEF85930.1;transl_table=11 CP001843.1 Genbank gene 895416 896549 . + . ID=gene848;Name=moxR;gbkey=Gene;gene=moxR;gene_biotype=protein_coding;locus_tag=TREPR_3264 CP001843.1 Genbank CDS 895416 896549 . + 0 ID=cds804;Parent=gene848;Dbxref=NCBI_GP:AEF85137.1;Name=AEF85137.1;Note=identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728;gbkey=CDS;gene=moxR;product=ATPase%2C MoxR family;protein_id=AEF85137.1;transl_table=11 CP001843.1 Genbank gene 896559 897467 . + . ID=gene849;Name=TREPR_3263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3263 CP001843.1 Genbank CDS 896559 897467 . + 0 ID=cds805;Parent=gene849;Dbxref=NCBI_GP:AEF84305.1;Name=AEF84305.1;Note=identified by match to protein family HMM PF01882;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84305.1;transl_table=11 CP001843.1 Genbank gene 897464 898480 . + . ID=gene850;Name=TREPR_3262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3262 CP001843.1 Genbank CDS 897464 898480 . + 0 ID=cds806;Parent=gene850;Dbxref=NCBI_GP:AEF85341.1;Name=AEF85341.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85341.1;transl_table=11 CP001843.1 Genbank gene 898477 899478 . + . ID=gene851;Name=TREPR_3261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3261 CP001843.1 Genbank CDS 898477 899478 . + 0 ID=cds807;Parent=gene851;Dbxref=NCBI_GP:AEF84678.1;Name=AEF84678.1;Note=identified by match to protein family HMM PF00092;gbkey=CDS;product=von Willebrand factor%2C type A;protein_id=AEF84678.1;transl_table=11 CP001843.1 Genbank gene 899475 900554 . + . ID=gene852;Name=TREPR_3260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3260 CP001843.1 Genbank CDS 899475 900554 . + 0 ID=cds808;Parent=gene852;Dbxref=NCBI_GP:AEF83895.1;Name=AEF83895.1;Note=identified by match to protein family HMM PF00092;gbkey=CDS;product=VWA domain protein;protein_id=AEF83895.1;transl_table=11 CP001843.1 Genbank gene 900547 901191 . + . ID=gene853;Name=TREPR_3258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3258 CP001843.1 Genbank CDS 900547 901191 . + 0 ID=cds809;Parent=gene853;Dbxref=NCBI_GP:AEF84239.1;Name=AEF84239.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84239.1;transl_table=11 CP001843.1 Genbank gene 901380 902813 . + . ID=gene854;Name=TREPR_3257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3257 CP001843.1 Genbank CDS 901380 902813 . + 0 ID=cds810;Parent=gene854;Dbxref=NCBI_GP:AEF84823.1;Name=AEF84823.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84823.1;transl_table=11 CP001843.1 Genbank gene 902827 903447 . + . ID=gene855;Name=TREPR_3256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3256 CP001843.1 Genbank CDS 902827 903447 . + 0 ID=cds811;Parent=gene855;Dbxref=NCBI_GP:AEF83698.1;Name=AEF83698.1;Note=identified by match to protein family HMM PF01713;gbkey=CDS;product=Smr domain protein;protein_id=AEF83698.1;transl_table=11 CP001843.1 Genbank gene 903456 903680 . - . ID=gene856;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=TREPR_3255 CP001843.1 Genbank CDS 903456 903680 . - 0 ID=cds812;Parent=gene856;Dbxref=NCBI_GP:AEF86245.1;Name=AEF86245.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008;gbkey=CDS;gene=infA;product=translation initiation factor IF-1;protein_id=AEF86245.1;transl_table=11 CP001843.1 Genbank gene 903908 905278 . + . ID=gene857;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=TREPR_3254 CP001843.1 Genbank CDS 903908 905278 . + 0 ID=cds813;Parent=gene857;Dbxref=NCBI_GP:AEF85324.1;Name=AEF85324.1;Note=identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01356;gbkey=CDS;gene=aroA;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=AEF85324.1;transl_table=11 CP001843.1 Genbank pseudogene 905348 905629 . + . ID=gene858;Name=TREPR_3253;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3253;pseudo=true CP001843.1 Genbank pseudogene 905619 905765 . + . ID=gene859;Name=TREPR_3252;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3252;pseudo=true CP001843.1 Genbank pseudogene 906182 909742 . + . ID=gene860;Name=TREPR_3251;Note=repeat protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF09479%3B match to protein family HMM TIGR02543;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3251;pseudo=true CP001843.1 Genbank gene 910298 910453 . + . ID=gene861;Name=TREPR_3250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3250 CP001843.1 Genbank CDS 910298 910453 . + 0 ID=cds814;Parent=gene861;Dbxref=NCBI_GP:AEF84872.1;Name=AEF84872.1;gbkey=CDS;product=ChpI protein;protein_id=AEF84872.1;transl_table=11 CP001843.1 Genbank gene 910440 910787 . + . ID=gene862;Name=TREPR_3249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3249 CP001843.1 Genbank CDS 910440 910787 . + 0 ID=cds815;Parent=gene862;Dbxref=NCBI_GP:AEF85674.1;Name=AEF85674.1;Note=identified by match to protein family HMM PF02452;gbkey=CDS;product=ChpK;protein_id=AEF85674.1;transl_table=11 CP001843.1 Genbank gene 910853 911206 . + . ID=gene863;Name=TREPR_3248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3248 CP001843.1 Genbank CDS 910853 911206 . + 0 ID=cds816;Parent=gene863;Dbxref=NCBI_GP:AEF85563.1;Name=AEF85563.1;gbkey=CDS;product=transposase IS4 family protein;protein_id=AEF85563.1;transl_table=11 CP001843.1 Genbank gene 911452 911805 . + . ID=gene864;Name=TREPR_3247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3247 CP001843.1 Genbank CDS 911452 911805 . + 0 ID=cds817;Parent=gene864;Dbxref=NCBI_GP:AEF86423.1;Name=AEF86423.1;Note=identified by match to protein family HMM PF01909;gbkey=CDS;product=nucleotidyltransferase family protein;protein_id=AEF86423.1;transl_table=11 CP001843.1 Genbank gene 911792 912013 . + . ID=gene865;Name=TREPR_3246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3246 CP001843.1 Genbank CDS 911792 912013 . + 0 ID=cds818;Parent=gene865;Dbxref=NCBI_GP:AEF85220.1;Name=AEF85220.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85220.1;transl_table=11 CP001843.1 Genbank gene 912537 913157 . + . ID=gene866;Name=TREPR_3243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3243 CP001843.1 Genbank CDS 912537 913157 . + 0 ID=cds819;Parent=gene866;Dbxref=NCBI_GP:AEF85802.1;Name=AEF85802.1;Note=identified by match to protein family HMM PF00301;gbkey=CDS;product=putative rubredoxin;protein_id=AEF85802.1;transl_table=11 CP001843.1 Genbank gene 913147 913278 . - . ID=gene867;Name=TREPR_3244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3244 CP001843.1 Genbank CDS 913147 913278 . - 0 ID=cds820;Parent=gene867;Dbxref=NCBI_GP:AEF86748.1;Name=AEF86748.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86748.1;transl_table=11 CP001843.1 Genbank gene 913250 914695 . + . ID=gene868;Name=TREPR_3242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3242 CP001843.1 Genbank CDS 913250 914695 . + 0 ID=cds821;Parent=gene868;Dbxref=NCBI_GP:AEF84620.1;Name=AEF84620.1;Note=identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254;gbkey=CDS;product=Trk system potassium uptake protein TrkA;protein_id=AEF84620.1;transl_table=11 CP001843.1 Genbank gene 914692 916137 . + . ID=gene869;Name=TREPR_3241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3241 CP001843.1 Genbank CDS 914692 916137 . + 0 ID=cds822;Parent=gene869;Dbxref=NCBI_GP:AEF84890.1;Name=AEF84890.1;Note=identified by match to protein family HMM PF02386;gbkey=CDS;product=Trk system potassium uptake protein TrkH;protein_id=AEF84890.1;transl_table=11 CP001843.1 Genbank gene 916175 916852 . - . ID=gene870;Name=TREPR_3240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3240 CP001843.1 Genbank CDS 916175 916852 . - 0 ID=cds823;Parent=gene870;Dbxref=NCBI_GP:AEF83991.1;Name=AEF83991.1;Note=identified by match to protein family HMM PF04172;gbkey=CDS;product=LrgB family protein;protein_id=AEF83991.1;transl_table=11 CP001843.1 Genbank gene 916855 917211 . - . ID=gene871;Name=TREPR_3239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3239 CP001843.1 Genbank CDS 916855 917211 . - 0 ID=cds824;Parent=gene871;Dbxref=NCBI_GP:AEF85668.1;Name=AEF85668.1;Note=identified by match to protein family HMM PF03788;gbkey=CDS;product=murein hydrolase exporter;protein_id=AEF85668.1;transl_table=11 CP001843.1 Genbank gene 917425 919803 . + . ID=gene872;Name=TREPR_3238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3238 CP001843.1 Genbank CDS 917425 919803 . + 0 ID=cds825;Parent=gene872;Dbxref=NCBI_GP:AEF83717.1;Name=AEF83717.1;gbkey=CDS;product=fnip;protein_id=AEF83717.1;transl_table=11 CP001843.1 Genbank gene 919814 920455 . + . ID=gene873;Name=TREPR_3237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3237 CP001843.1 Genbank CDS 919814 920455 . + 0 ID=cds826;Parent=gene873;Dbxref=NCBI_GP:AEF86285.1;Name=AEF86285.1;Note=identified by match to protein family HMM PF06555;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86285.1;transl_table=11 CP001843.1 Genbank gene 920627 921082 . - . ID=gene874;Name=TREPR_3236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3236 CP001843.1 Genbank CDS 920627 921082 . - 0 ID=cds827;Parent=gene874;Dbxref=NCBI_GP:AEF84671.1;Name=AEF84671.1;Note=identified by match to protein family HMM PF00011;gbkey=CDS;product=stress response protein;protein_id=AEF84671.1;transl_table=11 CP001843.1 Genbank gene 921482 921763 . + . ID=gene875;Name=TREPR_3234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3234 CP001843.1 Genbank CDS 921482 921763 . + 0 ID=cds828;Parent=gene875;Dbxref=NCBI_GP:AEF86675.1;Name=AEF86675.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=AEF86675.1;transl_table=11 CP001843.1 Genbank gene 921756 922019 . + . ID=gene876;Name=TREPR_3233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3233 CP001843.1 Genbank CDS 921756 922019 . + 0 ID=cds829;Parent=gene876;Dbxref=NCBI_GP:AEF84384.1;Name=AEF84384.1;Note=identified by match to protein family HMM PF06769%3B match to protein family HMM TIGR02116;gbkey=CDS;product=addiction module toxin%2C Txe/YoeB family;protein_id=AEF84384.1;transl_table=11 CP001843.1 Genbank gene 922031 922465 . - . ID=gene877;Name=TREPR_3232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3232 CP001843.1 Genbank CDS 922031 922465 . - 0 ID=cds830;Parent=gene877;Dbxref=NCBI_GP:AEF86114.1;Name=AEF86114.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86114.1;transl_table=11 CP001843.1 Genbank gene 922468 922587 . + . ID=gene878;Name=TREPR_3231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3231 CP001843.1 Genbank CDS 922468 922587 . + 0 ID=cds831;Parent=gene878;Dbxref=NCBI_GP:AEF86857.1;Name=AEF86857.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86857.1;transl_table=11 CP001843.1 Genbank gene 922612 923670 . + . ID=gene879;Name=TREPR_3230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3230 CP001843.1 Genbank CDS 922612 923670 . + 0 ID=cds832;Parent=gene879;Dbxref=NCBI_GP:AEF86328.1;Name=AEF86328.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86328.1;transl_table=11 CP001843.1 Genbank gene 923827 926316 . + . ID=gene880;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=TREPR_3229 CP001843.1 Genbank CDS 923827 926316 . + 0 ID=cds833;Parent=gene880;Dbxref=NCBI_GP:AEF83578.1;Name=AEF83578.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=AEF83578.1;transl_table=11 CP001843.1 Genbank gene 926340 927530 . + . ID=gene881;Name=TREPR_3228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3228 CP001843.1 Genbank CDS 926340 927530 . + 0 ID=cds834;Parent=gene881;Dbxref=NCBI_GP:AEF85310.1;Name=AEF85310.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=MFS transporter;protein_id=AEF85310.1;transl_table=11 CP001843.1 Genbank gene 927783 928649 . - . ID=gene882;Name=TREPR_3227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3227 CP001843.1 Genbank CDS 927783 928649 . - 0 ID=cds835;Parent=gene882;Dbxref=NCBI_GP:AEF84851.1;Name=AEF84851.1;Note=identified by match to protein family HMM PF02153;gbkey=CDS;product=prephenate dehydrogenase;protein_id=AEF84851.1;transl_table=11 CP001843.1 Genbank gene 928662 929687 . - . ID=gene883;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=TREPR_3226 CP001843.1 Genbank CDS 928662 929687 . - 0 ID=cds836;Parent=gene883;Dbxref=NCBI_GP:AEF86817.1;Name=AEF86817.1;Note=identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01361;gbkey=CDS;gene=aroF;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=AEF86817.1;transl_table=11 CP001843.1 Genbank gene 930386 933067 . + . ID=gene884;Name=TREPR_3223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3223 CP001843.1 Genbank CDS 930386 933067 . + 0 ID=cds837;Parent=gene884;Dbxref=NCBI_GP:AEF86280.1;Name=AEF86280.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86280.1;transl_table=11 CP001843.1 Genbank gene 933153 933275 . + . ID=gene885;Name=TREPR_3222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3222 CP001843.1 Genbank CDS 933153 933275 . + 0 ID=cds838;Parent=gene885;Dbxref=NCBI_GP:AEF86347.1;Name=AEF86347.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86347.1;transl_table=11 CP001843.1 Genbank gene 933420 934490 . - . ID=gene886;Name=TREPR_3221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3221 CP001843.1 Genbank CDS 933420 934490 . - 0 ID=cds839;Parent=gene886;Dbxref=NCBI_GP:AEF84254.1;Name=AEF84254.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=AEF84254.1;transl_table=11 CP001843.1 Genbank gene 934480 936267 . - . ID=gene887;Name=TREPR_3220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3220 CP001843.1 Genbank CDS 934480 936267 . - 0 ID=cds840;Parent=gene887;Dbxref=NCBI_GP:AEF84824.1;Name=AEF84824.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=abc transporter integral membrane protein;protein_id=AEF84824.1;transl_table=11 CP001843.1 Genbank gene 936237 937283 . - . ID=gene888;Name=TREPR_3219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3219 CP001843.1 Genbank CDS 936237 937283 . - 0 ID=cds841;Parent=gene888;Dbxref=NCBI_GP:AEF85869.1;Name=AEF85869.1;Note=identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR01254;gbkey=CDS;product=thiamine-binding periplasmic protein;protein_id=AEF85869.1;transl_table=11 CP001843.1 Genbank gene 937348 937512 . - . ID=gene889;Name=TREPR_3218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3218 CP001843.1 Genbank CDS 937348 937512 . - 0 ID=cds842;Parent=gene889;Dbxref=NCBI_GP:AEF84715.1;Name=AEF84715.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84715.1;transl_table=11 CP001843.1 Genbank binding_site 937420 937555 . - . ID=id23;Note=TPP riboswitch (THI element)%3B Rfam score 45.59;bound_moiety=thiamine/thiamin pyrophosphate;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00059 CP001843.1 Genbank gene 937612 938325 . - . ID=gene890;Name=TREPR_3217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3217 CP001843.1 Genbank CDS 937612 938325 . - 0 ID=cds843;Parent=gene890;Dbxref=NCBI_GP:AEF85337.1;Name=AEF85337.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase ncair mutase subunit;protein_id=AEF85337.1;transl_table=11 CP001843.1 Genbank gene 938306 939712 . - . ID=gene891;Name=TREPR_3216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3216 CP001843.1 Genbank CDS 938306 939712 . - 0 ID=cds844;Parent=gene891;Dbxref=NCBI_GP:AEF86449.1;Name=AEF86449.1;Note=identified by match to protein family HMM PF01969%3B match to protein family HMM TIGR00299;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86449.1;transl_table=11 CP001843.1 Genbank gene 939722 940552 . - . ID=gene892;Name=TREPR_3215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3215 CP001843.1 Genbank CDS 939722 940552 . - 0 ID=cds845;Parent=gene892;Dbxref=NCBI_GP:AEF85090.1;Name=AEF85090.1;Note=identified by match to protein family HMM PF00733%3B match to protein family HMM TIGR00268;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85090.1;transl_table=11 CP001843.1 Genbank gene 941127 942332 . - . ID=gene893;Name=TREPR_3214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3214 CP001843.1 Genbank CDS 941127 942332 . - 0 ID=cds846;Parent=gene893;Dbxref=NCBI_GP:AEF84463.1;Name=AEF84463.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=transporter%2C major facilitator family;protein_id=AEF84463.1;transl_table=11 CP001843.1 Genbank gene 942332 942793 . - . ID=gene894;Name=TREPR_3213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3213 CP001843.1 Genbank CDS 942332 942793 . - 0 ID=cds847;Parent=gene894;Dbxref=NCBI_GP:AEF86148.1;Name=AEF86148.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86148.1;transl_table=11 CP001843.1 Genbank gene 942795 943319 . - . ID=gene895;Name=TREPR_3212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3212 CP001843.1 Genbank CDS 942795 943319 . - 0 ID=cds848;Parent=gene895;Dbxref=NCBI_GP:AEF86877.1;Name=AEF86877.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=NADPH-flavin oxidoreductase;protein_id=AEF86877.1;transl_table=11 CP001843.1 Genbank gene 943408 943560 . - . ID=gene896;Name=TREPR_3211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3211 CP001843.1 Genbank CDS 943408 943560 . - 0 ID=cds849;Parent=gene896;Dbxref=NCBI_GP:AEF84175.1;Name=AEF84175.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84175.1;transl_table=11 CP001843.1 Genbank gene 943582 944436 . + . ID=gene897;Name=TREPR_3210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3210 CP001843.1 Genbank CDS 943582 944436 . + 0 ID=cds850;Parent=gene897;Dbxref=NCBI_GP:AEF85012.1;Name=AEF85012.1;Note=identified by match to protein family HMM PF01634%3B match to protein family HMM PF08029%3B match to protein family HMM TIGR00070%3B match to protein family HMM TIGR03455;gbkey=CDS;product=ATP phosphoribosyltransferase;protein_id=AEF85012.1;transl_table=11 CP001843.1 Genbank gene 944474 945100 . + . ID=gene898;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=TREPR_3209 CP001843.1 Genbank CDS 944474 945100 . + 0 ID=cds851;Parent=gene898;Dbxref=NCBI_GP:AEF85690.1;Name=AEF85690.1;Note=identified by match to protein family HMM PF00475;gbkey=CDS;gene=hisB;product=imidazoleglycerol-phosphate dehydratase;protein_id=AEF85690.1;transl_table=11 CP001843.1 Genbank gene 945114 945743 . + . ID=gene899;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=TREPR_3208 CP001843.1 Genbank CDS 945114 945743 . + 0 ID=cds852;Parent=gene899;Dbxref=NCBI_GP:AEF86426.1;Name=AEF86426.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR01855;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit;protein_id=AEF86426.1;transl_table=11 CP001843.1 Genbank gene 945771 946571 . + . ID=gene900;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=TREPR_3207 CP001843.1 Genbank CDS 945771 946571 . + 0 ID=cds853;Parent=gene900;Dbxref=NCBI_GP:AEF85266.1;Name=AEF85266.1;Note=identified by match to protein family HMM PF00977%3B match to protein family HMM TIGR00735;gbkey=CDS;gene=hisF;product=imidazoleglycerol phosphate synthase%2C cyclase subunit;protein_id=AEF85266.1;transl_table=11 CP001843.1 Genbank gene 946565 947881 . + . ID=gene901;Name=TREPR_3206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3206 CP001843.1 Genbank CDS 946565 947881 . + 0 ID=cds854;Parent=gene901;Dbxref=NCBI_GP:AEF85038.1;Name=AEF85038.1;Note=identified by match to protein family HMM PF00977%3B match to protein family HMM PF01502%3B match to protein family HMM PF01503%3B match to protein family HMM TIGR03188;gbkey=CDS;product=histidine biosynthesis bifunctional protein hisIE;protein_id=AEF85038.1;transl_table=11 CP001843.1 Genbank gene 947878 948939 . + . ID=gene902;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=TREPR_3205 CP001843.1 Genbank CDS 947878 948939 . + 0 ID=cds855;Parent=gene902;Dbxref=NCBI_GP:AEF86043.1;Name=AEF86043.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01141;gbkey=CDS;gene=hisC;product=histidinol-phosphate transaminase;protein_id=AEF86043.1;transl_table=11 CP001843.1 Genbank gene 948981 951149 . + . ID=gene903;Name=TREPR_3204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3204 CP001843.1 Genbank CDS 948981 951149 . + 0 ID=cds856;Parent=gene903;Dbxref=NCBI_GP:AEF83754.1;Name=AEF83754.1;Note=identified by match to protein family HMM PF00815%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00069;gbkey=CDS;product=histidinol dehydrogenase (HDH);protein_id=AEF83754.1;transl_table=11 CP001843.1 Genbank gene 951152 951652 . + . ID=gene904;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=TREPR_3203 CP001843.1 Genbank CDS 951152 951652 . + 0 ID=cds857;Parent=gene904;Dbxref=NCBI_GP:AEF84054.1;Name=AEF84054.1;Note=identified by match to protein family HMM PF04073%3B match to protein family HMM TIGR00011;gbkey=CDS;gene=ybaK;product=YbaK/ebsC protein;protein_id=AEF84054.1;transl_table=11 CP001843.1 Genbank gene 951974 953170 . + . ID=gene905;Name=TREPR_3201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3201 CP001843.1 Genbank CDS 951974 953170 . + 0 ID=cds858;Parent=gene905;Dbxref=NCBI_GP:AEF85445.1;Name=AEF85445.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85445.1;transl_table=11 CP001843.1 Genbank gene 953243 954646 . - . ID=gene906;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=TREPR_3200 CP001843.1 Genbank CDS 953243 954646 . - 0 ID=cds859;Parent=gene906;Dbxref=NCBI_GP:AEF86237.1;Name=AEF86237.1;Note=identified by match to protein family HMM TIGR00416;gbkey=CDS;gene=radA;product=DNA repair protein RadA;protein_id=AEF86237.1;transl_table=11 CP001843.1 Genbank gene 954695 954895 . + . ID=gene907;Name=TREPR_3199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3199 CP001843.1 Genbank CDS 954695 954895 . + 0 ID=cds860;Parent=gene907;Dbxref=NCBI_GP:AEF84369.1;Name=AEF84369.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84369.1;transl_table=11 CP001843.1 Genbank gene 955239 956414 . - . ID=gene908;Name=TREPR_3198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3198 CP001843.1 Genbank CDS 955239 956414 . - 0 ID=cds861;Parent=gene908;Dbxref=NCBI_GP:AEF84296.1;Name=AEF84296.1;Note=identified by match to protein family HMM PF04151;gbkey=CDS;product=bacterial pre-peptidase C- domain family;protein_id=AEF84296.1;transl_table=11 CP001843.1 Genbank gene 956537 957205 . - . ID=gene909;Name=TREPR_3197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3197 CP001843.1 Genbank CDS 956537 957205 . - 0 ID=cds862;Parent=gene909;Dbxref=NCBI_GP:AEF84959.1;Name=AEF84959.1;Note=identified by match to protein family HMM PF04199;gbkey=CDS;product=cyclase family protein;protein_id=AEF84959.1;transl_table=11 CP001843.1 Genbank gene 957207 959114 . - . ID=gene910;Name=TREPR_3196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3196 CP001843.1 Genbank CDS 957207 959114 . - 0 ID=cds863;Parent=gene910;Dbxref=NCBI_GP:AEF86036.1;Name=AEF86036.1;Note=identified by match to protein family HMM PF00183%3B match to protein family HMM PF02518;gbkey=CDS;product=chaperone protein HtpG;protein_id=AEF86036.1;transl_table=11 CP001843.1 Genbank gene 959256 959384 . + . ID=gene911;Name=TREPR_3195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3195 CP001843.1 Genbank CDS 959256 959384 . + 0 ID=cds864;Parent=gene911;Dbxref=NCBI_GP:AEF86851.1;Name=AEF86851.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86851.1;transl_table=11 CP001843.1 Genbank gene 959390 961825 . + . ID=gene912;Name=TREPR_3194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3194 CP001843.1 Genbank CDS 959390 961825 . + 0 ID=cds865;Parent=gene912;Dbxref=NCBI_GP:AEF83862.1;Name=AEF83862.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=multi-sensor hybrid histidine kinase;protein_id=AEF83862.1;transl_table=11 CP001843.1 Genbank gene 961828 962538 . + . ID=gene913;Name=TREPR_3193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3193 CP001843.1 Genbank CDS 961828 962538 . + 0 ID=cds866;Parent=gene913;Dbxref=NCBI_GP:AEF84128.1;Name=AEF84128.1;gbkey=CDS;product=putative ResB family protein;protein_id=AEF84128.1;transl_table=11 CP001843.1 Genbank gene 962543 963328 . + . ID=gene914;Name=TREPR_3192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3192 CP001843.1 Genbank CDS 962543 963328 . + 0 ID=cds867;Parent=gene914;Dbxref=NCBI_GP:AEF85279.1;Name=AEF85279.1;Note=identified by match to protein family HMM PF01578;gbkey=CDS;product=cytochrome C biogenesis protein;protein_id=AEF85279.1;transl_table=11 CP001843.1 Genbank gene 963374 965803 . - . ID=gene915;Name=TREPR_3191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3191 CP001843.1 Genbank CDS 963374 965803 . - 0 ID=cds868;Parent=gene915;Dbxref=NCBI_GP:AEF86523.1;Name=AEF86523.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF86523.1;transl_table=11 CP001843.1 Genbank gene 965800 966006 . - . ID=gene916;Name=TREPR_3190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3190 CP001843.1 Genbank CDS 965800 966006 . - 0 ID=cds869;Parent=gene916;Dbxref=NCBI_GP:AEF86256.1;Name=AEF86256.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86256.1;transl_table=11 CP001843.1 Genbank gene 966138 967877 . + . ID=gene917;Name=ptsP_1;gbkey=Gene;gene=ptsP_1;gene_biotype=protein_coding;locus_tag=TREPR_3189 CP001843.1 Genbank CDS 966138 967877 . + 0 ID=cds870;Parent=gene917;Dbxref=NCBI_GP:AEF83747.1;Name=AEF83747.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417;gbkey=CDS;gene=ptsP_1;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=AEF83747.1;transl_table=11 CP001843.1 Genbank gene 967886 969463 . + . ID=gene918;Name=engA;gbkey=Gene;gene=engA;gene_biotype=protein_coding;locus_tag=TREPR_3188 CP001843.1 Genbank CDS 967886 969463 . + 0 ID=cds871;Parent=gene918;Dbxref=NCBI_GP:AEF84966.1;Name=AEF84966.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00650%3B match to protein family HMM TIGR03594;gbkey=CDS;gene=engA;product=ribosome-associated GTPase EngA;protein_id=AEF84966.1;transl_table=11 CP001843.1 Genbank gene 969465 969806 . + . ID=gene919;Name=TREPR_3187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3187 CP001843.1 Genbank CDS 969465 969806 . + 0 ID=cds872;Parent=gene919;Dbxref=NCBI_GP:AEF85434.1;Name=AEF85434.1;Note=identified by match to protein family HMM PF00376;gbkey=CDS;product=transcriptional regulator%2C MerR family;protein_id=AEF85434.1;transl_table=11 CP001843.1 Genbank gene 969806 971065 . + . ID=gene920;Name=TREPR_3186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3186 CP001843.1 Genbank CDS 969806 971065 . + 0 ID=cds873;Parent=gene920;Dbxref=NCBI_GP:AEF86583.1;Name=AEF86583.1;Note=identified by match to protein family HMM PF09243;gbkey=CDS;product=small ribosomal subunit Rsm22 family;protein_id=AEF86583.1;transl_table=11 CP001843.1 Genbank gene 971269 972114 . - . ID=gene921;Name=TREPR_3185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3185 CP001843.1 Genbank CDS 971269 972114 . - 0 ID=cds874;Parent=gene921;Dbxref=NCBI_GP:AEF84105.1;Name=AEF84105.1;Note=identified by match to protein family HMM PF00950%3B match to protein family HMM PF01032;gbkey=CDS;product=ABC-type transport system%2C permease component;protein_id=AEF84105.1;transl_table=11 CP001843.1 Genbank gene 972111 972980 . - . ID=gene922;Name=TREPR_3184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3184 CP001843.1 Genbank CDS 972111 972980 . - 0 ID=cds875;Parent=gene922;Dbxref=NCBI_GP:AEF85208.1;Name=AEF85208.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=zinc import ATP-binding protein ZnuC;protein_id=AEF85208.1;transl_table=11 CP001843.1 Genbank gene 972977 973954 . - . ID=gene923;Name=TREPR_3183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3183 CP001843.1 Genbank CDS 972977 973954 . - 0 ID=cds876;Parent=gene923;Dbxref=NCBI_GP:AEF85751.1;Name=AEF85751.1;Note=identified by match to protein family HMM PF01297;gbkey=CDS;product=adhesion protein;protein_id=AEF85751.1;transl_table=11 CP001843.1 Genbank gene 973956 975326 . - . ID=gene924;Name=TREPR_3182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3182 CP001843.1 Genbank CDS 973956 975326 . - 0 ID=cds877;Parent=gene924;Dbxref=NCBI_GP:AEF85280.1;Name=AEF85280.1;gbkey=CDS;product=putative acyltransferase domain protein;protein_id=AEF85280.1;transl_table=11 CP001843.1 Genbank pseudogene 975378 976331 . - . ID=gene925;Name=TREPR_3181;Note=haloacid dehalogenase domain protein hydrolase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00702;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3181;pseudo=true CP001843.1 Genbank gene 976328 977761 . - . ID=gene926;Name=TREPR_3180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3180 CP001843.1 Genbank CDS 976328 977761 . - 0 ID=cds878;Parent=gene926;Dbxref=NCBI_GP:AEF83941.1;Name=AEF83941.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83941.1;transl_table=11 CP001843.1 Genbank gene 977925 978812 . + . ID=gene927;Name=TREPR_3179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3179 CP001843.1 Genbank CDS 977925 978812 . + 0 ID=cds879;Parent=gene927;Dbxref=NCBI_GP:AEF84669.1;Name=AEF84669.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84669.1;transl_table=11 CP001843.1 Genbank gene 978989 982519 . + . ID=gene928;Name=TREPR_3178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3178 CP001843.1 Genbank CDS 978989 982519 . + 0 ID=cds880;Parent=gene928;Dbxref=NCBI_GP:AEF85895.1;Name=AEF85895.1;Note=identified by match to protein family HMM PF02867%3B match to protein family HMM PF08471%3B match to protein family HMM TIGR02504;gbkey=CDS;product=vitamin B12-dependent ribonucleotide reductase (Ribonucleoside-diphosphate reductase NrdJ);protein_id=AEF85895.1;transl_table=11 CP001843.1 Genbank gene 982628 983527 . + . ID=gene929;Name=TREPR_3177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3177 CP001843.1 Genbank CDS 982628 983527 . + 0 ID=cds881;Parent=gene929;Dbxref=NCBI_GP:AEF85419.1;Name=AEF85419.1;Note=identified by match to protein family HMM PF01070%3B match to protein family HMM PF01180;gbkey=CDS;product=(S)-2-hydroxy-acid oxidase;protein_id=AEF85419.1;transl_table=11 CP001843.1 Genbank gene 983547 984023 . - . ID=gene930;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=TREPR_3176 CP001843.1 Genbank CDS 983547 984023 . - 0 ID=cds882;Parent=gene930;Dbxref=NCBI_GP:AEF85079.1;Name=AEF85079.1;Note=identified by match to protein family HMM PF02664;gbkey=CDS;gene=luxS;product=S-ribosylhomocysteinase LuxS;protein_id=AEF85079.1;transl_table=11 CP001843.1 Genbank gene 984247 986280 . + . ID=gene931;Name=TREPR_3175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3175 CP001843.1 Genbank CDS 984247 986280 . + 0 ID=cds883;Parent=gene931;Dbxref=NCBI_GP:AEF86730.1;Name=AEF86730.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86730.1;transl_table=11 CP001843.1 Genbank gene 986255 989479 . + . ID=gene932;Name=TREPR_3174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3174 CP001843.1 Genbank CDS 986255 989479 . + 0 ID=cds884;Parent=gene932;Dbxref=NCBI_GP:AEF85920.1;Name=AEF85920.1;gbkey=CDS;product=putative extracellular nuclease;protein_id=AEF85920.1;transl_table=11 CP001843.1 Genbank gene 989493 990779 . + . ID=gene933;Name=TREPR_3173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3173 CP001843.1 Genbank CDS 989493 990779 . + 0 ID=cds885;Parent=gene933;Dbxref=NCBI_GP:AEF85139.1;Name=AEF85139.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85139.1;transl_table=11 CP001843.1 Genbank gene 990978 992747 . + . ID=gene934;Name=TREPR_3172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3172 CP001843.1 Genbank CDS 990978 992747 . + 0 ID=cds886;Parent=gene934;Dbxref=NCBI_GP:AEF84235.1;Name=AEF84235.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84235.1;transl_table=11 CP001843.1 Genbank gene 992760 996047 . + . ID=gene935;Name=TREPR_3171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3171 CP001843.1 Genbank CDS 992760 996047 . + 0 ID=cds887;Parent=gene935;Dbxref=NCBI_GP:AEF86376.1;Name=AEF86376.1;Note=identified by match to protein family HMM PF02415;gbkey=CDS;product=putative extracellular nuclease;protein_id=AEF86376.1;transl_table=11 CP001843.1 Genbank gene 996041 997330 . + . ID=gene936;Name=TREPR_3170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3170 CP001843.1 Genbank CDS 996041 997330 . + 0 ID=cds888;Parent=gene936;Dbxref=NCBI_GP:AEF84908.1;Name=AEF84908.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84908.1;transl_table=11 CP001843.1 Genbank gene 997339 999288 . + . ID=gene937;Name=TREPR_3169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3169 CP001843.1 Genbank CDS 997339 999288 . + 0 ID=cds889;Parent=gene937;Dbxref=NCBI_GP:AEF83973.1;Name=AEF83973.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83973.1;transl_table=11 CP001843.1 Genbank gene 999290 1000927 . + . ID=gene938;Name=TREPR_3168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3168 CP001843.1 Genbank CDS 999290 1000927 . + 0 ID=cds890;Parent=gene938;Dbxref=NCBI_GP:AEF86907.1;Name=AEF86907.1;gbkey=CDS;product=putative tetratricopeptide TPR_2 repeat protein;protein_id=AEF86907.1;transl_table=11 CP001843.1 Genbank gene 1000976 1001629 . - . ID=gene939;Name=TREPR_3167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3167 CP001843.1 Genbank CDS 1000976 1001629 . - 0 ID=cds891;Parent=gene939;Dbxref=NCBI_GP:AEF83732.1;Name=AEF83732.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83732.1;transl_table=11 CP001843.1 Genbank gene 1001629 1002339 . - . ID=gene940;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=TREPR_3166 CP001843.1 Genbank CDS 1001629 1002339 . - 0 ID=cds892;Parent=gene940;Dbxref=NCBI_GP:AEF84132.1;Name=AEF84132.1;Note=identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR01704;gbkey=CDS;gene=mtnN;product=MTA/SAH nucleosidase;protein_id=AEF84132.1;transl_table=11 CP001843.1 Genbank gene 1002451 1003638 . + . ID=gene941;Name=TREPR_3165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3165 CP001843.1 Genbank CDS 1002451 1003638 . + 0 ID=cds893;Parent=gene941;Dbxref=NCBI_GP:AEF84829.1;Name=AEF84829.1;Note=identified by match to protein family HMM PF02518;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84829.1;transl_table=11 CP001843.1 Genbank gene 1003661 1004272 . + . ID=gene942;Name=TREPR_3164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3164 CP001843.1 Genbank CDS 1003661 1004272 . + 0 ID=cds894;Parent=gene942;Dbxref=NCBI_GP:AEF85663.1;Name=AEF85663.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=two component transcriptional regulator%2C LuxR family;protein_id=AEF85663.1;transl_table=11 CP001843.1 Genbank gene 1004309 1005436 . - . ID=gene943;Name=TREPR_3163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3163 CP001843.1 Genbank CDS 1004309 1005436 . - 0 ID=cds895;Parent=gene943;Dbxref=NCBI_GP:AEF86400.1;Name=AEF86400.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=ggdef domain/hd domain protein;protein_id=AEF86400.1;transl_table=11 CP001843.1 Genbank gene 1005436 1005903 . - . ID=gene944;Name=TREPR_3162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3162 CP001843.1 Genbank CDS 1005436 1005903 . - 0 ID=cds896;Parent=gene944;Dbxref=NCBI_GP:AEF85617.1;Name=AEF85617.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85617.1;transl_table=11 CP001843.1 Genbank gene 1006081 1006437 . - . ID=gene945;Name=TREPR_3161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3161 CP001843.1 Genbank CDS 1006081 1006437 . - 0 ID=cds897;Parent=gene945;Dbxref=NCBI_GP:AEF86397.1;Name=AEF86397.1;Note=identified by match to protein family HMM PF02021%3B match to protein family HMM TIGR00252;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86397.1;transl_table=11 CP001843.1 Genbank gene 1006427 1007758 . - . ID=gene946;Name=TREPR_3160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3160 CP001843.1 Genbank CDS 1006427 1007758 . - 0 ID=cds898;Parent=gene946;Dbxref=NCBI_GP:AEF86913.1;Name=AEF86913.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=HD domain protein;protein_id=AEF86913.1;transl_table=11 CP001843.1 Genbank gene 1007755 1008000 . - . ID=gene947;Name=TREPR_3159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3159 CP001843.1 Genbank CDS 1007755 1008000 . - 0 ID=cds899;Parent=gene947;Dbxref=NCBI_GP:AEF84428.1;Name=AEF84428.1;gbkey=CDS;product=FlhB domain protein;protein_id=AEF84428.1;transl_table=11 CP001843.1 Genbank pseudogene 1008005 1009033 . - . ID=gene948;Name=TREPR_3158;Note=dinap1-interacting protein 5%3B this region contains one or more premature stops and/or frameshifts;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3158;pseudo=true CP001843.1 Genbank gene 1009061 1009480 . - . ID=gene949;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=TREPR_3157 CP001843.1 Genbank CDS 1009061 1009480 . - 0 ID=cds900;Parent=gene949;Dbxref=NCBI_GP:AEF86135.1;Name=AEF86135.1;Note=identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024;gbkey=CDS;gene=rplS;product=ribosomal protein L19;protein_id=AEF86135.1;transl_table=11 CP001843.1 Genbank gene 1009458 1010282 . - . ID=gene950;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=TREPR_3156 CP001843.1 Genbank CDS 1009458 1010282 . - 0 ID=cds901;Parent=gene950;Dbxref=NCBI_GP:AEF84907.1;Name=AEF84907.1;Note=identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=AEF84907.1;transl_table=11 CP001843.1 Genbank gene 1010291 1010797 . - . ID=gene951;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=TREPR_3155 CP001843.1 Genbank CDS 1010291 1010797 . - 0 ID=cds902;Parent=gene951;Dbxref=NCBI_GP:AEF84160.1;Name=AEF84160.1;Note=identified by match to protein family HMM PF01782%3B match to protein family HMM PF05239%3B match to protein family HMM TIGR02273;gbkey=CDS;gene=rimM;product=16S rRNA processing protein RimM;protein_id=AEF84160.1;transl_table=11 CP001843.1 Genbank gene 1010854 1011087 . - . ID=gene952;Name=TREPR_3154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3154 CP001843.1 Genbank CDS 1010854 1011087 . - 0 ID=cds903;Parent=gene952;Dbxref=NCBI_GP:AEF86572.1;Name=AEF86572.1;gbkey=CDS;product=conserved domain protein;protein_id=AEF86572.1;transl_table=11 CP001843.1 Genbank gene 1011112 1011360 . - . ID=gene953;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=TREPR_3153 CP001843.1 Genbank CDS 1011112 1011360 . - 0 ID=cds904;Parent=gene953;Dbxref=NCBI_GP:AEF85650.1;Name=AEF85650.1;Note=identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002;gbkey=CDS;gene=rpsP;product=ribosomal protein S16;protein_id=AEF85650.1;transl_table=11 CP001843.1 Genbank gene 1011586 1014447 . + . ID=gene954;Name=TREPR_3152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3152 CP001843.1 Genbank CDS 1011586 1014447 . + 0 ID=cds905;Parent=gene954;Dbxref=NCBI_GP:AEF84468.1;Name=AEF84468.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84468.1;transl_table=11 CP001843.1 Genbank gene 1014467 1017499 . - . ID=gene955;Name=TREPR_3151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3151 CP001843.1 Genbank CDS 1014467 1017499 . - 0 ID=cds906;Parent=gene955;Dbxref=NCBI_GP:AEF83714.1;Name=AEF83714.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=PAS/PAC sensor hybrid histidine kinase;protein_id=AEF83714.1;transl_table=11 CP001843.1 Genbank gene 1017536 1017745 . - . ID=gene956;Name=TREPR_3150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3150 CP001843.1 Genbank CDS 1017536 1017745 . - 0 ID=cds907;Parent=gene956;Dbxref=NCBI_GP:AEF85935.1;Name=AEF85935.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85935.1;transl_table=11 CP001843.1 Genbank gene 1017738 1018166 . - . ID=gene957;Name=TREPR_3149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3149 CP001843.1 Genbank CDS 1017738 1018166 . - 0 ID=cds908;Parent=gene957;Dbxref=NCBI_GP:AEF83882.1;Name=AEF83882.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=PIN domain protein;protein_id=AEF83882.1;transl_table=11 CP001843.1 Genbank gene 1018169 1018426 . - . ID=gene958;Name=TREPR_3148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3148 CP001843.1 Genbank CDS 1018169 1018426 . - 0 ID=cds909;Parent=gene958;Dbxref=NCBI_GP:AEF84076.1;Name=AEF84076.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84076.1;transl_table=11 CP001843.1 Genbank gene 1018648 1019817 . + . ID=gene959;Name=TREPR_3147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3147 CP001843.1 Genbank CDS 1018648 1019817 . + 0 ID=cds910;Parent=gene959;Dbxref=NCBI_GP:AEF85600.1;Name=AEF85600.1;Note=identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784;gbkey=CDS;product=decarboxylase%2C pyridoxal-dependent family;protein_id=AEF85600.1;transl_table=11 CP001843.1 Genbank gene 1020000 1020572 . - . ID=gene960;Name=TREPR_3146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3146 CP001843.1 Genbank CDS 1020000 1020572 . - 0 ID=cds911;Parent=gene960;Dbxref=NCBI_GP:AEF85373.1;Name=AEF85373.1;gbkey=CDS;product=transcriptional regulator%2C TetR family;protein_id=AEF85373.1;transl_table=11 CP001843.1 Genbank gene 1020741 1021403 . + . ID=gene961;Name=TREPR_3145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3145 CP001843.1 Genbank CDS 1020741 1021403 . + 0 ID=cds912;Parent=gene961;Dbxref=NCBI_GP:AEF86192.1;Name=AEF86192.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86192.1;transl_table=11 CP001843.1 Genbank gene 1021425 1021751 . + . ID=gene962;Name=TREPR_3144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3144 CP001843.1 Genbank CDS 1021425 1021751 . + 0 ID=cds913;Parent=gene962;Dbxref=NCBI_GP:AEF85225.1;Name=AEF85225.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85225.1;transl_table=11 CP001843.1 Genbank gene 1021805 1023097 . - . ID=gene963;Name=TREPR_3143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3143 CP001843.1 Genbank CDS 1021805 1023097 . - 0 ID=cds914;Parent=gene963;Dbxref=NCBI_GP:AEF86031.1;Name=AEF86031.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86031.1;transl_table=11 CP001843.1 Genbank gene 1023194 1023988 . - . ID=gene964;Name=TREPR_3142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3142 CP001843.1 Genbank CDS 1023194 1023988 . - 0 ID=cds915;Parent=gene964;Dbxref=NCBI_GP:AEF84100.1;Name=AEF84100.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84100.1;transl_table=11 CP001843.1 Genbank gene 1024030 1025469 . + . ID=gene965;Name=TREPR_3141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3141 CP001843.1 Genbank CDS 1024030 1025469 . + 0 ID=cds916;Parent=gene965;Dbxref=NCBI_GP:AEF84807.1;Name=AEF84807.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84807.1;transl_table=11 CP001843.1 Genbank gene 1025668 1025805 . + . ID=gene966;Name=TREPR_3140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3140 CP001843.1 Genbank CDS 1025668 1025805 . + 0 ID=cds917;Parent=gene966;Dbxref=NCBI_GP:AEF85448.1;Name=AEF85448.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85448.1;transl_table=11 CP001843.1 Genbank gene 1025892 1027451 . + . ID=gene967;Name=TREPR_3139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3139 CP001843.1 Genbank CDS 1025892 1027451 . + 0 ID=cds918;Parent=gene967;Dbxref=NCBI_GP:AEF86236.1;Name=AEF86236.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=bacterial extracellular solute-binding protein%2C family 5;protein_id=AEF86236.1;transl_table=11 CP001843.1 Genbank gene 1027529 1028272 . - . ID=gene968;Name=TREPR_3138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3138 CP001843.1 Genbank CDS 1027529 1028272 . - 0 ID=cds919;Parent=gene968;Dbxref=NCBI_GP:AEF84229.1;Name=AEF84229.1;Note=identified by match to protein family HMM PF05036;gbkey=CDS;product=sporulation repeat domain protein;protein_id=AEF84229.1;transl_table=11 CP001843.1 Genbank gene 1028278 1028919 . - . ID=gene969;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=TREPR_3137 CP001843.1 Genbank CDS 1028278 1028919 . - 0 ID=cds920;Parent=gene969;Dbxref=NCBI_GP:AEF84394.1;Name=AEF84394.1;Note=identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=AEF84394.1;transl_table=11 CP001843.1 Genbank gene 1028895 1030271 . + . ID=gene970;Name=TREPR_3136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3136 CP001843.1 Genbank CDS 1028895 1030271 . + 0 ID=cds921;Parent=gene970;Dbxref=NCBI_GP:AEF86681.1;Name=AEF86681.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=efflux transporter protein;protein_id=AEF86681.1;transl_table=11 CP001843.1 Genbank gene 1030347 1031228 . + . ID=gene971;Name=TREPR_3135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3135 CP001843.1 Genbank CDS 1030347 1031228 . + 0 ID=cds922;Parent=gene971;Dbxref=NCBI_GP:AEF85931.1;Name=AEF85931.1;Note=identified by match to protein family HMM PF00797;gbkey=CDS;product=N-acetyltransferase superfamily;protein_id=AEF85931.1;transl_table=11 CP001843.1 Genbank gene 1031239 1032267 . - . ID=gene972;Name=fliM_1;gbkey=Gene;gene=fliM_1;gene_biotype=protein_coding;locus_tag=TREPR_3134 CP001843.1 Genbank CDS 1031239 1032267 . - 0 ID=cds923;Parent=gene972;Dbxref=NCBI_GP:AEF84171.1;Name=AEF84171.1;Note=identified by match to protein family HMM PF01052%3B match to protein family HMM PF02154%3B match to protein family HMM TIGR01397;gbkey=CDS;gene=fliM_1;product=flagellar motor switch protein FliM;protein_id=AEF84171.1;transl_table=11 CP001843.1 Genbank gene 1032458 1033861 . - . ID=gene973;Name=TREPR_3133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3133 CP001843.1 Genbank CDS 1032458 1033861 . - 0 ID=cds924;Parent=gene973;Dbxref=NCBI_GP:AEF86447.1;Name=AEF86447.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01499;gbkey=CDS;product=tetrahydrofolate synthase;protein_id=AEF86447.1;transl_table=11 CP001843.1 Genbank gene 1034497 1035270 . + . ID=gene974;Name=TREPR_3132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3132 CP001843.1 Genbank CDS 1034497 1035270 . + 0 ID=cds925;Parent=gene974;Dbxref=NCBI_GP:AEF85349.1;Name=AEF85349.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;product=cobyrinic Acid a%2Cc-diamide synthase;protein_id=AEF85349.1;transl_table=11 CP001843.1 Genbank gene 1035431 1035985 . + . ID=gene975;Name=TREPR_3131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3131 CP001843.1 Genbank CDS 1035431 1035985 . + 0 ID=cds926;Parent=gene975;Dbxref=NCBI_GP:AEF84533.1;Name=AEF84533.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84533.1;transl_table=11 CP001843.1 Genbank gene 1035988 1036815 . + . ID=gene976;Name=TREPR_3130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3130 CP001843.1 Genbank CDS 1035988 1036815 . + 0 ID=cds927;Parent=gene976;Dbxref=NCBI_GP:AEF84967.1;Name=AEF84967.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=cobalt import ATP-binding protein CbiO 2;protein_id=AEF84967.1;transl_table=11 CP001843.1 Genbank gene 1036812 1037375 . + . ID=gene977;Name=TREPR_3129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3129 CP001843.1 Genbank CDS 1036812 1037375 . + 0 ID=cds928;Parent=gene977;Dbxref=NCBI_GP:AEF83974.1;Name=AEF83974.1;Note=identified by match to protein family HMM PF02361;gbkey=CDS;product=putative cobalt transport permease%2C CbiQ family;protein_id=AEF83974.1;transl_table=11 CP001843.1 Genbank gene 1037378 1037512 . - . ID=gene978;Name=TREPR_3128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3128 CP001843.1 Genbank CDS 1037378 1037512 . - 0 ID=cds929;Parent=gene978;Dbxref=NCBI_GP:AEF86926.1;Name=AEF86926.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86926.1;transl_table=11 CP001843.1 Genbank gene 1037563 1038507 . + . ID=gene979;Name=TREPR_3127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3127 CP001843.1 Genbank CDS 1037563 1038507 . + 0 ID=cds930;Parent=gene979;Dbxref=NCBI_GP:AEF84489.1;Name=AEF84489.1;Note=identified by match to protein family HMM PF02219;gbkey=CDS;product=methylenetetrahydrofolate reductase (NAD(P)H);protein_id=AEF84489.1;transl_table=11 CP001843.1 Genbank gene 1038588 1040321 . + . ID=gene980;Name=fhs;gbkey=Gene;gene=fhs;gene_biotype=protein_coding;locus_tag=TREPR_3126 CP001843.1 Genbank CDS 1038588 1040321 . + 0 ID=cds931;Parent=gene980;Dbxref=NCBI_GP:AEF86247.1;Name=AEF86247.1;Note=identified by match to protein family HMM PF01268;gbkey=CDS;gene=fhs;product=formate--tetrahydrofolate ligase;protein_id=AEF86247.1;transl_table=11 CP001843.1 Genbank gene 1040390 1041019 . + . ID=gene981;Name=TREPR_3125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3125 CP001843.1 Genbank CDS 1040390 1041019 . + 0 ID=cds932;Parent=gene981;Dbxref=NCBI_GP:AEF85472.1;Name=AEF85472.1;Note=identified by match to protein family HMM PF04961;gbkey=CDS;product=methenyl-THF cyclohydrolase;protein_id=AEF85472.1;transl_table=11 CP001843.1 Genbank gene 1041088 1041939 . + . ID=gene982;Name=TREPR_3124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3124 CP001843.1 Genbank CDS 1041088 1041939 . + 0 ID=cds933;Parent=gene982;Dbxref=NCBI_GP:AEF85078.1;Name=AEF85078.1;Note=identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882;gbkey=CDS;product=bifunctional protein FolD;protein_id=AEF85078.1;transl_table=11 CP001843.1 Genbank gene 1041979 1043199 . - . ID=gene983;Name=TREPR_3123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3123 CP001843.1 Genbank CDS 1041979 1043199 . - 0 ID=cds934;Parent=gene983;Dbxref=NCBI_GP:AEF84321.1;Name=AEF84321.1;Note=identified by match to protein family HMM PF07228;gbkey=CDS;product=stage II sporulation E family protein;protein_id=AEF84321.1;transl_table=11 CP001843.1 Genbank gene 1043196 1044947 . - . ID=gene984;Name=TREPR_3122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3122 CP001843.1 Genbank CDS 1043196 1044947 . - 0 ID=cds935;Parent=gene984;Dbxref=NCBI_GP:AEF84685.1;Name=AEF84685.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04060;gbkey=CDS;product=ferredoxin 2;protein_id=AEF84685.1;transl_table=11 CP001843.1 Genbank pseudogene 1046234 1046398 . - . ID=gene985;Name=TREPR_3120;Note=conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3120;pseudo=true CP001843.1 Genbank gene 1046437 1046784 . - . ID=gene986;Name=TREPR_3119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3119 CP001843.1 Genbank CDS 1046437 1046784 . - 0 ID=cds936;Parent=gene986;Dbxref=NCBI_GP:AEF85416.1;Name=AEF85416.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85416.1;transl_table=11 CP001843.1 Genbank gene 1046844 1047842 . - . ID=gene987;Name=TREPR_3118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3118 CP001843.1 Genbank CDS 1046844 1047842 . - 0 ID=cds937;Parent=gene987;Dbxref=NCBI_GP:AEF83676.1;Name=AEF83676.1;Note=identified by match to protein family HMM PF06250;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83676.1;transl_table=11 CP001843.1 Genbank gene 1048068 1050731 . - . ID=gene988;Name=TREPR_3116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3116 CP001843.1 Genbank CDS 1048068 1050731 . - 0 ID=cds938;Parent=gene988;Dbxref=NCBI_GP:AEF85676.1;Name=AEF85676.1;Note=identified by match to protein family HMM PF02463;gbkey=CDS;product=RecF/RecN/SMC N-terminal domain protein;protein_id=AEF85676.1;transl_table=11 CP001843.1 Genbank gene 1050775 1055754 . - . ID=gene989;Name=TREPR_3115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3115 CP001843.1 Genbank CDS 1050775 1055754 . - 0 ID=cds939;Parent=gene989;Dbxref=NCBI_GP:AEF86435.1;Name=AEF86435.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM PF04851;gbkey=CDS;product=endonuclease and methylase LlaGI;protein_id=AEF86435.1;transl_table=11 CP001843.1 Genbank gene 1055751 1056779 . - . ID=gene990;Name=TREPR_3114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3114 CP001843.1 Genbank CDS 1055751 1056779 . - 0 ID=cds940;Parent=gene990;Dbxref=NCBI_GP:AEF86978.1;Name=AEF86978.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86978.1;transl_table=11 CP001843.1 Genbank gene 1056792 1057016 . - . ID=gene991;Name=TREPR_3113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3113 CP001843.1 Genbank CDS 1056792 1057016 . - 0 ID=cds941;Parent=gene991;Dbxref=NCBI_GP:AEF84019.1;Name=AEF84019.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84019.1;transl_table=11 CP001843.1 Genbank gene 1057047 1057670 . - . ID=gene992;Name=TREPR_3112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3112 CP001843.1 Genbank CDS 1057047 1057670 . - 0 ID=cds942;Parent=gene992;Dbxref=NCBI_GP:AEF84514.1;Name=AEF84514.1;Note=identified by match to protein family HMM PF00717;gbkey=CDS;product=peptidase%2C S24 family;protein_id=AEF84514.1;transl_table=11 CP001843.1 Genbank gene 1057807 1058655 . - . ID=gene993;Name=TREPR_3111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3111 CP001843.1 Genbank CDS 1057807 1058655 . - 0 ID=cds943;Parent=gene993;Dbxref=NCBI_GP:AEF86015.1;Name=AEF86015.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86015.1;transl_table=11 CP001843.1 Genbank gene 1058664 1059272 . - . ID=gene994;Name=TREPR_3110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3110 CP001843.1 Genbank CDS 1058664 1059272 . - 0 ID=cds944;Parent=gene994;Dbxref=NCBI_GP:AEF84426.1;Name=AEF84426.1;Note=identified by match to protein family HMM PF08719%3B match to protein family HMM TIGR02464;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84426.1;transl_table=11 CP001843.1 Genbank gene 1059415 1060005 . - . ID=gene995;Name=TREPR_3109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3109 CP001843.1 Genbank CDS 1059415 1060005 . - 0 ID=cds945;Parent=gene995;Dbxref=NCBI_GP:AEF86086.1;Name=AEF86086.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86086.1;transl_table=11 CP001843.1 Genbank gene 1060040 1060219 . - . ID=gene996;Name=TREPR_3108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3108 CP001843.1 Genbank CDS 1060040 1060219 . - 0 ID=cds946;Parent=gene996;Dbxref=NCBI_GP:AEF86595.1;Name=AEF86595.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86595.1;transl_table=11 CP001843.1 Genbank gene 1060200 1060973 . - . ID=gene997;Name=TREPR_3107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3107 CP001843.1 Genbank CDS 1060200 1060973 . - 0 ID=cds947;Parent=gene997;Dbxref=NCBI_GP:AEF84127.1;Name=AEF84127.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84127.1;transl_table=11 CP001843.1 Genbank gene 1061036 1061209 . - . ID=gene998;Name=TREPR_3106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3106 CP001843.1 Genbank CDS 1061036 1061209 . - 0 ID=cds948;Parent=gene998;Dbxref=NCBI_GP:AEF86482.1;Name=AEF86482.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86482.1;transl_table=11 CP001843.1 Genbank gene 1061274 1061597 . - . ID=gene999;Name=TREPR_3105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3105 CP001843.1 Genbank CDS 1061274 1061597 . - 0 ID=cds949;Parent=gene999;Dbxref=NCBI_GP:AEF85635.1;Name=AEF85635.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85635.1;transl_table=11 CP001843.1 Genbank gene 1061625 1062425 . - . ID=gene1000;Name=TREPR_3104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3104 CP001843.1 Genbank CDS 1061625 1062425 . - 0 ID=cds950;Parent=gene1000;Dbxref=NCBI_GP:AEF85961.1;Name=AEF85961.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85961.1;transl_table=11 CP001843.1 Genbank gene 1062643 1062906 . - . ID=gene1001;Name=TREPR_3103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3103 CP001843.1 Genbank CDS 1062643 1062906 . - 0 ID=cds951;Parent=gene1001;Dbxref=NCBI_GP:AEF84974.1;Name=AEF84974.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84974.1;transl_table=11 CP001843.1 Genbank gene 1062984 1064204 . - . ID=gene1002;Name=TREPR_3102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3102 CP001843.1 Genbank CDS 1062984 1064204 . - 0 ID=cds952;Parent=gene1002;Dbxref=NCBI_GP:AEF86269.1;Name=AEF86269.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=AEF86269.1;transl_table=11 CP001843.1 Genbank gene 1064278 1064919 . - . ID=gene1003;Name=TREPR_3101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3101 CP001843.1 Genbank CDS 1064278 1064919 . - 0 ID=cds953;Parent=gene1003;Dbxref=NCBI_GP:AEF86942.1;Name=AEF86942.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86942.1;transl_table=11 CP001843.1 Genbank gene 1065082 1067280 . + . ID=gene1004;Name=fdhA;gbkey=Gene;gene=fdhA;gene_biotype=protein_coding;locus_tag=TREPR_3099 CP001843.1 Genbank CDS 1065082 1067280 . + 0 ID=cds954;Parent=gene1004;Dbxref=NCBI_GP:AEF86445.1;Name=AEF86445.1;Note=identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04879%3B match to protein family HMM TIGR01591;gbkey=CDS;gene=fdhA;product=formate dehydrogenase%2C alpha subunit;protein_id=AEF86445.1;transl_table=11 CP001843.1 Genbank gene 1067277 1067795 . + . ID=gene1005;Name=TREPR_3098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3098 CP001843.1 Genbank CDS 1067277 1067795 . + 0 ID=cds955;Parent=gene1005;Dbxref=NCBI_GP:AEF85987.1;Name=AEF85987.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=protein AegA;protein_id=AEF85987.1;transl_table=11 CP001843.1 Genbank gene 1067822 1068559 . + . ID=gene1006;Name=TREPR_3097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3097 CP001843.1 Genbank CDS 1067822 1068559 . + 0 ID=cds956;Parent=gene1006;Dbxref=NCBI_GP:AEF84576.1;Name=AEF84576.1;Note=identified by match to protein family HMM PF02634;gbkey=CDS;product=phenylacetyl CoA;protein_id=AEF84576.1;transl_table=11 CP001843.1 Genbank gene 1068556 1068936 . + . ID=gene1007;Name=TREPR_3096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3096 CP001843.1 Genbank CDS 1068556 1068936 . + 0 ID=cds957;Parent=gene1007;Dbxref=NCBI_GP:AEF83948.1;Name=AEF83948.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83948.1;transl_table=11 CP001843.1 Genbank gene 1068951 1069496 . + . ID=gene1008;Name=TREPR_3095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3095 CP001843.1 Genbank CDS 1068951 1069496 . + 0 ID=cds958;Parent=gene1008;Dbxref=NCBI_GP:AEF86935.1;Name=AEF86935.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=protein AegA;protein_id=AEF86935.1;transl_table=11 CP001843.1 Genbank gene 1069499 1070863 . + . ID=gene1009;Name=TREPR_3094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3094 CP001843.1 Genbank CDS 1069499 1070863 . + 0 ID=cds959;Parent=gene1009;Dbxref=NCBI_GP:AEF86774.1;Name=AEF86774.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF02256%3B match to protein family HMM PF02906%3B match to protein family HMM TIGR02512;gbkey=CDS;product=iron hydrogenase 1 ([Fe] hydrogenase) (Fe-onlyhydrogenase) (CpI);protein_id=AEF86774.1;transl_table=11 CP001843.1 Genbank gene 1070856 1071467 . + . ID=gene1010;Name=TREPR_3093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3093 CP001843.1 Genbank CDS 1070856 1071467 . + 0 ID=cds960;Parent=gene1010;Dbxref=NCBI_GP:AEF85783.1;Name=AEF85783.1;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein A;protein_id=AEF85783.1;transl_table=11 CP001843.1 Genbank gene 1071468 1071587 . - . ID=gene1011;Name=TREPR_3092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3092 CP001843.1 Genbank CDS 1071468 1071587 . - 0 ID=cds961;Parent=gene1011;Dbxref=NCBI_GP:AEF83535.1;Name=AEF83535.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83535.1;transl_table=11 CP001843.1 Genbank gene 1071559 1072356 . - . ID=gene1012;Name=TREPR_3091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3091 CP001843.1 Genbank CDS 1071559 1072356 . - 0 ID=cds962;Parent=gene1012;Dbxref=NCBI_GP:AEF86517.1;Name=AEF86517.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;product=(R)-2-hydroxyglutaryl-CoA dehydratase activator;protein_id=AEF86517.1;transl_table=11 CP001843.1 Genbank gene 1072357 1073511 . - . ID=gene1013;Name=TREPR_3090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3090 CP001843.1 Genbank CDS 1072357 1073511 . - 0 ID=cds963;Parent=gene1013;Dbxref=NCBI_GP:AEF85261.1;Name=AEF85261.1;Note=identified by match to protein family HMM PF06050;gbkey=CDS;product=2-hydroxyglutaryl-CoA dehydratase%2C D-component;protein_id=AEF85261.1;transl_table=11 CP001843.1 Genbank gene 1073537 1074343 . - . ID=gene1014;Name=TREPR_3089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3089 CP001843.1 Genbank CDS 1073537 1074343 . - 0 ID=cds964;Parent=gene1014;Dbxref=NCBI_GP:AEF84247.1;Name=AEF84247.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=L-cystine import ATP-binding protein TcyN;protein_id=AEF84247.1;transl_table=11 CP001843.1 Genbank gene 1074423 1075232 . - . ID=gene1015;Name=TREPR_3088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3088 CP001843.1 Genbank CDS 1074423 1075232 . - 0 ID=cds965;Parent=gene1015;Dbxref=NCBI_GP:AEF87038.1;Name=AEF87038.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=probable amino-acid ABC transporter%2Csubstrate-binding protein;protein_id=AEF87038.1;transl_table=11 CP001843.1 Genbank gene 1075306 1075971 . - . ID=gene1016;Name=TREPR_3087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3087 CP001843.1 Genbank CDS 1075306 1075971 . - 0 ID=cds966;Parent=gene1016;Dbxref=NCBI_GP:AEF84624.1;Name=AEF84624.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=L-cystine transport system permease protein TcyB;protein_id=AEF84624.1;transl_table=11 CP001843.1 Genbank gene 1075961 1076152 . - . ID=gene1017;Name=TREPR_3086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3086 CP001843.1 Genbank CDS 1075961 1076152 . - 0 ID=cds967;Parent=gene1017;Dbxref=NCBI_GP:AEF85632.1;Name=AEF85632.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85632.1;transl_table=11 CP001843.1 Genbank gene 1076276 1076404 . + . ID=gene1018;Name=TREPR_3085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3085 CP001843.1 Genbank CDS 1076276 1076404 . + 0 ID=cds968;Parent=gene1018;Dbxref=NCBI_GP:AEF85824.1;Name=AEF85824.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85824.1;transl_table=11 CP001843.1 Genbank gene 1076415 1077893 . + . ID=gene1019;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=TREPR_3084 CP001843.1 Genbank CDS 1076415 1077893 . + 0 ID=cds969;Parent=gene1019;Dbxref=NCBI_GP:AEF84077.1;Name=AEF84077.1;Note=identified by match to protein family HMM PF03841%3B match to protein family HMM TIGR00474;gbkey=CDS;gene=selA;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=AEF84077.1;transl_table=11 CP001843.1 Genbank gene 1077895 1079853 . + . ID=gene1020;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=TREPR_3083 CP001843.1 Genbank CDS 1077895 1079853 . + 0 ID=cds970;Parent=gene1020;Dbxref=NCBI_GP:AEF85047.1;Name=AEF85047.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM PF09107%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00475;gbkey=CDS;gene=selB;product=selenocysteine-specific translation elongation factor;protein_id=AEF85047.1;transl_table=11 CP001843.1 Genbank gene 1079907 1081100 . - . ID=gene1021;Name=TREPR_3082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3082 CP001843.1 Genbank CDS 1079907 1081100 . - 0 ID=cds971;Parent=gene1021;Dbxref=NCBI_GP:AEF86068.1;Name=AEF86068.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM PF01053%3B match to protein family HMM TIGR01977;gbkey=CDS;product=cysteine desulfurase family protein;protein_id=AEF86068.1;transl_table=11 CP001843.1 Genbank gene 1081108 1081731 . - . ID=gene1022;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=TREPR_3081 CP001843.1 Genbank CDS 1081108 1081731 . - 0 ID=cds972;Parent=gene1022;Dbxref=NCBI_GP:AEF86199.1;Name=AEF86199.1;Note=identified by match to protein family HMM PF01206%3B match to protein family HMM TIGR03527;gbkey=CDS;gene=yedF;product=selenium metabolism protein YedF;protein_id=AEF86199.1;transl_table=11 CP001843.1 Genbank gene 1081754 1082806 . - . ID=gene1023;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=TREPR_3080 CP001843.1 Genbank CDS 1081754 1082806 . - 0 ID=cds973;Parent=gene1023;Dbxref=NCBI_GP:AEF86744.1;Name=AEF86744.1;Note=identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR00476;gbkey=CDS;gene=selD;product=selenide%2C water dikinase;protein_id=AEF86744.1;transl_table=11 CP001843.1 Genbank gene 1082790 1083086 . - . ID=gene1024;Name=TREPR_3079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3079 CP001843.1 Genbank CDS 1082790 1083086 . - 0 ID=cds974;Parent=gene1024;Dbxref=NCBI_GP:AEF83993.1;Name=AEF83993.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83993.1;transl_table=11 CP001843.1 Genbank gene 1083137 1083230 . - . ID=gene1025;Name=TREPR_3943;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3943 CP001843.1 Genbank tRNA 1083137 1083230 . - . ID=rna19;Parent=gene1025;gbkey=tRNA;product=tRNA-Sec CP001843.1 Genbank exon 1083137 1083230 . - . ID=id24;Parent=rna19;gbkey=tRNA;product=tRNA-Sec CP001843.1 Genbank gene 1083258 1083428 . + . ID=gene1026;Name=TREPR_3077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3077 CP001843.1 Genbank CDS 1083258 1083428 . + 0 ID=cds975;Parent=gene1026;Dbxref=NCBI_GP:AEF85061.1;Name=AEF85061.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85061.1;transl_table=11 CP001843.1 Genbank gene 1083473 1084651 . + . ID=gene1027;Name=TREPR_3076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3076 CP001843.1 Genbank CDS 1083473 1084651 . + 0 ID=cds976;Parent=gene1027;Dbxref=NCBI_GP:AEF84256.1;Name=AEF84256.1;Note=identified by match to protein family HMM PF02133;gbkey=CDS;product=purine-cytosine permease-like protein;protein_id=AEF84256.1;transl_table=11 CP001843.1 Genbank pseudogene 1084851 1085285 . + . ID=gene1028;Name=TREPR_3075;Note=formate dehydrogenase H%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF04879;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3075;pseudo=true CP001843.1 Genbank pseudogene 1085334 1087043 . + . ID=gene1029;Name=TREPR_3074;Note=formate dehydrogenase H%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_3074;pseudo=true CP001843.1 Genbank gene 1087167 1088594 . + . ID=gene1030;Name=TREPR_3073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3073 CP001843.1 Genbank CDS 1087167 1088594 . + 0 ID=cds977;Parent=gene1030;Dbxref=NCBI_GP:AEF85375.1;Name=AEF85375.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85375.1;transl_table=11 CP001843.1 Genbank gene 1088597 1090063 . + . ID=gene1031;Name=TREPR_3072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3072 CP001843.1 Genbank CDS 1088597 1090063 . + 0 ID=cds978;Parent=gene1031;Dbxref=NCBI_GP:AEF84776.1;Name=AEF84776.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84776.1;transl_table=11 CP001843.1 Genbank gene 1090109 1092052 . + . ID=gene1032;Name=TREPR_3071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3071 CP001843.1 Genbank CDS 1090109 1092052 . + 0 ID=cds979;Parent=gene1032;Dbxref=NCBI_GP:AEF83806.1;Name=AEF83806.1;Note=identified by match to protein family HMM PF00111;gbkey=CDS;product=ferredoxin;protein_id=AEF83806.1;transl_table=11 CP001843.1 Genbank gene 1092045 1092740 . + . ID=gene1033;Name=TREPR_3070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3070 CP001843.1 Genbank CDS 1092045 1092740 . + 0 ID=cds980;Parent=gene1033;Dbxref=NCBI_GP:AEF85925.1;Name=AEF85925.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85925.1;transl_table=11 CP001843.1 Genbank gene 1092873 1094768 . + . ID=gene1034;Name=cooS;gbkey=Gene;gene=cooS;gene_biotype=protein_coding;locus_tag=TREPR_3069 CP001843.1 Genbank CDS 1092873 1094768 . + 0 ID=cds981;Parent=gene1034;Dbxref=NCBI_GP:AEF84037.1;Name=AEF84037.1;Note=identified by match to protein family HMM PF03063%3B match to protein family HMM TIGR01702;gbkey=CDS;gene=cooS;product=carbon-monoxide dehydrogenase%2C catalytic subunit;protein_id=AEF84037.1;transl_table=11 CP001843.1 Genbank gene 1094768 1095541 . + . ID=gene1035;Name=TREPR_3068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3068 CP001843.1 Genbank CDS 1094768 1095541 . + 0 ID=cds982;Parent=gene1035;Dbxref=NCBI_GP:AEF83878.1;Name=AEF83878.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;product=carbon monoxide dehydrogenase accessory protein CooC;protein_id=AEF83878.1;transl_table=11 CP001843.1 Genbank gene 1095614 1097758 . + . ID=gene1036;Name=TREPR_3067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3067 CP001843.1 Genbank CDS 1095614 1097758 . + 0 ID=cds983;Parent=gene1036;Dbxref=NCBI_GP:AEF85971.1;Name=AEF85971.1;Note=identified by match to protein family HMM PF03598%3B match to protein family HMM TIGR00316;gbkey=CDS;product=carbon monoxide dehydrogenase/acetyl-coa synthase subunit alpha (acetyl-coa synthase subunit) (codh/acs) (acs subunit);protein_id=AEF85971.1;transl_table=11 CP001843.1 Genbank gene 1097840 1098784 . + . ID=gene1037;Name=TREPR_3066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3066 CP001843.1 Genbank CDS 1097840 1098784 . + 0 ID=cds984;Parent=gene1037;Dbxref=NCBI_GP:AEF84841.1;Name=AEF84841.1;gbkey=CDS;product=CO dehydrogenase/acetyl-CoA synthase delta subunit;protein_id=AEF84841.1;transl_table=11 CP001843.1 Genbank gene 1098797 1100128 . + . ID=gene1038;Name=TREPR_3065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3065 CP001843.1 Genbank CDS 1098797 1100128 . + 0 ID=cds985;Parent=gene1038;Dbxref=NCBI_GP:AEF86233.1;Name=AEF86233.1;Note=identified by match to protein family HMM PF03599%3B match to protein family HMM PF04060;gbkey=CDS;product=acetyl-coa decarbonylase/synthase complex subunit gamma (acds complex subunit gamma) (acds complex methyltransferase)(corrinoid/iron-sulfur component large subunit);protein_id=AEF86233.1;transl_table=11 CP001843.1 Genbank gene 1100195 1100980 . + . ID=gene1039;Name=TREPR_3064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3064 CP001843.1 Genbank CDS 1100195 1100980 . + 0 ID=cds986;Parent=gene1039;Dbxref=NCBI_GP:AEF85965.1;Name=AEF85965.1;Note=identified by match to protein family HMM PF00809;gbkey=CDS;product=dihydropteroate synthase DhpS;protein_id=AEF85965.1;transl_table=11 CP001843.1 Genbank gene 1100987 1101289 . - . ID=gene1040;Name=TREPR_3063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3063 CP001843.1 Genbank CDS 1100987 1101289 . - 0 ID=cds987;Parent=gene1040;Dbxref=NCBI_GP:AEF85311.1;Name=AEF85311.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85311.1;transl_table=11 CP001843.1 Genbank gene 1101356 1101526 . + . ID=gene1041;Name=TREPR_3062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3062 CP001843.1 Genbank CDS 1101356 1101526 . + 0 ID=cds988;Parent=gene1041;Dbxref=NCBI_GP:AEF85179.1;Name=AEF85179.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85179.1;transl_table=11 CP001843.1 Genbank gene 1101526 1101981 . + . ID=gene1042;Name=TREPR_3061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3061 CP001843.1 Genbank CDS 1101526 1101981 . + 0 ID=cds989;Parent=gene1042;Dbxref=NCBI_GP:AEF83822.1;Name=AEF83822.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83822.1;transl_table=11 CP001843.1 Genbank gene 1102079 1105090 . - . ID=gene1043;Name=TREPR_3060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3060 CP001843.1 Genbank CDS 1102079 1105090 . - 0 ID=cds990;Parent=gene1043;Dbxref=NCBI_GP:AEF86313.1;Name=AEF86313.1;Note=identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF01612%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593;gbkey=CDS;product=DNA-directed DNA polymerase;protein_id=AEF86313.1;transl_table=11 CP001843.1 Genbank gene 1105178 1106998 . - . ID=gene1044;Name=TREPR_3059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3059 CP001843.1 Genbank CDS 1105178 1106998 . - 0 ID=cds991;Parent=gene1044;Dbxref=NCBI_GP:AEF84783.1;Name=AEF84783.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis sensory transducer;protein_id=AEF84783.1;transl_table=11 CP001843.1 Genbank gene 1107002 1108237 . - . ID=gene1045;Name=TREPR_3058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3058 CP001843.1 Genbank CDS 1107002 1108237 . - 0 ID=cds992;Parent=gene1045;Dbxref=NCBI_GP:AEF86662.1;Name=AEF86662.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=metal dependent phosphohydrolase;protein_id=AEF86662.1;transl_table=11 CP001843.1 Genbank gene 1108290 1110563 . + . ID=gene1046;Name=TREPR_3057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3057 CP001843.1 Genbank CDS 1108290 1110563 . + 0 ID=cds993;Parent=gene1046;Dbxref=NCBI_GP:AEF86370.1;Name=AEF86370.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=Hpt sensor hybrid histidine kinase;protein_id=AEF86370.1;transl_table=11 CP001843.1 Genbank gene 1110645 1111250 . + . ID=gene1047;Name=TREPR_3056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3056 CP001843.1 Genbank CDS 1110645 1111250 . + 0 ID=cds994;Parent=gene1047;Dbxref=NCBI_GP:AEF85270.1;Name=AEF85270.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=response regulator receiver modulated metal dependent phosphohydrolase;protein_id=AEF85270.1;transl_table=11 CP001843.1 Genbank gene 1111311 1112606 . + . ID=gene1048;Name=TREPR_3055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3055 CP001843.1 Genbank CDS 1111311 1112606 . + 0 ID=cds995;Parent=gene1048;Dbxref=NCBI_GP:AEF84241.1;Name=AEF84241.1;Note=identified by match to protein family HMM PF02040%3B match to protein family HMM PF03600%3B match to protein family HMM PF06808;gbkey=CDS;product=putative arsenical pump membrane protein;protein_id=AEF84241.1;transl_table=11 CP001843.1 Genbank gene 1112637 1113812 . - . ID=gene1049;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=TREPR_3054 CP001843.1 Genbank CDS 1112637 1113812 . - 0 ID=cds996;Parent=gene1049;Dbxref=NCBI_GP:AEF86382.1;Name=AEF86382.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00202%3B match to protein family HMM TIGR00858;gbkey=CDS;gene=bioF;product=8-amino-7-oxononanoate synthase;protein_id=AEF86382.1;transl_table=11 CP001843.1 Genbank gene 1113817 1114575 . - . ID=gene1050;Name=bioW;gbkey=Gene;gene=bioW;gene_biotype=protein_coding;locus_tag=TREPR_3053 CP001843.1 Genbank CDS 1113817 1114575 . - 0 ID=cds997;Parent=gene1050;Dbxref=NCBI_GP:AEF85376.1;Name=AEF85376.1;Note=identified by match to protein family HMM PF03744%3B match to protein family HMM TIGR01204;gbkey=CDS;gene=bioW;product=6-carboxyhexanoate--CoA ligase;protein_id=AEF85376.1;transl_table=11 CP001843.1 Genbank gene 1114611 1115960 . - . ID=gene1051;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=TREPR_3052 CP001843.1 Genbank CDS 1114611 1115960 . - 0 ID=cds998;Parent=gene1051;Dbxref=NCBI_GP:AEF84625.1;Name=AEF84625.1;Note=identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00508;gbkey=CDS;gene=bioA;product=adenosylmethionine-8-amino-7-oxononanoate transaminase;protein_id=AEF84625.1;transl_table=11 CP001843.1 Genbank gene 1115970 1116668 . - . ID=gene1052;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=TREPR_3051 CP001843.1 Genbank CDS 1115970 1116668 . - 0 ID=cds999;Parent=gene1052;Dbxref=NCBI_GP:AEF86791.1;Name=AEF86791.1;Note=identified by match to protein family HMM TIGR00347;gbkey=CDS;gene=bioD;product=dethiobiotin synthase;protein_id=AEF86791.1;transl_table=11 CP001843.1 Genbank gene 1116736 1118556 . - . ID=gene1053;Name=TREPR_3050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3050 CP001843.1 Genbank CDS 1116736 1118556 . - 0 ID=cds1000;Parent=gene1053;Dbxref=NCBI_GP:AEF85809.1;Name=AEF85809.1;Note=identified by match to protein family HMM PF00821;gbkey=CDS;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=AEF85809.1;transl_table=11 CP001843.1 Genbank gene 1118717 1119067 . + . ID=gene1054;Name=TREPR_3048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3048 CP001843.1 Genbank CDS 1118717 1119067 . + 0 ID=cds1001;Parent=gene1054;Dbxref=NCBI_GP:AEF86079.1;Name=AEF86079.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86079.1;transl_table=11 CP001843.1 Genbank gene 1119064 1119453 . - . ID=gene1055;Name=TREPR_3049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3049 CP001843.1 Genbank CDS 1119064 1119453 . - 0 ID=cds1002;Parent=gene1055;Dbxref=NCBI_GP:AEF86778.1;Name=AEF86778.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86778.1;transl_table=11 CP001843.1 Genbank gene 1119838 1121661 . + . ID=gene1056;Name=TREPR_3046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3046 CP001843.1 Genbank CDS 1119838 1121661 . + 0 ID=cds1003;Parent=gene1056;Dbxref=NCBI_GP:AEF85366.1;Name=AEF85366.1;gbkey=CDS;product=clostridium cellulosome enzyme%2C dockerin type I;protein_id=AEF85366.1;transl_table=11 CP001843.1 Genbank gene 1121715 1122986 . - . ID=gene1057;Name=TREPR_3045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3045 CP001843.1 Genbank CDS 1121715 1122986 . - 0 ID=cds1004;Parent=gene1057;Dbxref=NCBI_GP:AEF86181.1;Name=AEF86181.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86181.1;transl_table=11 CP001843.1 Genbank gene 1123007 1123486 . + . ID=gene1058;Name=TREPR_3044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3044 CP001843.1 Genbank CDS 1123007 1123486 . + 0 ID=cds1005;Parent=gene1058;Dbxref=NCBI_GP:AEF86919.1;Name=AEF86919.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86919.1;transl_table=11 CP001843.1 Genbank gene 1123528 1124454 . + . ID=gene1059;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=TREPR_3043 CP001843.1 Genbank CDS 1123528 1124454 . + 0 ID=cds1006;Parent=gene1059;Dbxref=NCBI_GP:AEF84180.1;Name=AEF84180.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436;gbkey=CDS;gene=era;product=GTP-binding protein Era;protein_id=AEF84180.1;transl_table=11 CP001843.1 Genbank gene 1124467 1125084 . - . ID=gene1060;Name=thrH;gbkey=Gene;gene=thrH;gene_biotype=protein_coding;locus_tag=TREPR_3042 CP001843.1 Genbank CDS 1124467 1125084 . - 0 ID=cds1007;Parent=gene1060;Dbxref=NCBI_GP:AEF84877.1;Name=AEF84877.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR02137;gbkey=CDS;gene=thrH;product=phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein;protein_id=AEF84877.1;transl_table=11 CP001843.1 Genbank gene 1125652 1126407 . + . ID=gene1061;Name=TREPR_3041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3041 CP001843.1 Genbank CDS 1125652 1126407 . + 0 ID=cds1008;Parent=gene1061;Dbxref=NCBI_GP:AEF85708.1;Name=AEF85708.1;Note=identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00121;gbkey=CDS;product=biotin-(acetyl-CoA-carboxylase) ligase;protein_id=AEF85708.1;transl_table=11 CP001843.1 Genbank gene 1126444 1127265 . + . ID=gene1062;Name=TREPR_3040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3040 CP001843.1 Genbank CDS 1126444 1127265 . + 0 ID=cds1009;Parent=gene1062;Dbxref=NCBI_GP:AEF86458.1;Name=AEF86458.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86458.1;transl_table=11 CP001843.1 Genbank gene 1127269 1128135 . - . ID=gene1063;Name=TREPR_3039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3039 CP001843.1 Genbank CDS 1127269 1128135 . - 0 ID=cds1010;Parent=gene1063;Dbxref=NCBI_GP:AEF84847.1;Name=AEF84847.1;gbkey=CDS;product=metallophosphoesterase;protein_id=AEF84847.1;transl_table=11 CP001843.1 Genbank gene 1128278 1129039 . - . ID=gene1064;Name=TREPR_3038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3038 CP001843.1 Genbank CDS 1128278 1129039 . - 0 ID=cds1011;Parent=gene1064;Dbxref=NCBI_GP:AEF86437.1;Name=AEF86437.1;Note=identified by match to protein family HMM PF04794;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86437.1;transl_table=11 CP001843.1 Genbank gene 1129052 1130677 . - . ID=gene1065;Name=TREPR_3037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3037 CP001843.1 Genbank CDS 1129052 1130677 . - 0 ID=cds1012;Parent=gene1065;Dbxref=NCBI_GP:AEF86866.1;Name=AEF86866.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=Fe3+ ABC transporter permease;protein_id=AEF86866.1;transl_table=11 CP001843.1 Genbank gene 1130700 1131797 . - . ID=gene1066;Name=TREPR_3036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3036 CP001843.1 Genbank CDS 1130700 1131797 . - 0 ID=cds1013;Parent=gene1066;Dbxref=NCBI_GP:AEF84365.1;Name=AEF84365.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=AEF84365.1;transl_table=11 CP001843.1 Genbank gene 1131825 1132892 . - . ID=gene1067;Name=TREPR_3035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3035 CP001843.1 Genbank CDS 1131825 1132892 . - 0 ID=cds1014;Parent=gene1067;Dbxref=NCBI_GP:AEF84731.1;Name=AEF84731.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=extracellular solute-binding protein%2C family 1;protein_id=AEF84731.1;transl_table=11 CP001843.1 Genbank gene 1132993 1134429 . - . ID=gene1068;Name=TREPR_3034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3034 CP001843.1 Genbank CDS 1132993 1134429 . - 0 ID=cds1015;Parent=gene1068;Dbxref=NCBI_GP:AEF85838.1;Name=AEF85838.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85838.1;transl_table=11 CP001843.1 Genbank gene 1134458 1134580 . + . ID=gene1069;Name=TREPR_3033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3033 CP001843.1 Genbank CDS 1134458 1134580 . + 0 ID=cds1016;Parent=gene1069;Dbxref=NCBI_GP:AEF86185.1;Name=AEF86185.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86185.1;transl_table=11 CP001843.1 Genbank gene 1134598 1136127 . - . ID=gene1070;Name=TREPR_3032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3032 CP001843.1 Genbank CDS 1134598 1136127 . - 0 ID=cds1017;Parent=gene1070;Dbxref=NCBI_GP:AEF83926.1;Name=AEF83926.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM PF08668%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83926.1;transl_table=11 CP001843.1 Genbank gene 1136241 1137221 . - . ID=gene1071;Name=TREPR_3031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3031 CP001843.1 Genbank CDS 1136241 1137221 . - 0 ID=cds1018;Parent=gene1071;Dbxref=NCBI_GP:AEF85104.1;Name=AEF85104.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF85104.1;transl_table=11 CP001843.1 Genbank gene 1137214 1138248 . - . ID=gene1072;Name=TREPR_3030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3030 CP001843.1 Genbank CDS 1137214 1138248 . - 0 ID=cds1019;Parent=gene1072;Dbxref=NCBI_GP:AEF85758.1;Name=AEF85758.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=dipeptide transport ATP-binding protein DppD;protein_id=AEF85758.1;transl_table=11 CP001843.1 Genbank gene 1138258 1139169 . - . ID=gene1073;Name=TREPR_3029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3029 CP001843.1 Genbank CDS 1138258 1139169 . - 0 ID=cds1020;Parent=gene1073;Dbxref=NCBI_GP:AEF86732.1;Name=AEF86732.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=glutathione transport system permease protein GsiD;protein_id=AEF86732.1;transl_table=11 CP001843.1 Genbank gene 1139162 1140133 . - . ID=gene1074;Name=TREPR_3028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3028 CP001843.1 Genbank CDS 1139162 1140133 . - 0 ID=cds1021;Parent=gene1074;Dbxref=NCBI_GP:AEF83849.1;Name=AEF83849.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein AppB;protein_id=AEF83849.1;transl_table=11 CP001843.1 Genbank gene 1140245 1141867 . - . ID=gene1075;Name=TREPR_3027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3027 CP001843.1 Genbank CDS 1140245 1141867 . - 0 ID=cds1022;Parent=gene1075;Dbxref=NCBI_GP:AEF85859.1;Name=AEF85859.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=oligopeptide ABC transporter substrate-binding protein;protein_id=AEF85859.1;transl_table=11 CP001843.1 Genbank gene 1142182 1143798 . - . ID=gene1076;Name=TREPR_3026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3026 CP001843.1 Genbank CDS 1142182 1143798 . - 0 ID=cds1023;Parent=gene1076;Dbxref=NCBI_GP:AEF86352.1;Name=AEF86352.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=oligopeptide ABC transporter substrate-binding protein;protein_id=AEF86352.1;transl_table=11 CP001843.1 Genbank gene 1143947 1144315 . + . ID=gene1077;Name=TREPR_3025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3025 CP001843.1 Genbank CDS 1143947 1144315 . + 0 ID=cds1024;Parent=gene1077;Dbxref=NCBI_GP:AEF84339.1;Name=AEF84339.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84339.1;transl_table=11 CP001843.1 Genbank gene 1144343 1144708 . + . ID=gene1078;Name=TREPR_3024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3024 CP001843.1 Genbank CDS 1144343 1144708 . + 0 ID=cds1025;Parent=gene1078;Dbxref=NCBI_GP:AEF83872.1;Name=AEF83872.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83872.1;transl_table=11 CP001843.1 Genbank gene 1144721 1145719 . + . ID=gene1079;Name=TREPR_3023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3023 CP001843.1 Genbank CDS 1144721 1145719 . + 0 ID=cds1026;Parent=gene1079;Dbxref=NCBI_GP:AEF84455.1;Name=AEF84455.1;Note=identified by match to protein family HMM PF00248;gbkey=CDS;product=oxidoreductase%2C aldo/keto reductase family;protein_id=AEF84455.1;transl_table=11 CP001843.1 Genbank gene 1145745 1146857 . + . ID=gene1080;Name=TREPR_3021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3021 CP001843.1 Genbank CDS 1145745 1146857 . + 0 ID=cds1027;Parent=gene1080;Dbxref=NCBI_GP:AEF86463.1;Name=AEF86463.1;gbkey=CDS;product=peptidase M29%2C aminopeptidase II;protein_id=AEF86463.1;transl_table=11 CP001843.1 Genbank gene 1146850 1148304 . - . ID=gene1081;Name=TREPR_3022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3022 CP001843.1 Genbank CDS 1146850 1148304 . - 0 ID=cds1028;Parent=gene1081;Dbxref=NCBI_GP:AEF86802.1;Name=AEF86802.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01887;gbkey=CDS;product=Xaa-His dipeptidase;protein_id=AEF86802.1;transl_table=11 CP001843.1 Genbank gene 1148398 1149444 . + . ID=gene1082;Name=TREPR_3020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3020 CP001843.1 Genbank CDS 1148398 1149444 . + 0 ID=cds1029;Parent=gene1082;Dbxref=NCBI_GP:AEF83655.1;Name=AEF83655.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83655.1;transl_table=11 CP001843.1 Genbank gene 1149448 1149540 . - . ID=gene1083;Name=TREPR_3019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3019 CP001843.1 Genbank CDS 1149448 1149540 . - 0 ID=cds1030;Parent=gene1083;Dbxref=NCBI_GP:AEF84405.1;Name=AEF84405.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84405.1;transl_table=11 CP001843.1 Genbank gene 1149482 1150870 . + . ID=gene1084;Name=TREPR_3018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3018 CP001843.1 Genbank CDS 1149482 1150870 . + 0 ID=cds1031;Parent=gene1084;Dbxref=NCBI_GP:AEF85712.1;Name=AEF85712.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF85712.1;transl_table=11 CP001843.1 Genbank gene 1150878 1151633 . - . ID=gene1085;Name=TREPR_3017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3017 CP001843.1 Genbank CDS 1150878 1151633 . - 0 ID=cds1032;Parent=gene1085;Dbxref=NCBI_GP:AEF87033.1;Name=AEF87033.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter%2C ATP-binding protein;protein_id=AEF87033.1;transl_table=11 CP001843.1 Genbank gene 1151637 1152305 . - . ID=gene1086;Name=TREPR_3016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3016 CP001843.1 Genbank CDS 1151637 1152305 . - 0 ID=cds1033;Parent=gene1086;Dbxref=NCBI_GP:AEF83544.1;Name=AEF83544.1;Note=identified by match to protein family HMM PF03968;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83544.1;transl_table=11 CP001843.1 Genbank gene 1152296 1153033 . - . ID=gene1087;Name=TREPR_3015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3015 CP001843.1 Genbank CDS 1152296 1153033 . - 0 ID=cds1034;Parent=gene1087;Dbxref=NCBI_GP:AEF84506.1;Name=AEF84506.1;Note=identified by match to protein family HMM PF06835;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84506.1;transl_table=11 CP001843.1 Genbank gene 1153057 1154685 . - . ID=gene1088;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=TREPR_3014 CP001843.1 Genbank CDS 1153057 1154685 . - 0 ID=cds1035;Parent=gene1088;Dbxref=NCBI_GP:AEF85546.1;Name=AEF85546.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF06418%3B match to protein family HMM TIGR00337;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=AEF85546.1;transl_table=11 CP001843.1 Genbank gene 1154856 1155677 . + . ID=gene1089;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=TREPR_3013 CP001843.1 Genbank CDS 1154856 1155677 . + 0 ID=cds1036;Parent=gene1089;Dbxref=NCBI_GP:AEF85815.1;Name=AEF85815.1;Note=identified by match to protein family HMM PF01739%3B match to protein family HMM PF03705;gbkey=CDS;gene=cheR;product=CheR methyltransferase%2C SAM-binding domain protein;protein_id=AEF85815.1;transl_table=11 CP001843.1 Genbank gene 1155709 1156863 . + . ID=gene1090;Name=TREPR_3012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3012 CP001843.1 Genbank CDS 1155709 1156863 . + 0 ID=cds1037;Parent=gene1090;Dbxref=NCBI_GP:AEF86772.1;Name=AEF86772.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01339;gbkey=CDS;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=AEF86772.1;transl_table=11 CP001843.1 Genbank gene 1156939 1157682 . + . ID=gene1091;Name=TREPR_3011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3011 CP001843.1 Genbank CDS 1156939 1157682 . + 0 ID=cds1038;Parent=gene1091;Dbxref=NCBI_GP:AEF84223.1;Name=AEF84223.1;Note=identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;product=putative methyltransferase type 11;protein_id=AEF84223.1;transl_table=11 CP001843.1 Genbank gene 1157725 1158669 . - . ID=gene1092;Name=TREPR_3010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3010 CP001843.1 Genbank CDS 1157725 1158669 . - 0 ID=cds1039;Parent=gene1092;Dbxref=NCBI_GP:AEF85215.1;Name=AEF85215.1;Note=identified by match to protein family HMM PF04468;gbkey=CDS;product=Tpl protein;protein_id=AEF85215.1;transl_table=11 CP001843.1 Genbank gene 1158734 1159288 . - . ID=gene1093;Name=TREPR_3009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3009 CP001843.1 Genbank CDS 1158734 1159288 . - 0 ID=cds1040;Parent=gene1093;Dbxref=NCBI_GP:AEF85351.1;Name=AEF85351.1;Note=identified by match to protein family HMM PF03885;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85351.1;transl_table=11 CP001843.1 Genbank gene 1159281 1159739 . - . ID=gene1094;Name=TREPR_3008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3008 CP001843.1 Genbank CDS 1159281 1159739 . - 0 ID=cds1041;Parent=gene1094;Dbxref=NCBI_GP:AEF86431.1;Name=AEF86431.1;Note=identified by match to protein family HMM PF04519;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86431.1;transl_table=11 CP001843.1 Genbank gene 1159770 1160810 . - . ID=gene1095;Name=TREPR_3007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3007 CP001843.1 Genbank CDS 1159770 1160810 . - 0 ID=cds1042;Parent=gene1095;Dbxref=NCBI_GP:AEF86873.1;Name=AEF86873.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;product=M23/M37 peptidase domain protein;protein_id=AEF86873.1;transl_table=11 CP001843.1 Genbank gene 1161064 1162014 . + . ID=gene1096;Name=TREPR_3006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3006 CP001843.1 Genbank CDS 1161064 1162014 . + 0 ID=cds1043;Parent=gene1096;Dbxref=NCBI_GP:AEF85784.1;Name=AEF85784.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85784.1;transl_table=11 CP001843.1 Genbank gene 1162011 1163552 . + . ID=gene1097;Name=TREPR_3005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3005 CP001843.1 Genbank CDS 1162011 1163552 . + 0 ID=cds1044;Parent=gene1097;Dbxref=NCBI_GP:AEF84400.1;Name=AEF84400.1;Note=identified by match to protein family HMM PF00672%3B match to protein family HMM PF02518%3B match to protein family HMM PF06580;gbkey=CDS;product=putative histidine kinase internal region;protein_id=AEF84400.1;transl_table=11 CP001843.1 Genbank gene 1163545 1165044 . + . ID=gene1098;Name=TREPR_3004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3004 CP001843.1 Genbank CDS 1163545 1165044 . + 0 ID=cds1045;Parent=gene1098;Dbxref=NCBI_GP:AEF83640.1;Name=AEF83640.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165;gbkey=CDS;product=Two-component response regulator;protein_id=AEF83640.1;transl_table=11 CP001843.1 Genbank gene 1165025 1166143 . + . ID=gene1099;Name=TREPR_3003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3003 CP001843.1 Genbank CDS 1165025 1166143 . + 0 ID=cds1046;Parent=gene1099;Dbxref=NCBI_GP:AEF86381.1;Name=AEF86381.1;gbkey=CDS;product=D-xylose-binding protein;protein_id=AEF86381.1;transl_table=11 CP001843.1 Genbank gene 1166109 1166252 . + . ID=gene1100;Name=TREPR_3002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3002 CP001843.1 Genbank CDS 1166109 1166252 . + 0 ID=cds1047;Parent=gene1100;Dbxref=NCBI_GP:AEF85392.1;Name=AEF85392.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85392.1;transl_table=11 CP001843.1 Genbank gene 1166292 1167440 . + . ID=gene1101;Name=TREPR_3001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3001 CP001843.1 Genbank CDS 1166292 1167440 . + 0 ID=cds1048;Parent=gene1101;Dbxref=NCBI_GP:AEF85733.1;Name=AEF85733.1;gbkey=CDS;product=ABC transporter;protein_id=AEF85733.1;transl_table=11 CP001843.1 Genbank gene 1167547 1169073 . + . ID=gene1102;Name=TREPR_3000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_3000 CP001843.1 Genbank CDS 1167547 1169073 . + 0 ID=cds1049;Parent=gene1102;Dbxref=NCBI_GP:AEF85191.1;Name=AEF85191.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=xylose import ATP-binding protein XylG;protein_id=AEF85191.1;transl_table=11 CP001843.1 Genbank gene 1169115 1170308 . + . ID=gene1103;Name=TREPR_2999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2999 CP001843.1 Genbank CDS 1169115 1170308 . + 0 ID=cds1050;Parent=gene1103;Dbxref=NCBI_GP:AEF83829.1;Name=AEF83829.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=L-arabinose ABC transporter;protein_id=AEF83829.1;transl_table=11 CP001843.1 Genbank gene 1170460 1171461 . + . ID=gene1104;Name=TREPR_2998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2998 CP001843.1 Genbank CDS 1170460 1171461 . + 0 ID=cds1051;Parent=gene1104;Dbxref=NCBI_GP:AEF86807.1;Name=AEF86807.1;Note=identified by match to protein family HMM PF01208;gbkey=CDS;product=uroporphyrinogen decarboxylase (URO-D) superfamily;protein_id=AEF86807.1;transl_table=11 CP001843.1 Genbank gene 1171653 1173746 . + . ID=gene1105;Name=fusA_1;gbkey=Gene;gene=fusA_1;gene_biotype=protein_coding;locus_tag=TREPR_2997 CP001843.1 Genbank CDS 1171653 1173746 . + 0 ID=cds1052;Parent=gene1105;Dbxref=NCBI_GP:AEF84215.1;Name=AEF84215.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484;gbkey=CDS;gene=fusA_1;product=translation elongation factor G;protein_id=AEF84215.1;transl_table=11 CP001843.1 Genbank gene 1173752 1174453 . + . ID=gene1106;Name=TREPR_2996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2996 CP001843.1 Genbank CDS 1173752 1174453 . + 0 ID=cds1053;Parent=gene1106;Dbxref=NCBI_GP:AEF86927.1;Name=AEF86927.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86927.1;transl_table=11 CP001843.1 Genbank gene 1174476 1177706 . + . ID=gene1107;Name=TREPR_2995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2995 CP001843.1 Genbank CDS 1174476 1177706 . + 0 ID=cds1054;Parent=gene1107;Dbxref=NCBI_GP:AEF85322.1;Name=AEF85322.1;Note=identified by match to protein family HMM PF00400%3B match to protein family HMM PF00656;gbkey=CDS;product=NB-ARC domain protein;protein_id=AEF85322.1;transl_table=11 CP001843.1 Genbank gene 1177721 1178242 . - . ID=gene1108;Name=TREPR_2994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2994 CP001843.1 Genbank CDS 1177721 1178242 . - 0 ID=cds1055;Parent=gene1108;Dbxref=NCBI_GP:AEF84508.1;Name=AEF84508.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=nitroreductase family protein;protein_id=AEF84508.1;transl_table=11 CP001843.1 Genbank gene 1178303 1179277 . - . ID=gene1109;Name=TREPR_2993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2993 CP001843.1 Genbank CDS 1178303 1179277 . - 0 ID=cds1056;Parent=gene1109;Dbxref=NCBI_GP:AEF84810.1;Name=AEF84810.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF01408%3B match to protein family HMM PF02894;gbkey=CDS;product=oxidoreductase domain protein;protein_id=AEF84810.1;transl_table=11 CP001843.1 Genbank gene 1179312 1180415 . - . ID=gene1110;Name=TREPR_2992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2992 CP001843.1 Genbank CDS 1179312 1180415 . - 0 ID=cds1057;Parent=gene1110;Dbxref=NCBI_GP:AEF83621.1;Name=AEF83621.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=PfkB domain protein;protein_id=AEF83621.1;transl_table=11 CP001843.1 Genbank gene 1180412 1181077 . - . ID=gene1111;Name=TREPR_2991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2991 CP001843.1 Genbank CDS 1180412 1181077 . - 0 ID=cds1058;Parent=gene1111;Dbxref=NCBI_GP:AEF85863.1;Name=AEF85863.1;Note=identified by match to protein family HMM PF01081%3B match to protein family HMM TIGR01182;gbkey=CDS;product=khg/kdpg aldolase;protein_id=AEF85863.1;transl_table=11 CP001843.1 Genbank gene 1181197 1182015 . + . ID=gene1112;Name=TREPR_2990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2990 CP001843.1 Genbank CDS 1181197 1182015 . + 0 ID=cds1059;Parent=gene1112;Dbxref=NCBI_GP:AEF85604.1;Name=AEF85604.1;Note=identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339;gbkey=CDS;product=transcriptional regulator%2C IclR family;protein_id=AEF85604.1;transl_table=11 CP001843.1 Genbank gene 1182140 1183444 . + . ID=gene1113;Name=TREPR_2989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2989 CP001843.1 Genbank CDS 1182140 1183444 . + 0 ID=cds1060;Parent=gene1113;Dbxref=NCBI_GP:AEF84878.1;Name=AEF84878.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=extracellular solute-binding protein family 1;protein_id=AEF84878.1;transl_table=11 CP001843.1 Genbank gene 1183467 1184345 . + . ID=gene1114;Name=TREPR_2988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2988 CP001843.1 Genbank CDS 1183467 1184345 . + 0 ID=cds1061;Parent=gene1114;Dbxref=NCBI_GP:AEF84178.1;Name=AEF84178.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF84178.1;transl_table=11 CP001843.1 Genbank gene 1184348 1185193 . + . ID=gene1115;Name=TREPR_2987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2987 CP001843.1 Genbank CDS 1184348 1185193 . + 0 ID=cds1062;Parent=gene1115;Dbxref=NCBI_GP:AEF85787.1;Name=AEF85787.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF85787.1;transl_table=11 CP001843.1 Genbank gene 1185213 1187570 . + . ID=gene1116;Name=TREPR_2986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2986 CP001843.1 Genbank CDS 1185213 1187570 . + 0 ID=cds1063;Parent=gene1116;Dbxref=NCBI_GP:AEF84788.1;Name=AEF84788.1;Note=identified by match to protein family HMM PF01301;gbkey=CDS;product=beta-galactosidase;protein_id=AEF84788.1;transl_table=11 CP001843.1 Genbank gene 1187608 1188756 . + . ID=gene1117;Name=TREPR_2985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2985 CP001843.1 Genbank CDS 1187608 1188756 . + 0 ID=cds1064;Parent=gene1117;Dbxref=NCBI_GP:AEF83821.1;Name=AEF83821.1;Note=identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746;gbkey=CDS;product=DgoA protein;protein_id=AEF83821.1;transl_table=11 CP001843.1 Genbank gene 1188760 1190628 . - . ID=gene1118;Name=TREPR_2984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2984 CP001843.1 Genbank CDS 1188760 1190628 . - 0 ID=cds1065;Parent=gene1118;Dbxref=NCBI_GP:AEF86189.1;Name=AEF86189.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;product=dead/deah box helicase domain protein;protein_id=AEF86189.1;transl_table=11 CP001843.1 Genbank gene 1190913 1191554 . - . ID=gene1119;Name=TREPR_2983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2983 CP001843.1 Genbank CDS 1190913 1191554 . - 0 ID=cds1066;Parent=gene1119;Dbxref=NCBI_GP:AEF84604.1;Name=AEF84604.1;Note=identified by match to protein family HMM PF02631;gbkey=CDS;product=putative RecA regulator RecX;protein_id=AEF84604.1;transl_table=11 CP001843.1 Genbank gene 1191596 1191988 . - . ID=gene1120;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=TREPR_2982 CP001843.1 Genbank CDS 1191596 1191988 . - 0 ID=cds1067;Parent=gene1120;Dbxref=NCBI_GP:AEF83620.1;Name=AEF83620.1;Note=identified by match to protein family HMM PF00380;gbkey=CDS;gene=rpsI;product=ribosomal protein S9;protein_id=AEF83620.1;transl_table=11 CP001843.1 Genbank gene 1192060 1192488 . - . ID=gene1121;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=TREPR_2981 CP001843.1 Genbank CDS 1192060 1192488 . - 0 ID=cds1068;Parent=gene1121;Dbxref=NCBI_GP:AEF84387.1;Name=AEF84387.1;Note=identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066;gbkey=CDS;gene=rplM;product=ribosomal protein L13;protein_id=AEF84387.1;transl_table=11 CP001843.1 Genbank gene 1192572 1192793 . - . ID=gene1122;Name=TREPR_2980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2980 CP001843.1 Genbank CDS 1192572 1192793 . - 0 ID=cds1069;Parent=gene1122;Dbxref=NCBI_GP:AEF86727.1;Name=AEF86727.1;gbkey=CDS;product=hypothetical membrane protein;protein_id=AEF86727.1;transl_table=11 CP001843.1 Genbank gene 1192809 1193108 . - . ID=gene1123;Name=TREPR_2979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2979 CP001843.1 Genbank CDS 1192809 1193108 . - 0 ID=cds1070;Parent=gene1123;Dbxref=NCBI_GP:AEF84848.1;Name=AEF84848.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84848.1;transl_table=11 CP001843.1 Genbank gene 1193430 1195610 . + . ID=gene1124;Name=TREPR_2978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2978 CP001843.1 Genbank CDS 1193430 1195610 . + 0 ID=cds1071;Parent=gene1124;Dbxref=NCBI_GP:AEF84101.1;Name=AEF84101.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=Mcp-2;protein_id=AEF84101.1;transl_table=11 CP001843.1 Genbank gene 1195629 1196744 . - . ID=gene1125;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=TREPR_2977 CP001843.1 Genbank CDS 1195629 1196744 . - 0 ID=cds1072;Parent=gene1125;Dbxref=NCBI_GP:AEF84844.1;Name=AEF84844.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR00978;gbkey=CDS;gene=asd;product=aspartate-semialdehyde dehydrogenase;protein_id=AEF84844.1;transl_table=11 CP001843.1 Genbank gene 1196826 1197758 . - . ID=gene1126;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=TREPR_2976 CP001843.1 Genbank CDS 1196826 1197758 . - 0 ID=cds1073;Parent=gene1126;Dbxref=NCBI_GP:AEF86495.1;Name=AEF86495.1;Note=identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674;gbkey=CDS;gene=dapA;product=dihydrodipicolinate synthase;protein_id=AEF86495.1;transl_table=11 CP001843.1 Genbank gene 1197837 1198646 . - . ID=gene1127;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=TREPR_2975 CP001843.1 Genbank CDS 1197837 1198646 . - 0 ID=cds1074;Parent=gene1127;Dbxref=NCBI_GP:AEF83772.1;Name=AEF83772.1;Note=identified by match to protein family HMM PF01113%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036;gbkey=CDS;gene=dapB;product=dihydrodipicolinate reductase;protein_id=AEF83772.1;transl_table=11 CP001843.1 Genbank gene 1198643 1199998 . - . ID=gene1128;Name=TREPR_2974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2974 CP001843.1 Genbank CDS 1198643 1199998 . - 0 ID=cds1075;Parent=gene1128;Dbxref=NCBI_GP:AEF84490.1;Name=AEF84490.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00657;gbkey=CDS;product=lysine-sensitive aspartokinase 3 (Lysine-sensitiveaspartokinase III) (Aspartate kinase III);protein_id=AEF84490.1;transl_table=11 CP001843.1 Genbank gene 1200139 1202064 . + . ID=gene1129;Name=TREPR_2973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2973 CP001843.1 Genbank CDS 1200139 1202064 . + 0 ID=cds1076;Parent=gene1129;Dbxref=NCBI_GP:AEF84496.1;Name=AEF84496.1;Note=identified by match to protein family HMM PF00773;gbkey=CDS;product=ribonuclease II family protein;protein_id=AEF84496.1;transl_table=11 CP001843.1 Genbank gene 1202140 1204503 . + . ID=gene1130;Name=TREPR_2972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2972 CP001843.1 Genbank CDS 1202140 1204503 . + 0 ID=cds1077;Parent=gene1130;Dbxref=NCBI_GP:AEF86080.1;Name=AEF86080.1;Note=identified by match to protein family HMM PF01584%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF02895%3B match to protein family HMM PF07194;gbkey=CDS;product=chemotaxis protein CheA;protein_id=AEF86080.1;transl_table=11 CP001843.1 Genbank gene 1204529 1205875 . + . ID=gene1131;Name=TREPR_2971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2971 CP001843.1 Genbank CDS 1204529 1205875 . + 0 ID=cds1078;Parent=gene1131;Dbxref=NCBI_GP:AEF86836.1;Name=AEF86836.1;Note=identified by match to protein family HMM PF01584%3B match to protein family HMM PF01739;gbkey=CDS;product=chemotaxis protein CheW;protein_id=AEF86836.1;transl_table=11 CP001843.1 Genbank gene 1205900 1206370 . + . ID=gene1132;Name=TREPR_2970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2970 CP001843.1 Genbank CDS 1205900 1206370 . + 0 ID=cds1079;Parent=gene1132;Dbxref=NCBI_GP:AEF84050.1;Name=AEF84050.1;Note=identified by match to protein family HMM PF04509;gbkey=CDS;product=chemotaxis protein CheX;protein_id=AEF84050.1;transl_table=11 CP001843.1 Genbank gene 1206491 1206564 . + . ID=gene1133;Name=TREPR_3942;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3942 CP001843.1 Genbank tRNA 1206491 1206564 . + . ID=rna20;Parent=gene1133;gbkey=tRNA;product=tRNA-Val CP001843.1 Genbank exon 1206491 1206564 . + . ID=id25;Parent=rna20;gbkey=tRNA;product=tRNA-Val CP001843.1 Genbank gene 1206725 1208146 . + . ID=gene1134;Name=TREPR_2968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2968 CP001843.1 Genbank CDS 1206725 1208146 . + 0 ID=cds1080;Parent=gene1134;Dbxref=NCBI_GP:AEF86442.1;Name=AEF86442.1;Note=identified by match to protein family HMM PF02302%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00851;gbkey=CDS;product=pts system mannitol-specific eiicba component;protein_id=AEF86442.1;transl_table=11 CP001843.1 Genbank gene 1208161 1208418 . + . ID=gene1135;Name=TREPR_2967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2967 CP001843.1 Genbank CDS 1208161 1208418 . + 0 ID=cds1081;Parent=gene1135;Dbxref=NCBI_GP:AEF83738.1;Name=AEF83738.1;Note=identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003;gbkey=CDS;product=phosphocarrier protein HPr;protein_id=AEF83738.1;transl_table=11 CP001843.1 Genbank gene 1208433 1210466 . + . ID=gene1136;Name=TREPR_2966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2966 CP001843.1 Genbank CDS 1208433 1210466 . + 0 ID=cds1082;Parent=gene1136;Dbxref=NCBI_GP:AEF85123.1;Name=AEF85123.1;Note=identified by match to protein family HMM PF00874%3B match to protein family HMM PF08279;gbkey=CDS;product=HTH domain protein;protein_id=AEF85123.1;transl_table=11 CP001843.1 Genbank gene 1210476 1210916 . + . ID=gene1137;Name=TREPR_2965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2965 CP001843.1 Genbank CDS 1210476 1210916 . + 0 ID=cds1083;Parent=gene1137;Dbxref=NCBI_GP:AEF85941.1;Name=AEF85941.1;Note=identified by match to protein family HMM PF00359;gbkey=CDS;product=pts system mannitol-specific eiicba component;protein_id=AEF85941.1;transl_table=11 CP001843.1 Genbank gene 1210913 1211887 . + . ID=gene1138;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=TREPR_2964 CP001843.1 Genbank CDS 1210913 1211887 . + 0 ID=cds1084;Parent=gene1138;Dbxref=NCBI_GP:AEF83564.1;Name=AEF83564.1;Note=identified by match to protein family HMM PF00294%3B match to protein family HMM TIGR03168;gbkey=CDS;gene=pfkB;product=1-phosphofructokinase;protein_id=AEF83564.1;transl_table=11 CP001843.1 Genbank gene 1212013 1213284 . + . ID=gene1139;Name=TREPR_2963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2963 CP001843.1 Genbank CDS 1212013 1213284 . + 0 ID=cds1085;Parent=gene1139;Dbxref=NCBI_GP:AEF84338.1;Name=AEF84338.1;Note=identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240;gbkey=CDS;product=L-sorbose 1-phosphate reductase;protein_id=AEF84338.1;transl_table=11 CP001843.1 Genbank gene 1213286 1214905 . + . ID=gene1140;Name=ptsP_2;gbkey=Gene;gene=ptsP_2;gene_biotype=protein_coding;locus_tag=TREPR_2962 CP001843.1 Genbank CDS 1213286 1214905 . + 0 ID=cds1086;Parent=gene1140;Dbxref=NCBI_GP:AEF86809.1;Name=AEF86809.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417;gbkey=CDS;gene=ptsP_2;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=AEF86809.1;transl_table=11 CP001843.1 Genbank gene 1215000 1215377 . + . ID=gene1141;Name=TREPR_2961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2961 CP001843.1 Genbank CDS 1215000 1215377 . + 0 ID=cds1087;Parent=gene1141;Dbxref=NCBI_GP:AEF83860.1;Name=AEF83860.1;Note=identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004;gbkey=CDS;product=putative endoribonuclease L-PSP;protein_id=AEF83860.1;transl_table=11 CP001843.1 Genbank gene 1215492 1216304 . - . ID=gene1142;Name=TREPR_2960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2960 CP001843.1 Genbank CDS 1215492 1216304 . - 0 ID=cds1088;Parent=gene1142;Dbxref=NCBI_GP:AEF85204.1;Name=AEF85204.1;Note=identified by match to protein family HMM PF08308;gbkey=CDS;product=PEGA domain protein;protein_id=AEF85204.1;transl_table=11 CP001843.1 Genbank gene 1216373 1217041 . - . ID=gene1143;Name=TREPR_2959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2959 CP001843.1 Genbank CDS 1216373 1217041 . - 0 ID=cds1089;Parent=gene1143;Dbxref=NCBI_GP:AEF85789.1;Name=AEF85789.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;product=cyclic nucleotide-binding protein;protein_id=AEF85789.1;transl_table=11 CP001843.1 Genbank gene 1217045 1217839 . + . ID=gene1144;Name=TREPR_2958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2958 CP001843.1 Genbank CDS 1217045 1217839 . + 0 ID=cds1090;Parent=gene1144;Dbxref=NCBI_GP:AEF86000.1;Name=AEF86000.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=4Fe-4S ferredoxin%2C iron-sulfur binding protein;protein_id=AEF86000.1;transl_table=11 CP001843.1 Genbank gene 1218049 1218891 . + . ID=gene1145;Name=TREPR_2957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2957 CP001843.1 Genbank CDS 1218049 1218891 . + 0 ID=cds1091;Parent=gene1145;Dbxref=NCBI_GP:AEF86932.1;Name=AEF86932.1;Note=identified by match to protein family HMM PF03123;gbkey=CDS;product=transcriptional antiterminator%2C BglG;protein_id=AEF86932.1;transl_table=11 CP001843.1 Genbank gene 1218888 1219772 . + . ID=gene1146;Name=TREPR_2956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2956 CP001843.1 Genbank CDS 1218888 1219772 . + 0 ID=cds1092;Parent=gene1146;Dbxref=NCBI_GP:AEF85828.1;Name=AEF85828.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF08282;gbkey=CDS;product=YcsE;protein_id=AEF85828.1;transl_table=11 CP001843.1 Genbank gene 1219843 1220697 . + . ID=gene1147;Name=TREPR_2955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2955 CP001843.1 Genbank CDS 1219843 1220697 . + 0 ID=cds1093;Parent=gene1147;Dbxref=NCBI_GP:AEF83616.1;Name=AEF83616.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;product=phosphoglycerate mutase family protein;protein_id=AEF83616.1;transl_table=11 CP001843.1 Genbank gene 1220773 1222725 . + . ID=gene1148;Name=TREPR_2954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2954 CP001843.1 Genbank CDS 1220773 1222725 . + 0 ID=cds1094;Parent=gene1148;Dbxref=NCBI_GP:AEF86532.1;Name=AEF86532.1;Note=identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00830;gbkey=CDS;product=PTS system beta-glucoside-specific EIIBCA component;protein_id=AEF86532.1;transl_table=11 CP001843.1 Genbank gene 1222740 1224215 . + . ID=gene1149;Name=TREPR_2953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2953 CP001843.1 Genbank CDS 1222740 1224215 . + 0 ID=cds1095;Parent=gene1149;Dbxref=NCBI_GP:AEF86846.1;Name=AEF86846.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=putative 5'-Nucleotidase domain protein;protein_id=AEF86846.1;transl_table=11 CP001843.1 Genbank gene 1224228 1225658 . + . ID=gene1150;Name=TREPR_2952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2952 CP001843.1 Genbank CDS 1224228 1225658 . + 0 ID=cds1096;Parent=gene1150;Dbxref=NCBI_GP:AEF84550.1;Name=AEF84550.1;Note=identified by match to protein family HMM PF00232;gbkey=CDS;product=beta-glucosidase (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) (Amygdalase);protein_id=AEF84550.1;transl_table=11 CP001843.1 Genbank gene 1225655 1225912 . + . ID=gene1151;Name=TREPR_2951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2951 CP001843.1 Genbank CDS 1225655 1225912 . + 0 ID=cds1097;Parent=gene1151;Dbxref=NCBI_GP:AEF84312.1;Name=AEF84312.1;Note=identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003;gbkey=CDS;product=phosphocarrier protein HPr;protein_id=AEF84312.1;transl_table=11 CP001843.1 Genbank gene 1225921 1227543 . + . ID=gene1152;Name=ptsP_3;gbkey=Gene;gene=ptsP_3;gene_biotype=protein_coding;locus_tag=TREPR_2950 CP001843.1 Genbank CDS 1225921 1227543 . + 0 ID=cds1098;Parent=gene1152;Dbxref=NCBI_GP:AEF86689.1;Name=AEF86689.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417;gbkey=CDS;gene=ptsP_3;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=AEF86689.1;transl_table=11 CP001843.1 Genbank gene 1227571 1227643 . - . ID=gene1153;Name=TREPR_3941;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3941 CP001843.1 Genbank tRNA 1227571 1227643 . - . ID=rna21;Parent=gene1153;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank exon 1227571 1227643 . - . ID=id26;Parent=rna21;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank gene 1227678 1229864 . - . ID=gene1154;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=TREPR_2948 CP001843.1 Genbank CDS 1227678 1229864 . - 0 ID=cds1099;Parent=gene1154;Dbxref=NCBI_GP:AEF85879.1;Name=AEF85879.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525;gbkey=CDS;gene=cadA;product=cadmium-exporting ATPase;protein_id=AEF85879.1;transl_table=11 CP001843.1 Genbank gene 1229867 1230238 . - . ID=gene1155;Name=TREPR_2947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2947 CP001843.1 Genbank CDS 1229867 1230238 . - 0 ID=cds1100;Parent=gene1155;Dbxref=NCBI_GP:AEF84629.1;Name=AEF84629.1;Note=identified by match to protein family HMM PF01022;gbkey=CDS;product=cadmium efflux system accessory protein;protein_id=AEF84629.1;transl_table=11 CP001843.1 Genbank gene 1230413 1232161 . - . ID=gene1156;Name=TREPR_2946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2946 CP001843.1 Genbank CDS 1230413 1232161 . - 0 ID=cds1101;Parent=gene1156;Dbxref=NCBI_GP:AEF86398.1;Name=AEF86398.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916%3B match to protein family HMM PF01740;gbkey=CDS;product=sulfate permease;protein_id=AEF86398.1;transl_table=11 CP001843.1 Genbank gene 1232258 1234057 . + . ID=gene1157;Name=TREPR_2945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2945 CP001843.1 Genbank CDS 1232258 1234057 . + 0 ID=cds1102;Parent=gene1157;Dbxref=NCBI_GP:AEF86235.1;Name=AEF86235.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851;gbkey=CDS;product=DNA or RNA helicase of superfamily II;protein_id=AEF86235.1;transl_table=11 CP001843.1 Genbank gene 1234054 1236183 . + . ID=gene1158;Name=TREPR_2944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2944 CP001843.1 Genbank CDS 1234054 1236183 . + 0 ID=cds1103;Parent=gene1158;Dbxref=NCBI_GP:AEF85857.1;Name=AEF85857.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85857.1;transl_table=11 CP001843.1 Genbank gene 1236229 1237008 . + . ID=gene1159;Name=TREPR_2943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2943 CP001843.1 Genbank CDS 1236229 1237008 . + 0 ID=cds1104;Parent=gene1159;Dbxref=NCBI_GP:AEF84658.1;Name=AEF84658.1;Note=identified by match to protein family HMM PF01936;gbkey=CDS;product=conserved domain protein;protein_id=AEF84658.1;transl_table=11 CP001843.1 Genbank gene 1237122 1239356 . + . ID=gene1160;Name=TREPR_2941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2941 CP001843.1 Genbank CDS 1237122 1239356 . + 0 ID=cds1105;Parent=gene1160;Dbxref=NCBI_GP:AEF86615.1;Name=AEF86615.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=AEF86615.1;transl_table=11 CP001843.1 Genbank gene 1239494 1241134 . - . ID=gene1161;Name=TREPR_2940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2940 CP001843.1 Genbank CDS 1239494 1241134 . - 0 ID=cds1106;Parent=gene1161;Dbxref=NCBI_GP:AEF86242.1;Name=AEF86242.1;Note=identified by match to protein family HMM PF00753%3B match to protein family HMM PF02230;gbkey=CDS;product=phospholipase/carboxylesterase family protein;protein_id=AEF86242.1;transl_table=11 CP001843.1 Genbank gene 1241339 1242079 . + . ID=gene1162;Name=TREPR_2938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2938 CP001843.1 Genbank CDS 1241339 1242079 . + 0 ID=cds1107;Parent=gene1162;Dbxref=NCBI_GP:AEF85001.1;Name=AEF85001.1;Note=identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85001.1;transl_table=11 CP001843.1 Genbank gene 1242066 1242746 . + . ID=gene1163;Name=TREPR_2937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2937 CP001843.1 Genbank CDS 1242066 1242746 . + 0 ID=cds1108;Parent=gene1163;Dbxref=NCBI_GP:AEF84040.1;Name=AEF84040.1;Note=identified by match to protein family HMM PF02075%3B match to protein family HMM TIGR00228;gbkey=CDS;product=crossover junction endodeoxyribonuclease RuvC (Hollidayjunction nuclease ruvC) (Holliday junction resolvase ruvC);protein_id=AEF84040.1;transl_table=11 CP001843.1 Genbank gene 1242819 1243292 . + . ID=gene1164;Name=TREPR_2936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2936 CP001843.1 Genbank CDS 1242819 1243292 . + 0 ID=cds1109;Parent=gene1164;Dbxref=NCBI_GP:AEF86223.1;Name=AEF86223.1;Note=identified by match to protein family HMM PF01584;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=AEF86223.1;transl_table=11 CP001843.1 Genbank gene 1243426 1244535 . + . ID=gene1165;Name=TREPR_2935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2935 CP001843.1 Genbank CDS 1243426 1244535 . + 0 ID=cds1110;Parent=gene1165;Dbxref=NCBI_GP:AEF84111.1;Name=AEF84111.1;Note=identified by match to protein family HMM PF01041;gbkey=CDS;product=aminotransferase%2C DegT/DnrJ/EryC1/StrS family;protein_id=AEF84111.1;transl_table=11 CP001843.1 Genbank gene 1244559 1245452 . + . ID=gene1166;Name=TREPR_2934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2934 CP001843.1 Genbank CDS 1244559 1245452 . + 0 ID=cds1111;Parent=gene1166;Dbxref=NCBI_GP:AEF84996.1;Name=AEF84996.1;Note=identified by match to protein family HMM PF01513;gbkey=CDS;product=putative inorganic polyphosphate/ATP-NAD kinase;protein_id=AEF84996.1;transl_table=11 CP001843.1 Genbank gene 1245445 1247265 . + . ID=gene1167;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=TREPR_2933 CP001843.1 Genbank CDS 1245445 1247265 . + 0 ID=cds1112;Parent=gene1167;Dbxref=NCBI_GP:AEF85556.1;Name=AEF85556.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634;gbkey=CDS;gene=recN;product=DNA repair protein RecN;protein_id=AEF85556.1;transl_table=11 CP001843.1 Genbank gene 1247278 1248129 . + . ID=gene1168;Name=TREPR_2932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2932 CP001843.1 Genbank CDS 1247278 1248129 . + 0 ID=cds1113;Parent=gene1168;Dbxref=NCBI_GP:AEF86508.1;Name=AEF86508.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86508.1;transl_table=11 CP001843.1 Genbank gene 1248095 1249918 . + . ID=gene1169;Name=TREPR_2931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2931 CP001843.1 Genbank CDS 1248095 1249918 . + 0 ID=cds1114;Parent=gene1169;Dbxref=NCBI_GP:AEF83608.1;Name=AEF83608.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=ABC-type multidrug/protein/lipid transport system%2C ATPase component;protein_id=AEF83608.1;transl_table=11 CP001843.1 Genbank gene 1249911 1252067 . + . ID=gene1170;Name=TREPR_2930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2930 CP001843.1 Genbank CDS 1249911 1252067 . + 0 ID=cds1115;Parent=gene1170;Dbxref=NCBI_GP:AEF84548.1;Name=AEF84548.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=ABC-type multidrug/protein/lipid transport system%2C ATPase component;protein_id=AEF84548.1;transl_table=11 CP001843.1 Genbank gene 1252113 1252400 . - . ID=gene1171;Name=TREPR_2929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2929 CP001843.1 Genbank CDS 1252113 1252400 . - 0 ID=cds1116;Parent=gene1171;Dbxref=NCBI_GP:AEF85058.1;Name=AEF85058.1;Note=identified by match to protein family HMM PF03992;gbkey=CDS;product=antibiotic biosynthesis monooxygenase domain protein;protein_id=AEF85058.1;transl_table=11 CP001843.1 Genbank gene 1252588 1254489 . + . ID=gene1172;Name=TREPR_2928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2928 CP001843.1 Genbank CDS 1252588 1254489 . + 0 ID=cds1117;Parent=gene1172;Dbxref=NCBI_GP:AEF85817.1;Name=AEF85817.1;Note=identified by match to protein family HMM PF00015;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=AEF85817.1;transl_table=11 CP001843.1 Genbank gene 1254555 1257371 . - . ID=gene1173;Name=TREPR_2927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2927 CP001843.1 Genbank CDS 1254555 1257371 . - 0 ID=cds1118;Parent=gene1173;Dbxref=NCBI_GP:AEF86947.1;Name=AEF86947.1;Note=identified by match to protein family HMM PF00023;gbkey=CDS;product=putative ankyrin;protein_id=AEF86947.1;transl_table=11 CP001843.1 Genbank gene 1257438 1258904 . - . ID=gene1174;Name=TREPR_2926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2926 CP001843.1 Genbank CDS 1257438 1258904 . - 0 ID=cds1119;Parent=gene1174;Dbxref=NCBI_GP:AEF83778.1;Name=AEF83778.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF04471%3B match to protein family HMM PF07719%3B match to protein family HMM PF07720;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF83778.1;transl_table=11 CP001843.1 Genbank gene 1259063 1259989 . + . ID=gene1175;Name=TREPR_2925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2925 CP001843.1 Genbank CDS 1259063 1259989 . + 0 ID=cds1120;Parent=gene1175;Dbxref=NCBI_GP:AEF83986.1;Name=AEF83986.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83986.1;transl_table=11 CP001843.1 Genbank gene 1260212 1262860 . - . ID=gene1176;Name=TREPR_2924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2924 CP001843.1 Genbank CDS 1260212 1262860 . - 0 ID=cds1121;Parent=gene1176;Dbxref=NCBI_GP:AEF84951.1;Name=AEF84951.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84951.1;transl_table=11 CP001843.1 Genbank gene 1263020 1263169 . - . ID=gene1177;Name=TREPR_2923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2923 CP001843.1 Genbank CDS 1263020 1263169 . - 0 ID=cds1122;Parent=gene1177;Dbxref=NCBI_GP:AEF85519.1;Name=AEF85519.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85519.1;transl_table=11 CP001843.1 Genbank gene 1263257 1264312 . + . ID=gene1178;Name=TREPR_2921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2921 CP001843.1 Genbank CDS 1263257 1264312 . + 0 ID=cds1123;Parent=gene1178;Dbxref=NCBI_GP:AEF83633.1;Name=AEF83633.1;Note=identified by match to protein family HMM PF01476;gbkey=CDS;product=putative LysM domain protein;protein_id=AEF83633.1;transl_table=11 CP001843.1 Genbank gene 1264449 1266638 . + . ID=gene1179;Name=TREPR_2920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2920 CP001843.1 Genbank CDS 1264449 1266638 . + 0 ID=cds1124;Parent=gene1179;Dbxref=NCBI_GP:AEF84504.1;Name=AEF84504.1;Note=identified by match to protein family HMM PF01464%3B match to protein family HMM PF07719;gbkey=CDS;product=lytic transglycosylase%2C catalytic;protein_id=AEF84504.1;transl_table=11 CP001843.1 Genbank gene 1266702 1268999 . + . ID=gene1180;Name=TREPR_2919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2919 CP001843.1 Genbank CDS 1266702 1268999 . + 0 ID=cds1125;Parent=gene1180;Dbxref=NCBI_GP:AEF86918.1;Name=AEF86918.1;Note=identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397;gbkey=CDS;product=ftsk/spoiiie family protein;protein_id=AEF86918.1;transl_table=11 CP001843.1 Genbank gene 1269204 1270328 . - . ID=gene1181;Name=TREPR_2917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2917 CP001843.1 Genbank CDS 1269204 1270328 . - 0 ID=cds1126;Parent=gene1181;Dbxref=NCBI_GP:AEF84882.1;Name=AEF84882.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84882.1;transl_table=11 CP001843.1 Genbank gene 1270712 1273642 . + . ID=gene1182;Name=TREPR_2916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2916 CP001843.1 Genbank CDS 1270712 1273642 . + 0 ID=cds1127;Parent=gene1182;Dbxref=NCBI_GP:AEF85454.1;Name=AEF85454.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=PAS domain protein;protein_id=AEF85454.1;transl_table=11 CP001843.1 Genbank pseudogene 1273692 1273829 . - . ID=gene1183;Name=TREPR_2915;Note=aldo/keto reductase%3B this region contains one or more premature stops and/or frameshifts;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2915;pseudo=true CP001843.1 Genbank pseudogene 1273826 1273963 . - . ID=gene1184;Name=TREPR_2914;Note=aldo/keto reductase%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2914;pseudo=true CP001843.1 Genbank gene 1274121 1274939 . - . ID=gene1185;Name=TREPR_2913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2913 CP001843.1 Genbank CDS 1274121 1274939 . - 0 ID=cds1128;Parent=gene1185;Dbxref=NCBI_GP:AEF84322.1;Name=AEF84322.1;gbkey=CDS;product=putative PE protein;protein_id=AEF84322.1;transl_table=11 CP001843.1 Genbank gene 1274940 1275449 . - . ID=gene1186;Name=TREPR_2912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2912 CP001843.1 Genbank CDS 1274940 1275449 . - 0 ID=cds1129;Parent=gene1186;Dbxref=NCBI_GP:AEF85027.1;Name=AEF85027.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=phosphinothricin N-acetyltransferase (PPT N-acetyltransferase) (Phosphinothricin-resistance protein);protein_id=AEF85027.1;transl_table=11 CP001843.1 Genbank gene 1275949 1277013 . + . ID=gene1187;Name=TREPR_2911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2911 CP001843.1 Genbank CDS 1275949 1277013 . + 0 ID=cds1130;Parent=gene1187;Dbxref=NCBI_GP:AEF85885.1;Name=AEF85885.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85885.1;transl_table=11 CP001843.1 Genbank gene 1277113 1277934 . + . ID=gene1188;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=TREPR_2910 CP001843.1 Genbank CDS 1277113 1277934 . + 0 ID=cds1131;Parent=gene1188;Dbxref=NCBI_GP:AEF86590.1;Name=AEF86590.1;Note=identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR01256;gbkey=CDS;gene=modA;product=molybdate ABC transporter%2C periplasmic molybdate-binding protein;protein_id=AEF86590.1;transl_table=11 CP001843.1 Genbank pseudogene 1277931 1278632 . + . ID=gene1189;Name=modB;Note=molybdate ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02141;gbkey=Gene;gene=modB;gene_biotype=pseudogene;locus_tag=TREPR_2909;pseudo=true CP001843.1 Genbank pseudogene 1278629 1279705 . + . ID=gene1190;Name=TREPR_2908;Note=molybdenum import ATP-binding protein ModC%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2908;pseudo=true CP001843.1 Genbank gene 1279737 1279949 . + . ID=gene1191;Name=TREPR_2906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2906 CP001843.1 Genbank CDS 1279737 1279949 . + 0 ID=cds1132;Parent=gene1191;Dbxref=NCBI_GP:AEF85634.1;Name=AEF85634.1;Note=identified by match to protein family HMM PF03459%3B match to protein family HMM TIGR00638;gbkey=CDS;product=conserved domain protein;protein_id=AEF85634.1;transl_table=11 CP001843.1 Genbank gene 1279946 1280503 . - . ID=gene1192;Name=TREPR_2907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2907 CP001843.1 Genbank CDS 1279946 1280503 . - 0 ID=cds1133;Parent=gene1192;Dbxref=NCBI_GP:AEF85154.1;Name=AEF85154.1;Note=identified by match to protein family HMM PF03551;gbkey=CDS;product=PadR;protein_id=AEF85154.1;transl_table=11 CP001843.1 Genbank gene 1280623 1281249 . + . ID=gene1193;Name=TREPR_2905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2905 CP001843.1 Genbank CDS 1280623 1281249 . + 0 ID=cds1134;Parent=gene1193;Dbxref=NCBI_GP:AEF87043.1;Name=AEF87043.1;Note=identified by match to protein family HMM PF02310;gbkey=CDS;product=methionine synthase;protein_id=AEF87043.1;transl_table=11 CP001843.1 Genbank gene 1281601 1282521 . + . ID=gene1194;Name=TREPR_2904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2904 CP001843.1 Genbank CDS 1281601 1282521 . + 0 ID=cds1135;Parent=gene1194;Dbxref=NCBI_GP:AEF85548.1;Name=AEF85548.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85548.1;transl_table=11 CP001843.1 Genbank gene 1282588 1285014 . - . ID=gene1195;Name=TREPR_2903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2903 CP001843.1 Genbank CDS 1282588 1285014 . - 0 ID=cds1136;Parent=gene1195;Dbxref=NCBI_GP:AEF85803.1;Name=AEF85803.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518%3B match to protein family HMM PF02743;gbkey=CDS;product=MmoS;protein_id=AEF85803.1;transl_table=11 CP001843.1 Genbank gene 1285251 1285487 . - . ID=gene1196;Name=TREPR_2902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2902 CP001843.1 Genbank CDS 1285251 1285487 . - 0 ID=cds1137;Parent=gene1196;Dbxref=NCBI_GP:AEF83937.1;Name=AEF83937.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83937.1;transl_table=11 CP001843.1 Genbank gene 1285513 1285755 . - . ID=gene1197;Name=TREPR_2901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2901 CP001843.1 Genbank CDS 1285513 1285755 . - 0 ID=cds1138;Parent=gene1197;Dbxref=NCBI_GP:AEF86412.1;Name=AEF86412.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86412.1;transl_table=11 CP001843.1 Genbank gene 1285918 1286541 . + . ID=gene1198;Name=TREPR_2900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2900 CP001843.1 Genbank CDS 1285918 1286541 . + 0 ID=cds1139;Parent=gene1198;Dbxref=NCBI_GP:AEF84032.1;Name=AEF84032.1;Note=identified by match to protein family HMM PF02310;gbkey=CDS;product=methionine synthase;protein_id=AEF84032.1;transl_table=11 CP001843.1 Genbank gene 1286538 1287659 . + . ID=gene1199;Name=TREPR_2899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2899 CP001843.1 Genbank CDS 1286538 1287659 . + 0 ID=cds1140;Parent=gene1199;Dbxref=NCBI_GP:AEF87044.1;Name=AEF87044.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF87044.1;transl_table=11 CP001843.1 Genbank gene 1287679 1288482 . + . ID=gene1200;Name=TREPR_2898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2898 CP001843.1 Genbank CDS 1287679 1288482 . + 0 ID=cds1141;Parent=gene1200;Dbxref=NCBI_GP:AEF84729.1;Name=AEF84729.1;Note=identified by match to protein family HMM PF00809;gbkey=CDS;product=methionine synthase;protein_id=AEF84729.1;transl_table=11 CP001843.1 Genbank gene 1288572 1289750 . + . ID=gene1201;Name=TREPR_2897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2897 CP001843.1 Genbank CDS 1288572 1289750 . + 0 ID=cds1142;Parent=gene1201;Dbxref=NCBI_GP:AEF83775.1;Name=AEF83775.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=transporter%2C major facilitator family;protein_id=AEF83775.1;transl_table=11 CP001843.1 Genbank gene 1289840 1290850 . + . ID=gene1202;Name=TREPR_2896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2896 CP001843.1 Genbank CDS 1289840 1290850 . + 0 ID=cds1143;Parent=gene1202;Dbxref=NCBI_GP:AEF83532.1;Name=AEF83532.1;Note=identified by match to protein family HMM PF02492;gbkey=CDS;product=cobalamin synthesis protein CobW;protein_id=AEF83532.1;transl_table=11 CP001843.1 Genbank gene 1290863 1291525 . + . ID=gene1203;Name=TREPR_2895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2895 CP001843.1 Genbank CDS 1290863 1291525 . + 0 ID=cds1144;Parent=gene1203;Dbxref=NCBI_GP:AEF84033.1;Name=AEF84033.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84033.1;transl_table=11 CP001843.1 Genbank gene 1291594 1292154 . + . ID=gene1204;Name=TREPR_2894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2894 CP001843.1 Genbank CDS 1291594 1292154 . + 0 ID=cds1145;Parent=gene1204;Dbxref=NCBI_GP:AEF83680.1;Name=AEF83680.1;Note=identified by match to protein family HMM PF05685;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83680.1;transl_table=11 CP001843.1 Genbank gene 1292159 1293784 . - . ID=gene1205;Name=TREPR_2893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2893 CP001843.1 Genbank CDS 1292159 1293784 . - 0 ID=cds1146;Parent=gene1205;Dbxref=NCBI_GP:AEF84607.1;Name=AEF84607.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728;gbkey=CDS;product=transcriptional regulator%2C NifA subfamily%2C Fis Family;protein_id=AEF84607.1;transl_table=11 CP001843.1 Genbank gene 1293760 1293888 . - . ID=gene1206;Name=TREPR_2892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2892 CP001843.1 Genbank CDS 1293760 1293888 . - 0 ID=cds1147;Parent=gene1206;Dbxref=NCBI_GP:AEF85551.1;Name=AEF85551.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85551.1;transl_table=11 CP001843.1 Genbank gene 1294089 1294931 . + . ID=gene1207;Name=nifH_2;gbkey=Gene;gene=nifH_2;gene_biotype=protein_coding;locus_tag=TREPR_2890 CP001843.1 Genbank CDS 1294089 1294931 . + 0 ID=cds1148;Parent=gene1207;Dbxref=NCBI_GP:AEF83597.1;Name=AEF83597.1;Note=identified by match to protein family HMM PF00142%3B match to protein family HMM TIGR01287;gbkey=CDS;gene=nifH_2;product=nitrogenase iron protein;protein_id=AEF83597.1;transl_table=11 CP001843.1 Genbank gene 1295027 1295389 . + . ID=gene1208;Name=TREPR_2889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2889 CP001843.1 Genbank CDS 1295027 1295389 . + 0 ID=cds1149;Parent=gene1208;Dbxref=NCBI_GP:AEF84636.1;Name=AEF84636.1;Note=identified by match to protein family HMM PF00543%3B overlaps another CDS with the same product name;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=AEF84636.1;transl_table=11 CP001843.1 Genbank gene 1295386 1295763 . + . ID=gene1209;Name=TREPR_2888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2888 CP001843.1 Genbank CDS 1295386 1295763 . + 0 ID=cds1150;Parent=gene1209;Dbxref=NCBI_GP:AEF86020.1;Name=AEF86020.1;Note=identified by match to protein family HMM PF00543%3B overlaps another CDS with the same product name;gbkey=CDS;product=nitrogen regulatory protein P-II;protein_id=AEF86020.1;transl_table=11 CP001843.1 Genbank gene 1295773 1297413 . + . ID=gene1210;Name=nifD;gbkey=Gene;gene=nifD;gene_biotype=protein_coding;locus_tag=TREPR_2887 CP001843.1 Genbank CDS 1295773 1297413 . + 0 ID=cds1151;Parent=gene1210;Dbxref=NCBI_GP:AEF86202.1;Name=AEF86202.1;Note=identified by match to protein family HMM PF00148%3B match to protein family HMM TIGR01282%3B match to protein family HMM TIGR01862;gbkey=CDS;gene=nifD;product=nitrogenase molybdenum-iron protein alpha chain;protein_id=AEF86202.1;transl_table=11 CP001843.1 Genbank gene 1297426 1298802 . + . ID=gene1211;Name=nifK;gbkey=Gene;gene=nifK;gene_biotype=protein_coding;locus_tag=TREPR_2886 CP001843.1 Genbank CDS 1297426 1298802 . + 0 ID=cds1152;Parent=gene1211;Dbxref=NCBI_GP:AEF84074.1;Name=AEF84074.1;Note=identified by match to protein family HMM PF00148%3B match to protein family HMM TIGR01286;gbkey=CDS;gene=nifK;product=nitrogenase molybdenum-iron protein beta chain;protein_id=AEF84074.1;transl_table=11 CP001843.1 Genbank gene 1298818 1300368 . + . ID=gene1212;Name=nifE;gbkey=Gene;gene=nifE;gene_biotype=protein_coding;locus_tag=TREPR_2885 CP001843.1 Genbank CDS 1298818 1300368 . + 0 ID=cds1153;Parent=gene1212;Dbxref=NCBI_GP:AEF83846.1;Name=AEF83846.1;Note=identified by match to protein family HMM PF00148%3B match to protein family HMM TIGR01283;gbkey=CDS;gene=nifE;product=nitrogenase MoFe cofactor biosynthesis protein NifE;protein_id=AEF83846.1;transl_table=11 CP001843.1 Genbank gene 1300365 1301753 . + . ID=gene1213;Name=TREPR_2884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2884 CP001843.1 Genbank CDS 1300365 1301753 . + 0 ID=cds1154;Parent=gene1213;Dbxref=NCBI_GP:AEF83801.1;Name=AEF83801.1;Note=identified by match to protein family HMM PF00148;gbkey=CDS;product=nitrogenase molybdenum-iron protein beta chain (Nitrogenase component I) (Dinitrogenase);protein_id=AEF83801.1;transl_table=11 CP001843.1 Genbank gene 1301750 1303036 . + . ID=gene1214;Name=nifB;gbkey=Gene;gene=nifB;gene_biotype=protein_coding;locus_tag=TREPR_2883 CP001843.1 Genbank CDS 1301750 1303036 . + 0 ID=cds1155;Parent=gene1214;Dbxref=NCBI_GP:AEF84549.1;Name=AEF84549.1;Note=identified by match to protein family HMM PF02579%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR01290;gbkey=CDS;gene=nifB;product=nitrogenase cofactor biosynthesis protein NifB;protein_id=AEF84549.1;transl_table=11 CP001843.1 Genbank gene 1303103 1303411 . + . ID=gene1215;Name=TREPR_2882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2882 CP001843.1 Genbank CDS 1303103 1303411 . + 0 ID=cds1156;Parent=gene1215;Dbxref=NCBI_GP:AEF86129.1;Name=AEF86129.1;gbkey=CDS;product=ferredoxin%2C 2Fe-2S (2FeCpFd);protein_id=AEF86129.1;transl_table=11 CP001843.1 Genbank gene 1303498 1304226 . + . ID=gene1216;Name=TREPR_2881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2881 CP001843.1 Genbank CDS 1303498 1304226 . + 0 ID=cds1157;Parent=gene1216;Dbxref=NCBI_GP:AEF86909.1;Name=AEF86909.1;Note=identified by match to protein family HMM PF00117;gbkey=CDS;product=glutamine amidotransferase class-I;protein_id=AEF86909.1;transl_table=11 CP001843.1 Genbank gene 1304272 1305936 . - . ID=gene1217;Name=TREPR_2880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2880 CP001843.1 Genbank CDS 1304272 1305936 . - 0 ID=cds1158;Parent=gene1217;Dbxref=NCBI_GP:AEF85124.1;Name=AEF85124.1;Note=identified by match to protein family HMM PF00682;gbkey=CDS;product=2-isopropylmalate synthase (Alpha-isopropylmalatesynthase) (Alpha-IPM synthetase);protein_id=AEF85124.1;transl_table=11 CP001843.1 Genbank gene 1306471 1307508 . + . ID=gene1218;Name=TREPR_2878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2878 CP001843.1 Genbank CDS 1306471 1307508 . + 0 ID=cds1159;Parent=gene1218;Dbxref=NCBI_GP:AEF86622.1;Name=AEF86622.1;Note=identified by match to protein family HMM PF00994;gbkey=CDS;product=molybdopterin binding domain protein;protein_id=AEF86622.1;transl_table=11 CP001843.1 Genbank gene 1307569 1308336 . + . ID=gene1219;Name=TREPR_2877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2877 CP001843.1 Genbank CDS 1307569 1308336 . + 0 ID=cds1160;Parent=gene1219;Dbxref=NCBI_GP:AEF86591.1;Name=AEF86591.1;Note=identified by match to protein family HMM PF01738%3B match to protein family HMM PF08840;gbkey=CDS;product=carboxymethylenebutenolidase;protein_id=AEF86591.1;transl_table=11 CP001843.1 Genbank gene 1308342 1309607 . + . ID=gene1220;Name=TREPR_2876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2876 CP001843.1 Genbank CDS 1308342 1309607 . + 0 ID=cds1161;Parent=gene1220;Dbxref=NCBI_GP:AEF85702.1;Name=AEF85702.1;Note=identified by match to protein family HMM PF02810%3B match to protein family HMM PF04055;gbkey=CDS;product=chondroitin sulfate/heparin utilization regulation protein;protein_id=AEF85702.1;transl_table=11 CP001843.1 Genbank gene 1309939 1311318 . + . ID=gene1221;Name=TREPR_2875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2875 CP001843.1 Genbank CDS 1309939 1311318 . + 0 ID=cds1162;Parent=gene1221;Dbxref=NCBI_GP:AEF85892.1;Name=AEF85892.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85892.1;transl_table=11 CP001843.1 Genbank gene 1311409 1311490 . - . ID=gene1222;Name=TREPR_3940;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3940 CP001843.1 Genbank tRNA 1311409 1311490 . - . ID=rna22;Parent=gene1222;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank exon 1311409 1311490 . - . ID=id27;Parent=rna22;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank gene 1311699 1312040 . + . ID=gene1223;Name=TREPR_2872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2872 CP001843.1 Genbank CDS 1311699 1312040 . + 0 ID=cds1163;Parent=gene1223;Dbxref=NCBI_GP:AEF86842.1;Name=AEF86842.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86842.1;transl_table=11 CP001843.1 Genbank gene 1312024 1312362 . + . ID=gene1224;Name=TREPR_2871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2871 CP001843.1 Genbank CDS 1312024 1312362 . + 0 ID=cds1164;Parent=gene1224;Dbxref=NCBI_GP:AEF84297.1;Name=AEF84297.1;gbkey=CDS;product=helix-turn-helix domain protein;protein_id=AEF84297.1;transl_table=11 CP001843.1 Genbank gene 1312668 1312838 . + . ID=gene1225;Name=TREPR_2870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2870 CP001843.1 Genbank CDS 1312668 1312838 . + 0 ID=cds1165;Parent=gene1225;Dbxref=NCBI_GP:AEF85345.1;Name=AEF85345.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85345.1;transl_table=11 CP001843.1 Genbank gene 1312852 1313283 . + . ID=gene1226;Name=TREPR_2869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2869 CP001843.1 Genbank CDS 1312852 1313283 . + 0 ID=cds1166;Parent=gene1226;Dbxref=NCBI_GP:AEF85452.1;Name=AEF85452.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85452.1;transl_table=11 CP001843.1 Genbank gene 1313276 1313479 . + . ID=gene1227;Name=TREPR_2868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2868 CP001843.1 Genbank CDS 1313276 1313479 . + 0 ID=cds1167;Parent=gene1227;Dbxref=NCBI_GP:AEF86448.1;Name=AEF86448.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86448.1;transl_table=11 CP001843.1 Genbank gene 1313617 1313698 . - . ID=gene1228;Name=TREPR_3939;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3939 CP001843.1 Genbank tRNA 1313617 1313698 . - . ID=rna23;Parent=gene1228;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank exon 1313617 1313698 . - . ID=id28;Parent=rna23;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank gene 1313841 1314458 . + . ID=gene1229;Name=TREPR_2866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2866 CP001843.1 Genbank CDS 1313841 1314458 . + 0 ID=cds1168;Parent=gene1229;Dbxref=NCBI_GP:AEF83912.1;Name=AEF83912.1;gbkey=CDS;product=22.5 kDa protein;protein_id=AEF83912.1;transl_table=11 CP001843.1 Genbank gene 1314521 1315912 . + . ID=gene1230;Name=TREPR_2865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2865 CP001843.1 Genbank CDS 1314521 1315912 . + 0 ID=cds1169;Parent=gene1230;Dbxref=NCBI_GP:AEF84739.1;Name=AEF84739.1;Note=identified by match to protein family HMM PF02120;gbkey=CDS;product=putative treponemal aqueous protein;protein_id=AEF84739.1;transl_table=11 CP001843.1 Genbank gene 1315937 1316374 . + . ID=gene1231;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=TREPR_2864 CP001843.1 Genbank CDS 1315937 1316374 . + 0 ID=cds1170;Parent=gene1231;Dbxref=NCBI_GP:AEF85306.1;Name=AEF85306.1;Note=identified by match to protein family HMM PF03963;gbkey=CDS;gene=flgD;product=flagellar hook capping protein;protein_id=AEF85306.1;transl_table=11 CP001843.1 Genbank gene 1316388 1317818 . + . ID=gene1232;Name=TREPR_2863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2863 CP001843.1 Genbank CDS 1316388 1317818 . + 0 ID=cds1171;Parent=gene1232;Dbxref=NCBI_GP:AEF86198.1;Name=AEF86198.1;Note=identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM PF07559%3B match to protein family HMM TIGR03506;gbkey=CDS;product=flagellar hook protein FlgE;protein_id=AEF86198.1;transl_table=11 CP001843.1 Genbank gene 1317950 1318147 . + . ID=gene1233;Name=TREPR_2862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2862 CP001843.1 Genbank CDS 1317950 1318147 . + 0 ID=cds1172;Parent=gene1233;Dbxref=NCBI_GP:AEF85839.1;Name=AEF85839.1;Note=identified by match to protein family HMM PF06289;gbkey=CDS;product=conserved domain protein;protein_id=AEF85839.1;transl_table=11 CP001843.1 Genbank gene 1318153 1318935 . + . ID=gene1234;Name=TREPR_2861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2861 CP001843.1 Genbank CDS 1318153 1318935 . + 0 ID=cds1173;Parent=gene1234;Dbxref=NCBI_GP:AEF84615.1;Name=AEF84615.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;product=chemotaxis protein PomA;protein_id=AEF84615.1;transl_table=11 CP001843.1 Genbank gene 1319014 1319745 . + . ID=gene1235;Name=TREPR_2860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2860 CP001843.1 Genbank CDS 1319014 1319745 . + 0 ID=cds1174;Parent=gene1235;Dbxref=NCBI_GP:AEF84385.1;Name=AEF84385.1;Note=identified by match to protein family HMM PF00691;gbkey=CDS;product=chemotaxis protein MotB;protein_id=AEF84385.1;transl_table=11 CP001843.1 Genbank gene 1319714 1319827 . + . ID=gene1236;Name=TREPR_2859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2859 CP001843.1 Genbank CDS 1319714 1319827 . + 0 ID=cds1175;Parent=gene1236;Dbxref=NCBI_GP:AEF86714.1;Name=AEF86714.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86714.1;transl_table=11 CP001843.1 Genbank gene 1319831 1320394 . + . ID=gene1237;Name=fliL_1;gbkey=Gene;gene=fliL_1;gene_biotype=protein_coding;locus_tag=TREPR_2858 CP001843.1 Genbank CDS 1319831 1320394 . + 0 ID=cds1176;Parent=gene1237;Dbxref=NCBI_GP:AEF83756.1;Name=AEF83756.1;Note=identified by match to protein family HMM PF03748;gbkey=CDS;gene=fliL_1;product=flagellar basal body-associated protein FliL;protein_id=AEF83756.1;transl_table=11 CP001843.1 Genbank gene 1320429 1320551 . + . ID=gene1238;Name=TREPR_2857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2857 CP001843.1 Genbank CDS 1320429 1320551 . + 0 ID=cds1177;Parent=gene1238;Dbxref=NCBI_GP:AEF86270.1;Name=AEF86270.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86270.1;transl_table=11 CP001843.1 Genbank gene 1320548 1321579 . + . ID=gene1239;Name=fliM_2;gbkey=Gene;gene=fliM_2;gene_biotype=protein_coding;locus_tag=TREPR_2856 CP001843.1 Genbank CDS 1320548 1321579 . + 0 ID=cds1178;Parent=gene1239;Dbxref=NCBI_GP:AEF85911.1;Name=AEF85911.1;Note=identified by match to protein family HMM PF01052%3B match to protein family HMM PF02154%3B match to protein family HMM TIGR01397;gbkey=CDS;gene=fliM_2;product=flagellar motor switch protein FliM;protein_id=AEF85911.1;transl_table=11 CP001843.1 Genbank gene 1321576 1322661 . + . ID=gene1240;Name=TREPR_2855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2855 CP001843.1 Genbank CDS 1321576 1322661 . + 0 ID=cds1179;Parent=gene1240;Dbxref=NCBI_GP:AEF84769.1;Name=AEF84769.1;Note=identified by match to protein family HMM PF01052%3B match to protein family HMM TIGR02480;gbkey=CDS;product=flagellar motor switch protein FliY;protein_id=AEF84769.1;transl_table=11 CP001843.1 Genbank gene 1322717 1323382 . + . ID=gene1241;Name=TREPR_2854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2854 CP001843.1 Genbank CDS 1322717 1323382 . + 0 ID=cds1180;Parent=gene1241;Dbxref=NCBI_GP:AEF84216.1;Name=AEF84216.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84216.1;transl_table=11 CP001843.1 Genbank gene 1323379 1324206 . + . ID=gene1242;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=TREPR_2853 CP001843.1 Genbank CDS 1323379 1324206 . + 0 ID=cds1181;Parent=gene1242;Dbxref=NCBI_GP:AEF86561.1;Name=AEF86561.1;Note=identified by match to protein family HMM PF00813%3B match to protein family HMM TIGR01103;gbkey=CDS;gene=fliP;product=flagellar biosynthetic protein FliP;protein_id=AEF86561.1;transl_table=11 CP001843.1 Genbank gene 1324220 1324489 . + . ID=gene1243;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=TREPR_2852 CP001843.1 Genbank CDS 1324220 1324489 . + 0 ID=cds1182;Parent=gene1243;Dbxref=NCBI_GP:AEF86722.1;Name=AEF86722.1;Note=identified by match to protein family HMM PF01313%3B match to protein family HMM TIGR01402;gbkey=CDS;gene=fliQ;product=flagellar biosynthetic protein FliQ;protein_id=AEF86722.1;transl_table=11 CP001843.1 Genbank gene 1324592 1325407 . + . ID=gene1244;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=TREPR_2851 CP001843.1 Genbank CDS 1324592 1325407 . + 0 ID=cds1183;Parent=gene1244;Dbxref=NCBI_GP:AEF83825.1;Name=AEF83825.1;Note=identified by match to protein family HMM PF01311%3B match to protein family HMM TIGR01400;gbkey=CDS;gene=fliR;product=flagellar biosynthetic protein FliR;protein_id=AEF83825.1;transl_table=11 CP001843.1 Genbank gene 1325404 1326546 . + . ID=gene1245;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=TREPR_2850 CP001843.1 Genbank CDS 1325404 1326546 . + 0 ID=cds1184;Parent=gene1245;Dbxref=NCBI_GP:AEF85259.1;Name=AEF85259.1;Note=identified by match to protein family HMM PF01312%3B match to protein family HMM TIGR00328;gbkey=CDS;gene=flhB;product=flagellar biosynthetic protein FlhB;protein_id=AEF85259.1;transl_table=11 CP001843.1 Genbank gene 1326586 1328685 . + . ID=gene1246;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=TREPR_2849 CP001843.1 Genbank CDS 1326586 1328685 . + 0 ID=cds1185;Parent=gene1246;Dbxref=NCBI_GP:AEF85823.1;Name=AEF85823.1;Note=identified by match to protein family HMM PF00771%3B match to protein family HMM TIGR01398;gbkey=CDS;gene=flhA;product=flagellar biosynthesis protein FlhA;protein_id=AEF85823.1;transl_table=11 CP001843.1 Genbank gene 1328714 1330054 . + . ID=gene1247;Name=TREPR_2848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2848 CP001843.1 Genbank CDS 1328714 1330054 . + 0 ID=cds1186;Parent=gene1247;Dbxref=NCBI_GP:AEF84130.1;Name=AEF84130.1;Note=identified by match to protein family HMM PF00448%3B match to protein family HMM TIGR03499;gbkey=CDS;product=flagellar biosynthesis protein FlhF (Flagella-associated GTP-bindingprotein);protein_id=AEF84130.1;transl_table=11 CP001843.1 Genbank gene 1330054 1330941 . + . ID=gene1248;Name=TREPR_2847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2847 CP001843.1 Genbank CDS 1330054 1330941 . + 0 ID=cds1187;Parent=gene1248;Dbxref=NCBI_GP:AEF85013.1;Name=AEF85013.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;product=flagellar synthesis regulator FleN;protein_id=AEF85013.1;transl_table=11 CP001843.1 Genbank gene 1330952 1331638 . + . ID=gene1249;Name=TREPR_2846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2846 CP001843.1 Genbank CDS 1330952 1331638 . + 0 ID=cds1188;Parent=gene1249;Dbxref=NCBI_GP:AEF86173.1;Name=AEF86173.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86173.1;transl_table=11 CP001843.1 Genbank gene 1331648 1332460 . + . ID=gene1250;Name=TREPR_2845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2845 CP001843.1 Genbank CDS 1331648 1332460 . + 0 ID=cds1189;Parent=gene1250;Dbxref=NCBI_GP:AEF86979.1;Name=AEF86979.1;Note=identified by match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02479%3B match to protein family HMM TIGR02937;gbkey=CDS;product=RNA polymerase sigma-D factor;protein_id=AEF86979.1;transl_table=11 CP001843.1 Genbank gene 1332489 1334459 . + . ID=gene1251;Name=TREPR_2844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2844 CP001843.1 Genbank CDS 1332489 1334459 . + 0 ID=cds1190;Parent=gene1251;Dbxref=NCBI_GP:AEF83835.1;Name=AEF83835.1;Note=identified by match to protein family HMM PF03961;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83835.1;transl_table=11 CP001843.1 Genbank gene 1334440 1334778 . + . ID=gene1252;Name=TREPR_2843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2843 CP001843.1 Genbank CDS 1334440 1334778 . + 0 ID=cds1191;Parent=gene1252;Dbxref=NCBI_GP:AEF84200.1;Name=AEF84200.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84200.1;transl_table=11 CP001843.1 Genbank gene 1334785 1335558 . + . ID=gene1253;Name=TREPR_2842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2842 CP001843.1 Genbank CDS 1334785 1335558 . + 0 ID=cds1192;Parent=gene1253;Dbxref=NCBI_GP:AEF85334.1;Name=AEF85334.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85334.1;transl_table=11 CP001843.1 Genbank gene 1335644 1335716 . + . ID=gene1254;Name=TREPR_3938;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3938 CP001843.1 Genbank tRNA 1335644 1335716 . + . ID=rna24;Parent=gene1254;gbkey=tRNA;product=tRNA-Phe CP001843.1 Genbank exon 1335644 1335716 . + . ID=id29;Parent=rna24;gbkey=tRNA;product=tRNA-Phe CP001843.1 Genbank gene 1335889 1337439 . - . ID=gene1255;Name=TREPR_2839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2839 CP001843.1 Genbank CDS 1335889 1337439 . - 0 ID=cds1193;Parent=gene1255;Dbxref=NCBI_GP:AEF83792.1;Name=AEF83792.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=UshA protein;protein_id=AEF83792.1;transl_table=11 CP001843.1 Genbank gene 1337622 1338059 . - . ID=gene1256;Name=TREPR_2838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2838 CP001843.1 Genbank CDS 1337622 1338059 . - 0 ID=cds1194;Parent=gene1256;Dbxref=NCBI_GP:AEF84770.1;Name=AEF84770.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=MutT/NUDIX family protein;protein_id=AEF84770.1;transl_table=11 CP001843.1 Genbank gene 1338258 1339172 . + . ID=gene1257;Name=TREPR_2836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2836 CP001843.1 Genbank CDS 1338258 1339172 . + 0 ID=cds1195;Parent=gene1257;Dbxref=NCBI_GP:AEF87007.1;Name=AEF87007.1;gbkey=CDS;product=cell surface protein;protein_id=AEF87007.1;transl_table=11 CP001843.1 Genbank gene 1339192 1340091 . + . ID=gene1258;Name=TREPR_2835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2835 CP001843.1 Genbank CDS 1339192 1340091 . + 0 ID=cds1196;Parent=gene1258;Dbxref=NCBI_GP:AEF84271.1;Name=AEF84271.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84271.1;transl_table=11 CP001843.1 Genbank gene 1340248 1340436 . - . ID=gene1259;Name=TREPR_2834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2834 CP001843.1 Genbank CDS 1340248 1340436 . - 0 ID=cds1197;Parent=gene1259;Dbxref=NCBI_GP:AEF83650.1;Name=AEF83650.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83650.1;transl_table=11 CP001843.1 Genbank gene 1340776 1341087 . + . ID=gene1260;Name=TREPR_2832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2832 CP001843.1 Genbank CDS 1340776 1341087 . + 0 ID=cds1198;Parent=gene1260;Dbxref=NCBI_GP:AEF84344.1;Name=AEF84344.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84344.1;transl_table=11 CP001843.1 Genbank gene 1341138 1341689 . + . ID=gene1261;Name=TREPR_2831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2831 CP001843.1 Genbank CDS 1341138 1341689 . + 0 ID=cds1199;Parent=gene1261;Dbxref=NCBI_GP:AEF85097.1;Name=AEF85097.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85097.1;transl_table=11 CP001843.1 Genbank gene 1342437 1342733 . - . ID=gene1262;Name=TREPR_2830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2830 CP001843.1 Genbank CDS 1342437 1342733 . - 0 ID=cds1200;Parent=gene1262;Dbxref=NCBI_GP:AEF84368.1;Name=AEF84368.1;gbkey=CDS;product=PIN domain protein;protein_id=AEF84368.1;transl_table=11 CP001843.1 Genbank gene 1343242 1344570 . - . ID=gene1263;Name=TREPR_2828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2828 CP001843.1 Genbank CDS 1343242 1344570 . - 0 ID=cds1201;Parent=gene1263;Dbxref=NCBI_GP:AEF84020.1;Name=AEF84020.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84020.1;transl_table=11 CP001843.1 Genbank gene 1344567 1345361 . - . ID=gene1264;Name=TREPR_2827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2827 CP001843.1 Genbank CDS 1344567 1345361 . - 0 ID=cds1202;Parent=gene1264;Dbxref=NCBI_GP:AEF85691.1;Name=AEF85691.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85691.1;transl_table=11 CP001843.1 Genbank gene 1345369 1348011 . - . ID=gene1265;Name=TREPR_2826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2826 CP001843.1 Genbank CDS 1345369 1348011 . - 0 ID=cds1203;Parent=gene1265;Dbxref=NCBI_GP:AEF84682.1;Name=AEF84682.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF84682.1;transl_table=11 CP001843.1 Genbank gene 1348189 1348743 . + . ID=gene1266;Name=TREPR_2825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2825 CP001843.1 Genbank CDS 1348189 1348743 . + 0 ID=cds1204;Parent=gene1266;Dbxref=NCBI_GP:AEF83577.1;Name=AEF83577.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=transcriptional regulator;protein_id=AEF83577.1;transl_table=11 CP001843.1 Genbank gene 1348882 1350000 . + . ID=gene1267;Name=TREPR_2824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2824 CP001843.1 Genbank CDS 1348882 1350000 . + 0 ID=cds1205;Parent=gene1267;Dbxref=NCBI_GP:AEF86973.1;Name=AEF86973.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86973.1;transl_table=11 CP001843.1 Genbank gene 1350037 1351401 . + . ID=gene1268;Name=TREPR_2823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2823 CP001843.1 Genbank CDS 1350037 1351401 . + 0 ID=cds1206;Parent=gene1268;Dbxref=NCBI_GP:AEF86510.1;Name=AEF86510.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF86510.1;transl_table=11 CP001843.1 Genbank gene 1351508 1351918 . + . ID=gene1269;Name=TREPR_2822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2822 CP001843.1 Genbank CDS 1351508 1351918 . + 0 ID=cds1207;Parent=gene1269;Dbxref=NCBI_GP:AEF85814.1;Name=AEF85814.1;gbkey=CDS;product=putative positive regulator of sigma E%2C RseC/MucC;protein_id=AEF85814.1;transl_table=11 CP001843.1 Genbank gene 1351969 1352085 . + . ID=gene1270;Name=TREPR_2821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2821 CP001843.1 Genbank CDS 1351969 1352085 . + 0 ID=cds1208;Parent=gene1270;Dbxref=NCBI_GP:AEF85004.1;Name=AEF85004.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85004.1;transl_table=11 CP001843.1 Genbank gene 1352063 1352980 . + . ID=gene1271;Name=TREPR_2820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2820 CP001843.1 Genbank CDS 1352063 1352980 . + 0 ID=cds1209;Parent=gene1271;Dbxref=NCBI_GP:AEF84706.1;Name=AEF84706.1;Note=identified by match to protein family HMM PF00023;gbkey=CDS;product=ankyrin repeat protein;protein_id=AEF84706.1;transl_table=11 CP001843.1 Genbank gene 1352990 1353805 . + . ID=gene1272;Name=TREPR_2819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2819 CP001843.1 Genbank CDS 1352990 1353805 . + 0 ID=cds1210;Parent=gene1272;Dbxref=NCBI_GP:AEF83585.1;Name=AEF83585.1;Note=identified by match to protein family HMM PF02146;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=AEF83585.1;transl_table=11 CP001843.1 Genbank gene 1353823 1354731 . + . ID=gene1273;Name=TREPR_2818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2818 CP001843.1 Genbank CDS 1353823 1354731 . + 0 ID=cds1211;Parent=gene1273;Dbxref=NCBI_GP:AEF86606.1;Name=AEF86606.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86606.1;transl_table=11 CP001843.1 Genbank gene 1354742 1356244 . - . ID=gene1274;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=TREPR_2817 CP001843.1 Genbank CDS 1354742 1356244 . - 0 ID=cds1212;Parent=gene1274;Dbxref=NCBI_GP:AEF83610.1;Name=AEF83610.1;Note=identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464;gbkey=CDS;gene=gltX;product=glutamate--tRNA ligase;protein_id=AEF83610.1;transl_table=11 CP001843.1 Genbank gene 1356304 1357761 . + . ID=gene1275;Name=TREPR_2816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2816 CP001843.1 Genbank CDS 1356304 1357761 . + 0 ID=cds1213;Parent=gene1275;Dbxref=NCBI_GP:AEF86551.1;Name=AEF86551.1;Note=identified by match to protein family HMM PF02127;gbkey=CDS;product=probable M18 family aminopeptidase 1;protein_id=AEF86551.1;transl_table=11 CP001843.1 Genbank gene 1357803 1357988 . - . ID=gene1276;Name=TREPR_2815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2815 CP001843.1 Genbank CDS 1357803 1357988 . - 0 ID=cds1214;Parent=gene1276;Dbxref=NCBI_GP:AEF85995.1;Name=AEF85995.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85995.1;transl_table=11 CP001843.1 Genbank gene 1358048 1358809 . - . ID=gene1277;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=TREPR_2814 CP001843.1 Genbank CDS 1358048 1358809 . - 0 ID=cds1215;Parent=gene1277;Dbxref=NCBI_GP:AEF84563.1;Name=AEF84563.1;Note=identified by match to protein family HMM PF03588%3B match to protein family HMM TIGR00667;gbkey=CDS;gene=aat;product=leucyltransferase;protein_id=AEF84563.1;transl_table=11 CP001843.1 Genbank gene 1358874 1361420 . - . ID=gene1278;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=TREPR_2813 CP001843.1 Genbank CDS 1358874 1361420 . - 0 ID=cds1216;Parent=gene1278;Dbxref=NCBI_GP:AEF83995.1;Name=AEF83995.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR02639;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=AEF83995.1;transl_table=11 CP001843.1 Genbank gene 1361491 1361802 . - . ID=gene1279;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=TREPR_2812 CP001843.1 Genbank CDS 1361491 1361802 . - 0 ID=cds1217;Parent=gene1279;Dbxref=NCBI_GP:AEF84007.1;Name=AEF84007.1;Note=identified by match to protein family HMM PF02617;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adaptor protein ClpS;protein_id=AEF84007.1;transl_table=11 CP001843.1 Genbank gene 1361949 1362731 . + . ID=gene1280;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=TREPR_2811 CP001843.1 Genbank CDS 1361949 1362731 . + 0 ID=cds1218;Parent=gene1280;Dbxref=NCBI_GP:AEF86941.1;Name=AEF86941.1;Note=identified by match to protein family HMM PF03372%3B match to protein family HMM TIGR00195%3B match to protein family HMM TIGR00633;gbkey=CDS;gene=xth;product=exodeoxyribonuclease III;protein_id=AEF86941.1;transl_table=11 CP001843.1 Genbank gene 1362741 1363310 . + . ID=gene1281;Name=TREPR_2810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2810 CP001843.1 Genbank CDS 1362741 1363310 . + 0 ID=cds1219;Parent=gene1281;Dbxref=NCBI_GP:AEF85983.1;Name=AEF85983.1;Note=identified by match to protein family HMM PF01694;gbkey=CDS;product=rhomboid family protein;protein_id=AEF85983.1;transl_table=11 CP001843.1 Genbank gene 1363303 1363995 . + . ID=gene1282;Name=TREPR_2809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2809 CP001843.1 Genbank CDS 1363303 1363995 . + 0 ID=cds1220;Parent=gene1282;Dbxref=NCBI_GP:AEF83545.1;Name=AEF83545.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83545.1;transl_table=11 CP001843.1 Genbank gene 1363989 1364831 . + . ID=gene1283;Name=TREPR_2808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2808 CP001843.1 Genbank CDS 1363989 1364831 . + 0 ID=cds1221;Parent=gene1283;Dbxref=NCBI_GP:AEF87039.1;Name=AEF87039.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;product=Ser/Thr protein phosphatase family protein;protein_id=AEF87039.1;transl_table=11 CP001843.1 Genbank gene 1364904 1365518 . + . ID=gene1284;Name=TREPR_2807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2807 CP001843.1 Genbank CDS 1364904 1365518 . + 0 ID=cds1222;Parent=gene1284;Dbxref=NCBI_GP:AEF85661.1;Name=AEF85661.1;gbkey=CDS;product=phosphoribosyl transferase domain protein;protein_id=AEF85661.1;transl_table=11 CP001843.1 Genbank gene 1365528 1366139 . + . ID=gene1285;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=TREPR_2806 CP001843.1 Genbank CDS 1365528 1366139 . + 0 ID=cds1223;Parent=gene1285;Dbxref=NCBI_GP:AEF84585.1;Name=AEF84585.1;Note=identified by match to protein family HMM PF01351;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=AEF84585.1;transl_table=11 CP001843.1 Genbank gene 1366237 1366476 . + . ID=gene1286;Name=TREPR_2805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2805 CP001843.1 Genbank CDS 1366237 1366476 . + 0 ID=cds1224;Parent=gene1286;Dbxref=NCBI_GP:AEF83997.1;Name=AEF83997.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83997.1;transl_table=11 CP001843.1 Genbank gene 1367030 1367662 . - . ID=gene1287;Name=TREPR_2803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2803 CP001843.1 Genbank CDS 1367030 1367662 . - 0 ID=cds1225;Parent=gene1287;Dbxref=NCBI_GP:AEF86048.1;Name=AEF86048.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86048.1;transl_table=11 CP001843.1 Genbank gene 1367736 1367996 . - . ID=gene1288;Name=TREPR_2802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2802 CP001843.1 Genbank CDS 1367736 1367996 . - 0 ID=cds1226;Parent=gene1288;Dbxref=NCBI_GP:AEF85369.1;Name=AEF85369.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85369.1;transl_table=11 CP001843.1 Genbank gene 1368072 1369238 . + . ID=gene1289;Name=TREPR_2801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2801 CP001843.1 Genbank CDS 1368072 1369238 . + 0 ID=cds1227;Parent=gene1289;Dbxref=NCBI_GP:AEF85223.1;Name=AEF85223.1;Note=identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544;gbkey=CDS;product=putative galactokinase (Galactose kinase);protein_id=AEF85223.1;transl_table=11 CP001843.1 Genbank gene 1369235 1370017 . + . ID=gene1290;Name=TREPR_2800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2800 CP001843.1 Genbank CDS 1369235 1370017 . + 0 ID=cds1228;Parent=gene1290;Dbxref=NCBI_GP:AEF84276.1;Name=AEF84276.1;Note=identified by match to protein family HMM PF01975%3B match to protein family HMM TIGR00087;gbkey=CDS;product=5'-nucleotidase SurE (Nucleoside 5'-monophosphatephosphohydrolase);protein_id=AEF84276.1;transl_table=11 CP001843.1 Genbank gene 1370021 1370719 . + . ID=gene1291;Name=TREPR_2799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2799 CP001843.1 Genbank CDS 1370021 1370719 . + 0 ID=cds1229;Parent=gene1291;Dbxref=NCBI_GP:AEF85509.1;Name=AEF85509.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07720;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF85509.1;transl_table=11 CP001843.1 Genbank pseudogene 1370716 1372809 . + . ID=gene1292;Name=TREPR_2798;Note=tetratricopeptide repeat domain protein%3B this region contains one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF01436;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2798;pseudo=true CP001843.1 Genbank gene 1372883 1373158 . + . ID=gene1293;Name=TREPR_2797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2797 CP001843.1 Genbank CDS 1372883 1373158 . + 0 ID=cds1230;Parent=gene1293;Dbxref=NCBI_GP:AEF83759.1;Name=AEF83759.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83759.1;transl_table=11 CP001843.1 Genbank gene 1373155 1373445 . + . ID=gene1294;Name=TREPR_2796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2796 CP001843.1 Genbank CDS 1373155 1373445 . + 0 ID=cds1231;Parent=gene1294;Dbxref=NCBI_GP:AEF86811.1;Name=AEF86811.1;gbkey=CDS;product=CopG domain protein DNA-binding domain protein;protein_id=AEF86811.1;transl_table=11 CP001843.1 Genbank gene 1373529 1374710 . - . ID=gene1295;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=TREPR_2795 CP001843.1 Genbank CDS 1373529 1374710 . - 0 ID=cds1232;Parent=gene1295;Dbxref=NCBI_GP:AEF85795.1;Name=AEF85795.1;Note=identified by match to protein family HMM PF02568%3B match to protein family HMM PF02926%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00342;gbkey=CDS;gene=thiI;product=thiamine biosynthesis/tRNA modification protein ThiI;protein_id=AEF85795.1;transl_table=11 CP001843.1 Genbank gene 1374710 1375864 . - . ID=gene1296;Name=TREPR_2794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2794 CP001843.1 Genbank CDS 1374710 1375864 . - 0 ID=cds1233;Parent=gene1296;Dbxref=NCBI_GP:AEF85229.1;Name=AEF85229.1;Note=identified by match to protein family HMM PF00266;gbkey=CDS;product=cysteine desulfurase;protein_id=AEF85229.1;transl_table=11 CP001843.1 Genbank gene 1376031 1376321 . + . ID=gene1297;Name=TREPR_2793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2793 CP001843.1 Genbank CDS 1376031 1376321 . + 0 ID=cds1234;Parent=gene1297;Dbxref=NCBI_GP:AEF84280.1;Name=AEF84280.1;Note=identified by match to protein family HMM PF01022;gbkey=CDS;product=regulatory protein%2C ArsR;protein_id=AEF84280.1;transl_table=11 CP001843.1 Genbank gene 1376326 1377411 . - . ID=gene1298;Name=TREPR_2792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2792 CP001843.1 Genbank CDS 1376326 1377411 . - 0 ID=cds1235;Parent=gene1298;Dbxref=NCBI_GP:AEF86524.1;Name=AEF86524.1;Note=identified by match to protein family HMM PF00953;gbkey=CDS;product=putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase;protein_id=AEF86524.1;transl_table=11 CP001843.1 Genbank gene 1377597 1380140 . + . ID=gene1299;Name=TREPR_2791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2791 CP001843.1 Genbank CDS 1377597 1380140 . + 0 ID=cds1236;Parent=gene1299;Dbxref=NCBI_GP:AEF84522.1;Name=AEF84522.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM PF00742%3B match to protein family HMM PF01842%3B match to protein family HMM PF03447%3B match to protein family HMM TIGR00657;gbkey=CDS;product=bifunctional aspartokinase/homoserine dehydrogenase I;protein_id=AEF84522.1;transl_table=11 CP001843.1 Genbank gene 1380165 1380290 . - . ID=gene1300;Name=TREPR_2790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2790 CP001843.1 Genbank CDS 1380165 1380290 . - 0 ID=cds1237;Parent=gene1300;Dbxref=NCBI_GP:AEF85999.1;Name=AEF85999.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85999.1;transl_table=11 CP001843.1 Genbank gene 1380425 1380676 . + . ID=gene1301;Name=TREPR_2789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2789 CP001843.1 Genbank CDS 1380425 1380676 . + 0 ID=cds1238;Parent=gene1301;Dbxref=NCBI_GP:AEF86678.1;Name=AEF86678.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86678.1;transl_table=11 CP001843.1 Genbank gene 1380686 1380934 . + . ID=gene1302;Name=TREPR_2788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2788 CP001843.1 Genbank CDS 1380686 1380934 . + 0 ID=cds1239;Parent=gene1302;Dbxref=NCBI_GP:AEF84140.1;Name=AEF84140.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84140.1;transl_table=11 CP001843.1 Genbank gene 1381369 1384683 . + . ID=gene1303;Name=TREPR_2787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2787 CP001843.1 Genbank CDS 1381369 1384683 . + 0 ID=cds1240;Parent=gene1303;Dbxref=NCBI_GP:AEF84969.1;Name=AEF84969.1;Note=identified by match to protein family HMM PF00041;gbkey=CDS;product=fibronectin type III domain protein;protein_id=AEF84969.1;transl_table=11 CP001843.1 Genbank gene 1384698 1389701 . + . ID=gene1304;Name=TREPR_2786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2786 CP001843.1 Genbank CDS 1384698 1389701 . + 0 ID=cds1241;Parent=gene1304;Dbxref=NCBI_GP:AEF84790.1;Name=AEF84790.1;Note=identified by match to protein family HMM PF02415%3B match to protein family HMM TIGR01376;gbkey=CDS;product=putative extracellular nuclease;protein_id=AEF84790.1;transl_table=11 CP001843.1 Genbank gene 1389914 1393204 . + . ID=gene1305;Name=TREPR_2785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2785 CP001843.1 Genbank CDS 1389914 1393204 . + 0 ID=cds1242;Parent=gene1305;Dbxref=NCBI_GP:AEF85347.1;Name=AEF85347.1;Note=identified by match to protein family HMM PF00041;gbkey=CDS;product=fibronectin type III domain protein;protein_id=AEF85347.1;transl_table=11 CP001843.1 Genbank gene 1393220 1396744 . + . ID=gene1306;Name=TREPR_2784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2784 CP001843.1 Genbank CDS 1393220 1396744 . + 0 ID=cds1243;Parent=gene1306;Dbxref=NCBI_GP:AEF86336.1;Name=AEF86336.1;Note=identified by match to protein family HMM TIGR01376;gbkey=CDS;product=probable extracellular nuclease;protein_id=AEF86336.1;transl_table=11 CP001843.1 Genbank gene 1396874 1397287 . + . ID=gene1307;Name=TREPR_2782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2782 CP001843.1 Genbank CDS 1396874 1397287 . + 0 ID=cds1244;Parent=gene1307;Dbxref=NCBI_GP:AEF84831.1;Name=AEF84831.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84831.1;transl_table=11 CP001843.1 Genbank pseudogene 1397340 1399262 . + . ID=gene1308;Name=TREPR_2781;Note=tetratricopeptide repeat domain protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by match to protein family HMM PF07719;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2781;pseudo=true CP001843.1 Genbank gene 1399267 1401744 . + . ID=gene1309;Name=TREPR_2780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2780 CP001843.1 Genbank CDS 1399267 1401744 . + 0 ID=cds1245;Parent=gene1309;Dbxref=NCBI_GP:AEF86478.1;Name=AEF86478.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07721;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF86478.1;transl_table=11 CP001843.1 Genbank gene 1401778 1402638 . - . ID=gene1310;Name=TREPR_2779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2779 CP001843.1 Genbank CDS 1401778 1402638 . - 0 ID=cds1246;Parent=gene1310;Dbxref=NCBI_GP:AEF85765.1;Name=AEF85765.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=4Fe-4S ferredoxin%2C iron-sulfur binding domain protein;protein_id=AEF85765.1;transl_table=11 CP001843.1 Genbank gene 1402807 1403109 . + . ID=gene1311;Name=TREPR_2778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2778 CP001843.1 Genbank CDS 1402807 1403109 . + 0 ID=cds1247;Parent=gene1311;Dbxref=NCBI_GP:AEF83730.1;Name=AEF83730.1;Note=identified by match to protein family HMM PF04365;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83730.1;transl_table=11 CP001843.1 Genbank gene 1403063 1403377 . + . ID=gene1312;Name=TREPR_2777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2777 CP001843.1 Genbank CDS 1403063 1403377 . + 0 ID=cds1248;Parent=gene1312;Dbxref=NCBI_GP:AEF86467.1;Name=AEF86467.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86467.1;transl_table=11 CP001843.1 Genbank gene 1403451 1404542 . - . ID=gene1313;Name=TREPR_2776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2776 CP001843.1 Genbank CDS 1403451 1404542 . - 0 ID=cds1249;Parent=gene1313;Dbxref=NCBI_GP:AEF86952.1;Name=AEF86952.1;Note=identified by match to protein family HMM PF04015;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86952.1;transl_table=11 CP001843.1 Genbank gene 1404662 1407202 . + . ID=gene1314;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=TREPR_2775 CP001843.1 Genbank CDS 1404662 1407202 . + 0 ID=cds1250;Parent=gene1314;Dbxref=NCBI_GP:AEF84447.1;Name=AEF84447.1;Note=identified by match to protein family HMM PF00343%3B match to protein family HMM TIGR02094;gbkey=CDS;gene=malP;product=maltodextrin phosphorylase;protein_id=AEF84447.1;transl_table=11 CP001843.1 Genbank pseudogene 1407341 1407556 . + . ID=gene1315;Name=TREPR_2774;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2774;pseudo=true CP001843.1 Genbank gene 1407621 1408364 . + . ID=gene1316;Name=TREPR_2773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2773 CP001843.1 Genbank CDS 1407621 1408364 . + 0 ID=cds1251;Parent=gene1316;Dbxref=NCBI_GP:AEF84151.1;Name=AEF84151.1;Note=identified by match to protein family HMM PF03358;gbkey=CDS;product=flavin reductase;protein_id=AEF84151.1;transl_table=11 CP001843.1 Genbank gene 1408431 1408856 . - . ID=gene1317;Name=TREPR_2772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2772 CP001843.1 Genbank CDS 1408431 1408856 . - 0 ID=cds1252;Parent=gene1317;Dbxref=NCBI_GP:AEF86281.1;Name=AEF86281.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=PilT protein domain protein;protein_id=AEF86281.1;transl_table=11 CP001843.1 Genbank gene 1408828 1409061 . - . ID=gene1318;Name=TREPR_2771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2771 CP001843.1 Genbank CDS 1408828 1409061 . - 0 ID=cds1253;Parent=gene1318;Dbxref=NCBI_GP:AEF85964.1;Name=AEF85964.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85964.1;transl_table=11 CP001843.1 Genbank gene 1409092 1410474 . - . ID=gene1319;Name=TREPR_2770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2770 CP001843.1 Genbank CDS 1409092 1410474 . - 0 ID=cds1254;Parent=gene1319;Dbxref=NCBI_GP:AEF84811.1;Name=AEF84811.1;Note=identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00792;gbkey=CDS;product=sugar transporter;protein_id=AEF84811.1;transl_table=11 CP001843.1 Genbank gene 1410632 1411342 . + . ID=gene1320;Name=TREPR_2769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2769 CP001843.1 Genbank CDS 1410632 1411342 . + 0 ID=cds1255;Parent=gene1320;Dbxref=NCBI_GP:AEF83574.1;Name=AEF83574.1;Note=identified by match to protein family HMM PF00254%3B match to protein family HMM PF01346;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase%2C FKBP-type%2C 22 kDa subunit;protein_id=AEF83574.1;transl_table=11 CP001843.1 Genbank gene 1411834 1412166 . + . ID=gene1321;Name=TREPR_2768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2768 CP001843.1 Genbank CDS 1411834 1412166 . + 0 ID=cds1256;Parent=gene1321;Dbxref=NCBI_GP:AEF85917.1;Name=AEF85917.1;Note=identified by match to protein family HMM PF01258;gbkey=CDS;product=C4 zinc finger domain protein%2C DksA/TraR family;protein_id=AEF85917.1;transl_table=11 CP001843.1 Genbank gene 1412191 1413069 . - . ID=gene1322;Name=TREPR_2767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2767 CP001843.1 Genbank CDS 1412191 1413069 . - 0 ID=cds1257;Parent=gene1322;Dbxref=NCBI_GP:AEF85593.1;Name=AEF85593.1;Note=identified by match to protein family HMM PF02811%3B match to protein family HMM TIGR01856;gbkey=CDS;product=histidinol phosphate phosphatase%2C HisJ;protein_id=AEF85593.1;transl_table=11 CP001843.1 Genbank gene 1413078 1414445 . - . ID=gene1323;Name=TREPR_2766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2766 CP001843.1 Genbank CDS 1413078 1414445 . - 0 ID=cds1258;Parent=gene1323;Dbxref=NCBI_GP:AEF84382.1;Name=AEF84382.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=putative response regulator;protein_id=AEF84382.1;transl_table=11 CP001843.1 Genbank gene 1415124 1415693 . + . ID=gene1324;Name=TREPR_2765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2765 CP001843.1 Genbank CDS 1415124 1415693 . + 0 ID=cds1259;Parent=gene1324;Dbxref=NCBI_GP:AEF86959.1;Name=AEF86959.1;Note=identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01383;gbkey=CDS;product=protein ThiJ;protein_id=AEF86959.1;transl_table=11 CP001843.1 Genbank gene 1415733 1416134 . - . ID=gene1325;Name=TREPR_2764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2764 CP001843.1 Genbank CDS 1415733 1416134 . - 0 ID=cds1260;Parent=gene1325;Dbxref=NCBI_GP:AEF86039.1;Name=AEF86039.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86039.1;transl_table=11 CP001843.1 Genbank gene 1416131 1416967 . - . ID=gene1326;Name=TREPR_2763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2763 CP001843.1 Genbank CDS 1416131 1416967 . - 0 ID=cds1261;Parent=gene1326;Dbxref=NCBI_GP:AEF86546.1;Name=AEF86546.1;gbkey=CDS;product=metallophosphoesterase;protein_id=AEF86546.1;transl_table=11 CP001843.1 Genbank gene 1416982 1417533 . - . ID=gene1327;Name=TREPR_2762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2762 CP001843.1 Genbank CDS 1416982 1417533 . - 0 ID=cds1262;Parent=gene1327;Dbxref=NCBI_GP:AEF84538.1;Name=AEF84538.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF84538.1;transl_table=11 CP001843.1 Genbank gene 1417743 1419650 . + . ID=gene1328;Name=TREPR_2761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2761 CP001843.1 Genbank CDS 1417743 1419650 . + 0 ID=cds1263;Parent=gene1328;Dbxref=NCBI_GP:AEF85119.1;Name=AEF85119.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85119.1;transl_table=11 CP001843.1 Genbank gene 1419743 1421194 . + . ID=gene1329;Name=TREPR_2760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2760 CP001843.1 Genbank CDS 1419743 1421194 . + 0 ID=cds1264;Parent=gene1329;Dbxref=NCBI_GP:AEF86526.1;Name=AEF86526.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86526.1;transl_table=11 CP001843.1 Genbank gene 1421315 1421581 . - . ID=gene1330;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=TREPR_2759 CP001843.1 Genbank CDS 1421315 1421581 . - 0 ID=cds1265;Parent=gene1330;Dbxref=NCBI_GP:AEF85682.1;Name=AEF85682.1;Note=identified by match to protein family HMM PF00166;gbkey=CDS;gene=groS;product=chaperonin GroS;protein_id=AEF85682.1;transl_table=11 CP001843.1 Genbank gene 1421751 1422710 . - . ID=gene1331;Name=TREPR_2757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2757 CP001843.1 Genbank CDS 1421751 1422710 . - 0 ID=cds1266;Parent=gene1331;Dbxref=NCBI_GP:AEF83793.1;Name=AEF83793.1;Note=identified by match to protein family HMM PF03330%3B match to protein family HMM PF05036%3B match to protein family HMM TIGR00413;gbkey=CDS;product=lipoprotein%2C RlpA family;protein_id=AEF83793.1;transl_table=11 CP001843.1 Genbank gene 1422777 1423619 . - . ID=gene1332;Name=TREPR_2756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2756 CP001843.1 Genbank CDS 1422777 1423619 . - 0 ID=cds1267;Parent=gene1332;Dbxref=NCBI_GP:AEF86953.1;Name=AEF86953.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;product=hydrolase;protein_id=AEF86953.1;transl_table=11 CP001843.1 Genbank gene 1423742 1424500 . + . ID=gene1333;Name=TREPR_2755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2755 CP001843.1 Genbank CDS 1423742 1424500 . + 0 ID=cds1268;Parent=gene1333;Dbxref=NCBI_GP:AEF85748.1;Name=AEF85748.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;product=sporulation initiation inhibitor protein Soj;protein_id=AEF85748.1;transl_table=11 CP001843.1 Genbank gene 1424490 1425485 . + . ID=gene1334;Name=TREPR_2754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2754 CP001843.1 Genbank CDS 1424490 1425485 . + 0 ID=cds1269;Parent=gene1334;Dbxref=NCBI_GP:AEF85621.1;Name=AEF85621.1;Note=identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180;gbkey=CDS;product=chromosome-partitioning protein ParB;protein_id=AEF85621.1;transl_table=11 CP001843.1 Genbank gene 1425526 1425864 . - . ID=gene1335;Name=TREPR_2753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2753 CP001843.1 Genbank CDS 1425526 1425864 . - 0 ID=cds1270;Parent=gene1335;Dbxref=NCBI_GP:AEF85532.1;Name=AEF85532.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=transcriptional regulator;protein_id=AEF85532.1;transl_table=11 CP001843.1 Genbank gene 1426040 1426207 . + . ID=gene1336;Name=TREPR_2752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2752 CP001843.1 Genbank CDS 1426040 1426207 . + 0 ID=cds1271;Parent=gene1336;Dbxref=NCBI_GP:AEF86580.1;Name=AEF86580.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86580.1;transl_table=11 CP001843.1 Genbank gene 1426270 1427121 . - . ID=gene1337;Name=TREPR_2751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2751 CP001843.1 Genbank CDS 1426270 1427121 . - 0 ID=cds1272;Parent=gene1337;Dbxref=NCBI_GP:AEF84055.1;Name=AEF84055.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=methyl parathion hydrolase;protein_id=AEF84055.1;transl_table=11 CP001843.1 Genbank gene 1427134 1428786 . - . ID=gene1338;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=TREPR_2750 CP001843.1 Genbank CDS 1427134 1428786 . - 0 ID=cds1273;Parent=gene1338;Dbxref=NCBI_GP:AEF84958.1;Name=AEF84958.1;Note=identified by match to protein family HMM PF01406%3B match to protein family HMM PF01921%3B match to protein family HMM TIGR00467;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=AEF84958.1;transl_table=11 CP001843.1 Genbank gene 1428795 1429973 . - . ID=gene1339;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=TREPR_2749 CP001843.1 Genbank CDS 1428795 1429973 . - 0 ID=cds1274;Parent=gene1339;Dbxref=NCBI_GP:AEF86046.1;Name=AEF86046.1;Note=identified by match to protein family HMM PF00334;gbkey=CDS;gene=ndk;product=nucleoside diphosphate kinase family;protein_id=AEF86046.1;transl_table=11 CP001843.1 Genbank gene 1429972 1430109 . + . ID=gene1340;Name=TREPR_2748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2748 CP001843.1 Genbank CDS 1429972 1430109 . + 0 ID=cds1275;Parent=gene1340;Dbxref=NCBI_GP:AEF87016.1;Name=AEF87016.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF87016.1;transl_table=11 CP001843.1 Genbank gene 1430112 1434536 . + . ID=gene1341;Name=TREPR_2747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2747 CP001843.1 Genbank CDS 1430112 1434536 . + 0 ID=cds1276;Parent=gene1341;Dbxref=NCBI_GP:AEF86263.1;Name=AEF86263.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;product=CoA enzyme activase;protein_id=AEF86263.1;transl_table=11 CP001843.1 Genbank gene 1434538 1435113 . + . ID=gene1342;Name=TREPR_2746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2746 CP001843.1 Genbank CDS 1434538 1435113 . + 0 ID=cds1277;Parent=gene1342;Dbxref=NCBI_GP:AEF85566.1;Name=AEF85566.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85566.1;transl_table=11 CP001843.1 Genbank gene 1435110 1435568 . + . ID=gene1343;Name=TREPR_2745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2745 CP001843.1 Genbank CDS 1435110 1435568 . + 0 ID=cds1278;Parent=gene1343;Dbxref=NCBI_GP:AEF86193.1;Name=AEF86193.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=HD family hydrolase%2C diverged;protein_id=AEF86193.1;transl_table=11 CP001843.1 Genbank gene 1435667 1437127 . - . ID=gene1344;Name=TREPR_2744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2744 CP001843.1 Genbank CDS 1435667 1437127 . - 0 ID=cds1279;Parent=gene1344;Dbxref=NCBI_GP:AEF84068.1;Name=AEF84068.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF84068.1;transl_table=11 CP001843.1 Genbank gene 1437275 1437919 . + . ID=gene1345;Name=TREPR_2743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2743 CP001843.1 Genbank CDS 1437275 1437919 . + 0 ID=cds1280;Parent=gene1345;Dbxref=NCBI_GP:AEF85446.1;Name=AEF85446.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85446.1;transl_table=11 CP001843.1 Genbank gene 1437960 1438553 . + . ID=gene1346;Name=TREPR_2742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2742 CP001843.1 Genbank CDS 1437960 1438553 . + 0 ID=cds1281;Parent=gene1346;Dbxref=NCBI_GP:AEF85408.1;Name=AEF85408.1;Note=identified by match to protein family HMM PF02659;gbkey=CDS;product=membrane protein;protein_id=AEF85408.1;transl_table=11 CP001843.1 Genbank gene 1438777 1438859 . + . ID=gene1347;Name=TREPR_3937;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3937 CP001843.1 Genbank tRNA 1438777 1438859 . + . ID=rna25;Parent=gene1347;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank exon 1438777 1438859 . + . ID=id30;Parent=rna25;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank gene 1439028 1440257 . + . ID=gene1348;Name=TREPR_2740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2740 CP001843.1 Genbank CDS 1439028 1440257 . + 0 ID=cds1282;Parent=gene1348;Dbxref=NCBI_GP:AEF84630.1;Name=AEF84630.1;gbkey=CDS;product=ATPase;protein_id=AEF84630.1;transl_table=11 CP001843.1 Genbank gene 1440645 1443866 . - . ID=gene1349;Name=TREPR_2739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2739 CP001843.1 Genbank CDS 1440645 1443866 . - 0 ID=cds1283;Parent=gene1349;Dbxref=NCBI_GP:AEF83944.1;Name=AEF83944.1;Note=identified by match to protein family HMM PF04313%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00348;gbkey=CDS;product=putatIve type i restriction enzyme hindviip r protein;protein_id=AEF83944.1;transl_table=11 CP001843.1 Genbank gene 1444014 1445165 . + . ID=gene1350;Name=TREPR_2738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2738 CP001843.1 Genbank CDS 1444014 1445165 . + 0 ID=cds1284;Parent=gene1350;Dbxref=NCBI_GP:AEF86713.1;Name=AEF86713.1;Note=identified by match to protein family HMM PF06114;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86713.1;transl_table=11 CP001843.1 Genbank gene 1445162 1445638 . + . ID=gene1351;Name=TREPR_2737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2737 CP001843.1 Genbank CDS 1445162 1445638 . + 0 ID=cds1285;Parent=gene1351;Dbxref=NCBI_GP:AEF84976.1;Name=AEF84976.1;gbkey=CDS;product=PIN domain protein;protein_id=AEF84976.1;transl_table=11 CP001843.1 Genbank gene 1445653 1446870 . - . ID=gene1352;Name=TREPR_2736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2736 CP001843.1 Genbank CDS 1445653 1446870 . - 0 ID=cds1286;Parent=gene1352;Dbxref=NCBI_GP:AEF84230.1;Name=AEF84230.1;Note=identified by match to protein family HMM PF01420;gbkey=CDS;product=restriction modification system DNA specificity domain protein;protein_id=AEF84230.1;transl_table=11 CP001843.1 Genbank gene 1446867 1447295 . - . ID=gene1353;Name=TREPR_2735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2735 CP001843.1 Genbank CDS 1446867 1447295 . - 0 ID=cds1287;Parent=gene1353;Dbxref=NCBI_GP:AEF83727.1;Name=AEF83727.1;gbkey=CDS;product=divergent AAA ATPase;protein_id=AEF83727.1;transl_table=11 CP001843.1 Genbank gene 1447292 1448992 . - . ID=gene1354;Name=TREPR_2734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2734 CP001843.1 Genbank CDS 1447292 1448992 . - 0 ID=cds1288;Parent=gene1354;Dbxref=NCBI_GP:AEF86250.1;Name=AEF86250.1;Note=identified by match to protein family HMM PF02384;gbkey=CDS;product=putatIve type i restriction enzyme hindviip m protein (m.hindviip);protein_id=AEF86250.1;transl_table=11 CP001843.1 Genbank gene 1449014 1451110 . - . ID=gene1355;Name=TREPR_2733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2733 CP001843.1 Genbank CDS 1449014 1451110 . - 0 ID=cds1289;Parent=gene1355;Dbxref=NCBI_GP:AEF86218.1;Name=AEF86218.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743;gbkey=CDS;product=putative methyl-accepting chemotaxis protein;protein_id=AEF86218.1;transl_table=11 CP001843.1 Genbank gene 1451251 1452597 . - . ID=gene1356;Name=TREPR_2732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2732 CP001843.1 Genbank CDS 1451251 1452597 . - 0 ID=cds1290;Parent=gene1356;Dbxref=NCBI_GP:AEF83868.1;Name=AEF83868.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83868.1;transl_table=11 CP001843.1 Genbank gene 1452788 1454146 . + . ID=gene1357;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=TREPR_2731 CP001843.1 Genbank CDS 1452788 1454146 . + 0 ID=cds1291;Parent=gene1357;Dbxref=NCBI_GP:AEF84245.1;Name=AEF84245.1;Note=identified by match to protein family HMM PF00309%3B match to protein family HMM PF04552%3B match to protein family HMM PF04963%3B match to protein family HMM TIGR02395;gbkey=CDS;gene=rpoN;product=RNA polymerase sigma-54 factor;protein_id=AEF84245.1;transl_table=11 CP001843.1 Genbank gene 1454173 1454514 . + . ID=gene1358;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=TREPR_2729 CP001843.1 Genbank CDS 1454173 1454514 . + 0 ID=cds1292;Parent=gene1358;Dbxref=NCBI_GP:AEF84433.1;Name=AEF84433.1;Note=identified by match to protein family HMM TIGR00741;gbkey=CDS;gene=raiA;product=ribosomal subunit interface protein;protein_id=AEF84433.1;transl_table=11 CP001843.1 Genbank gene 1454501 1455571 . - . ID=gene1359;Name=TREPR_2730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2730 CP001843.1 Genbank CDS 1454501 1455571 . - 0 ID=cds1293;Parent=gene1359;Dbxref=NCBI_GP:AEF86812.1;Name=AEF86812.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86812.1;transl_table=11 CP001843.1 Genbank gene 1455552 1456283 . - . ID=gene1360;Name=TREPR_2728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2728 CP001843.1 Genbank CDS 1455552 1456283 . - 0 ID=cds1294;Parent=gene1360;Dbxref=NCBI_GP:AEF84318.1;Name=AEF84318.1;Note=identified by match to protein family HMM PF02629%3B match to protein family HMM PF06971;gbkey=CDS;product=redox-sensing transcriptional repressor Rex;protein_id=AEF84318.1;transl_table=11 CP001843.1 Genbank gene 1456332 1457141 . - . ID=gene1361;Name=TREPR_2727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2727 CP001843.1 Genbank CDS 1456332 1457141 . - 0 ID=cds1295;Parent=gene1361;Dbxref=NCBI_GP:AEF86190.1;Name=AEF86190.1;Note=identified by match to protein family HMM PF03180;gbkey=CDS;product=lipoprotein%2C nlpa family;protein_id=AEF86190.1;transl_table=11 CP001843.1 Genbank gene 1457235 1457798 . - . ID=gene1362;Name=TREPR_2726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2726 CP001843.1 Genbank CDS 1457235 1457798 . - 0 ID=cds1296;Parent=gene1362;Dbxref=NCBI_GP:AEF85511.1;Name=AEF85511.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85511.1;transl_table=11 CP001843.1 Genbank gene 1457800 1459713 . - . ID=gene1363;Name=TREPR_2725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2725 CP001843.1 Genbank CDS 1457800 1459713 . - 0 ID=cds1297;Parent=gene1363;Dbxref=NCBI_GP:AEF85696.1;Name=AEF85696.1;Note=identified by match to protein family HMM PF02878;gbkey=CDS;product=phosphohexose mutase family protein;protein_id=AEF85696.1;transl_table=11 CP001843.1 Genbank gene 1459938 1461128 . + . ID=gene1364;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=TREPR_2724 CP001843.1 Genbank CDS 1459938 1461128 . + 0 ID=cds1298;Parent=gene1364;Dbxref=NCBI_GP:AEF85848.1;Name=AEF85848.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212;gbkey=CDS;gene=iscS;product=cysteine desulfurase;protein_id=AEF85848.1;transl_table=11 CP001843.1 Genbank gene 1461166 1461768 . + . ID=gene1365;Name=TREPR_2723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2723 CP001843.1 Genbank CDS 1461166 1461768 . + 0 ID=cds1299;Parent=gene1365;Dbxref=NCBI_GP:AEF84598.1;Name=AEF84598.1;Note=identified by match to protein family HMM PF01592%3B match to protein family HMM PF04324;gbkey=CDS;product=IscU protein;protein_id=AEF84598.1;transl_table=11 CP001843.1 Genbank gene 1461916 1461988 . + . ID=gene1366;Name=TREPR_3936;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3936 CP001843.1 Genbank tRNA 1461916 1461988 . + . ID=rna26;Parent=gene1366;gbkey=tRNA;product=tRNA-Met CP001843.1 Genbank exon 1461916 1461988 . + . ID=id31;Parent=rna26;gbkey=tRNA;product=tRNA-Met CP001843.1 Genbank gene 1462503 1462898 . + . ID=gene1367;Name=TREPR_2721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2721 CP001843.1 Genbank CDS 1462503 1462898 . + 0 ID=cds1300;Parent=gene1367;Dbxref=NCBI_GP:AEF86989.1;Name=AEF86989.1;gbkey=CDS;product=putative transposase;protein_id=AEF86989.1;transl_table=11 CP001843.1 Genbank gene 1462944 1463141 . + . ID=gene1368;Name=TREPR_2720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2720 CP001843.1 Genbank CDS 1462944 1463141 . + 0 ID=cds1301;Parent=gene1368;Dbxref=NCBI_GP:AEF87026.1;Name=AEF87026.1;gbkey=CDS;product=excisionase/Xis%2C DNA-binding protein;protein_id=AEF87026.1;transl_table=11 CP001843.1 Genbank gene 1463171 1463614 . + . ID=gene1369;Name=TREPR_2719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2719 CP001843.1 Genbank CDS 1463171 1463614 . + 0 ID=cds1302;Parent=gene1369;Dbxref=NCBI_GP:AEF84272.1;Name=AEF84272.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84272.1;transl_table=11 CP001843.1 Genbank gene 1463619 1463867 . + . ID=gene1370;Name=TREPR_2718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2718 CP001843.1 Genbank CDS 1463619 1463867 . + 0 ID=cds1303;Parent=gene1370;Dbxref=NCBI_GP:AEF84640.1;Name=AEF84640.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84640.1;transl_table=11 CP001843.1 Genbank gene 1464321 1464761 . + . ID=gene1371;Name=TREPR_2717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2717 CP001843.1 Genbank CDS 1464321 1464761 . + 0 ID=cds1304;Parent=gene1371;Dbxref=NCBI_GP:AEF85353.1;Name=AEF85353.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85353.1;transl_table=11 CP001843.1 Genbank gene 1464884 1465348 . - . ID=gene1372;Name=TREPR_2716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2716 CP001843.1 Genbank CDS 1464884 1465348 . - 0 ID=cds1305;Parent=gene1372;Dbxref=NCBI_GP:AEF86786.1;Name=AEF86786.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86786.1;transl_table=11 CP001843.1 Genbank gene 1465404 1465637 . - . ID=gene1373;Name=TREPR_2715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2715 CP001843.1 Genbank CDS 1465404 1465637 . - 0 ID=cds1306;Parent=gene1373;Dbxref=NCBI_GP:AEF84217.1;Name=AEF84217.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84217.1;transl_table=11 CP001843.1 Genbank gene 1465851 1466276 . - . ID=gene1374;Name=TREPR_2714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2714 CP001843.1 Genbank CDS 1465851 1466276 . - 0 ID=cds1307;Parent=gene1374;Dbxref=NCBI_GP:AEF85666.1;Name=AEF85666.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85666.1;transl_table=11 CP001843.1 Genbank gene 1466276 1466614 . - . ID=gene1375;Name=TREPR_2713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2713 CP001843.1 Genbank CDS 1466276 1466614 . - 0 ID=cds1308;Parent=gene1375;Dbxref=NCBI_GP:AEF85781.1;Name=AEF85781.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85781.1;transl_table=11 CP001843.1 Genbank gene 1466649 1467920 . - . ID=gene1376;Name=TREPR_2712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2712 CP001843.1 Genbank CDS 1466649 1467920 . - 0 ID=cds1309;Parent=gene1376;Dbxref=NCBI_GP:AEF85596.1;Name=AEF85596.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;product=outer membrane efflux protein;protein_id=AEF85596.1;transl_table=11 CP001843.1 Genbank gene 1467955 1471065 . - . ID=gene1377;Name=TREPR_2711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2711 CP001843.1 Genbank CDS 1467955 1471065 . - 0 ID=cds1310;Parent=gene1377;Dbxref=NCBI_GP:AEF84083.1;Name=AEF84083.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;product=putative acriflavin resistance protein;protein_id=AEF84083.1;transl_table=11 CP001843.1 Genbank gene 1471062 1472174 . - . ID=gene1378;Name=TREPR_2710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2710 CP001843.1 Genbank CDS 1471062 1472174 . - 0 ID=cds1311;Parent=gene1378;Dbxref=NCBI_GP:AEF84935.1;Name=AEF84935.1;Note=identified by match to protein family HMM TIGR01730;gbkey=CDS;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=AEF84935.1;transl_table=11 CP001843.1 Genbank gene 1472511 1472912 . + . ID=gene1379;Name=TREPR_2709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2709 CP001843.1 Genbank CDS 1472511 1472912 . + 0 ID=cds1312;Parent=gene1379;Dbxref=NCBI_GP:AEF85778.1;Name=AEF85778.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=AEF85778.1;transl_table=11 CP001843.1 Genbank gene 1472966 1473400 . + . ID=gene1380;Name=TREPR_2708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2708 CP001843.1 Genbank CDS 1472966 1473400 . + 0 ID=cds1313;Parent=gene1380;Dbxref=NCBI_GP:AEF86733.1;Name=AEF86733.1;Note=identified by match to protein family HMM PF02082;gbkey=CDS;product=RRF2 family protein;protein_id=AEF86733.1;transl_table=11 CP001843.1 Genbank gene 1473408 1473860 . - . ID=gene1381;Name=TREPR_2707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2707 CP001843.1 Genbank CDS 1473408 1473860 . - 0 ID=cds1314;Parent=gene1381;Dbxref=NCBI_GP:AEF84587.1;Name=AEF84587.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;product=transcriptional regulator%2C MarR family;protein_id=AEF84587.1;transl_table=11 CP001843.1 Genbank gene 1473850 1475205 . - . ID=gene1382;Name=TREPR_2706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2706 CP001843.1 Genbank CDS 1473850 1475205 . - 0 ID=cds1315;Parent=gene1382;Dbxref=NCBI_GP:AEF85134.1;Name=AEF85134.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=Na+-driven multidrug efflux pump;protein_id=AEF85134.1;transl_table=11 CP001843.1 Genbank gene 1475297 1476388 . - . ID=gene1383;Name=TREPR_2705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2705 CP001843.1 Genbank CDS 1475297 1476388 . - 0 ID=cds1316;Parent=gene1383;Dbxref=NCBI_GP:AEF86574.1;Name=AEF86574.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=Two component sensor kinase;protein_id=AEF86574.1;transl_table=11 CP001843.1 Genbank gene 1476385 1477056 . - . ID=gene1384;Name=TREPR_2704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2704 CP001843.1 Genbank CDS 1476385 1477056 . - 0 ID=cds1317;Parent=gene1384;Dbxref=NCBI_GP:AEF83743.1;Name=AEF83743.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=transcriptional regulator;protein_id=AEF83743.1;transl_table=11 CP001843.1 Genbank gene 1477034 1477240 . - . ID=gene1385;Name=TREPR_2703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2703 CP001843.1 Genbank CDS 1477034 1477240 . - 0 ID=cds1318;Parent=gene1385;Dbxref=NCBI_GP:AEF84680.1;Name=AEF84680.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84680.1;transl_table=11 CP001843.1 Genbank gene 1477250 1477897 . + . ID=gene1386;Name=TREPR_2702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2702 CP001843.1 Genbank CDS 1477250 1477897 . + 0 ID=cds1319;Parent=gene1386;Dbxref=NCBI_GP:AEF85670.1;Name=AEF85670.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85670.1;transl_table=11 CP001843.1 Genbank gene 1477888 1478955 . + . ID=gene1387;Name=TREPR_2701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2701 CP001843.1 Genbank CDS 1477888 1478955 . + 0 ID=cds1320;Parent=gene1387;Dbxref=NCBI_GP:AEF84263.1;Name=AEF84263.1;Note=identified by match to protein family HMM PF07728;gbkey=CDS;product=ATPase%2C AAA family;protein_id=AEF84263.1;transl_table=11 CP001843.1 Genbank gene 1479006 1480064 . + . ID=gene1388;Name=TREPR_2700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2700 CP001843.1 Genbank CDS 1479006 1480064 . + 0 ID=cds1321;Parent=gene1388;Dbxref=NCBI_GP:AEF84434.1;Name=AEF84434.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84434.1;transl_table=11 CP001843.1 Genbank gene 1480173 1481195 . + . ID=gene1389;Name=TREPR_2699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2699 CP001843.1 Genbank CDS 1480173 1481195 . + 0 ID=cds1322;Parent=gene1389;Dbxref=NCBI_GP:AEF85435.1;Name=AEF85435.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85435.1;transl_table=11 CP001843.1 Genbank gene 1481188 1482087 . + . ID=gene1390;Name=TREPR_2698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2698 CP001843.1 Genbank CDS 1481188 1482087 . + 0 ID=cds1323;Parent=gene1390;Dbxref=NCBI_GP:AEF86406.1;Name=AEF86406.1;Note=identified by match to protein family HMM PF03773;gbkey=CDS;product=putative membrane protein;protein_id=AEF86406.1;transl_table=11 CP001843.1 Genbank gene 1482240 1483457 . + . ID=gene1391;Name=TREPR_2697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2697 CP001843.1 Genbank CDS 1482240 1483457 . + 0 ID=cds1324;Parent=gene1391;Dbxref=NCBI_GP:AEF83830.1;Name=AEF83830.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;product=aspartate aminotransferase;protein_id=AEF83830.1;transl_table=11 CP001843.1 Genbank gene 1483489 1484811 . - . ID=gene1392;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=TREPR_2696 CP001843.1 Genbank CDS 1483489 1484811 . - 0 ID=cds1325;Parent=gene1392;Dbxref=NCBI_GP:AEF84774.1;Name=AEF84774.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=AEF84774.1;transl_table=11 CP001843.1 Genbank gene 1484858 1485652 . - . ID=gene1393;Name=TREPR_2695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2695 CP001843.1 Genbank CDS 1484858 1485652 . - 0 ID=cds1326;Parent=gene1393;Dbxref=NCBI_GP:AEF84893.1;Name=AEF84893.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84893.1;transl_table=11 CP001843.1 Genbank gene 1485669 1486901 . - . ID=gene1394;Name=TREPR_2694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2694 CP001843.1 Genbank CDS 1485669 1486901 . - 0 ID=cds1327;Parent=gene1394;Dbxref=NCBI_GP:AEF85986.1;Name=AEF85986.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85986.1;transl_table=11 CP001843.1 Genbank gene 1486935 1487654 . - . ID=gene1395;Name=TREPR_2693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2693 CP001843.1 Genbank CDS 1486935 1487654 . - 0 ID=cds1328;Parent=gene1395;Dbxref=NCBI_GP:AEF86974.1;Name=AEF86974.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86974.1;transl_table=11 CP001843.1 Genbank gene 1487773 1488357 . - . ID=gene1396;Name=TREPR_2692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2692 CP001843.1 Genbank CDS 1487773 1488357 . - 0 ID=cds1329;Parent=gene1396;Dbxref=NCBI_GP:AEF83569.1;Name=AEF83569.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83569.1;transl_table=11 CP001843.1 Genbank gene 1488410 1488886 . + . ID=gene1397;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=TREPR_2691 CP001843.1 Genbank CDS 1488410 1488886 . + 0 ID=cds1330;Parent=gene1397;Dbxref=NCBI_GP:AEF84797.1;Name=AEF84797.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510;gbkey=CDS;gene=coaD;product=pantetheine-phosphate adenylyltransferase;protein_id=AEF84797.1;transl_table=11 CP001843.1 Genbank gene 1489908 1490144 . + . ID=gene1398;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=TREPR_2690 CP001843.1 Genbank CDS 1489908 1490144 . + 0 ID=cds1331;Parent=gene1398;Dbxref=NCBI_GP:AEF83804.1;Name=AEF83804.1;Note=identified by match to protein family HMM PF00550%3B match to protein family HMM TIGR00517;gbkey=CDS;gene=acpP;product=acyl carrier protein;protein_id=AEF83804.1;transl_table=11 CP001843.1 Genbank gene 1490110 1490961 . + . ID=gene1399;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=TREPR_2689 CP001843.1 Genbank CDS 1490110 1490961 . + 0 ID=cds1332;Parent=gene1399;Dbxref=NCBI_GP:AEF86768.1;Name=AEF86768.1;Note=identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=AEF86768.1;transl_table=11 CP001843.1 Genbank gene 1491041 1491556 . + . ID=gene1400;Name=TREPR_2688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2688 CP001843.1 Genbank CDS 1491041 1491556 . + 0 ID=cds1333;Parent=gene1400;Dbxref=NCBI_GP:AEF86100.1;Name=AEF86100.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86100.1;transl_table=11 CP001843.1 Genbank gene 1491566 1492927 . - . ID=gene1401;Name=TREPR_2687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2687 CP001843.1 Genbank CDS 1491566 1492927 . - 0 ID=cds1334;Parent=gene1401;Dbxref=NCBI_GP:AEF85082.1;Name=AEF85082.1;Note=identified by match to protein family HMM PF01743%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277;gbkey=CDS;product=tRNA adenylyltransferase/tRNA cytidylyltransferase;protein_id=AEF85082.1;transl_table=11 CP001843.1 Genbank gene 1493031 1493678 . + . ID=gene1402;Name=TREPR_2686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2686 CP001843.1 Genbank CDS 1493031 1493678 . + 0 ID=cds1335;Parent=gene1402;Dbxref=NCBI_GP:AEF84196.1;Name=AEF84196.1;Note=identified by match to protein family HMM PF04263%3B match to protein family HMM TIGR01378;gbkey=CDS;product=thiamine diphosphokinase;protein_id=AEF84196.1;transl_table=11 CP001843.1 Genbank gene 1493774 1494055 . + . ID=gene1403;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=TREPR_2685 CP001843.1 Genbank CDS 1493774 1494055 . + 0 ID=cds1336;Parent=gene1403;Dbxref=NCBI_GP:AEF86302.1;Name=AEF86302.1;Note=identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166;gbkey=CDS;gene=rpsF;product=ribosomal protein S6;protein_id=AEF86302.1;transl_table=11 CP001843.1 Genbank gene 1494061 1494528 . + . ID=gene1404;Name=TREPR_2684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2684 CP001843.1 Genbank CDS 1494061 1494528 . + 0 ID=cds1337;Parent=gene1404;Dbxref=NCBI_GP:AEF85319.1;Name=AEF85319.1;Note=identified by match to protein family HMM PF00436%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00621;gbkey=CDS;product=plasmid-derived single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein);protein_id=AEF85319.1;transl_table=11 CP001843.1 Genbank gene 1494552 1494872 . + . ID=gene1405;Name=TREPR_2683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2683 CP001843.1 Genbank CDS 1494552 1494872 . + 0 ID=cds1338;Parent=gene1405;Dbxref=NCBI_GP:AEF84664.1;Name=AEF84664.1;Note=identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165;gbkey=CDS;product=30S ribosomal protein S18;protein_id=AEF84664.1;transl_table=11 CP001843.1 Genbank gene 1494970 1495947 . + . ID=gene1406;Name=TREPR_2682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2682 CP001843.1 Genbank CDS 1494970 1495947 . + 0 ID=cds1339;Parent=gene1406;Dbxref=NCBI_GP:AEF86789.1;Name=AEF86789.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF86789.1;transl_table=11 CP001843.1 Genbank gene 1496093 1496686 . + . ID=gene1407;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=TREPR_2681 CP001843.1 Genbank CDS 1496093 1496686 . + 0 ID=cds1340;Parent=gene1407;Dbxref=NCBI_GP:AEF86208.1;Name=AEF86208.1;Note=identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158;gbkey=CDS;gene=rplI;product=ribosomal protein L9;protein_id=AEF86208.1;transl_table=11 CP001843.1 Genbank gene 1496687 1498066 . + . ID=gene1408;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=TREPR_2680 CP001843.1 Genbank CDS 1496687 1498066 . + 0 ID=cds1341;Parent=gene1408;Dbxref=NCBI_GP:AEF86987.1;Name=AEF86987.1;Note=identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665;gbkey=CDS;gene=dnaB;product=replicative DNA helicase;protein_id=AEF86987.1;transl_table=11 CP001843.1 Genbank gene 1498342 1498638 . + . ID=gene1409;Name=TREPR_2678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2678 CP001843.1 Genbank CDS 1498342 1498638 . + 0 ID=cds1342;Parent=gene1409;Dbxref=NCBI_GP:AEF85303.1;Name=AEF85303.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85303.1;transl_table=11 CP001843.1 Genbank gene 1498635 1500605 . - . ID=gene1410;Name=TREPR_2679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2679 CP001843.1 Genbank CDS 1498635 1500605 . - 0 ID=cds1343;Parent=gene1410;Dbxref=NCBI_GP:AEF84520.1;Name=AEF84520.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84520.1;transl_table=11 CP001843.1 Genbank gene 1500735 1502090 . - . ID=gene1411;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=TREPR_2677 CP001843.1 Genbank CDS 1500735 1502090 . - 0 ID=cds1344;Parent=gene1411;Dbxref=NCBI_GP:AEF86562.1;Name=AEF86562.1;Note=identified by match to protein family HMM PF00595%3B match to protein family HMM PF02163%3B match to protein family HMM TIGR00054;gbkey=CDS;gene=rseP;product=RIP metalloprotease RseP;protein_id=AEF86562.1;transl_table=11 CP001843.1 Genbank gene 1502091 1503239 . - . ID=gene1412;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=TREPR_2675 CP001843.1 Genbank CDS 1502091 1503239 . - 0 ID=cds1345;Parent=gene1412;Dbxref=NCBI_GP:AEF85093.1;Name=AEF85093.1;Note=identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243;gbkey=CDS;gene=dxr;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=AEF85093.1;transl_table=11 CP001843.1 Genbank gene 1503254 1504108 . - . ID=gene1413;Name=cdsA_2;gbkey=Gene;gene=cdsA_2;gene_biotype=protein_coding;locus_tag=TREPR_2674 CP001843.1 Genbank CDS 1503254 1504108 . - 0 ID=cds1346;Parent=gene1413;Dbxref=NCBI_GP:AEF85889.1;Name=AEF85889.1;Note=identified by match to protein family HMM PF01148;gbkey=CDS;gene=cdsA_2;product=phosphatidate cytidylyltransferase;protein_id=AEF85889.1;transl_table=11 CP001843.1 Genbank gene 1504101 1504844 . - . ID=gene1414;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=TREPR_2673 CP001843.1 Genbank CDS 1504101 1504844 . - 0 ID=cds1347;Parent=gene1414;Dbxref=NCBI_GP:AEF83550.1;Name=AEF83550.1;Note=identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055;gbkey=CDS;gene=uppS;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=AEF83550.1;transl_table=11 CP001843.1 Genbank gene 1504899 1505453 . - . ID=gene1415;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=TREPR_2672 CP001843.1 Genbank CDS 1504899 1505453 . - 0 ID=cds1348;Parent=gene1415;Dbxref=NCBI_GP:AEF84310.1;Name=AEF84310.1;Note=identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=AEF84310.1;transl_table=11 CP001843.1 Genbank gene 1505471 1506319 . - . ID=gene1416;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=TREPR_2671 CP001843.1 Genbank CDS 1505471 1506319 . - 0 ID=cds1349;Parent=gene1416;Dbxref=NCBI_GP:AEF84764.1;Name=AEF84764.1;Note=identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116;gbkey=CDS;gene=tsf;product=translation elongation factor Ts;protein_id=AEF84764.1;transl_table=11 CP001843.1 Genbank gene 1506408 1507328 . - . ID=gene1417;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=TREPR_2670 CP001843.1 Genbank CDS 1506408 1507328 . - 0 ID=cds1350;Parent=gene1417;Dbxref=NCBI_GP:AEF83820.1;Name=AEF83820.1;Note=identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011;gbkey=CDS;gene=rpsB;product=ribosomal protein S2;protein_id=AEF83820.1;transl_table=11 CP001843.1 Genbank gene 1507492 1508079 . - . ID=gene1418;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=TREPR_2669 CP001843.1 Genbank CDS 1507492 1508079 . - 0 ID=cds1351;Parent=gene1418;Dbxref=NCBI_GP:AEF85524.1;Name=AEF85524.1;Note=identified by match to protein family HMM PF02545%3B match to protein family HMM TIGR00172;gbkey=CDS;gene=maf;product=septum formation protein Maf;protein_id=AEF85524.1;transl_table=11 CP001843.1 Genbank gene 1508169 1508645 . + . ID=gene1419;Name=TREPR_2668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2668 CP001843.1 Genbank CDS 1508169 1508645 . + 0 ID=cds1352;Parent=gene1419;Dbxref=NCBI_GP:AEF83665.1;Name=AEF83665.1;gbkey=CDS;product=thioesterase family protein;protein_id=AEF83665.1;transl_table=11 CP001843.1 Genbank gene 1508648 1510480 . - . ID=gene1420;Name=TREPR_2667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2667 CP001843.1 Genbank CDS 1508648 1510480 . - 0 ID=cds1353;Parent=gene1420;Dbxref=NCBI_GP:AEF84424.1;Name=AEF84424.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=ABC-type multidrug/protein/lipid transport system%2C ATPase component;protein_id=AEF84424.1;transl_table=11 CP001843.1 Genbank gene 1510482 1512224 . - . ID=gene1421;Name=TREPR_2666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2666 CP001843.1 Genbank CDS 1510482 1512224 . - 0 ID=cds1354;Parent=gene1421;Dbxref=NCBI_GP:AEF86885.1;Name=AEF86885.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=MDR-type ABC transporter;protein_id=AEF86885.1;transl_table=11 CP001843.1 Genbank gene 1512375 1512448 . + . ID=gene1422;Name=TREPR_3935;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3935 CP001843.1 Genbank tRNA 1512375 1512448 . + . ID=rna27;Parent=gene1422;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank exon 1512375 1512448 . + . ID=id32;Parent=rna27;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank gene 1512784 1513290 . + . ID=gene1423;Name=TREPR_2664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2664 CP001843.1 Genbank CDS 1512784 1513290 . + 0 ID=cds1355;Parent=gene1423;Dbxref=NCBI_GP:AEF83703.1;Name=AEF83703.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83703.1;transl_table=11 CP001843.1 Genbank gene 1513303 1514667 . + . ID=gene1424;Name=TREPR_2663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2663 CP001843.1 Genbank CDS 1513303 1514667 . + 0 ID=cds1356;Parent=gene1424;Dbxref=NCBI_GP:AEF84975.1;Name=AEF84975.1;Note=identified by match to protein family HMM PF07523;gbkey=CDS;product=putative exopolygalacturonate lyase;protein_id=AEF84975.1;transl_table=11 CP001843.1 Genbank gene 1514680 1516935 . + . ID=gene1425;Name=TREPR_2662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2662 CP001843.1 Genbank CDS 1514680 1516935 . + 0 ID=cds1357;Parent=gene1425;Dbxref=NCBI_GP:AEF86117.1;Name=AEF86117.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86117.1;transl_table=11 CP001843.1 Genbank gene 1516945 1518144 . - . ID=gene1426;Name=TREPR_2661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2661 CP001843.1 Genbank CDS 1516945 1518144 . - 0 ID=cds1358;Parent=gene1426;Dbxref=NCBI_GP:AEF84155.1;Name=AEF84155.1;Note=identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00127;gbkey=CDS;product=isocitrate dehydrogenase%2C NADP-dependent;protein_id=AEF84155.1;transl_table=11 CP001843.1 Genbank gene 1518268 1519320 . + . ID=gene1427;Name=TREPR_2660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2660 CP001843.1 Genbank CDS 1518268 1519320 . + 0 ID=cds1359;Parent=gene1427;Dbxref=NCBI_GP:AEF85087.1;Name=AEF85087.1;Note=identified by match to protein family HMM PF01263;gbkey=CDS;product=aldose 1-epimerase (Mutarotase);protein_id=AEF85087.1;transl_table=11 CP001843.1 Genbank gene 1519442 1520056 . + . ID=gene1428;Name=TREPR_2658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2658 CP001843.1 Genbank CDS 1519442 1520056 . + 0 ID=cds1360;Parent=gene1428;Dbxref=NCBI_GP:AEF86698.1;Name=AEF86698.1;gbkey=CDS;product=V-type ATP synthase subunit E (V-type ATPase subunit E);protein_id=AEF86698.1;transl_table=11 CP001843.1 Genbank gene 1520060 1520662 . + . ID=gene1429;Name=TREPR_2657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2657 CP001843.1 Genbank CDS 1520060 1520662 . + 0 ID=cds1361;Parent=gene1429;Dbxref=NCBI_GP:AEF83828.1;Name=AEF83828.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83828.1;transl_table=11 CP001843.1 Genbank gene 1520659 1522419 . + . ID=gene1430;Name=TREPR_2656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2656 CP001843.1 Genbank CDS 1520659 1522419 . + 0 ID=cds1362;Parent=gene1430;Dbxref=NCBI_GP:AEF84785.1;Name=AEF84785.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF02874;gbkey=CDS;product=V-type sodium ATP synthase%2C A subunit;protein_id=AEF84785.1;transl_table=11 CP001843.1 Genbank gene 1522489 1523787 . + . ID=gene1431;Name=TREPR_2655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2655 CP001843.1 Genbank CDS 1522489 1523787 . + 0 ID=cds1363;Parent=gene1431;Dbxref=NCBI_GP:AEF86081.1;Name=AEF86081.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF02874;gbkey=CDS;product=V-type sodium ATP synthase%2C B subunit;protein_id=AEF86081.1;transl_table=11 CP001843.1 Genbank gene 1523799 1524401 . + . ID=gene1432;Name=TREPR_2654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2654 CP001843.1 Genbank CDS 1523799 1524401 . + 0 ID=cds1364;Parent=gene1432;Dbxref=NCBI_GP:AEF86390.1;Name=AEF86390.1;Note=identified by match to protein family HMM PF01813%3B match to protein family HMM TIGR00309;gbkey=CDS;product=V-type ATPase%2C D subunit;protein_id=AEF86390.1;transl_table=11 CP001843.1 Genbank gene 1524427 1526364 . + . ID=gene1433;Name=TREPR_2653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2653 CP001843.1 Genbank CDS 1524427 1526364 . + 0 ID=cds1365;Parent=gene1433;Dbxref=NCBI_GP:AEF86936.1;Name=AEF86936.1;Note=identified by match to protein family HMM PF01496;gbkey=CDS;product=V-type ATP synthase subunit I 1 (V-type ATPase subunit I1);protein_id=AEF86936.1;transl_table=11 CP001843.1 Genbank gene 1526649 1527089 . + . ID=gene1434;Name=TREPR_2652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2652 CP001843.1 Genbank CDS 1526649 1527089 . + 0 ID=cds1366;Parent=gene1434;Dbxref=NCBI_GP:AEF83966.1;Name=AEF83966.1;Note=identified by match to protein family HMM PF00137;gbkey=CDS;product=ATP synthase subunit K;protein_id=AEF83966.1;transl_table=11 CP001843.1 Genbank gene 1527168 1528247 . + . ID=gene1435;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=TREPR_2651 CP001843.1 Genbank CDS 1527168 1528247 . + 0 ID=cds1367;Parent=gene1435;Dbxref=NCBI_GP:AEF84971.1;Name=AEF84971.1;Note=identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612;gbkey=CDS;gene=ispG;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=AEF84971.1;transl_table=11 CP001843.1 Genbank gene 1528564 1529124 . + . ID=gene1436;Name=TREPR_2650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2650 CP001843.1 Genbank CDS 1528564 1529124 . + 0 ID=cds1368;Parent=gene1436;Dbxref=NCBI_GP:AEF85664.1;Name=AEF85664.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85664.1;transl_table=11 CP001843.1 Genbank gene 1529288 1530457 . + . ID=gene1437;Name=TREPR_2649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2649 CP001843.1 Genbank CDS 1529288 1530457 . + 0 ID=cds1369;Parent=gene1437;Dbxref=NCBI_GP:AEF84985.1;Name=AEF84985.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84985.1;transl_table=11 CP001843.1 Genbank gene 1530518 1531096 . + . ID=gene1438;Name=TREPR_2648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2648 CP001843.1 Genbank CDS 1530518 1531096 . + 0 ID=cds1370;Parent=gene1438;Dbxref=NCBI_GP:AEF85580.1;Name=AEF85580.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85580.1;transl_table=11 CP001843.1 Genbank gene 1531121 1532191 . + . ID=gene1439;Name=TREPR_2647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2647 CP001843.1 Genbank CDS 1531121 1532191 . + 0 ID=cds1371;Parent=gene1439;Dbxref=NCBI_GP:AEF86575.1;Name=AEF86575.1;gbkey=CDS;product=putative uracil phosphoribosyltransferase (umppyrophosphorylase) (uprtase);protein_id=AEF86575.1;transl_table=11 CP001843.1 Genbank gene 1532188 1533213 . + . ID=gene1440;Name=TREPR_2646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2646 CP001843.1 Genbank CDS 1532188 1533213 . + 0 ID=cds1372;Parent=gene1440;Dbxref=NCBI_GP:AEF83588.1;Name=AEF83588.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07720;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF83588.1;transl_table=11 CP001843.1 Genbank gene 1533228 1533515 . + . ID=gene1441;Name=TREPR_2645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2645 CP001843.1 Genbank CDS 1533228 1533515 . + 0 ID=cds1373;Parent=gene1441;Dbxref=NCBI_GP:AEF85649.1;Name=AEF85649.1;Note=identified by match to protein family HMM PF04456;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85649.1;transl_table=11 CP001843.1 Genbank gene 1533525 1534217 . + . ID=gene1442;Name=TREPR_2643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2643 CP001843.1 Genbank CDS 1533525 1534217 . + 0 ID=cds1374;Parent=gene1442;Dbxref=NCBI_GP:AEF86708.1;Name=AEF86708.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86708.1;transl_table=11 CP001843.1 Genbank gene 1534209 1536257 . - . ID=gene1443;Name=TREPR_2644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2644 CP001843.1 Genbank CDS 1534209 1536257 . - 0 ID=cds1375;Parent=gene1443;Dbxref=NCBI_GP:AEF86396.1;Name=AEF86396.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF86396.1;transl_table=11 CP001843.1 Genbank gene 1536378 1537058 . + . ID=gene1444;Name=TREPR_2642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2642 CP001843.1 Genbank CDS 1536378 1537058 . + 0 ID=cds1376;Parent=gene1444;Dbxref=NCBI_GP:AEF84294.1;Name=AEF84294.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84294.1;transl_table=11 CP001843.1 Genbank gene 1537060 1537734 . + . ID=gene1445;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=TREPR_2641 CP001843.1 Genbank CDS 1537060 1537734 . + 0 ID=cds1377;Parent=gene1445;Dbxref=NCBI_GP:AEF85206.1;Name=AEF85206.1;Note=identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=AEF85206.1;transl_table=11 CP001843.1 Genbank gene 1537752 1539722 . + . ID=gene1446;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=TREPR_2640 CP001843.1 Genbank CDS 1537752 1539722 . + 0 ID=cds1378;Parent=gene1446;Dbxref=NCBI_GP:AEF85331.1;Name=AEF85331.1;Note=identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575;gbkey=CDS;gene=ligA;product=DNA ligase (NAD(+));protein_id=AEF85331.1;transl_table=11 CP001843.1 Genbank gene 1539719 1542496 . + . ID=gene1447;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=TREPR_2639 CP001843.1 Genbank CDS 1539719 1542496 . + 0 ID=cds1379;Parent=gene1447;Dbxref=NCBI_GP:AEF86379.1;Name=AEF86379.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04408%3B match to protein family HMM PF08482%3B match to protein family HMM TIGR01970;gbkey=CDS;gene=hrpB;product=ATP-dependent helicase HrpB;protein_id=AEF86379.1;transl_table=11 CP001843.1 Genbank gene 1542721 1542864 . + . ID=gene1448;Name=TREPR_2638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2638 CP001843.1 Genbank CDS 1542721 1542864 . + 0 ID=cds1380;Parent=gene1448;Dbxref=NCBI_GP:AEF83839.1;Name=AEF83839.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83839.1;transl_table=11 CP001843.1 Genbank pseudogene 1542884 1543300 . + . ID=gene1449;Name=TREPR_2637;Note=hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2637;pseudo=true CP001843.1 Genbank gene 1543306 1543503 . + . ID=gene1450;Name=TREPR_2636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2636 CP001843.1 Genbank CDS 1543306 1543503 . + 0 ID=cds1381;Parent=gene1450;Dbxref=NCBI_GP:AEF84909.1;Name=AEF84909.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84909.1;transl_table=11 CP001843.1 Genbank gene 1543543 1544169 . - . ID=gene1451;Name=TREPR_2635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2635 CP001843.1 Genbank CDS 1543543 1544169 . - 0 ID=cds1382;Parent=gene1451;Dbxref=NCBI_GP:AEF86131.1;Name=AEF86131.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86131.1;transl_table=11 CP001843.1 Genbank gene 1544144 1544809 . - . ID=gene1452;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=TREPR_2634 CP001843.1 Genbank CDS 1544144 1544809 . - 0 ID=cds1383;Parent=gene1452;Dbxref=NCBI_GP:AEF86884.1;Name=AEF86884.1;Note=identified by match to protein family HMM PF02223%3B match to protein family HMM TIGR00041;gbkey=CDS;gene=tmk;product=dTMP kinase;protein_id=AEF86884.1;transl_table=11 CP001843.1 Genbank gene 1544960 1549561 . + . ID=gene1453;Name=TREPR_2633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2633 CP001843.1 Genbank CDS 1544960 1549561 . + 0 ID=cds1384;Parent=gene1453;Dbxref=NCBI_GP:AEF86125.1;Name=AEF86125.1;Note=identified by match to protein family HMM PF04357;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86125.1;transl_table=11 CP001843.1 Genbank gene 1549561 1552071 . + . ID=gene1454;Name=yaeT;gbkey=Gene;gene=yaeT;gene_biotype=protein_coding;locus_tag=TREPR_2632 CP001843.1 Genbank CDS 1549561 1552071 . + 0 ID=cds1385;Parent=gene1454;Dbxref=NCBI_GP:AEF86891.1;Name=AEF86891.1;Note=identified by match to protein family HMM PF01103%3B match to protein family HMM PF07244%3B match to protein family HMM PF08479%3B match to protein family HMM TIGR03303;gbkey=CDS;gene=yaeT;product=outer membrane protein assembly complex%2C YaeT protein;protein_id=AEF86891.1;transl_table=11 CP001843.1 Genbank gene 1552087 1552617 . + . ID=gene1455;Name=TREPR_2631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2631 CP001843.1 Genbank CDS 1552087 1552617 . + 0 ID=cds1386;Parent=gene1455;Dbxref=NCBI_GP:AEF84659.1;Name=AEF84659.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;product=cationic outer membrane protein;protein_id=AEF84659.1;transl_table=11 CP001843.1 Genbank gene 1552704 1555424 . + . ID=gene1456;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=TREPR_2630 CP001843.1 Genbank CDS 1552704 1555424 . + 0 ID=cds1387;Parent=gene1456;Dbxref=NCBI_GP:AEF85354.1;Name=AEF85354.1;Note=identified by match to protein family HMM PF00488%3B match to protein family HMM PF01624%3B match to protein family HMM PF05188%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070;gbkey=CDS;gene=mutS;product=DNA mismatch repair protein MutS;protein_id=AEF85354.1;transl_table=11 CP001843.1 Genbank gene 1555528 1556385 . + . ID=gene1457;Name=TREPR_2629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2629 CP001843.1 Genbank CDS 1555528 1556385 . + 0 ID=cds1388;Parent=gene1457;Dbxref=NCBI_GP:AEF84564.1;Name=AEF84564.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84564.1;transl_table=11 CP001843.1 Genbank gene 1556399 1557154 . + . ID=gene1458;Name=TREPR_2628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2628 CP001843.1 Genbank CDS 1556399 1557154 . + 0 ID=cds1389;Parent=gene1458;Dbxref=NCBI_GP:AEF85589.1;Name=AEF85589.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85589.1;transl_table=11 CP001843.1 Genbank gene 1557168 1558025 . - . ID=gene1459;Name=TREPR_2627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2627 CP001843.1 Genbank CDS 1557168 1558025 . - 0 ID=cds1390;Parent=gene1459;Dbxref=NCBI_GP:AEF84336.1;Name=AEF84336.1;Note=identified by match to protein family HMM TIGR00687;gbkey=CDS;product=pyridoxal kinase;protein_id=AEF84336.1;transl_table=11 CP001843.1 Genbank gene 1558038 1558985 . - . ID=gene1460;Name=TREPR_2626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2626 CP001843.1 Genbank CDS 1558038 1558985 . - 0 ID=cds1391;Parent=gene1460;Dbxref=NCBI_GP:AEF83555.1;Name=AEF83555.1;gbkey=CDS;product=transcriptional regulator;protein_id=AEF83555.1;transl_table=11 CP001843.1 Genbank gene 1558972 1559640 . - . ID=gene1461;Name=TREPR_2625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2625 CP001843.1 Genbank CDS 1558972 1559640 . - 0 ID=cds1392;Parent=gene1461;Dbxref=NCBI_GP:AEF85867.1;Name=AEF85867.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;product=metallophosphoesterase;protein_id=AEF85867.1;transl_table=11 CP001843.1 Genbank gene 1559763 1560470 . + . ID=gene1462;Name=TREPR_2624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2624 CP001843.1 Genbank CDS 1559763 1560470 . + 0 ID=cds1393;Parent=gene1462;Dbxref=NCBI_GP:AEF86424.1;Name=AEF86424.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF86424.1;transl_table=11 CP001843.1 Genbank gene 1560488 1562473 . + . ID=gene1463;Name=TREPR_2623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2623 CP001843.1 Genbank CDS 1560488 1562473 . + 0 ID=cds1394;Parent=gene1463;Dbxref=NCBI_GP:AEF84150.1;Name=AEF84150.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07720%3B match to protein family HMM PF07721;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF84150.1;transl_table=11 CP001843.1 Genbank gene 1562546 1562815 . + . ID=gene1464;Name=TREPR_2622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2622 CP001843.1 Genbank CDS 1562546 1562815 . + 0 ID=cds1395;Parent=gene1464;Dbxref=NCBI_GP:AEF84910.1;Name=AEF84910.1;Note=identified by match to protein family HMM PF01842;gbkey=CDS;product=ACT domain protein;protein_id=AEF84910.1;transl_table=11 CP001843.1 Genbank gene 1562948 1564309 . + . ID=gene1465;Name=TREPR_2621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2621 CP001843.1 Genbank CDS 1562948 1564309 . + 0 ID=cds1396;Parent=gene1465;Dbxref=NCBI_GP:AEF85436.1;Name=AEF85436.1;Note=identified by match to protein family HMM PF05167;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85436.1;transl_table=11 CP001843.1 Genbank gene 1564379 1564618 . + . ID=gene1466;Name=TREPR_2620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2620 CP001843.1 Genbank CDS 1564379 1564618 . + 0 ID=cds1397;Parent=gene1466;Dbxref=NCBI_GP:AEF84661.1;Name=AEF84661.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84661.1;transl_table=11 CP001843.1 Genbank gene 1564611 1564874 . + . ID=gene1467;Name=TREPR_2619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2619 CP001843.1 Genbank CDS 1564611 1564874 . + 0 ID=cds1398;Parent=gene1467;Dbxref=NCBI_GP:AEF84260.1;Name=AEF84260.1;Note=identified by match to protein family HMM PF06769%3B match to protein family HMM TIGR02116;gbkey=CDS;product=addiction module toxin%2C Txe/YoeB family;protein_id=AEF84260.1;transl_table=11 CP001843.1 Genbank gene 1565153 1566250 . + . ID=gene1468;Name=TREPR_2618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2618 CP001843.1 Genbank CDS 1565153 1566250 . + 0 ID=cds1399;Parent=gene1468;Dbxref=NCBI_GP:AEF86194.1;Name=AEF86194.1;Note=identified by match to protein family HMM PF09479%3B match to protein family HMM TIGR02543;gbkey=CDS;product=repeat protein;protein_id=AEF86194.1;transl_table=11 CP001843.1 Genbank pseudogene 1566265 1568820 . + . ID=gene1469;Name=TREPR_2617;Note=sperm-activating peptides family%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2617;pseudo=true CP001843.1 Genbank gene 1568928 1569215 . - . ID=gene1470;Name=TREPR_2616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2616 CP001843.1 Genbank CDS 1568928 1569215 . - 0 ID=cds1400;Parent=gene1470;Dbxref=NCBI_GP:AEF84920.1;Name=AEF84920.1;gbkey=CDS;product=transcriptional Regulator%2C XRE family;protein_id=AEF84920.1;transl_table=11 CP001843.1 Genbank gene 1569215 1569355 . - . ID=gene1471;Name=TREPR_2615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2615 CP001843.1 Genbank CDS 1569215 1569355 . - 0 ID=cds1401;Parent=gene1471;Dbxref=NCBI_GP:AEF86576.1;Name=AEF86576.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86576.1;transl_table=11 CP001843.1 Genbank gene 1569484 1569663 . + . ID=gene1472;Name=TREPR_2614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2614 CP001843.1 Genbank CDS 1569484 1569663 . + 0 ID=cds1402;Parent=gene1472;Dbxref=NCBI_GP:AEF85581.1;Name=AEF85581.1;Note=identified by match to protein family HMM PF07927;gbkey=CDS;product=conserved domain protein;protein_id=AEF85581.1;transl_table=11 CP001843.1 Genbank gene 1569660 1570088 . + . ID=gene1473;Name=TREPR_2613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2613 CP001843.1 Genbank CDS 1569660 1570088 . + 0 ID=cds1403;Parent=gene1473;Dbxref=NCBI_GP:AEF86588.1;Name=AEF86588.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM PF03681;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86588.1;transl_table=11 CP001843.1 Genbank gene 1570110 1570604 . + . ID=gene1474;Name=TREPR_2612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2612 CP001843.1 Genbank CDS 1570110 1570604 . + 0 ID=cds1404;Parent=gene1474;Dbxref=NCBI_GP:AEF85573.1;Name=AEF85573.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85573.1;transl_table=11 CP001843.1 Genbank gene 1570626 1571309 . + . ID=gene1475;Name=TREPR_2611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2611 CP001843.1 Genbank CDS 1570626 1571309 . + 0 ID=cds1405;Parent=gene1475;Dbxref=NCBI_GP:AEF85227.1;Name=AEF85227.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85227.1;transl_table=11 CP001843.1 Genbank gene 1571356 1573320 . - . ID=gene1476;Name=TREPR_2610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2610 CP001843.1 Genbank CDS 1571356 1573320 . - 0 ID=cds1406;Parent=gene1476;Dbxref=NCBI_GP:AEF84283.1;Name=AEF84283.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84283.1;transl_table=11 CP001843.1 Genbank gene 1573433 1575946 . + . ID=gene1477;Name=TREPR_2608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2608 CP001843.1 Genbank CDS 1573433 1575946 . + 0 ID=cds1407;Parent=gene1477;Dbxref=NCBI_GP:AEF86604.1;Name=AEF86604.1;gbkey=CDS;product=probable ATP-dependent helicase YoaA;protein_id=AEF86604.1;transl_table=11 CP001843.1 Genbank gene 1575963 1577465 . - . ID=gene1478;Name=TREPR_2607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2607 CP001843.1 Genbank CDS 1575963 1577465 . - 0 ID=cds1408;Parent=gene1478;Dbxref=NCBI_GP:AEF86359.1;Name=AEF86359.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86359.1;transl_table=11 CP001843.1 Genbank gene 1577529 1577948 . - . ID=gene1479;Name=TREPR_2606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2606 CP001843.1 Genbank CDS 1577529 1577948 . - 0 ID=cds1409;Parent=gene1479;Dbxref=NCBI_GP:AEF85377.1;Name=AEF85377.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;product=transcriptional regulator%2C BadM/Rrf2 family;protein_id=AEF85377.1;transl_table=11 CP001843.1 Genbank gene 1578138 1580123 . - . ID=gene1480;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=TREPR_2605 CP001843.1 Genbank CDS 1578138 1580123 . - 0 ID=cds1410;Parent=gene1480;Dbxref=NCBI_GP:AEF85167.1;Name=AEF85167.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00595;gbkey=CDS;gene=priA;product=primosomal protein N';protein_id=AEF85167.1;transl_table=11 CP001843.1 Genbank gene 1580126 1580998 . - . ID=gene1481;Name=TREPR_2604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2604 CP001843.1 Genbank CDS 1580126 1580998 . - 0 ID=cds1411;Parent=gene1481;Dbxref=NCBI_GP:AEF84206.1;Name=AEF84206.1;Note=identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00758;gbkey=CDS;product=DNA polymerase domain protein;protein_id=AEF84206.1;transl_table=11 CP001843.1 Genbank gene 1581042 1581509 . - . ID=gene1482;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=TREPR_2603 CP001843.1 Genbank CDS 1581042 1581509 . - 0 ID=cds1412;Parent=gene1482;Dbxref=NCBI_GP:AEF86033.1;Name=AEF86033.1;Note=identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR00244;gbkey=CDS;gene=nrdR;product=transcriptional regulator NrdR;protein_id=AEF86033.1;transl_table=11 CP001843.1 Genbank gene 1581690 1582823 . + . ID=gene1483;Name=TREPR_2602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2602 CP001843.1 Genbank CDS 1581690 1582823 . + 0 ID=cds1413;Parent=gene1483;Dbxref=NCBI_GP:AEF85009.1;Name=AEF85009.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=putative mannosyltransferase;protein_id=AEF85009.1;transl_table=11 CP001843.1 Genbank gene 1582827 1585316 . - . ID=gene1484;Name=lon_2;gbkey=Gene;gene=lon_2;gene_biotype=protein_coding;locus_tag=TREPR_2601 CP001843.1 Genbank CDS 1582827 1585316 . - 0 ID=cds1414;Parent=gene1484;Dbxref=NCBI_GP:AEF85536.1;Name=AEF85536.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763;gbkey=CDS;gene=lon_2;product=endopeptidase La;protein_id=AEF85536.1;transl_table=11 CP001843.1 Genbank gene 1585324 1586577 . - . ID=gene1485;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=TREPR_2600 CP001843.1 Genbank CDS 1585324 1586577 . - 0 ID=cds1415;Parent=gene1485;Dbxref=NCBI_GP:AEF84456.1;Name=AEF84456.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease%2C ATP-binding subunit ClpX;protein_id=AEF84456.1;transl_table=11 CP001843.1 Genbank gene 1586561 1587175 . - . ID=gene1486;Name=clpP_1;gbkey=Gene;gene=clpP_1;gene_biotype=protein_coding;locus_tag=TREPR_2599 CP001843.1 Genbank CDS 1586561 1587175 . - 0 ID=cds1416;Parent=gene1486;Dbxref=NCBI_GP:AEF86655.1;Name=AEF86655.1;Note=identified by match to protein family HMM PF00574;gbkey=CDS;gene=clpP_1;product=Clp protease;protein_id=AEF86655.1;transl_table=11 CP001843.1 Genbank gene 1587188 1588549 . - . ID=gene1487;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=TREPR_2598 CP001843.1 Genbank CDS 1587188 1588549 . - 0 ID=cds1417;Parent=gene1487;Dbxref=NCBI_GP:AEF85937.1;Name=AEF85937.1;Note=identified by match to protein family HMM PF00254%3B match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115;gbkey=CDS;gene=tig;product=trigger factor;protein_id=AEF85937.1;transl_table=11 CP001843.1 Genbank gene 1589043 1589114 . - . ID=gene1488;Name=TREPR_3934;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3934 CP001843.1 Genbank tRNA 1589043 1589114 . - . ID=rna28;Parent=gene1488;gbkey=tRNA;product=tRNA-Gly CP001843.1 Genbank exon 1589043 1589114 . - . ID=id33;Parent=rna28;gbkey=tRNA;product=tRNA-Gly CP001843.1 Genbank gene 1590344 1592476 . + . ID=gene1489;Name=TREPR_2594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2594 CP001843.1 Genbank CDS 1590344 1592476 . + 0 ID=cds1418;Parent=gene1489;Dbxref=NCBI_GP:AEF83700.1;Name=AEF83700.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83700.1;transl_table=11 CP001843.1 Genbank gene 1592674 1592817 . + . ID=gene1490;Name=TREPR_2593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2593 CP001843.1 Genbank CDS 1592674 1592817 . + 0 ID=cds1419;Parent=gene1490;Dbxref=NCBI_GP:AEF86365.1;Name=AEF86365.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86365.1;transl_table=11 CP001843.1 Genbank gene 1592932 1593168 . + . ID=gene1491;Name=TREPR_2592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2592 CP001843.1 Genbank CDS 1592932 1593168 . + 0 ID=cds1420;Parent=gene1491;Dbxref=NCBI_GP:AEF86557.1;Name=AEF86557.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86557.1;transl_table=11 CP001843.1 Genbank gene 1593161 1593586 . + . ID=gene1492;Name=TREPR_2591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2591 CP001843.1 Genbank CDS 1593161 1593586 . + 0 ID=cds1421;Parent=gene1492;Dbxref=NCBI_GP:AEF85332.1;Name=AEF85332.1;gbkey=CDS;product=coiled-coil domain protein;protein_id=AEF85332.1;transl_table=11 CP001843.1 Genbank gene 1593849 1594610 . - . ID=gene1493;Name=TREPR_2590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2590 CP001843.1 Genbank CDS 1593849 1594610 . - 0 ID=cds1422;Parent=gene1493;Dbxref=NCBI_GP:AEF84693.1;Name=AEF84693.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84693.1;transl_table=11 CP001843.1 Genbank gene 1594624 1596099 . - . ID=gene1494;Name=TREPR_2589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2589 CP001843.1 Genbank CDS 1594624 1596099 . - 0 ID=cds1423;Parent=gene1494;Dbxref=NCBI_GP:AEF85745.1;Name=AEF85745.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;product=site-specific recombinase%2C phage integrase family;protein_id=AEF85745.1;transl_table=11 CP001843.1 Genbank gene 1596318 1596398 . - . ID=gene1495;Name=TREPR_3933;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3933 CP001843.1 Genbank tRNA 1596318 1596398 . - . ID=rna29;Parent=gene1495;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank exon 1596318 1596398 . - . ID=id34;Parent=rna29;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank gene 1597005 1597076 . - . ID=gene1496;Name=TREPR_3932;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3932 CP001843.1 Genbank tRNA 1597005 1597076 . - . ID=rna30;Parent=gene1496;gbkey=tRNA;product=tRNA-Gly CP001843.1 Genbank exon 1597005 1597076 . - . ID=id35;Parent=rna30;gbkey=tRNA;product=tRNA-Gly CP001843.1 Genbank gene 1597112 1597184 . - . ID=gene1497;Name=TREPR_3931;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3931 CP001843.1 Genbank tRNA 1597112 1597184 . - . ID=rna31;Parent=gene1497;gbkey=tRNA;product=tRNA-Lys CP001843.1 Genbank exon 1597112 1597184 . - . ID=id36;Parent=rna31;gbkey=tRNA;product=tRNA-Lys CP001843.1 Genbank gene 1597601 1597674 . - . ID=gene1498;Name=TREPR_3930;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3930 CP001843.1 Genbank tRNA 1597601 1597674 . - . ID=rna32;Parent=gene1498;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank exon 1597601 1597674 . - . ID=id37;Parent=rna32;gbkey=tRNA;product=tRNA-Arg CP001843.1 Genbank gene 1597814 1598227 . - . ID=gene1499;Name=TREPR_2584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2584 CP001843.1 Genbank CDS 1597814 1598227 . - 0 ID=cds1424;Parent=gene1499;Dbxref=NCBI_GP:AEF85656.1;Name=AEF85656.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85656.1;transl_table=11 CP001843.1 Genbank gene 1598202 1598336 . + . ID=gene1500;Name=TREPR_2583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2583 CP001843.1 Genbank CDS 1598202 1598336 . + 0 ID=cds1425;Parent=gene1500;Dbxref=NCBI_GP:AEF84262.1;Name=AEF84262.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84262.1;transl_table=11 CP001843.1 Genbank gene 1598551 1601478 . + . ID=gene1501;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=TREPR_2582 CP001843.1 Genbank CDS 1598551 1601478 . + 0 ID=cds1426;Parent=gene1501;Dbxref=NCBI_GP:AEF84942.1;Name=AEF84942.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630;gbkey=CDS;gene=uvrA;product=excinuclease ABC%2C A subunit;protein_id=AEF84942.1;transl_table=11 CP001843.1 Genbank pseudogene 1601475 1604993 . + . ID=gene1502;Name=TREPR_2581;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2581;pseudo=true CP001843.1 Genbank gene 1605225 1607132 . + . ID=gene1503;Name=TREPR_2580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2580 CP001843.1 Genbank CDS 1605225 1607132 . + 0 ID=cds1427;Parent=gene1503;Dbxref=NCBI_GP:AEF85975.1;Name=AEF85975.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF07497%3B match to protein family HMM PF07498%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00767;gbkey=CDS;product=transcription termination factor rho (ATP-dependenthelicase rho);protein_id=AEF85975.1;transl_table=11 CP001843.1 Genbank gene 1607189 1607392 . + . ID=gene1504;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=TREPR_2579 CP001843.1 Genbank CDS 1607189 1607392 . + 0 ID=cds1428;Parent=gene1504;Dbxref=NCBI_GP:AEF86487.1;Name=AEF86487.1;Note=identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105;gbkey=CDS;gene=rpmE;product=ribosomal protein L31;protein_id=AEF86487.1;transl_table=11 CP001843.1 Genbank gene 1608181 1608327 . - . ID=gene1505;Name=TREPR_2577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2577 CP001843.1 Genbank CDS 1608181 1608327 . - 0 ID=cds1429;Parent=gene1505;Dbxref=NCBI_GP:AEF83777.1;Name=AEF83777.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83777.1;transl_table=11 CP001843.1 Genbank gene 1608284 1608748 . + . ID=gene1506;Name=TREPR_2576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2576 CP001843.1 Genbank CDS 1608284 1608748 . + 0 ID=cds1430;Parent=gene1506;Dbxref=NCBI_GP:AEF83866.1;Name=AEF83866.1;Note=identified by match to protein family HMM PF02381;gbkey=CDS;product=protein MraZ;protein_id=AEF83866.1;transl_table=11 CP001843.1 Genbank gene 1608756 1609706 . + . ID=gene1507;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=TREPR_2575 CP001843.1 Genbank CDS 1608756 1609706 . + 0 ID=cds1431;Parent=gene1507;Dbxref=NCBI_GP:AEF86643.1;Name=AEF86643.1;Note=identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006;gbkey=CDS;gene=mraW;product=S-adenosyl-methyltransferase MraW;protein_id=AEF86643.1;transl_table=11 CP001843.1 Genbank gene 1609703 1609996 . + . ID=gene1508;Name=TREPR_2574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2574 CP001843.1 Genbank CDS 1609703 1609996 . + 0 ID=cds1432;Parent=gene1508;Dbxref=NCBI_GP:AEF85816.1;Name=AEF85816.1;gbkey=CDS;product=putative cell division protein FtsL;protein_id=AEF85816.1;transl_table=11 CP001843.1 Genbank gene 1610142 1611221 . + . ID=gene1509;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=TREPR_2573 CP001843.1 Genbank CDS 1610142 1611221 . + 0 ID=cds1433;Parent=gene1509;Dbxref=NCBI_GP:AEF85585.1;Name=AEF85585.1;Note=identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=AEF85585.1;transl_table=11 CP001843.1 Genbank gene 1611221 1612354 . + . ID=gene1510;Name=TREPR_2572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2572 CP001843.1 Genbank CDS 1611221 1612354 . + 0 ID=cds1434;Parent=gene1510;Dbxref=NCBI_GP:AEF84097.1;Name=AEF84097.1;Note=identified by match to protein family HMM PF01098;gbkey=CDS;product=stage V sporulation protein E;protein_id=AEF84097.1;transl_table=11 CP001843.1 Genbank gene 1612347 1613168 . + . ID=gene1511;Name=TREPR_2571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2571 CP001843.1 Genbank CDS 1612347 1613168 . + 0 ID=cds1435;Parent=gene1511;Dbxref=NCBI_GP:AEF83606.1;Name=AEF83606.1;Note=identified by match to protein family HMM PF08478;gbkey=CDS;product=putative cell division protein FtsQ;protein_id=AEF83606.1;transl_table=11 CP001843.1 Genbank gene 1613161 1614429 . + . ID=gene1512;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=TREPR_2570 CP001843.1 Genbank CDS 1613161 1614429 . + 0 ID=cds1436;Parent=gene1512;Dbxref=NCBI_GP:AEF86525.1;Name=AEF86525.1;Note=identified by match to protein family HMM PF02491%3B match to protein family HMM TIGR01174;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=AEF86525.1;transl_table=11 CP001843.1 Genbank gene 1614530 1615741 . + . ID=gene1513;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=TREPR_2569 CP001843.1 Genbank CDS 1614530 1615741 . + 0 ID=cds1437;Parent=gene1513;Dbxref=NCBI_GP:AEF85881.1;Name=AEF85881.1;Note=identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065;gbkey=CDS;gene=ftsZ;product=cell division protein FtsZ;protein_id=AEF85881.1;transl_table=11 CP001843.1 Genbank gene 1615757 1616656 . + . ID=gene1514;Name=TREPR_2568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2568 CP001843.1 Genbank CDS 1615757 1616656 . + 0 ID=cds1438;Parent=gene1514;Dbxref=NCBI_GP:AEF85172.1;Name=AEF85172.1;Note=identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899;gbkey=CDS;product=integrase/recombinase XerD;protein_id=AEF85172.1;transl_table=11 CP001843.1 Genbank gene 1616664 1617410 . + . ID=gene1515;Name=TREPR_2567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2567 CP001843.1 Genbank CDS 1616664 1617410 . + 0 ID=cds1439;Parent=gene1515;Dbxref=NCBI_GP:AEF83841.1;Name=AEF83841.1;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF83841.1;transl_table=11 CP001843.1 Genbank gene 1617403 1618383 . + . ID=gene1516;Name=TREPR_2566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2566 CP001843.1 Genbank CDS 1617403 1618383 . + 0 ID=cds1440;Parent=gene1516;Dbxref=NCBI_GP:AEF85212.1;Name=AEF85212.1;Note=identified by match to protein family HMM PF02481%3B match to protein family HMM TIGR00732;gbkey=CDS;product=smf protein;protein_id=AEF85212.1;transl_table=11 CP001843.1 Genbank gene 1618390 1620558 . + . ID=gene1517;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=TREPR_2565 CP001843.1 Genbank CDS 1618390 1620558 . + 0 ID=cds1441;Parent=gene1517;Dbxref=NCBI_GP:AEF84220.1;Name=AEF84220.1;Note=identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051;gbkey=CDS;gene=topA;product=DNA topoisomerase;protein_id=AEF84220.1;transl_table=11 CP001843.1 Genbank gene 1620548 1621516 . + . ID=gene1518;Name=TREPR_2564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2564 CP001843.1 Genbank CDS 1620548 1621516 . + 0 ID=cds1442;Parent=gene1518;Dbxref=NCBI_GP:AEF86775.1;Name=AEF86775.1;Note=identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899;gbkey=CDS;product=site-specific recombinase%2C phage integrase family;protein_id=AEF86775.1;transl_table=11 CP001843.1 Genbank gene 1621513 1622085 . + . ID=gene1519;Name=TREPR_2563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2563 CP001843.1 Genbank CDS 1621513 1622085 . + 0 ID=cds1443;Parent=gene1519;Dbxref=NCBI_GP:AEF85734.1;Name=AEF85734.1;Note=identified by match to protein family HMM PF00227;gbkey=CDS;product=ATP-dependent protease HslV;protein_id=AEF85734.1;transl_table=11 CP001843.1 Genbank gene 1622085 1623665 . + . ID=gene1520;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=TREPR_2562 CP001843.1 Genbank CDS 1622085 1623665 . + 0 ID=cds1444;Parent=gene1520;Dbxref=NCBI_GP:AEF84794.1;Name=AEF84794.1;Note=identified by match to protein family HMM PF07724%3B match to protein family HMM TIGR00390;gbkey=CDS;gene=hslU;product=heat shock protein HslVU%2C ATPase subunit HslU;protein_id=AEF84794.1;transl_table=11 CP001843.1 Genbank gene 1623718 1624134 . + . ID=gene1521;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=TREPR_2561 CP001843.1 Genbank CDS 1623718 1624134 . + 0 ID=cds1445;Parent=gene1521;Dbxref=NCBI_GP:AEF83891.1;Name=AEF83891.1;Note=identified by match to protein family HMM TIGR01396;gbkey=CDS;gene=flgB;product=flagellar basal-body rod protein FlgB;protein_id=AEF83891.1;transl_table=11 CP001843.1 Genbank gene 1624146 1624604 . + . ID=gene1522;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=TREPR_2560 CP001843.1 Genbank CDS 1624146 1624604 . + 0 ID=cds1446;Parent=gene1522;Dbxref=NCBI_GP:AEF86182.1;Name=AEF86182.1;Note=identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR01395;gbkey=CDS;gene=flgC;product=flagellar basal-body rod protein FlgC;protein_id=AEF86182.1;transl_table=11 CP001843.1 Genbank gene 1624624 1625022 . + . ID=gene1523;Name=TREPR_2559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2559 CP001843.1 Genbank CDS 1624624 1625022 . + 0 ID=cds1447;Parent=gene1523;Dbxref=NCBI_GP:AEF85105.1;Name=AEF85105.1;gbkey=CDS;product=flagellar hook-basal body complex protein FliE;protein_id=AEF85105.1;transl_table=11 CP001843.1 Genbank gene 1625121 1626827 . + . ID=gene1524;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=TREPR_2558 CP001843.1 Genbank CDS 1625121 1626827 . + 0 ID=cds1448;Parent=gene1524;Dbxref=NCBI_GP:AEF84552.1;Name=AEF84552.1;Note=identified by match to protein family HMM PF01514%3B match to protein family HMM PF08345%3B match to protein family HMM TIGR00206;gbkey=CDS;gene=fliF;product=flagellar M-ring protein FliF;protein_id=AEF84552.1;transl_table=11 CP001843.1 Genbank gene 1626831 1627889 . + . ID=gene1525;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=TREPR_2557 CP001843.1 Genbank CDS 1626831 1627889 . + 0 ID=cds1449;Parent=gene1525;Dbxref=NCBI_GP:AEF86813.1;Name=AEF86813.1;Note=identified by match to protein family HMM PF01706%3B match to protein family HMM TIGR00207;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=AEF86813.1;transl_table=11 CP001843.1 Genbank gene 1627886 1628923 . + . ID=gene1526;Name=TREPR_2556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2556 CP001843.1 Genbank CDS 1627886 1628923 . + 0 ID=cds1450;Parent=gene1526;Dbxref=NCBI_GP:AEF85515.1;Name=AEF85515.1;Note=identified by match to protein family HMM PF02108;gbkey=CDS;product=flagellar assembly protein;protein_id=AEF85515.1;transl_table=11 CP001843.1 Genbank gene 1628932 1630281 . + . ID=gene1527;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=TREPR_2555 CP001843.1 Genbank CDS 1628932 1630281 . + 0 ID=cds1451;Parent=gene1527;Dbxref=NCBI_GP:AEF86514.1;Name=AEF86514.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01026%3B match to protein family HMM TIGR03496;gbkey=CDS;gene=fliI;product=flagellar protein export ATPase FliI;protein_id=AEF86514.1;transl_table=11 CP001843.1 Genbank gene 1630278 1630736 . + . ID=gene1528;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=TREPR_2554 CP001843.1 Genbank CDS 1630278 1630736 . + 0 ID=cds1452;Parent=gene1528;Dbxref=NCBI_GP:AEF84027.1;Name=AEF84027.1;Note=identified by match to protein family HMM TIGR02473;gbkey=CDS;gene=fliJ;product=flagellar export protein FliJ;protein_id=AEF84027.1;transl_table=11 CP001843.1 Genbank gene 1630769 1631791 . + . ID=gene1529;Name=TREPR_2553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2553 CP001843.1 Genbank CDS 1630769 1631791 . + 0 ID=cds1453;Parent=gene1529;Dbxref=NCBI_GP:AEF85054.1;Name=AEF85054.1;gbkey=CDS;product=putative sulfonate/nitrate transport system substrate-binding protein;protein_id=AEF85054.1;transl_table=11 CP001843.1 Genbank gene 1631781 1632533 . + . ID=gene1530;Name=TREPR_2552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2552 CP001843.1 Genbank CDS 1631781 1632533 . + 0 ID=cds1454;Parent=gene1530;Dbxref=NCBI_GP:AEF86052.1;Name=AEF86052.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=putative ABC transporter%2C permease protein;protein_id=AEF86052.1;transl_table=11 CP001843.1 Genbank gene 1632530 1633249 . + . ID=gene1531;Name=TREPR_2551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2551 CP001843.1 Genbank CDS 1632530 1633249 . + 0 ID=cds1455;Parent=gene1531;Dbxref=NCBI_GP:AEF85281.1;Name=AEF85281.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=aliphatic sulfonates import ATP-binding protein SsuB 1;protein_id=AEF85281.1;transl_table=11 CP001843.1 Genbank gene 1633393 1634715 . - . ID=gene1532;Name=TREPR_2550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2550 CP001843.1 Genbank CDS 1633393 1634715 . - 0 ID=cds1456;Parent=gene1532;Dbxref=NCBI_GP:AEF84459.1;Name=AEF84459.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84459.1;transl_table=11 CP001843.1 Genbank gene 1634715 1635488 . - . ID=gene1533;Name=TREPR_2549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2549 CP001843.1 Genbank CDS 1634715 1635488 . - 0 ID=cds1457;Parent=gene1533;Dbxref=NCBI_GP:AEF83638.1;Name=AEF83638.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83638.1;transl_table=11 CP001843.1 Genbank gene 1635488 1636792 . - . ID=gene1534;Name=TREPR_2548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2548 CP001843.1 Genbank CDS 1635488 1636792 . - 0 ID=cds1458;Parent=gene1534;Dbxref=NCBI_GP:AEF84495.1;Name=AEF84495.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=efflux ABC transporter%2C permease protein;protein_id=AEF84495.1;transl_table=11 CP001843.1 Genbank pseudogene 1636795 1638243 . - . ID=gene1535;Name=TREPR_2547;Note=efflux ABC transporter%2C permease protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2547;pseudo=true CP001843.1 Genbank gene 1638240 1638923 . - . ID=gene1536;Name=TREPR_2546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2546 CP001843.1 Genbank CDS 1638240 1638923 . - 0 ID=cds1459;Parent=gene1536;Dbxref=NCBI_GP:AEF84820.1;Name=AEF84820.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=macrolide export ATP-binding/permease protein MacB;protein_id=AEF84820.1;transl_table=11 CP001843.1 Genbank gene 1638936 1640303 . - . ID=gene1537;Name=TREPR_2545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2545 CP001843.1 Genbank CDS 1638936 1640303 . - 0 ID=cds1460;Parent=gene1537;Dbxref=NCBI_GP:AEF85327.1;Name=AEF85327.1;Note=identified by match to protein family HMM PF02397%3B match to protein family HMM TIGR03025;gbkey=CDS;product=sugar transferase;protein_id=AEF85327.1;transl_table=11 CP001843.1 Genbank gene 1640313 1642316 . - . ID=gene1538;Name=TREPR_2544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2544 CP001843.1 Genbank CDS 1640313 1642316 . - 0 ID=cds1461;Parent=gene1538;Dbxref=NCBI_GP:AEF86303.1;Name=AEF86303.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM PF08218%3B match to protein family HMM TIGR00125;gbkey=CDS;product=citrate lyase ligase C- domain protein;protein_id=AEF86303.1;transl_table=11 CP001843.1 Genbank gene 1642333 1644342 . - . ID=gene1539;Name=TREPR_2543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2543 CP001843.1 Genbank CDS 1642333 1644342 . - 0 ID=cds1462;Parent=gene1539;Dbxref=NCBI_GP:AEF83795.1;Name=AEF83795.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM PF08218%3B match to protein family HMM TIGR00125;gbkey=CDS;product=citrate lyase ligase C- domain protein;protein_id=AEF83795.1;transl_table=11 CP001843.1 Genbank gene 1644359 1646401 . - . ID=gene1540;Name=TREPR_2542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2542 CP001843.1 Genbank CDS 1644359 1646401 . - 0 ID=cds1463;Parent=gene1540;Dbxref=NCBI_GP:AEF84754.1;Name=AEF84754.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM PF08218%3B match to protein family HMM TIGR00125;gbkey=CDS;product=citrate lyase ligase C- domain protein;protein_id=AEF84754.1;transl_table=11 CP001843.1 Genbank gene 1646418 1648454 . - . ID=gene1541;Name=TREPR_2541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2541 CP001843.1 Genbank CDS 1646418 1648454 . - 0 ID=cds1464;Parent=gene1541;Dbxref=NCBI_GP:AEF83889.1;Name=AEF83889.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM PF08218%3B match to protein family HMM TIGR00125;gbkey=CDS;product=citrate lyase ligase C- domain protein;protein_id=AEF83889.1;transl_table=11 CP001843.1 Genbank gene 1648485 1651403 . - . ID=gene1542;Name=TREPR_2540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2540 CP001843.1 Genbank CDS 1648485 1651403 . - 0 ID=cds1465;Parent=gene1542;Dbxref=NCBI_GP:AEF84645.1;Name=AEF84645.1;Note=identified by match to protein family HMM PF02776;gbkey=CDS;product=2-oxoglutarate decarboxylase;protein_id=AEF84645.1;transl_table=11 CP001843.1 Genbank gene 1651396 1653180 . - . ID=gene1543;Name=TREPR_2539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2539 CP001843.1 Genbank CDS 1651396 1653180 . - 0 ID=cds1466;Parent=gene1543;Dbxref=NCBI_GP:AEF84972.1;Name=AEF84972.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84972.1;transl_table=11 CP001843.1 Genbank gene 1653177 1653947 . - . ID=gene1544;Name=TREPR_2538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2538 CP001843.1 Genbank CDS 1653177 1653947 . - 0 ID=cds1467;Parent=gene1544;Dbxref=NCBI_GP:AEF86126.1;Name=AEF86126.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=teichoic acids export ATP-binding protein TagH (Teichoicacid-transporting ATPase);protein_id=AEF86126.1;transl_table=11 CP001843.1 Genbank gene 1653948 1654724 . - . ID=gene1545;Name=TREPR_2537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2537 CP001843.1 Genbank CDS 1653948 1654724 . - 0 ID=cds1468;Parent=gene1545;Dbxref=NCBI_GP:AEF86825.1;Name=AEF86825.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;product=O-antigen export system permease protein RfbA;protein_id=AEF86825.1;transl_table=11 CP001843.1 Genbank gene 1654731 1656320 . - . ID=gene1546;Name=TREPR_2536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2536 CP001843.1 Genbank CDS 1654731 1656320 . - 0 ID=cds1469;Parent=gene1546;Dbxref=NCBI_GP:AEF85579.1;Name=AEF85579.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85579.1;transl_table=11 CP001843.1 Genbank gene 1656327 1657085 . - . ID=gene1547;Name=TREPR_2535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2535 CP001843.1 Genbank CDS 1656327 1657085 . - 0 ID=cds1470;Parent=gene1547;Dbxref=NCBI_GP:AEF84306.1;Name=AEF84306.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase;protein_id=AEF84306.1;transl_table=11 CP001843.1 Genbank gene 1657096 1658076 . - . ID=gene1548;Name=TREPR_2534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2534 CP001843.1 Genbank CDS 1657096 1658076 . - 0 ID=cds1471;Parent=gene1548;Dbxref=NCBI_GP:AEF86711.1;Name=AEF86711.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C family 2;protein_id=AEF86711.1;transl_table=11 CP001843.1 Genbank gene 1658073 1659188 . - . ID=gene1549;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=TREPR_2533 CP001843.1 Genbank CDS 1658073 1659188 . - 0 ID=cds1472;Parent=gene1549;Dbxref=NCBI_GP:AEF86867.1;Name=AEF86867.1;Note=identified by match to protein family HMM PF03275%3B match to protein family HMM TIGR00031;gbkey=CDS;gene=glf;product=UDP-galactopyranose mutase;protein_id=AEF86867.1;transl_table=11 CP001843.1 Genbank gene 1659624 1659818 . + . ID=gene1550;Name=TREPR_2532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2532 CP001843.1 Genbank CDS 1659624 1659818 . + 0 ID=cds1473;Parent=gene1550;Dbxref=NCBI_GP:AEF85288.1;Name=AEF85288.1;gbkey=CDS;product=conserved domain protein;protein_id=AEF85288.1;transl_table=11 CP001843.1 Genbank gene 1659852 1660850 . + . ID=gene1551;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=TREPR_2531 CP001843.1 Genbank CDS 1659852 1660850 . + 0 ID=cds1474;Parent=gene1551;Dbxref=NCBI_GP:AEF85255.1;Name=AEF85255.1;Note=identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174;gbkey=CDS;gene=miaA;product=tRNA isopentenyltransferase;protein_id=AEF85255.1;transl_table=11 CP001843.1 Genbank gene 1661743 1662159 . + . ID=gene1552;Name=TREPR_2529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2529 CP001843.1 Genbank CDS 1661743 1662159 . + 0 ID=cds1475;Parent=gene1552;Dbxref=NCBI_GP:AEF85181.1;Name=AEF85181.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85181.1;transl_table=11 CP001843.1 Genbank gene 1662259 1665489 . + . ID=gene1553;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=TREPR_2528 CP001843.1 Genbank CDS 1662259 1665489 . + 0 ID=cds1476;Parent=gene1553;Dbxref=NCBI_GP:AEF84375.1;Name=AEF84375.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=AEF84375.1;transl_table=11 CP001843.1 Genbank gene 1665492 1666439 . + . ID=gene1554;Name=TREPR_2527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2527 CP001843.1 Genbank CDS 1665492 1666439 . + 0 ID=cds1477;Parent=gene1554;Dbxref=NCBI_GP:AEF83818.1;Name=AEF83818.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83818.1;transl_table=11 CP001843.1 Genbank gene 1666457 1666747 . + . ID=gene1555;Name=TREPR_2526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2526 CP001843.1 Genbank CDS 1666457 1666747 . + 0 ID=cds1478;Parent=gene1555;Dbxref=NCBI_GP:AEF83890.1;Name=AEF83890.1;Note=identified by match to protein family HMM PF09723%3B match to protein family HMM TIGR02605;gbkey=CDS;product=type I antifreeze protein;protein_id=AEF83890.1;transl_table=11 CP001843.1 Genbank gene 1666757 1667065 . + . ID=gene1556;Name=TREPR_2525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2525 CP001843.1 Genbank CDS 1666757 1667065 . + 0 ID=cds1479;Parent=gene1556;Dbxref=NCBI_GP:AEF85727.1;Name=AEF85727.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85727.1;transl_table=11 CP001843.1 Genbank gene 1667129 1672678 . + . ID=gene1557;Name=TREPR_2524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2524 CP001843.1 Genbank CDS 1667129 1672678 . + 0 ID=cds1480;Parent=gene1557;Dbxref=NCBI_GP:AEF86483.1;Name=AEF86483.1;Note=identified by match to protein family HMM PF01835%3B match to protein family HMM PF07703;gbkey=CDS;product=alpha-2-macroglobulin domain protein;protein_id=AEF86483.1;transl_table=11 CP001843.1 Genbank gene 1672687 1675242 . + . ID=gene1558;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=TREPR_2523 CP001843.1 Genbank CDS 1672687 1675242 . + 0 ID=cds1481;Parent=gene1558;Dbxref=NCBI_GP:AEF83630.1;Name=AEF83630.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM PF06832%3B match to protein family HMM TIGR02073;gbkey=CDS;gene=pbpC;product=penicillin-binding protein 1C;protein_id=AEF83630.1;transl_table=11 CP001843.1 Genbank gene 1675389 1677158 . + . ID=gene1559;Name=TREPR_2522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2522 CP001843.1 Genbank CDS 1675389 1677158 . + 0 ID=cds1482;Parent=gene1559;Dbxref=NCBI_GP:AEF84588.1;Name=AEF84588.1;gbkey=CDS;product=putative outer membrane protein;protein_id=AEF84588.1;transl_table=11 CP001843.1 Genbank gene 1677244 1678263 . - . ID=gene1560;Name=TREPR_2521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2521 CP001843.1 Genbank CDS 1677244 1678263 . - 0 ID=cds1483;Parent=gene1560;Dbxref=NCBI_GP:AEF84166.1;Name=AEF84166.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF84166.1;transl_table=11 CP001843.1 Genbank gene 1678260 1678637 . - . ID=gene1561;Name=TREPR_2520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2520 CP001843.1 Genbank CDS 1678260 1678637 . - 0 ID=cds1484;Parent=gene1561;Dbxref=NCBI_GP:AEF85188.1;Name=AEF85188.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85188.1;transl_table=11 CP001843.1 Genbank gene 1678667 1679566 . + . ID=gene1562;Name=TREPR_2518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2518 CP001843.1 Genbank CDS 1678667 1679566 . + 0 ID=cds1485;Parent=gene1562;Dbxref=NCBI_GP:AEF86724.1;Name=AEF86724.1;Note=identified by match to protein family HMM PF00293%3B match to protein family HMM PF09297;gbkey=CDS;product=NAD(+) diphosphatase;protein_id=AEF86724.1;transl_table=11 CP001843.1 Genbank gene 1679563 1679913 . - . ID=gene1563;Name=TREPR_2519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2519 CP001843.1 Genbank CDS 1679563 1679913 . - 0 ID=cds1486;Parent=gene1563;Dbxref=NCBI_GP:AEF85521.1;Name=AEF85521.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85521.1;transl_table=11 CP001843.1 Genbank gene 1679964 1681013 . - . ID=gene1564;Name=TREPR_2517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2517 CP001843.1 Genbank CDS 1679964 1681013 . - 0 ID=cds1487;Parent=gene1564;Dbxref=NCBI_GP:AEF84470.1;Name=AEF84470.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF84470.1;transl_table=11 CP001843.1 Genbank gene 1681043 1682023 . - . ID=gene1565;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=TREPR_2516 CP001843.1 Genbank CDS 1681043 1682023 . - 0 ID=cds1488;Parent=gene1565;Dbxref=NCBI_GP:AEF84192.1;Name=AEF84192.1;Note=identified by match to protein family HMM PF01145%3B match to protein family HMM TIGR01932;gbkey=CDS;gene=hflC;product=HflC protein;protein_id=AEF84192.1;transl_table=11 CP001843.1 Genbank gene 1682023 1682994 . - . ID=gene1566;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=TREPR_2515 CP001843.1 Genbank CDS 1682023 1682994 . - 0 ID=cds1489;Parent=gene1566;Dbxref=NCBI_GP:AEF86984.1;Name=AEF86984.1;Note=identified by match to protein family HMM PF01145%3B match to protein family HMM TIGR01933;gbkey=CDS;gene=hflK;product=HflK protein;protein_id=AEF86984.1;transl_table=11 CP001843.1 Genbank gene 1683181 1684755 . - . ID=gene1567;Name=TREPR_2514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2514 CP001843.1 Genbank CDS 1683181 1684755 . - 0 ID=cds1490;Parent=gene1567;Dbxref=NCBI_GP:AEF85390.1;Name=AEF85390.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85390.1;transl_table=11 CP001843.1 Genbank gene 1684868 1687237 . - . ID=gene1568;Name=TREPR_2513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2513 CP001843.1 Genbank CDS 1684868 1687237 . - 0 ID=cds1491;Parent=gene1568;Dbxref=NCBI_GP:AEF83582.1;Name=AEF83582.1;Note=identified by match to protein family HMM PF00759;gbkey=CDS;product=glycosyl hydrolase%2C family 9;protein_id=AEF83582.1;transl_table=11 CP001843.1 Genbank gene 1687247 1687708 . - . ID=gene1569;Name=TREPR_2512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2512 CP001843.1 Genbank CDS 1687247 1687708 . - 0 ID=cds1492;Parent=gene1569;Dbxref=NCBI_GP:AEF84354.1;Name=AEF84354.1;Note=identified by match to protein family HMM PF01042;gbkey=CDS;product=endoribonuclease L-PSP;protein_id=AEF84354.1;transl_table=11 CP001843.1 Genbank gene 1687745 1689349 . - . ID=gene1570;Name=TREPR_2511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2511 CP001843.1 Genbank CDS 1687745 1689349 . - 0 ID=cds1493;Parent=gene1570;Dbxref=NCBI_GP:AEF86852.1;Name=AEF86852.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07908%3B match to protein family HMM PF07969;gbkey=CDS;product=N-acyl-D-aspartate deacylase;protein_id=AEF86852.1;transl_table=11 CP001843.1 Genbank gene 1689354 1690469 . - . ID=gene1571;Name=TREPR_2510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2510 CP001843.1 Genbank CDS 1689354 1690469 . - 0 ID=cds1494;Parent=gene1571;Dbxref=NCBI_GP:AEF85877.1;Name=AEF85877.1;Note=identified by match to protein family HMM PF01168;gbkey=CDS;product=alanine racemase domain protein;protein_id=AEF85877.1;transl_table=11 CP001843.1 Genbank gene 1690473 1691330 . - . ID=gene1572;Name=TREPR_2509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2509 CP001843.1 Genbank CDS 1690473 1691330 . - 0 ID=cds1495;Parent=gene1572;Dbxref=NCBI_GP:AEF84103.1;Name=AEF84103.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF84103.1;transl_table=11 CP001843.1 Genbank gene 1691332 1692267 . - . ID=gene1573;Name=TREPR_2508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2508 CP001843.1 Genbank CDS 1691332 1692267 . - 0 ID=cds1496;Parent=gene1573;Dbxref=NCBI_GP:AEF86696.1;Name=AEF86696.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=sugar ABC transporter permease;protein_id=AEF86696.1;transl_table=11 CP001843.1 Genbank gene 1692348 1693622 . - . ID=gene1574;Name=TREPR_2507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2507 CP001843.1 Genbank CDS 1692348 1693622 . - 0 ID=cds1497;Parent=gene1574;Dbxref=NCBI_GP:AEF85692.1;Name=AEF85692.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative bacterial extracellular solute-binding protein;protein_id=AEF85692.1;transl_table=11 CP001843.1 Genbank gene 1693851 1694534 . + . ID=gene1575;Name=TREPR_2506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2506 CP001843.1 Genbank CDS 1693851 1694534 . + 0 ID=cds1498;Parent=gene1575;Dbxref=NCBI_GP:AEF85431.1;Name=AEF85431.1;Note=identified by match to protein family HMM PF08348;gbkey=CDS;product=YheO domain protein;protein_id=AEF85431.1;transl_table=11 CP001843.1 Genbank gene 1694647 1695573 . + . ID=gene1576;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=TREPR_2505 CP001843.1 Genbank CDS 1694647 1695573 . + 0 ID=cds1499;Parent=gene1576;Dbxref=NCBI_GP:AEF84616.1;Name=AEF84616.1;Note=identified by match to protein family HMM PF00753%3B match to protein family HMM TIGR02651;gbkey=CDS;gene=rnz;product=ribonuclease Z;protein_id=AEF84616.1;transl_table=11 CP001843.1 Genbank gene 1695592 1696623 . + . ID=gene1577;Name=TREPR_2504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2504 CP001843.1 Genbank CDS 1695592 1696623 . + 0 ID=cds1500;Parent=gene1577;Dbxref=NCBI_GP:AEF83851.1;Name=AEF83851.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC-type multidrug transport system%2C ATPase component;protein_id=AEF83851.1;transl_table=11 CP001843.1 Genbank gene 1696620 1697354 . + . ID=gene1578;Name=TREPR_2503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2503 CP001843.1 Genbank CDS 1696620 1697354 . + 0 ID=cds1501;Parent=gene1578;Dbxref=NCBI_GP:AEF83884.1;Name=AEF83884.1;gbkey=CDS;product=ABC transporter permease protein;protein_id=AEF83884.1;transl_table=11 CP001843.1 Genbank gene 1697358 1698983 . + . ID=gene1579;Name=TREPR_2502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2502 CP001843.1 Genbank CDS 1697358 1698983 . + 0 ID=cds1502;Parent=gene1579;Dbxref=NCBI_GP:AEF86625.1;Name=AEF86625.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86625.1;transl_table=11 CP001843.1 Genbank gene 1698973 1699953 . + . ID=gene1580;Name=TREPR_2501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2501 CP001843.1 Genbank CDS 1698973 1699953 . + 0 ID=cds1503;Parent=gene1580;Dbxref=NCBI_GP:AEF85899.1;Name=AEF85899.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85899.1;transl_table=11 CP001843.1 Genbank gene 1699955 1701130 . - . ID=gene1581;Name=TREPR_2500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2500 CP001843.1 Genbank CDS 1699955 1701130 . - 0 ID=cds1504;Parent=gene1581;Dbxref=NCBI_GP:AEF85055.1;Name=AEF85055.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85055.1;transl_table=11 CP001843.1 Genbank gene 1701186 1702097 . + . ID=gene1582;Name=TREPR_2499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2499 CP001843.1 Genbank CDS 1701186 1702097 . + 0 ID=cds1505;Parent=gene1582;Dbxref=NCBI_GP:AEF85122.1;Name=AEF85122.1;Note=identified by match to protein family HMM PF01875;gbkey=CDS;product=protein of unknown function DUF52;protein_id=AEF85122.1;transl_table=11 CP001843.1 Genbank gene 1702108 1703598 . + . ID=gene1583;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=TREPR_2498 CP001843.1 Genbank CDS 1702108 1703598 . + 0 ID=cds1506;Parent=gene1583;Dbxref=NCBI_GP:AEF84351.1;Name=AEF84351.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01312;gbkey=CDS;gene=xylB;product=xylulokinase;protein_id=AEF84351.1;transl_table=11 CP001843.1 Genbank gene 1703641 1704981 . + . ID=gene1584;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=TREPR_2497 CP001843.1 Genbank CDS 1703641 1704981 . + 0 ID=cds1507;Parent=gene1584;Dbxref=NCBI_GP:AEF85442.1;Name=AEF85442.1;Note=identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR02630;gbkey=CDS;gene=xylA;product=xylose isomerase;protein_id=AEF85442.1;transl_table=11 CP001843.1 Genbank gene 1705031 1706710 . - . ID=gene1585;Name=TREPR_2496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2496 CP001843.1 Genbank CDS 1705031 1706710 . - 0 ID=cds1508;Parent=gene1585;Dbxref=NCBI_GP:AEF85977.1;Name=AEF85977.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85977.1;transl_table=11 CP001843.1 Genbank gene 1706703 1708271 . - . ID=gene1586;Name=TREPR_2495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2495 CP001843.1 Genbank CDS 1706703 1708271 . - 0 ID=cds1509;Parent=gene1586;Dbxref=NCBI_GP:AEF86956.1;Name=AEF86956.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86956.1;transl_table=11 CP001843.1 Genbank gene 1708273 1709193 . - . ID=gene1587;Name=TREPR_2494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2494 CP001843.1 Genbank CDS 1708273 1709193 . - 0 ID=cds1510;Parent=gene1587;Dbxref=NCBI_GP:AEF83922.1;Name=AEF83922.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83922.1;transl_table=11 CP001843.1 Genbank gene 1709193 1711295 . - . ID=gene1588;Name=TREPR_2493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2493 CP001843.1 Genbank CDS 1709193 1711295 . - 0 ID=cds1511;Parent=gene1588;Dbxref=NCBI_GP:AEF84527.1;Name=AEF84527.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84527.1;transl_table=11 CP001843.1 Genbank gene 1711462 1711917 . + . ID=gene1589;Name=TREPR_2492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2492 CP001843.1 Genbank CDS 1711462 1711917 . + 0 ID=cds1512;Parent=gene1589;Dbxref=NCBI_GP:AEF85003.1;Name=AEF85003.1;Note=identified by match to protein family HMM PF04977;gbkey=CDS;product=putative septum formation initiator subfamily;protein_id=AEF85003.1;transl_table=11 CP001843.1 Genbank gene 1711933 1712754 . - . ID=gene1590;Name=TREPR_2491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2491 CP001843.1 Genbank CDS 1711933 1712754 . - 0 ID=cds1513;Parent=gene1590;Dbxref=NCBI_GP:AEF86454.1;Name=AEF86454.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86454.1;transl_table=11 CP001843.1 Genbank gene 1712849 1713310 . - . ID=gene1591;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=TREPR_2490 CP001843.1 Genbank CDS 1712849 1713310 . - 0 ID=cds1514;Parent=gene1591;Dbxref=NCBI_GP:AEF86938.1;Name=AEF86938.1;Note=identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=AEF86938.1;transl_table=11 CP001843.1 Genbank gene 1713307 1714875 . - . ID=gene1592;Name=TREPR_2489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2489 CP001843.1 Genbank CDS 1713307 1714875 . - 0 ID=cds1515;Parent=gene1592;Dbxref=NCBI_GP:AEF84000.1;Name=AEF84000.1;Note=identified by match to protein family HMM PF08308;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84000.1;transl_table=11 CP001843.1 Genbank gene 1714881 1715930 . + . ID=gene1593;Name=lepB_1;gbkey=Gene;gene=lepB_1;gene_biotype=protein_coding;locus_tag=TREPR_2488 CP001843.1 Genbank CDS 1714881 1715930 . + 0 ID=cds1516;Parent=gene1593;Dbxref=NCBI_GP:AEF84469.1;Name=AEF84469.1;Note=identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227;gbkey=CDS;gene=lepB_1;product=signal peptidase I;protein_id=AEF84469.1;transl_table=11 CP001843.1 Genbank gene 1715952 1716680 . + . ID=gene1594;Name=lepB_2;gbkey=Gene;gene=lepB_2;gene_biotype=protein_coding;locus_tag=TREPR_2487 CP001843.1 Genbank CDS 1715952 1716680 . + 0 ID=cds1517;Parent=gene1594;Dbxref=NCBI_GP:AEF85467.1;Name=AEF85467.1;Note=identified by match to protein family HMM TIGR02227;gbkey=CDS;gene=lepB_2;product=signal peptidase I;protein_id=AEF85467.1;transl_table=11 CP001843.1 Genbank gene 1716687 1717979 . + . ID=gene1595;Name=TREPR_2485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2485 CP001843.1 Genbank CDS 1716687 1717979 . + 0 ID=cds1518;Parent=gene1595;Dbxref=NCBI_GP:AEF83897.1;Name=AEF83897.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06969;gbkey=CDS;product=HemN C- region family;protein_id=AEF83897.1;transl_table=11 CP001843.1 Genbank gene 1717950 1718135 . - . ID=gene1596;Name=TREPR_2486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2486 CP001843.1 Genbank CDS 1717950 1718135 . - 0 ID=cds1519;Parent=gene1596;Dbxref=NCBI_GP:AEF84619.1;Name=AEF84619.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84619.1;transl_table=11 CP001843.1 Genbank gene 1718390 1720558 . - . ID=gene1597;Name=TREPR_2484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2484 CP001843.1 Genbank CDS 1718390 1720558 . - 0 ID=cds1520;Parent=gene1597;Dbxref=NCBI_GP:AEF86184.1;Name=AEF86184.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86184.1;transl_table=11 CP001843.1 Genbank gene 1720655 1721323 . - . ID=gene1598;Name=TREPR_2483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2483 CP001843.1 Genbank CDS 1720655 1721323 . - 0 ID=cds1521;Parent=gene1598;Dbxref=NCBI_GP:AEF85444.1;Name=AEF85444.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF08281;gbkey=CDS;product=two component transcriptional regulator%2C LuxR family;protein_id=AEF85444.1;transl_table=11 CP001843.1 Genbank gene 1721287 1722033 . - . ID=gene1599;Name=TREPR_2482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2482 CP001843.1 Genbank CDS 1721287 1722033 . - 0 ID=cds1522;Parent=gene1599;Dbxref=NCBI_GP:AEF85241.1;Name=AEF85241.1;Note=identified by match to protein family HMM PF02518;gbkey=CDS;product=two-component system sensor kinase;protein_id=AEF85241.1;transl_table=11 CP001843.1 Genbank gene 1722095 1722823 . + . ID=gene1600;Name=TREPR_2481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2481 CP001843.1 Genbank CDS 1722095 1722823 . + 0 ID=cds1523;Parent=gene1600;Dbxref=NCBI_GP:AEF84443.1;Name=AEF84443.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF84443.1;transl_table=11 CP001843.1 Genbank gene 1722933 1723937 . + . ID=gene1601;Name=TREPR_2479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2479 CP001843.1 Genbank CDS 1722933 1723937 . + 0 ID=cds1524;Parent=gene1601;Dbxref=NCBI_GP:AEF85969.1;Name=AEF85969.1;Note=identified by match to protein family HMM PF09513;gbkey=CDS;product=putative RNA ligase;protein_id=AEF85969.1;transl_table=11 CP001843.1 Genbank gene 1724613 1725620 . + . ID=gene1602;Name=TREPR_2478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2478 CP001843.1 Genbank CDS 1724613 1725620 . + 0 ID=cds1525;Parent=gene1602;Dbxref=NCBI_GP:AEF85763.1;Name=AEF85763.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85763.1;transl_table=11 CP001843.1 Genbank gene 1725704 1726195 . - . ID=gene1603;Name=TREPR_2477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2477 CP001843.1 Genbank CDS 1725704 1726195 . - 0 ID=cds1526;Parent=gene1603;Dbxref=NCBI_GP:AEF84941.1;Name=AEF84941.1;Note=identified by match to protein family HMM PF00383;gbkey=CDS;product=CMP/dCMP deaminase%2C zinc-binding protein;protein_id=AEF84941.1;transl_table=11 CP001843.1 Genbank gene 1726593 1727387 . - . ID=gene1604;Name=TREPR_2476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2476 CP001843.1 Genbank CDS 1726593 1727387 . - 0 ID=cds1527;Parent=gene1604;Dbxref=NCBI_GP:AEF86948.1;Name=AEF86948.1;Note=identified by match to protein family HMM PF01790;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=AEF86948.1;transl_table=11 CP001843.1 Genbank gene 1727849 1728280 . - . ID=gene1605;Name=TREPR_2475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2475 CP001843.1 Genbank CDS 1727849 1728280 . - 0 ID=cds1528;Parent=gene1605;Dbxref=NCBI_GP:AEF85989.1;Name=AEF85989.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85989.1;transl_table=11 CP001843.1 Genbank gene 1728326 1728898 . - . ID=gene1606;Name=TREPR_2474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2474 CP001843.1 Genbank CDS 1728326 1728898 . - 0 ID=cds1529;Parent=gene1606;Dbxref=NCBI_GP:AEF84690.1;Name=AEF84690.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84690.1;transl_table=11 CP001843.1 Genbank gene 1728895 1729044 . - . ID=gene1607;Name=TREPR_2473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2473 CP001843.1 Genbank CDS 1728895 1729044 . - 0 ID=cds1530;Parent=gene1607;Dbxref=NCBI_GP:AEF83723.1;Name=AEF83723.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83723.1;transl_table=11 CP001843.1 Genbank gene 1729111 1729413 . + . ID=gene1608;Name=TREPR_2472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2472 CP001843.1 Genbank CDS 1729111 1729413 . + 0 ID=cds1531;Parent=gene1608;Dbxref=NCBI_GP:AEF84146.1;Name=AEF84146.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=conserved domain protein;protein_id=AEF84146.1;transl_table=11 CP001843.1 Genbank gene 1729727 1730470 . - . ID=gene1609;Name=TREPR_2471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2471 CP001843.1 Genbank CDS 1729727 1730470 . - 0 ID=cds1532;Parent=gene1609;Dbxref=NCBI_GP:AEF85555.1;Name=AEF85555.1;Note=identified by match to protein family HMM PF01928;gbkey=CDS;product=adenylate cyclase;protein_id=AEF85555.1;transl_table=11 CP001843.1 Genbank gene 1730572 1731486 . + . ID=gene1610;Name=TREPR_2470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2470 CP001843.1 Genbank CDS 1730572 1731486 . + 0 ID=cds1533;Parent=gene1610;Dbxref=NCBI_GP:AEF86155.1;Name=AEF86155.1;Note=identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551;gbkey=CDS;product=LysM domain/M23/M37 peptidase domain protein;protein_id=AEF86155.1;transl_table=11 CP001843.1 Genbank gene 1731553 1732626 . + . ID=gene1611;Name=TREPR_2469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2469 CP001843.1 Genbank CDS 1731553 1732626 . + 0 ID=cds1534;Parent=gene1611;Dbxref=NCBI_GP:AEF84949.1;Name=AEF84949.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=AEF84949.1;transl_table=11 CP001843.1 Genbank gene 1732628 1734586 . - . ID=gene1612;Name=TREPR_2468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2468 CP001843.1 Genbank CDS 1732628 1734586 . - 0 ID=cds1535;Parent=gene1612;Dbxref=NCBI_GP:AEF84371.1;Name=AEF84371.1;Note=identified by match to protein family HMM PF01119%3B match to protein family HMM PF08676%3B match to protein family HMM TIGR00585;gbkey=CDS;product=DNA mismatch repair protein;protein_id=AEF84371.1;transl_table=11 CP001843.1 Genbank gene 1734586 1734819 . - . ID=gene1613;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=TREPR_2467 CP001843.1 Genbank CDS 1734586 1734819 . - 0 ID=cds1536;Parent=gene1613;Dbxref=NCBI_GP:AEF86268.1;Name=AEF86268.1;Note=identified by match to protein family HMM PF02609;gbkey=CDS;gene=xseB;product=exodeoxyribonuclease VII%2C small subunit;protein_id=AEF86268.1;transl_table=11 CP001843.1 Genbank gene 1734831 1736198 . - . ID=gene1614;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=TREPR_2466 CP001843.1 Genbank CDS 1734831 1736198 . - 0 ID=cds1537;Parent=gene1614;Dbxref=NCBI_GP:AEF83982.1;Name=AEF83982.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease VII%2C large subunit;protein_id=AEF83982.1;transl_table=11 CP001843.1 Genbank gene 1736257 1737822 . + . ID=gene1615;Name=TREPR_2465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2465 CP001843.1 Genbank CDS 1736257 1737822 . + 0 ID=cds1538;Parent=gene1615;Dbxref=NCBI_GP:AEF84981.1;Name=AEF84981.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF84981.1;transl_table=11 CP001843.1 Genbank gene 1737797 1738933 . + . ID=gene1616;Name=TREPR_2464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2464 CP001843.1 Genbank CDS 1737797 1738933 . + 0 ID=cds1539;Parent=gene1616;Dbxref=NCBI_GP:AEF85981.1;Name=AEF85981.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85981.1;transl_table=11 CP001843.1 Genbank gene 1738930 1739691 . + . ID=gene1617;Name=TREPR_2463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2463 CP001843.1 Genbank CDS 1738930 1739691 . + 0 ID=cds1540;Parent=gene1617;Dbxref=NCBI_GP:AEF85364.1;Name=AEF85364.1;Note=identified by match to protein family HMM PF02348;gbkey=CDS;product=spore coat polysaccharide biosynthesis protein SpsF;protein_id=AEF85364.1;transl_table=11 CP001843.1 Genbank pseudogene 1739688 1741652 . + . ID=gene1618;Name=TREPR_2462;Note=cytidylyltransferase domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2462;pseudo=true CP001843.1 Genbank gene 1741622 1743259 . + . ID=gene1619;Name=TREPR_2461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2461 CP001843.1 Genbank CDS 1741622 1743259 . + 0 ID=cds1541;Parent=gene1619;Dbxref=NCBI_GP:AEF83788.1;Name=AEF83788.1;Note=identified by match to protein family HMM PF01071%3B match to protein family HMM PF02655;gbkey=CDS;product=CarB family protein;protein_id=AEF83788.1;transl_table=11 CP001843.1 Genbank gene 1743256 1744485 . + . ID=gene1620;Name=TREPR_2460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2460 CP001843.1 Genbank CDS 1743256 1744485 . + 0 ID=cds1542;Parent=gene1620;Dbxref=NCBI_GP:AEF84763.1;Name=AEF84763.1;Note=identified by match to protein family HMM PF01520;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase%2C family 3;protein_id=AEF84763.1;transl_table=11 CP001843.1 Genbank gene 1744482 1745054 . + . ID=gene1621;Name=TREPR_2459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2459 CP001843.1 Genbank CDS 1744482 1745054 . + 0 ID=cds1543;Parent=gene1621;Dbxref=NCBI_GP:AEF85746.1;Name=AEF85746.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85746.1;transl_table=11 CP001843.1 Genbank gene 1745135 1746157 . + . ID=gene1622;Name=TREPR_2458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2458 CP001843.1 Genbank CDS 1745135 1746157 . + 0 ID=cds1544;Parent=gene1622;Dbxref=NCBI_GP:AEF86862.1;Name=AEF86862.1;Note=identified by match to protein family HMM PF04620;gbkey=CDS;product=flagellar filament outer layer protein (Sheath protein);protein_id=AEF86862.1;transl_table=11 CP001843.1 Genbank gene 1746254 1747513 . + . ID=gene1623;Name=TREPR_2457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2457 CP001843.1 Genbank CDS 1746254 1747513 . + 0 ID=cds1545;Parent=gene1623;Dbxref=NCBI_GP:AEF86267.1;Name=AEF86267.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF04607%3B match to protein family HMM PF07719;gbkey=CDS;product=RelA/SpoT domain protein;protein_id=AEF86267.1;transl_table=11 CP001843.1 Genbank gene 1747787 1748134 . - . ID=gene1624;Name=TREPR_3929;gbkey=Gene;gene_biotype=tmRNA;locus_tag=TREPR_3929 CP001843.1 Genbank tmRNA 1747787 1748134 . - . ID=rna33;Parent=gene1624;gbkey=tmRNA CP001843.1 Genbank exon 1747787 1748134 . - . ID=id38;Parent=rna33;gbkey=tmRNA CP001843.1 Genbank gene 1748179 1749240 . - . ID=gene1625;Name=TREPR_2456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2456 CP001843.1 Genbank CDS 1748179 1749240 . - 0 ID=cds1546;Parent=gene1625;Dbxref=NCBI_GP:AEF84195.1;Name=AEF84195.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01966;gbkey=CDS;product=response regulator receiver:Metal-dependent phosphohydrolase HD domain protein;protein_id=AEF84195.1;transl_table=11 CP001843.1 Genbank gene 1749230 1749601 . - . ID=gene1626;Name=TREPR_2455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2455 CP001843.1 Genbank CDS 1749230 1749601 . - 0 ID=cds1547;Parent=gene1626;Dbxref=NCBI_GP:AEF86977.1;Name=AEF86977.1;Note=identified by match to protein family HMM PF01627;gbkey=CDS;product=peptidase M52%2C hydrogen uptake protein;protein_id=AEF86977.1;transl_table=11 CP001843.1 Genbank gene 1749805 1750863 . + . ID=gene1627;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=TREPR_2454 CP001843.1 Genbank CDS 1749805 1750863 . + 0 ID=cds1548;Parent=gene1627;Dbxref=NCBI_GP:AEF85927.1;Name=AEF85927.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534;gbkey=CDS;gene=gap;product=glyceraldehyde-3-phosphate dehydrogenase%2C type I;protein_id=AEF85927.1;transl_table=11 CP001843.1 Genbank gene 1750940 1752202 . + . ID=gene1628;Name=pgk_1;gbkey=Gene;gene=pgk_1;gene_biotype=protein_coding;locus_tag=TREPR_2453 CP001843.1 Genbank CDS 1750940 1752202 . + 0 ID=cds1549;Parent=gene1628;Dbxref=NCBI_GP:AEF84718.1;Name=AEF84718.1;Note=identified by match to protein family HMM PF00162;gbkey=CDS;gene=pgk_1;product=phosphoglycerate kinase;protein_id=AEF84718.1;transl_table=11 CP001843.1 Genbank gene 1752320 1753072 . + . ID=gene1629;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=TREPR_2452 CP001843.1 Genbank CDS 1752320 1753072 . + 0 ID=cds1550;Parent=gene1629;Dbxref=NCBI_GP:AEF83943.1;Name=AEF83943.1;Note=identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419;gbkey=CDS;gene=tpiA;product=triose-phosphate isomerase;protein_id=AEF83943.1;transl_table=11 CP001843.1 Genbank gene 1753128 1755923 . + . ID=gene1630;Name=TREPR_2451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2451 CP001843.1 Genbank CDS 1753128 1755923 . + 0 ID=cds1551;Parent=gene1630;Dbxref=NCBI_GP:AEF86251.1;Name=AEF86251.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01590%3B match to protein family HMM PF02518;gbkey=CDS;product=sensory transduction histidine kinase;protein_id=AEF86251.1;transl_table=11 CP001843.1 Genbank gene 1756102 1757445 . + . ID=gene1631;Name=TREPR_2450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2450 CP001843.1 Genbank CDS 1756102 1757445 . + 0 ID=cds1552;Parent=gene1631;Dbxref=NCBI_GP:AEF85677.1;Name=AEF85677.1;Note=identified by match to protein family HMM PF00285;gbkey=CDS;product=citrate synthase domain protein;protein_id=AEF85677.1;transl_table=11 CP001843.1 Genbank gene 1757540 1758055 . + . ID=gene1632;Name=TREPR_2449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2449 CP001843.1 Genbank CDS 1757540 1758055 . + 0 ID=cds1553;Parent=gene1632;Dbxref=NCBI_GP:AEF86353.1;Name=AEF86353.1;Note=identified by match to protein family HMM PF05163;gbkey=CDS;product=putative DinB family protein;protein_id=AEF86353.1;transl_table=11 CP001843.1 Genbank gene 1758246 1760333 . - . ID=gene1633;Name=TREPR_2447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2447 CP001843.1 Genbank CDS 1758246 1760333 . - 0 ID=cds1554;Parent=gene1633;Dbxref=NCBI_GP:AEF84355.1;Name=AEF84355.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231;gbkey=CDS;product=translation elongation factor G;protein_id=AEF84355.1;transl_table=11 CP001843.1 Genbank gene 1760402 1761556 . + . ID=gene1634;Name=TREPR_2446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2446 CP001843.1 Genbank CDS 1760402 1761556 . + 0 ID=cds1555;Parent=gene1634;Dbxref=NCBI_GP:AEF85464.1;Name=AEF85464.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85464.1;transl_table=11 CP001843.1 Genbank gene 1761618 1763690 . + . ID=gene1635;Name=TREPR_2445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2445 CP001843.1 Genbank CDS 1761618 1763690 . + 0 ID=cds1556;Parent=gene1635;Dbxref=NCBI_GP:AEF86690.1;Name=AEF86690.1;Note=identified by match to protein family HMM PF00204%3B match to protein family HMM PF02518;gbkey=CDS;product=DNA topoisomerase II (N- region) domain protein;protein_id=AEF86690.1;transl_table=11 CP001843.1 Genbank gene 1763765 1765882 . + . ID=gene1636;Name=TREPR_2444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2444 CP001843.1 Genbank CDS 1763765 1765882 . + 0 ID=cds1557;Parent=gene1636;Dbxref=NCBI_GP:AEF83913.1;Name=AEF83913.1;Note=identified by match to protein family HMM PF03030%3B match to protein family HMM TIGR01104;gbkey=CDS;product=V-type H(+)-translocating pyrophosphatase;protein_id=AEF83913.1;transl_table=11 CP001843.1 Genbank gene 1765962 1767353 . - . ID=gene1637;Name=TREPR_2443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2443 CP001843.1 Genbank CDS 1765962 1767353 . - 0 ID=cds1558;Parent=gene1637;Dbxref=NCBI_GP:AEF85236.1;Name=AEF85236.1;Note=identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600;gbkey=CDS;product=permease%2C GntP family;protein_id=AEF85236.1;transl_table=11 CP001843.1 Genbank gene 1767503 1769419 . + . ID=gene1638;Name=gyrA_1;gbkey=Gene;gene=gyrA_1;gene_biotype=protein_coding;locus_tag=TREPR_2442 CP001843.1 Genbank CDS 1767503 1769419 . + 0 ID=cds1559;Parent=gene1638;Dbxref=NCBI_GP:AEF86038.1;Name=AEF86038.1;Note=identified by match to protein family HMM PF00521;gbkey=CDS;gene=gyrA_1;product=DNA gyrase%2C A subunit;protein_id=AEF86038.1;transl_table=11 CP001843.1 Genbank gene 1769420 1770199 . + . ID=gene1639;Name=TREPR_2441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2441 CP001843.1 Genbank CDS 1769420 1770199 . + 0 ID=cds1560;Parent=gene1639;Dbxref=NCBI_GP:AEF85466.1;Name=AEF85466.1;Note=identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;product=methyltransferase type 11;protein_id=AEF85466.1;transl_table=11 CP001843.1 Genbank gene 1770337 1770753 . + . ID=gene1640;Name=TREPR_2440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2440 CP001843.1 Genbank CDS 1770337 1770753 . + 0 ID=cds1561;Parent=gene1640;Dbxref=NCBI_GP:AEF86219.1;Name=AEF86219.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86219.1;transl_table=11 CP001843.1 Genbank gene 1770750 1771997 . + . ID=gene1641;Name=TREPR_2439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2439 CP001843.1 Genbank CDS 1770750 1771997 . + 0 ID=cds1562;Parent=gene1641;Dbxref=NCBI_GP:AEF85590.1;Name=AEF85590.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85590.1;transl_table=11 CP001843.1 Genbank gene 1772025 1772750 . + . ID=gene1642;Name=TREPR_2438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2438 CP001843.1 Genbank CDS 1772025 1772750 . + 0 ID=cds1563;Parent=gene1642;Dbxref=NCBI_GP:AEF86499.1;Name=AEF86499.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86499.1;transl_table=11 CP001843.1 Genbank gene 1772725 1773690 . + . ID=gene1643;Name=TREPR_2437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2437 CP001843.1 Genbank CDS 1772725 1773690 . + 0 ID=cds1564;Parent=gene1643;Dbxref=NCBI_GP:AEF83593.1;Name=AEF83593.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83593.1;transl_table=11 CP001843.1 Genbank gene 1773710 1777471 . + . ID=gene1644;Name=TREPR_2436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2436 CP001843.1 Genbank CDS 1773710 1777471 . + 0 ID=cds1565;Parent=gene1644;Dbxref=NCBI_GP:AEF86361.1;Name=AEF86361.1;Note=identified by match to protein family HMM PF02415%3B match to protein family HMM TIGR01376;gbkey=CDS;product=putative extracellular nuclease;protein_id=AEF86361.1;transl_table=11 CP001843.1 Genbank gene 1777638 1780277 . + . ID=gene1645;Name=TREPR_2435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2435 CP001843.1 Genbank CDS 1777638 1780277 . + 0 ID=cds1566;Parent=gene1645;Dbxref=NCBI_GP:AEF85576.1;Name=AEF85576.1;Note=identified by match to protein family HMM PF00211;gbkey=CDS;product=adenylate/guanylate cyclase catalytic domain protein;protein_id=AEF85576.1;transl_table=11 CP001843.1 Genbank gene 1780316 1781971 . + . ID=gene1646;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=TREPR_2434 CP001843.1 Genbank CDS 1780316 1781971 . + 0 ID=cds1567;Parent=gene1646;Dbxref=NCBI_GP:AEF84662.1;Name=AEF84662.1;Note=identified by match to protein family HMM PF01676%3B match to protein family HMM PF06415%3B match to protein family HMM TIGR01307;gbkey=CDS;gene=gpmI;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=AEF84662.1;transl_table=11 CP001843.1 Genbank gene 1782155 1783702 . + . ID=gene1647;Name=TREPR_2433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2433 CP001843.1 Genbank CDS 1782155 1783702 . + 0 ID=cds1568;Parent=gene1647;Dbxref=NCBI_GP:AEF84911.1;Name=AEF84911.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=putative ABC transporter component;protein_id=AEF84911.1;transl_table=11 CP001843.1 Genbank gene 1783746 1785296 . + . ID=gene1648;Name=TREPR_2432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2432 CP001843.1 Genbank CDS 1783746 1785296 . + 0 ID=cds1569;Parent=gene1648;Dbxref=NCBI_GP:AEF84350.1;Name=AEF84350.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=putative dipeptide-binding abc transporter protein;protein_id=AEF84350.1;transl_table=11 CP001843.1 Genbank gene 1785388 1786329 . + . ID=gene1649;Name=TREPR_2431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2431 CP001843.1 Genbank CDS 1785388 1786329 . + 0 ID=cds1570;Parent=gene1649;Dbxref=NCBI_GP:AEF86901.1;Name=AEF86901.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF86901.1;transl_table=11 CP001843.1 Genbank gene 1786340 1787212 . + . ID=gene1650;Name=TREPR_2430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2430 CP001843.1 Genbank CDS 1786340 1787212 . + 0 ID=cds1571;Parent=gene1650;Dbxref=NCBI_GP:AEF84597.1;Name=AEF84597.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=glutathione transport system permease protein GsiD;protein_id=AEF84597.1;transl_table=11 CP001843.1 Genbank gene 1787214 1788230 . + . ID=gene1651;Name=TREPR_2429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2429 CP001843.1 Genbank CDS 1787214 1788230 . + 0 ID=cds1572;Parent=gene1651;Dbxref=NCBI_GP:AEF86555.1;Name=AEF86555.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=dipeptide transport ATP-binding protein DppD;protein_id=AEF86555.1;transl_table=11 CP001843.1 Genbank gene 1788227 1789246 . + . ID=gene1652;Name=TREPR_2428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2428 CP001843.1 Genbank CDS 1788227 1789246 . + 0 ID=cds1573;Parent=gene1652;Dbxref=NCBI_GP:AEF85543.1;Name=AEF85543.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF85543.1;transl_table=11 CP001843.1 Genbank gene 1789236 1790291 . + . ID=gene1653;Name=TREPR_2427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2427 CP001843.1 Genbank CDS 1789236 1790291 . + 0 ID=cds1574;Parent=gene1653;Dbxref=NCBI_GP:AEF84961.1;Name=AEF84961.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF05343;gbkey=CDS;product=peptidase M42;protein_id=AEF84961.1;transl_table=11 CP001843.1 Genbank gene 1790293 1791318 . + . ID=gene1654;Name=TREPR_2426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2426 CP001843.1 Genbank CDS 1790293 1791318 . + 0 ID=cds1575;Parent=gene1654;Dbxref=NCBI_GP:AEF87011.1;Name=AEF87011.1;Note=identified by match to protein family HMM PF02127%3B match to protein family HMM PF05343;gbkey=CDS;product=endoglucanase M (EGM) (Endo-1%2C4-beta-glucanase)(Cellulase M);protein_id=AEF87011.1;transl_table=11 CP001843.1 Genbank gene 1791446 1792606 . + . ID=gene1655;Name=TREPR_2425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2425 CP001843.1 Genbank CDS 1791446 1792606 . + 0 ID=cds1576;Parent=gene1655;Dbxref=NCBI_GP:AEF86094.1;Name=AEF86094.1;Note=identified by match to protein family HMM PF08495;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86094.1;transl_table=11 CP001843.1 Genbank pseudogene 1792616 1794826 . + . ID=gene1656;Name=TREPR_2424;Note=two-component system hybrid sensor histidine kinase/response regulator protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2424;pseudo=true CP001843.1 Genbank gene 1794834 1797158 . - . ID=gene1657;Name=TREPR_2423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2423 CP001843.1 Genbank CDS 1794834 1797158 . - 0 ID=cds1577;Parent=gene1657;Dbxref=NCBI_GP:AEF85043.1;Name=AEF85043.1;Note=identified by match to protein family HMM PF00004;gbkey=CDS;product=ATPase%2C AAA family;protein_id=AEF85043.1;transl_table=11 CP001843.1 Genbank gene 1797189 1798400 . - . ID=gene1658;Name=TREPR_2422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2422 CP001843.1 Genbank CDS 1797189 1798400 . - 0 ID=cds1578;Parent=gene1658;Dbxref=NCBI_GP:AEF84023.1;Name=AEF84023.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84023.1;transl_table=11 CP001843.1 Genbank gene 1798415 1799047 . - . ID=gene1659;Name=TREPR_2421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2421 CP001843.1 Genbank CDS 1798415 1799047 . - 0 ID=cds1579;Parent=gene1659;Dbxref=NCBI_GP:AEF86102.1;Name=AEF86102.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86102.1;transl_table=11 CP001843.1 Genbank gene 1799148 1799939 . - . ID=gene1660;Name=TREPR_2420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2420 CP001843.1 Genbank CDS 1799148 1799939 . - 0 ID=cds1580;Parent=gene1660;Dbxref=NCBI_GP:AEF85355.1;Name=AEF85355.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85355.1;transl_table=11 CP001843.1 Genbank gene 1800027 1800380 . + . ID=gene1661;Name=TREPR_2419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2419 CP001843.1 Genbank CDS 1800027 1800380 . + 0 ID=cds1581;Parent=gene1661;Dbxref=NCBI_GP:AEF83551.1;Name=AEF83551.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83551.1;transl_table=11 CP001843.1 Genbank gene 1800377 1800748 . + . ID=gene1662;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=TREPR_2418 CP001843.1 Genbank CDS 1800377 1800748 . + 0 ID=cds1582;Parent=gene1662;Dbxref=NCBI_GP:AEF86277.1;Name=AEF86277.1;Note=identified by match to protein family HMM PF07736%3B match to protein family HMM TIGR01796;gbkey=CDS;gene=aroH;product=chorismate mutase;protein_id=AEF86277.1;transl_table=11 CP001843.1 Genbank gene 1800809 1800880 . + . ID=gene1663;Name=TREPR_3928;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3928 CP001843.1 Genbank tRNA 1800809 1800880 . + . ID=rna34;Parent=gene1663;gbkey=tRNA;product=tRNA-Glu CP001843.1 Genbank exon 1800809 1800880 . + . ID=id39;Parent=rna34;gbkey=tRNA;product=tRNA-Glu CP001843.1 Genbank gene 1801053 1801901 . + . ID=gene1664;Name=TREPR_2416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2416 CP001843.1 Genbank CDS 1801053 1801901 . + 0 ID=cds1583;Parent=gene1664;Dbxref=NCBI_GP:AEF85685.1;Name=AEF85685.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85685.1;transl_table=11 CP001843.1 Genbank gene 1801909 1802742 . + . ID=gene1665;Name=TREPR_2415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2415 CP001843.1 Genbank CDS 1801909 1802742 . + 0 ID=cds1584;Parent=gene1665;Dbxref=NCBI_GP:AEF85242.1;Name=AEF85242.1;Note=identified by match to protein family HMM PF00849;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase D;protein_id=AEF85242.1;transl_table=11 CP001843.1 Genbank gene 1802780 1804234 . + . ID=gene1666;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=TREPR_2414 CP001843.1 Genbank CDS 1802780 1804234 . + 0 ID=cds1585;Parent=gene1666;Dbxref=NCBI_GP:AEF84250.1;Name=AEF84250.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01082;gbkey=CDS;gene=murC;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=AEF84250.1;transl_table=11 CP001843.1 Genbank gene 1804231 1805097 . + . ID=gene1667;Name=TREPR_2413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2413 CP001843.1 Genbank CDS 1804231 1805097 . + 0 ID=cds1586;Parent=gene1667;Dbxref=NCBI_GP:AEF87025.1;Name=AEF87025.1;Note=identified by match to protein family HMM PF03755%3B match to protein family HMM PF08340%3B match to protein family HMM TIGR00255;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF87025.1;transl_table=11 CP001843.1 Genbank gene 1805094 1805627 . + . ID=gene1668;Name=TREPR_2412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2412 CP001843.1 Genbank CDS 1805094 1805627 . + 0 ID=cds1587;Parent=gene1668;Dbxref=NCBI_GP:AEF85016.1;Name=AEF85016.1;Note=identified by match to protein family HMM PF01202%3B match to protein family HMM TIGR02173;gbkey=CDS;product=putative cytidylate kinase;protein_id=AEF85016.1;transl_table=11 CP001843.1 Genbank gene 1805629 1806438 . + . ID=gene1669;Name=TREPR_2411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2411 CP001843.1 Genbank CDS 1805629 1806438 . + 0 ID=cds1588;Parent=gene1669;Dbxref=NCBI_GP:AEF84063.1;Name=AEF84063.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730;gbkey=CDS;product=HhH-GPD family protein;protein_id=AEF84063.1;transl_table=11 CP001843.1 Genbank gene 1806536 1806607 . + . ID=gene1670;Name=TREPR_3927;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3927 CP001843.1 Genbank tRNA 1806536 1806607 . + . ID=rna35;Parent=gene1670;gbkey=tRNA;product=tRNA-Gly CP001843.1 Genbank exon 1806536 1806607 . + . ID=id40;Parent=rna35;gbkey=tRNA;product=tRNA-Gly CP001843.1 Genbank gene 1806648 1807424 . - . ID=gene1671;Name=TREPR_2409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2409 CP001843.1 Genbank CDS 1806648 1807424 . - 0 ID=cds1589;Parent=gene1671;Dbxref=NCBI_GP:AEF83807.1;Name=AEF83807.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83807.1;transl_table=11 CP001843.1 Genbank gene 1807428 1808969 . - . ID=gene1672;Name=TREPR_2408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2408 CP001843.1 Genbank CDS 1807428 1808969 . - 0 ID=cds1590;Parent=gene1672;Dbxref=NCBI_GP:AEF86428.1;Name=AEF86428.1;Note=identified by match to protein family HMM PF02397%3B match to protein family HMM TIGR03022%3B match to protein family HMM TIGR03025;gbkey=CDS;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=AEF86428.1;transl_table=11 CP001843.1 Genbank gene 1808960 1810663 . + . ID=gene1673;Name=TREPR_2407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2407 CP001843.1 Genbank CDS 1808960 1810663 . + 0 ID=cds1591;Parent=gene1673;Dbxref=NCBI_GP:AEF87008.1;Name=AEF87008.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF87008.1;transl_table=11 CP001843.1 Genbank gene 1810687 1812552 . + . ID=gene1674;Name=TREPR_2406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2406 CP001843.1 Genbank CDS 1810687 1812552 . + 0 ID=cds1592;Parent=gene1674;Dbxref=NCBI_GP:AEF85357.1;Name=AEF85357.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85357.1;transl_table=11 CP001843.1 Genbank gene 1812554 1813651 . - . ID=gene1675;Name=TREPR_2405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2405 CP001843.1 Genbank CDS 1812554 1813651 . - 0 ID=cds1593;Parent=gene1675;Dbxref=NCBI_GP:AEF84830.1;Name=AEF84830.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycosyltransferase%2C family 1;protein_id=AEF84830.1;transl_table=11 CP001843.1 Genbank gene 1813661 1816354 . - . ID=gene1676;Name=TREPR_2404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2404 CP001843.1 Genbank CDS 1813661 1816354 . - 0 ID=cds1594;Parent=gene1676;Dbxref=NCBI_GP:AEF83629.1;Name=AEF83629.1;Note=identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592;gbkey=CDS;product=inner membrane protein;protein_id=AEF83629.1;transl_table=11 CP001843.1 Genbank gene 1816366 1819089 . - . ID=gene1677;Name=TREPR_2403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2403 CP001843.1 Genbank CDS 1816366 1819089 . - 0 ID=cds1595;Parent=gene1677;Dbxref=NCBI_GP:AEF85878.1;Name=AEF85878.1;Note=identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592;gbkey=CDS;product=inner membrane protein;protein_id=AEF85878.1;transl_table=11 CP001843.1 Genbank gene 1819105 1821828 . - . ID=gene1678;Name=TREPR_2402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2402 CP001843.1 Genbank CDS 1819105 1821828 . - 0 ID=cds1596;Parent=gene1678;Dbxref=NCBI_GP:AEF86899.1;Name=AEF86899.1;Note=identified by match to protein family HMM PF02096;gbkey=CDS;product=inner membrane protein;protein_id=AEF86899.1;transl_table=11 CP001843.1 Genbank gene 1821825 1822793 . - . ID=gene1679;Name=TREPR_2401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2401 CP001843.1 Genbank CDS 1821825 1822793 . - 0 ID=cds1597;Parent=gene1679;Dbxref=NCBI_GP:AEF83858.1;Name=AEF83858.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycosyltransferase%2C family 1;protein_id=AEF83858.1;transl_table=11 CP001843.1 Genbank gene 1822889 1824115 . - . ID=gene1680;Name=TREPR_2400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2400 CP001843.1 Genbank CDS 1822889 1824115 . - 0 ID=cds1598;Parent=gene1680;Dbxref=NCBI_GP:AEF84626.1;Name=AEF84626.1;Note=identified by match to protein family HMM PF04464;gbkey=CDS;product=CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase family;protein_id=AEF84626.1;transl_table=11 CP001843.1 Genbank gene 1824112 1826802 . - . ID=gene1681;Name=TREPR_2399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2399 CP001843.1 Genbank CDS 1824112 1826802 . - 0 ID=cds1599;Parent=gene1681;Dbxref=NCBI_GP:AEF86880.1;Name=AEF86880.1;Note=identified by match to protein family HMM PF02096;gbkey=CDS;product=inner membrane protein;protein_id=AEF86880.1;transl_table=11 CP001843.1 Genbank gene 1826796 1828103 . - . ID=gene1682;Name=TREPR_2398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2398 CP001843.1 Genbank CDS 1826796 1828103 . - 0 ID=cds1600;Parent=gene1682;Dbxref=NCBI_GP:AEF86387.1;Name=AEF86387.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01656%3B match to protein family HMM TIGR01662;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86387.1;transl_table=11 CP001843.1 Genbank gene 1828100 1828732 . - . ID=gene1683;Name=TREPR_2397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2397 CP001843.1 Genbank CDS 1828100 1828732 . - 0 ID=cds1601;Parent=gene1683;Dbxref=NCBI_GP:AEF84176.1;Name=AEF84176.1;Note=identified by match to protein family HMM PF01380;gbkey=CDS;product=phosphoheptose isomerase;protein_id=AEF84176.1;transl_table=11 CP001843.1 Genbank gene 1828711 1829745 . - . ID=gene1684;Name=TREPR_2396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2396 CP001843.1 Genbank CDS 1828711 1829745 . - 0 ID=cds1602;Parent=gene1684;Dbxref=NCBI_GP:AEF84934.1;Name=AEF84934.1;Note=identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544;gbkey=CDS;product=D-glycero-D-manno-heptose 7-phosphate kinase;protein_id=AEF84934.1;transl_table=11 CP001843.1 Genbank gene 1829781 1830842 . - . ID=gene1685;Name=TREPR_2395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2395 CP001843.1 Genbank CDS 1829781 1830842 . - 0 ID=cds1603;Parent=gene1685;Dbxref=NCBI_GP:AEF85968.1;Name=AEF85968.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycosyltransferase%2C family 1;protein_id=AEF85968.1;transl_table=11 CP001843.1 Genbank gene 1830842 1831828 . - . ID=gene1686;Name=TREPR_2394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2394 CP001843.1 Genbank CDS 1830842 1831828 . - 0 ID=cds1604;Parent=gene1686;Dbxref=NCBI_GP:AEF86709.1;Name=AEF86709.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86709.1;transl_table=11 CP001843.1 Genbank gene 1831825 1833033 . - . ID=gene1687;Name=TREPR_2393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2393 CP001843.1 Genbank CDS 1831825 1833033 . - 0 ID=cds1605;Parent=gene1687;Dbxref=NCBI_GP:AEF84916.1;Name=AEF84916.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycosyltransferase%2C family 1;protein_id=AEF84916.1;transl_table=11 CP001843.1 Genbank gene 1833068 1834282 . - . ID=gene1688;Name=TREPR_2392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2392 CP001843.1 Genbank CDS 1833068 1834282 . - 0 ID=cds1606;Parent=gene1688;Dbxref=NCBI_GP:AEF86089.1;Name=AEF86089.1;Note=identified by match to protein family HMM PF00872;gbkey=CDS;product=transposase%2C Mutator family;protein_id=AEF86089.1;transl_table=11 CP001843.1 Genbank gene 1834294 1835361 . - . ID=gene1689;Name=TREPR_2391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2391 CP001843.1 Genbank CDS 1834294 1835361 . - 0 ID=cds1607;Parent=gene1689;Dbxref=NCBI_GP:AEF86394.1;Name=AEF86394.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C group 2 family;protein_id=AEF86394.1;transl_table=11 CP001843.1 Genbank gene 1835374 1836393 . - . ID=gene1690;Name=TREPR_2390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2390 CP001843.1 Genbank CDS 1835374 1836393 . - 0 ID=cds1608;Parent=gene1690;Dbxref=NCBI_GP:AEF84094.1;Name=AEF84094.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84094.1;transl_table=11 CP001843.1 Genbank gene 1836405 1837325 . - . ID=gene1691;Name=TREPR_2389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2389 CP001843.1 Genbank CDS 1836405 1837325 . - 0 ID=cds1609;Parent=gene1691;Dbxref=NCBI_GP:AEF83914.1;Name=AEF83914.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C family 2;protein_id=AEF83914.1;transl_table=11 CP001843.1 Genbank gene 1837331 1838317 . - . ID=gene1692;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;locus_tag=TREPR_2388 CP001843.1 Genbank CDS 1837331 1838317 . - 0 ID=cds1610;Parent=gene1692;Dbxref=NCBI_GP:AEF84800.1;Name=AEF84800.1;Note=identified by match to protein family HMM PF01370;gbkey=CDS;gene=fcl;product=GDP-L-fucose synthase;protein_id=AEF84800.1;transl_table=11 CP001843.1 Genbank gene 1838283 1839368 . - . ID=gene1693;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=TREPR_2387 CP001843.1 Genbank CDS 1838283 1839368 . - 0 ID=cds1611;Parent=gene1693;Dbxref=NCBI_GP:AEF85371.1;Name=AEF85371.1;Note=identified by match to protein family HMM PF01370%3B match to protein family HMM TIGR01472;gbkey=CDS;gene=gmd;product=GDP-mannose 4%2C6-dehydratase;protein_id=AEF85371.1;transl_table=11 CP001843.1 Genbank gene 1839385 1840347 . - . ID=gene1694;Name=TREPR_2386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2386 CP001843.1 Genbank CDS 1839385 1840347 . - 0 ID=cds1612;Parent=gene1694;Dbxref=NCBI_GP:AEF86330.1;Name=AEF86330.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993;gbkey=CDS;product=UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UGD) (UXS-1);protein_id=AEF86330.1;transl_table=11 CP001843.1 Genbank gene 1840375 1841496 . - . ID=gene1695;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=TREPR_2385 CP001843.1 Genbank CDS 1840375 1841496 . - 0 ID=cds1613;Parent=gene1695;Dbxref=NCBI_GP:AEF86150.1;Name=AEF86150.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01181;gbkey=CDS;gene=rfbB;product=dTDP-glucose 4%2C6-dehydratase;protein_id=AEF86150.1;transl_table=11 CP001843.1 Genbank gene 1841451 1842338 . - . ID=gene1696;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=TREPR_2384 CP001843.1 Genbank CDS 1841451 1842338 . - 0 ID=cds1614;Parent=gene1696;Dbxref=NCBI_GP:AEF85820.1;Name=AEF85820.1;Note=identified by match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM TIGR01214;gbkey=CDS;gene=rfbD;product=dTDP-4-dehydrorhamnose reductase;protein_id=AEF85820.1;transl_table=11 CP001843.1 Genbank gene 1842335 1842868 . - . ID=gene1697;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=TREPR_2383 CP001843.1 Genbank CDS 1842335 1842868 . - 0 ID=cds1615;Parent=gene1697;Dbxref=NCBI_GP:AEF83810.1;Name=AEF83810.1;Note=identified by match to protein family HMM PF00908%3B match to protein family HMM TIGR01221;gbkey=CDS;gene=rfbC;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=AEF83810.1;transl_table=11 CP001843.1 Genbank gene 1842868 1843743 . - . ID=gene1698;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=TREPR_2382 CP001843.1 Genbank CDS 1842868 1843743 . - 0 ID=cds1616;Parent=gene1698;Dbxref=NCBI_GP:AEF84813.1;Name=AEF84813.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01207;gbkey=CDS;gene=rfbA;product=glucose-1-phosphate thymidylyltransferase;protein_id=AEF84813.1;transl_table=11 CP001843.1 Genbank gene 1843751 1845331 . - . ID=gene1699;Name=TREPR_2381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2381 CP001843.1 Genbank CDS 1843751 1845331 . - 0 ID=cds1617;Parent=gene1699;Dbxref=NCBI_GP:AEF86703.1;Name=AEF86703.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=nucleotide-diphospho-sugar transferase domain protein;protein_id=AEF86703.1;transl_table=11 CP001843.1 Genbank gene 1845376 1846272 . - . ID=gene1700;Name=TREPR_2380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2380 CP001843.1 Genbank CDS 1845376 1846272 . - 0 ID=cds1618;Parent=gene1700;Dbxref=NCBI_GP:AEF86552.1;Name=AEF86552.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C group 2 family;protein_id=AEF86552.1;transl_table=11 CP001843.1 Genbank gene 1846281 1847135 . - . ID=gene1701;Name=TREPR_2379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2379 CP001843.1 Genbank CDS 1846281 1847135 . - 0 ID=cds1619;Parent=gene1701;Dbxref=NCBI_GP:AEF85538.1;Name=AEF85538.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85538.1;transl_table=11 CP001843.1 Genbank gene 1847449 1849179 . - . ID=gene1702;Name=TREPR_2378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2378 CP001843.1 Genbank CDS 1847449 1849179 . - 0 ID=cds1620;Parent=gene1702;Dbxref=NCBI_GP:AEF84575.1;Name=AEF84575.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C group 2 family;protein_id=AEF84575.1;transl_table=11 CP001843.1 Genbank gene 1849274 1850128 . - . ID=gene1703;Name=TREPR_2377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2377 CP001843.1 Genbank CDS 1849274 1850128 . - 0 ID=cds1621;Parent=gene1703;Dbxref=NCBI_GP:AEF86358.1;Name=AEF86358.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370;gbkey=CDS;product=paratose synthase;protein_id=AEF86358.1;transl_table=11 CP001843.1 Genbank gene 1850131 1850670 . - . ID=gene1704;Name=TREPR_2376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2376 CP001843.1 Genbank CDS 1850131 1850670 . - 0 ID=cds1622;Parent=gene1704;Dbxref=NCBI_GP:AEF85343.1;Name=AEF85343.1;Note=identified by match to protein family HMM PF00908;gbkey=CDS;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=AEF85343.1;transl_table=11 CP001843.1 Genbank gene 1850748 1852085 . - . ID=gene1705;Name=TREPR_2375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2375 CP001843.1 Genbank CDS 1850748 1852085 . - 0 ID=cds1623;Parent=gene1705;Dbxref=NCBI_GP:AEF84888.1;Name=AEF84888.1;Note=identified by match to protein family HMM PF01041;gbkey=CDS;product=DegT/DnrJ/EryC1/StrS aminotransferase;protein_id=AEF84888.1;transl_table=11 CP001843.1 Genbank gene 1852078 1853151 . - . ID=gene1706;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=TREPR_2374 CP001843.1 Genbank CDS 1852078 1853151 . - 0 ID=cds1624;Parent=gene1706;Dbxref=NCBI_GP:AEF86741.1;Name=AEF86741.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR02622;gbkey=CDS;gene=rfbG;product=CDP-glucose 4%2C6-dehydratase;protein_id=AEF86741.1;transl_table=11 CP001843.1 Genbank gene 1853127 1853909 . - . ID=gene1707;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=TREPR_2373 CP001843.1 Genbank CDS 1853127 1853909 . - 0 ID=cds1625;Parent=gene1707;Dbxref=NCBI_GP:AEF84255.1;Name=AEF84255.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02623;gbkey=CDS;gene=rfbF;product=glucose-1-phosphate cytidylyltransferase;protein_id=AEF84255.1;transl_table=11 CP001843.1 Genbank gene 1853911 1854726 . - . ID=gene1708;Name=TREPR_2372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2372 CP001843.1 Genbank CDS 1853911 1854726 . - 0 ID=cds1626;Parent=gene1708;Dbxref=NCBI_GP:AEF83713.1;Name=AEF83713.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83713.1;transl_table=11 CP001843.1 Genbank gene 1854739 1856019 . - . ID=gene1709;Name=TREPR_2371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2371 CP001843.1 Genbank CDS 1854739 1856019 . - 0 ID=cds1627;Parent=gene1709;Dbxref=NCBI_GP:AEF86261.1;Name=AEF86261.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter%2C ATP-binding protein;protein_id=AEF86261.1;transl_table=11 CP001843.1 Genbank gene 1856133 1857794 . - . ID=gene1710;Name=TREPR_2370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2370 CP001843.1 Genbank CDS 1856133 1857794 . - 0 ID=cds1628;Parent=gene1710;Dbxref=NCBI_GP:AEF85693.1;Name=AEF85693.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85693.1;transl_table=11 CP001843.1 Genbank gene 1857784 1858629 . - . ID=gene1711;Name=TREPR_2369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2369 CP001843.1 Genbank CDS 1857784 1858629 . - 0 ID=cds1629;Parent=gene1711;Dbxref=NCBI_GP:AEF84641.1;Name=AEF84641.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF84641.1;transl_table=11 CP001843.1 Genbank gene 1858622 1859689 . - . ID=gene1712;Name=TREPR_2368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2368 CP001843.1 Genbank CDS 1858622 1859689 . - 0 ID=cds1630;Parent=gene1712;Dbxref=NCBI_GP:AEF84120.1;Name=AEF84120.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993;gbkey=CDS;product=UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase);protein_id=AEF84120.1;transl_table=11 CP001843.1 Genbank gene 1859697 1861028 . - . ID=gene1713;Name=TREPR_2367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2367 CP001843.1 Genbank CDS 1859697 1861028 . - 0 ID=cds1631;Parent=gene1713;Dbxref=NCBI_GP:AEF87018.1;Name=AEF87018.1;Note=identified by match to protein family HMM PF00984%3B match to protein family HMM PF02737%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=AEF87018.1;transl_table=11 CP001843.1 Genbank gene 1861032 1862846 . - . ID=gene1714;Name=TREPR_2366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2366 CP001843.1 Genbank CDS 1861032 1862846 . - 0 ID=cds1632;Parent=gene1714;Dbxref=NCBI_GP:AEF86156.1;Name=AEF86156.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR03301;gbkey=CDS;product=nucleotidyl transferase/aminotransferase%2C class V;protein_id=AEF86156.1;transl_table=11 CP001843.1 Genbank gene 1862860 1863981 . - . ID=gene1715;Name=aepY;gbkey=Gene;gene=aepY;gene_biotype=protein_coding;locus_tag=TREPR_2365 CP001843.1 Genbank CDS 1862860 1863981 . - 0 ID=cds1633;Parent=gene1715;Dbxref=NCBI_GP:AEF86847.1;Name=AEF86847.1;Note=identified by match to protein family HMM PF02775%3B match to protein family HMM TIGR03297;gbkey=CDS;gene=aepY;product=phosphonopyruvate decarboxylase;protein_id=AEF86847.1;transl_table=11 CP001843.1 Genbank gene 1863986 1865284 . - . ID=gene1716;Name=TREPR_2364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2364 CP001843.1 Genbank CDS 1863986 1865284 . - 0 ID=cds1634;Parent=gene1716;Dbxref=NCBI_GP:AEF84551.1;Name=AEF84551.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR02320;gbkey=CDS;product=phosphoenolpyruvate mutase;protein_id=AEF84551.1;transl_table=11 CP001843.1 Genbank gene 1865294 1866925 . - . ID=gene1717;Name=TREPR_2363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2363 CP001843.1 Genbank CDS 1865294 1866925 . - 0 ID=cds1635;Parent=gene1717;Dbxref=NCBI_GP:AEF84970.1;Name=AEF84970.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84970.1;transl_table=11 CP001843.1 Genbank gene 1866922 1868055 . - . ID=gene1718;Name=TREPR_2362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2362 CP001843.1 Genbank CDS 1866922 1868055 . - 0 ID=cds1636;Parent=gene1718;Dbxref=NCBI_GP:AEF84006.1;Name=AEF84006.1;Note=identified by match to protein family HMM PF01761;gbkey=CDS;product=3-dehydroquinate synthase;protein_id=AEF84006.1;transl_table=11 CP001843.1 Genbank gene 1868067 1868645 . - . ID=gene1719;Name=TREPR_2361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2361 CP001843.1 Genbank CDS 1868067 1868645 . - 0 ID=cds1637;Parent=gene1719;Dbxref=NCBI_GP:AEF85088.1;Name=AEF85088.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85088.1;transl_table=11 CP001843.1 Genbank pseudogene 1868857 1869696 . - . ID=gene1720;Name=TREPR_2360;Note=molybdopterin dehydrogenase%2C FAD-binding%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00941;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2360;pseudo=true CP001843.1 Genbank gene 1869680 1870165 . - . ID=gene1721;Name=TREPR_2359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2359 CP001843.1 Genbank CDS 1869680 1870165 . - 0 ID=cds1638;Parent=gene1721;Dbxref=NCBI_GP:AEF86636.1;Name=AEF86636.1;Note=identified by match to protein family HMM PF00111%3B match to protein family HMM PF01799;gbkey=CDS;product=isoquinoline 1-oxidoreductase subunit alpha;protein_id=AEF86636.1;transl_table=11 CP001843.1 Genbank gene 1870162 1872252 . - . ID=gene1722;Name=TREPR_2358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2358 CP001843.1 Genbank CDS 1870162 1872252 . - 0 ID=cds1639;Parent=gene1722;Dbxref=NCBI_GP:AEF85886.1;Name=AEF85886.1;Note=identified by match to protein family HMM PF01315%3B match to protein family HMM PF02738;gbkey=CDS;product=putative aldehyde oxidase and xanthine dehydrogenase family protein;protein_id=AEF85886.1;transl_table=11 CP001843.1 Genbank gene 1872272 1873522 . - . ID=gene1723;Name=TREPR_2357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2357 CP001843.1 Genbank CDS 1872272 1873522 . - 0 ID=cds1640;Parent=gene1723;Dbxref=NCBI_GP:AEF84758.1;Name=AEF84758.1;Note=identified by match to protein family HMM PF01041%3B UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate)aminotransferase%3B UDP-Ara4O aminotransferase%3B Polymyxin resistanceprotein PmrH;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=AEF84758.1;transl_table=11 CP001843.1 Genbank gene 1873512 1875050 . - . ID=gene1724;Name=TREPR_2356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2356 CP001843.1 Genbank CDS 1873512 1875050 . - 0 ID=cds1641;Parent=gene1724;Dbxref=NCBI_GP:AEF84828.1;Name=AEF84828.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;product=capsular polysaccharide biosynthesis protein;protein_id=AEF84828.1;transl_table=11 CP001843.1 Genbank gene 1875071 1875613 . - . ID=gene1725;Name=TREPR_2355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2355 CP001843.1 Genbank CDS 1875071 1875613 . - 0 ID=cds1642;Parent=gene1725;Dbxref=NCBI_GP:AEF86342.1;Name=AEF86342.1;Note=identified by match to protein family HMM PF02357;gbkey=CDS;product=transcription antitermination protein%2C NusG family;protein_id=AEF86342.1;transl_table=11 CP001843.1 Genbank gene 1875713 1876216 . + . ID=gene1726;Name=TREPR_2354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2354 CP001843.1 Genbank CDS 1875713 1876216 . + 0 ID=cds1643;Parent=gene1726;Dbxref=NCBI_GP:AEF83940.1;Name=AEF83940.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83940.1;transl_table=11 CP001843.1 Genbank gene 1876231 1877463 . + . ID=gene1727;Name=TREPR_2353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2353 CP001843.1 Genbank CDS 1876231 1877463 . + 0 ID=cds1644;Parent=gene1727;Dbxref=NCBI_GP:AEF85102.1;Name=AEF85102.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85102.1;transl_table=11 CP001843.1 Genbank gene 1877578 1880358 . - . ID=gene1728;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=TREPR_2352 CP001843.1 Genbank CDS 1877578 1880358 . - 0 ID=cds1645;Parent=gene1728;Dbxref=NCBI_GP:AEF86001.1;Name=AEF86001.1;Note=identified by match to protein family HMM PF01043%3B match to protein family HMM PF02810%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963;gbkey=CDS;gene=secA;product=preprotein translocase%2C SecA subunit;protein_id=AEF86001.1;transl_table=11 CP001843.1 Genbank gene 1880479 1881681 . + . ID=gene1729;Name=TREPR_2351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2351 CP001843.1 Genbank CDS 1880479 1881681 . + 0 ID=cds1646;Parent=gene1729;Dbxref=NCBI_GP:AEF86957.1;Name=AEF86957.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86957.1;transl_table=11 CP001843.1 Genbank gene 1881706 1882284 . + . ID=gene1730;Name=TREPR_2350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2350 CP001843.1 Genbank CDS 1881706 1882284 . + 0 ID=cds1647;Parent=gene1730;Dbxref=NCBI_GP:AEF84141.1;Name=AEF84141.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84141.1;transl_table=11 CP001843.1 Genbank gene 1882578 1882988 . + . ID=gene1731;Name=TREPR_2349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2349 CP001843.1 Genbank CDS 1882578 1882988 . + 0 ID=cds1648;Parent=gene1731;Dbxref=NCBI_GP:AEF83833.1;Name=AEF83833.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83833.1;transl_table=11 CP001843.1 Genbank gene 1883010 1883387 . + . ID=gene1732;Name=mutT_1;gbkey=Gene;gene=mutT_1;gene_biotype=protein_coding;locus_tag=TREPR_2347 CP001843.1 Genbank CDS 1883010 1883387 . + 0 ID=cds1649;Parent=gene1732;Dbxref=NCBI_GP:AEF85307.1;Name=AEF85307.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;gene=mutT_1;product=MutT/NUDIX family protein;protein_id=AEF85307.1;transl_table=11 CP001843.1 Genbank gene 1883380 1884417 . - . ID=gene1733;Name=TREPR_2348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2348 CP001843.1 Genbank CDS 1883380 1884417 . - 0 ID=cds1650;Parent=gene1733;Dbxref=NCBI_GP:AEF84730.1;Name=AEF84730.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84730.1;transl_table=11 CP001843.1 Genbank gene 1884469 1884810 . + . ID=gene1734;Name=TREPR_2346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2346 CP001843.1 Genbank CDS 1884469 1884810 . + 0 ID=cds1651;Parent=gene1734;Dbxref=NCBI_GP:AEF86320.1;Name=AEF86320.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86320.1;transl_table=11 CP001843.1 Genbank gene 1884921 1886639 . + . ID=gene1735;Name=TREPR_2345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2345 CP001843.1 Genbank CDS 1884921 1886639 . + 0 ID=cds1652;Parent=gene1735;Dbxref=NCBI_GP:AEF84808.1;Name=AEF84808.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84808.1;transl_table=11 CP001843.1 Genbank gene 1886725 1888125 . + . ID=gene1736;Name=TREPR_2344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2344 CP001843.1 Genbank CDS 1886725 1888125 . + 0 ID=cds1653;Parent=gene1736;Dbxref=NCBI_GP:AEF86566.1;Name=AEF86566.1;Note=identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012;gbkey=CDS;product=protein RecA (Recombinase A);protein_id=AEF86566.1;transl_table=11 CP001843.1 Genbank gene 1888139 1889362 . + . ID=gene1737;Name=TREPR_2343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2343 CP001843.1 Genbank CDS 1888139 1889362 . + 0 ID=cds1654;Parent=gene1737;Dbxref=NCBI_GP:AEF85427.1;Name=AEF85427.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;product=N-acyl-L-amino acid amidohydrolase;protein_id=AEF85427.1;transl_table=11 CP001843.1 Genbank gene 1889450 1890253 . + . ID=gene1738;Name=TREPR_2342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2342 CP001843.1 Genbank CDS 1889450 1890253 . + 0 ID=cds1655;Parent=gene1738;Dbxref=NCBI_GP:AEF85112.1;Name=AEF85112.1;Note=identified by match to protein family HMM PF02616;gbkey=CDS;product=ScpA/B protein;protein_id=AEF85112.1;transl_table=11 CP001843.1 Genbank gene 1890253 1890798 . + . ID=gene1739;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=TREPR_2341 CP001843.1 Genbank CDS 1890253 1890798 . + 0 ID=cds1656;Parent=gene1739;Dbxref=NCBI_GP:AEF84337.1;Name=AEF84337.1;Note=identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281;gbkey=CDS;gene=scpB;product=segregation and condensation protein B;protein_id=AEF84337.1;transl_table=11 CP001843.1 Genbank gene 1890782 1891624 . + . ID=gene1740;Name=TREPR_2340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2340 CP001843.1 Genbank CDS 1890782 1891624 . + 0 ID=cds1657;Parent=gene1740;Dbxref=NCBI_GP:AEF86665.1;Name=AEF86665.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;product=RNA pseudouridylate synthase family protein;protein_id=AEF86665.1;transl_table=11 CP001843.1 Genbank gene 1891608 1894004 . + . ID=gene1741;Name=TREPR_2339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2339 CP001843.1 Genbank CDS 1891608 1894004 . + 0 ID=cds1658;Parent=gene1741;Dbxref=NCBI_GP:AEF83765.1;Name=AEF83765.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF02224%3B match to protein family HMM TIGR00017%3B match to protein family HMM TIGR00717;gbkey=CDS;product=cytidylate kinase/ribosomal protein S1;protein_id=AEF83765.1;transl_table=11 CP001843.1 Genbank gene 1894030 1895544 . + . ID=gene1742;Name=nifA_2;gbkey=Gene;gene=nifA_2;gene_biotype=protein_coding;locus_tag=TREPR_2338 CP001843.1 Genbank CDS 1894030 1895544 . + 0 ID=cds1659;Parent=gene1742;Dbxref=NCBI_GP:AEF84073.1;Name=AEF84073.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728;gbkey=CDS;gene=nifA_2;product=Nif-specific regulatory protein;protein_id=AEF84073.1;transl_table=11 CP001843.1 Genbank gene 1895547 1896236 . + . ID=gene1743;Name=TREPR_2337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2337 CP001843.1 Genbank CDS 1895547 1896236 . + 0 ID=cds1660;Parent=gene1743;Dbxref=NCBI_GP:AEF86640.1;Name=AEF86640.1;Note=identified by match to protein family HMM PF00515;gbkey=CDS;product=putative TPR domain protein;protein_id=AEF86640.1;transl_table=11 CP001843.1 Genbank gene 1896239 1897030 . + . ID=gene1744;Name=TREPR_2336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2336 CP001843.1 Genbank CDS 1896239 1897030 . + 0 ID=cds1661;Parent=gene1744;Dbxref=NCBI_GP:AEF85891.1;Name=AEF85891.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85891.1;transl_table=11 CP001843.1 Genbank gene 1897020 1897175 . + . ID=gene1745;Name=TREPR_2335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2335 CP001843.1 Genbank CDS 1897020 1897175 . + 0 ID=cds1662;Parent=gene1745;Dbxref=NCBI_GP:AEF84666.1;Name=AEF84666.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84666.1;transl_table=11 CP001843.1 Genbank gene 1897221 1898291 . + . ID=gene1746;Name=TREPR_2334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2334 CP001843.1 Genbank CDS 1897221 1898291 . + 0 ID=cds1663;Parent=gene1746;Dbxref=NCBI_GP:AEF86179.1;Name=AEF86179.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383;gbkey=CDS;product=methionine import ATP-binding protein MetN;protein_id=AEF86179.1;transl_table=11 CP001843.1 Genbank gene 1898288 1898968 . + . ID=gene1747;Name=TREPR_2333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2333 CP001843.1 Genbank CDS 1898288 1898968 . + 0 ID=cds1664;Parent=gene1747;Dbxref=NCBI_GP:AEF86174.1;Name=AEF86174.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=D-methionine transport system permease protein MetI;protein_id=AEF86174.1;transl_table=11 CP001843.1 Genbank gene 1898985 1899845 . + . ID=gene1748;Name=TREPR_2332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2332 CP001843.1 Genbank CDS 1898985 1899845 . + 0 ID=cds1665;Parent=gene1748;Dbxref=NCBI_GP:AEF85618.1;Name=AEF85618.1;Note=identified by match to protein family HMM PF03180;gbkey=CDS;product=nlpa lipoprotein;protein_id=AEF85618.1;transl_table=11 CP001843.1 Genbank gene 1899858 1901012 . + . ID=gene1749;Name=TREPR_2331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2331 CP001843.1 Genbank CDS 1899858 1901012 . + 0 ID=cds1666;Parent=gene1749;Dbxref=NCBI_GP:AEF84621.1;Name=AEF84621.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;product=thermostable carboxypeptidase 1;protein_id=AEF84621.1;transl_table=11 CP001843.1 Genbank gene 1901017 1903467 . - . ID=gene1750;Name=TREPR_2330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2330 CP001843.1 Genbank CDS 1901017 1903467 . - 0 ID=cds1667;Parent=gene1750;Dbxref=NCBI_GP:AEF83796.1;Name=AEF83796.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF83796.1;transl_table=11 CP001843.1 Genbank gene 1903469 1904779 . - . ID=gene1751;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;locus_tag=TREPR_2329 CP001843.1 Genbank CDS 1903469 1904779 . - 0 ID=cds1668;Parent=gene1751;Dbxref=NCBI_GP:AEF86699.1;Name=AEF86699.1;Note=identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02210;gbkey=CDS;gene=mrdB;product=rod shape-determining protein RodA;protein_id=AEF86699.1;transl_table=11 CP001843.1 Genbank gene 1904776 1906653 . - . ID=gene1752;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=TREPR_2328 CP001843.1 Genbank CDS 1904776 1906653 . - 0 ID=cds1669;Parent=gene1752;Dbxref=NCBI_GP:AEF85876.1;Name=AEF85876.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM TIGR03423;gbkey=CDS;gene=mrdA;product=penicillin-binding protein 2;protein_id=AEF85876.1;transl_table=11 CP001843.1 Genbank gene 1906653 1907156 . - . ID=gene1753;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=TREPR_2327 CP001843.1 Genbank CDS 1906653 1907156 . - 0 ID=cds1670;Parent=gene1753;Dbxref=NCBI_GP:AEF85141.1;Name=AEF85141.1;Note=identified by match to protein family HMM PF04093%3B match to protein family HMM TIGR03426;gbkey=CDS;gene=mreD;product=rod shape-determining protein MreD;protein_id=AEF85141.1;transl_table=11 CP001843.1 Genbank gene 1907149 1908039 . - . ID=gene1754;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=TREPR_2326 CP001843.1 Genbank CDS 1907149 1908039 . - 0 ID=cds1671;Parent=gene1754;Dbxref=NCBI_GP:AEF84290.1;Name=AEF84290.1;Note=identified by match to protein family HMM PF04085%3B match to protein family HMM TIGR00219;gbkey=CDS;gene=mreC;product=rod shape-determining protein MreC;protein_id=AEF84290.1;transl_table=11 CP001843.1 Genbank gene 1908058 1909083 . - . ID=gene1755;Name=TREPR_2325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2325 CP001843.1 Genbank CDS 1908058 1909083 . - 0 ID=cds1672;Parent=gene1755;Dbxref=NCBI_GP:AEF86991.1;Name=AEF86991.1;Note=identified by match to protein family HMM PF06723%3B match to protein family HMM TIGR00904;gbkey=CDS;product=Rod shape-determining protein MreB;protein_id=AEF86991.1;transl_table=11 CP001843.1 Genbank gene 1909093 1910043 . - . ID=gene1756;Name=TREPR_2324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2324 CP001843.1 Genbank CDS 1909093 1910043 . - 0 ID=cds1673;Parent=gene1756;Dbxref=NCBI_GP:AEF83692.1;Name=AEF83692.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07721;gbkey=CDS;product=putative TPR domain protein;protein_id=AEF83692.1;transl_table=11 CP001843.1 Genbank gene 1910504 1910851 . + . ID=gene1757;Name=TREPR_2322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2322 CP001843.1 Genbank CDS 1910504 1910851 . + 0 ID=cds1674;Parent=gene1757;Dbxref=NCBI_GP:AEF85192.1;Name=AEF85192.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85192.1;transl_table=11 CP001843.1 Genbank gene 1910839 1911681 . - . ID=gene1758;Name=TREPR_2323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2323 CP001843.1 Genbank CDS 1910839 1911681 . - 0 ID=cds1675;Parent=gene1758;Dbxref=NCBI_GP:AEF84191.1;Name=AEF84191.1;Note=identified by match to protein family HMM PF02591;gbkey=CDS;product=putative zinc ribbon domain family;protein_id=AEF84191.1;transl_table=11 CP001843.1 Genbank gene 1911803 1913572 . - . ID=gene1759;Name=TREPR_2321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2321 CP001843.1 Genbank CDS 1911803 1913572 . - 0 ID=cds1676;Parent=gene1759;Dbxref=NCBI_GP:AEF84891.1;Name=AEF84891.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF03979%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937;gbkey=CDS;product=RNA polymerase sigma factor RpoD (Sigma-70);protein_id=AEF84891.1;transl_table=11 CP001843.1 Genbank gene 1913569 1915473 . - . ID=gene1760;Name=TREPR_2320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2320 CP001843.1 Genbank CDS 1913569 1915473 . - 0 ID=cds1677;Parent=gene1760;Dbxref=NCBI_GP:AEF83779.1;Name=AEF83779.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM PF08275%3B match to protein family HMM TIGR01391;gbkey=CDS;product=DNA primase;protein_id=AEF83779.1;transl_table=11 CP001843.1 Genbank gene 1915473 1916573 . - . ID=gene1761;Name=TREPR_2319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2319 CP001843.1 Genbank CDS 1915473 1916573 . - 0 ID=cds1678;Parent=gene1761;Dbxref=NCBI_GP:AEF86911.1;Name=AEF86911.1;Note=identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247;gbkey=CDS;product=aminodeoxychorismate lyase;protein_id=AEF86911.1;transl_table=11 CP001843.1 Genbank gene 1916576 1917517 . - . ID=gene1762;Name=TREPR_2318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2318 CP001843.1 Genbank CDS 1916576 1917517 . - 0 ID=cds1679;Parent=gene1762;Dbxref=NCBI_GP:AEF85922.1;Name=AEF85922.1;gbkey=CDS;product=metallo-beta-lactamase family protein;protein_id=AEF85922.1;transl_table=11 CP001843.1 Genbank gene 1917517 1917984 . - . ID=gene1763;Name=TREPR_2317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2317 CP001843.1 Genbank CDS 1917517 1917984 . - 0 ID=cds1680;Parent=gene1763;Dbxref=NCBI_GP:AEF85186.1;Name=AEF85186.1;Note=identified by match to protein family HMM PF03692;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85186.1;transl_table=11 CP001843.1 Genbank gene 1918157 1919716 . + . ID=gene1764;Name=TREPR_2316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2316 CP001843.1 Genbank CDS 1918157 1919716 . + 0 ID=cds1681;Parent=gene1764;Dbxref=NCBI_GP:AEF84208.1;Name=AEF84208.1;Note=identified by match to protein family HMM PF07556;gbkey=CDS;product=membrane protein;protein_id=AEF84208.1;transl_table=11 CP001843.1 Genbank gene 1919709 1920482 . + . ID=gene1765;Name=TREPR_2315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2315 CP001843.1 Genbank CDS 1919709 1920482 . + 0 ID=cds1682;Parent=gene1765;Dbxref=NCBI_GP:AEF83809.1;Name=AEF83809.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83809.1;transl_table=11 CP001843.1 Genbank gene 1920728 1921378 . + . ID=gene1766;Name=TREPR_2313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2313 CP001843.1 Genbank CDS 1920728 1921378 . + 0 ID=cds1683;Parent=gene1766;Dbxref=NCBI_GP:AEF84517.1;Name=AEF84517.1;Note=identified by match to protein family HMM PF00730;gbkey=CDS;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=AEF84517.1;transl_table=11 CP001843.1 Genbank gene 1921375 1921941 . + . ID=gene1767;Name=TREPR_2312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2312 CP001843.1 Genbank CDS 1921375 1921941 . + 0 ID=cds1684;Parent=gene1767;Dbxref=NCBI_GP:AEF85050.1;Name=AEF85050.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02805;gbkey=CDS;product=methylphosphotriester-DNA alkyltransferase;protein_id=AEF85050.1;transl_table=11 CP001843.1 Genbank gene 1921919 1922434 . + . ID=gene1768;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=TREPR_2311 CP001843.1 Genbank CDS 1921919 1922434 . + 0 ID=cds1685;Parent=gene1768;Dbxref=NCBI_GP:AEF86070.1;Name=AEF86070.1;Note=identified by match to protein family HMM PF01035%3B match to protein family HMM TIGR00589;gbkey=CDS;gene=ogt;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=AEF86070.1;transl_table=11 CP001843.1 Genbank gene 1922427 1923326 . + . ID=gene1769;Name=TREPR_2310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2310 CP001843.1 Genbank CDS 1922427 1923326 . + 0 ID=cds1686;Parent=gene1769;Dbxref=NCBI_GP:AEF86815.1;Name=AEF86815.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86815.1;transl_table=11 CP001843.1 Genbank gene 1923383 1924819 . - . ID=gene1770;Name=TREPR_2309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2309 CP001843.1 Genbank CDS 1923383 1924819 . - 0 ID=cds1687;Parent=gene1770;Dbxref=NCBI_GP:AEF85021.1;Name=AEF85021.1;Note=identified by match to protein family HMM PF00672%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=putative signaling protein;protein_id=AEF85021.1;transl_table=11 CP001843.1 Genbank gene 1924923 1925342 . - . ID=gene1771;Name=TREPR_2308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2308 CP001843.1 Genbank CDS 1924923 1925342 . - 0 ID=cds1688;Parent=gene1771;Dbxref=NCBI_GP:AEF85672.1;Name=AEF85672.1;Note=identified by match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937;gbkey=CDS;product=sigma-24%2C ECF subfamily;protein_id=AEF85672.1;transl_table=11 CP001843.1 Genbank gene 1925490 1926290 . - . ID=gene1772;Name=TREPR_2307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2307 CP001843.1 Genbank CDS 1925490 1926290 . - 0 ID=cds1689;Parent=gene1772;Dbxref=NCBI_GP:AEF86230.1;Name=AEF86230.1;Note=identified by match to protein family HMM PF01061;gbkey=CDS;product=ABC transporter family protein;protein_id=AEF86230.1;transl_table=11 CP001843.1 Genbank gene 1926287 1927057 . - . ID=gene1773;Name=TREPR_2306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2306 CP001843.1 Genbank CDS 1926287 1927057 . - 0 ID=cds1690;Parent=gene1773;Dbxref=NCBI_GP:AEF83702.1;Name=AEF83702.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=daunorubicin resistance ATP-binding protein DrrA;protein_id=AEF83702.1;transl_table=11 CP001843.1 Genbank gene 1927054 1927443 . - . ID=gene1774;Name=TREPR_2305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2305 CP001843.1 Genbank CDS 1927054 1927443 . - 0 ID=cds1691;Parent=gene1774;Dbxref=NCBI_GP:AEF85510.1;Name=AEF85510.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85510.1;transl_table=11 CP001843.1 Genbank gene 1927527 1927649 . - . ID=gene1775;Name=TREPR_2304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2304 CP001843.1 Genbank CDS 1927527 1927649 . - 0 ID=cds1692;Parent=gene1775;Dbxref=NCBI_GP:AEF85036.1;Name=AEF85036.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85036.1;transl_table=11 CP001843.1 Genbank gene 1927791 1929104 . + . ID=gene1776;Name=TREPR_2303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2303 CP001843.1 Genbank CDS 1927791 1929104 . + 0 ID=cds1693;Parent=gene1776;Dbxref=NCBI_GP:AEF84078.1;Name=AEF84078.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative bacterial extracellular solute-binding protein;protein_id=AEF84078.1;transl_table=11 CP001843.1 Genbank gene 1929117 1930469 . + . ID=gene1777;Name=TREPR_2302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2302 CP001843.1 Genbank CDS 1929117 1930469 . + 0 ID=cds1694;Parent=gene1777;Dbxref=NCBI_GP:AEF86954.1;Name=AEF86954.1;Note=identified by match to protein family HMM PF00196;gbkey=CDS;product=transcriptional regulator%2C LuxR family protein;protein_id=AEF86954.1;transl_table=11 CP001843.1 Genbank gene 1930624 1933788 . + . ID=gene1778;Name=TREPR_2301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2301 CP001843.1 Genbank CDS 1930624 1933788 . + 0 ID=cds1695;Parent=gene1778;Dbxref=NCBI_GP:AEF85960.1;Name=AEF85960.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=multi-sensor Hybrid Histidine Kinase;protein_id=AEF85960.1;transl_table=11 CP001843.1 Genbank gene 1933867 1934538 . + . ID=gene1779;Name=TREPR_2300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2300 CP001843.1 Genbank CDS 1933867 1934538 . + 0 ID=cds1696;Parent=gene1779;Dbxref=NCBI_GP:AEF84713.1;Name=AEF84713.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=two-component response regulator;protein_id=AEF84713.1;transl_table=11 CP001843.1 Genbank gene 1934703 1936628 . + . ID=gene1780;Name=TREPR_2299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2299 CP001843.1 Genbank CDS 1934703 1936628 . + 0 ID=cds1697;Parent=gene1780;Dbxref=NCBI_GP:AEF83722.1;Name=AEF83722.1;Note=identified by match to protein family HMM PF07581;gbkey=CDS;product=GLUG domain protein;protein_id=AEF83722.1;transl_table=11 CP001843.1 Genbank gene 1936666 1937145 . + . ID=gene1781;Name=TREPR_2298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2298 CP001843.1 Genbank CDS 1936666 1937145 . + 0 ID=cds1698;Parent=gene1781;Dbxref=NCBI_GP:AEF85742.1;Name=AEF85742.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85742.1;transl_table=11 CP001843.1 Genbank gene 1937142 1938341 . + . ID=gene1782;Name=TREPR_2297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2297 CP001843.1 Genbank CDS 1937142 1938341 . + 0 ID=cds1699;Parent=gene1782;Dbxref=NCBI_GP:AEF85711.1;Name=AEF85711.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85711.1;transl_table=11 CP001843.1 Genbank gene 1938354 1939061 . + . ID=gene1783;Name=TREPR_2296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2296 CP001843.1 Genbank CDS 1938354 1939061 . + 0 ID=cds1700;Parent=gene1783;Dbxref=NCBI_GP:AEF85403.1;Name=AEF85403.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85403.1;transl_table=11 CP001843.1 Genbank gene 1939151 1940137 . + . ID=gene1784;Name=TREPR_2295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2295 CP001843.1 Genbank CDS 1939151 1940137 . + 0 ID=cds1701;Parent=gene1784;Dbxref=NCBI_GP:AEF84415.1;Name=AEF84415.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84415.1;transl_table=11 CP001843.1 Genbank pseudogene 1940097 1942580 . + . ID=gene1785;Name=TREPR_2294;Note=halomucin%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07581;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2294;pseudo=true CP001843.1 Genbank gene 1942558 1942677 . + . ID=gene1786;Name=TREPR_2293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2293 CP001843.1 Genbank CDS 1942558 1942677 . + 0 ID=cds1702;Parent=gene1786;Dbxref=NCBI_GP:AEF86968.1;Name=AEF86968.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86968.1;transl_table=11 CP001843.1 Genbank gene 1942852 1944453 . + . ID=gene1787;Name=TREPR_2292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2292 CP001843.1 Genbank CDS 1942852 1944453 . + 0 ID=cds1703;Parent=gene1787;Dbxref=NCBI_GP:AEF83929.1;Name=AEF83929.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83929.1;transl_table=11 CP001843.1 Genbank gene 1944450 1946159 . + . ID=gene1788;Name=TREPR_2291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2291 CP001843.1 Genbank CDS 1944450 1946159 . + 0 ID=cds1704;Parent=gene1788;Dbxref=NCBI_GP:AEF84021.1;Name=AEF84021.1;gbkey=CDS;product=putative tetratricopeptide TPR_2 repeat protein;protein_id=AEF84021.1;transl_table=11 CP001843.1 Genbank gene 1946382 1946690 . - . ID=gene1789;Name=TREPR_2290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2290 CP001843.1 Genbank CDS 1946382 1946690 . - 0 ID=cds1705;Parent=gene1789;Dbxref=NCBI_GP:AEF85420.1;Name=AEF85420.1;gbkey=CDS;product=divergent AAA ATPase;protein_id=AEF85420.1;transl_table=11 CP001843.1 Genbank gene 1946660 1946830 . - . ID=gene1790;Name=TREPR_2289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2289 CP001843.1 Genbank CDS 1946660 1946830 . - 0 ID=cds1706;Parent=gene1790;Dbxref=NCBI_GP:AEF86490.1;Name=AEF86490.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86490.1;transl_table=11 CP001843.1 Genbank gene 1947229 1947405 . - . ID=gene1791;Name=TREPR_2288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2288 CP001843.1 Genbank CDS 1947229 1947405 . - 0 ID=cds1707;Parent=gene1791;Dbxref=NCBI_GP:AEF84341.1;Name=AEF84341.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84341.1;transl_table=11 CP001843.1 Genbank gene 1947809 1948873 . - . ID=gene1792;Name=TREPR_2286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2286 CP001843.1 Genbank CDS 1947809 1948873 . - 0 ID=cds1708;Parent=gene1792;Dbxref=NCBI_GP:AEF86103.1;Name=AEF86103.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86103.1;transl_table=11 CP001843.1 Genbank gene 1948866 1950875 . - . ID=gene1793;Name=TREPR_2285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2285 CP001843.1 Genbank CDS 1948866 1950875 . - 0 ID=cds1709;Parent=gene1793;Dbxref=NCBI_GP:AEF86889.1;Name=AEF86889.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86889.1;transl_table=11 CP001843.1 Genbank gene 1950800 1951021 . - . ID=gene1794;Name=TREPR_2284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2284 CP001843.1 Genbank CDS 1950800 1951021 . - 0 ID=cds1710;Parent=gene1794;Dbxref=NCBI_GP:AEF85487.1;Name=AEF85487.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85487.1;transl_table=11 CP001843.1 Genbank gene 1951205 1952773 . + . ID=gene1795;Name=TREPR_2283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2283 CP001843.1 Genbank CDS 1951205 1952773 . + 0 ID=cds1711;Parent=gene1795;Dbxref=NCBI_GP:AEF86264.1;Name=AEF86264.1;Note=identified by match to protein family HMM PF02384;gbkey=CDS;product=type I restriction-modification system%2C M subunit;protein_id=AEF86264.1;transl_table=11 CP001843.1 Genbank gene 1952760 1953902 . + . ID=gene1796;Name=TREPR_2282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2282 CP001843.1 Genbank CDS 1952760 1953902 . + 0 ID=cds1712;Parent=gene1796;Dbxref=NCBI_GP:AEF84308.1;Name=AEF84308.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84308.1;transl_table=11 CP001843.1 Genbank gene 1953899 1954774 . + . ID=gene1797;Name=TREPR_2281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2281 CP001843.1 Genbank CDS 1953899 1954774 . + 0 ID=cds1713;Parent=gene1797;Dbxref=NCBI_GP:AEF85070.1;Name=AEF85070.1;gbkey=CDS;product=putative DNA-binding protein;protein_id=AEF85070.1;transl_table=11 CP001843.1 Genbank gene 1954771 1958007 . + . ID=gene1798;Name=TREPR_2280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2280 CP001843.1 Genbank CDS 1954771 1958007 . + 0 ID=cds1714;Parent=gene1798;Dbxref=NCBI_GP:AEF85850.1;Name=AEF85850.1;Note=identified by match to protein family HMM PF04313%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00348;gbkey=CDS;product=HsdR;protein_id=AEF85850.1;transl_table=11 CP001843.1 Genbank gene 1958000 1960852 . + . ID=gene1799;Name=TREPR_2279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2279 CP001843.1 Genbank CDS 1958000 1960852 . + 0 ID=cds1715;Parent=gene1799;Dbxref=NCBI_GP:AEF85539.1;Name=AEF85539.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85539.1;transl_table=11 CP001843.1 Genbank gene 1960885 1962576 . + . ID=gene1800;Name=TREPR_2278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2278 CP001843.1 Genbank CDS 1960885 1962576 . + 0 ID=cds1716;Parent=gene1800;Dbxref=NCBI_GP:AEF86530.1;Name=AEF86530.1;Note=identified by match to protein family HMM PF03235;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86530.1;transl_table=11 CP001843.1 Genbank pseudogene 1962714 1962950 . + . ID=gene1801;Name=TREPR_2276;Note=putative transcriptional regulator%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2276;pseudo=true CP001843.1 Genbank pseudogene 1962951 1964027 . + . ID=gene1802;Name=TREPR_2274;Note=conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2274;pseudo=true CP001843.1 Genbank gene 1964019 1964252 . - . ID=gene1803;Name=TREPR_2275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2275 CP001843.1 Genbank CDS 1964019 1964252 . - 0 ID=cds1717;Parent=gene1803;Dbxref=NCBI_GP:AEF84224.1;Name=AEF84224.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84224.1;transl_table=11 CP001843.1 Genbank gene 1964275 1965606 . - . ID=gene1804;Name=TREPR_2273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2273 CP001843.1 Genbank CDS 1964275 1965606 . - 0 ID=cds1718;Parent=gene1804;Dbxref=NCBI_GP:AEF84116.1;Name=AEF84116.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84116.1;transl_table=11 CP001843.1 Genbank gene 1965740 1965997 . + . ID=gene1805;Name=TREPR_2271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2271 CP001843.1 Genbank CDS 1965740 1965997 . + 0 ID=cds1719;Parent=gene1805;Dbxref=NCBI_GP:AEF86151.1;Name=AEF86151.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86151.1;transl_table=11 CP001843.1 Genbank gene 1965994 1966125 . - . ID=gene1806;Name=TREPR_2272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2272 CP001843.1 Genbank CDS 1965994 1966125 . - 0 ID=cds1720;Parent=gene1806;Dbxref=NCBI_GP:AEF86840.1;Name=AEF86840.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86840.1;transl_table=11 CP001843.1 Genbank pseudogene 1966524 1967507 . + . ID=gene1807;Name=TREPR_2270;Note=conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2270;pseudo=true CP001843.1 Genbank pseudogene 1967526 1971092 . + . ID=gene1808;Name=TREPR_2269;Note=hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2269;pseudo=true CP001843.1 Genbank gene 1971114 1972328 . - . ID=gene1809;Name=TREPR_2268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2268 CP001843.1 Genbank CDS 1971114 1972328 . - 0 ID=cds1721;Parent=gene1809;Dbxref=NCBI_GP:AEF85517.1;Name=AEF85517.1;Note=identified by match to protein family HMM PF00872;gbkey=CDS;product=transposase%2C Mutator family;protein_id=AEF85517.1;transl_table=11 CP001843.1 Genbank gene 1972618 1972737 . - . ID=gene1810;Name=TREPR_2267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2267 CP001843.1 Genbank CDS 1972618 1972737 . - 0 ID=cds1722;Parent=gene1810;Dbxref=NCBI_GP:AEF84755.1;Name=AEF84755.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84755.1;transl_table=11 CP001843.1 Genbank gene 1973172 1973393 . + . ID=gene1811;Name=TREPR_2266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2266 CP001843.1 Genbank CDS 1973172 1973393 . + 0 ID=cds1723;Parent=gene1811;Dbxref=NCBI_GP:AEF84896.1;Name=AEF84896.1;gbkey=CDS;product=glycoprotein G;protein_id=AEF84896.1;transl_table=11 CP001843.1 Genbank pseudogene 1973490 1974191 . + . ID=gene1812;Name=TREPR_2265;Note=conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2265;pseudo=true CP001843.1 Genbank gene 1974955 1975176 . + . ID=gene1813;Name=TREPR_2264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2264 CP001843.1 Genbank CDS 1974955 1975176 . + 0 ID=cds1724;Parent=gene1813;Dbxref=NCBI_GP:AEF84521.1;Name=AEF84521.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84521.1;transl_table=11 CP001843.1 Genbank gene 1975443 1976879 . - . ID=gene1814;Name=TREPR_2263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2263 CP001843.1 Genbank CDS 1975443 1976879 . - 0 ID=cds1725;Parent=gene1814;Dbxref=NCBI_GP:AEF84886.1;Name=AEF84886.1;Note=identified by match to protein family HMM PF08706%3B match to protein family HMM TIGR01613;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84886.1;transl_table=11 CP001843.1 Genbank gene 1976879 1977214 . - . ID=gene1815;Name=TREPR_2262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2262 CP001843.1 Genbank CDS 1976879 1977214 . - 0 ID=cds1726;Parent=gene1815;Dbxref=NCBI_GP:AEF86113.1;Name=AEF86113.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86113.1;transl_table=11 CP001843.1 Genbank gene 1977204 1977425 . - . ID=gene1816;Name=TREPR_2261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2261 CP001843.1 Genbank CDS 1977204 1977425 . - 0 ID=cds1727;Parent=gene1816;Dbxref=NCBI_GP:AEF83733.1;Name=AEF83733.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83733.1;transl_table=11 CP001843.1 Genbank gene 1977404 1977607 . - . ID=gene1817;Name=TREPR_2260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2260 CP001843.1 Genbank CDS 1977404 1977607 . - 0 ID=cds1728;Parent=gene1817;Dbxref=NCBI_GP:AEF85182.1;Name=AEF85182.1;Note=identified by match to protein family HMM TIGR01764;gbkey=CDS;product=phage transcriptional regulator%2C AlpA;protein_id=AEF85182.1;transl_table=11 CP001843.1 Genbank gene 1977682 1978347 . - . ID=gene1818;Name=TREPR_2259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2259 CP001843.1 Genbank CDS 1977682 1978347 . - 0 ID=cds1729;Parent=gene1818;Dbxref=NCBI_GP:AEF85678.1;Name=AEF85678.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85678.1;transl_table=11 CP001843.1 Genbank gene 1978806 1980161 . - . ID=gene1819;Name=TREPR_2258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2258 CP001843.1 Genbank CDS 1978806 1980161 . - 0 ID=cds1730;Parent=gene1819;Dbxref=NCBI_GP:AEF86238.1;Name=AEF86238.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;product=site-specific recombinase%2C phage integrase family;protein_id=AEF86238.1;transl_table=11 CP001843.1 Genbank gene 1980293 1980374 . - . ID=gene1820;Name=TREPR_3926;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3926 CP001843.1 Genbank tRNA 1980293 1980374 . - . ID=rna36;Parent=gene1820;gbkey=tRNA;product=tRNA-Tyr CP001843.1 Genbank exon 1980293 1980374 . - . ID=id41;Parent=rna36;gbkey=tRNA;product=tRNA-Tyr CP001843.1 Genbank gene 1980404 1980476 . - . ID=gene1821;Name=TREPR_3925;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3925 CP001843.1 Genbank tRNA 1980404 1980476 . - . ID=rna37;Parent=gene1821;gbkey=tRNA;product=tRNA-Thr CP001843.1 Genbank exon 1980404 1980476 . - . ID=id42;Parent=rna37;gbkey=tRNA;product=tRNA-Thr CP001843.1 Genbank gene 1980571 1983579 . - . ID=gene1822;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=TREPR_2255 CP001843.1 Genbank CDS 1980571 1983579 . - 0 ID=cds1731;Parent=gene1822;Dbxref=NCBI_GP:AEF86367.1;Name=AEF86367.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326%3B match to protein family HMM PF02896%3B match to protein family HMM TIGR01828;gbkey=CDS;gene=ppdK;product=pyruvate%2C phosphate dikinase;protein_id=AEF86367.1;transl_table=11 CP001843.1 Genbank gene 1983685 1986411 . + . ID=gene1823;Name=TREPR_2253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2253 CP001843.1 Genbank CDS 1983685 1986411 . + 0 ID=cds1732;Parent=gene1823;Dbxref=NCBI_GP:AEF84427.1;Name=AEF84427.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM PF04408%3B match to protein family HMM PF07717;gbkey=CDS;product=Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 (Helicase JA1);protein_id=AEF84427.1;transl_table=11 CP001843.1 Genbank gene 1986437 1987321 . + . ID=gene1824;Name=TREPR_2252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2252 CP001843.1 Genbank CDS 1986437 1987321 . + 0 ID=cds1733;Parent=gene1824;Dbxref=NCBI_GP:AEF86985.1;Name=AEF86985.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86985.1;transl_table=11 CP001843.1 Genbank gene 1987378 1987521 . + . ID=gene1825;Name=TREPR_2251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2251 CP001843.1 Genbank CDS 1987378 1987521 . + 0 ID=cds1734;Parent=gene1825;Dbxref=NCBI_GP:AEF85356.1;Name=AEF85356.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85356.1;transl_table=11 CP001843.1 Genbank gene 1987546 1988097 . - . ID=gene1826;Name=TREPR_2250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2250 CP001843.1 Genbank CDS 1987546 1988097 . - 0 ID=cds1735;Parent=gene1826;Dbxref=NCBI_GP:AEF85033.1;Name=AEF85033.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85033.1;transl_table=11 CP001843.1 Genbank gene 1988127 1989701 . - . ID=gene1827;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=TREPR_2249 CP001843.1 Genbank CDS 1988127 1989701 . - 0 ID=cds1736;Parent=gene1827;Dbxref=NCBI_GP:AEF83565.1;Name=AEF83565.1;Note=identified by match to protein family HMM PF00342;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=AEF83565.1;transl_table=11 CP001843.1 Genbank gene 1989782 1990255 . - . ID=gene1828;Name=TREPR_2248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2248 CP001843.1 Genbank CDS 1989782 1990255 . - 0 ID=cds1737;Parent=gene1828;Dbxref=NCBI_GP:AEF86503.1;Name=AEF86503.1;Note=identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863;gbkey=CDS;product=transcriptional regulator;protein_id=AEF86503.1;transl_table=11 CP001843.1 Genbank gene 1990481 1991872 . + . ID=gene1829;Name=TREPR_2247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2247 CP001843.1 Genbank CDS 1990481 1991872 . + 0 ID=cds1738;Parent=gene1829;Dbxref=NCBI_GP:AEF85271.1;Name=AEF85271.1;Note=identified by match to protein family HMM PF03961;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85271.1;transl_table=11 CP001843.1 Genbank gene 1991844 1991969 . + . ID=gene1830;Name=TREPR_2246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2246 CP001843.1 Genbank CDS 1991844 1991969 . + 0 ID=cds1739;Parent=gene1830;Dbxref=NCBI_GP:AEF84545.1;Name=AEF84545.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84545.1;transl_table=11 CP001843.1 Genbank gene 1992013 1992519 . + . ID=gene1831;Name=TREPR_2245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2245 CP001843.1 Genbank CDS 1992013 1992519 . + 0 ID=cds1740;Parent=gene1831;Dbxref=NCBI_GP:AEF86797.1;Name=AEF86797.1;Note=identified by match to protein family HMM PF05154;gbkey=CDS;product=TM2 domain protein;protein_id=AEF86797.1;transl_table=11 CP001843.1 Genbank gene 1992523 1995207 . - . ID=gene1832;Name=TREPR_2244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2244 CP001843.1 Genbank CDS 1992523 1995207 . - 0 ID=cds1741;Parent=gene1832;Dbxref=NCBI_GP:AEF86074.1;Name=AEF86074.1;Note=identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713;gbkey=CDS;product=MutS2 family protein;protein_id=AEF86074.1;transl_table=11 CP001843.1 Genbank gene 1995200 1996135 . - . ID=gene1833;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=TREPR_2243 CP001843.1 Genbank CDS 1995200 1996135 . - 0 ID=cds1742;Parent=gene1833;Dbxref=NCBI_GP:AEF83970.1;Name=AEF83970.1;Note=identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157;gbkey=CDS;gene=rsgA;product=ribosome small subunit-dependent GTPase A;protein_id=AEF83970.1;transl_table=11 CP001843.1 Genbank gene 1996132 1997025 . - . ID=gene1834;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=TREPR_2242 CP001843.1 Genbank CDS 1996132 1997025 . - 0 ID=cds1743;Parent=gene1834;Dbxref=NCBI_GP:AEF84925.1;Name=AEF84925.1;Note=identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067;gbkey=CDS;gene=murI;product=glutamate racemase;protein_id=AEF84925.1;transl_table=11 CP001843.1 Genbank gene 1997031 1997423 . - . ID=gene1835;Name=TREPR_2241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2241 CP001843.1 Genbank CDS 1997031 1997423 . - 0 ID=cds1744;Parent=gene1835;Dbxref=NCBI_GP:AEF86355.1;Name=AEF86355.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86355.1;transl_table=11 CP001843.1 Genbank gene 1997444 1998037 . + . ID=gene1836;Name=TREPR_2240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2240 CP001843.1 Genbank CDS 1997444 1998037 . + 0 ID=cds1745;Parent=gene1836;Dbxref=NCBI_GP:AEF83797.1;Name=AEF83797.1;Note=identified by match to protein family HMM PF00805;gbkey=CDS;product=pentapeptide repeat family protein;protein_id=AEF83797.1;transl_table=11 CP001843.1 Genbank gene 1998038 1998757 . + . ID=gene1837;Name=TREPR_2238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2238 CP001843.1 Genbank CDS 1998038 1998757 . + 0 ID=cds1746;Parent=gene1837;Dbxref=NCBI_GP:AEF84445.1;Name=AEF84445.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;product=hydroxyacylglutathione hydrolase (Glyoxalase II) (GlxII);protein_id=AEF84445.1;transl_table=11 CP001843.1 Genbank gene 1998754 2000472 . - . ID=gene1838;Name=TREPR_2239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2239 CP001843.1 Genbank CDS 1998754 2000472 . - 0 ID=cds1747;Parent=gene1838;Dbxref=NCBI_GP:AEF83648.1;Name=AEF83648.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83648.1;transl_table=11 CP001843.1 Genbank gene 2000484 2001263 . - . ID=gene1839;Name=TREPR_2237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2237 CP001843.1 Genbank CDS 2000484 2001263 . - 0 ID=cds1748;Parent=gene1839;Dbxref=NCBI_GP:AEF85785.1;Name=AEF85785.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85785.1;transl_table=11 CP001843.1 Genbank gene 2001335 2001994 . + . ID=gene1840;Name=TREPR_2236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2236 CP001843.1 Genbank CDS 2001335 2001994 . + 0 ID=cds1749;Parent=gene1840;Dbxref=NCBI_GP:AEF87022.1;Name=AEF87022.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF87022.1;transl_table=11 CP001843.1 Genbank gene 2001994 2002293 . + . ID=gene1841;Name=TREPR_2235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2235 CP001843.1 Genbank CDS 2001994 2002293 . + 0 ID=cds1750;Parent=gene1841;Dbxref=NCBI_GP:AEF85057.1;Name=AEF85057.1;Note=identified by match to protein family HMM PF02594;gbkey=CDS;product=protein C15orf40;protein_id=AEF85057.1;transl_table=11 CP001843.1 Genbank gene 2002419 2002595 . + . ID=gene1842;Name=TREPR_2234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2234 CP001843.1 Genbank CDS 2002419 2002595 . + 0 ID=cds1751;Parent=gene1842;Dbxref=NCBI_GP:AEF84383.1;Name=AEF84383.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84383.1;transl_table=11 CP001843.1 Genbank gene 2003059 2003910 . + . ID=gene1843;Name=TREPR_2233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2233 CP001843.1 Genbank CDS 2003059 2003910 . + 0 ID=cds1752;Parent=gene1843;Dbxref=NCBI_GP:AEF86470.1;Name=AEF86470.1;Note=identified by match to protein family HMM PF03269;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86470.1;transl_table=11 CP001843.1 Genbank gene 2004164 2004745 . + . ID=gene1844;Name=TREPR_2232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2232 CP001843.1 Genbank CDS 2004164 2004745 . + 0 ID=cds1753;Parent=gene1844;Dbxref=NCBI_GP:AEF83704.1;Name=AEF83704.1;Note=identified by match to protein family HMM PF00226;gbkey=CDS;product=putative tetratricopeptide repeat protein;protein_id=AEF83704.1;transl_table=11 CP001843.1 Genbank gene 2004750 2006117 . - . ID=gene1845;Name=TREPR_2231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2231 CP001843.1 Genbank CDS 2004750 2006117 . - 0 ID=cds1754;Parent=gene1845;Dbxref=NCBI_GP:AEF84502.1;Name=AEF84502.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84502.1;transl_table=11 CP001843.1 Genbank gene 2006169 2006792 . - . ID=gene1846;Name=TREPR_2230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2230 CP001843.1 Genbank CDS 2006169 2006792 . - 0 ID=cds1755;Parent=gene1846;Dbxref=NCBI_GP:AEF86838.1;Name=AEF86838.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86838.1;transl_table=11 CP001843.1 Genbank gene 2006893 2008251 . - . ID=gene1847;Name=TREPR_2229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2229 CP001843.1 Genbank CDS 2006893 2008251 . - 0 ID=cds1756;Parent=gene1847;Dbxref=NCBI_GP:AEF84051.1;Name=AEF84051.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728;gbkey=CDS;product=acetoacetate metabolism regulatory protein AtoC (Ornithine/argininedecarboxylase inhibitor) (Ornithine decarboxylase antizyme);protein_id=AEF84051.1;transl_table=11 CP001843.1 Genbank gene 2008251 2009471 . - . ID=gene1848;Name=TREPR_2228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2228 CP001843.1 Genbank CDS 2008251 2009471 . - 0 ID=cds1757;Parent=gene1848;Dbxref=NCBI_GP:AEF85996.1;Name=AEF85996.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229;gbkey=CDS;product=sensory box histidine kinase;protein_id=AEF85996.1;transl_table=11 CP001843.1 Genbank gene 2009704 2011104 . - . ID=gene1849;Name=TREPR_2227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2227 CP001843.1 Genbank CDS 2009704 2011104 . - 0 ID=cds1758;Parent=gene1849;Dbxref=NCBI_GP:AEF85438.1;Name=AEF85438.1;Note=identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711;gbkey=CDS;product=transport protein;protein_id=AEF85438.1;transl_table=11 CP001843.1 Genbank gene 2011343 2011795 . + . ID=gene1850;Name=TREPR_2226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2226 CP001843.1 Genbank CDS 2011343 2011795 . + 0 ID=cds1759;Parent=gene1850;Dbxref=NCBI_GP:AEF86215.1;Name=AEF86215.1;gbkey=CDS;product=anti-sigma regulatory factor;protein_id=AEF86215.1;transl_table=11 CP001843.1 Genbank gene 2011862 2012434 . + . ID=gene1851;Name=TREPR_2225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2225 CP001843.1 Genbank CDS 2011862 2012434 . + 0 ID=cds1760;Parent=gene1851;Dbxref=NCBI_GP:AEF83942.1;Name=AEF83942.1;Note=identified by match to protein family HMM PF01740;gbkey=CDS;product=anti-sigma F factor antagonist;protein_id=AEF83942.1;transl_table=11 CP001843.1 Genbank gene 2012460 2014028 . - . ID=gene1852;Name=TREPR_2224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2224 CP001843.1 Genbank CDS 2012460 2014028 . - 0 ID=cds1761;Parent=gene1852;Dbxref=NCBI_GP:AEF84649.1;Name=AEF84649.1;Note=identified by match to protein family HMM PF00672%3B match to protein family HMM PF07228;gbkey=CDS;product=serine phosphatase;protein_id=AEF84649.1;transl_table=11 CP001843.1 Genbank gene 2014041 2015408 . - . ID=gene1853;Name=TREPR_2223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2223 CP001843.1 Genbank CDS 2014041 2015408 . - 0 ID=cds1762;Parent=gene1853;Dbxref=NCBI_GP:AEF85074.1;Name=AEF85074.1;gbkey=CDS;product=DNA polymerase III domain protein;protein_id=AEF85074.1;transl_table=11 CP001843.1 Genbank gene 2015401 2015901 . - . ID=gene1854;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=TREPR_2222 CP001843.1 Genbank CDS 2015401 2015901 . - 0 ID=cds1763;Parent=gene1854;Dbxref=NCBI_GP:AEF85883.1;Name=AEF85883.1;Note=identified by match to protein family HMM PF02674;gbkey=CDS;gene=cvpA;product=CvpA family protein;protein_id=AEF85883.1;transl_table=11 CP001843.1 Genbank gene 2015898 2017055 . - . ID=gene1855;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=TREPR_2221 CP001843.1 Genbank CDS 2015898 2017055 . - 0 ID=cds1764;Parent=gene1855;Dbxref=NCBI_GP:AEF86362.1;Name=AEF86362.1;Note=identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01133;gbkey=CDS;gene=murG;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=AEF86362.1;transl_table=11 CP001843.1 Genbank gene 2017126 2017689 . - . ID=gene1856;Name=TREPR_2220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2220 CP001843.1 Genbank CDS 2017126 2017689 . - 0 ID=cds1765;Parent=gene1856;Dbxref=NCBI_GP:AEF83634.1;Name=AEF83634.1;Note=identified by match to protein family HMM PF03358;gbkey=CDS;product=probable NADPH:quinone oxidoreductase 2;protein_id=AEF83634.1;transl_table=11 CP001843.1 Genbank gene 2017878 2018852 . + . ID=gene1857;Name=TREPR_2219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2219 CP001843.1 Genbank CDS 2017878 2018852 . + 0 ID=cds1766;Parent=gene1857;Dbxref=NCBI_GP:AEF84485.1;Name=AEF84485.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84485.1;transl_table=11 CP001843.1 Genbank gene 2018849 2019586 . + . ID=gene1858;Name=TREPR_2218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2218 CP001843.1 Genbank CDS 2018849 2019586 . + 0 ID=cds1767;Parent=gene1858;Dbxref=NCBI_GP:AEF85525.1;Name=AEF85525.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85525.1;transl_table=11 CP001843.1 Genbank gene 2019633 2020481 . - . ID=gene1859;Name=TREPR_2217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2217 CP001843.1 Genbank CDS 2019633 2020481 . - 0 ID=cds1768;Parent=gene1859;Dbxref=NCBI_GP:AEF84112.1;Name=AEF84112.1;Note=identified by match to protein family HMM PF01026;gbkey=CDS;product=hydrolase%2C TatD family;protein_id=AEF84112.1;transl_table=11 CP001843.1 Genbank gene 2020559 2021995 . - . ID=gene1860;Name=TREPR_2216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2216 CP001843.1 Genbank CDS 2020559 2021995 . - 0 ID=cds1769;Parent=gene1860;Dbxref=NCBI_GP:AEF84858.1;Name=AEF84858.1;Note=identified by match to protein family HMM PF01640;gbkey=CDS;product=putative pyrogenic exotoxin B;protein_id=AEF84858.1;transl_table=11 CP001843.1 Genbank gene 2022197 2023624 . + . ID=gene1861;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=TREPR_2215 CP001843.1 Genbank CDS 2022197 2023624 . + 0 ID=cds1770;Parent=gene1861;Dbxref=NCBI_GP:AEF85577.1;Name=AEF85577.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00457;gbkey=CDS;gene=asnS;product=asparagine--tRNA ligase;protein_id=AEF85577.1;transl_table=11 CP001843.1 Genbank gene 2023630 2024949 . + . ID=gene1862;Name=TREPR_2214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2214 CP001843.1 Genbank CDS 2023630 2024949 . + 0 ID=cds1771;Parent=gene1862;Dbxref=NCBI_GP:AEF86605.1;Name=AEF86605.1;Note=identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943;gbkey=CDS;product=serine-type D-Ala-D-Ala carboxypeptidase DacC;protein_id=AEF86605.1;transl_table=11 CP001843.1 Genbank gene 2024954 2025148 . - . ID=gene1863;Name=TREPR_2213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2213 CP001843.1 Genbank CDS 2024954 2025148 . - 0 ID=cds1772;Parent=gene1863;Dbxref=NCBI_GP:AEF85494.1;Name=AEF85494.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85494.1;transl_table=11 CP001843.1 Genbank gene 2025198 2025323 . - . ID=gene1864;Name=TREPR_2212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2212 CP001843.1 Genbank CDS 2025198 2025323 . - 0 ID=cds1773;Parent=gene1864;Dbxref=NCBI_GP:AEF86187.1;Name=AEF86187.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86187.1;transl_table=11 CP001843.1 Genbank gene 2025407 2026687 . - . ID=gene1865;Name=TREPR_2211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2211 CP001843.1 Genbank CDS 2025407 2026687 . - 0 ID=cds1774;Parent=gene1865;Dbxref=NCBI_GP:AEF83917.1;Name=AEF83917.1;Note=identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551;gbkey=CDS;product=LysM domain/M23/M37 peptidase domain protein;protein_id=AEF83917.1;transl_table=11 CP001843.1 Genbank gene 2026741 2027154 . + . ID=gene1866;Name=lepB_3;gbkey=Gene;gene=lepB_3;gene_biotype=protein_coding;locus_tag=TREPR_2210 CP001843.1 Genbank CDS 2026741 2027154 . + 0 ID=cds1775;Parent=gene1866;Dbxref=NCBI_GP:AEF84716.1;Name=AEF84716.1;Note=identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227;gbkey=CDS;gene=lepB_3;product=signal peptidase I;protein_id=AEF84716.1;transl_table=11 CP001843.1 Genbank gene 2027151 2029043 . + . ID=gene1867;Name=TREPR_2209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2209 CP001843.1 Genbank CDS 2027151 2029043 . + 0 ID=cds1776;Parent=gene1867;Dbxref=NCBI_GP:AEF85321.1;Name=AEF85321.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793;gbkey=CDS;product=penicillin-binding protein;protein_id=AEF85321.1;transl_table=11 CP001843.1 Genbank gene 2029030 2030928 . + . ID=gene1868;Name=TREPR_2208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2208 CP001843.1 Genbank CDS 2029030 2030928 . + 0 ID=cds1777;Parent=gene1868;Dbxref=NCBI_GP:AEF86295.1;Name=AEF86295.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86295.1;transl_table=11 CP001843.1 Genbank gene 2031219 2032406 . + . ID=gene1869;Name=TREPR_2206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2206 CP001843.1 Genbank CDS 2031219 2032406 . + 0 ID=cds1778;Parent=gene1869;Dbxref=NCBI_GP:AEF85374.1;Name=AEF85374.1;Note=identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899;gbkey=CDS;product=phage integrase family protein;protein_id=AEF85374.1;transl_table=11 CP001843.1 Genbank gene 2032661 2033203 . + . ID=gene1870;Name=TREPR_2204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2204 CP001843.1 Genbank CDS 2032661 2033203 . + 0 ID=cds1779;Parent=gene1870;Dbxref=NCBI_GP:AEF84264.1;Name=AEF84264.1;Note=identified by match to protein family HMM PF09346;gbkey=CDS;product=SMI1/KNR4 family protein;protein_id=AEF84264.1;transl_table=11 CP001843.1 Genbank gene 2033446 2034636 . + . ID=gene1871;Name=TREPR_2203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2203 CP001843.1 Genbank CDS 2033446 2034636 . + 0 ID=cds1780;Parent=gene1871;Dbxref=NCBI_GP:AEF85792.1;Name=AEF85792.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85792.1;transl_table=11 CP001843.1 Genbank pseudogene 2034900 2035307 . + . ID=gene1872;Name=TREPR_2202;Note=iron-sulfur cluster-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2202;pseudo=true CP001843.1 Genbank pseudogene 2035460 2035759 . + . ID=gene1873;Name=TREPR_2201;Note=4Fe-4S ferredoxin%2C iron-sulfur binding domain protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2201;pseudo=true CP001843.1 Genbank gene 2036195 2037775 . - . ID=gene1874;Name=TREPR_2200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2200 CP001843.1 Genbank CDS 2036195 2037775 . - 0 ID=cds1781;Parent=gene1874;Dbxref=NCBI_GP:AEF83910.1;Name=AEF83910.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83910.1;transl_table=11 CP001843.1 Genbank gene 2039179 2040573 . - . ID=gene1875;Name=TREPR_2198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2198 CP001843.1 Genbank CDS 2039179 2040573 . - 0 ID=cds1782;Parent=gene1875;Dbxref=NCBI_GP:AEF83780.1;Name=AEF83780.1;Note=identified by match to protein family HMM PF08706%3B match to protein family HMM TIGR01613;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83780.1;transl_table=11 CP001843.1 Genbank gene 2040638 2040976 . - . ID=gene1876;Name=TREPR_2197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2197 CP001843.1 Genbank CDS 2040638 2040976 . - 0 ID=cds1783;Parent=gene1876;Dbxref=NCBI_GP:AEF86337.1;Name=AEF86337.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86337.1;transl_table=11 CP001843.1 Genbank gene 2040976 2041269 . - . ID=gene1877;Name=TREPR_2196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2196 CP001843.1 Genbank CDS 2040976 2041269 . - 0 ID=cds1784;Parent=gene1877;Dbxref=NCBI_GP:AEF85336.1;Name=AEF85336.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85336.1;transl_table=11 CP001843.1 Genbank gene 2041280 2043082 . - . ID=gene1878;Name=TREPR_2195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2195 CP001843.1 Genbank CDS 2041280 2043082 . - 0 ID=cds1785;Parent=gene1878;Dbxref=NCBI_GP:AEF85237.1;Name=AEF85237.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85237.1;transl_table=11 CP001843.1 Genbank gene 2043079 2043630 . - . ID=gene1879;Name=TREPR_2194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2194 CP001843.1 Genbank CDS 2043079 2043630 . - 0 ID=cds1786;Parent=gene1879;Dbxref=NCBI_GP:AEF85138.1;Name=AEF85138.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85138.1;transl_table=11 CP001843.1 Genbank gene 2043631 2043912 . - . ID=gene1880;Name=TREPR_2193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2193 CP001843.1 Genbank CDS 2043631 2043912 . - 0 ID=cds1787;Parent=gene1880;Dbxref=NCBI_GP:AEF85425.1;Name=AEF85425.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85425.1;transl_table=11 CP001843.1 Genbank gene 2043872 2044159 . - . ID=gene1881;Name=TREPR_2192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2192 CP001843.1 Genbank CDS 2043872 2044159 . - 0 ID=cds1788;Parent=gene1881;Dbxref=NCBI_GP:AEF84566.1;Name=AEF84566.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84566.1;transl_table=11 CP001843.1 Genbank gene 2044152 2044418 . - . ID=gene1882;Name=TREPR_2191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2191 CP001843.1 Genbank CDS 2044152 2044418 . - 0 ID=cds1789;Parent=gene1882;Dbxref=NCBI_GP:AEF85199.1;Name=AEF85199.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85199.1;transl_table=11 CP001843.1 Genbank gene 2044429 2044596 . - . ID=gene1883;Name=TREPR_2190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2190 CP001843.1 Genbank CDS 2044429 2044596 . - 0 ID=cds1790;Parent=gene1883;Dbxref=NCBI_GP:AEF84246.1;Name=AEF84246.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84246.1;transl_table=11 CP001843.1 Genbank gene 2044599 2045153 . - . ID=gene1884;Name=TREPR_2189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2189 CP001843.1 Genbank CDS 2044599 2045153 . - 0 ID=cds1791;Parent=gene1884;Dbxref=NCBI_GP:AEF85100.1;Name=AEF85100.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85100.1;transl_table=11 CP001843.1 Genbank gene 2045275 2045541 . - . ID=gene1885;Name=TREPR_2188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2188 CP001843.1 Genbank CDS 2045275 2045541 . - 0 ID=cds1792;Parent=gene1885;Dbxref=NCBI_GP:AEF84052.1;Name=AEF84052.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84052.1;transl_table=11 CP001843.1 Genbank gene 2045551 2047047 . - . ID=gene1886;Name=TREPR_2187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2187 CP001843.1 Genbank CDS 2045551 2047047 . - 0 ID=cds1793;Parent=gene1886;Dbxref=NCBI_GP:AEF86788.1;Name=AEF86788.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86788.1;transl_table=11 CP001843.1 Genbank gene 2047044 2047907 . - . ID=gene1887;Name=TREPR_2186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2186 CP001843.1 Genbank CDS 2047044 2047907 . - 0 ID=cds1794;Parent=gene1887;Dbxref=NCBI_GP:AEF85605.1;Name=AEF85605.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85605.1;transl_table=11 CP001843.1 Genbank gene 2047904 2048341 . - . ID=gene1888;Name=TREPR_2185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2185 CP001843.1 Genbank CDS 2047904 2048341 . - 0 ID=cds1795;Parent=gene1888;Dbxref=NCBI_GP:AEF84767.1;Name=AEF84767.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84767.1;transl_table=11 CP001843.1 Genbank gene 2048338 2048946 . - . ID=gene1889;Name=TREPR_2184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2184 CP001843.1 Genbank CDS 2048338 2048946 . - 0 ID=cds1796;Parent=gene1889;Dbxref=NCBI_GP:AEF83750.1;Name=AEF83750.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83750.1;transl_table=11 CP001843.1 Genbank gene 2049061 2049213 . + . ID=gene1890;Name=TREPR_2183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2183 CP001843.1 Genbank CDS 2049061 2049213 . + 0 ID=cds1797;Parent=gene1890;Dbxref=NCBI_GP:AEF86896.1;Name=AEF86896.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86896.1;transl_table=11 CP001843.1 Genbank gene 2049217 2049771 . + . ID=gene1891;Name=TREPR_2182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2182 CP001843.1 Genbank CDS 2049217 2049771 . + 0 ID=cds1798;Parent=gene1891;Dbxref=NCBI_GP:AEF85320.1;Name=AEF85320.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85320.1;transl_table=11 CP001843.1 Genbank gene 2050038 2050190 . + . ID=gene1892;Name=TREPR_2181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2181 CP001843.1 Genbank CDS 2050038 2050190 . + 0 ID=cds1799;Parent=gene1892;Dbxref=NCBI_GP:AEF84924.1;Name=AEF84924.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84924.1;transl_table=11 CP001843.1 Genbank gene 2050242 2050808 . + . ID=gene1893;Name=TREPR_2180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2180 CP001843.1 Genbank CDS 2050242 2050808 . + 0 ID=cds1800;Parent=gene1893;Dbxref=NCBI_GP:AEF83731.1;Name=AEF83731.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=transcriptional regulator%2C TetR family;protein_id=AEF83731.1;transl_table=11 CP001843.1 Genbank gene 2050893 2051714 . + . ID=gene1894;Name=TREPR_2179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2179 CP001843.1 Genbank CDS 2050893 2051714 . + 0 ID=cds1801;Parent=gene1894;Dbxref=NCBI_GP:AEF83770.1;Name=AEF83770.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=4Fe-4S binding domain protein;protein_id=AEF83770.1;transl_table=11 CP001843.1 Genbank gene 2051711 2052364 . + . ID=gene1895;Name=TREPR_2178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2178 CP001843.1 Genbank CDS 2051711 2052364 . + 0 ID=cds1802;Parent=gene1895;Dbxref=NCBI_GP:AEF86527.1;Name=AEF86527.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86527.1;transl_table=11 CP001843.1 Genbank gene 2052383 2053180 . + . ID=gene1896;Name=TREPR_2177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2177 CP001843.1 Genbank CDS 2052383 2053180 . + 0 ID=cds1803;Parent=gene1896;Dbxref=NCBI_GP:AEF84842.1;Name=AEF84842.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659;gbkey=CDS;product=short chain dehydrogenase;protein_id=AEF84842.1;transl_table=11 CP001843.1 Genbank gene 2053336 2054565 . - . ID=gene1897;Name=TREPR_2176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2176 CP001843.1 Genbank CDS 2053336 2054565 . - 0 ID=cds1804;Parent=gene1897;Dbxref=NCBI_GP:AEF84688.1;Name=AEF84688.1;Note=identified by match to protein family HMM PF00872;gbkey=CDS;product=transposase%2C Mutator family;protein_id=AEF84688.1;transl_table=11 CP001843.1 Genbank gene 2055137 2056057 . + . ID=gene1898;Name=TREPR_2173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2173 CP001843.1 Genbank CDS 2055137 2056057 . + 0 ID=cds1805;Parent=gene1898;Dbxref=NCBI_GP:AEF85254.1;Name=AEF85254.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85254.1;transl_table=11 CP001843.1 Genbank gene 2056341 2056568 . + . ID=gene1899;Name=TREPR_2172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2172 CP001843.1 Genbank CDS 2056341 2056568 . + 0 ID=cds1806;Parent=gene1899;Dbxref=NCBI_GP:AEF84464.1;Name=AEF84464.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84464.1;transl_table=11 CP001843.1 Genbank gene 2056565 2056894 . + . ID=gene1900;Name=TREPR_2171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2171 CP001843.1 Genbank CDS 2056565 2056894 . + 0 ID=cds1807;Parent=gene1900;Dbxref=NCBI_GP:AEF86784.1;Name=AEF86784.1;Note=identified by match to protein family HMM PF02452;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86784.1;transl_table=11 CP001843.1 Genbank gene 2057000 2057131 . + . ID=gene1901;Name=TREPR_2170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2170 CP001843.1 Genbank CDS 2057000 2057131 . + 0 ID=cds1808;Parent=gene1901;Dbxref=NCBI_GP:AEF85825.1;Name=AEF85825.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85825.1;transl_table=11 CP001843.1 Genbank gene 2057179 2057415 . + . ID=gene1902;Name=TREPR_2169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2169 CP001843.1 Genbank CDS 2057179 2057415 . + 0 ID=cds1809;Parent=gene1902;Dbxref=NCBI_GP:AEF85603.1;Name=AEF85603.1;gbkey=CDS;product=MobC;protein_id=AEF85603.1;transl_table=11 CP001843.1 Genbank gene 2057418 2058023 . + . ID=gene1903;Name=TREPR_2168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2168 CP001843.1 Genbank CDS 2057418 2058023 . + 0 ID=cds1810;Parent=gene1903;Dbxref=NCBI_GP:AEF84631.1;Name=AEF84631.1;Note=identified by match to protein family HMM PF02661;gbkey=CDS;product=Fic protein family;protein_id=AEF84631.1;transl_table=11 CP001843.1 Genbank gene 2058030 2058143 . - . ID=gene1904;Name=TREPR_2167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2167 CP001843.1 Genbank CDS 2058030 2058143 . - 0 ID=cds1811;Parent=gene1904;Dbxref=NCBI_GP:AEF83859.1;Name=AEF83859.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83859.1;transl_table=11 CP001843.1 Genbank pseudogene 2058322 2059512 . + . ID=gene1905;Name=TREPR_2166;Note=hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2166;pseudo=true CP001843.1 Genbank gene 2059780 2060406 . + . ID=gene1906;Name=TREPR_2164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2164 CP001843.1 Genbank CDS 2059780 2060406 . + 0 ID=cds1812;Parent=gene1906;Dbxref=NCBI_GP:AEF83642.1;Name=AEF83642.1;Note=identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;product=SAM-dependent methyltransferase%2C UbiE family;protein_id=AEF83642.1;transl_table=11 CP001843.1 Genbank gene 2060695 2060835 . + . ID=gene1907;Name=TREPR_2163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2163 CP001843.1 Genbank CDS 2060695 2060835 . + 0 ID=cds1813;Parent=gene1907;Dbxref=NCBI_GP:AEF85598.1;Name=AEF85598.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85598.1;transl_table=11 CP001843.1 Genbank gene 2061251 2061517 . + . ID=gene1908;Name=TREPR_2161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2161 CP001843.1 Genbank CDS 2061251 2061517 . + 0 ID=cds1814;Parent=gene1908;Dbxref=NCBI_GP:AEF83631.1;Name=AEF83631.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83631.1;transl_table=11 CP001843.1 Genbank gene 2061714 2061992 . + . ID=gene1909;Name=TREPR_2160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2160 CP001843.1 Genbank CDS 2061714 2061992 . + 0 ID=cds1815;Parent=gene1909;Dbxref=NCBI_GP:AEF84505.1;Name=AEF84505.1;Note=identified by match to protein family HMM PF02604%3B match to protein family HMM TIGR01552;gbkey=CDS;product=prevent host death protein Phd;protein_id=AEF84505.1;transl_table=11 CP001843.1 Genbank gene 2061994 2062329 . + . ID=gene1910;Name=TREPR_2159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2159 CP001843.1 Genbank CDS 2061994 2062329 . + 0 ID=cds1816;Parent=gene1910;Dbxref=NCBI_GP:AEF86892.1;Name=AEF86892.1;Note=identified by match to protein family HMM PF05016;gbkey=CDS;product=putative plasmid stabilization system protein;protein_id=AEF86892.1;transl_table=11 CP001843.1 Genbank gene 2062418 2062540 . - . ID=gene1911;Name=TREPR_2158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2158 CP001843.1 Genbank CDS 2062418 2062540 . - 0 ID=cds1817;Parent=gene1911;Dbxref=NCBI_GP:AEF84291.1;Name=AEF84291.1;gbkey=CDS;product=transposase%2C mutator family;protein_id=AEF84291.1;transl_table=11 CP001843.1 Genbank gene 2062643 2063857 . - . ID=gene1912;Name=TREPR_2157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2157 CP001843.1 Genbank CDS 2062643 2063857 . - 0 ID=cds1818;Parent=gene1912;Dbxref=NCBI_GP:AEF84407.1;Name=AEF84407.1;Note=identified by match to protein family HMM PF00872;gbkey=CDS;product=transposase%2C Mutator family;protein_id=AEF84407.1;transl_table=11 CP001843.1 Genbank pseudogene 2063886 2064119 . - . ID=gene1913;Name=tnpA;Note=ISSod4%2C transposase%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=TREPR_2156;pseudo=true CP001843.1 Genbank pseudogene 2064134 2064817 . - . ID=gene1914;Name=TREPR_2155;Note=transposase%2C Mutator family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00872;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2155;pseudo=true CP001843.1 Genbank gene 2064988 2065221 . - . ID=gene1915;Name=TREPR_2154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2154 CP001843.1 Genbank CDS 2064988 2065221 . - 0 ID=cds1819;Parent=gene1915;Dbxref=NCBI_GP:AEF84756.1;Name=AEF84756.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84756.1;transl_table=11 CP001843.1 Genbank gene 2065544 2066710 . + . ID=gene1916;Name=TREPR_2153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2153 CP001843.1 Genbank CDS 2065544 2066710 . + 0 ID=cds1820;Parent=gene1916;Dbxref=NCBI_GP:AEF86740.1;Name=AEF86740.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=HD domain protein;protein_id=AEF86740.1;transl_table=11 CP001843.1 Genbank gene 2066715 2068064 . + . ID=gene1917;Name=TREPR_2152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2152 CP001843.1 Genbank CDS 2066715 2068064 . + 0 ID=cds1821;Parent=gene1917;Dbxref=NCBI_GP:AEF86719.1;Name=AEF86719.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86719.1;transl_table=11 CP001843.1 Genbank gene 2068075 2069247 . - . ID=gene1918;Name=TREPR_2151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2151 CP001843.1 Genbank CDS 2068075 2069247 . - 0 ID=cds1822;Parent=gene1918;Dbxref=NCBI_GP:AEF84612.1;Name=AEF84612.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;product=ATP-dependent RNA helicase;protein_id=AEF84612.1;transl_table=11 CP001843.1 Genbank pseudogene 2069258 2069551 . - . ID=gene1919;Name=TREPR_2150;Note=glycosyltransferase%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2150;pseudo=true CP001843.1 Genbank pseudogene 2069508 2070413 . - . ID=gene1920;Name=TREPR_2149;Note=glycosyltransferase%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2149;pseudo=true CP001843.1 Genbank gene 2070559 2072022 . + . ID=gene1921;Name=TREPR_2148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2148 CP001843.1 Genbank CDS 2070559 2072022 . + 0 ID=cds1823;Parent=gene1921;Dbxref=NCBI_GP:AEF86826.1;Name=AEF86826.1;Note=identified by match to protein family HMM PF00474;gbkey=CDS;product=SSS sodium solute transporter superfamily;protein_id=AEF86826.1;transl_table=11 CP001843.1 Genbank gene 2072103 2073776 . + . ID=gene1922;Name=TREPR_2147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2147 CP001843.1 Genbank CDS 2072103 2073776 . + 0 ID=cds1824;Parent=gene1922;Dbxref=NCBI_GP:AEF83742.1;Name=AEF83742.1;Note=identified by match to protein family HMM PF01855%3B match to protein family HMM PF02775;gbkey=CDS;product=indolepyruvate oxidoreductase subunit IorA (IOR)(Indolepyruvate ferredoxin oxidoreductase subunit alpha);protein_id=AEF83742.1;transl_table=11 CP001843.1 Genbank gene 2073773 2074360 . + . ID=gene1923;Name=TREPR_2146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2146 CP001843.1 Genbank CDS 2073773 2074360 . + 0 ID=cds1825;Parent=gene1923;Dbxref=NCBI_GP:AEF84840.1;Name=AEF84840.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;product=indolepyruvate oxidoreductase subunit IorB (IOR)(Indolepyruvate ferredoxin oxidoreductase subunit beta);protein_id=AEF84840.1;transl_table=11 CP001843.1 Genbank gene 2074357 2075703 . + . ID=gene1924;Name=TREPR_2145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2145 CP001843.1 Genbank CDS 2074357 2075703 . + 0 ID=cds1826;Parent=gene1924;Dbxref=NCBI_GP:AEF86069.1;Name=AEF86069.1;gbkey=CDS;product=phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase);protein_id=AEF86069.1;transl_table=11 CP001843.1 Genbank gene 2076037 2077044 . + . ID=gene1925;Name=TREPR_2143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2143 CP001843.1 Genbank CDS 2076037 2077044 . + 0 ID=cds1827;Parent=gene1925;Dbxref=NCBI_GP:AEF86278.1;Name=AEF86278.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86278.1;transl_table=11 CP001843.1 Genbank gene 2077096 2078307 . + . ID=gene1926;Name=TREPR_2142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2142 CP001843.1 Genbank CDS 2077096 2078307 . + 0 ID=cds1828;Parent=gene1926;Dbxref=NCBI_GP:AEF85872.1;Name=AEF85872.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF85872.1;transl_table=11 CP001843.1 Genbank gene 2078351 2079358 . + . ID=gene1927;Name=TREPR_2141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2141 CP001843.1 Genbank CDS 2078351 2079358 . + 0 ID=cds1829;Parent=gene1927;Dbxref=NCBI_GP:AEF84628.1;Name=AEF84628.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84628.1;transl_table=11 CP001843.1 Genbank gene 2079389 2080600 . + . ID=gene1928;Name=TREPR_2140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2140 CP001843.1 Genbank CDS 2079389 2080600 . + 0 ID=cds1830;Parent=gene1928;Dbxref=NCBI_GP:AEF84373.1;Name=AEF84373.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF84373.1;transl_table=11 CP001843.1 Genbank gene 2080671 2081891 . + . ID=gene1929;Name=TREPR_2139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2139 CP001843.1 Genbank CDS 2080671 2081891 . + 0 ID=cds1831;Parent=gene1929;Dbxref=NCBI_GP:AEF86704.1;Name=AEF86704.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF86704.1;transl_table=11 CP001843.1 Genbank gene 2081888 2082724 . + . ID=gene1930;Name=TREPR_2138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2138 CP001843.1 Genbank CDS 2081888 2082724 . + 0 ID=cds1832;Parent=gene1930;Dbxref=NCBI_GP:AEF86221.1;Name=AEF86221.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=taurine import ATP-binding protein TauB;protein_id=AEF86221.1;transl_table=11 CP001843.1 Genbank gene 2082740 2083507 . + . ID=gene1931;Name=TREPR_2137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2137 CP001843.1 Genbank CDS 2082740 2083507 . + 0 ID=cds1833;Parent=gene1931;Dbxref=NCBI_GP:AEF85461.1;Name=AEF85461.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=taurine ABC transporter%2C permease protein;protein_id=AEF85461.1;transl_table=11 CP001843.1 Genbank gene 2083545 2084576 . + . ID=gene1932;Name=TREPR_2136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2136 CP001843.1 Genbank CDS 2083545 2084576 . + 0 ID=cds1834;Parent=gene1932;Dbxref=NCBI_GP:AEF84627.1;Name=AEF84627.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84627.1;transl_table=11 CP001843.1 Genbank gene 2084623 2085621 . + . ID=gene1933;Name=TREPR_2135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2135 CP001843.1 Genbank CDS 2084623 2085621 . + 0 ID=cds1835;Parent=gene1933;Dbxref=NCBI_GP:AEF83934.1;Name=AEF83934.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83934.1;transl_table=11 CP001843.1 Genbank gene 2085635 2087131 . + . ID=gene1934;Name=TREPR_2134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2134 CP001843.1 Genbank CDS 2085635 2087131 . + 0 ID=cds1836;Parent=gene1934;Dbxref=NCBI_GP:AEF86693.1;Name=AEF86693.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86693.1;transl_table=11 CP001843.1 Genbank gene 2087143 2088540 . + . ID=gene1935;Name=TREPR_2133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2133 CP001843.1 Genbank CDS 2087143 2088540 . + 0 ID=cds1837;Parent=gene1935;Dbxref=NCBI_GP:AEF86083.1;Name=AEF86083.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86083.1;transl_table=11 CP001843.1 Genbank gene 2088512 2088625 . + . ID=gene1936;Name=TREPR_2132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2132 CP001843.1 Genbank CDS 2088512 2088625 . + 0 ID=cds1838;Parent=gene1936;Dbxref=NCBI_GP:AEF87037.1;Name=AEF87037.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF87037.1;transl_table=11 CP001843.1 Genbank gene 2088643 2090208 . + . ID=gene1937;Name=TREPR_2131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2131 CP001843.1 Genbank CDS 2088643 2090208 . + 0 ID=cds1839;Parent=gene1937;Dbxref=NCBI_GP:AEF84069.1;Name=AEF84069.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=oligopeptide ABC transporter%2C oligopeptide- binding protein;protein_id=AEF84069.1;transl_table=11 CP001843.1 Genbank gene 2090230 2091183 . + . ID=gene1938;Name=TREPR_2130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2130 CP001843.1 Genbank CDS 2090230 2091183 . + 0 ID=cds1840;Parent=gene1938;Dbxref=NCBI_GP:AEF84979.1;Name=AEF84979.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein AppB;protein_id=AEF84979.1;transl_table=11 CP001843.1 Genbank gene 2091193 2092047 . + . ID=gene1939;Name=TREPR_2129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2129 CP001843.1 Genbank CDS 2091193 2092047 . + 0 ID=cds1841;Parent=gene1939;Dbxref=NCBI_GP:AEF84652.1;Name=AEF84652.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein AppC;protein_id=AEF84652.1;transl_table=11 CP001843.1 Genbank gene 2092044 2093024 . + . ID=gene1940;Name=TREPR_2128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2128 CP001843.1 Genbank CDS 2092044 2093024 . + 0 ID=cds1842;Parent=gene1940;Dbxref=NCBI_GP:AEF85379.1;Name=AEF85379.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=dipeptide transport ATP-binding protein DppD;protein_id=AEF85379.1;transl_table=11 CP001843.1 Genbank gene 2093021 2093992 . + . ID=gene1941;Name=TREPR_2127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2127 CP001843.1 Genbank CDS 2093021 2093992 . + 0 ID=cds1843;Parent=gene1941;Dbxref=NCBI_GP:AEF86332.1;Name=AEF86332.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF86332.1;transl_table=11 CP001843.1 Genbank gene 2094088 2095389 . + . ID=gene1942;Name=TREPR_2126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2126 CP001843.1 Genbank CDS 2094088 2095389 . + 0 ID=cds1844;Parent=gene1942;Dbxref=NCBI_GP:AEF84249.1;Name=AEF84249.1;gbkey=CDS;product=phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase);protein_id=AEF84249.1;transl_table=11 CP001843.1 Genbank gene 2095399 2095815 . + . ID=gene1943;Name=TREPR_2125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2125 CP001843.1 Genbank CDS 2095399 2095815 . + 0 ID=cds1845;Parent=gene1943;Dbxref=NCBI_GP:AEF85221.1;Name=AEF85221.1;Note=identified by match to protein family HMM PF01842;gbkey=CDS;product=amino acid-binding ACT domain protein;protein_id=AEF85221.1;transl_table=11 CP001843.1 Genbank gene 2095892 2097373 . + . ID=gene1944;Name=TREPR_2124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2124 CP001843.1 Genbank CDS 2095892 2097373 . + 0 ID=cds1846;Parent=gene1944;Dbxref=NCBI_GP:AEF85884.1;Name=AEF85884.1;Note=identified by match to protein family HMM PF00534%3B match to protein family HMM PF08323%3B match to protein family HMM TIGR02095;gbkey=CDS;product=glycogen synthase (Starch [bacterial glycogen]synthase);protein_id=AEF85884.1;transl_table=11 CP001843.1 Genbank gene 2097429 2097848 . + . ID=gene1945;Name=TREPR_2123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2123 CP001843.1 Genbank CDS 2097429 2097848 . + 0 ID=cds1847;Parent=gene1945;Dbxref=NCBI_GP:AEF84992.1;Name=AEF84992.1;Note=identified by match to protein family HMM PF08780;gbkey=CDS;product=nucleotidyltransferase substrate binding-like protein;protein_id=AEF84992.1;transl_table=11 CP001843.1 Genbank gene 2097839 2098141 . + . ID=gene1946;Name=TREPR_2122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2122 CP001843.1 Genbank CDS 2097839 2098141 . + 0 ID=cds1848;Parent=gene1946;Dbxref=NCBI_GP:AEF84751.1;Name=AEF84751.1;Note=identified by match to protein family HMM PF01909;gbkey=CDS;product=DNA polymerase beta domain protein region;protein_id=AEF84751.1;transl_table=11 CP001843.1 Genbank gene 2098163 2099140 . - . ID=gene1947;Name=TREPR_2121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2121 CP001843.1 Genbank CDS 2098163 2099140 . - 0 ID=cds1849;Parent=gene1947;Dbxref=NCBI_GP:AEF83952.1;Name=AEF83952.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83952.1;transl_table=11 CP001843.1 Genbank gene 2099451 2099777 . - . ID=gene1948;Name=TREPR_2120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2120 CP001843.1 Genbank CDS 2099451 2099777 . - 0 ID=cds1850;Parent=gene1948;Dbxref=NCBI_GP:AEF86915.1;Name=AEF86915.1;gbkey=CDS;product=transcriptional regulator%2C sarp family;protein_id=AEF86915.1;transl_table=11 CP001843.1 Genbank gene 2099859 2100074 . - . ID=gene1949;Name=TREPR_2119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2119 CP001843.1 Genbank CDS 2099859 2100074 . - 0 ID=cds1851;Parent=gene1949;Dbxref=NCBI_GP:AEF85992.1;Name=AEF85992.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85992.1;transl_table=11 CP001843.1 Genbank gene 2100543 2100677 . - . ID=gene1950;Name=TREPR_2118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2118 CP001843.1 Genbank CDS 2100543 2100677 . - 0 ID=cds1852;Parent=gene1950;Dbxref=NCBI_GP:AEF83658.1;Name=AEF83658.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83658.1;transl_table=11 CP001843.1 Genbank gene 2100720 2100836 . - . ID=gene1951;Name=TREPR_2117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2117 CP001843.1 Genbank CDS 2100720 2100836 . - 0 ID=cds1853;Parent=gene1951;Dbxref=NCBI_GP:AEF86265.1;Name=AEF86265.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86265.1;transl_table=11 CP001843.1 Genbank gene 2101846 2102700 . - . ID=gene1952;Name=TREPR_2115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2115 CP001843.1 Genbank CDS 2101846 2102700 . - 0 ID=cds1854;Parent=gene1952;Dbxref=NCBI_GP:AEF84694.1;Name=AEF84694.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84694.1;transl_table=11 CP001843.1 Genbank gene 2102793 2105747 . - . ID=gene1953;Name=TREPR_2114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2114 CP001843.1 Genbank CDS 2102793 2105747 . - 0 ID=cds1855;Parent=gene1953;Dbxref=NCBI_GP:AEF83957.1;Name=AEF83957.1;Note=identified by match to protein family HMM PF07581;gbkey=CDS;product=GLUG domain protein;protein_id=AEF83957.1;transl_table=11 CP001843.1 Genbank gene 2105926 2108499 . - . ID=gene1954;Name=TREPR_2113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2113 CP001843.1 Genbank CDS 2105926 2108499 . - 0 ID=cds1856;Parent=gene1954;Dbxref=NCBI_GP:AEF84298.1;Name=AEF84298.1;Note=identified by match to protein family HMM PF07581;gbkey=CDS;product=GLUG domain protein;protein_id=AEF84298.1;transl_table=11 CP001843.1 Genbank pseudogene 2108509 2110230 . - . ID=gene1955;Name=TREPR_2112;Note=cadherin domain/calx-beta domain protein%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2112;pseudo=true CP001843.1 Genbank gene 2110234 2111649 . - . ID=gene1956;Name=TREPR_2111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2111 CP001843.1 Genbank CDS 2110234 2111649 . - 0 ID=cds1857;Parent=gene1956;Dbxref=NCBI_GP:AEF84674.1;Name=AEF84674.1;Note=identified by match to protein family HMM PF00691;gbkey=CDS;product=OmpA;protein_id=AEF84674.1;transl_table=11 CP001843.1 Genbank gene 2112106 2112621 . + . ID=gene1957;Name=TREPR_2108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2108 CP001843.1 Genbank CDS 2112106 2112621 . + 0 ID=cds1858;Parent=gene1957;Dbxref=NCBI_GP:AEF85258.1;Name=AEF85258.1;Note=identified by match to protein family HMM PF07605;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85258.1;transl_table=11 CP001843.1 Genbank gene 2112721 2113329 . + . ID=gene1958;Name=TREPR_2107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2107 CP001843.1 Genbank CDS 2112721 2113329 . + 0 ID=cds1859;Parent=gene1958;Dbxref=NCBI_GP:AEF85433.1;Name=AEF85433.1;Note=identified by match to protein family HMM TIGR02215;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85433.1;transl_table=11 CP001843.1 Genbank gene 2113361 2113807 . + . ID=gene1959;Name=TREPR_2106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2106 CP001843.1 Genbank CDS 2113361 2113807 . + 0 ID=cds1860;Parent=gene1959;Dbxref=NCBI_GP:AEF86794.1;Name=AEF86794.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86794.1;transl_table=11 CP001843.1 Genbank gene 2113814 2114665 . + . ID=gene1960;Name=TREPR_2105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2105 CP001843.1 Genbank CDS 2113814 2114665 . + 0 ID=cds1861;Parent=gene1960;Dbxref=NCBI_GP:AEF84056.1;Name=AEF84056.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84056.1;transl_table=11 CP001843.1 Genbank gene 2114669 2116156 . + . ID=gene1961;Name=TREPR_2104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2104 CP001843.1 Genbank CDS 2114669 2116156 . + 0 ID=cds1862;Parent=gene1961;Dbxref=NCBI_GP:AEF86399.1;Name=AEF86399.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86399.1;transl_table=11 CP001843.1 Genbank gene 2116166 2116393 . + . ID=gene1962;Name=TREPR_2103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2103 CP001843.1 Genbank CDS 2116166 2116393 . + 0 ID=cds1863;Parent=gene1962;Dbxref=NCBI_GP:AEF86695.1;Name=AEF86695.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86695.1;transl_table=11 CP001843.1 Genbank gene 2116393 2116914 . + . ID=gene1963;Name=TREPR_2102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2102 CP001843.1 Genbank CDS 2116393 2116914 . + 0 ID=cds1864;Parent=gene1963;Dbxref=NCBI_GP:AEF85840.1;Name=AEF85840.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85840.1;transl_table=11 CP001843.1 Genbank gene 2117188 2117475 . + . ID=gene1964;Name=TREPR_2101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2101 CP001843.1 Genbank CDS 2117188 2117475 . + 0 ID=cds1865;Parent=gene1964;Dbxref=NCBI_GP:AEF85084.1;Name=AEF85084.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85084.1;transl_table=11 CP001843.1 Genbank gene 2117432 2117737 . + . ID=gene1965;Name=TREPR_2100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2100 CP001843.1 Genbank CDS 2117432 2117737 . + 0 ID=cds1866;Parent=gene1965;Dbxref=NCBI_GP:AEF83553.1;Name=AEF83553.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83553.1;transl_table=11 CP001843.1 Genbank gene 2117761 2118285 . + . ID=gene1966;Name=TREPR_2099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2099 CP001843.1 Genbank CDS 2117761 2118285 . + 0 ID=cds1867;Parent=gene1966;Dbxref=NCBI_GP:AEF86271.1;Name=AEF86271.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86271.1;transl_table=11 CP001843.1 Genbank gene 2118393 2120354 . + . ID=gene1967;Name=TREPR_2097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2097 CP001843.1 Genbank CDS 2118393 2120354 . + 0 ID=cds1868;Parent=gene1967;Dbxref=NCBI_GP:AEF84732.1;Name=AEF84732.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84732.1;transl_table=11 CP001843.1 Genbank gene 2120365 2120655 . + . ID=gene1968;Name=TREPR_2096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2096 CP001843.1 Genbank CDS 2120365 2120655 . + 0 ID=cds1869;Parent=gene1968;Dbxref=NCBI_GP:AEF84837.1;Name=AEF84837.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84837.1;transl_table=11 CP001843.1 Genbank gene 2120658 2121011 . + . ID=gene1969;Name=TREPR_2095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2095 CP001843.1 Genbank CDS 2120658 2121011 . + 0 ID=cds1870;Parent=gene1969;Dbxref=NCBI_GP:AEF86559.1;Name=AEF86559.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86559.1;transl_table=11 CP001843.1 Genbank gene 2120996 2122384 . + . ID=gene1970;Name=TREPR_2094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2094 CP001843.1 Genbank CDS 2120996 2122384 . + 0 ID=cds1871;Parent=gene1970;Dbxref=NCBI_GP:AEF85405.1;Name=AEF85405.1;Note=identified by match to protein family HMM PF08706%3B match to protein family HMM TIGR01613;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85405.1;transl_table=11 CP001843.1 Genbank gene 2122946 2123059 . + . ID=gene1971;Name=TREPR_2093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2093 CP001843.1 Genbank CDS 2122946 2123059 . + 0 ID=cds1872;Parent=gene1971;Dbxref=NCBI_GP:AEF85988.1;Name=AEF85988.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85988.1;transl_table=11 CP001843.1 Genbank gene 2123776 2123919 . + . ID=gene1972;Name=TREPR_2091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2091 CP001843.1 Genbank CDS 2123776 2123919 . + 0 ID=cds1873;Parent=gene1972;Dbxref=NCBI_GP:AEF84059.1;Name=AEF84059.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84059.1;transl_table=11 CP001843.1 Genbank gene 2123916 2124044 . + . ID=gene1973;Name=TREPR_2090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2090 CP001843.1 Genbank CDS 2123916 2124044 . + 0 ID=cds1874;Parent=gene1973;Dbxref=NCBI_GP:AEF85026.1;Name=AEF85026.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85026.1;transl_table=11 CP001843.1 Genbank pseudogene 2124115 2124366 . + . ID=gene1974;Name=TREPR_2089;Note=fibroin 2%3B this region contains one or more premature stops and/or frameshifts;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_2089;pseudo=true CP001843.1 Genbank gene 2124457 2124657 . + . ID=gene1975;Name=TREPR_2088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2088 CP001843.1 Genbank CDS 2124457 2124657 . + 0 ID=cds1875;Parent=gene1975;Dbxref=NCBI_GP:AEF85316.1;Name=AEF85316.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85316.1;transl_table=11 CP001843.1 Genbank gene 2124746 2125018 . + . ID=gene1976;Name=TREPR_2087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2087 CP001843.1 Genbank CDS 2124746 2125018 . + 0 ID=cds1876;Parent=gene1976;Dbxref=NCBI_GP:AEF86537.1;Name=AEF86537.1;Note=identified by match to protein family HMM PF05930;gbkey=CDS;product=transcriptional regulator%2C AlpA family;protein_id=AEF86537.1;transl_table=11 CP001843.1 Genbank gene 2125018 2125560 . + . ID=gene1977;Name=TREPR_2086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2086 CP001843.1 Genbank CDS 2125018 2125560 . + 0 ID=cds1877;Parent=gene1977;Dbxref=NCBI_GP:AEF84126.1;Name=AEF84126.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84126.1;transl_table=11 CP001843.1 Genbank gene 2125575 2126795 . + . ID=gene1978;Name=TREPR_2085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2085 CP001843.1 Genbank CDS 2125575 2126795 . + 0 ID=cds1878;Parent=gene1978;Dbxref=NCBI_GP:AEF84917.1;Name=AEF84917.1;Note=identified by match to protein family HMM PF03237%3B match to protein family HMM TIGR01547;gbkey=CDS;product=phage terminase%2C large subunit%2C PBSX family;protein_id=AEF84917.1;transl_table=11 CP001843.1 Genbank gene 2126792 2128021 . + . ID=gene1979;Name=TREPR_2084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2084 CP001843.1 Genbank CDS 2126792 2128021 . + 0 ID=cds1879;Parent=gene1979;Dbxref=NCBI_GP:AEF85404.1;Name=AEF85404.1;Note=identified by match to protein family HMM PF04860;gbkey=CDS;product=phage portal protein;protein_id=AEF85404.1;transl_table=11 CP001843.1 Genbank gene 2128025 2128726 . + . ID=gene1980;Name=TREPR_2083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2083 CP001843.1 Genbank CDS 2128025 2128726 . + 0 ID=cds1880;Parent=gene1980;Dbxref=NCBI_GP:AEF84399.1;Name=AEF84399.1;Note=identified by match to protein family HMM PF00196%3B match to protein family HMM PF08281;gbkey=CDS;product=two component transcriptional regulator%2C LuxR family;protein_id=AEF84399.1;transl_table=11 CP001843.1 Genbank gene 2128720 2129388 . + . ID=gene1981;Name=TREPR_2082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2082 CP001843.1 Genbank CDS 2128720 2129388 . + 0 ID=cds1881;Parent=gene1981;Dbxref=NCBI_GP:AEF83892.1;Name=AEF83892.1;Note=identified by match to protein family HMM PF04586;gbkey=CDS;product=caudovirus prohead protease;protein_id=AEF83892.1;transl_table=11 CP001843.1 Genbank gene 2129457 2130758 . + . ID=gene1982;Name=TREPR_2081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2081 CP001843.1 Genbank CDS 2129457 2130758 . + 0 ID=cds1882;Parent=gene1982;Dbxref=NCBI_GP:AEF86364.1;Name=AEF86364.1;Note=identified by match to protein family HMM PF05065;gbkey=CDS;product=putative phage capsid family;protein_id=AEF86364.1;transl_table=11 CP001843.1 Genbank gene 2130883 2132121 . - . ID=gene1983;Name=TREPR_2080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2080 CP001843.1 Genbank CDS 2130883 2132121 . - 0 ID=cds1883;Parent=gene1983;Dbxref=NCBI_GP:AEF85874.1;Name=AEF85874.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;product=site-specific recombinase%2C phage integrase family;protein_id=AEF85874.1;transl_table=11 CP001843.1 Genbank gene 2132376 2150243 . - . ID=gene1984;Name=TREPR_2079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2079 CP001843.1 Genbank CDS 2132376 2150243 . - 0 ID=cds1884;Parent=gene1984;Dbxref=NCBI_GP:AEF84647.1;Name=AEF84647.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84647.1;transl_table=11 CP001843.1 Genbank gene 2150352 2152667 . - . ID=gene1985;Name=TREPR_2078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2078 CP001843.1 Genbank CDS 2150352 2152667 . - 0 ID=cds1885;Parent=gene1985;Dbxref=NCBI_GP:AEF84313.1;Name=AEF84313.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84313.1;transl_table=11 CP001843.1 Genbank gene 2152649 2152849 . + . ID=gene1986;Name=TREPR_2076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2076 CP001843.1 Genbank CDS 2152649 2152849 . + 0 ID=cds1886;Parent=gene1986;Dbxref=NCBI_GP:AEF86301.1;Name=AEF86301.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86301.1;transl_table=11 CP001843.1 Genbank gene 2152839 2153969 . - . ID=gene1987;Name=TREPR_2077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2077 CP001843.1 Genbank CDS 2152839 2153969 . - 0 ID=cds1887;Parent=gene1987;Dbxref=NCBI_GP:AEF86910.1;Name=AEF86910.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86910.1;transl_table=11 CP001843.1 Genbank gene 2154054 2169251 . - . ID=gene1988;Name=TREPR_2075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2075 CP001843.1 Genbank CDS 2154054 2169251 . - 0 ID=cds1888;Parent=gene1988;Dbxref=NCBI_GP:AEF85382.1;Name=AEF85382.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85382.1;transl_table=11 CP001843.1 Genbank gene 2169492 2170757 . + . ID=gene1989;Name=TREPR_2073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2073 CP001843.1 Genbank CDS 2169492 2170757 . + 0 ID=cds1889;Parent=gene1989;Dbxref=NCBI_GP:AEF85272.1;Name=AEF85272.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;product=aminotransferase class-III;protein_id=AEF85272.1;transl_table=11 CP001843.1 Genbank gene 2170754 2171158 . + . ID=gene1990;Name=mutT_2;gbkey=Gene;gene=mutT_2;gene_biotype=protein_coding;locus_tag=TREPR_2072 CP001843.1 Genbank CDS 2170754 2171158 . + 0 ID=cds1890;Parent=gene1990;Dbxref=NCBI_GP:AEF83739.1;Name=AEF83739.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;gene=mutT_2;product=MutT/NUDIX family protein;protein_id=AEF83739.1;transl_table=11 CP001843.1 Genbank gene 2171348 2171605 . + . ID=gene1991;Name=TREPR_2071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2071 CP001843.1 Genbank CDS 2171348 2171605 . + 0 ID=cds1891;Parent=gene1991;Dbxref=NCBI_GP:AEF84209.1;Name=AEF84209.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84209.1;transl_table=11 CP001843.1 Genbank gene 2171613 2171888 . + . ID=gene1992;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=TREPR_2070 CP001843.1 Genbank CDS 2171613 2171888 . + 0 ID=cds1892;Parent=gene1992;Dbxref=NCBI_GP:AEF87034.1;Name=AEF87034.1;gbkey=CDS;gene=dinB;product=DNA polymerase IV;protein_id=AEF87034.1;transl_table=11 CP001843.1 Genbank gene 2171966 2176516 . + . ID=gene1993;Name=TREPR_2069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2069 CP001843.1 Genbank CDS 2171966 2176516 . + 0 ID=cds1893;Parent=gene1993;Dbxref=NCBI_GP:AEF86017.1;Name=AEF86017.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF07494;gbkey=CDS;product=putative multi-sensor hybrid histidine kinase;protein_id=AEF86017.1;transl_table=11 CP001843.1 Genbank gene 2176506 2179028 . + . ID=gene1994;Name=TREPR_2068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2068 CP001843.1 Genbank CDS 2176506 2179028 . + 0 ID=cds1894;Parent=gene1994;Dbxref=NCBI_GP:AEF85024.1;Name=AEF85024.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=multi-sensor Hybrid Histidine Kinase;protein_id=AEF85024.1;transl_table=11 CP001843.1 Genbank gene 2179032 2180321 . + . ID=gene1995;Name=TREPR_2067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2067 CP001843.1 Genbank CDS 2179032 2180321 . + 0 ID=cds1895;Parent=gene1995;Dbxref=NCBI_GP:AEF84072.1;Name=AEF84072.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00211;gbkey=CDS;product=adenylyl cyclase class-3/4/guanylyl cyclase;protein_id=AEF84072.1;transl_table=11 CP001843.1 Genbank gene 2181067 2181528 . + . ID=gene1996;Name=TREPR_2065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2065 CP001843.1 Genbank CDS 2181067 2181528 . + 0 ID=cds1896;Parent=gene1996;Dbxref=NCBI_GP:AEF85612.1;Name=AEF85612.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=MutT/NUDIX family protein;protein_id=AEF85612.1;transl_table=11 CP001843.1 Genbank gene 2181654 2182868 . - . ID=gene1997;Name=TREPR_2064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2064 CP001843.1 Genbank CDS 2181654 2182868 . - 0 ID=cds1897;Parent=gene1997;Dbxref=NCBI_GP:AEF86731.1;Name=AEF86731.1;Note=identified by match to protein family HMM PF00872;gbkey=CDS;product=transposase%2C Mutator family;protein_id=AEF86731.1;transl_table=11 CP001843.1 Genbank gene 2182963 2183175 . - . ID=gene1998;Name=TREPR_2063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2063 CP001843.1 Genbank CDS 2182963 2183175 . - 0 ID=cds1898;Parent=gene1998;Dbxref=NCBI_GP:AEF84352.1;Name=AEF84352.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84352.1;transl_table=11 CP001843.1 Genbank gene 2183168 2183509 . - . ID=gene1999;Name=TREPR_2062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2062 CP001843.1 Genbank CDS 2183168 2183509 . - 0 ID=cds1899;Parent=gene1999;Dbxref=NCBI_GP:AEF84465.1;Name=AEF84465.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84465.1;transl_table=11 CP001843.1 Genbank gene 2183502 2184095 . - . ID=gene2000;Name=TREPR_2061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2061 CP001843.1 Genbank CDS 2183502 2184095 . - 0 ID=cds1900;Parent=gene2000;Dbxref=NCBI_GP:AEF85502.1;Name=AEF85502.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85502.1;transl_table=11 CP001843.1 Genbank gene 2184428 2184646 . - . ID=gene2001;Name=TREPR_2060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2060 CP001843.1 Genbank CDS 2184428 2184646 . - 0 ID=cds1901;Parent=gene2001;Dbxref=NCBI_GP:AEF85413.1;Name=AEF85413.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85413.1;transl_table=11 CP001843.1 Genbank gene 2184732 2184926 . - . ID=gene2002;Name=TREPR_2059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2059 CP001843.1 Genbank CDS 2184732 2184926 . - 0 ID=cds1902;Parent=gene2002;Dbxref=NCBI_GP:AEF86274.1;Name=AEF86274.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86274.1;transl_table=11 CP001843.1 Genbank gene 2184901 2185020 . - . ID=gene2003;Name=TREPR_2058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2058 CP001843.1 Genbank CDS 2184901 2185020 . - 0 ID=cds1903;Parent=gene2003;Dbxref=NCBI_GP:AEF84838.1;Name=AEF84838.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84838.1;transl_table=11 CP001843.1 Genbank gene 2185042 2185191 . - . ID=gene2004;Name=TREPR_2057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2057 CP001843.1 Genbank CDS 2185042 2185191 . - 0 ID=cds1904;Parent=gene2004;Dbxref=NCBI_GP:AEF84705.1;Name=AEF84705.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84705.1;transl_table=11 CP001843.1 Genbank gene 2185960 2186085 . - . ID=gene2005;Name=TREPR_2055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2055 CP001843.1 Genbank CDS 2185960 2186085 . - 0 ID=cds1905;Parent=gene2005;Dbxref=NCBI_GP:AEF86619.1;Name=AEF86619.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86619.1;transl_table=11 CP001843.1 Genbank gene 2186366 2186509 . - . ID=gene2006;Name=TREPR_2053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2053 CP001843.1 Genbank CDS 2186366 2186509 . - 0 ID=cds1906;Parent=gene2006;Dbxref=NCBI_GP:AEF83963.1;Name=AEF83963.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83963.1;transl_table=11 CP001843.1 Genbank gene 2186638 2188032 . - . ID=gene2007;Name=TREPR_2052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2052 CP001843.1 Genbank CDS 2186638 2188032 . - 0 ID=cds1907;Parent=gene2007;Dbxref=NCBI_GP:AEF86065.1;Name=AEF86065.1;Note=identified by match to protein family HMM PF08706%3B match to protein family HMM TIGR01613;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86065.1;transl_table=11 CP001843.1 Genbank gene 2188032 2188367 . - . ID=gene2008;Name=TREPR_2051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2051 CP001843.1 Genbank CDS 2188032 2188367 . - 0 ID=cds1908;Parent=gene2008;Dbxref=NCBI_GP:AEF85273.1;Name=AEF85273.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85273.1;transl_table=11 CP001843.1 Genbank gene 2188649 2188939 . - . ID=gene2009;Name=TREPR_2050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2050 CP001843.1 Genbank CDS 2188649 2188939 . - 0 ID=cds1909;Parent=gene2009;Dbxref=NCBI_GP:AEF84090.1;Name=AEF84090.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84090.1;transl_table=11 CP001843.1 Genbank gene 2188948 2190990 . - . ID=gene2010;Name=TREPR_2049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2049 CP001843.1 Genbank CDS 2188948 2190990 . - 0 ID=cds1910;Parent=gene2010;Dbxref=NCBI_GP:AEF86409.1;Name=AEF86409.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86409.1;transl_table=11 CP001843.1 Genbank gene 2191033 2191557 . - . ID=gene2011;Name=TREPR_2048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2048 CP001843.1 Genbank CDS 2191033 2191557 . - 0 ID=cds1911;Parent=gene2011;Dbxref=NCBI_GP:AEF84605.1;Name=AEF84605.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84605.1;transl_table=11 CP001843.1 Genbank gene 2191584 2191967 . - . ID=gene2012;Name=TREPR_2047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2047 CP001843.1 Genbank CDS 2191584 2191967 . - 0 ID=cds1912;Parent=gene2012;Dbxref=NCBI_GP:AEF83589.1;Name=AEF83589.1;gbkey=CDS;product=putative binding-protein-dependent transport systems inner membrane component;protein_id=AEF83589.1;transl_table=11 CP001843.1 Genbank gene 2192006 2192386 . - . ID=gene2013;Name=TREPR_2046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2046 CP001843.1 Genbank CDS 2192006 2192386 . - 0 ID=cds1913;Parent=gene2013;Dbxref=NCBI_GP:AEF86573.1;Name=AEF86573.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86573.1;transl_table=11 CP001843.1 Genbank gene 2192383 2192904 . - . ID=gene2014;Name=TREPR_2045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2045 CP001843.1 Genbank CDS 2192383 2192904 . - 0 ID=cds1914;Parent=gene2014;Dbxref=NCBI_GP:AEF85564.1;Name=AEF85564.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85564.1;transl_table=11 CP001843.1 Genbank gene 2192904 2193131 . - . ID=gene2015;Name=TREPR_2044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2044 CP001843.1 Genbank CDS 2192904 2193131 . - 0 ID=cds1915;Parent=gene2015;Dbxref=NCBI_GP:AEF85017.1;Name=AEF85017.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85017.1;transl_table=11 CP001843.1 Genbank gene 2193151 2194662 . - . ID=gene2016;Name=TREPR_2043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2043 CP001843.1 Genbank CDS 2193151 2194662 . - 0 ID=cds1916;Parent=gene2016;Dbxref=NCBI_GP:AEF83978.1;Name=AEF83978.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83978.1;transl_table=11 CP001843.1 Genbank gene 2194659 2195537 . - . ID=gene2017;Name=TREPR_2042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2042 CP001843.1 Genbank CDS 2194659 2195537 . - 0 ID=cds1917;Parent=gene2017;Dbxref=NCBI_GP:AEF86983.1;Name=AEF86983.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86983.1;transl_table=11 CP001843.1 Genbank gene 2195534 2195968 . - . ID=gene2018;Name=TREPR_2041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2041 CP001843.1 Genbank CDS 2195534 2195968 . - 0 ID=cds1918;Parent=gene2018;Dbxref=NCBI_GP:AEF85368.1;Name=AEF85368.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85368.1;transl_table=11 CP001843.1 Genbank gene 2195992 2196588 . - . ID=gene2019;Name=TREPR_2040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2040 CP001843.1 Genbank CDS 2195992 2196588 . - 0 ID=cds1919;Parent=gene2019;Dbxref=NCBI_GP:AEF83848.1;Name=AEF83848.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83848.1;transl_table=11 CP001843.1 Genbank gene 2197009 2197848 . + . ID=gene2020;Name=TREPR_2038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2038 CP001843.1 Genbank CDS 2197009 2197848 . + 0 ID=cds1920;Parent=gene2020;Dbxref=NCBI_GP:AEF84849.1;Name=AEF84849.1;gbkey=CDS;product=putative UvrD/REP helicase;protein_id=AEF84849.1;transl_table=11 CP001843.1 Genbank gene 2197910 2198575 . + . ID=gene2021;Name=TREPR_2037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2037 CP001843.1 Genbank CDS 2197910 2198575 . + 0 ID=cds1921;Parent=gene2021;Dbxref=NCBI_GP:AEF84087.1;Name=AEF84087.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84087.1;transl_table=11 CP001843.1 Genbank gene 2198728 2199282 . + . ID=gene2022;Name=TREPR_2036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2036 CP001843.1 Genbank CDS 2198728 2199282 . + 0 ID=cds1922;Parent=gene2022;Dbxref=NCBI_GP:AEF84092.1;Name=AEF84092.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84092.1;transl_table=11 CP001843.1 Genbank gene 2199304 2199582 . + . ID=gene2023;Name=TREPR_2035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2035 CP001843.1 Genbank CDS 2199304 2199582 . + 0 ID=cds1923;Parent=gene2023;Dbxref=NCBI_GP:AEF86843.1;Name=AEF86843.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86843.1;transl_table=11 CP001843.1 Genbank gene 2199809 2200576 . + . ID=gene2024;Name=TREPR_2034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2034 CP001843.1 Genbank CDS 2199809 2200576 . + 0 ID=cds1924;Parent=gene2024;Dbxref=NCBI_GP:AEF86587.1;Name=AEF86587.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86587.1;transl_table=11 CP001843.1 Genbank gene 2201133 2201549 . - . ID=gene2025;Name=TREPR_2032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2032 CP001843.1 Genbank CDS 2201133 2201549 . - 0 ID=cds1925;Parent=gene2025;Dbxref=NCBI_GP:AEF86110.1;Name=AEF86110.1;gbkey=CDS;product=putative weak: protein;protein_id=AEF86110.1;transl_table=11 CP001843.1 Genbank gene 2202498 2205446 . - . ID=gene2026;Name=TREPR_2029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2029 CP001843.1 Genbank CDS 2202498 2205446 . - 0 ID=cds1926;Parent=gene2026;Dbxref=NCBI_GP:AEF85201.1;Name=AEF85201.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594;gbkey=CDS;product=error-prone DNA polymerase;protein_id=AEF85201.1;transl_table=11 CP001843.1 Genbank gene 2205439 2206656 . - . ID=gene2027;Name=TREPR_2028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2028 CP001843.1 Genbank CDS 2205439 2206656 . - 0 ID=cds1927;Parent=gene2027;Dbxref=NCBI_GP:AEF85627.1;Name=AEF85627.1;Note=identified by match to protein family HMM PF00817;gbkey=CDS;product=DNA-directed DNA polymerase;protein_id=AEF85627.1;transl_table=11 CP001843.1 Genbank gene 2206659 2207462 . - . ID=gene2028;Name=TREPR_2027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2027 CP001843.1 Genbank CDS 2206659 2207462 . - 0 ID=cds1928;Parent=gene2028;Dbxref=NCBI_GP:AEF86408.1;Name=AEF86408.1;Note=identified by match to protein family HMM PF01904;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86408.1;transl_table=11 CP001843.1 Genbank gene 2207575 2208198 . + . ID=gene2029;Name=TREPR_2026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2026 CP001843.1 Genbank CDS 2207575 2208198 . + 0 ID=cds1929;Parent=gene2029;Dbxref=NCBI_GP:AEF83595.1;Name=AEF83595.1;Note=identified by match to protein family HMM PF00717;gbkey=CDS;product=peptidase%2C S24;protein_id=AEF83595.1;transl_table=11 CP001843.1 Genbank gene 2208226 2208588 . + . ID=gene2030;Name=TREPR_2025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2025 CP001843.1 Genbank CDS 2208226 2208588 . + 0 ID=cds1930;Parent=gene2030;Dbxref=NCBI_GP:AEF84749.1;Name=AEF84749.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84749.1;transl_table=11 CP001843.1 Genbank gene 2208590 2213590 . + . ID=gene2031;Name=TREPR_2024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2024 CP001843.1 Genbank CDS 2208590 2213590 . + 0 ID=cds1931;Parent=gene2031;Dbxref=NCBI_GP:AEF85129.1;Name=AEF85129.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM PF04851;gbkey=CDS;product=endonuclease and methylase LlaGI;protein_id=AEF85129.1;transl_table=11 CP001843.1 Genbank gene 2213635 2214786 . + . ID=gene2032;Name=TREPR_2023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2023 CP001843.1 Genbank CDS 2213635 2214786 . + 0 ID=cds1932;Parent=gene2032;Dbxref=NCBI_GP:AEF86340.1;Name=AEF86340.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86340.1;transl_table=11 CP001843.1 Genbank gene 2215253 2215789 . - . ID=gene2033;Name=TREPR_2022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2022 CP001843.1 Genbank CDS 2215253 2215789 . - 0 ID=cds1933;Parent=gene2033;Dbxref=NCBI_GP:AEF86795.1;Name=AEF86795.1;gbkey=CDS;product=thyroid hormone receptor interactor 4;protein_id=AEF86795.1;transl_table=11 CP001843.1 Genbank gene 2215828 2215953 . - . ID=gene2034;Name=TREPR_2021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2021 CP001843.1 Genbank CDS 2215828 2215953 . - 0 ID=cds1934;Parent=gene2034;Dbxref=NCBI_GP:AEF85788.1;Name=AEF85788.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85788.1;transl_table=11 CP001843.1 Genbank gene 2216641 2216970 . + . ID=gene2035;Name=TREPR_2019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2019 CP001843.1 Genbank CDS 2216641 2216970 . + 0 ID=cds1935;Parent=gene2035;Dbxref=NCBI_GP:AEF85777.1;Name=AEF85777.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85777.1;transl_table=11 CP001843.1 Genbank gene 2217029 2217448 . + . ID=gene2036;Name=TREPR_2018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2018 CP001843.1 Genbank CDS 2217029 2217448 . + 0 ID=cds1936;Parent=gene2036;Dbxref=NCBI_GP:AEF84806.1;Name=AEF84806.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84806.1;transl_table=11 CP001843.1 Genbank gene 2217487 2218791 . - . ID=gene2037;Name=TREPR_2017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2017 CP001843.1 Genbank CDS 2217487 2218791 . - 0 ID=cds1937;Parent=gene2037;Dbxref=NCBI_GP:AEF83766.1;Name=AEF83766.1;Note=identified by match to protein family HMM PF05065;gbkey=CDS;product=putative phage capsid family;protein_id=AEF83766.1;transl_table=11 CP001843.1 Genbank gene 2218860 2219555 . - . ID=gene2038;Name=TREPR_2016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2016 CP001843.1 Genbank CDS 2218860 2219555 . - 0 ID=cds1938;Parent=gene2038;Dbxref=NCBI_GP:AEF86331.1;Name=AEF86331.1;Note=identified by match to protein family HMM PF04586;gbkey=CDS;product=putative caudovirus prohead protease;protein_id=AEF86331.1;transl_table=11 CP001843.1 Genbank gene 2219536 2220258 . - . ID=gene2039;Name=TREPR_2015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2015 CP001843.1 Genbank CDS 2219536 2220258 . - 0 ID=cds1939;Parent=gene2039;Dbxref=NCBI_GP:AEF85439.1;Name=AEF85439.1;Note=identified by match to protein family HMM PF00196;gbkey=CDS;product=transcriptional regulator%2C LuxR family protein;protein_id=AEF85439.1;transl_table=11 CP001843.1 Genbank gene 2220248 2221438 . - . ID=gene2040;Name=TREPR_2014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2014 CP001843.1 Genbank CDS 2220248 2221438 . - 0 ID=cds1940;Parent=gene2040;Dbxref=NCBI_GP:AEF85247.1;Name=AEF85247.1;Note=identified by match to protein family HMM PF04860%3B match to protein family HMM TIGR01537;gbkey=CDS;product=phage portal protein%2C HK97 family;protein_id=AEF85247.1;transl_table=11 CP001843.1 Genbank gene 2221495 2222730 . - . ID=gene2041;Name=TREPR_2013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2013 CP001843.1 Genbank CDS 2221495 2222730 . - 0 ID=cds1941;Parent=gene2041;Dbxref=NCBI_GP:AEF84242.1;Name=AEF84242.1;Note=identified by match to protein family HMM TIGR01547;gbkey=CDS;product=phage terminase%2C large subunit%2C PBSX family;protein_id=AEF84242.1;transl_table=11 CP001843.1 Genbank gene 2222733 2223269 . - . ID=gene2042;Name=TREPR_2012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2012 CP001843.1 Genbank CDS 2222733 2223269 . - 0 ID=cds1942;Parent=gene2042;Dbxref=NCBI_GP:AEF85209.1;Name=AEF85209.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85209.1;transl_table=11 CP001843.1 Genbank gene 2223253 2223579 . - . ID=gene2043;Name=TREPR_2011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2011 CP001843.1 Genbank CDS 2223253 2223579 . - 0 ID=cds1943;Parent=gene2043;Dbxref=NCBI_GP:AEF84270.1;Name=AEF84270.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84270.1;transl_table=11 CP001843.1 Genbank gene 2223709 2225178 . - . ID=gene2044;Name=TREPR_2010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2010 CP001843.1 Genbank CDS 2223709 2225178 . - 0 ID=cds1944;Parent=gene2044;Dbxref=NCBI_GP:AEF86798.1;Name=AEF86798.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;product=site-specific recombinase%2C phage integrase family;protein_id=AEF86798.1;transl_table=11 CP001843.1 Genbank gene 2225325 2225396 . - . ID=gene2045;Name=TREPR_3924;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3924 CP001843.1 Genbank tRNA 2225325 2225396 . - . ID=rna38;Parent=gene2045;gbkey=tRNA;product=tRNA-Cys CP001843.1 Genbank exon 2225325 2225396 . - . ID=id43;Parent=rna38;gbkey=tRNA;product=tRNA-Cys CP001843.1 Genbank gene 2225887 2244411 . + . ID=gene2046;Name=TREPR_2007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2007 CP001843.1 Genbank CDS 2225887 2244411 . + 0 ID=cds1945;Parent=gene2046;Dbxref=NCBI_GP:AEF83767.1;Name=AEF83767.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83767.1;transl_table=11 CP001843.1 Genbank gene 2244493 2245524 . + . ID=gene2047;Name=TREPR_2006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2006 CP001843.1 Genbank CDS 2244493 2245524 . + 0 ID=cds1946;Parent=gene2047;Dbxref=NCBI_GP:AEF86386.1;Name=AEF86386.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86386.1;transl_table=11 CP001843.1 Genbank gene 2245502 2249899 . + . ID=gene2048;Name=TREPR_2005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2005 CP001843.1 Genbank CDS 2245502 2249899 . + 0 ID=cds1947;Parent=gene2048;Dbxref=NCBI_GP:AEF85400.1;Name=AEF85400.1;gbkey=CDS;product=putative BNR domain protein;protein_id=AEF85400.1;transl_table=11 CP001843.1 Genbank gene 2249918 2251879 . + . ID=gene2049;Name=TREPR_2004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2004 CP001843.1 Genbank CDS 2249918 2251879 . + 0 ID=cds1948;Parent=gene2049;Dbxref=NCBI_GP:AEF85249.1;Name=AEF85249.1;gbkey=CDS;product=cytoplasmic filament protein A;protein_id=AEF85249.1;transl_table=11 CP001843.1 Genbank gene 2251876 2253201 . + . ID=gene2050;Name=TREPR_2003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2003 CP001843.1 Genbank CDS 2251876 2253201 . + 0 ID=cds1949;Parent=gene2050;Dbxref=NCBI_GP:AEF85953.1;Name=AEF85953.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative sugar ABC transporter;protein_id=AEF85953.1;transl_table=11 CP001843.1 Genbank gene 2253207 2253875 . - . ID=gene2051;Name=TREPR_2002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2002 CP001843.1 Genbank CDS 2253207 2253875 . - 0 ID=cds1950;Parent=gene2051;Dbxref=NCBI_GP:AEF85501.1;Name=AEF85501.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF85501.1;transl_table=11 CP001843.1 Genbank gene 2253877 2255142 . - . ID=gene2052;Name=TREPR_2001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2001 CP001843.1 Genbank CDS 2253877 2255142 . - 0 ID=cds1951;Parent=gene2052;Dbxref=NCBI_GP:AEF86244.1;Name=AEF86244.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86244.1;transl_table=11 CP001843.1 Genbank gene 2255152 2256057 . - . ID=gene2053;Name=TREPR_2000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_2000 CP001843.1 Genbank CDS 2255152 2256057 . - 0 ID=cds1952;Parent=gene2053;Dbxref=NCBI_GP:AEF83930.1;Name=AEF83930.1;Note=identified by match to protein family HMM PF07859;gbkey=CDS;product=arylacetamide deacetylase (aadac);protein_id=AEF83930.1;transl_table=11 CP001843.1 Genbank gene 2256410 2256886 . - . ID=gene2054;Name=TREPR_1999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1999 CP001843.1 Genbank CDS 2256410 2256886 . - 0 ID=cds1953;Parent=gene2054;Dbxref=NCBI_GP:AEF85716.1;Name=AEF85716.1;Note=identified by match to protein family HMM PF02643;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85716.1;transl_table=11 CP001843.1 Genbank gene 2256888 2257595 . - . ID=gene2055;Name=TREPR_1998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1998 CP001843.1 Genbank CDS 2256888 2257595 . - 0 ID=cds1954;Parent=gene2055;Dbxref=NCBI_GP:AEF86471.1;Name=AEF86471.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86471.1;transl_table=11 CP001843.1 Genbank gene 2257730 2258905 . - . ID=gene2056;Name=TREPR_1997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1997 CP001843.1 Genbank CDS 2257730 2258905 . - 0 ID=cds1955;Parent=gene2056;Dbxref=NCBI_GP:AEF83989.1;Name=AEF83989.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;product=cyclic nucleotide-binding protein;protein_id=AEF83989.1;transl_table=11 CP001843.1 Genbank gene 2259058 2260038 . - . ID=gene2057;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=TREPR_1995 CP001843.1 Genbank CDS 2259058 2260038 . - 0 ID=cds1956;Parent=gene2057;Dbxref=NCBI_GP:AEF85161.1;Name=AEF85161.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179;gbkey=CDS;gene=murB;product=UDP-N-acetylmuramate dehydrogenase;protein_id=AEF85161.1;transl_table=11 CP001843.1 Genbank gene 2260025 2262103 . - . ID=gene2058;Name=TREPR_1994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1994 CP001843.1 Genbank CDS 2260025 2262103 . - 0 ID=cds1957;Parent=gene2058;Dbxref=NCBI_GP:AEF84423.1;Name=AEF84423.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84423.1;transl_table=11 CP001843.1 Genbank gene 2262155 2262367 . + . ID=gene2059;Name=TREPR_1993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1993 CP001843.1 Genbank CDS 2262155 2262367 . + 0 ID=cds1958;Parent=gene2059;Dbxref=NCBI_GP:AEF84515.1;Name=AEF84515.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84515.1;transl_table=11 CP001843.1 Genbank gene 2262385 2262966 . + . ID=gene2060;Name=TREPR_1992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1992 CP001843.1 Genbank CDS 2262385 2262966 . + 0 ID=cds1959;Parent=gene2060;Dbxref=NCBI_GP:AEF84233.1;Name=AEF84233.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84233.1;transl_table=11 CP001843.1 Genbank gene 2263161 2263310 . - . ID=gene2061;Name=TREPR_1991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1991 CP001843.1 Genbank CDS 2263161 2263310 . - 0 ID=cds1960;Parent=gene2061;Dbxref=NCBI_GP:AEF86966.1;Name=AEF86966.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86966.1;transl_table=11 CP001843.1 Genbank gene 2263640 2267203 . + . ID=gene2062;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=TREPR_1990 CP001843.1 Genbank CDS 2263640 2267203 . + 0 ID=cds1961;Parent=gene2062;Dbxref=NCBI_GP:AEF85774.1;Name=AEF85774.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02176;gbkey=CDS;gene=nifJ;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=AEF85774.1;transl_table=11 CP001843.1 Genbank gene 2267515 2269047 . + . ID=gene2063;Name=TREPR_1989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1989 CP001843.1 Genbank CDS 2267515 2269047 . + 0 ID=cds1962;Parent=gene2063;Dbxref=NCBI_GP:AEF85923.1;Name=AEF85923.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85923.1;transl_table=11 CP001843.1 Genbank gene 2269057 2270355 . + . ID=gene2064;Name=TREPR_1988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1988 CP001843.1 Genbank CDS 2269057 2270355 . + 0 ID=cds1963;Parent=gene2064;Dbxref=NCBI_GP:AEF83781.1;Name=AEF83781.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=glycosyltransferase%2C family 1;protein_id=AEF83781.1;transl_table=11 CP001843.1 Genbank gene 2270389 2271033 . + . ID=gene2065;Name=TREPR_1987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1987 CP001843.1 Genbank CDS 2270389 2271033 . + 0 ID=cds1964;Parent=gene2065;Dbxref=NCBI_GP:AEF86518.1;Name=AEF86518.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;product=HAD superfamily hydrolase;protein_id=AEF86518.1;transl_table=11 CP001843.1 Genbank gene 2271058 2273616 . + . ID=gene2066;Name=TREPR_1986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1986 CP001843.1 Genbank CDS 2271058 2273616 . + 0 ID=cds1965;Parent=gene2066;Dbxref=NCBI_GP:AEF85291.1;Name=AEF85291.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor protein GacS;protein_id=AEF85291.1;transl_table=11 CP001843.1 Genbank gene 2273636 2277232 . + . ID=gene2067;Name=TREPR_1985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1985 CP001843.1 Genbank CDS 2273636 2277232 . + 0 ID=cds1966;Parent=gene2067;Dbxref=NCBI_GP:AEF85474.1;Name=AEF85474.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=sensory box sensor histidine kinase/response regulator;protein_id=AEF85474.1;transl_table=11 CP001843.1 Genbank gene 2277254 2277958 . + . ID=gene2068;Name=TREPR_1983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1983 CP001843.1 Genbank CDS 2277254 2277958 . + 0 ID=cds1967;Parent=gene2068;Dbxref=NCBI_GP:AEF85010.1;Name=AEF85010.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;product=putative PHP domain protein;protein_id=AEF85010.1;transl_table=11 CP001843.1 Genbank gene 2278310 2279359 . + . ID=gene2069;Name=TREPR_1982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1982 CP001843.1 Genbank CDS 2278310 2279359 . + 0 ID=cds1968;Parent=gene2069;Dbxref=NCBI_GP:AEF83789.1;Name=AEF83789.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=AEF83789.1;transl_table=11 CP001843.1 Genbank gene 2279453 2281234 . + . ID=gene2070;Name=TREPR_1981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1981 CP001843.1 Genbank CDS 2279453 2281234 . + 0 ID=cds1969;Parent=gene2070;Dbxref=NCBI_GP:AEF86946.1;Name=AEF86946.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter permease protein;protein_id=AEF86946.1;transl_table=11 CP001843.1 Genbank gene 2281227 2282366 . + . ID=gene2071;Name=TREPR_1980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1980 CP001843.1 Genbank CDS 2281227 2282366 . + 0 ID=cds1970;Parent=gene2071;Dbxref=NCBI_GP:AEF85747.1;Name=AEF85747.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402%3B match to protein family HMM TIGR01187;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=AEF85747.1;transl_table=11 CP001843.1 Genbank gene 2282653 2283735 . + . ID=gene2072;Name=TREPR_1979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1979 CP001843.1 Genbank CDS 2282653 2283735 . + 0 ID=cds1971;Parent=gene2072;Dbxref=NCBI_GP:AEF84571.1;Name=AEF84571.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84571.1;transl_table=11 CP001843.1 Genbank gene 2283732 2284499 . + . ID=gene2073;Name=TREPR_1978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1978 CP001843.1 Genbank CDS 2283732 2284499 . + 0 ID=cds1972;Parent=gene2073;Dbxref=NCBI_GP:AEF85135.1;Name=AEF85135.1;Note=identified by match to protein family HMM PF00702;gbkey=CDS;product=hydrolase;protein_id=AEF85135.1;transl_table=11 CP001843.1 Genbank gene 2284492 2285262 . + . ID=gene2074;Name=TREPR_1977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1977 CP001843.1 Genbank CDS 2284492 2285262 . + 0 ID=cds1973;Parent=gene2074;Dbxref=NCBI_GP:AEF86531.1;Name=AEF86531.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549;gbkey=CDS;product=HAD-superfamily hydrolase%2C subfamily IA%2C variant 1;protein_id=AEF86531.1;transl_table=11 CP001843.1 Genbank gene 2285309 2287174 . + . ID=gene2075;Name=TREPR_1976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1976 CP001843.1 Genbank CDS 2285309 2287174 . + 0 ID=cds1974;Parent=gene2075;Dbxref=NCBI_GP:AEF85314.1;Name=AEF85314.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF85314.1;transl_table=11 CP001843.1 Genbank gene 2287239 2288360 . + . ID=gene2076;Name=TREPR_1975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1975 CP001843.1 Genbank CDS 2287239 2288360 . + 0 ID=cds1975;Parent=gene2076;Dbxref=NCBI_GP:AEF84772.1;Name=AEF84772.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402;gbkey=CDS;product=tobe domain family;protein_id=AEF84772.1;transl_table=11 CP001843.1 Genbank gene 2288382 2289578 . + . ID=gene2077;Name=TREPR_1974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1974 CP001843.1 Genbank CDS 2288382 2289578 . + 0 ID=cds1976;Parent=gene2077;Dbxref=NCBI_GP:AEF83603.1;Name=AEF83603.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=conserved hypothetical ABC transporter periplasmic solute-binding protein;protein_id=AEF83603.1;transl_table=11 CP001843.1 Genbank gene 2289688 2290116 . + . ID=gene2078;Name=TREPR_1973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1973 CP001843.1 Genbank CDS 2289688 2290116 . + 0 ID=cds1977;Parent=gene2078;Dbxref=NCBI_GP:AEF86799.1;Name=AEF86799.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86799.1;transl_table=11 CP001843.1 Genbank gene 2290211 2291275 . + . ID=gene2079;Name=TREPR_1972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1972 CP001843.1 Genbank CDS 2290211 2291275 . + 0 ID=cds1978;Parent=gene2079;Dbxref=NCBI_GP:AEF83971.1;Name=AEF83971.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=LacI family transcriptional repressor;protein_id=AEF83971.1;transl_table=11 CP001843.1 Genbank gene 2291259 2292152 . + . ID=gene2080;Name=TREPR_1971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1971 CP001843.1 Genbank CDS 2291259 2292152 . + 0 ID=cds1979;Parent=gene2080;Dbxref=NCBI_GP:AEF85263.1;Name=AEF85263.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=putative ribokinase;protein_id=AEF85263.1;transl_table=11 CP001843.1 Genbank gene 2292180 2292881 . + . ID=gene2081;Name=TREPR_1970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1970 CP001843.1 Genbank CDS 2292180 2292881 . + 0 ID=cds1980;Parent=gene2081;Dbxref=NCBI_GP:AEF85822.1;Name=AEF85822.1;Note=identified by match to protein family HMM PF02308;gbkey=CDS;product=MgtC/SapB transporter;protein_id=AEF85822.1;transl_table=11 CP001843.1 Genbank gene 2292907 2293788 . + . ID=gene2082;Name=TREPR_1969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1969 CP001843.1 Genbank CDS 2292907 2293788 . + 0 ID=cds1981;Parent=gene2082;Dbxref=NCBI_GP:AEF86385.1;Name=AEF86385.1;Note=identified by match to protein family HMM PF03819%3B match to protein family HMM TIGR00444;gbkey=CDS;product=MazG family protein;protein_id=AEF86385.1;transl_table=11 CP001843.1 Genbank gene 2293811 2294785 . - . ID=gene2083;Name=TREPR_1968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1968 CP001843.1 Genbank CDS 2293811 2294785 . - 0 ID=cds1982;Parent=gene2083;Dbxref=NCBI_GP:AEF84287.1;Name=AEF84287.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;product=phosphoglycerate dehydrogenase;protein_id=AEF84287.1;transl_table=11 CP001843.1 Genbank gene 2294801 2295424 . - . ID=gene2084;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=TREPR_1967 CP001843.1 Genbank CDS 2294801 2295424 . - 0 ID=cds1983;Parent=gene2084;Dbxref=NCBI_GP:AEF84791.1;Name=AEF84791.1;Note=identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447;gbkey=CDS;gene=pth;product=aminoacyl-tRNA hydrolase;protein_id=AEF84791.1;transl_table=11 CP001843.1 Genbank gene 2295496 2297352 . + . ID=gene2085;Name=TREPR_1966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1966 CP001843.1 Genbank CDS 2295496 2297352 . + 0 ID=cds1984;Parent=gene2085;Dbxref=NCBI_GP:AEF85385.1;Name=AEF85385.1;Note=identified by match to protein family HMM PF02065;gbkey=CDS;product=alpha galactosidase;protein_id=AEF85385.1;transl_table=11 CP001843.1 Genbank gene 2297353 2299005 . + . ID=gene2086;Name=TREPR_1965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1965 CP001843.1 Genbank CDS 2297353 2299005 . + 0 ID=cds1985;Parent=gene2086;Dbxref=NCBI_GP:AEF84475.1;Name=AEF84475.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF02833%3B match to protein family HMM PF07085;gbkey=CDS;product=manganese-dependent inorganic pyrophosphatase;protein_id=AEF84475.1;transl_table=11 CP001843.1 Genbank gene 2299264 2300076 . + . ID=gene2087;Name=TREPR_1964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1964 CP001843.1 Genbank CDS 2299264 2300076 . + 0 ID=cds1986;Parent=gene2087;Dbxref=NCBI_GP:AEF85703.1;Name=AEF85703.1;Note=identified by match to protein family HMM PF00376;gbkey=CDS;product=transcriptional regulator%2C MerR family;protein_id=AEF85703.1;transl_table=11 CP001843.1 Genbank gene 2300239 2301294 . + . ID=gene2088;Name=TREPR_1963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1963 CP001843.1 Genbank CDS 2300239 2301294 . + 0 ID=cds1987;Parent=gene2088;Dbxref=NCBI_GP:AEF85858.1;Name=AEF85858.1;Note=identified by match to protein family HMM PF00665;gbkey=CDS;product=putative transposase;protein_id=AEF85858.1;transl_table=11 CP001843.1 Genbank gene 2301377 2302345 . + . ID=gene2089;Name=TREPR_1962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1962 CP001843.1 Genbank CDS 2301377 2302345 . + 0 ID=cds1988;Parent=gene2089;Dbxref=NCBI_GP:AEF86670.1;Name=AEF86670.1;gbkey=CDS;product=veratrol:corrinoid protein metyltransferase;protein_id=AEF86670.1;transl_table=11 CP001843.1 Genbank gene 2302410 2303021 . + . ID=gene2090;Name=TREPR_1961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1961 CP001843.1 Genbank CDS 2302410 2303021 . + 0 ID=cds1989;Parent=gene2090;Dbxref=NCBI_GP:AEF84391.1;Name=AEF84391.1;Note=identified by match to protein family HMM PF02492;gbkey=CDS;product=cobalamin synthesis protein/P47K family protein;protein_id=AEF84391.1;transl_table=11 CP001843.1 Genbank gene 2303022 2303438 . + . ID=gene2091;Name=TREPR_1960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1960 CP001843.1 Genbank CDS 2303022 2303438 . + 0 ID=cds1990;Parent=gene2091;Dbxref=NCBI_GP:AEF85293.1;Name=AEF85293.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85293.1;transl_table=11 CP001843.1 Genbank gene 2303531 2304589 . - . ID=gene2092;Name=TREPR_1959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1959 CP001843.1 Genbank CDS 2303531 2304589 . - 0 ID=cds1991;Parent=gene2092;Dbxref=NCBI_GP:AEF86369.1;Name=AEF86369.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF86369.1;transl_table=11 CP001843.1 Genbank gene 2304599 2305600 . - . ID=gene2093;Name=TREPR_1958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1958 CP001843.1 Genbank CDS 2304599 2305600 . - 0 ID=cds1992;Parent=gene2093;Dbxref=NCBI_GP:AEF83843.1;Name=AEF83843.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein OppD;protein_id=AEF83843.1;transl_table=11 CP001843.1 Genbank gene 2305612 2306499 . - . ID=gene2094;Name=TREPR_1957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1957 CP001843.1 Genbank CDS 2305612 2306499 . - 0 ID=cds1993;Parent=gene2094;Dbxref=NCBI_GP:AEF84817.1;Name=AEF84817.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=glutathione transport system permease protein GsiD;protein_id=AEF84817.1;transl_table=11 CP001843.1 Genbank gene 2306506 2307453 . - . ID=gene2095;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=TREPR_1956 CP001843.1 Genbank CDS 2306506 2307453 . - 0 ID=cds1994;Parent=gene2095;Dbxref=NCBI_GP:AEF85832.1;Name=AEF85832.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;gene=gsiC;product=glutathione ABC transporter%2C permease protein;protein_id=AEF85832.1;transl_table=11 CP001843.1 Genbank gene 2307511 2309124 . - . ID=gene2096;Name=TREPR_1955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1955 CP001843.1 Genbank CDS 2307511 2309124 . - 0 ID=cds1995;Parent=gene2096;Dbxref=NCBI_GP:AEF84574.1;Name=AEF84574.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=ABC transporter peptide-binding protein;protein_id=AEF84574.1;transl_table=11 CP001843.1 Genbank gene 2309297 2309866 . + . ID=gene2097;Name=TREPR_1954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1954 CP001843.1 Genbank CDS 2309297 2309866 . + 0 ID=cds1996;Parent=gene2097;Dbxref=NCBI_GP:AEF86037.1;Name=AEF86037.1;Note=identified by match to protein family HMM PF03358;gbkey=CDS;product=putative NADPH-dependent fmn reductase;protein_id=AEF86037.1;transl_table=11 CP001843.1 Genbank gene 2309998 2310390 . + . ID=gene2098;Name=TREPR_1952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1952 CP001843.1 Genbank CDS 2309998 2310390 . + 0 ID=cds1997;Parent=gene2098;Dbxref=NCBI_GP:AEF86042.1;Name=AEF86042.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;product=NimC/NimA family protein;protein_id=AEF86042.1;transl_table=11 CP001843.1 Genbank gene 2310380 2311498 . - . ID=gene2099;Name=TREPR_1953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1953 CP001843.1 Genbank CDS 2310380 2311498 . - 0 ID=cds1998;Parent=gene2099;Dbxref=NCBI_GP:AEF87005.1;Name=AEF87005.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF87005.1;transl_table=11 CP001843.1 Genbank gene 2311517 2312152 . - . ID=gene2100;Name=clpP_2;gbkey=Gene;gene=clpP_2;gene_biotype=protein_coding;locus_tag=TREPR_1951 CP001843.1 Genbank CDS 2311517 2312152 . - 0 ID=cds1999;Parent=gene2100;Dbxref=NCBI_GP:AEF84593.1;Name=AEF84593.1;Note=identified by match to protein family HMM PF00574;gbkey=CDS;gene=clpP_2;product=Clp protease;protein_id=AEF84593.1;transl_table=11 CP001843.1 Genbank gene 2312188 2312718 . - . ID=gene2101;Name=TREPR_1950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1950 CP001843.1 Genbank CDS 2312188 2312718 . - 0 ID=cds2000;Parent=gene2101;Dbxref=NCBI_GP:AEF83530.1;Name=AEF83530.1;Note=identified by match to protein family HMM PF02464%3B match to protein family HMM TIGR00199;gbkey=CDS;product=CinA domain protein;protein_id=AEF83530.1;transl_table=11 CP001843.1 Genbank gene 2312711 2313127 . - . ID=gene2102;Name=TREPR_1949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1949 CP001843.1 Genbank CDS 2312711 2313127 . - 0 ID=cds2001;Parent=gene2102;Dbxref=NCBI_GP:AEF85527.1;Name=AEF85527.1;Note=identified by match to protein family HMM PF04519;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85527.1;transl_table=11 CP001843.1 Genbank gene 2313111 2313848 . - . ID=gene2103;Name=TREPR_1948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1948 CP001843.1 Genbank CDS 2313111 2313848 . - 0 ID=cds2002;Parent=gene2103;Dbxref=NCBI_GP:AEF84752.1;Name=AEF84752.1;Note=identified by match to protein family HMM PF00072;gbkey=CDS;product=two-component hybrid sensor and regulator;protein_id=AEF84752.1;transl_table=11 CP001843.1 Genbank gene 2313848 2315476 . - . ID=gene2104;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=TREPR_1947 CP001843.1 Genbank CDS 2313848 2315476 . - 0 ID=cds2003;Parent=gene2104;Dbxref=NCBI_GP:AEF83562.1;Name=AEF83562.1;Note=identified by match to protein family HMM PF00795%3B match to protein family HMM TIGR00546;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=AEF83562.1;transl_table=11 CP001843.1 Genbank gene 2315473 2315883 . - . ID=gene2105;Name=TREPR_1946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1946 CP001843.1 Genbank CDS 2315473 2315883 . - 0 ID=cds2004;Parent=gene2105;Dbxref=NCBI_GP:AEF86319.1;Name=AEF86319.1;Note=identified by match to protein family HMM PF00216;gbkey=CDS;product=DNA-binding protein HBbu;protein_id=AEF86319.1;transl_table=11 CP001843.1 Genbank gene 2315944 2316219 . - . ID=gene2106;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=TREPR_1945 CP001843.1 Genbank CDS 2315944 2316219 . - 0 ID=cds2005;Parent=gene2106;Dbxref=NCBI_GP:AEF84288.1;Name=AEF84288.1;Note=identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029;gbkey=CDS;gene=rpsT;product=ribosomal protein S20;protein_id=AEF84288.1;transl_table=11 CP001843.1 Genbank gene 2316384 2316521 . + . ID=gene2107;Name=TREPR_1944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1944 CP001843.1 Genbank CDS 2316384 2316521 . + 0 ID=cds2006;Parent=gene2107;Dbxref=NCBI_GP:AEF83646.1;Name=AEF83646.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83646.1;transl_table=11 CP001843.1 Genbank gene 2316584 2317039 . - . ID=gene2108;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=TREPR_1943 CP001843.1 Genbank CDS 2316584 2317039 . - 0 ID=cds2007;Parent=gene2108;Dbxref=NCBI_GP:AEF84164.1;Name=AEF84164.1;Note=identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01120;gbkey=CDS;gene=rpiB;product=ribose-5-phosphate isomerase B;protein_id=AEF84164.1;transl_table=11 CP001843.1 Genbank gene 2317109 2317489 . + . ID=gene2109;Name=TREPR_1942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1942 CP001843.1 Genbank CDS 2317109 2317489 . + 0 ID=cds2008;Parent=gene2109;Dbxref=NCBI_GP:AEF84933.1;Name=AEF84933.1;Note=identified by match to protein family HMM PF01022%3B match to protein family HMM PF01325%3B match to protein family HMM PF02742;gbkey=CDS;product=manganese-dependent transcription regulator;protein_id=AEF84933.1;transl_table=11 CP001843.1 Genbank gene 2317452 2318273 . + . ID=gene2110;Name=TREPR_1941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1941 CP001843.1 Genbank CDS 2317452 2318273 . + 0 ID=cds2009;Parent=gene2110;Dbxref=NCBI_GP:AEF84798.1;Name=AEF84798.1;Note=identified by match to protein family HMM PF01189;gbkey=CDS;product=putative methyltransferase nsun4 (Nol1/nop2/sun domainfamily member 4);protein_id=AEF84798.1;transl_table=11 CP001843.1 Genbank gene 2318279 2319121 . - . ID=gene2111;Name=TREPR_1940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1940 CP001843.1 Genbank CDS 2318279 2319121 . - 0 ID=cds2010;Parent=gene2111;Dbxref=NCBI_GP:AEF85363.1;Name=AEF85363.1;Note=identified by match to protein family HMM PF01416;gbkey=CDS;product=tRNA pseudouridine synthase A (tRNA-uridine isomeraseI) (tRNA pseudouridylate synthase I) (PSU-I);protein_id=AEF85363.1;transl_table=11 CP001843.1 Genbank gene 2319114 2319980 . - . ID=gene2112;Name=TREPR_1939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1939 CP001843.1 Genbank CDS 2319114 2319980 . - 0 ID=cds2011;Parent=gene2112;Dbxref=NCBI_GP:AEF83563.1;Name=AEF83563.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83563.1;transl_table=11 CP001843.1 Genbank gene 2319988 2320362 . - . ID=gene2113;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=TREPR_1938 CP001843.1 Genbank CDS 2319988 2320362 . - 0 ID=cds2012;Parent=gene2113;Dbxref=NCBI_GP:AEF85189.1;Name=AEF85189.1;Note=identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00516%3B match to protein family HMM TIGR00556;gbkey=CDS;gene=acpS;product=holo-[acyl-carrier-protein] synthase;protein_id=AEF85189.1;transl_table=11 CP001843.1 Genbank gene 2320424 2321392 . - . ID=gene2114;Name=TREPR_1937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1937 CP001843.1 Genbank CDS 2320424 2321392 . - 0 ID=cds2013;Parent=gene2114;Dbxref=NCBI_GP:AEF85966.1;Name=AEF85966.1;Note=identified by match to protein family HMM PF07949;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85966.1;transl_table=11 CP001843.1 Genbank gene 2321382 2322239 . - . ID=gene2115;Name=TREPR_1936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1936 CP001843.1 Genbank CDS 2321382 2322239 . - 0 ID=cds2014;Parent=gene2115;Dbxref=NCBI_GP:AEF85569.1;Name=AEF85569.1;Note=identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85569.1;transl_table=11 CP001843.1 Genbank gene 2322314 2324239 . - . ID=gene2116;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=TREPR_1935 CP001843.1 Genbank CDS 2322314 2324239 . - 0 ID=cds2015;Parent=gene2116;Dbxref=NCBI_GP:AEF84181.1;Name=AEF84181.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00204;gbkey=CDS;gene=dxs;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=AEF84181.1;transl_table=11 CP001843.1 Genbank gene 2324428 2324568 . + . ID=gene2117;Name=TREPR_1934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1934 CP001843.1 Genbank CDS 2324428 2324568 . + 0 ID=cds2016;Parent=gene2117;Dbxref=NCBI_GP:AEF86578.1;Name=AEF86578.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86578.1;transl_table=11 CP001843.1 Genbank gene 2324934 2325068 . - . ID=gene2118;Name=TREPR_1933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1933 CP001843.1 Genbank CDS 2324934 2325068 . - 0 ID=cds2017;Parent=gene2118;Dbxref=NCBI_GP:AEF85602.1;Name=AEF85602.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85602.1;transl_table=11 CP001843.1 Genbank gene 2325141 2326001 . + . ID=gene2119;Name=TREPR_1932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1932 CP001843.1 Genbank CDS 2325141 2326001 . + 0 ID=cds2018;Parent=gene2119;Dbxref=NCBI_GP:AEF85059.1;Name=AEF85059.1;Note=identified by match to protein family HMM PF00669%3B match to protein family HMM PF00700;gbkey=CDS;product=flagellar filament 34.5 kDa core protein (Class B);protein_id=AEF85059.1;transl_table=11 CP001843.1 Genbank gene 2326331 2327185 . + . ID=gene2120;Name=TREPR_1931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1931 CP001843.1 Genbank CDS 2326331 2327185 . + 0 ID=cds2019;Parent=gene2120;Dbxref=NCBI_GP:AEF83636.1;Name=AEF83636.1;Note=identified by match to protein family HMM PF00669%3B match to protein family HMM PF00700;gbkey=CDS;product=flagellar filament 34.5 kDa core protein (Class B);protein_id=AEF83636.1;transl_table=11 CP001843.1 Genbank gene 2327342 2327725 . + . ID=gene2121;Name=TREPR_1930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1930 CP001843.1 Genbank CDS 2327342 2327725 . + 0 ID=cds2020;Parent=gene2121;Dbxref=NCBI_GP:AEF86680.1;Name=AEF86680.1;Note=identified by match to protein family HMM PF03646;gbkey=CDS;product=putative flagellin FlaG;protein_id=AEF86680.1;transl_table=11 CP001843.1 Genbank gene 2327787 2329817 . + . ID=gene2122;Name=TREPR_1929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1929 CP001843.1 Genbank CDS 2327787 2329817 . + 0 ID=cds2021;Parent=gene2122;Dbxref=NCBI_GP:AEF86134.1;Name=AEF86134.1;Note=identified by match to protein family HMM PF02465%3B match to protein family HMM PF07195;gbkey=CDS;product=flagellar hook-associated protein 2 (HAP2) (Filament cap protein)(Flagellar cap protein);protein_id=AEF86134.1;transl_table=11 CP001843.1 Genbank gene 2329829 2330788 . + . ID=gene2123;Name=TREPR_1928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1928 CP001843.1 Genbank CDS 2329829 2330788 . + 0 ID=cds2022;Parent=gene2123;Dbxref=NCBI_GP:AEF85142.1;Name=AEF85142.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85142.1;transl_table=11 CP001843.1 Genbank gene 2330805 2331899 . + . ID=gene2124;Name=TREPR_1927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1927 CP001843.1 Genbank CDS 2330805 2331899 . + 0 ID=cds2023;Parent=gene2124;Dbxref=NCBI_GP:AEF84398.1;Name=AEF84398.1;Note=identified by match to protein family HMM PF07238;gbkey=CDS;product=type IV pilus assembly protein PilZ;protein_id=AEF84398.1;transl_table=11 CP001843.1 Genbank gene 2331956 2332219 . + . ID=gene2125;Name=TREPR_1926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1926 CP001843.1 Genbank CDS 2331956 2332219 . + 0 ID=cds2024;Parent=gene2125;Dbxref=NCBI_GP:AEF85430.1;Name=AEF85430.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85430.1;transl_table=11 CP001843.1 Genbank gene 2332248 2332652 . + . ID=gene2126;Name=TREPR_1925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1925 CP001843.1 Genbank CDS 2332248 2332652 . + 0 ID=cds2025;Parent=gene2126;Dbxref=NCBI_GP:AEF85160.1;Name=AEF85160.1;Note=identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85160.1;transl_table=11 CP001843.1 Genbank gene 2332649 2333344 . + . ID=gene2127;Name=TREPR_1924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1924 CP001843.1 Genbank CDS 2332649 2333344 . + 0 ID=cds2026;Parent=gene2127;Dbxref=NCBI_GP:AEF86582.1;Name=AEF86582.1;Note=identified by match to protein family HMM PF00814;gbkey=CDS;product=peptidase%2C M22 family;protein_id=AEF86582.1;transl_table=11 CP001843.1 Genbank gene 2333381 2334538 . + . ID=gene2128;Name=TREPR_1923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1923 CP001843.1 Genbank CDS 2333381 2334538 . + 0 ID=cds2027;Parent=gene2128;Dbxref=NCBI_GP:AEF85423.1;Name=AEF85423.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=HD domain protein;protein_id=AEF85423.1;transl_table=11 CP001843.1 Genbank gene 2334544 2334777 . - . ID=gene2129;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=TREPR_1922 CP001843.1 Genbank CDS 2334544 2334777 . - 0 ID=cds2028;Parent=gene2129;Dbxref=NCBI_GP:AEF84995.1;Name=AEF84995.1;Note=identified by match to protein family HMM PF02599%3B match to protein family HMM TIGR00202;gbkey=CDS;gene=csrA;product=carbon storage regulator;protein_id=AEF84995.1;transl_table=11 CP001843.1 Genbank gene 2334771 2335220 . - . ID=gene2130;Name=TREPR_1921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1921 CP001843.1 Genbank CDS 2334771 2335220 . - 0 ID=cds2029;Parent=gene2130;Dbxref=NCBI_GP:AEF84043.1;Name=AEF84043.1;Note=identified by match to protein family HMM PF02623;gbkey=CDS;product=flagellar assembly factor FliW;protein_id=AEF84043.1;transl_table=11 CP001843.1 Genbank gene 2335249 2336496 . - . ID=gene2131;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=TREPR_1920 CP001843.1 Genbank CDS 2335249 2336496 . - 0 ID=cds2030;Parent=gene2131;Dbxref=NCBI_GP:AEF86064.1;Name=AEF86064.1;Note=identified by match to protein family HMM PF00669%3B match to protein family HMM PF07196%3B match to protein family HMM TIGR02550;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein 3;protein_id=AEF86064.1;transl_table=11 CP001843.1 Genbank gene 2336555 2338435 . - . ID=gene2132;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=TREPR_1919 CP001843.1 Genbank CDS 2336555 2338435 . - 0 ID=cds2031;Parent=gene2132;Dbxref=NCBI_GP:AEF85011.1;Name=AEF85011.1;Note=identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR02492;gbkey=CDS;gene=flgK;product=flagellar hook-associated protein FlgK;protein_id=AEF85011.1;transl_table=11 CP001843.1 Genbank gene 2338447 2338938 . - . ID=gene2133;Name=TREPR_1918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1918 CP001843.1 Genbank CDS 2338447 2338938 . - 0 ID=cds2032;Parent=gene2133;Dbxref=NCBI_GP:AEF84493.1;Name=AEF84493.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84493.1;transl_table=11 CP001843.1 Genbank gene 2339101 2339175 . - . ID=gene2134;Name=TREPR_3923;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3923 CP001843.1 Genbank tRNA 2339101 2339175 . - . ID=rna39;Parent=gene2134;gbkey=tRNA;product=tRNA-His CP001843.1 Genbank exon 2339101 2339175 . - . ID=id44;Parent=rna39;gbkey=tRNA;product=tRNA-His CP001843.1 Genbank gene 2339271 2339921 . - . ID=gene2135;Name=TREPR_1916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1916 CP001843.1 Genbank CDS 2339271 2339921 . - 0 ID=cds2033;Parent=gene2135;Dbxref=NCBI_GP:AEF83741.1;Name=AEF83741.1;Note=identified by match to protein family HMM PF03358;gbkey=CDS;product=multimeric flavodoxin;protein_id=AEF83741.1;transl_table=11 CP001843.1 Genbank gene 2340047 2340120 . + . ID=gene2136;Name=TREPR_3922;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3922 CP001843.1 Genbank tRNA 2340047 2340120 . + . ID=rna40;Parent=gene2136;gbkey=tRNA;product=tRNA-Val CP001843.1 Genbank exon 2340047 2340120 . + . ID=id45;Parent=rna40;gbkey=tRNA;product=tRNA-Val CP001843.1 Genbank gene 2340265 2340993 . - . ID=gene2137;Name=TREPR_1913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1913 CP001843.1 Genbank CDS 2340265 2340993 . - 0 ID=cds2034;Parent=gene2137;Dbxref=NCBI_GP:AEF84700.1;Name=AEF84700.1;Note=identified by match to protein family HMM PF01553%3B match to protein family HMM TIGR00530%3B 1-agp acyltransferase%3B 1-agpat%3B lysophosphatidic acidacyltransferase%3B lpaat;gbkey=CDS;product=probable 1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=AEF84700.1;transl_table=11 CP001843.1 Genbank gene 2341026 2341655 . - . ID=gene2138;Name=TREPR_1912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1912 CP001843.1 Genbank CDS 2341026 2341655 . - 0 ID=cds2035;Parent=gene2138;Dbxref=NCBI_GP:AEF85939.1;Name=AEF85939.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;product=HAD-superfamily hydrolase%2C subfamily IA%2C variant 3;protein_id=AEF85939.1;transl_table=11 CP001843.1 Genbank gene 2341678 2345115 . - . ID=gene2139;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=TREPR_1911 CP001843.1 Genbank CDS 2341678 2345115 . - 0 ID=cds2036;Parent=gene2139;Dbxref=NCBI_GP:AEF86715.1;Name=AEF86715.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM TIGR00580;gbkey=CDS;gene=mfd;product=transcription-repair coupling factor;protein_id=AEF86715.1;transl_table=11 CP001843.1 Genbank pseudogene 2345269 2346066 . + . ID=gene2140;Name=TREPR_1909;Note=hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1909;pseudo=true CP001843.1 Genbank gene 2346228 2346422 . + . ID=gene2141;Name=TREPR_1908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1908 CP001843.1 Genbank CDS 2346228 2346422 . + 0 ID=cds2037;Parent=gene2141;Dbxref=NCBI_GP:AEF86871.1;Name=AEF86871.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86871.1;transl_table=11 CP001843.1 Genbank gene 2346499 2347791 . + . ID=gene2142;Name=TREPR_1907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1907 CP001843.1 Genbank CDS 2346499 2347791 . + 0 ID=cds2038;Parent=gene2142;Dbxref=NCBI_GP:AEF83735.1;Name=AEF83735.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83735.1;transl_table=11 CP001843.1 Genbank gene 2347818 2348216 . + . ID=gene2143;Name=TREPR_1906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1906 CP001843.1 Genbank CDS 2347818 2348216 . + 0 ID=cds2039;Parent=gene2143;Dbxref=NCBI_GP:AEF84487.1;Name=AEF84487.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84487.1;transl_table=11 CP001843.1 Genbank gene 2348217 2348582 . + . ID=gene2144;Name=TREPR_1905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1905 CP001843.1 Genbank CDS 2348217 2348582 . + 0 ID=cds2040;Parent=gene2144;Dbxref=NCBI_GP:AEF85710.1;Name=AEF85710.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85710.1;transl_table=11 CP001843.1 Genbank gene 2348598 2349218 . + . ID=gene2145;Name=TREPR_1904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1904 CP001843.1 Genbank CDS 2348598 2349218 . + 0 ID=cds2041;Parent=gene2145;Dbxref=NCBI_GP:AEF83924.1;Name=AEF83924.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83924.1;transl_table=11 CP001843.1 Genbank gene 2349263 2350318 . + . ID=gene2146;Name=TREPR_1903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1903 CP001843.1 Genbank CDS 2349263 2350318 . + 0 ID=cds2042;Parent=gene2146;Dbxref=NCBI_GP:AEF84481.1;Name=AEF84481.1;Note=identified by match to protein family HMM PF00665;gbkey=CDS;product=putative transposase;protein_id=AEF84481.1;transl_table=11 CP001843.1 Genbank gene 2350601 2353684 . - . ID=gene2147;Name=TREPR_1901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1901 CP001843.1 Genbank CDS 2350601 2353684 . - 0 ID=cds2043;Parent=gene2147;Dbxref=NCBI_GP:AEF86914.1;Name=AEF86914.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86914.1;transl_table=11 CP001843.1 Genbank gene 2353882 2354517 . + . ID=gene2148;Name=TREPR_1899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1899 CP001843.1 Genbank CDS 2353882 2354517 . + 0 ID=cds2044;Parent=gene2148;Dbxref=NCBI_GP:AEF84902.1;Name=AEF84902.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84902.1;transl_table=11 CP001843.1 Genbank gene 2354582 2355064 . - . ID=gene2149;Name=TREPR_1898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1898 CP001843.1 Genbank CDS 2354582 2355064 . - 0 ID=cds2045;Parent=gene2149;Dbxref=NCBI_GP:AEF86586.1;Name=AEF86586.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86586.1;transl_table=11 CP001843.1 Genbank gene 2355045 2358128 . - . ID=gene2150;Name=TREPR_1897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1897 CP001843.1 Genbank CDS 2355045 2358128 . - 0 ID=cds2046;Parent=gene2150;Dbxref=NCBI_GP:AEF85615.1;Name=AEF85615.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85615.1;transl_table=11 CP001843.1 Genbank gene 2358212 2358688 . - . ID=gene2151;Name=TREPR_1896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1896 CP001843.1 Genbank CDS 2358212 2358688 . - 0 ID=cds2047;Parent=gene2151;Dbxref=NCBI_GP:AEF84602.1;Name=AEF84602.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84602.1;transl_table=11 CP001843.1 Genbank gene 2358771 2361188 . - . ID=gene2152;Name=TREPR_1895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1895 CP001843.1 Genbank CDS 2358771 2361188 . - 0 ID=cds2048;Parent=gene2152;Dbxref=NCBI_GP:AEF85913.1;Name=AEF85913.1;Note=identified by match to protein family HMM PF00560;gbkey=CDS;product=leucine Rich Repeat domain protein;protein_id=AEF85913.1;transl_table=11 CP001843.1 Genbank gene 2361429 2361629 . + . ID=gene2153;Name=TREPR_1894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1894 CP001843.1 Genbank CDS 2361429 2361629 . + 0 ID=cds2049;Parent=gene2153;Dbxref=NCBI_GP:AEF85126.1;Name=AEF85126.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85126.1;transl_table=11 CP001843.1 Genbank gene 2361669 2362583 . + . ID=gene2154;Name=TREPR_1892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1892 CP001843.1 Genbank CDS 2361669 2362583 . + 0 ID=cds2050;Parent=gene2154;Dbxref=NCBI_GP:AEF83744.1;Name=AEF83744.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83744.1;transl_table=11 CP001843.1 Genbank gene 2362687 2364162 . - . ID=gene2155;Name=TREPR_1891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1891 CP001843.1 Genbank CDS 2362687 2364162 . - 0 ID=cds2051;Parent=gene2155;Dbxref=NCBI_GP:AEF86476.1;Name=AEF86476.1;gbkey=CDS;product=phosphomethylpyrimidine kinase;protein_id=AEF86476.1;transl_table=11 CP001843.1 Genbank gene 2364199 2365062 . - . ID=gene2156;Name=TREPR_1890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1890 CP001843.1 Genbank CDS 2364199 2365062 . - 0 ID=cds2052;Parent=gene2156;Dbxref=NCBI_GP:AEF85623.1;Name=AEF85623.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85623.1;transl_table=11 CP001843.1 Genbank gene 2365308 2365517 . + . ID=gene2157;Name=TREPR_1888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1888 CP001843.1 Genbank CDS 2365308 2365517 . + 0 ID=cds2053;Parent=gene2157;Dbxref=NCBI_GP:AEF86645.1;Name=AEF86645.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86645.1;transl_table=11 CP001843.1 Genbank gene 2365565 2365750 . - . ID=gene2158;Name=TREPR_1887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1887 CP001843.1 Genbank CDS 2365565 2365750 . - 0 ID=cds2054;Parent=gene2158;Dbxref=NCBI_GP:AEF85653.1;Name=AEF85653.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85653.1;transl_table=11 CP001843.1 Genbank gene 2365803 2366042 . - . ID=gene2159;Name=TREPR_1886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1886 CP001843.1 Genbank CDS 2365803 2366042 . - 0 ID=cds2055;Parent=gene2159;Dbxref=NCBI_GP:AEF84653.1;Name=AEF84653.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84653.1;transl_table=11 CP001843.1 Genbank gene 2366044 2366628 . - . ID=gene2160;Name=TREPR_1885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1885 CP001843.1 Genbank CDS 2366044 2366628 . - 0 ID=cds2056;Parent=gene2160;Dbxref=NCBI_GP:AEF86628.1;Name=AEF86628.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86628.1;transl_table=11 CP001843.1 Genbank gene 2366628 2369609 . - . ID=gene2161;Name=TREPR_1884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1884 CP001843.1 Genbank CDS 2366628 2369609 . - 0 ID=cds2057;Parent=gene2161;Dbxref=NCBI_GP:AEF84389.1;Name=AEF84389.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84389.1;transl_table=11 CP001843.1 Genbank gene 2369624 2370436 . - . ID=gene2162;Name=TREPR_1883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1883 CP001843.1 Genbank CDS 2369624 2370436 . - 0 ID=cds2058;Parent=gene2162;Dbxref=NCBI_GP:AEF85156.1;Name=AEF85156.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85156.1;transl_table=11 CP001843.1 Genbank gene 2370460 2371053 . - . ID=gene2163;Name=TREPR_1882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1882 CP001843.1 Genbank CDS 2370460 2371053 . - 0 ID=cds2059;Parent=gene2163;Dbxref=NCBI_GP:AEF83523.1;Name=AEF83523.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83523.1;transl_table=11 CP001843.1 Genbank gene 2371044 2371898 . - . ID=gene2164;Name=TREPR_1881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1881 CP001843.1 Genbank CDS 2371044 2371898 . - 0 ID=cds2060;Parent=gene2164;Dbxref=NCBI_GP:AEF86298.1;Name=AEF86298.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86298.1;transl_table=11 CP001843.1 Genbank gene 2372140 2374617 . - . ID=gene2165;Name=TREPR_1879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1879 CP001843.1 Genbank CDS 2372140 2374617 . - 0 ID=cds2061;Parent=gene2165;Dbxref=NCBI_GP:AEF85231.1;Name=AEF85231.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=PAS domain protein;protein_id=AEF85231.1;transl_table=11 CP001843.1 Genbank gene 2374859 2376535 . + . ID=gene2166;Name=TREPR_1878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1878 CP001843.1 Genbank CDS 2374859 2376535 . + 0 ID=cds2062;Parent=gene2166;Dbxref=NCBI_GP:AEF84252.1;Name=AEF84252.1;Note=identified by match to protein family HMM PF00004;gbkey=CDS;product=ATPase%2C AAA family;protein_id=AEF84252.1;transl_table=11 CP001843.1 Genbank gene 2376614 2377168 . + . ID=gene2167;Name=TREPR_1877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1877 CP001843.1 Genbank CDS 2376614 2377168 . + 0 ID=cds2063;Parent=gene2167;Dbxref=NCBI_GP:AEF86804.1;Name=AEF86804.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86804.1;transl_table=11 CP001843.1 Genbank gene 2377170 2377439 . + . ID=gene2168;Name=TREPR_1876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1876 CP001843.1 Genbank CDS 2377170 2377439 . + 0 ID=cds2064;Parent=gene2168;Dbxref=NCBI_GP:AEF85821.1;Name=AEF85821.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85821.1;transl_table=11 CP001843.1 Genbank gene 2377522 2377722 . - . ID=gene2169;Name=TREPR_1875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1875 CP001843.1 Genbank CDS 2377522 2377722 . - 0 ID=cds2065;Parent=gene2169;Dbxref=NCBI_GP:AEF83571.1;Name=AEF83571.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83571.1;transl_table=11 CP001843.1 Genbank gene 2377801 2377938 . + . ID=gene2170;Name=TREPR_1874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1874 CP001843.1 Genbank CDS 2377801 2377938 . + 0 ID=cds2066;Parent=gene2170;Dbxref=NCBI_GP:AEF86500.1;Name=AEF86500.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86500.1;transl_table=11 CP001843.1 Genbank gene 2377935 2378966 . + . ID=gene2171;Name=TREPR_1873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1873 CP001843.1 Genbank CDS 2377935 2378966 . + 0 ID=cds2067;Parent=gene2171;Dbxref=NCBI_GP:AEF86058.1;Name=AEF86058.1;gbkey=CDS;product=putative helix-turn-helix%2C type 11 domain protein;protein_id=AEF86058.1;transl_table=11 CP001843.1 Genbank gene 2379201 2379716 . + . ID=gene2172;Name=TREPR_1871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1871 CP001843.1 Genbank CDS 2379201 2379716 . + 0 ID=cds2068;Parent=gene2172;Dbxref=NCBI_GP:AEF86292.1;Name=AEF86292.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86292.1;transl_table=11 CP001843.1 Genbank gene 2379788 2379907 . + . ID=gene2173;Name=TREPR_1870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1870 CP001843.1 Genbank CDS 2379788 2379907 . + 0 ID=cds2069;Parent=gene2173;Dbxref=NCBI_GP:AEF85516.1;Name=AEF85516.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85516.1;transl_table=11 CP001843.1 Genbank gene 2380202 2380645 . + . ID=gene2174;Name=TREPR_1869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1869 CP001843.1 Genbank CDS 2380202 2380645 . + 0 ID=cds2070;Parent=gene2174;Dbxref=NCBI_GP:AEF84362.1;Name=AEF84362.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84362.1;transl_table=11 CP001843.1 Genbank gene 2380970 2382556 . + . ID=gene2175;Name=TREPR_1867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1867 CP001843.1 Genbank CDS 2380970 2382556 . + 0 ID=cds2071;Parent=gene2175;Dbxref=NCBI_GP:AEF86368.1;Name=AEF86368.1;gbkey=CDS;product=surface antigen BspA;protein_id=AEF86368.1;transl_table=11 CP001843.1 Genbank gene 2382596 2383660 . + . ID=gene2176;Name=TREPR_1866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1866 CP001843.1 Genbank CDS 2382596 2383660 . + 0 ID=cds2072;Parent=gene2176;Dbxref=NCBI_GP:AEF85383.1;Name=AEF85383.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85383.1;transl_table=11 CP001843.1 Genbank gene 2384012 2384203 . + . ID=gene2177;Name=TREPR_1865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1865 CP001843.1 Genbank CDS 2384012 2384203 . + 0 ID=cds2073;Parent=gene2177;Dbxref=NCBI_GP:AEF83773.1;Name=AEF83773.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83773.1;transl_table=11 CP001843.1 Genbank gene 2385490 2385831 . + . ID=gene2178;Name=TREPR_1863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1863 CP001843.1 Genbank CDS 2385490 2385831 . + 0 ID=cds2074;Parent=gene2178;Dbxref=NCBI_GP:AEF85741.1;Name=AEF85741.1;Note=identified by match to protein family HMM PF02452;gbkey=CDS;product=transcriptional modulator of MazE/toxin%2C MazF;protein_id=AEF85741.1;transl_table=11 CP001843.1 Genbank gene 2385884 2386585 . - . ID=gene2179;Name=TREPR_1862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1862 CP001843.1 Genbank CDS 2385884 2386585 . - 0 ID=cds2075;Parent=gene2179;Dbxref=NCBI_GP:AEF85744.1;Name=AEF85744.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85744.1;transl_table=11 CP001843.1 Genbank gene 2386659 2387867 . + . ID=gene2180;Name=TREPR_1861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1861 CP001843.1 Genbank CDS 2386659 2387867 . + 0 ID=cds2076;Parent=gene2180;Dbxref=NCBI_GP:AEF85340.1;Name=AEF85340.1;Note=identified by match to protein family HMM PF02518;gbkey=CDS;product=putative signal transduction histidine kinase;protein_id=AEF85340.1;transl_table=11 CP001843.1 Genbank gene 2387864 2388469 . + . ID=gene2181;Name=TREPR_1860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1860 CP001843.1 Genbank CDS 2387864 2388469 . + 0 ID=cds2077;Parent=gene2181;Dbxref=NCBI_GP:AEF86356.1;Name=AEF86356.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=two component transcriptional regulator%2C LuxR family;protein_id=AEF86356.1;transl_table=11 CP001843.1 Genbank gene 2388501 2389160 . + . ID=gene2182;Name=TREPR_1859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1859 CP001843.1 Genbank CDS 2388501 2389160 . + 0 ID=cds2078;Parent=gene2182;Dbxref=NCBI_GP:AEF85269.1;Name=AEF85269.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85269.1;transl_table=11 CP001843.1 Genbank gene 2389210 2390109 . + . ID=gene2183;Name=TREPR_1858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1858 CP001843.1 Genbank CDS 2389210 2390109 . + 0 ID=cds2079;Parent=gene2183;Dbxref=NCBI_GP:AEF85367.1;Name=AEF85367.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85367.1;transl_table=11 CP001843.1 Genbank gene 2390554 2391981 . + . ID=gene2184;Name=TREPR_1856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1856 CP001843.1 Genbank CDS 2390554 2391981 . + 0 ID=cds2080;Parent=gene2184;Dbxref=NCBI_GP:AEF84075.1;Name=AEF84075.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF84075.1;transl_table=11 CP001843.1 Genbank gene 2392044 2393177 . + . ID=gene2185;Name=TREPR_1855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1855 CP001843.1 Genbank CDS 2392044 2393177 . + 0 ID=cds2081;Parent=gene2185;Dbxref=NCBI_GP:AEF85732.1;Name=AEF85732.1;Note=identified by match to protein family HMM PF03781;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85732.1;transl_table=11 CP001843.1 Genbank gene 2393167 2394330 . + . ID=gene2186;Name=TREPR_1854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1854 CP001843.1 Genbank CDS 2393167 2394330 . + 0 ID=cds2082;Parent=gene2186;Dbxref=NCBI_GP:AEF85715.1;Name=AEF85715.1;Note=identified by match to protein family HMM PF03781;gbkey=CDS;product=XylR;protein_id=AEF85715.1;transl_table=11 CP001843.1 Genbank gene 2394374 2395033 . + . ID=gene2187;Name=TREPR_1853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1853 CP001843.1 Genbank CDS 2394374 2395033 . + 0 ID=cds2083;Parent=gene2187;Dbxref=NCBI_GP:AEF86479.1;Name=AEF86479.1;Note=identified by match to protein family HMM PF00196%3B match to protein family HMM PF08281;gbkey=CDS;product=sigma-70%2C region 4 family;protein_id=AEF86479.1;transl_table=11 CP001843.1 Genbank gene 2395047 2396366 . + . ID=gene2188;Name=TREPR_1852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1852 CP001843.1 Genbank CDS 2395047 2396366 . + 0 ID=cds2084;Parent=gene2188;Dbxref=NCBI_GP:AEF86141.1;Name=AEF86141.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86141.1;transl_table=11 CP001843.1 Genbank gene 2396380 2397186 . + . ID=gene2189;Name=TREPR_1851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1851 CP001843.1 Genbank CDS 2396380 2397186 . + 0 ID=cds2085;Parent=gene2189;Dbxref=NCBI_GP:AEF85397.1;Name=AEF85397.1;Note=identified by match to protein family HMM PF00092;gbkey=CDS;product=von Willebrand factor type A domain protein;protein_id=AEF85397.1;transl_table=11 CP001843.1 Genbank gene 2397257 2398123 . + . ID=gene2190;Name=TREPR_1850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1850 CP001843.1 Genbank CDS 2397257 2398123 . + 0 ID=cds2086;Parent=gene2190;Dbxref=NCBI_GP:AEF86388.1;Name=AEF86388.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86388.1;transl_table=11 CP001843.1 Genbank gene 2398134 2398739 . + . ID=gene2191;Name=TREPR_1849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1849 CP001843.1 Genbank CDS 2398134 2398739 . + 0 ID=cds2087;Parent=gene2191;Dbxref=NCBI_GP:AEF84557.1;Name=AEF84557.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84557.1;transl_table=11 CP001843.1 Genbank gene 2398751 2399452 . + . ID=gene2192;Name=TREPR_1848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1848 CP001843.1 Genbank CDS 2398751 2399452 . + 0 ID=cds2088;Parent=gene2192;Dbxref=NCBI_GP:AEF85609.1;Name=AEF85609.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85609.1;transl_table=11 CP001843.1 Genbank gene 2399456 2401438 . + . ID=gene2193;Name=TREPR_1847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1847 CP001843.1 Genbank CDS 2399456 2401438 . + 0 ID=cds2089;Parent=gene2193;Dbxref=NCBI_GP:AEF86581.1;Name=AEF86581.1;Note=identified by match to protein family HMM PF04679;gbkey=CDS;product=ATP dependent DNA ligase C region family;protein_id=AEF86581.1;transl_table=11 CP001843.1 Genbank gene 2401560 2402393 . - . ID=gene2194;Name=TREPR_1846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1846 CP001843.1 Genbank CDS 2401560 2402393 . - 0 ID=cds2090;Parent=gene2194;Dbxref=NCBI_GP:AEF84066.1;Name=AEF84066.1;Note=identified by match to protein family HMM PF01226;gbkey=CDS;product=FdhC protein;protein_id=AEF84066.1;transl_table=11 CP001843.1 Genbank binding_site 2402665 2402879 . - . ID=id46;Note=Cobalamin riboswitch%3B Rfam score 51.37;bound_moiety=adenosylcobalamin;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00174 CP001843.1 Genbank gene 2403187 2403259 . - . ID=gene2195;Name=TREPR_3920;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3920 CP001843.1 Genbank tRNA 2403187 2403259 . - . ID=rna41;Parent=gene2195;gbkey=tRNA;product=tRNA-Lys CP001843.1 Genbank exon 2403187 2403259 . - . ID=id47;Parent=rna41;gbkey=tRNA;product=tRNA-Lys CP001843.1 Genbank gene 2403296 2404906 . - . ID=gene2196;Name=TREPR_1844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1844 CP001843.1 Genbank CDS 2403296 2404906 . - 0 ID=cds2091;Parent=gene2196;Dbxref=NCBI_GP:AEF85833.1;Name=AEF85833.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089;gbkey=CDS;product=2-methylthioadenine synthetase;protein_id=AEF85833.1;transl_table=11 CP001843.1 Genbank gene 2404911 2405543 . - . ID=gene2197;Name=TREPR_1843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1843 CP001843.1 Genbank CDS 2404911 2405543 . - 0 ID=cds2092;Parent=gene2197;Dbxref=NCBI_GP:AEF86579.1;Name=AEF86579.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF86579.1;transl_table=11 CP001843.1 Genbank gene 2405550 2405924 . - . ID=gene2198;Name=TREPR_1842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1842 CP001843.1 Genbank CDS 2405550 2405924 . - 0 ID=cds2093;Parent=gene2198;Dbxref=NCBI_GP:AEF83805.1;Name=AEF83805.1;Note=identified by match to protein family HMM PF04519;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83805.1;transl_table=11 CP001843.1 Genbank gene 2406113 2407111 . + . ID=gene2199;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=TREPR_1841 CP001843.1 Genbank CDS 2406113 2407111 . + 0 ID=cds2094;Parent=gene2199;Dbxref=NCBI_GP:AEF86462.1;Name=AEF86462.1;Note=identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651;gbkey=CDS;gene=pta;product=phosphate acetyltransferase;protein_id=AEF86462.1;transl_table=11 CP001843.1 Genbank gene 2407225 2407581 . - . ID=gene2200;Name=TREPR_1840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1840 CP001843.1 Genbank CDS 2407225 2407581 . - 0 ID=cds2095;Parent=gene2200;Dbxref=NCBI_GP:AEF85315.1;Name=AEF85315.1;Note=identified by match to protein family HMM PF04205;gbkey=CDS;product=FMN-binding domain protein;protein_id=AEF85315.1;transl_table=11 CP001843.1 Genbank gene 2407593 2409350 . - . ID=gene2201;Name=TREPR_1839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1839 CP001843.1 Genbank CDS 2407593 2409350 . - 0 ID=cds2096;Parent=gene2201;Dbxref=NCBI_GP:AEF84516.1;Name=AEF84516.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896;gbkey=CDS;product=pyruvate%2C phosphate dikinase (Pyruvate%2C orthophosphatedikinase);protein_id=AEF84516.1;transl_table=11 CP001843.1 Genbank gene 2409350 2410426 . - . ID=gene2202;Name=TREPR_1838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1838 CP001843.1 Genbank CDS 2409350 2410426 . - 0 ID=cds2097;Parent=gene2202;Dbxref=NCBI_GP:AEF86835.1;Name=AEF86835.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86835.1;transl_table=11 CP001843.1 Genbank gene 2410519 2411517 . + . ID=gene2203;Name=TREPR_1836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1836 CP001843.1 Genbank CDS 2410519 2411517 . + 0 ID=cds2098;Parent=gene2203;Dbxref=NCBI_GP:AEF86109.1;Name=AEF86109.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;product=DHH family protein;protein_id=AEF86109.1;transl_table=11 CP001843.1 Genbank gene 2411514 2413019 . + . ID=gene2204;Name=TREPR_1835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1835 CP001843.1 Genbank CDS 2411514 2413019 . + 0 ID=cds2099;Parent=gene2204;Dbxref=NCBI_GP:AEF84843.1;Name=AEF84843.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84843.1;transl_table=11 CP001843.1 Genbank gene 2413474 2416089 . + . ID=gene2205;Name=TREPR_1834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1834 CP001843.1 Genbank CDS 2413474 2416089 . + 0 ID=cds2100;Parent=gene2205;Dbxref=NCBI_GP:AEF84137.1;Name=AEF84137.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02151%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728;gbkey=CDS;product=negative regulator of genetic competence ClpC/MecB;protein_id=AEF84137.1;transl_table=11 CP001843.1 Genbank gene 2416114 2417388 . - . ID=gene2206;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=TREPR_1833 CP001843.1 Genbank CDS 2416114 2417388 . - 0 ID=cds2101;Parent=gene2206;Dbxref=NCBI_GP:AEF84900.1;Name=AEF84900.1;Note=identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02091;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=AEF84900.1;transl_table=11 CP001843.1 Genbank gene 2417500 2419953 . + . ID=gene2207;Name=TREPR_1832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1832 CP001843.1 Genbank CDS 2417500 2419953 . + 0 ID=cds2102;Parent=gene2207;Dbxref=NCBI_GP:AEF84095.1;Name=AEF84095.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF09369;gbkey=CDS;product=dead/deah box helicase domain protein;protein_id=AEF84095.1;transl_table=11 CP001843.1 Genbank gene 2419943 2421256 . + . ID=gene2208;Name=TREPR_1831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1831 CP001843.1 Genbank CDS 2419943 2421256 . + 0 ID=cds2103;Parent=gene2208;Dbxref=NCBI_GP:AEF83695.1;Name=AEF83695.1;gbkey=CDS;product=YprB;protein_id=AEF83695.1;transl_table=11 CP001843.1 Genbank gene 2421231 2421662 . + . ID=gene2209;Name=TREPR_1830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1830 CP001843.1 Genbank CDS 2421231 2421662 . + 0 ID=cds2104;Parent=gene2209;Dbxref=NCBI_GP:AEF86962.1;Name=AEF86962.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase%2C GNAT family;protein_id=AEF86962.1;transl_table=11 CP001843.1 Genbank gene 2421697 2422290 . + . ID=gene2210;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=TREPR_1829 CP001843.1 Genbank CDS 2421697 2422290 . + 0 ID=cds2105;Parent=gene2210;Dbxref=NCBI_GP:AEF85720.1;Name=AEF85720.1;Note=identified by match to protein family HMM PF01330%3B match to protein family HMM TIGR00084;gbkey=CDS;gene=ruvA;product=holliday junction DNA helicase RuvA;protein_id=AEF85720.1;transl_table=11 CP001843.1 Genbank gene 2422354 2423382 . + . ID=gene2211;Name=TREPR_1828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1828 CP001843.1 Genbank CDS 2422354 2423382 . + 0 ID=cds2106;Parent=gene2211;Dbxref=NCBI_GP:AEF84450.1;Name=AEF84450.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84450.1;transl_table=11 CP001843.1 Genbank gene 2423727 2424614 . + . ID=gene2212;Name=TREPR_1827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1827 CP001843.1 Genbank CDS 2423727 2424614 . + 0 ID=cds2107;Parent=gene2212;Dbxref=NCBI_GP:AEF86489.1;Name=AEF86489.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=AEF86489.1;transl_table=11 CP001843.1 Genbank gene 2424698 2426923 . + . ID=gene2213;Name=TREPR_1826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1826 CP001843.1 Genbank CDS 2424698 2426923 . + 0 ID=cds2108;Parent=gene2213;Dbxref=NCBI_GP:AEF85699.1;Name=AEF85699.1;Note=identified by match to protein family HMM PF00004;gbkey=CDS;product=putative AAA ATPase;protein_id=AEF85699.1;transl_table=11 CP001843.1 Genbank gene 2426925 2427068 . + . ID=gene2214;Name=TREPR_1825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1825 CP001843.1 Genbank CDS 2426925 2427068 . + 0 ID=cds2109;Parent=gene2214;Dbxref=NCBI_GP:AEF85729.1;Name=AEF85729.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85729.1;transl_table=11 CP001843.1 Genbank gene 2427236 2427619 . + . ID=gene2215;Name=TREPR_1824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1824 CP001843.1 Genbank CDS 2427236 2427619 . + 0 ID=cds2110;Parent=gene2215;Dbxref=NCBI_GP:AEF84952.1;Name=AEF84952.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84952.1;transl_table=11 CP001843.1 Genbank gene 2427678 2428442 . + . ID=gene2216;Name=TREPR_1823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1823 CP001843.1 Genbank CDS 2427678 2428442 . + 0 ID=cds2111;Parent=gene2216;Dbxref=NCBI_GP:AEF87024.1;Name=AEF87024.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;product=Ser/Thr protein phosphatase family protein;protein_id=AEF87024.1;transl_table=11 CP001843.1 Genbank gene 2428503 2428907 . + . ID=gene2217;Name=TREPR_1822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1822 CP001843.1 Genbank CDS 2428503 2428907 . + 0 ID=cds2112;Parent=gene2217;Dbxref=NCBI_GP:AEF85346.1;Name=AEF85346.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85346.1;transl_table=11 CP001843.1 Genbank gene 2428904 2429317 . + . ID=gene2218;Name=TREPR_1821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1821 CP001843.1 Genbank CDS 2428904 2429317 . + 0 ID=cds2113;Parent=gene2218;Dbxref=NCBI_GP:AEF84943.1;Name=AEF84943.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84943.1;transl_table=11 CP001843.1 Genbank gene 2429364 2430167 . + . ID=gene2219;Name=TREPR_1820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1820 CP001843.1 Genbank CDS 2429364 2430167 . + 0 ID=cds2114;Parent=gene2219;Dbxref=NCBI_GP:AEF85984.1;Name=AEF85984.1;Note=identified by match to protein family HMM PF03747;gbkey=CDS;product=ADP-ribosylglycohydrolase family protein;protein_id=AEF85984.1;transl_table=11 CP001843.1 Genbank gene 2430176 2432812 . + . ID=gene2220;Name=TREPR_1819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1819 CP001843.1 Genbank CDS 2430176 2432812 . + 0 ID=cds2115;Parent=gene2220;Dbxref=NCBI_GP:AEF86592.1;Name=AEF86592.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86592.1;transl_table=11 CP001843.1 Genbank gene 2432809 2435967 . + . ID=gene2221;Name=TREPR_1818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1818 CP001843.1 Genbank CDS 2432809 2435967 . + 0 ID=cds2116;Parent=gene2221;Dbxref=NCBI_GP:AEF83964.1;Name=AEF83964.1;Note=identified by match to protein family HMM PF00580;gbkey=CDS;product=putative UvrD/REP helicase;protein_id=AEF83964.1;transl_table=11 CP001843.1 Genbank gene 2436052 2436645 . + . ID=gene2222;Name=TREPR_1816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1816 CP001843.1 Genbank CDS 2436052 2436645 . + 0 ID=cds2117;Parent=gene2222;Dbxref=NCBI_GP:AEF86513.1;Name=AEF86513.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86513.1;transl_table=11 CP001843.1 Genbank gene 2436716 2438041 . + . ID=gene2223;Name=TREPR_1815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1815 CP001843.1 Genbank CDS 2436716 2438041 . + 0 ID=cds2118;Parent=gene2223;Dbxref=NCBI_GP:AEF83584.1;Name=AEF83584.1;Note=identified by match to protein family HMM PF03235;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83584.1;transl_table=11 CP001843.1 Genbank gene 2438038 2440005 . + . ID=gene2224;Name=TREPR_1814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1814 CP001843.1 Genbank CDS 2438038 2440005 . + 0 ID=cds2119;Parent=gene2224;Dbxref=NCBI_GP:AEF84579.1;Name=AEF84579.1;Note=identified by match to protein family HMM PF03235;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84579.1;transl_table=11 CP001843.1 Genbank gene 2440214 2441764 . + . ID=gene2225;Name=TREPR_1813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1813 CP001843.1 Genbank CDS 2440214 2441764 . + 0 ID=cds2120;Parent=gene2225;Dbxref=NCBI_GP:AEF86049.1;Name=AEF86049.1;Note=identified by match to protein family HMM PF03781;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86049.1;transl_table=11 CP001843.1 Genbank gene 2441761 2442384 . + . ID=gene2226;Name=TREPR_1812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1812 CP001843.1 Genbank CDS 2441761 2442384 . + 0 ID=cds2121;Parent=gene2226;Dbxref=NCBI_GP:AEF83709.1;Name=AEF83709.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83709.1;transl_table=11 CP001843.1 Genbank gene 2442437 2442772 . - . ID=gene2227;Name=TREPR_1811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1811 CP001843.1 Genbank CDS 2442437 2442772 . - 0 ID=cds2122;Parent=gene2227;Dbxref=NCBI_GP:AEF86326.1;Name=AEF86326.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86326.1;transl_table=11 CP001843.1 Genbank gene 2442772 2443077 . - . ID=gene2228;Name=TREPR_1810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1810 CP001843.1 Genbank CDS 2442772 2443077 . - 0 ID=cds2123;Parent=gene2228;Dbxref=NCBI_GP:AEF84237.1;Name=AEF84237.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=AEF84237.1;transl_table=11 CP001843.1 Genbank gene 2443206 2444285 . + . ID=gene2229;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=TREPR_1809 CP001843.1 Genbank CDS 2443206 2444285 . + 0 ID=cds2124;Parent=gene2229;Dbxref=NCBI_GP:AEF84720.1;Name=AEF84720.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00635;gbkey=CDS;gene=ruvB;product=holliday junction DNA helicase RuvB;protein_id=AEF84720.1;transl_table=11 CP001843.1 Genbank gene 2444260 2445282 . + . ID=gene2230;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=TREPR_1808 CP001843.1 Genbank CDS 2444260 2445282 . + 0 ID=cds2125;Parent=gene2230;Dbxref=NCBI_GP:AEF85725.1;Name=AEF85725.1;Note=identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=AEF85725.1;transl_table=11 CP001843.1 Genbank gene 2445343 2445558 . + . ID=gene2231;Name=TREPR_1807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1807 CP001843.1 Genbank CDS 2445343 2445558 . + 0 ID=cds2126;Parent=gene2231;Dbxref=NCBI_GP:AEF84011.1;Name=AEF84011.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84011.1;transl_table=11 CP001843.1 Genbank pseudogene 2445551 2447377 . + . ID=gene2232;Name=TREPR_1806;Note=neopullulanase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00128%3B match to protein family HMM PF02903;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1806;pseudo=true CP001843.1 Genbank gene 2447403 2448650 . + . ID=gene2233;Name=TREPR_1805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1805 CP001843.1 Genbank CDS 2447403 2448650 . + 0 ID=cds2127;Parent=gene2233;Dbxref=NCBI_GP:AEF85951.1;Name=AEF85951.1;Note=identified by match to protein family HMM PF05161;gbkey=CDS;product=putative hydroxypyruvate reductase;protein_id=AEF85951.1;transl_table=11 CP001843.1 Genbank gene 2448943 2449016 . - . ID=gene2234;Name=TREPR_3919;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3919 CP001843.1 Genbank tRNA 2448943 2449016 . - . ID=rna42;Parent=gene2234;gbkey=tRNA;product=tRNA-Pro CP001843.1 Genbank exon 2448943 2449016 . - . ID=id48;Parent=rna42;gbkey=tRNA;product=tRNA-Pro CP001843.1 Genbank gene 2449080 2450915 . - . ID=gene2235;Name=TREPR_1803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1803 CP001843.1 Genbank CDS 2449080 2450915 . - 0 ID=cds2128;Parent=gene2235;Dbxref=NCBI_GP:AEF86931.1;Name=AEF86931.1;Note=identified by match to protein family HMM PF00128;gbkey=CDS;product=putative sucrose phosphorylase (Sucroseglucosyltransferase);protein_id=AEF86931.1;transl_table=11 CP001843.1 Genbank gene 2450915 2451313 . - . ID=gene2236;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=TREPR_1802 CP001843.1 Genbank CDS 2450915 2451313 . - 0 ID=cds2129;Parent=gene2236;Dbxref=NCBI_GP:AEF83560.1;Name=AEF83560.1;Note=identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR01354;gbkey=CDS;gene=cdd;product=cytidine deaminase;protein_id=AEF83560.1;transl_table=11 CP001843.1 Genbank gene 2451403 2453517 . + . ID=gene2237;Name=TREPR_1801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1801 CP001843.1 Genbank CDS 2451403 2453517 . + 0 ID=cds2130;Parent=gene2237;Dbxref=NCBI_GP:AEF84745.1;Name=AEF84745.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84745.1;transl_table=11 CP001843.1 Genbank gene 2453645 2455387 . - . ID=gene2238;Name=TREPR_1800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1800 CP001843.1 Genbank CDS 2453645 2455387 . - 0 ID=cds2131;Parent=gene2238;Dbxref=NCBI_GP:AEF84773.1;Name=AEF84773.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=acyl-coenzyme A synthetase ACSM3;protein_id=AEF84773.1;transl_table=11 CP001843.1 Genbank gene 2455415 2455969 . - . ID=gene2239;Name=TREPR_1799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1799 CP001843.1 Genbank CDS 2455415 2455969 . - 0 ID=cds2132;Parent=gene2239;Dbxref=NCBI_GP:AEF83826.1;Name=AEF83826.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883;gbkey=CDS;product=transcriptional regulator%2C XRE family with cupin sensor;protein_id=AEF83826.1;transl_table=11 CP001843.1 Genbank gene 2455981 2457501 . - . ID=gene2240;Name=TREPR_1798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1798 CP001843.1 Genbank CDS 2455981 2457501 . - 0 ID=cds2133;Parent=gene2240;Dbxref=NCBI_GP:AEF86535.1;Name=AEF86535.1;Note=identified by match to protein family HMM PF01487%3B match to protein family HMM PF01488%3B match to protein family HMM PF08501;gbkey=CDS;product=putative 3-dehydroquinate dehydratase%2C type 1/shikimate 5-dehydrogenase;protein_id=AEF86535.1;transl_table=11 CP001843.1 Genbank gene 2457538 2458053 . - . ID=gene2241;Name=TREPR_1797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1797 CP001843.1 Genbank CDS 2457538 2458053 . - 0 ID=cds2134;Parent=gene2241;Dbxref=NCBI_GP:AEF85302.1;Name=AEF85302.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85302.1;transl_table=11 CP001843.1 Genbank gene 2458050 2459168 . - . ID=gene2242;Name=TREPR_1796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1796 CP001843.1 Genbank CDS 2458050 2459168 . - 0 ID=cds2135;Parent=gene2242;Dbxref=NCBI_GP:AEF84499.1;Name=AEF84499.1;Note=identified by match to protein family HMM PF02388;gbkey=CDS;product=pentaglycine interpeptide bridge formation protein;protein_id=AEF84499.1;transl_table=11 CP001843.1 Genbank gene 2459168 2461651 . - . ID=gene2243;Name=TREPR_1795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1795 CP001843.1 Genbank CDS 2459168 2461651 . - 0 ID=cds2136;Parent=gene2243;Dbxref=NCBI_GP:AEF84202.1;Name=AEF84202.1;Note=identified by match to protein family HMM PF01588%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00398;gbkey=CDS;product=methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS);protein_id=AEF84202.1;transl_table=11 CP001843.1 Genbank gene 2461769 2463067 . + . ID=gene2244;Name=TREPR_1794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1794 CP001843.1 Genbank CDS 2461769 2463067 . + 0 ID=cds2137;Parent=gene2244;Dbxref=NCBI_GP:AEF86735.1;Name=AEF86735.1;gbkey=CDS;product=ATPase;protein_id=AEF86735.1;transl_table=11 CP001843.1 Genbank gene 2463247 2464617 . - . ID=gene2245;Name=TREPR_1793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1793 CP001843.1 Genbank CDS 2463247 2464617 . - 0 ID=cds2138;Parent=gene2245;Dbxref=NCBI_GP:AEF85799.1;Name=AEF85799.1;gbkey=CDS;product=putative alpha-fucosidase;protein_id=AEF85799.1;transl_table=11 CP001843.1 Genbank gene 2464869 2465198 . + . ID=gene2246;Name=TREPR_1790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1790 CP001843.1 Genbank CDS 2464869 2465198 . + 0 ID=cds2139;Parent=gene2246;Dbxref=NCBI_GP:AEF85109.1;Name=AEF85109.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=DNA-binding protein;protein_id=AEF85109.1;transl_table=11 CP001843.1 Genbank gene 2465206 2465916 . - . ID=gene2247;Name=TREPR_1789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1789 CP001843.1 Genbank CDS 2465206 2465916 . - 0 ID=cds2140;Parent=gene2247;Dbxref=NCBI_GP:AEF84319.1;Name=AEF84319.1;Note=identified by match to protein family HMM PF00849;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=AEF84319.1;transl_table=11 CP001843.1 Genbank gene 2465968 2467137 . + . ID=gene2248;Name=TREPR_1788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1788 CP001843.1 Genbank CDS 2465968 2467137 . + 0 ID=cds2141;Parent=gene2248;Dbxref=NCBI_GP:AEF86232.1;Name=AEF86232.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86232.1;transl_table=11 CP001843.1 Genbank gene 2467215 2468195 . + . ID=gene2249;Name=TREPR_1787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1787 CP001843.1 Genbank CDS 2467215 2468195 . + 0 ID=cds2142;Parent=gene2249;Dbxref=NCBI_GP:AEF85500.1;Name=AEF85500.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppD;protein_id=AEF85500.1;transl_table=11 CP001843.1 Genbank gene 2468192 2469154 . + . ID=gene2250;Name=TREPR_1786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1786 CP001843.1 Genbank CDS 2468192 2469154 . + 0 ID=cds2143;Parent=gene2250;Dbxref=NCBI_GP:AEF84642.1;Name=AEF84642.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF84642.1;transl_table=11 CP001843.1 Genbank gene 2469177 2470133 . + . ID=gene2251;Name=TREPR_1785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1785 CP001843.1 Genbank CDS 2469177 2470133 . + 0 ID=cds2144;Parent=gene2251;Dbxref=NCBI_GP:AEF83901.1;Name=AEF83901.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein AppB;protein_id=AEF83901.1;transl_table=11 CP001843.1 Genbank gene 2470145 2471083 . + . ID=gene2252;Name=TREPR_1784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1784 CP001843.1 Genbank CDS 2470145 2471083 . + 0 ID=cds2145;Parent=gene2252;Dbxref=NCBI_GP:AEF83953.1;Name=AEF83953.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein AppC;protein_id=AEF83953.1;transl_table=11 CP001843.1 Genbank gene 2471108 2472241 . + . ID=gene2253;Name=TREPR_1783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1783 CP001843.1 Genbank CDS 2471108 2472241 . + 0 ID=cds2146;Parent=gene2253;Dbxref=NCBI_GP:AEF86716.1;Name=AEF86716.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321;gbkey=CDS;product=Xaa-Pro dipeptidase;protein_id=AEF86716.1;transl_table=11 CP001843.1 Genbank gene 2472280 2473893 . + . ID=gene2254;Name=TREPR_1782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1782 CP001843.1 Genbank CDS 2472280 2473893 . + 0 ID=cds2147;Parent=gene2254;Dbxref=NCBI_GP:AEF85560.1;Name=AEF85560.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969;gbkey=CDS;product=putative D-aminoacylase;protein_id=AEF85560.1;transl_table=11 CP001843.1 Genbank gene 2473924 2475138 . + . ID=gene2255;Name=TREPR_1781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1781 CP001843.1 Genbank CDS 2473924 2475138 . + 0 ID=cds2148;Parent=gene2255;Dbxref=NCBI_GP:AEF84980.1;Name=AEF84980.1;Note=identified by match to protein family HMM PF01244;gbkey=CDS;product=putative dipeptidase;protein_id=AEF84980.1;transl_table=11 CP001843.1 Genbank gene 2475192 2476832 . + . ID=gene2256;Name=TREPR_1780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1780 CP001843.1 Genbank CDS 2475192 2476832 . + 0 ID=cds2149;Parent=gene2256;Dbxref=NCBI_GP:AEF86883.1;Name=AEF86883.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=bacterial extracellular solute-binding protein%2C family 5;protein_id=AEF86883.1;transl_table=11 CP001843.1 Genbank gene 2476988 2477641 . - . ID=gene2257;Name=TREPR_1779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1779 CP001843.1 Genbank CDS 2476988 2477641 . - 0 ID=cds2150;Parent=gene2257;Dbxref=NCBI_GP:AEF83984.1;Name=AEF83984.1;Note=identified by match to protein family HMM PF00359%3B match to protein family HMM PF00376%3B match to protein family HMM PF05930%3B match to protein family HMM TIGR01764;gbkey=CDS;product=DNA-binding protein/PTS system%2C IIA component;protein_id=AEF83984.1;transl_table=11 CP001843.1 Genbank gene 2478206 2478655 . - . ID=gene2258;Name=TREPR_1778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1778 CP001843.1 Genbank CDS 2478206 2478655 . - 0 ID=cds2151;Parent=gene2258;Dbxref=NCBI_GP:AEF84340.1;Name=AEF84340.1;Note=identified by match to protein family HMM PF01814%3B match to protein family HMM TIGR02481;gbkey=CDS;product=hemerythrin family protein;protein_id=AEF84340.1;transl_table=11 CP001843.1 Genbank pseudogene 2478890 2480008 . + . ID=gene2259;Name=carA;Note=carbamoyl-phosphate synthase%2C small subunit%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368;gbkey=Gene;gene=carA;gene_biotype=pseudogene;locus_tag=TREPR_1776;pseudo=true CP001843.1 Genbank gene 2480005 2483274 . + . ID=gene2260;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=TREPR_1775 CP001843.1 Genbank CDS 2480005 2483274 . + 0 ID=cds2152;Parent=gene2260;Dbxref=NCBI_GP:AEF86241.1;Name=AEF86241.1;Note=identified by match to protein family HMM PF00289%3B match to protein family HMM PF02142%3B match to protein family HMM PF02222%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM TIGR01369;gbkey=CDS;gene=carB;product=carbamoyl-phosphate synthase%2C large subunit;protein_id=AEF86241.1;transl_table=11 CP001843.1 Genbank gene 2484189 2486504 . - . ID=gene2261;Name=TREPR_1773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1773 CP001843.1 Genbank CDS 2484189 2486504 . - 0 ID=cds2153;Parent=gene2261;Dbxref=NCBI_GP:AEF83675.1;Name=AEF83675.1;Note=identified by match to protein family HMM PF00330;gbkey=CDS;product=aconitase family protein;protein_id=AEF83675.1;transl_table=11 CP001843.1 Genbank gene 2486593 2487852 . - . ID=gene2262;Name=TREPR_1772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1772 CP001843.1 Genbank CDS 2486593 2487852 . - 0 ID=cds2154;Parent=gene2262;Dbxref=NCBI_GP:AEF85773.1;Name=AEF85773.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=putative lipoprotein releasing system%2C permease protein;protein_id=AEF85773.1;transl_table=11 CP001843.1 Genbank gene 2487849 2488592 . - . ID=gene2263;Name=TREPR_1771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1771 CP001843.1 Genbank CDS 2487849 2488592 . - 0 ID=cds2155;Parent=gene2263;Dbxref=NCBI_GP:AEF85628.1;Name=AEF85628.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=AEF85628.1;transl_table=11 CP001843.1 Genbank gene 2488585 2489934 . - . ID=gene2264;Name=TREPR_1770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1770 CP001843.1 Genbank CDS 2488585 2489934 . - 0 ID=cds2156;Parent=gene2264;Dbxref=NCBI_GP:AEF85414.1;Name=AEF85414.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=putative lipoprotein releasing system%2C permease protein;protein_id=AEF85414.1;transl_table=11 CP001843.1 Genbank gene 2489934 2491400 . - . ID=gene2265;Name=TREPR_1769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1769 CP001843.1 Genbank CDS 2489934 2491400 . - 0 ID=cds2157;Parent=gene2265;Dbxref=NCBI_GP:AEF83615.1;Name=AEF83615.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83615.1;transl_table=11 CP001843.1 Genbank gene 2491393 2492274 . - . ID=gene2266;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=TREPR_1768 CP001843.1 Genbank CDS 2491393 2492274 . - 0 ID=cds2158;Parent=gene2266;Dbxref=NCBI_GP:AEF84366.1;Name=AEF84366.1;Note=identified by match to protein family HMM PF00448%3B match to protein family HMM TIGR00064;gbkey=CDS;gene=ftsY;product=signal recognition particle-docking protein FtsY;protein_id=AEF84366.1;transl_table=11 CP001843.1 Genbank gene 2492286 2493794 . - . ID=gene2267;Name=TREPR_1767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1767 CP001843.1 Genbank CDS 2492286 2493794 . - 0 ID=cds2159;Parent=gene2267;Dbxref=NCBI_GP:AEF86869.1;Name=AEF86869.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86869.1;transl_table=11 CP001843.1 Genbank gene 2493781 2494725 . - . ID=gene2268;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=TREPR_1766 CP001843.1 Genbank CDS 2493781 2494725 . - 0 ID=cds2160;Parent=gene2268;Dbxref=NCBI_GP:AEF85902.1;Name=AEF85902.1;Note=identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020;gbkey=CDS;gene=prfB;product=peptide chain release factor 2;protein_id=AEF85902.1;transl_table=11 CP001843.1 Genbank gene 2494985 2495857 . - . ID=gene2269;Name=TREPR_1765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1765 CP001843.1 Genbank CDS 2494985 2495857 . - 0 ID=cds2161;Parent=gene2269;Dbxref=NCBI_GP:AEF84060.1;Name=AEF84060.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84060.1;transl_table=11 CP001843.1 Genbank gene 2495892 2496956 . - . ID=gene2270;Name=TREPR_1764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1764 CP001843.1 Genbank CDS 2495892 2496956 . - 0 ID=cds2162;Parent=gene2270;Dbxref=NCBI_GP:AEF85077.1;Name=AEF85077.1;Note=identified by match to protein family HMM PF03739%3B overlaps another CDS with the same product name;gbkey=CDS;product=putative permease%2C YjgP/YjgQ family;protein_id=AEF85077.1;transl_table=11 CP001843.1 Genbank gene 2496953 2498236 . - . ID=gene2271;Name=TREPR_1763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1763 CP001843.1 Genbank CDS 2496953 2498236 . - 0 ID=cds2163;Parent=gene2271;Dbxref=NCBI_GP:AEF86073.1;Name=AEF86073.1;Note=identified by match to protein family HMM PF03739%3B overlaps another CDS with the same product name;gbkey=CDS;product=putative permease%2C YjgP/YjgQ family;protein_id=AEF86073.1;transl_table=11 CP001843.1 Genbank gene 2498238 2498687 . - . ID=gene2272;Name=TREPR_1762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1762 CP001843.1 Genbank CDS 2498238 2498687 . - 0 ID=cds2164;Parent=gene2272;Dbxref=NCBI_GP:AEF83546.1;Name=AEF83546.1;Note=identified by match to protein family HMM PF00692%3B match to protein family HMM TIGR00576;gbkey=CDS;product=dUTP diphosphatase;protein_id=AEF83546.1;transl_table=11 CP001843.1 Genbank gene 2498709 2500898 . - . ID=gene2273;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=TREPR_1761 CP001843.1 Genbank CDS 2498709 2500898 . - 0 ID=cds2165;Parent=gene2273;Dbxref=NCBI_GP:AEF83592.1;Name=AEF83592.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726%3B match to protein family HMM TIGR03591;gbkey=CDS;gene=pnp;product=polyribonucleotide nucleotidyltransferase;protein_id=AEF83592.1;transl_table=11 CP001843.1 Genbank gene 2501047 2501316 . - . ID=gene2274;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=TREPR_1760 CP001843.1 Genbank CDS 2501047 2501316 . - 0 ID=cds2166;Parent=gene2274;Dbxref=NCBI_GP:AEF83547.1;Name=AEF83547.1;Note=identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952;gbkey=CDS;gene=rpsO;product=ribosomal protein S15;protein_id=AEF83547.1;transl_table=11 CP001843.1 Genbank gene 2501341 2502129 . - . ID=gene2275;Name=TREPR_1759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1759 CP001843.1 Genbank CDS 2501341 2502129 . - 0 ID=cds2167;Parent=gene2275;Dbxref=NCBI_GP:AEF83526.1;Name=AEF83526.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM PF06574;gbkey=CDS;product=putative riboflavin biosynthesis protein RibF;protein_id=AEF83526.1;transl_table=11 CP001843.1 Genbank gene 2502116 2503087 . - . ID=gene2276;Name=TREPR_1758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1758 CP001843.1 Genbank CDS 2502116 2503087 . - 0 ID=cds2168;Parent=gene2276;Dbxref=NCBI_GP:AEF84500.1;Name=AEF84500.1;Note=identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431;gbkey=CDS;product=tRNA pseudouridine synthase B;protein_id=AEF84500.1;transl_table=11 CP001843.1 Genbank gene 2503062 2503436 . - . ID=gene2277;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=TREPR_1757 CP001843.1 Genbank CDS 2503062 2503436 . - 0 ID=cds2169;Parent=gene2277;Dbxref=NCBI_GP:AEF85948.1;Name=AEF85948.1;Note=identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=AEF85948.1;transl_table=11 CP001843.1 Genbank gene 2503442 2506342 . - . ID=gene2278;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=TREPR_1756 CP001843.1 Genbank CDS 2503442 2506342 . - 0 ID=cds2170;Parent=gene2278;Dbxref=NCBI_GP:AEF86725.1;Name=AEF86725.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=AEF86725.1;transl_table=11 CP001843.1 Genbank gene 2506323 2507870 . - . ID=gene2279;Name=TREPR_1755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1755 CP001843.1 Genbank CDS 2506323 2507870 . - 0 ID=cds2171;Parent=gene2279;Dbxref=NCBI_GP:AEF83980.1;Name=AEF83980.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF08529%3B match to protein family HMM TIGR01953;gbkey=CDS;product=transcription termination factor NusA;protein_id=AEF83980.1;transl_table=11 CP001843.1 Genbank gene 2507875 2508384 . - . ID=gene2280;Name=TREPR_1754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1754 CP001843.1 Genbank CDS 2507875 2508384 . - 0 ID=cds2172;Parent=gene2280;Dbxref=NCBI_GP:AEF85626.1;Name=AEF85626.1;Note=identified by match to protein family HMM PF02576;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85626.1;transl_table=11 CP001843.1 Genbank gene 2508615 2509103 . - . ID=gene2281;Name=TREPR_1753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1753 CP001843.1 Genbank CDS 2508615 2509103 . - 0 ID=cds2173;Parent=gene2281;Dbxref=NCBI_GP:AEF86429.1;Name=AEF86429.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86429.1;transl_table=11 CP001843.1 Genbank pseudogene 2509091 2509591 . - . ID=gene2282;Name=TREPR_1752;Note=hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1752;pseudo=true CP001843.1 Genbank gene 2509785 2511677 . - . ID=gene2283;Name=TREPR_1751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1751 CP001843.1 Genbank CDS 2509785 2511677 . - 0 ID=cds2174;Parent=gene2283;Dbxref=NCBI_GP:AEF86734.1;Name=AEF86734.1;Note=identified by match to protein family HMM PF03065;gbkey=CDS;product=alpha-amylase;protein_id=AEF86734.1;transl_table=11 CP001843.1 Genbank gene 2511792 2512421 . - . ID=gene2284;Name=TREPR_1750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1750 CP001843.1 Genbank CDS 2511792 2512421 . - 0 ID=cds2175;Parent=gene2284;Dbxref=NCBI_GP:AEF83538.1;Name=AEF83538.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83538.1;transl_table=11 CP001843.1 Genbank gene 2512418 2513044 . - . ID=gene2285;Name=TREPR_1749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1749 CP001843.1 Genbank CDS 2512418 2513044 . - 0 ID=cds2176;Parent=gene2285;Dbxref=NCBI_GP:AEF84509.1;Name=AEF84509.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF84509.1;transl_table=11 CP001843.1 Genbank gene 2513034 2513534 . - . ID=gene2286;Name=TREPR_1748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1748 CP001843.1 Genbank CDS 2513034 2513534 . - 0 ID=cds2177;Parent=gene2286;Dbxref=NCBI_GP:AEF85613.1;Name=AEF85613.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85613.1;transl_table=11 CP001843.1 Genbank gene 2513531 2514682 . - . ID=gene2287;Name=TREPR_1747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1747 CP001843.1 Genbank CDS 2513531 2514682 . - 0 ID=cds2178;Parent=gene2287;Dbxref=NCBI_GP:AEF86502.1;Name=AEF86502.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF86502.1;transl_table=11 CP001843.1 Genbank gene 2514682 2516178 . - . ID=gene2288;Name=TREPR_1746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1746 CP001843.1 Genbank CDS 2514682 2516178 . - 0 ID=cds2179;Parent=gene2288;Dbxref=NCBI_GP:AEF86806.1;Name=AEF86806.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=putative 4Fe-4S ferredoxin%2C RnfC;protein_id=AEF86806.1;transl_table=11 CP001843.1 Genbank gene 2516175 2517644 . - . ID=gene2289;Name=TREPR_1745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1745 CP001843.1 Genbank CDS 2516175 2517644 . - 0 ID=cds2180;Parent=gene2289;Dbxref=NCBI_GP:AEF83850.1;Name=AEF83850.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF83850.1;transl_table=11 CP001843.1 Genbank gene 2517777 2518265 . - . ID=gene2290;Name=TREPR_1744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1744 CP001843.1 Genbank CDS 2517777 2518265 . - 0 ID=cds2181;Parent=gene2290;Dbxref=NCBI_GP:AEF85197.1;Name=AEF85197.1;Note=identified by match to protein family HMM PF02681;gbkey=CDS;product=integral membrane protein;protein_id=AEF85197.1;transl_table=11 CP001843.1 Genbank gene 2518499 2519656 . + . ID=gene2291;Name=TREPR_1743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1743 CP001843.1 Genbank CDS 2518499 2519656 . + 0 ID=cds2182;Parent=gene2291;Dbxref=NCBI_GP:AEF86004.1;Name=AEF86004.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=AEF86004.1;transl_table=11 CP001843.1 Genbank gene 2519682 2521652 . + . ID=gene2292;Name=TREPR_1742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1742 CP001843.1 Genbank CDS 2519682 2521652 . + 0 ID=cds2183;Parent=gene2292;Dbxref=NCBI_GP:AEF84081.1;Name=AEF84081.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=AEF84081.1;transl_table=11 CP001843.1 Genbank gene 2521774 2522874 . + . ID=gene2293;Name=TREPR_1741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1741 CP001843.1 Genbank CDS 2521774 2522874 . + 0 ID=cds2184;Parent=gene2293;Dbxref=NCBI_GP:AEF86994.1;Name=AEF86994.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321;gbkey=CDS;product=Xaa-Pro dipeptidase (X-Pro dipeptidase) (Prolinedipeptidase) (Prolidase) (Imidodipeptidase);protein_id=AEF86994.1;transl_table=11 CP001843.1 Genbank gene 2522962 2523825 . + . ID=gene2294;Name=TREPR_1740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1740 CP001843.1 Genbank CDS 2522962 2523825 . + 0 ID=cds2185;Parent=gene2294;Dbxref=NCBI_GP:AEF86010.1;Name=AEF86010.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86010.1;transl_table=11 CP001843.1 Genbank gene 2523842 2525602 . + . ID=gene2295;Name=TREPR_1739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1739 CP001843.1 Genbank CDS 2523842 2525602 . + 0 ID=cds2186;Parent=gene2295;Dbxref=NCBI_GP:AEF84501.1;Name=AEF84501.1;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF84501.1;transl_table=11 CP001843.1 Genbank gene 2525717 2525851 . + . ID=gene2296;Name=TREPR_1738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1738 CP001843.1 Genbank CDS 2525717 2525851 . + 0 ID=cds2187;Parent=gene2296;Dbxref=NCBI_GP:AEF83537.1;Name=AEF83537.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83537.1;transl_table=11 CP001843.1 Genbank gene 2525932 2527155 . - . ID=gene2297;Name=TREPR_1737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1737 CP001843.1 Genbank CDS 2525932 2527155 . - 0 ID=cds2188;Parent=gene2297;Dbxref=NCBI_GP:AEF84014.1;Name=AEF84014.1;Note=identified by match to protein family HMM PF01743%3B match to protein family HMM TIGR01942;gbkey=CDS;product=polyA polymerase family protein;protein_id=AEF84014.1;transl_table=11 CP001843.1 Genbank gene 2527169 2528134 . - . ID=gene2298;Name=TREPR_1736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1736 CP001843.1 Genbank CDS 2527169 2528134 . - 0 ID=cds2189;Parent=gene2298;Dbxref=NCBI_GP:AEF85673.1;Name=AEF85673.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=alpha/beta hydrolase family protein;protein_id=AEF85673.1;transl_table=11 CP001843.1 Genbank gene 2528199 2529446 . + . ID=gene2299;Name=TREPR_1735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1735 CP001843.1 Genbank CDS 2528199 2529446 . + 0 ID=cds2190;Parent=gene2299;Dbxref=NCBI_GP:AEF85954.1;Name=AEF85954.1;Note=identified by match to protein family HMM PF05958;gbkey=CDS;product=23S rRNA (uracil-5-)-methyltransferase RumA;protein_id=AEF85954.1;transl_table=11 CP001843.1 Genbank gene 2529443 2530813 . + . ID=gene2300;Name=TREPR_1734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1734 CP001843.1 Genbank CDS 2529443 2530813 . + 0 ID=cds2191;Parent=gene2300;Dbxref=NCBI_GP:AEF84956.1;Name=AEF84956.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84956.1;transl_table=11 CP001843.1 Genbank gene 2530887 2531399 . + . ID=gene2301;Name=TREPR_1733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1733 CP001843.1 Genbank CDS 2530887 2531399 . + 0 ID=cds2192;Parent=gene2301;Dbxref=NCBI_GP:AEF83711.1;Name=AEF83711.1;Note=identified by match to protein family HMM PF05163;gbkey=CDS;product=DinB family;protein_id=AEF83711.1;transl_table=11 CP001843.1 Genbank gene 2531422 2532510 . - . ID=gene2302;Name=TREPR_1732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1732 CP001843.1 Genbank CDS 2531422 2532510 . - 0 ID=cds2193;Parent=gene2302;Dbxref=NCBI_GP:AEF86758.1;Name=AEF86758.1;Note=identified by match to protein family HMM PF05036%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF86758.1;transl_table=11 CP001843.1 Genbank gene 2532485 2532817 . - . ID=gene2303;Name=TREPR_1731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1731 CP001843.1 Genbank CDS 2532485 2532817 . - 0 ID=cds2194;Parent=gene2303;Dbxref=NCBI_GP:AEF86003.1;Name=AEF86003.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86003.1;transl_table=11 CP001843.1 Genbank gene 2532827 2534170 . - . ID=gene2304;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=TREPR_1730 CP001843.1 Genbank CDS 2532827 2534170 . - 0 ID=cds2195;Parent=gene2304;Dbxref=NCBI_GP:AEF85198.1;Name=AEF85198.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01574;gbkey=CDS;gene=miaB;product=tRNA-I(6)A37 thiotransferase enzyme MiaB;protein_id=AEF85198.1;transl_table=11 CP001843.1 Genbank gene 2534192 2534563 . - . ID=gene2305;Name=TREPR_1729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1729 CP001843.1 Genbank CDS 2534192 2534563 . - 0 ID=cds2196;Parent=gene2305;Dbxref=NCBI_GP:AEF83716.1;Name=AEF83716.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83716.1;transl_table=11 CP001843.1 Genbank gene 2535163 2535693 . + . ID=gene2306;Name=TREPR_1727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1727 CP001843.1 Genbank CDS 2535163 2535693 . + 0 ID=cds2197;Parent=gene2306;Dbxref=NCBI_GP:AEF86414.1;Name=AEF86414.1;Note=identified by match to protein family HMM PF03602;gbkey=CDS;product=methyltransferase small;protein_id=AEF86414.1;transl_table=11 CP001843.1 Genbank gene 2535757 2536104 . + . ID=gene2307;Name=TREPR_1726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1726 CP001843.1 Genbank CDS 2535757 2536104 . + 0 ID=cds2198;Parent=gene2307;Dbxref=NCBI_GP:AEF83684.1;Name=AEF83684.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83684.1;transl_table=11 CP001843.1 Genbank gene 2536097 2537254 . + . ID=gene2308;Name=TREPR_1725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1725 CP001843.1 Genbank CDS 2536097 2537254 . + 0 ID=cds2199;Parent=gene2308;Dbxref=NCBI_GP:AEF85268.1;Name=AEF85268.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF85268.1;transl_table=11 CP001843.1 Genbank gene 2537254 2538339 . + . ID=gene2309;Name=TREPR_1723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1723 CP001843.1 Genbank CDS 2537254 2538339 . + 0 ID=cds2200;Parent=gene2309;Dbxref=NCBI_GP:AEF86767.1;Name=AEF86767.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048;gbkey=CDS;product=radical SAM enzyme%2C Cfr family;protein_id=AEF86767.1;transl_table=11 CP001843.1 Genbank gene 2538305 2538421 . - . ID=gene2310;Name=TREPR_1724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1724 CP001843.1 Genbank CDS 2538305 2538421 . - 0 ID=cds2201;Parent=gene2310;Dbxref=NCBI_GP:AEF86026.1;Name=AEF86026.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86026.1;transl_table=11 CP001843.1 Genbank gene 2538471 2539571 . + . ID=gene2311;Name=TREPR_1722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1722 CP001843.1 Genbank CDS 2538471 2539571 . + 0 ID=cds2202;Parent=gene2311;Dbxref=NCBI_GP:AEF86315.1;Name=AEF86315.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251;gbkey=CDS;product=putative ribose-Phosphate pyrophosphokinase (rppk) (phosphoribosylpyrophosphate synthetase) (p-rib-pp synthetase) (prpp synthetase);protein_id=AEF86315.1;transl_table=11 CP001843.1 Genbank gene 2539582 2540712 . - . ID=gene2312;Name=TREPR_1721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1721 CP001843.1 Genbank CDS 2539582 2540712 . - 0 ID=cds2203;Parent=gene2312;Dbxref=NCBI_GP:AEF83580.1;Name=AEF83580.1;Note=identified by match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF83580.1;transl_table=11 CP001843.1 Genbank pseudogene 2540718 2541740 . - . ID=gene2313;Name=TREPR_1720;Note=tetratricopeptide repeat domain protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1720;pseudo=true CP001843.1 Genbank gene 2541826 2542575 . - . ID=gene2314;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=TREPR_1719 CP001843.1 Genbank CDS 2541826 2542575 . - 0 ID=cds2204;Parent=gene2314;Dbxref=NCBI_GP:AEF85107.1;Name=AEF85107.1;Note=identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163;gbkey=CDS;gene=rpe;product=ribulose-phosphate 3-epimerase;protein_id=AEF85107.1;transl_table=11 CP001843.1 Genbank gene 2542558 2543544 . + . ID=gene2315;Name=TREPR_1718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1718 CP001843.1 Genbank CDS 2542558 2543544 . + 0 ID=cds2205;Parent=gene2315;Dbxref=NCBI_GP:AEF85847.1;Name=AEF85847.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF85847.1;transl_table=11 CP001843.1 Genbank gene 2543578 2546271 . + . ID=gene2316;Name=TREPR_1717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1717 CP001843.1 Genbank CDS 2543578 2546271 . + 0 ID=cds2206;Parent=gene2316;Dbxref=NCBI_GP:AEF85085.1;Name=AEF85085.1;Note=identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462;gbkey=CDS;product=transcription elongation factor;protein_id=AEF85085.1;transl_table=11 CP001843.1 Genbank gene 2546302 2547939 . - . ID=gene2317;Name=TREPR_1716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1716 CP001843.1 Genbank CDS 2546302 2547939 . - 0 ID=cds2207;Parent=gene2317;Dbxref=NCBI_GP:AEF85882.1;Name=AEF85882.1;Note=identified by match to protein family HMM PF03130;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85882.1;transl_table=11 CP001843.1 Genbank gene 2547936 2549078 . - . ID=gene2318;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=TREPR_1715 CP001843.1 Genbank CDS 2547936 2549078 . - 0 ID=cds2208;Parent=gene2318;Dbxref=NCBI_GP:AEF86668.1;Name=AEF86668.1;Note=identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449;gbkey=CDS;gene=tgt;product=tRNA-guanine transglycosylase;protein_id=AEF86668.1;transl_table=11 CP001843.1 Genbank gene 2549303 2549923 . + . ID=gene2319;Name=TREPR_1714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1714 CP001843.1 Genbank CDS 2549303 2549923 . + 0 ID=cds2209;Parent=gene2319;Dbxref=NCBI_GP:AEF83899.1;Name=AEF83899.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=putative transcriptional regulator%2C TetR family;protein_id=AEF83899.1;transl_table=11 CP001843.1 Genbank gene 2549953 2550090 . + . ID=gene2320;Name=TREPR_1713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1713 CP001843.1 Genbank CDS 2549953 2550090 . + 0 ID=cds2210;Parent=gene2320;Dbxref=NCBI_GP:AEF84679.1;Name=AEF84679.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84679.1;transl_table=11 CP001843.1 Genbank gene 2550246 2551961 . + . ID=gene2321;Name=TREPR_1712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1712 CP001843.1 Genbank CDS 2550246 2551961 . + 0 ID=cds2211;Parent=gene2321;Dbxref=NCBI_GP:AEF85531.1;Name=AEF85531.1;gbkey=CDS;product=protein tyrosine/serine phosphatase;protein_id=AEF85531.1;transl_table=11 CP001843.1 Genbank gene 2551986 2552780 . + . ID=gene2322;Name=TREPR_1711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1711 CP001843.1 Genbank CDS 2551986 2552780 . + 0 ID=cds2212;Parent=gene2322;Dbxref=NCBI_GP:AEF85530.1;Name=AEF85530.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85530.1;transl_table=11 CP001843.1 Genbank gene 2552970 2556059 . - . ID=gene2323;Name=TREPR_1710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1710 CP001843.1 Genbank CDS 2552970 2556059 . - 0 ID=cds2213;Parent=gene2323;Dbxref=NCBI_GP:AEF86297.1;Name=AEF86297.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF02743;gbkey=CDS;product=hybrid sensory kinase;protein_id=AEF86297.1;transl_table=11 CP001843.1 Genbank gene 2556079 2557518 . - . ID=gene2324;Name=TREPR_1709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1709 CP001843.1 Genbank CDS 2556079 2557518 . - 0 ID=cds2214;Parent=gene2324;Dbxref=NCBI_GP:AEF83604.1;Name=AEF83604.1;Note=identified by match to protein family HMM PF00196;gbkey=CDS;product=transcriptional regulator%2C LuxR family protein;protein_id=AEF83604.1;transl_table=11 CP001843.1 Genbank gene 2557522 2558832 . - . ID=gene2325;Name=TREPR_1708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1708 CP001843.1 Genbank CDS 2557522 2558832 . - 0 ID=cds2215;Parent=gene2325;Dbxref=NCBI_GP:AEF86137.1;Name=AEF86137.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative bacterial extracellular solute-binding protein;protein_id=AEF86137.1;transl_table=11 CP001843.1 Genbank gene 2559235 2559414 . + . ID=gene2326;Name=TREPR_1706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1706 CP001843.1 Genbank CDS 2559235 2559414 . + 0 ID=cds2216;Parent=gene2326;Dbxref=NCBI_GP:AEF86908.1;Name=AEF86908.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86908.1;transl_table=11 CP001843.1 Genbank gene 2559411 2561594 . + . ID=gene2327;Name=TREPR_1705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1705 CP001843.1 Genbank CDS 2559411 2561594 . + 0 ID=cds2217;Parent=gene2327;Dbxref=NCBI_GP:AEF83954.1;Name=AEF83954.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=AEF83954.1;transl_table=11 CP001843.1 Genbank gene 2561634 2562731 . + . ID=gene2328;Name=TREPR_1704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1704 CP001843.1 Genbank CDS 2561634 2562731 . + 0 ID=cds2218;Parent=gene2328;Dbxref=NCBI_GP:AEF84726.1;Name=AEF84726.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01966;gbkey=CDS;product=response regulator receiver modulated metal dependent phosphohydrolase;protein_id=AEF84726.1;transl_table=11 CP001843.1 Genbank gene 2562789 2563751 . - . ID=gene2329;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=TREPR_1703 CP001843.1 Genbank CDS 2562789 2563751 . - 0 ID=cds2219;Parent=gene2329;Dbxref=NCBI_GP:AEF86380.1;Name=AEF86380.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01077%3B match to protein family HMM PF03460%3B match to protein family HMM TIGR02912;gbkey=CDS;gene=asrC;product=sulfite reductase%2C subunit C;protein_id=AEF86380.1;transl_table=11 CP001843.1 Genbank gene 2563762 2564556 . - . ID=gene2330;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=TREPR_1702 CP001843.1 Genbank CDS 2563762 2564556 . - 0 ID=cds2220;Parent=gene2330;Dbxref=NCBI_GP:AEF84586.1;Name=AEF84586.1;Note=identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970%3B match to protein family HMM TIGR02911;gbkey=CDS;gene=asrB;product=sulfite reductase%2C subunit B;protein_id=AEF84586.1;transl_table=11 CP001843.1 Genbank gene 2564543 2565571 . - . ID=gene2331;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=TREPR_1701 CP001843.1 Genbank CDS 2564543 2565571 . - 0 ID=cds2221;Parent=gene2331;Dbxref=NCBI_GP:AEF83632.1;Name=AEF83632.1;Note=identified by match to protein family HMM TIGR02910;gbkey=CDS;gene=asrA;product=sulfite reductase%2C subunit A;protein_id=AEF83632.1;transl_table=11 CP001843.1 Genbank gene 2565628 2566314 . - . ID=gene2332;Name=TREPR_1700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1700 CP001843.1 Genbank CDS 2565628 2566314 . - 0 ID=cds2222;Parent=gene2332;Dbxref=NCBI_GP:AEF85339.1;Name=AEF85339.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;product=transcriptional regulator%2C Crp/Fnr family;protein_id=AEF85339.1;transl_table=11 CP001843.1 Genbank gene 2566494 2566727 . - . ID=gene2333;Name=TREPR_1699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1699 CP001843.1 Genbank CDS 2566494 2566727 . - 0 ID=cds2223;Parent=gene2333;Dbxref=NCBI_GP:AEF84795.1;Name=AEF84795.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84795.1;transl_table=11 CP001843.1 Genbank gene 2566720 2566863 . - . ID=gene2334;Name=TREPR_1698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1698 CP001843.1 Genbank CDS 2566720 2566863 . - 0 ID=cds2224;Parent=gene2334;Dbxref=NCBI_GP:AEF83815.1;Name=AEF83815.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83815.1;transl_table=11 CP001843.1 Genbank gene 2566847 2566966 . - . ID=gene2335;Name=TREPR_1697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1697 CP001843.1 Genbank CDS 2566847 2566966 . - 0 ID=cds2225;Parent=gene2335;Dbxref=NCBI_GP:AEF84117.1;Name=AEF84117.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84117.1;transl_table=11 CP001843.1 Genbank gene 2566966 2567775 . - . ID=gene2336;Name=TREPR_1696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1696 CP001843.1 Genbank CDS 2566966 2567775 . - 0 ID=cds2226;Parent=gene2336;Dbxref=NCBI_GP:AEF86013.1;Name=AEF86013.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter%2C ATP-binding protein;protein_id=AEF86013.1;transl_table=11 CP001843.1 Genbank gene 2567772 2568704 . - . ID=gene2337;Name=TREPR_1695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1695 CP001843.1 Genbank CDS 2567772 2568704 . - 0 ID=cds2227;Parent=gene2337;Dbxref=NCBI_GP:AEF83617.1;Name=AEF83617.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF83617.1;transl_table=11 CP001843.1 Genbank gene 2568717 2569712 . - . ID=gene2338;Name=TREPR_1694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1694 CP001843.1 Genbank CDS 2568717 2569712 . - 0 ID=cds2228;Parent=gene2338;Dbxref=NCBI_GP:AEF84591.1;Name=AEF84591.1;Note=identified by match to protein family HMM PF04392;gbkey=CDS;product=ABC transporter%2C substrate-binding protein;protein_id=AEF84591.1;transl_table=11 CP001843.1 Genbank gene 2569738 2569902 . - . ID=gene2339;Name=TREPR_1693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1693 CP001843.1 Genbank CDS 2569738 2569902 . - 0 ID=cds2229;Parent=gene2339;Dbxref=NCBI_GP:AEF85588.1;Name=AEF85588.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85588.1;transl_table=11 CP001843.1 Genbank gene 2569923 2570234 . - . ID=gene2340;Name=TREPR_1692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1692 CP001843.1 Genbank CDS 2569923 2570234 . - 0 ID=cds2230;Parent=gene2340;Dbxref=NCBI_GP:AEF84957.1;Name=AEF84957.1;Note=identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385;gbkey=CDS;product=conserved plasmid protein;protein_id=AEF84957.1;transl_table=11 CP001843.1 Genbank gene 2570224 2570529 . - . ID=gene2341;Name=TREPR_1691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1691 CP001843.1 Genbank CDS 2570224 2570529 . - 0 ID=cds2231;Parent=gene2341;Dbxref=NCBI_GP:AEF83988.1;Name=AEF83988.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;product=plasmid stabilization system antitoxin protein;protein_id=AEF83988.1;transl_table=11 CP001843.1 Genbank gene 2570627 2572654 . - . ID=gene2342;Name=TREPR_1690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1690 CP001843.1 Genbank CDS 2570627 2572654 . - 0 ID=cds2232;Parent=gene2342;Dbxref=NCBI_GP:AEF86990.1;Name=AEF86990.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07721;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=AEF86990.1;transl_table=11 CP001843.1 Genbank gene 2572706 2573506 . - . ID=gene2343;Name=TREPR_1689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1689 CP001843.1 Genbank CDS 2572706 2573506 . - 0 ID=cds2233;Parent=gene2343;Dbxref=NCBI_GP:AEF86030.1;Name=AEF86030.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF03471;gbkey=CDS;product=hemolysin C;protein_id=AEF86030.1;transl_table=11 CP001843.1 Genbank gene 2573507 2573977 . - . ID=gene2344;Name=TREPR_1688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1688 CP001843.1 Genbank CDS 2573507 2573977 . - 0 ID=cds2234;Parent=gene2344;Dbxref=NCBI_GP:AEF84948.1;Name=AEF84948.1;Note=identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84948.1;transl_table=11 CP001843.1 Genbank gene 2573978 2576392 . - . ID=gene2345;Name=TREPR_1687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1687 CP001843.1 Genbank CDS 2573978 2576392 . - 0 ID=cds2235;Parent=gene2345;Dbxref=NCBI_GP:AEF84071.1;Name=AEF84071.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM PF07698%3B match to protein family HMM TIGR00277;gbkey=CDS;product=HD domain protein;protein_id=AEF84071.1;transl_table=11 CP001843.1 Genbank gene 2576367 2577425 . - . ID=gene2346;Name=TREPR_1686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1686 CP001843.1 Genbank CDS 2576367 2577425 . - 0 ID=cds2236;Parent=gene2346;Dbxref=NCBI_GP:AEF86243.1;Name=AEF86243.1;Note=identified by match to protein family HMM PF02562;gbkey=CDS;product=PhoH family protein;protein_id=AEF86243.1;transl_table=11 CP001843.1 Genbank gene 2577954 2579075 . - . ID=gene2347;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=TREPR_1685 CP001843.1 Genbank CDS 2577954 2579075 . - 0 ID=cds2237;Parent=gene2347;Dbxref=NCBI_GP:AEF85689.1;Name=AEF85689.1;Note=identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=AEF85689.1;transl_table=11 CP001843.1 Genbank gene 2579075 2580985 . - . ID=gene2348;Name=TREPR_1684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1684 CP001843.1 Genbank CDS 2579075 2580985 . - 0 ID=cds2238;Parent=gene2348;Dbxref=NCBI_GP:AEF85991.1;Name=AEF85991.1;Note=identified by match to protein family HMM PF04290%3B match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;product=trap dicarboxylate transporter- dctm subunit;protein_id=AEF85991.1;transl_table=11 CP001843.1 Genbank gene 2580991 2581974 . - . ID=gene2349;Name=TREPR_1683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1683 CP001843.1 Genbank CDS 2580991 2581974 . - 0 ID=cds2239;Parent=gene2349;Dbxref=NCBI_GP:AEF83688.1;Name=AEF83688.1;Note=identified by match to protein family HMM PF03480;gbkey=CDS;product=putative trap dicarboxylate transporter- dctp subunit;protein_id=AEF83688.1;transl_table=11 CP001843.1 Genbank gene 2582117 2583049 . - . ID=gene2350;Name=TREPR_1682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1682 CP001843.1 Genbank CDS 2582117 2583049 . - 0 ID=cds2240;Parent=gene2350;Dbxref=NCBI_GP:AEF84414.1;Name=AEF84414.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84414.1;transl_table=11 CP001843.1 Genbank gene 2583058 2584836 . - . ID=gene2351;Name=TREPR_1681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1681 CP001843.1 Genbank CDS 2583058 2584836 . - 0 ID=cds2241;Parent=gene2351;Dbxref=NCBI_GP:AEF85659.1;Name=AEF85659.1;Note=identified by match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880;gbkey=CDS;product=putative phosphomannomutase;protein_id=AEF85659.1;transl_table=11 CP001843.1 Genbank gene 2584932 2585348 . - . ID=gene2352;Name=TREPR_1680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1680 CP001843.1 Genbank CDS 2584932 2585348 . - 0 ID=cds2242;Parent=gene2352;Dbxref=NCBI_GP:AEF84883.1;Name=AEF84883.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84883.1;transl_table=11 CP001843.1 Genbank gene 2585645 2585812 . - . ID=gene2353;Name=TREPR_1679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1679 CP001843.1 Genbank CDS 2585645 2585812 . - 0 ID=cds2243;Parent=gene2353;Dbxref=NCBI_GP:AEF85898.1;Name=AEF85898.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85898.1;transl_table=11 CP001843.1 Genbank gene 2586103 2586363 . + . ID=gene2354;Name=TREPR_1677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1677 CP001843.1 Genbank CDS 2586103 2586363 . + 0 ID=cds2244;Parent=gene2354;Dbxref=NCBI_GP:AEF84737.1;Name=AEF84737.1;Note=identified by match to protein family HMM PF04277%3B match to protein family HMM TIGR01195;gbkey=CDS;product=sodium pump decarboxylase%2C gamma subunit;protein_id=AEF84737.1;transl_table=11 CP001843.1 Genbank gene 2586380 2588437 . + . ID=gene2355;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=TREPR_1676 CP001843.1 Genbank CDS 2586380 2588437 . + 0 ID=cds2245;Parent=gene2355;Dbxref=NCBI_GP:AEF84478.1;Name=AEF84478.1;Note=identified by match to protein family HMM PF00364%3B match to protein family HMM PF00682%3B match to protein family HMM PF02436%3B match to protein family HMM TIGR01108;gbkey=CDS;gene=oadA;product=oxaloacetate decarboxylase alpha subunit;protein_id=AEF84478.1;transl_table=11 CP001843.1 Genbank gene 2588508 2589911 . + . ID=gene2356;Name=TREPR_1675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1675 CP001843.1 Genbank CDS 2588508 2589911 . + 0 ID=cds2246;Parent=gene2356;Dbxref=NCBI_GP:AEF85705.1;Name=AEF85705.1;Note=identified by match to protein family HMM PF03977%3B match to protein family HMM TIGR01109;gbkey=CDS;product=oxaloacetate decarboxylase%2C subunit beta;protein_id=AEF85705.1;transl_table=11 CP001843.1 Genbank gene 2590171 2590293 . - . ID=gene2357;Name=TREPR_1674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1674 CP001843.1 Genbank CDS 2590171 2590293 . - 0 ID=cds2247;Parent=gene2357;Dbxref=NCBI_GP:AEF86876.1;Name=AEF86876.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86876.1;transl_table=11 CP001843.1 Genbank gene 2590408 2591502 . + . ID=gene2358;Name=TREPR_1672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1672 CP001843.1 Genbank CDS 2590408 2591502 . + 0 ID=cds2248;Parent=gene2358;Dbxref=NCBI_GP:AEF84983.1;Name=AEF84983.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=iron(III) dicitrate transport ATP-binding protein FecE;protein_id=AEF84983.1;transl_table=11 CP001843.1 Genbank gene 2591487 2591603 . - . ID=gene2359;Name=TREPR_1673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1673 CP001843.1 Genbank CDS 2591487 2591603 . - 0 ID=cds2249;Parent=gene2359;Dbxref=NCBI_GP:AEF83618.1;Name=AEF83618.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83618.1;transl_table=11 CP001843.1 Genbank gene 2591554 2592558 . + . ID=gene2360;Name=TREPR_1671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1671 CP001843.1 Genbank CDS 2591554 2592558 . + 0 ID=cds2250;Parent=gene2360;Dbxref=NCBI_GP:AEF83782.1;Name=AEF83782.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;product=HmuU protein;protein_id=AEF83782.1;transl_table=11 CP001843.1 Genbank gene 2592555 2593370 . + . ID=gene2361;Name=TREPR_1670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1670 CP001843.1 Genbank CDS 2592555 2593370 . + 0 ID=cds2251;Parent=gene2361;Dbxref=NCBI_GP:AEF86497.1;Name=AEF86497.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=hemin import ATP-binding protein HmuV;protein_id=AEF86497.1;transl_table=11 CP001843.1 Genbank gene 2593392 2594465 . + . ID=gene2362;Name=TREPR_1669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1669 CP001843.1 Genbank CDS 2593392 2594465 . + 0 ID=cds2252;Parent=gene2362;Dbxref=NCBI_GP:AEF85396.1;Name=AEF85396.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=iron(III) dicitrate transport ATP-binding protein FecE;protein_id=AEF85396.1;transl_table=11 CP001843.1 Genbank gene 2594482 2595693 . - . ID=gene2363;Name=TREPR_1668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1668 CP001843.1 Genbank CDS 2594482 2595693 . - 0 ID=cds2253;Parent=gene2363;Dbxref=NCBI_GP:AEF84473.1;Name=AEF84473.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM TIGR00177;gbkey=CDS;product=molybdenum cofactor synthesis domain protein;protein_id=AEF84473.1;transl_table=11 CP001843.1 Genbank gene 2595789 2599031 . - . ID=gene2364;Name=TREPR_1667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1667 CP001843.1 Genbank CDS 2595789 2599031 . - 0 ID=cds2254;Parent=gene2364;Dbxref=NCBI_GP:AEF85108.1;Name=AEF85108.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF85108.1;transl_table=11 CP001843.1 Genbank gene 2599031 2599732 . - . ID=gene2365;Name=TREPR_1666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1666 CP001843.1 Genbank CDS 2599031 2599732 . - 0 ID=cds2255;Parent=gene2365;Dbxref=NCBI_GP:AEF85855.1;Name=AEF85855.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=macrolide export ATP-binding/permease protein MacB;protein_id=AEF85855.1;transl_table=11 CP001843.1 Genbank gene 2599867 2601156 . + . ID=gene2366;Name=TREPR_1665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1665 CP001843.1 Genbank CDS 2599867 2601156 . + 0 ID=cds2256;Parent=gene2366;Dbxref=NCBI_GP:AEF83556.1;Name=AEF83556.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83556.1;transl_table=11 CP001843.1 Genbank gene 2601244 2603319 . + . ID=gene2367;Name=TREPR_1664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1664 CP001843.1 Genbank CDS 2601244 2603319 . + 0 ID=cds2257;Parent=gene2367;Dbxref=NCBI_GP:AEF86494.1;Name=AEF86494.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=AEF86494.1;transl_table=11 CP001843.1 Genbank gene 2603502 2604737 . + . ID=gene2368;Name=TREPR_1663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1663 CP001843.1 Genbank CDS 2603502 2604737 . + 0 ID=cds2258;Parent=gene2368;Dbxref=NCBI_GP:AEF86224.1;Name=AEF86224.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86224.1;transl_table=11 CP001843.1 Genbank gene 2604739 2605119 . + . ID=gene2369;Name=TREPR_1662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1662 CP001843.1 Genbank CDS 2604739 2605119 . + 0 ID=cds2259;Parent=gene2369;Dbxref=NCBI_GP:AEF85462.1;Name=AEF85462.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85462.1;transl_table=11 CP001843.1 Genbank gene 2605839 2606306 . + . ID=gene2370;Name=TREPR_1661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1661 CP001843.1 Genbank CDS 2605839 2606306 . + 0 ID=cds2260;Parent=gene2370;Dbxref=NCBI_GP:AEF84213.1;Name=AEF84213.1;Note=identified by match to protein family HMM PF01584;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84213.1;transl_table=11 CP001843.1 Genbank gene 2606321 2606881 . + . ID=gene2371;Name=TREPR_1660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1660 CP001843.1 Genbank CDS 2606321 2606881 . + 0 ID=cds2261;Parent=gene2371;Dbxref=NCBI_GP:AEF86633.1;Name=AEF86633.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86633.1;transl_table=11 CP001843.1 Genbank gene 2606874 2607884 . + . ID=gene2372;Name=TREPR_1659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1659 CP001843.1 Genbank CDS 2606874 2607884 . + 0 ID=cds2262;Parent=gene2372;Dbxref=NCBI_GP:AEF85901.1;Name=AEF85901.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01339;gbkey=CDS;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=AEF85901.1;transl_table=11 CP001843.1 Genbank gene 2607881 2609521 . + . ID=gene2373;Name=TREPR_1658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1658 CP001843.1 Genbank CDS 2607881 2609521 . + 0 ID=cds2263;Parent=gene2373;Dbxref=NCBI_GP:AEF84657.1;Name=AEF84657.1;Note=identified by match to protein family HMM PF01739;gbkey=CDS;product=putative MCP methyltransferase%2C CheR-type;protein_id=AEF84657.1;transl_table=11 CP001843.1 Genbank gene 2609534 2611612 . + . ID=gene2374;Name=TREPR_1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1657 CP001843.1 Genbank CDS 2609534 2611612 . + 0 ID=cds2264;Parent=gene2374;Dbxref=NCBI_GP:AEF84416.1;Name=AEF84416.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=putative methyl-accepting chemotaxis protein;protein_id=AEF84416.1;transl_table=11 CP001843.1 Genbank gene 2611609 2613174 . + . ID=gene2375;Name=TREPR_1656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1656 CP001843.1 Genbank CDS 2611609 2613174 . + 0 ID=cds2265;Parent=gene2375;Dbxref=NCBI_GP:AEF86105.1;Name=AEF86105.1;Note=identified by match to protein family HMM PF00015;gbkey=CDS;product=methyl-accepting chemotaxis sensory transducer;protein_id=AEF86105.1;transl_table=11 CP001843.1 Genbank gene 2613183 2615531 . + . ID=gene2376;Name=TREPR_1655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1655 CP001843.1 Genbank CDS 2613183 2615531 . + 0 ID=cds2266;Parent=gene2376;Dbxref=NCBI_GP:AEF86803.1;Name=AEF86803.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=response regulator receiver domain protein;protein_id=AEF86803.1;transl_table=11 CP001843.1 Genbank gene 2615524 2617413 . + . ID=gene2377;Name=TREPR_1654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1654 CP001843.1 Genbank CDS 2615524 2617413 . + 0 ID=cds2267;Parent=gene2377;Dbxref=NCBI_GP:AEF84110.1;Name=AEF84110.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00211;gbkey=CDS;product=putative adenylate cyclase 2 (ATP pyrophosphate-lyase 2) (Adenylylcyclase 2) (AC2);protein_id=AEF84110.1;transl_table=11 CP001843.1 Genbank gene 2617483 2617761 . + . ID=gene2378;Name=TREPR_1653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1653 CP001843.1 Genbank CDS 2617483 2617761 . + 0 ID=cds2268;Parent=gene2378;Dbxref=NCBI_GP:AEF84964.1;Name=AEF84964.1;Note=identified by match to protein family HMM PF00639;gbkey=CDS;product=foldase protein PrsA;protein_id=AEF84964.1;transl_table=11 CP001843.1 Genbank gene 2617784 2619037 . + . ID=gene2379;Name=TREPR_1652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1652 CP001843.1 Genbank CDS 2617784 2619037 . + 0 ID=cds2269;Parent=gene2379;Dbxref=NCBI_GP:AEF86005.1;Name=AEF86005.1;Note=identified by match to protein family HMM PF01590%3B match to protein family HMM PF01966;gbkey=CDS;product=GAF domain/HD domain protein;protein_id=AEF86005.1;transl_table=11 CP001843.1 Genbank gene 2619044 2619514 . - . ID=gene2380;Name=TREPR_1651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1651 CP001843.1 Genbank CDS 2619044 2619514 . - 0 ID=cds2270;Parent=gene2380;Dbxref=NCBI_GP:AEF83827.1;Name=AEF83827.1;Note=identified by match to protein family HMM PF02639;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83827.1;transl_table=11 CP001843.1 Genbank gene 2619511 2620758 . - . ID=gene2381;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=TREPR_1650 CP001843.1 Genbank CDS 2619511 2620758 . - 0 ID=cds2271;Parent=gene2381;Dbxref=NCBI_GP:AEF84540.1;Name=AEF84540.1;Note=identified by match to protein family HMM PF01238%3B match to protein family HMM TIGR00218;gbkey=CDS;gene=manA;product=mannose-6-phosphate isomerase%2C class I;protein_id=AEF84540.1;transl_table=11 CP001843.1 Genbank gene 2620776 2621075 . - . ID=gene2382;Name=TREPR_1649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1649 CP001843.1 Genbank CDS 2620776 2621075 . - 0 ID=cds2272;Parent=gene2382;Dbxref=NCBI_GP:AEF86679.1;Name=AEF86679.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86679.1;transl_table=11 CP001843.1 Genbank gene 2621086 2621586 . - . ID=gene2383;Name=TREPR_1648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1648 CP001843.1 Genbank CDS 2621086 2621586 . - 0 ID=cds2273;Parent=gene2383;Dbxref=NCBI_GP:AEF86600.1;Name=AEF86600.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86600.1;transl_table=11 CP001843.1 Genbank gene 2621598 2621966 . - . ID=gene2384;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=TREPR_1647 CP001843.1 Genbank CDS 2621598 2621966 . - 0 ID=cds2274;Parent=gene2384;Dbxref=NCBI_GP:AEF84168.1;Name=AEF84168.1;Note=identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032;gbkey=CDS;gene=rplT;product=ribosomal protein L20;protein_id=AEF84168.1;transl_table=11 CP001843.1 Genbank gene 2622051 2622251 . - . ID=gene2385;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=TREPR_1646 CP001843.1 Genbank CDS 2622051 2622251 . - 0 ID=cds2275;Parent=gene2385;Dbxref=NCBI_GP:AEF84871.1;Name=AEF84871.1;Note=identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001;gbkey=CDS;gene=rpmI;product=ribosomal protein L35;protein_id=AEF84871.1;transl_table=11 CP001843.1 Genbank gene 2622269 2622784 . - . ID=gene2386;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=TREPR_1645 CP001843.1 Genbank CDS 2622269 2622784 . - 0 ID=cds2276;Parent=gene2386;Dbxref=NCBI_GP:AEF85278.1;Name=AEF85278.1;Note=identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168;gbkey=CDS;gene=infC;product=translation initiation factor IF-3;protein_id=AEF85278.1;transl_table=11 CP001843.1 Genbank gene 2623029 2623661 . + . ID=gene2387;Name=TREPR_1643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1643 CP001843.1 Genbank CDS 2623029 2623661 . + 0 ID=cds2277;Parent=gene2387;Dbxref=NCBI_GP:AEF85235.1;Name=AEF85235.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF85235.1;transl_table=11 CP001843.1 Genbank gene 2623730 2627794 . + . ID=gene2388;Name=TREPR_1642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1642 CP001843.1 Genbank CDS 2623730 2627794 . + 0 ID=cds2278;Parent=gene2388;Dbxref=NCBI_GP:AEF85932.1;Name=AEF85932.1;Note=identified by match to protein family HMM PF00691;gbkey=CDS;product=OmpA family protein;protein_id=AEF85932.1;transl_table=11 CP001843.1 Genbank gene 2627837 2628055 . - . ID=gene2389;Name=TREPR_1641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1641 CP001843.1 Genbank CDS 2627837 2628055 . - 0 ID=cds2279;Parent=gene2389;Dbxref=NCBI_GP:AEF84439.1;Name=AEF84439.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84439.1;transl_table=11 CP001843.1 Genbank gene 2628012 2628833 . + . ID=gene2390;Name=TREPR_1640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1640 CP001843.1 Genbank CDS 2628012 2628833 . + 0 ID=cds2280;Parent=gene2390;Dbxref=NCBI_GP:AEF85388.1;Name=AEF85388.1;gbkey=CDS;product=fnip;protein_id=AEF85388.1;transl_table=11 CP001843.1 Genbank gene 2628860 2629717 . - . ID=gene2391;Name=TREPR_1639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1639 CP001843.1 Genbank CDS 2628860 2629717 . - 0 ID=cds2281;Parent=gene2391;Dbxref=NCBI_GP:AEF86756.1;Name=AEF86756.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86756.1;transl_table=11 CP001843.1 Genbank gene 2629908 2647037 . - . ID=gene2392;Name=TREPR_1638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1638 CP001843.1 Genbank CDS 2629908 2647037 . - 0 ID=cds2282;Parent=gene2392;Dbxref=NCBI_GP:AEF83786.1;Name=AEF83786.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83786.1;transl_table=11 CP001843.1 Genbank gene 2647275 2648567 . + . ID=gene2393;Name=TREPR_1637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1637 CP001843.1 Genbank CDS 2647275 2648567 . + 0 ID=cds2283;Parent=gene2393;Dbxref=NCBI_GP:AEF84937.1;Name=AEF84937.1;Note=identified by match to protein family HMM PF00330%3B match to protein family HMM TIGR01343%3B match to protein family HMM TIGR02086;gbkey=CDS;product=3-isopropylmalate dehydratase large subunit 1 (isopropylmalate isomerase 1) (alpha-ipm isomerase 1) (ipmi 1);protein_id=AEF84937.1;transl_table=11 CP001843.1 Genbank gene 2648610 2649134 . + . ID=gene2394;Name=TREPR_1635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1635 CP001843.1 Genbank CDS 2648610 2649134 . + 0 ID=cds2284;Parent=gene2394;Dbxref=NCBI_GP:AEF85652.1;Name=AEF85652.1;Note=identified by match to protein family HMM PF00694;gbkey=CDS;product=3-isopropylmalate dehydratase small subunit 2 (isopropylmalate isomerase 2) (alpha-ipm isomerase 2) (ipmi 2);protein_id=AEF85652.1;transl_table=11 CP001843.1 Genbank gene 2649131 2650039 . - . ID=gene2395;Name=TREPR_1636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1636 CP001843.1 Genbank CDS 2649131 2650039 . - 0 ID=cds2285;Parent=gene2395;Dbxref=NCBI_GP:AEF86143.1;Name=AEF86143.1;Note=identified by match to protein family HMM PF08843;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86143.1;transl_table=11 CP001843.1 Genbank gene 2650036 2650668 . - . ID=gene2396;Name=TREPR_1634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1634 CP001843.1 Genbank CDS 2650036 2650668 . - 0 ID=cds2286;Parent=gene2396;Dbxref=NCBI_GP:AEF86565.1;Name=AEF86565.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86565.1;transl_table=11 CP001843.1 Genbank gene 2650725 2652728 . - . ID=gene2397;Name=TREPR_1633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1633 CP001843.1 Genbank CDS 2650725 2652728 . - 0 ID=cds2287;Parent=gene2397;Dbxref=NCBI_GP:AEF84044.1;Name=AEF84044.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=signal transduction histidine kinase;protein_id=AEF84044.1;transl_table=11 CP001843.1 Genbank gene 2652768 2653199 . + . ID=gene2398;Name=TREPR_1631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1631 CP001843.1 Genbank CDS 2652768 2653199 . + 0 ID=cds2288;Parent=gene2398;Dbxref=NCBI_GP:AEF84695.1;Name=AEF84695.1;Note=identified by match to protein family HMM PF03061;gbkey=CDS;product=thioesterase superfamily protein;protein_id=AEF84695.1;transl_table=11 CP001843.1 Genbank gene 2653171 2654346 . - . ID=gene2399;Name=TREPR_1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1632 CP001843.1 Genbank CDS 2653171 2654346 . - 0 ID=cds2289;Parent=gene2399;Dbxref=NCBI_GP:AEF85244.1;Name=AEF85244.1;Note=identified by match to protein family HMM PF07228;gbkey=CDS;product=Stage II sporulation protein E;protein_id=AEF85244.1;transl_table=11 CP001843.1 Genbank gene 2654359 2655531 . - . ID=gene2400;Name=TREPR_1630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1630 CP001843.1 Genbank CDS 2654359 2655531 . - 0 ID=cds2290;Parent=gene2400;Dbxref=NCBI_GP:AEF86793.1;Name=AEF86793.1;Note=identified by match to protein family HMM PF07228;gbkey=CDS;product=Stage II sporulation protein E;protein_id=AEF86793.1;transl_table=11 CP001843.1 Genbank gene 2655556 2656890 . + . ID=gene2401;Name=TREPR_1629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1629 CP001843.1 Genbank CDS 2655556 2656890 . + 0 ID=cds2291;Parent=gene2401;Dbxref=NCBI_GP:AEF86196.1;Name=AEF86196.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86196.1;transl_table=11 CP001843.1 Genbank gene 2656883 2657866 . + . ID=gene2402;Name=TREPR_1628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1628 CP001843.1 Genbank CDS 2656883 2657866 . + 0 ID=cds2292;Parent=gene2402;Dbxref=NCBI_GP:AEF83869.1;Name=AEF83869.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;product=glycosyltransferase%2C family 2;protein_id=AEF83869.1;transl_table=11 CP001843.1 Genbank gene 2657921 2659354 . + . ID=gene2403;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=TREPR_1627 CP001843.1 Genbank CDS 2657921 2659354 . + 0 ID=cds2293;Parent=gene2403;Dbxref=NCBI_GP:AEF86351.1;Name=AEF86351.1;Note=identified by match to protein family HMM PF01406%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;protein_id=AEF86351.1;transl_table=11 CP001843.1 Genbank gene 2659392 2659946 . + . ID=gene2404;Name=TREPR_1626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1626 CP001843.1 Genbank CDS 2659392 2659946 . + 0 ID=cds2294;Parent=gene2404;Dbxref=NCBI_GP:AEF83823.1;Name=AEF83823.1;Note=identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937;gbkey=CDS;product=RNA polymerase sigma-24 factor;protein_id=AEF83823.1;transl_table=11 CP001843.1 Genbank gene 2659936 2660514 . + . ID=gene2405;Name=TREPR_1625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1625 CP001843.1 Genbank CDS 2659936 2660514 . + 0 ID=cds2295;Parent=gene2405;Dbxref=NCBI_GP:AEF84648.1;Name=AEF84648.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84648.1;transl_table=11 CP001843.1 Genbank gene 2660511 2661059 . + . ID=gene2406;Name=TREPR_1624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1624 CP001843.1 Genbank CDS 2660511 2661059 . + 0 ID=cds2296;Parent=gene2406;Dbxref=NCBI_GP:AEF85482.1;Name=AEF85482.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85482.1;transl_table=11 CP001843.1 Genbank gene 2661062 2662690 . + . ID=gene2407;Name=TREPR_1623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1623 CP001843.1 Genbank CDS 2661062 2662690 . + 0 ID=cds2297;Parent=gene2407;Dbxref=NCBI_GP:AEF84809.1;Name=AEF84809.1;Note=identified by match to protein family HMM PF01833%3B match to protein family HMM PF01841;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84809.1;transl_table=11 CP001843.1 Genbank gene 2662714 2663397 . + . ID=gene2408;Name=TREPR_1622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1622 CP001843.1 Genbank CDS 2662714 2663397 . + 0 ID=cds2298;Parent=gene2408;Dbxref=NCBI_GP:AEF86672.1;Name=AEF86672.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02076;gbkey=CDS;product=putative uridylate kinase;protein_id=AEF86672.1;transl_table=11 CP001843.1 Genbank gene 2663475 2665130 . + . ID=gene2409;Name=TREPR_1621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1621 CP001843.1 Genbank CDS 2663475 2665130 . + 0 ID=cds2299;Parent=gene2409;Dbxref=NCBI_GP:AEF85844.1;Name=AEF85844.1;Note=identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02477;gbkey=CDS;product=diphosphate--fructose-6-phosphate 1-phosphotransferase;protein_id=AEF85844.1;transl_table=11 CP001843.1 Genbank gene 2665215 2667167 . - . ID=gene2410;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=TREPR_1620 CP001843.1 Genbank CDS 2665215 2667167 . - 0 ID=cds2300;Parent=gene2410;Dbxref=NCBI_GP:AEF85063.1;Name=AEF85063.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM PF09382%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389;gbkey=CDS;gene=recQ;product=ATP-dependent DNA helicase RecQ;protein_id=AEF85063.1;transl_table=11 CP001843.1 Genbank gene 2667182 2667775 . + . ID=gene2411;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=TREPR_1619 CP001843.1 Genbank CDS 2667182 2667775 . + 0 ID=cds2301;Parent=gene2411;Dbxref=NCBI_GP:AEF84397.1;Name=AEF84397.1;Note=identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042;gbkey=CDS;gene=rdgB;product=non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family;protein_id=AEF84397.1;transl_table=11 CP001843.1 Genbank gene 2667846 2668328 . + . ID=gene2412;Name=TREPR_1618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1618 CP001843.1 Genbank CDS 2667846 2668328 . + 0 ID=cds2302;Parent=gene2412;Dbxref=NCBI_GP:AEF86273.1;Name=AEF86273.1;Note=identified by match to protein family HMM PF06695;gbkey=CDS;product=small multidrug export protein;protein_id=AEF86273.1;transl_table=11 CP001843.1 Genbank gene 2668334 2670382 . + . ID=gene2413;Name=TREPR_1617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1617 CP001843.1 Genbank CDS 2668334 2670382 . + 0 ID=cds2303;Parent=gene2413;Dbxref=NCBI_GP:AEF86777.1;Name=AEF86777.1;Note=identified by match to protein family HMM PF00580;gbkey=CDS;product=helicase%2C UvrD/Rep family;protein_id=AEF86777.1;transl_table=11 CP001843.1 Genbank gene 2670489 2671607 . - . ID=gene2414;Name=TREPR_1616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1616 CP001843.1 Genbank CDS 2670489 2671607 . - 0 ID=cds2304;Parent=gene2414;Dbxref=NCBI_GP:AEF84251.1;Name=AEF84251.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;product=Ser/Thr protein phosphatase family protein;protein_id=AEF84251.1;transl_table=11 CP001843.1 Genbank gene 2671607 2672923 . - . ID=gene2415;Name=TREPR_1615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1615 CP001843.1 Genbank CDS 2671607 2672923 . - 0 ID=cds2305;Parent=gene2415;Dbxref=NCBI_GP:AEF84483.1;Name=AEF84483.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;product=DHH family protein;protein_id=AEF84483.1;transl_table=11 CP001843.1 Genbank gene 2673100 2673795 . + . ID=gene2416;Name=TREPR_1614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1614 CP001843.1 Genbank CDS 2673100 2673795 . + 0 ID=cds2306;Parent=gene2416;Dbxref=NCBI_GP:AEF85669.1;Name=AEF85669.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;product=GntR domain protein;protein_id=AEF85669.1;transl_table=11 CP001843.1 Genbank gene 2674000 2675001 . + . ID=gene2417;Name=TREPR_1612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1612 CP001843.1 Genbank CDS 2674000 2675001 . + 0 ID=cds2307;Parent=gene2417;Dbxref=NCBI_GP:AEF86594.1;Name=AEF86594.1;Note=identified by match to protein family HMM PF04041;gbkey=CDS;product=glycosylase;protein_id=AEF86594.1;transl_table=11 CP001843.1 Genbank gene 2675038 2676420 . + . ID=gene2418;Name=TREPR_1611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1611 CP001843.1 Genbank CDS 2675038 2676420 . + 0 ID=cds2308;Parent=gene2418;Dbxref=NCBI_GP:AEF84609.1;Name=AEF84609.1;Note=identified by match to protein family HMM PF00232%3B match to protein family HMM TIGR03356;gbkey=CDS;product=beta-galactosidase;protein_id=AEF84609.1;transl_table=11 CP001843.1 Genbank gene 2676443 2677741 . + . ID=gene2419;Name=TREPR_1610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1610 CP001843.1 Genbank CDS 2676443 2677741 . + 0 ID=cds2309;Parent=gene2419;Dbxref=NCBI_GP:AEF83624.1;Name=AEF83624.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative extracellular solute-binding protein%2C family 1;protein_id=AEF83624.1;transl_table=11 CP001843.1 Genbank gene 2677815 2678699 . + . ID=gene2420;Name=TREPR_1609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1609 CP001843.1 Genbank CDS 2677815 2678699 . + 0 ID=cds2310;Parent=gene2420;Dbxref=NCBI_GP:AEF85976.1;Name=AEF85976.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=sugar ABC transporter permease;protein_id=AEF85976.1;transl_table=11 CP001843.1 Genbank gene 2678702 2679550 . + . ID=gene2421;Name=TREPR_1608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1608 CP001843.1 Genbank CDS 2678702 2679550 . + 0 ID=cds2311;Parent=gene2421;Dbxref=NCBI_GP:AEF84962.1;Name=AEF84962.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=sugar ABC transporter permease;protein_id=AEF84962.1;transl_table=11 CP001843.1 Genbank gene 2679554 2680471 . + . ID=gene2422;Name=TREPR_1607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1607 CP001843.1 Genbank CDS 2679554 2680471 . + 0 ID=cds2312;Parent=gene2422;Dbxref=NCBI_GP:AEF84161.1;Name=AEF84161.1;Note=identified by match to protein family HMM PF00248;gbkey=CDS;product=oxidoreductase YdhF;protein_id=AEF84161.1;transl_table=11 CP001843.1 Genbank gene 2680491 2682209 . + . ID=gene2423;Name=TREPR_1606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1606 CP001843.1 Genbank CDS 2680491 2682209 . + 0 ID=cds2313;Parent=gene2423;Dbxref=NCBI_GP:AEF86845.1;Name=AEF86845.1;Note=identified by match to protein family HMM PF00920;gbkey=CDS;product=dihydroxy-acid dehydratase (DAD);protein_id=AEF86845.1;transl_table=11 CP001843.1 Genbank gene 2682282 2683631 . - . ID=gene2424;Name=TREPR_1605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1605 CP001843.1 Genbank CDS 2682282 2683631 . - 0 ID=cds2314;Parent=gene2424;Dbxref=NCBI_GP:AEF86091.1;Name=AEF86091.1;Note=identified by match to protein family HMM PF00232%3B match to protein family HMM TIGR03356;gbkey=CDS;product=beta-galactosidase;protein_id=AEF86091.1;transl_table=11 CP001843.1 Genbank gene 2683649 2686153 . - . ID=gene2425;Name=TREPR_1604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1604 CP001843.1 Genbank CDS 2683649 2686153 . - 0 ID=cds2315;Parent=gene2425;Dbxref=NCBI_GP:AEF85330.1;Name=AEF85330.1;Note=identified by match to protein family HMM PF02837;gbkey=CDS;product=beta-mannosidase;protein_id=AEF85330.1;transl_table=11 CP001843.1 Genbank gene 2686157 2686996 . - . ID=gene2426;Name=TREPR_1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1603 CP001843.1 Genbank CDS 2686157 2686996 . - 0 ID=cds2316;Parent=gene2426;Dbxref=NCBI_GP:AEF84884.1;Name=AEF84884.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF84884.1;transl_table=11 CP001843.1 Genbank gene 2687000 2687899 . - . ID=gene2427;Name=TREPR_1602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1602 CP001843.1 Genbank CDS 2687000 2687899 . - 0 ID=cds2317;Parent=gene2427;Dbxref=NCBI_GP:AEF85630.1;Name=AEF85630.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=sugar ABC transporter permease;protein_id=AEF85630.1;transl_table=11 CP001843.1 Genbank gene 2687996 2689345 . - . ID=gene2428;Name=TREPR_1601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1601 CP001843.1 Genbank CDS 2687996 2689345 . - 0 ID=cds2318;Parent=gene2428;Dbxref=NCBI_GP:AEF86427.1;Name=AEF86427.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative bacterial extracellular solute-binding protein;protein_id=AEF86427.1;transl_table=11 CP001843.1 Genbank gene 2689480 2692044 . + . ID=gene2429;Name=TREPR_1600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1600 CP001843.1 Genbank CDS 2689480 2692044 . + 0 ID=cds2319;Parent=gene2429;Dbxref=NCBI_GP:AEF84583.1;Name=AEF84583.1;Note=identified by match to protein family HMM PF06165%3B match to protein family HMM PF06205;gbkey=CDS;product=cellobiose phosphorylase;protein_id=AEF84583.1;transl_table=11 CP001843.1 Genbank gene 2692216 2693931 . - . ID=gene2430;Name=TREPR_1599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1599 CP001843.1 Genbank CDS 2692216 2693931 . - 0 ID=cds2320;Parent=gene2430;Dbxref=NCBI_GP:AEF85610.1;Name=AEF85610.1;Note=identified by match to protein family HMM PF00135;gbkey=CDS;product=para-nitroBenzyl esterase (pnb carboxy-esterase)(intracellular esterase b) (pnbce);protein_id=AEF85610.1;transl_table=11 CP001843.1 Genbank gene 2693907 2694065 . + . ID=gene2431;Name=TREPR_1598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1598 CP001843.1 Genbank CDS 2693907 2694065 . + 0 ID=cds2321;Parent=gene2431;Dbxref=NCBI_GP:AEF85973.1;Name=AEF85973.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85973.1;transl_table=11 CP001843.1 Genbank gene 2694320 2694435 . - . ID=gene2432;Name=rrfB;gbkey=Gene;gene=rrfB;gene_biotype=rRNA;locus_tag=TREPR_3918 CP001843.1 Genbank rRNA 2694320 2694435 . - . ID=rna43;Parent=gene2432;gbkey=rRNA;gene=rrfB;product=5S ribosomal RNA CP001843.1 Genbank exon 2694320 2694435 . - . ID=id49;Parent=rna43;gbkey=rRNA;gene=rrfB;product=5S ribosomal RNA CP001843.1 Genbank gene 2694623 2697532 . - . ID=gene2433;Name=rrlB;gbkey=Gene;gene=rrlB;gene_biotype=rRNA;locus_tag=TREPR_3917 CP001843.1 Genbank rRNA 2694623 2697532 . - . ID=rna44;Parent=gene2433;gbkey=rRNA;gene=rrlB;product=23S ribosomal RNA CP001843.1 Genbank exon 2694623 2697532 . - . ID=id50;Parent=rna44;gbkey=rRNA;gene=rrlB;product=23S ribosomal RNA CP001843.1 Genbank gene 2697727 2697800 . - . ID=gene2434;Name=TREPR_3916;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3916 CP001843.1 Genbank tRNA 2697727 2697800 . - . ID=rna45;Parent=gene2434;gbkey=tRNA;product=tRNA-Ala CP001843.1 Genbank exon 2697727 2697800 . - . ID=id51;Parent=rna45;gbkey=tRNA;product=tRNA-Ala CP001843.1 Genbank gene 2698050 2699512 . - . ID=gene2435;Name=rrsB;gbkey=Gene;gene=rrsB;gene_biotype=rRNA;locus_tag=TREPR_3915 CP001843.1 Genbank rRNA 2698050 2699512 . - . ID=rna46;Parent=gene2435;gbkey=rRNA;gene=rrsB;product=16S ribosomal RNA CP001843.1 Genbank exon 2698050 2699512 . - . ID=id52;Parent=rna46;gbkey=rRNA;gene=rrsB;product=16S ribosomal RNA CP001843.1 Genbank gene 2700048 2700179 . - . ID=gene2436;Name=TREPR_1592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1592 CP001843.1 Genbank CDS 2700048 2700179 . - 0 ID=cds2322;Parent=gene2436;Dbxref=NCBI_GP:AEF84940.1;Name=AEF84940.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84940.1;transl_table=11 CP001843.1 Genbank gene 2700154 2700537 . - . ID=gene2437;Name=TREPR_1591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1591 CP001843.1 Genbank CDS 2700154 2700537 . - 0 ID=cds2323;Parent=gene2437;Dbxref=NCBI_GP:AEF85866.1;Name=AEF85866.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85866.1;transl_table=11 CP001843.1 Genbank gene 2700641 2700802 . - . ID=gene2438;Name=TREPR_1590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1590 CP001843.1 Genbank CDS 2700641 2700802 . - 0 ID=cds2324;Parent=gene2438;Dbxref=NCBI_GP:AEF86425.1;Name=AEF86425.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86425.1;transl_table=11 CP001843.1 Genbank gene 2700764 2702755 . + . ID=gene2439;Name=TREPR_1589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1589 CP001843.1 Genbank CDS 2700764 2702755 . + 0 ID=cds2325;Parent=gene2439;Dbxref=NCBI_GP:AEF84869.1;Name=AEF84869.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00037%3B match to protein family HMM PF04060;gbkey=CDS;product=iron-sulfur cluster-binding family protein;protein_id=AEF84869.1;transl_table=11 CP001843.1 Genbank gene 2702896 2704938 . + . ID=gene2440;Name=fusA_2;gbkey=Gene;gene=fusA_2;gene_biotype=protein_coding;locus_tag=TREPR_1588 CP001843.1 Genbank CDS 2702896 2704938 . + 0 ID=cds2326;Parent=gene2440;Dbxref=NCBI_GP:AEF86138.1;Name=AEF86138.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484;gbkey=CDS;gene=fusA_2;product=translation elongation factor G;protein_id=AEF86138.1;transl_table=11 CP001843.1 Genbank gene 2705005 2709777 . - . ID=gene2441;Name=TREPR_1587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1587 CP001843.1 Genbank CDS 2705005 2709777 . - 0 ID=cds2327;Parent=gene2441;Dbxref=NCBI_GP:AEF83691.1;Name=AEF83691.1;Note=identified by match to protein family HMM PF00135%3B match to protein family HMM PF00753;gbkey=CDS;product=carboxylesterase family;protein_id=AEF83691.1;transl_table=11 CP001843.1 Genbank gene 2709765 2709944 . + . ID=gene2442;Name=TREPR_1585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1585 CP001843.1 Genbank CDS 2709765 2709944 . + 0 ID=cds2328;Parent=gene2442;Dbxref=NCBI_GP:AEF85713.1;Name=AEF85713.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85713.1;transl_table=11 CP001843.1 Genbank gene 2709934 2713692 . - . ID=gene2443;Name=TREPR_1586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1586 CP001843.1 Genbank CDS 2709934 2713692 . - 0 ID=cds2329;Parent=gene2443;Dbxref=NCBI_GP:AEF84425.1;Name=AEF84425.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229;gbkey=CDS;product=signal transduction histidine kinase;protein_id=AEF84425.1;transl_table=11 CP001843.1 Genbank gene 2713706 2714098 . - . ID=gene2444;Name=TREPR_1584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1584 CP001843.1 Genbank CDS 2713706 2714098 . - 0 ID=cds2330;Parent=gene2444;Dbxref=NCBI_GP:AEF86472.1;Name=AEF86472.1;Note=identified by match to protein family HMM PF02195;gbkey=CDS;product=transcriptional repressor protein KorB;protein_id=AEF86472.1;transl_table=11 CP001843.1 Genbank gene 2714193 2716913 . - . ID=gene2445;Name=TREPR_1583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1583 CP001843.1 Genbank CDS 2714193 2716913 . - 0 ID=cds2331;Parent=gene2445;Dbxref=NCBI_GP:AEF84147.1;Name=AEF84147.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074;gbkey=CDS;product=penicillin-binding protein 1A;protein_id=AEF84147.1;transl_table=11 CP001843.1 Genbank gene 2716925 2717548 . - . ID=gene2446;Name=TREPR_1582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1582 CP001843.1 Genbank CDS 2716925 2717548 . - 0 ID=cds2332;Parent=gene2446;Dbxref=NCBI_GP:AEF85039.1;Name=AEF85039.1;Note=identified by match to protein family HMM PF03358;gbkey=CDS;product=putative NADPH-dependent fmn reductase;protein_id=AEF85039.1;transl_table=11 CP001843.1 Genbank gene 2718403 2719404 . - . ID=gene2447;Name=TREPR_1580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1580 CP001843.1 Genbank CDS 2718403 2719404 . - 0 ID=cds2333;Parent=gene2447;Dbxref=NCBI_GP:AEF86855.1;Name=AEF86855.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86855.1;transl_table=11 CP001843.1 Genbank gene 2719401 2720381 . - . ID=gene2448;Name=TREPR_1579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1579 CP001843.1 Genbank CDS 2719401 2720381 . - 0 ID=cds2334;Parent=gene2448;Dbxref=NCBI_GP:AEF83880.1;Name=AEF83880.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;product=M23/M37 peptidase domain protein;protein_id=AEF83880.1;transl_table=11 CP001843.1 Genbank gene 2720418 2720588 . - . ID=gene2449;Name=TREPR_1578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1578 CP001843.1 Genbank CDS 2720418 2720588 . - 0 ID=cds2335;Parent=gene2449;Dbxref=NCBI_GP:AEF86783.1;Name=AEF86783.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=conserved domain protein;protein_id=AEF86783.1;transl_table=11 CP001843.1 Genbank gene 2720701 2722281 . - . ID=gene2450;Name=TREPR_1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1577 CP001843.1 Genbank CDS 2720701 2722281 . - 0 ID=cds2336;Parent=gene2450;Dbxref=NCBI_GP:AEF86009.1;Name=AEF86009.1;Note=identified by match to protein family HMM PF03065%3B match to protein family HMM PF09210;gbkey=CDS;product=glycoside hydrolase%2C family 57;protein_id=AEF86009.1;transl_table=11 CP001843.1 Genbank gene 2722282 2722974 . - . ID=gene2451;Name=TREPR_1576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1576 CP001843.1 Genbank CDS 2722282 2722974 . - 0 ID=cds2337;Parent=gene2451;Dbxref=NCBI_GP:AEF85246.1;Name=AEF85246.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85246.1;transl_table=11 CP001843.1 Genbank gene 2723073 2723690 . - . ID=gene2452;Name=TREPR_1575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1575 CP001843.1 Genbank CDS 2723073 2723690 . - 0 ID=cds2338;Parent=gene2452;Dbxref=NCBI_GP:AEF86210.1;Name=AEF86210.1;Note=identified by match to protein family HMM PF03358;gbkey=CDS;product=flavin reductase;protein_id=AEF86210.1;transl_table=11 CP001843.1 Genbank gene 2723824 2726391 . + . ID=gene2453;Name=TREPR_1574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1574 CP001843.1 Genbank CDS 2723824 2726391 . + 0 ID=cds2339;Parent=gene2453;Dbxref=NCBI_GP:AEF85432.1;Name=AEF85432.1;Note=identified by match to protein family HMM PF00672%3B match to protein family HMM PF07228;gbkey=CDS;product=hamp domain protein;protein_id=AEF85432.1;transl_table=11 CP001843.1 Genbank gene 2726477 2727634 . + . ID=gene2454;Name=TREPR_1573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1573 CP001843.1 Genbank CDS 2726477 2727634 . + 0 ID=cds2340;Parent=gene2454;Dbxref=NCBI_GP:AEF84510.1;Name=AEF84510.1;Note=identified by match to protein family HMM PF03825%3B match to protein family HMM PF07690;gbkey=CDS;product=transporter%2C major facilitator family;protein_id=AEF84510.1;transl_table=11 CP001843.1 Genbank gene 2727684 2728529 . - . ID=gene2455;Name=TREPR_1572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1572 CP001843.1 Genbank CDS 2727684 2728529 . - 0 ID=cds2341;Parent=gene2455;Dbxref=NCBI_GP:AEF83871.1;Name=AEF83871.1;Note=identified by match to protein family HMM PF02557;gbkey=CDS;product=carboxypeptidase;protein_id=AEF83871.1;transl_table=11 CP001843.1 Genbank gene 2728556 2729125 . - . ID=gene2456;Name=TREPR_1571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1571 CP001843.1 Genbank CDS 2728556 2729125 . - 0 ID=cds2342;Parent=gene2456;Dbxref=NCBI_GP:AEF86639.1;Name=AEF86639.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86639.1;transl_table=11 CP001843.1 Genbank gene 2729135 2731825 . - . ID=gene2457;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=TREPR_1570 CP001843.1 Genbank CDS 2729135 2731825 . - 0 ID=cds2343;Parent=gene2457;Dbxref=NCBI_GP:AEF85944.1;Name=AEF85944.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422;gbkey=CDS;gene=valS;product=valine--tRNA ligase;protein_id=AEF85944.1;transl_table=11 CP001843.1 Genbank gene 2731914 2733287 . - . ID=gene2458;Name=TREPR_1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1569 CP001843.1 Genbank CDS 2731914 2733287 . - 0 ID=cds2344;Parent=gene2458;Dbxref=NCBI_GP:AEF86443.1;Name=AEF86443.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF86443.1;transl_table=11 CP001843.1 Genbank pseudogene 2733303 2733530 . - . ID=gene2459;Name=TREPR_1568;Note=putative ferredoxin%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1568;pseudo=true CP001843.1 Genbank gene 2733502 2733618 . + . ID=gene2460;Name=TREPR_1567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1567 CP001843.1 Genbank CDS 2733502 2733618 . + 0 ID=cds2345;Parent=gene2460;Dbxref=NCBI_GP:AEF84484.1;Name=AEF84484.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84484.1;transl_table=11 CP001843.1 Genbank gene 2734319 2735692 . + . ID=gene2461;Name=TREPR_1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1564 CP001843.1 Genbank CDS 2734319 2735692 . + 0 ID=cds2346;Parent=gene2461;Dbxref=NCBI_GP:AEF85062.1;Name=AEF85062.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;product=putative amino acid transporter;protein_id=AEF85062.1;transl_table=11 CP001843.1 Genbank pseudogene 2735711 2736307 . + . ID=gene2462;Name=TREPR_1563;Note=cobalamin synthesis protein%2C P47K%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02492;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1563;pseudo=true CP001843.1 Genbank gene 2736463 2736750 . + . ID=gene2463;Name=TREPR_1562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1562 CP001843.1 Genbank CDS 2736463 2736750 . + 0 ID=cds2347;Parent=gene2463;Dbxref=NCBI_GP:AEF84317.1;Name=AEF84317.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84317.1;transl_table=11 CP001843.1 Genbank gene 2736893 2737801 . + . ID=gene2464;Name=TREPR_1561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1561 CP001843.1 Genbank CDS 2736893 2737801 . + 0 ID=cds2348;Parent=gene2464;Dbxref=NCBI_GP:AEF83932.1;Name=AEF83932.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;product=putative transcriptional regulator%2C LysR family;protein_id=AEF83932.1;transl_table=11 CP001843.1 Genbank gene 2737930 2738973 . + . ID=gene2465;Name=TREPR_1560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1560 CP001843.1 Genbank CDS 2737930 2738973 . + 0 ID=cds2349;Parent=gene2465;Dbxref=NCBI_GP:AEF84759.1;Name=AEF84759.1;gbkey=CDS;product=putative veratrol:corrinoid protein metyltransferase;protein_id=AEF84759.1;transl_table=11 CP001843.1 Genbank gene 2739043 2740224 . + . ID=gene2466;Name=TREPR_1559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1559 CP001843.1 Genbank CDS 2739043 2740224 . + 0 ID=cds2350;Parent=gene2466;Dbxref=NCBI_GP:AEF85834.1;Name=AEF85834.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=transporter%2C major facilitator family;protein_id=AEF85834.1;transl_table=11 CP001843.1 Genbank gene 2740341 2741351 . + . ID=gene2467;Name=TREPR_1558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1558 CP001843.1 Genbank CDS 2740341 2741351 . + 0 ID=cds2351;Parent=gene2467;Dbxref=NCBI_GP:AEF86821.1;Name=AEF86821.1;gbkey=CDS;product=putative veratrol:corrinoid protein metyltransferase;protein_id=AEF86821.1;transl_table=11 CP001843.1 Genbank gene 2741601 2742401 . + . ID=gene2468;Name=TREPR_1556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1556 CP001843.1 Genbank CDS 2741601 2742401 . + 0 ID=cds2352;Parent=gene2468;Dbxref=NCBI_GP:AEF85264.1;Name=AEF85264.1;Note=identified by match to protein family HMM PF00809;gbkey=CDS;product=methyl corrinoid protein;protein_id=AEF85264.1;transl_table=11 CP001843.1 Genbank gene 2742463 2743092 . + . ID=gene2469;Name=TREPR_1555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1555 CP001843.1 Genbank CDS 2742463 2743092 . + 0 ID=cds2353;Parent=gene2469;Dbxref=NCBI_GP:AEF86217.1;Name=AEF86217.1;Note=identified by match to protein family HMM PF02310%3B match to protein family HMM PF02607;gbkey=CDS;product=dimethylamine corrinoid protein;protein_id=AEF86217.1;transl_table=11 CP001843.1 Genbank gene 2743168 2743710 . + . ID=gene2470;Name=TREPR_1554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1554 CP001843.1 Genbank CDS 2743168 2743710 . + 0 ID=cds2354;Parent=gene2470;Dbxref=NCBI_GP:AEF83706.1;Name=AEF83706.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83706.1;transl_table=11 CP001843.1 Genbank gene 2743714 2745528 . + . ID=gene2471;Name=TREPR_1553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1553 CP001843.1 Genbank CDS 2743714 2745528 . + 0 ID=cds2355;Parent=gene2471;Dbxref=NCBI_GP:AEF84592.1;Name=AEF84592.1;Note=identified by match to protein family HMM PF00111;gbkey=CDS;product=ferredoxin;protein_id=AEF84592.1;transl_table=11 CP001843.1 Genbank gene 2745634 2746638 . - . ID=gene2472;Name=TREPR_1552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1552 CP001843.1 Genbank CDS 2745634 2746638 . - 0 ID=cds2356;Parent=gene2472;Dbxref=NCBI_GP:AEF85370.1;Name=AEF85370.1;gbkey=CDS;product=vanillate:corrinoid protein methyltransferase;protein_id=AEF85370.1;transl_table=11 CP001843.1 Genbank gene 2746835 2748352 . + . ID=gene2473;Name=TREPR_1550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1550 CP001843.1 Genbank CDS 2746835 2748352 . + 0 ID=cds2357;Parent=gene2473;Dbxref=NCBI_GP:AEF86521.1;Name=AEF86521.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86521.1;transl_table=11 CP001843.1 Genbank gene 2748374 2749945 . - . ID=gene2474;Name=TREPR_1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1549 CP001843.1 Genbank CDS 2748374 2749945 . - 0 ID=cds2358;Parent=gene2474;Dbxref=NCBI_GP:AEF85575.1;Name=AEF85575.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85575.1;transl_table=11 CP001843.1 Genbank gene 2749942 2750817 . - . ID=gene2475;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=TREPR_1548 CP001843.1 Genbank CDS 2749942 2750817 . - 0 ID=cds2359;Parent=gene2475;Dbxref=NCBI_GP:AEF84997.1;Name=AEF84997.1;Note=identified by match to protein family HMM PF02401%3B match to protein family HMM TIGR00216;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=AEF84997.1;transl_table=11 CP001843.1 Genbank gene 2750848 2752068 . - . ID=gene2476;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=TREPR_1547 CP001843.1 Genbank CDS 2750848 2752068 . - 0 ID=cds2360;Parent=gene2476;Dbxref=NCBI_GP:AEF86762.1;Name=AEF86762.1;Note=identified by match to protein family HMM PF02355%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966;gbkey=CDS;gene=secF;product=protein-export membrane protein SecF;protein_id=AEF86762.1;transl_table=11 CP001843.1 Genbank gene 2752068 2753723 . - . ID=gene2477;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=TREPR_1546 CP001843.1 Genbank CDS 2752068 2753723 . - 0 ID=cds2361;Parent=gene2477;Dbxref=NCBI_GP:AEF85752.1;Name=AEF85752.1;Note=identified by match to protein family HMM PF02355%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR01129;gbkey=CDS;gene=secD;product=protein-export membrane protein SecD;protein_id=AEF85752.1;transl_table=11 CP001843.1 Genbank gene 2753892 2754317 . - . ID=gene2478;Name=TREPR_1545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1545 CP001843.1 Genbank CDS 2753892 2754317 . - 0 ID=cds2362;Parent=gene2478;Dbxref=NCBI_GP:AEF85175.1;Name=AEF85175.1;Note=identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739;gbkey=CDS;product=preprotein translocase%2C YajC subunit;protein_id=AEF85175.1;transl_table=11 CP001843.1 Genbank gene 2754415 2754705 . - . ID=gene2479;Name=TREPR_1544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1544 CP001843.1 Genbank CDS 2754415 2754705 . - 0 ID=cds2363;Parent=gene2479;Dbxref=NCBI_GP:AEF84285.1;Name=AEF84285.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84285.1;transl_table=11 CP001843.1 Genbank gene 2754801 2754962 . - . ID=gene2480;Name=TREPR_1543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1543 CP001843.1 Genbank CDS 2754801 2754962 . - 0 ID=cds2364;Parent=gene2480;Dbxref=NCBI_GP:AEF84512.1;Name=AEF84512.1;Note=identified by match to protein family HMM PF00301;gbkey=CDS;product=rubredoxin;protein_id=AEF84512.1;transl_table=11 CP001843.1 Genbank gene 2754972 2755547 . - . ID=gene2481;Name=TREPR_1542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1542 CP001843.1 Genbank CDS 2754972 2755547 . - 0 ID=cds2365;Parent=gene2481;Dbxref=NCBI_GP:AEF83762.1;Name=AEF83762.1;Note=identified by match to protein family HMM PF00301%3B match to protein family HMM PF02915;gbkey=CDS;product=rubrerythrin;protein_id=AEF83762.1;transl_table=11 CP001843.1 Genbank gene 2756085 2757875 . - . ID=gene2482;Name=TREPR_1540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1540 CP001843.1 Genbank CDS 2756085 2757875 . - 0 ID=cds2366;Parent=gene2482;Dbxref=NCBI_GP:AEF85827.1;Name=AEF85827.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85827.1;transl_table=11 CP001843.1 Genbank gene 2758274 2760046 . - . ID=gene2483;Name=TREPR_1539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1539 CP001843.1 Genbank CDS 2758274 2760046 . - 0 ID=cds2367;Parent=gene2483;Dbxref=NCBI_GP:AEF85014.1;Name=AEF85014.1;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF85014.1;transl_table=11 CP001843.1 Genbank gene 2760043 2760681 . - . ID=gene2484;Name=TREPR_1538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1538 CP001843.1 Genbank CDS 2760043 2760681 . - 0 ID=cds2368;Parent=gene2484;Dbxref=NCBI_GP:AEF83939.1;Name=AEF83939.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF83939.1;transl_table=11 CP001843.1 Genbank gene 2760746 2761846 . + . ID=gene2485;Name=TREPR_1537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1537 CP001843.1 Genbank CDS 2760746 2761846 . + 0 ID=cds2369;Parent=gene2485;Dbxref=NCBI_GP:AEF85287.1;Name=AEF85287.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85287.1;transl_table=11 CP001843.1 Genbank gene 2761830 2761958 . + . ID=gene2486;Name=TREPR_1536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1536 CP001843.1 Genbank CDS 2761830 2761958 . + 0 ID=cds2370;Parent=gene2486;Dbxref=NCBI_GP:AEF84707.1;Name=AEF84707.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84707.1;transl_table=11 CP001843.1 Genbank gene 2761909 2763309 . + . ID=gene2487;Name=TREPR_1535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1535 CP001843.1 Genbank CDS 2761909 2763309 . + 0 ID=cds2371;Parent=gene2487;Dbxref=NCBI_GP:AEF85015.1;Name=AEF85015.1;Note=identified by match to protein family HMM PF01464%3B match to protein family HMM PF01476;gbkey=CDS;product=transglycosylase%2C SLT family;protein_id=AEF85015.1;transl_table=11 CP001843.1 Genbank gene 2763324 2764211 . + . ID=gene2488;Name=TREPR_1534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1534 CP001843.1 Genbank CDS 2763324 2764211 . + 0 ID=cds2372;Parent=gene2488;Dbxref=NCBI_GP:AEF84064.1;Name=AEF84064.1;gbkey=CDS;product=putative OmpA family protein;protein_id=AEF84064.1;transl_table=11 CP001843.1 Genbank gene 2764275 2766077 . + . ID=gene2489;Name=TREPR_1533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1533 CP001843.1 Genbank CDS 2764275 2766077 . + 0 ID=cds2373;Parent=gene2489;Dbxref=NCBI_GP:AEF86077.1;Name=AEF86077.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=putative transporter;protein_id=AEF86077.1;transl_table=11 CP001843.1 Genbank gene 2766085 2767185 . + . ID=gene2490;Name=TREPR_1532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1532 CP001843.1 Genbank CDS 2766085 2767185 . + 0 ID=cds2374;Parent=gene2490;Dbxref=NCBI_GP:AEF84836.1;Name=AEF84836.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein AppB;protein_id=AEF84836.1;transl_table=11 CP001843.1 Genbank gene 2767193 2769508 . + . ID=gene2491;Name=TREPR_1531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1531 CP001843.1 Genbank CDS 2767193 2769508 . + 0 ID=cds2375;Parent=gene2491;Dbxref=NCBI_GP:AEF84113.1;Name=AEF84113.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00528%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=peptide/opine/nickel uptake family ABC transporter%2C permease/ATP-binding protein;protein_id=AEF84113.1;transl_table=11 CP001843.1 Genbank gene 2769509 2770492 . + . ID=gene2492;Name=TREPR_1530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1530 CP001843.1 Genbank CDS 2769509 2770492 . + 0 ID=cds2376;Parent=gene2492;Dbxref=NCBI_GP:AEF83643.1;Name=AEF83643.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF83643.1;transl_table=11 CP001843.1 Genbank gene 2770572 2771360 . - . ID=gene2493;Name=TREPR_1529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1529 CP001843.1 Genbank CDS 2770572 2771360 . - 0 ID=cds2377;Parent=gene2493;Dbxref=NCBI_GP:AEF84529.1;Name=AEF84529.1;Note=identified by match to protein family HMM PF03668;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84529.1;transl_table=11 CP001843.1 Genbank gene 2771388 2772500 . - . ID=gene2494;Name=TREPR_1528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1528 CP001843.1 Genbank CDS 2771388 2772500 . - 0 ID=cds2378;Parent=gene2494;Dbxref=NCBI_GP:AEF85535.1;Name=AEF85535.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402;gbkey=CDS;product=tobe domain family;protein_id=AEF85535.1;transl_table=11 CP001843.1 Genbank gene 2772502 2774295 . - . ID=gene2495;Name=TREPR_1527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1527 CP001843.1 Genbank CDS 2772502 2774295 . - 0 ID=cds2379;Parent=gene2495;Dbxref=NCBI_GP:AEF85496.1;Name=AEF85496.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF85496.1;transl_table=11 CP001843.1 Genbank gene 2774393 2775523 . - . ID=gene2496;Name=TREPR_1526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1526 CP001843.1 Genbank CDS 2774393 2775523 . - 0 ID=cds2380;Parent=gene2496;Dbxref=NCBI_GP:AEF84461.1;Name=AEF84461.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=conserved hypothetical ABC transporter periplasmic solute-binding protein;protein_id=AEF84461.1;transl_table=11 CP001843.1 Genbank gene 2775712 2775825 . - . ID=gene2497;Name=TREPR_1525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1525 CP001843.1 Genbank CDS 2775712 2775825 . - 0 ID=cds2381;Parent=gene2497;Dbxref=NCBI_GP:AEF83791.1;Name=AEF83791.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83791.1;transl_table=11 CP001843.1 Genbank pseudogene 2775799 2777685 . + . ID=gene2498;Name=TREPR_1524;Note=ATP-dependent RNA helicase DbpA%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1524;pseudo=true CP001843.1 Genbank gene 2777740 2779437 . + . ID=gene2499;Name=TREPR_1523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1523 CP001843.1 Genbank CDS 2777740 2779437 . + 0 ID=cds2382;Parent=gene2499;Dbxref=NCBI_GP:AEF85042.1;Name=AEF85042.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter%2C ATP-binding protein;protein_id=AEF85042.1;transl_table=11 CP001843.1 Genbank gene 2779451 2780704 . - . ID=gene2500;Name=TREPR_1522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1522 CP001843.1 Genbank CDS 2779451 2780704 . - 0 ID=cds2383;Parent=gene2500;Dbxref=NCBI_GP:AEF83958.1;Name=AEF83958.1;gbkey=CDS;product=putative methyltransferase CmuC;protein_id=AEF83958.1;transl_table=11 CP001843.1 Genbank gene 2780724 2781710 . - . ID=gene2501;Name=TREPR_1521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1521 CP001843.1 Genbank CDS 2780724 2781710 . - 0 ID=cds2384;Parent=gene2501;Dbxref=NCBI_GP:AEF83707.1;Name=AEF83707.1;gbkey=CDS;product=putative sugar ABC-transporter%2C sugar-binding protein;protein_id=AEF83707.1;transl_table=11 CP001843.1 Genbank gene 2781769 2782731 . - . ID=gene2502;Name=TREPR_1520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1520 CP001843.1 Genbank CDS 2781769 2782731 . - 0 ID=cds2385;Parent=gene2502;Dbxref=NCBI_GP:AEF85485.1;Name=AEF85485.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=ribose transport system permease protein RbsC;protein_id=AEF85485.1;transl_table=11 CP001843.1 Genbank gene 2782709 2784217 . - . ID=gene2503;Name=TREPR_1519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1519 CP001843.1 Genbank CDS 2782709 2784217 . - 0 ID=cds2386;Parent=gene2503;Dbxref=NCBI_GP:AEF85806.1;Name=AEF85806.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=AEF85806.1;transl_table=11 CP001843.1 Genbank gene 2784355 2785272 . + . ID=gene2504;Name=TREPR_1518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1518 CP001843.1 Genbank CDS 2784355 2785272 . + 0 ID=cds2387;Parent=gene2504;Dbxref=NCBI_GP:AEF83925.1;Name=AEF83925.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02311;gbkey=CDS;product=transcriptional regulator%2C AraC family;protein_id=AEF83925.1;transl_table=11 CP001843.1 Genbank gene 2785318 2786865 . - . ID=gene2505;Name=TREPR_1517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1517 CP001843.1 Genbank CDS 2785318 2786865 . - 0 ID=cds2388;Parent=gene2505;Dbxref=NCBI_GP:AEF86893.1;Name=AEF86893.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86893.1;transl_table=11 CP001843.1 Genbank gene 2786862 2787296 . - . ID=gene2506;Name=TREPR_1516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1516 CP001843.1 Genbank CDS 2786862 2787296 . - 0 ID=cds2389;Parent=gene2506;Dbxref=NCBI_GP:AEF84346.1;Name=AEF84346.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84346.1;transl_table=11 CP001843.1 Genbank gene 2787445 2788359 . + . ID=gene2507;Name=TREPR_1514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1514 CP001843.1 Genbank CDS 2787445 2788359 . + 0 ID=cds2390;Parent=gene2507;Dbxref=NCBI_GP:AEF85323.1;Name=AEF85323.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=carbohydrate kinase%2C PfkB family;protein_id=AEF85323.1;transl_table=11 CP001843.1 Genbank gene 2788356 2789339 . + . ID=gene2508;Name=TREPR_1513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1513 CP001843.1 Genbank CDS 2788356 2789339 . + 0 ID=cds2391;Parent=gene2508;Dbxref=NCBI_GP:AEF83752.1;Name=AEF83752.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=putative transcriptional regulator;protein_id=AEF83752.1;transl_table=11 CP001843.1 Genbank gene 2789377 2790741 . + . ID=gene2509;Name=TREPR_1512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1512 CP001843.1 Genbank CDS 2789377 2790741 . + 0 ID=cds2392;Parent=gene2509;Dbxref=NCBI_GP:AEF84345.1;Name=AEF84345.1;Note=identified by match to protein family HMM PF02056;gbkey=CDS;product=glycoside hydrolase family 4;protein_id=AEF84345.1;transl_table=11 CP001843.1 Genbank gene 2790768 2791778 . + . ID=gene2510;Name=TREPR_1511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1511 CP001843.1 Genbank CDS 2790768 2791778 . + 0 ID=cds2393;Parent=gene2510;Dbxref=NCBI_GP:AEF85620.1;Name=AEF85620.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative ABC transporter%2C substrate binding protein;protein_id=AEF85620.1;transl_table=11 CP001843.1 Genbank gene 2791806 2793485 . + . ID=gene2511;Name=TREPR_1510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1510 CP001843.1 Genbank CDS 2791806 2793485 . + 0 ID=cds2394;Parent=gene2511;Dbxref=NCBI_GP:AEF86900.1;Name=AEF86900.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter permease protein;protein_id=AEF86900.1;transl_table=11 CP001843.1 Genbank gene 2793498 2794553 . + . ID=gene2512;Name=TREPR_1509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1509 CP001843.1 Genbank CDS 2793498 2794553 . + 0 ID=cds2395;Parent=gene2512;Dbxref=NCBI_GP:AEF84162.1;Name=AEF84162.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402;gbkey=CDS;product=Fe(3+) ions import ATP-binding protein FbpC;protein_id=AEF84162.1;transl_table=11 CP001843.1 Genbank gene 2794550 2795443 . + . ID=gene2513;Name=TREPR_1508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1508 CP001843.1 Genbank CDS 2794550 2795443 . + 0 ID=cds2396;Parent=gene2513;Dbxref=NCBI_GP:AEF84889.1;Name=AEF84889.1;gbkey=CDS;product=putative phosphoesterase PHP domain protein;protein_id=AEF84889.1;transl_table=11 CP001843.1 Genbank gene 2795506 2795676 . + . ID=gene2514;Name=TREPR_1507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1507 CP001843.1 Genbank CDS 2795506 2795676 . + 0 ID=cds2397;Parent=gene2514;Dbxref=NCBI_GP:AEF85629.1;Name=AEF85629.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85629.1;transl_table=11 CP001843.1 Genbank gene 2795678 2796763 . + . ID=gene2515;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=TREPR_1506 CP001843.1 Genbank CDS 2795678 2796763 . + 0 ID=cds2398;Parent=gene2515;Dbxref=NCBI_GP:AEF86475.1;Name=AEF86475.1;Note=identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=AEF86475.1;transl_table=11 CP001843.1 Genbank gene 2796775 2797755 . + . ID=gene2516;Name=hemK;gbkey=Gene;gene=hemK;gene_biotype=protein_coding;locus_tag=TREPR_1505 CP001843.1 Genbank CDS 2796775 2797755 . + 0 ID=cds2399;Parent=gene2516;Dbxref=NCBI_GP:AEF83736.1;Name=AEF83736.1;Note=identified by match to protein family HMM PF05175%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03387%3B match to protein family HMM TIGR03534;gbkey=CDS;gene=hemK;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=AEF83736.1;transl_table=11 CP001843.1 Genbank gene 2797760 2800027 . + . ID=gene2517;Name=TREPR_1504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1504 CP001843.1 Genbank CDS 2797760 2800027 . + 0 ID=cds2400;Parent=gene2517;Dbxref=NCBI_GP:AEF84401.1;Name=AEF84401.1;Note=identified by match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691;gbkey=CDS;product=GTP diphosphokinase;protein_id=AEF84401.1;transl_table=11 CP001843.1 Genbank gene 2800111 2800311 . - . ID=gene2518;Name=TREPR_1503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1503 CP001843.1 Genbank CDS 2800111 2800311 . - 0 ID=cds2401;Parent=gene2518;Dbxref=NCBI_GP:AEF83598.1;Name=AEF83598.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83598.1;transl_table=11 CP001843.1 Genbank gene 2800324 2800863 . - . ID=gene2519;Name=TREPR_1502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1502 CP001843.1 Genbank CDS 2800324 2800863 . - 0 ID=cds2402;Parent=gene2519;Dbxref=NCBI_GP:AEF84525.1;Name=AEF84525.1;Note=identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059;gbkey=CDS;product=50S ribosomal protein L17;protein_id=AEF84525.1;transl_table=11 CP001843.1 Genbank gene 2800853 2801908 . - . ID=gene2520;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=TREPR_1501 CP001843.1 Genbank CDS 2800853 2801908 . - 0 ID=cds2403;Parent=gene2520;Dbxref=NCBI_GP:AEF86850.1;Name=AEF86850.1;Note=identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027;gbkey=CDS;gene=rpoA;product=DNA-directed RNA polymerase%2C alpha subunit;protein_id=AEF86850.1;transl_table=11 CP001843.1 Genbank gene 2801918 2802553 . - . ID=gene2521;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=TREPR_1500 CP001843.1 Genbank CDS 2801918 2802553 . - 0 ID=cds2404;Parent=gene2521;Dbxref=NCBI_GP:AEF85299.1;Name=AEF85299.1;Note=identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017;gbkey=CDS;gene=rpsD;product=ribosomal protein S4;protein_id=AEF85299.1;transl_table=11 CP001843.1 Genbank gene 2802613 2802996 . - . ID=gene2522;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=TREPR_1499 CP001843.1 Genbank CDS 2802613 2802996 . - 0 ID=cds2405;Parent=gene2522;Dbxref=NCBI_GP:AEF86344.1;Name=AEF86344.1;Note=identified by match to protein family HMM PF00411;gbkey=CDS;gene=rpsK;product=ribosomal protein S11;protein_id=AEF86344.1;transl_table=11 CP001843.1 Genbank gene 2803024 2803389 . - . ID=gene2523;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=TREPR_1498 CP001843.1 Genbank CDS 2803024 2803389 . - 0 ID=cds2406;Parent=gene2523;Dbxref=NCBI_GP:AEF84273.1;Name=AEF84273.1;Note=identified by match to protein family HMM PF00416;gbkey=CDS;gene=rpsM;product=ribosomal protein S13p/S18e;protein_id=AEF84273.1;transl_table=11 CP001843.1 Genbank gene 2803614 2804942 . - . ID=gene2524;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=TREPR_1497 CP001843.1 Genbank CDS 2803614 2804942 . - 0 ID=cds2407;Parent=gene2524;Dbxref=NCBI_GP:AEF85095.1;Name=AEF85095.1;Note=identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967;gbkey=CDS;gene=secY;product=preprotein translocase%2C SecY subunit;protein_id=AEF85095.1;transl_table=11 CP001843.1 Genbank gene 2804942 2805394 . - . ID=gene2525;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=TREPR_1496 CP001843.1 Genbank CDS 2804942 2805394 . - 0 ID=cds2408;Parent=gene2525;Dbxref=NCBI_GP:AEF85481.1;Name=AEF85481.1;Note=identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071;gbkey=CDS;gene=rplO;product=ribosomal protein L15;protein_id=AEF85481.1;transl_table=11 CP001843.1 Genbank gene 2805394 2805579 . - . ID=gene2526;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=TREPR_1495 CP001843.1 Genbank CDS 2805394 2805579 . - 0 ID=cds2409;Parent=gene2526;Dbxref=NCBI_GP:AEF86325.1;Name=AEF86325.1;Note=identified by match to protein family HMM PF00327%3B match to protein family HMM TIGR01308;gbkey=CDS;gene=rpmD;product=ribosomal protein L30;protein_id=AEF86325.1;transl_table=11 CP001843.1 Genbank gene 2805582 2806109 . - . ID=gene2527;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=TREPR_1494 CP001843.1 Genbank CDS 2805582 2806109 . - 0 ID=cds2410;Parent=gene2527;Dbxref=NCBI_GP:AEF84243.1;Name=AEF84243.1;Note=identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021;gbkey=CDS;gene=rpsE;product=ribosomal protein S5;protein_id=AEF84243.1;transl_table=11 CP001843.1 Genbank gene 2806118 2806480 . - . ID=gene2528;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=TREPR_1493 CP001843.1 Genbank CDS 2806118 2806480 . - 0 ID=cds2411;Parent=gene2528;Dbxref=NCBI_GP:AEF85203.1;Name=AEF85203.1;Note=identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060;gbkey=CDS;gene=rplR;product=ribosomal protein L18;protein_id=AEF85203.1;transl_table=11 CP001843.1 Genbank gene 2806537 2807076 . - . ID=gene2529;Name=TREPR_1492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1492 CP001843.1 Genbank CDS 2806537 2807076 . - 0 ID=cds2412;Parent=gene2529;Dbxref=NCBI_GP:AEF86779.1;Name=AEF86779.1;Note=identified by match to protein family HMM PF00347;gbkey=CDS;product=50S ribosomal protein L6 (BL10);protein_id=AEF86779.1;transl_table=11 CP001843.1 Genbank gene 2807087 2807485 . - . ID=gene2530;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=TREPR_1491 CP001843.1 Genbank CDS 2807087 2807485 . - 0 ID=cds2413;Parent=gene2530;Dbxref=NCBI_GP:AEF84118.1;Name=AEF84118.1;Note=identified by match to protein family HMM PF00410;gbkey=CDS;gene=rpsH;product=ribosomal protein S8;protein_id=AEF84118.1;transl_table=11 CP001843.1 Genbank gene 2807495 2807680 . - . ID=gene2531;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=TREPR_1490 CP001843.1 Genbank CDS 2807495 2807680 . - 0 ID=cds2414;Parent=gene2531;Dbxref=NCBI_GP:AEF83855.1;Name=AEF83855.1;Note=identified by match to protein family HMM PF00253;gbkey=CDS;gene=rpsN;product=ribosomal protein S14p/S29e;protein_id=AEF83855.1;transl_table=11 CP001843.1 Genbank pseudogene 2807688 2808191 . - . ID=gene2532;Name=TREPR_1489;Note=50S ribosomal protein L5 (BL6)%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1489;pseudo=true CP001843.1 Genbank gene 2808237 2808599 . - . ID=gene2533;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=TREPR_1488 CP001843.1 Genbank CDS 2808237 2808599 . - 0 ID=cds2415;Parent=gene2533;Dbxref=NCBI_GP:AEF85378.1;Name=AEF85378.1;Note=identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079;gbkey=CDS;gene=rplX;product=ribosomal protein L24;protein_id=AEF85378.1;transl_table=11 CP001843.1 Genbank gene 2808623 2808991 . - . ID=gene2534;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=TREPR_1487 CP001843.1 Genbank CDS 2808623 2808991 . - 0 ID=cds2416;Parent=gene2534;Dbxref=NCBI_GP:AEF86373.1;Name=AEF86373.1;Note=identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067;gbkey=CDS;gene=rplN;product=ribosomal protein L14;protein_id=AEF86373.1;transl_table=11 CP001843.1 Genbank gene 2809006 2809314 . - . ID=gene2535;Name=TREPR_1486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1486 CP001843.1 Genbank CDS 2809006 2809314 . - 0 ID=cds2417;Parent=gene2535;Dbxref=NCBI_GP:AEF84498.1;Name=AEF84498.1;Note=identified by match to protein family HMM PF00366;gbkey=CDS;product=30S ribosomal protein S17;protein_id=AEF84498.1;transl_table=11 CP001843.1 Genbank gene 2809325 2809546 . - . ID=gene2536;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=TREPR_1485 CP001843.1 Genbank CDS 2809325 2809546 . - 0 ID=cds2418;Parent=gene2536;Dbxref=NCBI_GP:AEF85275.1;Name=AEF85275.1;Note=identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012;gbkey=CDS;gene=rpmC;product=ribosomal protein L29;protein_id=AEF85275.1;transl_table=11 CP001843.1 Genbank gene 2809560 2809985 . - . ID=gene2537;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=TREPR_1484 CP001843.1 Genbank CDS 2809560 2809985 . - 0 ID=cds2419;Parent=gene2537;Dbxref=NCBI_GP:AEF86051.1;Name=AEF86051.1;Note=identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164;gbkey=CDS;gene=rplP;product=ribosomal protein L16;protein_id=AEF86051.1;transl_table=11 CP001843.1 Genbank gene 2810053 2810760 . - . ID=gene2538;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=TREPR_1483 CP001843.1 Genbank CDS 2810053 2810760 . - 0 ID=cds2420;Parent=gene2538;Dbxref=NCBI_GP:AEF86616.1;Name=AEF86616.1;Note=identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009;gbkey=CDS;gene=rpsC;product=ribosomal protein S3;protein_id=AEF86616.1;transl_table=11 CP001843.1 Genbank gene 2810761 2811132 . - . ID=gene2539;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=TREPR_1482 CP001843.1 Genbank CDS 2810761 2811132 . - 0 ID=cds2421;Parent=gene2539;Dbxref=NCBI_GP:AEF84912.1;Name=AEF84912.1;Note=identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044;gbkey=CDS;gene=rplV;product=ribosomal protein L22;protein_id=AEF84912.1;transl_table=11 CP001843.1 Genbank gene 2811141 2811422 . - . ID=gene2540;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=TREPR_1481 CP001843.1 Genbank CDS 2811141 2811422 . - 0 ID=cds2422;Parent=gene2540;Dbxref=NCBI_GP:AEF85722.1;Name=AEF85722.1;Note=identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050;gbkey=CDS;gene=rpsS;product=ribosomal protein S19;protein_id=AEF85722.1;transl_table=11 CP001843.1 Genbank gene 2811432 2812262 . - . ID=gene2541;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=TREPR_1480 CP001843.1 Genbank CDS 2811432 2812262 . - 0 ID=cds2423;Parent=gene2541;Dbxref=NCBI_GP:AEF84855.1;Name=AEF84855.1;Note=identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171;gbkey=CDS;gene=rplB;product=ribosomal protein L2;protein_id=AEF84855.1;transl_table=11 CP001843.1 Genbank gene 2812286 2812573 . - . ID=gene2542;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=TREPR_1479 CP001843.1 Genbank CDS 2812286 2812573 . - 0 ID=cds2424;Parent=gene2542;Dbxref=NCBI_GP:AEF85633.1;Name=AEF85633.1;Note=identified by match to protein family HMM PF00276;gbkey=CDS;gene=rplW;product=ribosomal protein L23;protein_id=AEF85633.1;transl_table=11 CP001843.1 Genbank gene 2812570 2813241 . - . ID=gene2543;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=TREPR_1478 CP001843.1 Genbank CDS 2812570 2813241 . - 0 ID=cds2425;Parent=gene2543;Dbxref=NCBI_GP:AEF86413.1;Name=AEF86413.1;Note=identified by match to protein family HMM PF00573;gbkey=CDS;gene=rplD;product=ribosomal protein%2C L4/L1 family;protein_id=AEF86413.1;transl_table=11 CP001843.1 Genbank gene 2813252 2813872 . - . ID=gene2544;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=TREPR_1477 CP001843.1 Genbank CDS 2813252 2813872 . - 0 ID=cds2426;Parent=gene2544;Dbxref=NCBI_GP:AEF83682.1;Name=AEF83682.1;Note=identified by match to protein family HMM PF00297;gbkey=CDS;gene=rplC;product=ribosomal protein L3;protein_id=AEF83682.1;transl_table=11 CP001843.1 Genbank gene 2813910 2814218 . - . ID=gene2545;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=TREPR_1476 CP001843.1 Genbank CDS 2813910 2814218 . - 0 ID=cds2427;Parent=gene2545;Dbxref=NCBI_GP:AEF85450.1;Name=AEF85450.1;Note=identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049;gbkey=CDS;gene=rpsJ;product=ribosomal protein S10;protein_id=AEF85450.1;transl_table=11 CP001843.1 Genbank gene 2814291 2815481 . - . ID=gene2546;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=TREPR_1475 CP001843.1 Genbank CDS 2814291 2815481 . - 0 ID=cds2428;Parent=gene2546;Dbxref=NCBI_GP:AEF86216.1;Name=AEF86216.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485;gbkey=CDS;gene=tuf;product=translation elongation factor Tu;protein_id=AEF86216.1;transl_table=11 CP001843.1 Genbank gene 2816095 2816565 . - . ID=gene2547;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=TREPR_1472 CP001843.1 Genbank CDS 2816095 2816565 . - 0 ID=cds2429;Parent=gene2547;Dbxref=NCBI_GP:AEF84015.1;Name=AEF84015.1;Note=identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029;gbkey=CDS;gene=rpsG;product=ribosomal protein S7;protein_id=AEF84015.1;transl_table=11 CP001843.1 Genbank gene 2816576 2816950 . - . ID=gene2548;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=TREPR_1471 CP001843.1 Genbank CDS 2816576 2816950 . - 0 ID=cds2430;Parent=gene2548;Dbxref=NCBI_GP:AEF84632.1;Name=AEF84632.1;Note=identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981;gbkey=CDS;gene=rpsL;product=ribosomal protein S12;protein_id=AEF84632.1;transl_table=11 CP001843.1 Genbank gene 2817173 2817484 . - . ID=gene2549;Name=TREPR_1470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1470 CP001843.1 Genbank CDS 2817173 2817484 . - 0 ID=cds2431;Parent=gene2549;Dbxref=NCBI_GP:AEF84986.1;Name=AEF84986.1;Note=identified by match to protein family HMM PF05016;gbkey=CDS;product=putative addiction module toxin%2C RelE/StbE family;protein_id=AEF84986.1;transl_table=11 CP001843.1 Genbank gene 2817477 2817731 . - . ID=gene2550;Name=TREPR_1469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1469 CP001843.1 Genbank CDS 2817477 2817731 . - 0 ID=cds2432;Parent=gene2550;Dbxref=NCBI_GP:AEF86417.1;Name=AEF86417.1;Note=identified by match to protein family HMM TIGR01552;gbkey=CDS;product=prevent-host-death family protein;protein_id=AEF86417.1;transl_table=11 CP001843.1 Genbank gene 2817913 2819154 . + . ID=gene2551;Name=TREPR_1468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1468 CP001843.1 Genbank CDS 2817913 2819154 . + 0 ID=cds2433;Parent=gene2551;Dbxref=NCBI_GP:AEF86934.1;Name=AEF86934.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402%3B match to protein family HMM TIGR01187;gbkey=CDS;product=spermidine/putrescine ABC transporter ATP-binding subunit;protein_id=AEF86934.1;transl_table=11 CP001843.1 Genbank gene 2819151 2820056 . + . ID=gene2552;Name=TREPR_1467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1467 CP001843.1 Genbank CDS 2819151 2820056 . + 0 ID=cds2434;Parent=gene2552;Dbxref=NCBI_GP:AEF85736.1;Name=AEF85736.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=spermidine/putrescine transport system permease protein PotB;protein_id=AEF85736.1;transl_table=11 CP001843.1 Genbank gene 2820053 2820946 . + . ID=gene2553;Name=TREPR_1466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1466 CP001843.1 Genbank CDS 2820053 2820946 . + 0 ID=cds2435;Parent=gene2553;Dbxref=NCBI_GP:AEF85796.1;Name=AEF85796.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ornithine carbamoyltransferase;protein_id=AEF85796.1;transl_table=11 CP001843.1 Genbank gene 2820943 2822010 . + . ID=gene2554;Name=TREPR_1465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1465 CP001843.1 Genbank CDS 2820943 2822010 . + 0 ID=cds2436;Parent=gene2554;Dbxref=NCBI_GP:AEF85103.1;Name=AEF85103.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=spermidine/putrescine-binding periplasmic protein;protein_id=AEF85103.1;transl_table=11 CP001843.1 Genbank gene 2822036 2822179 . - . ID=gene2555;Name=TREPR_1464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1464 CP001843.1 Genbank CDS 2822036 2822179 . - 0 ID=cds2437;Parent=gene2555;Dbxref=NCBI_GP:AEF84134.1;Name=AEF84134.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84134.1;transl_table=11 CP001843.1 Genbank gene 2822436 2823368 . - . ID=gene2556;Name=TREPR_1463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1463 CP001843.1 Genbank CDS 2822436 2823368 . - 0 ID=cds2438;Parent=gene2556;Dbxref=NCBI_GP:AEF86644.1;Name=AEF86644.1;gbkey=CDS;product=outer membrane autotransporter barrel domain protein;protein_id=AEF86644.1;transl_table=11 CP001843.1 Genbank gene 2823743 2825947 . - . ID=gene2557;Name=TREPR_1462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1462 CP001843.1 Genbank CDS 2823743 2825947 . - 0 ID=cds2439;Parent=gene2557;Dbxref=NCBI_GP:AEF84740.1;Name=AEF84740.1;gbkey=CDS;product=parallel beta-helix repeat protein;protein_id=AEF84740.1;transl_table=11 CP001843.1 Genbank gene 2826517 2826924 . + . ID=gene2558;Name=TREPR_1460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1460 CP001843.1 Genbank CDS 2826517 2826924 . + 0 ID=cds2440;Parent=gene2558;Dbxref=NCBI_GP:AEF84096.1;Name=AEF84096.1;Note=identified by match to protein family HMM PF01814%3B match to protein family HMM TIGR02481;gbkey=CDS;product=hemerythrin;protein_id=AEF84096.1;transl_table=11 CP001843.1 Genbank gene 2826969 2828774 . - . ID=gene2559;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=TREPR_1459 CP001843.1 Genbank CDS 2826969 2828774 . - 0 ID=cds2441;Parent=gene2559;Dbxref=NCBI_GP:AEF85719.1;Name=AEF85719.1;Note=identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR00181;gbkey=CDS;gene=pepF;product=oligoendopeptidase F;protein_id=AEF85719.1;transl_table=11 CP001843.1 Genbank gene 2828846 2829706 . + . ID=gene2560;Name=TREPR_1458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1458 CP001843.1 Genbank CDS 2828846 2829706 . + 0 ID=cds2442;Parent=gene2560;Dbxref=NCBI_GP:AEF85056.1;Name=AEF85056.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85056.1;transl_table=11 CP001843.1 Genbank gene 2830138 2830701 . + . ID=gene2561;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=TREPR_1457 CP001843.1 Genbank CDS 2830138 2830701 . + 0 ID=cds2443;Parent=gene2561;Dbxref=NCBI_GP:AEF86259.1;Name=AEF86259.1;Note=identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038;gbkey=CDS;gene=efp;product=translation elongation factor P;protein_id=AEF86259.1;transl_table=11 CP001843.1 Genbank gene 2830844 2832103 . + . ID=gene2562;Name=TREPR_1456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1456 CP001843.1 Genbank CDS 2830844 2832103 . + 0 ID=cds2444;Parent=gene2562;Dbxref=NCBI_GP:AEF86651.1;Name=AEF86651.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86651.1;transl_table=11 CP001843.1 Genbank gene 2832295 2832711 . - . ID=gene2563;Name=TREPR_1455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1455 CP001843.1 Genbank CDS 2832295 2832711 . - 0 ID=cds2445;Parent=gene2563;Dbxref=NCBI_GP:AEF85871.1;Name=AEF85871.1;gbkey=CDS;product=15 kDa lipoprotein;protein_id=AEF85871.1;transl_table=11 CP001843.1 Genbank gene 2832708 2833403 . - . ID=gene2564;Name=TREPR_1454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1454 CP001843.1 Genbank CDS 2832708 2833403 . - 0 ID=cds2446;Parent=gene2564;Dbxref=NCBI_GP:AEF83893.1;Name=AEF83893.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=macrolide export ATP-binding/permease protein MacB 1/2;protein_id=AEF83893.1;transl_table=11 CP001843.1 Genbank gene 2833443 2834585 . - . ID=gene2565;Name=TREPR_1453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1453 CP001843.1 Genbank CDS 2833443 2834585 . - 0 ID=cds2447;Parent=gene2565;Dbxref=NCBI_GP:AEF86638.1;Name=AEF86638.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=permease domain protein;protein_id=AEF86638.1;transl_table=11 CP001843.1 Genbank gene 2834575 2835858 . - . ID=gene2566;Name=TREPR_1452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1452 CP001843.1 Genbank CDS 2834575 2835858 . - 0 ID=cds2448;Parent=gene2566;Dbxref=NCBI_GP:AEF85460.1;Name=AEF85460.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;product=ABC transporter permease protein;protein_id=AEF85460.1;transl_table=11 CP001843.1 Genbank gene 2835860 2837110 . - . ID=gene2567;Name=TREPR_1451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1451 CP001843.1 Genbank CDS 2835860 2837110 . - 0 ID=cds2449;Parent=gene2567;Dbxref=NCBI_GP:AEF84786.1;Name=AEF84786.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF84786.1;transl_table=11 CP001843.1 Genbank gene 2837228 2837809 . - . ID=gene2568;Name=TREPR_1450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1450 CP001843.1 Genbank CDS 2837228 2837809 . - 0 ID=cds2450;Parent=gene2568;Dbxref=NCBI_GP:AEF86522.1;Name=AEF86522.1;gbkey=CDS;product=34 kDa membrane antigen (Pathogen-specific membraneantigen);protein_id=AEF86522.1;transl_table=11 CP001843.1 Genbank gene 2837879 2839033 . - . ID=gene2569;Name=TREPR_1449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1449 CP001843.1 Genbank CDS 2837879 2839033 . - 0 ID=cds2451;Parent=gene2569;Dbxref=NCBI_GP:AEF83540.1;Name=AEF83540.1;Note=identified by match to protein family HMM PF03239;gbkey=CDS;product=high-affinity iron permease;protein_id=AEF83540.1;transl_table=11 CP001843.1 Genbank gene 2839032 2839295 . + . ID=gene2570;Name=TREPR_1448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1448 CP001843.1 Genbank CDS 2839032 2839295 . + 0 ID=cds2452;Parent=gene2570;Dbxref=NCBI_GP:AEF85791.1;Name=AEF85791.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85791.1;transl_table=11 CP001843.1 Genbank gene 2839575 2839766 . + . ID=gene2571;Name=TREPR_1447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1447 CP001843.1 Genbank CDS 2839575 2839766 . + 0 ID=cds2453;Parent=gene2571;Dbxref=NCBI_GP:AEF86771.1;Name=AEF86771.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86771.1;transl_table=11 CP001843.1 Genbank gene 2839778 2840146 . + . ID=gene2572;Name=TREPR_1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1446 CP001843.1 Genbank CDS 2839778 2840146 . + 0 ID=cds2454;Parent=gene2572;Dbxref=NCBI_GP:AEF84292.1;Name=AEF84292.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=PIN domain protein;protein_id=AEF84292.1;transl_table=11 CP001843.1 Genbank gene 2840181 2841665 . - . ID=gene2573;Name=TREPR_1445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1445 CP001843.1 Genbank CDS 2840181 2841665 . - 0 ID=cds2455;Parent=gene2573;Dbxref=NCBI_GP:AEF85113.1;Name=AEF85113.1;Note=identified by match to protein family HMM PF07364;gbkey=CDS;product=MlrC domain protein;protein_id=AEF85113.1;transl_table=11 CP001843.1 Genbank gene 2841675 2842520 . - . ID=gene2574;Name=TREPR_1444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1444 CP001843.1 Genbank CDS 2841675 2842520 . - 0 ID=cds2456;Parent=gene2574;Dbxref=NCBI_GP:AEF85611.1;Name=AEF85611.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=sugar ABC transporter permease;protein_id=AEF85611.1;transl_table=11 CP001843.1 Genbank gene 2842530 2843411 . - . ID=gene2575;Name=TREPR_1443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1443 CP001843.1 Genbank CDS 2842530 2843411 . - 0 ID=cds2457;Parent=gene2575;Dbxref=NCBI_GP:AEF86363.1;Name=AEF86363.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=sugar ABC transporter permease;protein_id=AEF86363.1;transl_table=11 CP001843.1 Genbank gene 2843514 2844821 . - . ID=gene2576;Name=TREPR_1442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1442 CP001843.1 Genbank CDS 2843514 2844821 . - 0 ID=cds2458;Parent=gene2576;Dbxref=NCBI_GP:AEF84862.1;Name=AEF84862.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative bacterial extracellular solute-binding protein;protein_id=AEF84862.1;transl_table=11 CP001843.1 Genbank gene 2844968 2845783 . + . ID=gene2577;Name=TREPR_1441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1441 CP001843.1 Genbank CDS 2844968 2845783 . + 0 ID=cds2459;Parent=gene2577;Dbxref=NCBI_GP:AEF84778.1;Name=AEF84778.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84778.1;transl_table=11 CP001843.1 Genbank gene 2845993 2846259 . + . ID=gene2578;Name=TREPR_1440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1440 CP001843.1 Genbank CDS 2845993 2846259 . + 0 ID=cds2460;Parent=gene2578;Dbxref=NCBI_GP:AEF84065.1;Name=AEF84065.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=AEF84065.1;transl_table=11 CP001843.1 Genbank gene 2846252 2846518 . + . ID=gene2579;Name=TREPR_1439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1439 CP001843.1 Genbank CDS 2846252 2846518 . + 0 ID=cds2461;Parent=gene2579;Dbxref=NCBI_GP:AEF87042.1;Name=AEF87042.1;Note=identified by match to protein family HMM PF06769%3B match to protein family HMM TIGR02116;gbkey=CDS;product=addiction module toxin%2C Txe/YoeB family;protein_id=AEF87042.1;transl_table=11 CP001843.1 Genbank gene 2846771 2852821 . + . ID=gene2580;Name=TREPR_1438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1438 CP001843.1 Genbank CDS 2846771 2852821 . + 0 ID=cds2462;Parent=gene2580;Dbxref=NCBI_GP:AEF86025.1;Name=AEF86025.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86025.1;transl_table=11 CP001843.1 Genbank gene 2852832 2854058 . + . ID=gene2581;Name=TREPR_1437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1437 CP001843.1 Genbank CDS 2852832 2854058 . + 0 ID=cds2463;Parent=gene2581;Dbxref=NCBI_GP:AEF85415.1;Name=AEF85415.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85415.1;transl_table=11 CP001843.1 Genbank gene 2854711 2854950 . + . ID=gene2582;Name=TREPR_1436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1436 CP001843.1 Genbank CDS 2854711 2854950 . + 0 ID=cds2464;Parent=gene2582;Dbxref=NCBI_GP:AEF84442.1;Name=AEF84442.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84442.1;transl_table=11 CP001843.1 Genbank pseudogene 2854958 2855353 . - . ID=gene2583;Name=TREPR_1435;Note=ISPsy18%2C transposase%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1435;pseudo=true CP001843.1 Genbank pseudogene 2855368 2856048 . - . ID=gene2584;Name=TREPR_1434;Note=transposase%2C Mutator family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00872;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1434;pseudo=true CP001843.1 Genbank gene 2856340 2856606 . - . ID=gene2585;Name=TREPR_1433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1433 CP001843.1 Genbank CDS 2856340 2856606 . - 0 ID=cds2465;Parent=gene2585;Dbxref=NCBI_GP:AEF85837.1;Name=AEF85837.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85837.1;transl_table=11 CP001843.1 Genbank gene 2856966 2857139 . - . ID=gene2586;Name=TREPR_1432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1432 CP001843.1 Genbank CDS 2856966 2857139 . - 0 ID=cds2466;Parent=gene2586;Dbxref=NCBI_GP:AEF85170.1;Name=AEF85170.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85170.1;transl_table=11 CP001843.1 Genbank gene 2857398 2857748 . + . ID=gene2587;Name=TREPR_1430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1430 CP001843.1 Genbank CDS 2857398 2857748 . + 0 ID=cds2467;Parent=gene2587;Dbxref=NCBI_GP:AEF86781.1;Name=AEF86781.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=helix-turn-helix domain protein;protein_id=AEF86781.1;transl_table=11 CP001843.1 Genbank gene 2857787 2858029 . - . ID=gene2588;Name=TREPR_1429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1429 CP001843.1 Genbank CDS 2857787 2858029 . - 0 ID=cds2468;Parent=gene2588;Dbxref=NCBI_GP:AEF84686.1;Name=AEF84686.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84686.1;transl_table=11 CP001843.1 Genbank gene 2858314 2858664 . + . ID=gene2589;Name=TREPR_1427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1427 CP001843.1 Genbank CDS 2858314 2858664 . + 0 ID=cds2469;Parent=gene2589;Dbxref=NCBI_GP:AEF86288.1;Name=AEF86288.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86288.1;transl_table=11 CP001843.1 Genbank gene 2858818 2860254 . + . ID=gene2590;Name=TREPR_1426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1426 CP001843.1 Genbank CDS 2858818 2860254 . + 0 ID=cds2470;Parent=gene2590;Dbxref=NCBI_GP:AEF84226.1;Name=AEF84226.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84226.1;transl_table=11 CP001843.1 Genbank gene 2860241 2861251 . + . ID=gene2591;Name=TREPR_1425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1425 CP001843.1 Genbank CDS 2860241 2861251 . + 0 ID=cds2471;Parent=gene2591;Dbxref=NCBI_GP:AEF85233.1;Name=AEF85233.1;Note=identified by match to protein family HMM TIGR01730;gbkey=CDS;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=AEF85233.1;transl_table=11 CP001843.1 Genbank pseudogene 2861251 2861931 . + . ID=gene2592;Name=TREPR_1424;Note=macrolide export ATP-binding/permease protein MacB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1424;pseudo=true CP001843.1 Genbank pseudogene 2861900 2863117 . + . ID=gene2593;Name=TREPR_1423;Note=macrolide export ATP-binding/permease protein MacB%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02687;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1423;pseudo=true CP001843.1 Genbank gene 2863129 2864361 . - . ID=gene2594;Name=TREPR_1422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1422 CP001843.1 Genbank CDS 2863129 2864361 . - 0 ID=cds2472;Parent=gene2594;Dbxref=NCBI_GP:AEF84762.1;Name=AEF84762.1;gbkey=CDS;product=putative transporter;protein_id=AEF84762.1;transl_table=11 CP001843.1 Genbank gene 2864418 2865020 . + . ID=gene2595;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=TREPR_1421 CP001843.1 Genbank CDS 2864418 2865020 . + 0 ID=cds2473;Parent=gene2595;Dbxref=NCBI_GP:AEF85282.1;Name=AEF85282.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01367;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=AEF85282.1;transl_table=11 CP001843.1 Genbank gene 2865028 2865732 . + . ID=gene2596;Name=TREPR_1420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1420 CP001843.1 Genbank CDS 2865028 2865732 . + 0 ID=cds2474;Parent=gene2596;Dbxref=NCBI_GP:AEF86056.1;Name=AEF86056.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;product=HAD-superfamily hydrolase;protein_id=AEF86056.1;transl_table=11 CP001843.1 Genbank gene 2865796 2866065 . + . ID=gene2597;Name=TREPR_1419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1419 CP001843.1 Genbank CDS 2865796 2866065 . + 0 ID=cds2475;Parent=gene2597;Dbxref=NCBI_GP:AEF83783.1;Name=AEF83783.1;Note=identified by match to protein family HMM PF04014;gbkey=CDS;product=PemI family protein;protein_id=AEF83783.1;transl_table=11 CP001843.1 Genbank gene 2866071 2866415 . + . ID=gene2598;Name=TREPR_1418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1418 CP001843.1 Genbank CDS 2866071 2866415 . + 0 ID=cds2476;Parent=gene2598;Dbxref=NCBI_GP:AEF86321.1;Name=AEF86321.1;Note=identified by match to protein family HMM PF02452;gbkey=CDS;product=PemK family protein;protein_id=AEF86321.1;transl_table=11 CP001843.1 Genbank pseudogene 2866507 2868945 . - . ID=gene2599;Name=TREPR_1417;Note=tetratricopeptide repeat domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07721;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1417;pseudo=true CP001843.1 Genbank gene 2868950 2870872 . - . ID=gene2600;Name=TREPR_1416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1416 CP001843.1 Genbank CDS 2868950 2870872 . - 0 ID=cds2477;Parent=gene2600;Dbxref=NCBI_GP:AEF84814.1;Name=AEF84814.1;Note=identified by match to protein family HMM PF07719;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF84814.1;transl_table=11 CP001843.1 Genbank gene 2871593 2871991 . - . ID=gene2601;Name=TREPR_1412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1412 CP001843.1 Genbank CDS 2871593 2871991 . - 0 ID=cds2478;Parent=gene2601;Dbxref=NCBI_GP:AEF83627.1;Name=AEF83627.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=putative PilT protein domain protein;protein_id=AEF83627.1;transl_table=11 CP001843.1 Genbank gene 2871988 2872233 . - . ID=gene2602;Name=TREPR_1411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1411 CP001843.1 Genbank CDS 2871988 2872233 . - 0 ID=cds2479;Parent=gene2602;Dbxref=NCBI_GP:AEF86493.1;Name=AEF86493.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86493.1;transl_table=11 CP001843.1 Genbank gene 2872249 2872416 . - . ID=gene2603;Name=TREPR_1410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1410 CP001843.1 Genbank CDS 2872249 2872416 . - 0 ID=cds2480;Parent=gene2603;Dbxref=NCBI_GP:AEF85846.1;Name=AEF85846.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85846.1;transl_table=11 CP001843.1 Genbank gene 2872435 2872662 . - . ID=gene2604;Name=TREPR_1409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1409 CP001843.1 Genbank CDS 2872435 2872662 . - 0 ID=cds2481;Parent=gene2604;Dbxref=NCBI_GP:AEF84675.1;Name=AEF84675.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84675.1;transl_table=11 CP001843.1 Genbank gene 2872672 2872947 . - . ID=gene2605;Name=TREPR_1408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1408 CP001843.1 Genbank CDS 2872672 2872947 . - 0 ID=cds2482;Parent=gene2605;Dbxref=NCBI_GP:AEF86657.1;Name=AEF86657.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86657.1;transl_table=11 CP001843.1 Genbank gene 2872987 2873133 . + . ID=gene2606;Name=TREPR_1407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1407 CP001843.1 Genbank CDS 2872987 2873133 . + 0 ID=cds2483;Parent=gene2606;Dbxref=NCBI_GP:AEF86249.1;Name=AEF86249.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86249.1;transl_table=11 CP001843.1 Genbank gene 2873541 2873840 . + . ID=gene2607;Name=higA_2;gbkey=Gene;gene=higA_2;gene_biotype=protein_coding;locus_tag=TREPR_1406 CP001843.1 Genbank CDS 2873541 2873840 . + 0 ID=cds2484;Parent=gene2607;Dbxref=NCBI_GP:AEF85550.1;Name=AEF85550.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM TIGR02607;gbkey=CDS;gene=higA_2;product=addiction module antidote protein%2C HigA family;protein_id=AEF85550.1;transl_table=11 CP001843.1 Genbank gene 2873920 2874096 . - . ID=gene2608;Name=TREPR_1405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1405 CP001843.1 Genbank CDS 2873920 2874096 . - 0 ID=cds2485;Parent=gene2608;Dbxref=NCBI_GP:AEF84372.1;Name=AEF84372.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84372.1;transl_table=11 CP001843.1 Genbank gene 2874261 2876795 . - . ID=gene2609;Name=TREPR_1404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1404 CP001843.1 Genbank CDS 2874261 2876795 . - 0 ID=cds2486;Parent=gene2609;Dbxref=NCBI_GP:AEF86206.1;Name=AEF86206.1;gbkey=CDS;product=putative extracellular nuclease;protein_id=AEF86206.1;transl_table=11 CP001843.1 Genbank pseudogene 2876811 2880701 . - . ID=gene2610;Name=TREPR_1403;Note=fibronectin type III domain protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00041;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1403;pseudo=true CP001843.1 Genbank gene 2880879 2881025 . - . ID=gene2611;Name=TREPR_1402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1402 CP001843.1 Genbank CDS 2880879 2881025 . - 0 ID=cds2487;Parent=gene2611;Dbxref=NCBI_GP:AEF85089.1;Name=AEF85089.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85089.1;transl_table=11 CP001843.1 Genbank gene 2881173 2881952 . + . ID=gene2612;Name=TREPR_1401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1401 CP001843.1 Genbank CDS 2881173 2881952 . + 0 ID=cds2488;Parent=gene2612;Dbxref=NCBI_GP:AEF86626.1;Name=AEF86626.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR01484;gbkey=CDS;product=Cof family protein;protein_id=AEF86626.1;transl_table=11 CP001843.1 Genbank gene 2882009 2896942 . - . ID=gene2613;Name=TREPR_1400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1400 CP001843.1 Genbank CDS 2882009 2896942 . - 0 ID=cds2489;Parent=gene2613;Dbxref=NCBI_GP:AEF86019.1;Name=AEF86019.1;Note=identified by match to protein family HMM PF00041%3B match to protein family HMM PF05345;gbkey=CDS;product=putative Ig domain family;protein_id=AEF86019.1;transl_table=11 CP001843.1 Genbank gene 2896946 2898487 . - . ID=gene2614;Name=TREPR_1399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1399 CP001843.1 Genbank CDS 2896946 2898487 . - 0 ID=cds2490;Parent=gene2614;Dbxref=NCBI_GP:AEF85239.1;Name=AEF85239.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85239.1;transl_table=11 CP001843.1 Genbank gene 2898642 2899076 . - . ID=gene2615;Name=TREPR_1398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1398 CP001843.1 Genbank CDS 2898642 2899076 . - 0 ID=cds2491;Parent=gene2615;Dbxref=NCBI_GP:AEF83945.1;Name=AEF83945.1;Note=identified by match to protein family HMM PF01478;gbkey=CDS;product=peptidase%2C A24 (type IV prepilin peptidase) family;protein_id=AEF83945.1;transl_table=11 CP001843.1 Genbank gene 2899201 2901258 . + . ID=gene2616;Name=TREPR_1397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1397 CP001843.1 Genbank CDS 2899201 2901258 . + 0 ID=cds2492;Parent=gene2616;Dbxref=NCBI_GP:AEF84028.1;Name=AEF84028.1;Note=identified by match to protein family HMM PF00263%3B match to protein family HMM PF03958;gbkey=CDS;product=bacterial type II and III secretion system protein;protein_id=AEF84028.1;transl_table=11 CP001843.1 Genbank gene 2901255 2902757 . + . ID=gene2617;Name=TREPR_1396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1396 CP001843.1 Genbank CDS 2901255 2902757 . + 0 ID=cds2493;Parent=gene2617;Dbxref=NCBI_GP:AEF85326.1;Name=AEF85326.1;Note=identified by match to protein family HMM PF00437;gbkey=CDS;product=general secretion pathway protein E (Type II traffic warden ATPase);protein_id=AEF85326.1;transl_table=11 CP001843.1 Genbank gene 2902757 2903812 . + . ID=gene2618;Name=TREPR_1395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1395 CP001843.1 Genbank CDS 2902757 2903812 . + 0 ID=cds2494;Parent=gene2618;Dbxref=NCBI_GP:AEF84681.1;Name=AEF84681.1;Note=identified by match to protein family HMM PF00482;gbkey=CDS;product=bacterial type II secretion system protein F domain protein;protein_id=AEF84681.1;transl_table=11 CP001843.1 Genbank gene 2903827 2904306 . + . ID=gene2619;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=TREPR_1394 CP001843.1 Genbank CDS 2903827 2904306 . + 0 ID=cds2495;Parent=gene2619;Dbxref=NCBI_GP:AEF84528.1;Name=AEF84528.1;Note=identified by match to protein family HMM PF08334%3B match to protein family HMM TIGR01710%3B match to protein family HMM TIGR02532;gbkey=CDS;gene=gspG;product=general secretion pathway protein G;protein_id=AEF84528.1;transl_table=11 CP001843.1 Genbank gene 2904278 2904505 . + . ID=gene2620;Name=TREPR_1393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1393 CP001843.1 Genbank CDS 2904278 2904505 . + 0 ID=cds2496;Parent=gene2620;Dbxref=NCBI_GP:AEF83533.1;Name=AEF83533.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83533.1;transl_table=11 CP001843.1 Genbank gene 2904495 2905004 . + . ID=gene2621;Name=TREPR_1392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1392 CP001843.1 Genbank CDS 2904495 2905004 . + 0 ID=cds2497;Parent=gene2621;Dbxref=NCBI_GP:AEF87015.1;Name=AEF87015.1;Note=identified by match to protein family HMM TIGR02532;gbkey=CDS;product=prepilin-type N- cleavage/methylation domain protein;protein_id=AEF87015.1;transl_table=11 CP001843.1 Genbank gene 2905016 2906020 . + . ID=gene2622;Name=TREPR_1391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1391 CP001843.1 Genbank CDS 2905016 2906020 . + 0 ID=cds2498;Parent=gene2622;Dbxref=NCBI_GP:AEF86040.1;Name=AEF86040.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86040.1;transl_table=11 CP001843.1 Genbank gene 2905998 2907152 . + . ID=gene2623;Name=TREPR_1390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1390 CP001843.1 Genbank CDS 2905998 2907152 . + 0 ID=cds2499;Parent=gene2623;Dbxref=NCBI_GP:AEF83748.1;Name=AEF83748.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83748.1;transl_table=11 CP001843.1 Genbank gene 2907172 2907660 . + . ID=gene2624;Name=TREPR_1389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1389 CP001843.1 Genbank CDS 2907172 2907660 . + 0 ID=cds2500;Parent=gene2624;Dbxref=NCBI_GP:AEF86262.1;Name=AEF86262.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86262.1;transl_table=11 CP001843.1 Genbank gene 2907650 2908222 . + . ID=gene2625;Name=TREPR_1388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1388 CP001843.1 Genbank CDS 2907650 2908222 . + 0 ID=cds2501;Parent=gene2625;Dbxref=NCBI_GP:AEF85688.1;Name=AEF85688.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85688.1;transl_table=11 CP001843.1 Genbank gene 2908225 2908890 . + . ID=gene2626;Name=TREPR_1387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1387 CP001843.1 Genbank CDS 2908225 2908890 . + 0 ID=cds2502;Parent=gene2626;Dbxref=NCBI_GP:AEF84955.1;Name=AEF84955.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84955.1;transl_table=11 CP001843.1 Genbank gene 2909286 2909903 . + . ID=gene2627;Name=TREPR_1386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1386 CP001843.1 Genbank CDS 2909286 2909903 . + 0 ID=cds2503;Parent=gene2627;Dbxref=NCBI_GP:AEF84148.1;Name=AEF84148.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84148.1;transl_table=11 CP001843.1 Genbank gene 2910082 2910456 . - . ID=gene2628;Name=TREPR_1385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1385 CP001843.1 Genbank CDS 2910082 2910456 . - 0 ID=cds2504;Parent=gene2628;Dbxref=NCBI_GP:AEF86688.1;Name=AEF86688.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86688.1;transl_table=11 CP001843.1 Genbank gene 2910453 2913731 . - . ID=gene2629;Name=TREPR_1384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1384 CP001843.1 Genbank CDS 2910453 2913731 . - 0 ID=cds2505;Parent=gene2629;Dbxref=NCBI_GP:AEF86007.1;Name=AEF86007.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;product=acriflavine resistance protein;protein_id=AEF86007.1;transl_table=11 CP001843.1 Genbank gene 2913743 2914702 . - . ID=gene2630;Name=TREPR_1383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1383 CP001843.1 Genbank CDS 2913743 2914702 . - 0 ID=cds2506;Parent=gene2630;Dbxref=NCBI_GP:AEF85508.1;Name=AEF85508.1;Note=identified by match to protein family HMM PF00364%3B match to protein family HMM TIGR01730;gbkey=CDS;product=putative membrane fusion protein;protein_id=AEF85508.1;transl_table=11 CP001843.1 Genbank gene 2914699 2916159 . - . ID=gene2631;Name=TREPR_1382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1382 CP001843.1 Genbank CDS 2914699 2916159 . - 0 ID=cds2507;Parent=gene2631;Dbxref=NCBI_GP:AEF84668.1;Name=AEF84668.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;product=outer membrane efflux protein;protein_id=AEF84668.1;transl_table=11 CP001843.1 Genbank gene 2916161 2916307 . - . ID=gene2632;Name=TREPR_1381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1381 CP001843.1 Genbank CDS 2916161 2916307 . - 0 ID=cds2508;Parent=gene2632;Dbxref=NCBI_GP:AEF83911.1;Name=AEF83911.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83911.1;transl_table=11 CP001843.1 Genbank gene 2916314 2917519 . - . ID=gene2633;Name=TREPR_1380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1380 CP001843.1 Genbank CDS 2916314 2917519 . - 0 ID=cds2509;Parent=gene2633;Dbxref=NCBI_GP:AEF86924.1;Name=AEF86924.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=transcriptional regulator%2C TetR family;protein_id=AEF86924.1;transl_table=11 CP001843.1 Genbank gene 2918380 2920212 . - . ID=gene2634;Name=TREPR_1379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1379 CP001843.1 Genbank CDS 2918380 2920212 . - 0 ID=cds2510;Parent=gene2634;Dbxref=NCBI_GP:AEF83659.1;Name=AEF83659.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=ABC-type multidrug/protein/lipid transport system%2C ATPase component;protein_id=AEF83659.1;transl_table=11 CP001843.1 Genbank gene 2920248 2921987 . - . ID=gene2635;Name=TREPR_1378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1378 CP001843.1 Genbank CDS 2920248 2921987 . - 0 ID=cds2511;Parent=gene2635;Dbxref=NCBI_GP:AEF84436.1;Name=AEF84436.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=ABC-type multidrug/protein/lipid transport system%2C ATPase component;protein_id=AEF84436.1;transl_table=11 CP001843.1 Genbank gene 2922163 2923764 . + . ID=gene2636;Name=TREPR_1377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1377 CP001843.1 Genbank CDS 2922163 2923764 . + 0 ID=cds2512;Parent=gene2636;Dbxref=NCBI_GP:AEF85587.1;Name=AEF85587.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=putative oligopeptide ABC transporter substrate-binding protein;protein_id=AEF85587.1;transl_table=11 CP001843.1 Genbank gene 2923880 2924812 . + . ID=gene2637;Name=TREPR_1376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1376 CP001843.1 Genbank CDS 2923880 2924812 . + 0 ID=cds2513;Parent=gene2637;Dbxref=NCBI_GP:AEF85934.1;Name=AEF85934.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=probable peptide ABC transporter permease protein y4tP;protein_id=AEF85934.1;transl_table=11 CP001843.1 Genbank gene 2924814 2925713 . + . ID=gene2638;Name=TREPR_1375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1375 CP001843.1 Genbank CDS 2924814 2925713 . + 0 ID=cds2514;Parent=gene2638;Dbxref=NCBI_GP:AEF86664.1;Name=AEF86664.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=dipeptide transport system permease protein DppC;protein_id=AEF86664.1;transl_table=11 CP001843.1 Genbank gene 2925718 2926713 . + . ID=gene2639;Name=TREPR_1374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1374 CP001843.1 Genbank CDS 2925718 2926713 . + 0 ID=cds2515;Parent=gene2639;Dbxref=NCBI_GP:AEF84395.1;Name=AEF84395.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppD;protein_id=AEF84395.1;transl_table=11 CP001843.1 Genbank gene 2926710 2927717 . + . ID=gene2640;Name=TREPR_1373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1373 CP001843.1 Genbank CDS 2926710 2927717 . + 0 ID=cds2516;Parent=gene2640;Dbxref=NCBI_GP:AEF85151.1;Name=AEF85151.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF85151.1;transl_table=11 CP001843.1 Genbank gene 2927767 2928831 . + . ID=gene2641;Name=TREPR_1372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1372 CP001843.1 Genbank CDS 2927767 2928831 . + 0 ID=cds2517;Parent=gene2641;Dbxref=NCBI_GP:AEF85421.1;Name=AEF85421.1;Note=identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746;gbkey=CDS;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=AEF85421.1;transl_table=11 CP001843.1 Genbank gene 2928844 2930211 . + . ID=gene2642;Name=TREPR_1371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1371 CP001843.1 Genbank CDS 2928844 2930211 . + 0 ID=cds2518;Parent=gene2642;Dbxref=NCBI_GP:AEF86596.1;Name=AEF86596.1;Note=identified by match to protein family HMM PF01841;gbkey=CDS;product=transglutaminase domain protein;protein_id=AEF86596.1;transl_table=11 CP001843.1 Genbank gene 2930287 2930823 . - . ID=gene2643;Name=TREPR_1370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1370 CP001843.1 Genbank CDS 2930287 2930823 . - 0 ID=cds2519;Parent=gene2643;Dbxref=NCBI_GP:AEF86491.1;Name=AEF86491.1;Note=identified by match to protein family HMM PF01923%3B match to protein family HMM TIGR00636;gbkey=CDS;product=ATP:cob(I)alamin adenosyltransferase;protein_id=AEF86491.1;transl_table=11 CP001843.1 Genbank gene 2930832 2932097 . - . ID=gene2644;Name=TREPR_1369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1369 CP001843.1 Genbank CDS 2930832 2932097 . - 0 ID=cds2520;Parent=gene2644;Dbxref=NCBI_GP:AEF85707.1;Name=AEF85707.1;Note=identified by match to protein family HMM PF02272%3B match to protein family HMM PF07973;gbkey=CDS;product=threonyl/alanyl tRNA synthetase%2C SAD;protein_id=AEF85707.1;transl_table=11 CP001843.1 Genbank gene 2932156 2932869 . - . ID=gene2645;Name=rluD_2;gbkey=Gene;gene=rluD_2;gene_biotype=protein_coding;locus_tag=TREPR_1368 CP001843.1 Genbank CDS 2932156 2932869 . - 0 ID=cds2521;Parent=gene2645;Dbxref=NCBI_GP:AEF84870.1;Name=AEF84870.1;Note=identified by match to protein family HMM PF00849;gbkey=CDS;gene=rluD_2;product=ribosomal large subunit pseudouridine synthase D;protein_id=AEF84870.1;transl_table=11 CP001843.1 Genbank gene 2932876 2934120 . - . ID=gene2646;Name=TREPR_1367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1367 CP001843.1 Genbank CDS 2932876 2934120 . - 0 ID=cds2522;Parent=gene2646;Dbxref=NCBI_GP:AEF84144.1;Name=AEF84144.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84144.1;transl_table=11 CP001843.1 Genbank gene 2934269 2935216 . + . ID=gene2647;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=TREPR_1366 CP001843.1 Genbank CDS 2934269 2935216 . + 0 ID=cds2523;Parent=gene2647;Dbxref=NCBI_GP:AEF86831.1;Name=AEF86831.1;Note=identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658;gbkey=CDS;gene=argF;product=ornithine carbamoyltransferase;protein_id=AEF86831.1;transl_table=11 CP001843.1 Genbank gene 2935246 2936379 . - . ID=gene2648;Name=TREPR_1365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1365 CP001843.1 Genbank CDS 2935246 2936379 . - 0 ID=cds2524;Parent=gene2648;Dbxref=NCBI_GP:AEF86084.1;Name=AEF86084.1;Note=identified by match to protein family HMM PF01168;gbkey=CDS;product=alanine racemase%2C N- domain protein;protein_id=AEF86084.1;transl_table=11 CP001843.1 Genbank gene 2936631 2937689 . + . ID=gene2649;Name=TREPR_1364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1364 CP001843.1 Genbank CDS 2936631 2937689 . + 0 ID=cds2525;Parent=gene2649;Dbxref=NCBI_GP:AEF85071.1;Name=AEF85071.1;gbkey=CDS;product=dihydrodipicolinate reductase;protein_id=AEF85071.1;transl_table=11 CP001843.1 Genbank gene 2937698 2937997 . + . ID=gene2650;Name=TREPR_1363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1363 CP001843.1 Genbank CDS 2937698 2937997 . + 0 ID=cds2526;Parent=gene2650;Dbxref=NCBI_GP:AEF84390.1;Name=AEF84390.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84390.1;transl_table=11 CP001843.1 Genbank gene 2938048 2939403 . + . ID=gene2651;Name=TREPR_1362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1362 CP001843.1 Genbank CDS 2938048 2939403 . + 0 ID=cds2527;Parent=gene2651;Dbxref=NCBI_GP:AEF86702.1;Name=AEF86702.1;Note=identified by match to protein family HMM PF00291;gbkey=CDS;product=pyridoxal-5'-phosphate-dependent protein beta subunit;protein_id=AEF86702.1;transl_table=11 CP001843.1 Genbank gene 2939413 2939769 . + . ID=gene2652;Name=TREPR_1361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1361 CP001843.1 Genbank CDS 2939413 2939769 . + 0 ID=cds2528;Parent=gene2652;Dbxref=NCBI_GP:AEF85919.1;Name=AEF85919.1;gbkey=CDS;product=D-ornithine aminomutase S component;protein_id=AEF85919.1;transl_table=11 CP001843.1 Genbank gene 2939782 2942001 . + . ID=gene2653;Name=TREPR_1360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1360 CP001843.1 Genbank CDS 2939782 2942001 . + 0 ID=cds2529;Parent=gene2653;Dbxref=NCBI_GP:AEF84123.1;Name=AEF84123.1;Note=identified by match to protein family HMM PF02310%3B match to protein family HMM PF09043;gbkey=CDS;product=D-ornithine aminomutase E component;protein_id=AEF84123.1;transl_table=11 CP001843.1 Genbank gene 2942015 2943409 . + . ID=gene2654;Name=TREPR_1359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1359 CP001843.1 Genbank CDS 2942015 2943409 . + 0 ID=cds2530;Parent=gene2654;Dbxref=NCBI_GP:AEF85114.1;Name=AEF85114.1;Note=identified by match to protein family HMM TIGR01319;gbkey=CDS;product=MutL protein;protein_id=AEF85114.1;transl_table=11 CP001843.1 Genbank gene 2943591 2945042 . + . ID=gene2655;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=TREPR_1358 CP001843.1 Genbank CDS 2943591 2945042 . + 0 ID=cds2531;Parent=gene2655;Dbxref=NCBI_GP:AEF83902.1;Name=AEF83902.1;Note=identified by match to protein family HMM PF03553%3B match to protein family HMM TIGR00931;gbkey=CDS;gene=nhaC;product=Na+/H+ antiporter NhaC;protein_id=AEF83902.1;transl_table=11 CP001843.1 Genbank gene 2945208 2946779 . + . ID=gene2656;Name=TREPR_1357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1357 CP001843.1 Genbank CDS 2945208 2946779 . + 0 ID=cds2532;Parent=gene2656;Dbxref=NCBI_GP:AEF86474.1;Name=AEF86474.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872;gbkey=CDS;product=protein UshA;protein_id=AEF86474.1;transl_table=11 CP001843.1 Genbank gene 2946789 2947562 . + . ID=gene2657;Name=TREPR_1356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1356 CP001843.1 Genbank CDS 2946789 2947562 . + 0 ID=cds2533;Parent=gene2657;Dbxref=NCBI_GP:AEF86002.1;Name=AEF86002.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR01484;gbkey=CDS;product=HAD-superfamily hydrolase%2C subfamily IIB;protein_id=AEF86002.1;transl_table=11 CP001843.1 Genbank gene 2947694 2948527 . + . ID=gene2658;Name=TREPR_1355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1355 CP001843.1 Genbank CDS 2947694 2948527 . + 0 ID=cds2534;Parent=gene2658;Dbxref=NCBI_GP:AEF84953.1;Name=AEF84953.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=amino acid ABC-transporter%2C periplasmic amino acid-binding protein;protein_id=AEF84953.1;transl_table=11 CP001843.1 Genbank gene 2948546 2949262 . + . ID=gene2659;Name=TREPR_1354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1354 CP001843.1 Genbank CDS 2948546 2949262 . + 0 ID=cds2535;Parent=gene2659;Dbxref=NCBI_GP:AEF83596.1;Name=AEF83596.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=L-cystine transport system permease protein TcyB;protein_id=AEF83596.1;transl_table=11 CP001843.1 Genbank gene 2949259 2950029 . + . ID=gene2660;Name=TREPR_1353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1353 CP001843.1 Genbank CDS 2949259 2950029 . + 0 ID=cds2536;Parent=gene2660;Dbxref=NCBI_GP:AEF86415.1;Name=AEF86415.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=L-cystine import ATP-binding protein TcyN;protein_id=AEF86415.1;transl_table=11 CP001843.1 Genbank gene 2950075 2951688 . + . ID=gene2661;Name=TREPR_1352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1352 CP001843.1 Genbank CDS 2950075 2951688 . + 0 ID=cds2537;Parent=gene2661;Dbxref=NCBI_GP:AEF86887.1;Name=AEF86887.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86887.1;transl_table=11 CP001843.1 Genbank gene 2951817 2952869 . - . ID=gene2662;Name=TREPR_1351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1351 CP001843.1 Genbank CDS 2951817 2952869 . - 0 ID=cds2538;Parent=gene2662;Dbxref=NCBI_GP:AEF86152.1;Name=AEF86152.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=transcriptional regulator;protein_id=AEF86152.1;transl_table=11 CP001843.1 Genbank gene 2952925 2954661 . + . ID=gene2663;Name=TREPR_1350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1350 CP001843.1 Genbank CDS 2952925 2954661 . + 0 ID=cds2539;Parent=gene2663;Dbxref=NCBI_GP:AEF84845.1;Name=AEF84845.1;Note=identified by match to protein family HMM PF00795%3B match to protein family HMM PF02540%3B match to protein family HMM TIGR00552;gbkey=CDS;product=NAD(+) synthase (glutamine-hydrolyzing);protein_id=AEF84845.1;transl_table=11 CP001843.1 Genbank gene 2954958 2956145 . + . ID=gene2664;Name=TREPR_1348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1348 CP001843.1 Genbank CDS 2954958 2956145 . + 0 ID=cds2540;Parent=gene2664;Dbxref=NCBI_GP:AEF86903.1;Name=AEF86903.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86903.1;transl_table=11 CP001843.1 Genbank gene 2956149 2957771 . + . ID=gene2665;Name=TREPR_1347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1347 CP001843.1 Genbank CDS 2956149 2957771 . + 0 ID=cds2541;Parent=gene2665;Dbxref=NCBI_GP:AEF84356.1;Name=AEF84356.1;Note=identified by match to protein family HMM PF07523;gbkey=CDS;product=putative pectate lyase 9A;protein_id=AEF84356.1;transl_table=11 CP001843.1 Genbank gene 2957781 2960996 . + . ID=gene2666;Name=TREPR_1346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1346 CP001843.1 Genbank CDS 2957781 2960996 . + 0 ID=cds2542;Parent=gene2666;Dbxref=NCBI_GP:AEF84780.1;Name=AEF84780.1;gbkey=CDS;product=probable extracellular nuclease;protein_id=AEF84780.1;transl_table=11 CP001843.1 Genbank gene 2961047 2961274 . + . ID=gene2667;Name=TREPR_1345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1345 CP001843.1 Genbank CDS 2961047 2961274 . + 0 ID=cds2543;Parent=gene2667;Dbxref=NCBI_GP:AEF85387.1;Name=AEF85387.1;gbkey=CDS;product=NAD+ synthetase;protein_id=AEF85387.1;transl_table=11 CP001843.1 Genbank gene 2961721 2963562 . + . ID=gene2668;Name=TREPR_1343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1343 CP001843.1 Genbank CDS 2961721 2963562 . + 0 ID=cds2544;Parent=gene2668;Dbxref=NCBI_GP:AEF86707.1;Name=AEF86707.1;Note=identified by match to protein family HMM PF02368;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86707.1;transl_table=11 CP001843.1 Genbank gene 2963577 2965778 . + . ID=gene2669;Name=TREPR_1342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1342 CP001843.1 Genbank CDS 2963577 2965778 . + 0 ID=cds2545;Parent=gene2669;Dbxref=NCBI_GP:AEF84393.1;Name=AEF84393.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84393.1;transl_table=11 CP001843.1 Genbank gene 2965895 2966719 . + . ID=gene2670;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=TREPR_1340 CP001843.1 Genbank CDS 2965895 2966719 . + 0 ID=cds2546;Parent=gene2670;Dbxref=NCBI_GP:AEF83933.1;Name=AEF83933.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;gene=lipB;product=lipoate-protein ligase B;protein_id=AEF83933.1;transl_table=11 CP001843.1 Genbank gene 2966776 2968131 . + . ID=gene2671;Name=TREPR_1339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1339 CP001843.1 Genbank CDS 2966776 2968131 . + 0 ID=cds2547;Parent=gene2671;Dbxref=NCBI_GP:AEF84644.1;Name=AEF84644.1;Note=identified by match to protein family HMM PF00349%3B match to protein family HMM PF03727;gbkey=CDS;product=hexokinase;protein_id=AEF84644.1;transl_table=11 CP001843.1 Genbank gene 2968291 2969916 . + . ID=gene2672;Name=TREPR_1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1338 CP001843.1 Genbank CDS 2968291 2969916 . + 0 ID=cds2548;Parent=gene2672;Dbxref=NCBI_GP:AEF84061.1;Name=AEF84061.1;Note=identified by match to protein family HMM PF00135;gbkey=CDS;product=para-nitroBenzyl esterase (pnb carboxy-esterase)(intracellular esterase b) (pnbce);protein_id=AEF84061.1;transl_table=11 CP001843.1 Genbank gene 2970016 2971620 . + . ID=gene2673;Name=TREPR_1337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1337 CP001843.1 Genbank CDS 2970016 2971620 . + 0 ID=cds2549;Parent=gene2673;Dbxref=NCBI_GP:AEF85072.1;Name=AEF85072.1;Note=identified by match to protein family HMM PF00135;gbkey=CDS;product=para-nitroBenzyl esterase (pnb carboxy-esterase)(intracellular esterase b) (pnbce);protein_id=AEF85072.1;transl_table=11 CP001843.1 Genbank pseudogene 2971693 2972463 . - . ID=gene2674;Name=TREPR_1336;Note=OppF%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1336;pseudo=true CP001843.1 Genbank pseudogene 2972466 2973332 . - . ID=gene2675;Name=TREPR_1335;Note=ABC transporter%2C ATP-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1335;pseudo=true CP001843.1 Genbank gene 2973329 2974159 . - . ID=gene2676;Name=TREPR_1334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1334 CP001843.1 Genbank CDS 2973329 2974159 . - 0 ID=cds2550;Parent=gene2676;Dbxref=NCBI_GP:AEF86228.1;Name=AEF86228.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF86228.1;transl_table=11 CP001843.1 Genbank gene 2974169 2975131 . - . ID=gene2677;Name=TREPR_1333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1333 CP001843.1 Genbank CDS 2974169 2975131 . - 0 ID=cds2551;Parent=gene2677;Dbxref=NCBI_GP:AEF83918.1;Name=AEF83918.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF83918.1;transl_table=11 CP001843.1 Genbank gene 2975192 2976712 . - . ID=gene2678;Name=TREPR_1332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1332 CP001843.1 Genbank CDS 2975192 2976712 . - 0 ID=cds2552;Parent=gene2678;Dbxref=NCBI_GP:AEF85880.1;Name=AEF85880.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=extracellular solute-binding protein family 5;protein_id=AEF85880.1;transl_table=11 CP001843.1 Genbank gene 2976873 2978054 . - . ID=gene2679;Name=TREPR_1331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1331 CP001843.1 Genbank CDS 2976873 2978054 . - 0 ID=cds2553;Parent=gene2679;Dbxref=NCBI_GP:AEF86618.1;Name=AEF86618.1;Note=identified by match to protein family HMM PF07907;gbkey=CDS;product=YibE/F family protein;protein_id=AEF86618.1;transl_table=11 CP001843.1 Genbank gene 2978061 2979677 . - . ID=gene2680;Name=TREPR_1330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1330 CP001843.1 Genbank CDS 2978061 2979677 . - 0 ID=cds2554;Parent=gene2680;Dbxref=NCBI_GP:AEF84582.1;Name=AEF84582.1;Note=identified by match to protein family HMM PF00245;gbkey=CDS;product=alkaline phosphatase;protein_id=AEF84582.1;transl_table=11 CP001843.1 Genbank gene 2979773 2981995 . - . ID=gene2681;Name=TREPR_1329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1329 CP001843.1 Genbank CDS 2979773 2981995 . - 0 ID=cds2555;Parent=gene2681;Dbxref=NCBI_GP:AEF85136.1;Name=AEF85136.1;Note=identified by match to protein family HMM PF00933%3B match to protein family HMM PF01915;gbkey=CDS;product=periplasmic beta-glucosidase/beta-xylosidase;protein_id=AEF85136.1;transl_table=11 CP001843.1 Genbank gene 2982094 2984595 . - . ID=gene2682;Name=TREPR_1328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1328 CP001843.1 Genbank CDS 2982094 2984595 . - 0 ID=cds2556;Parent=gene2682;Dbxref=NCBI_GP:AEF86905.1;Name=AEF86905.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF01229%3B match to protein family HMM PF02311%3B match to protein family HMM PF05899%3B match to protein family HMM PF07883;gbkey=CDS;product=beta-1%2C4-xylosidase with transcriptional regulator of AraC/XylS family;protein_id=AEF86905.1;transl_table=11 CP001843.1 Genbank gene 2984646 2984771 . + . ID=gene2683;Name=TREPR_1327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1327 CP001843.1 Genbank CDS 2984646 2984771 . + 0 ID=cds2557;Parent=gene2683;Dbxref=NCBI_GP:AEF86082.1;Name=AEF86082.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86082.1;transl_table=11 CP001843.1 Genbank gene 2984784 2985710 . - . ID=gene2684;Name=TREPR_1326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1326 CP001843.1 Genbank CDS 2984784 2985710 . - 0 ID=cds2558;Parent=gene2684;Dbxref=NCBI_GP:AEF84834.1;Name=AEF84834.1;Note=identified by match to protein family HMM PF00903%3B match to protein family HMM TIGR03211;gbkey=CDS;product=catechol 2%2C3 dioxygenase;protein_id=AEF84834.1;transl_table=11 CP001843.1 Genbank gene 2985738 2986022 . - . ID=gene2685;Name=TREPR_1325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1325 CP001843.1 Genbank CDS 2985738 2986022 . - 0 ID=cds2559;Parent=gene2685;Dbxref=NCBI_GP:AEF84084.1;Name=AEF84084.1;Note=identified by match to protein family HMM PF00111;gbkey=CDS;product=SalB;protein_id=AEF84084.1;transl_table=11 CP001843.1 Genbank gene 2986040 2987047 . - . ID=gene2686;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=TREPR_1324 CP001843.1 Genbank CDS 2986040 2987047 . - 0 ID=cds2560;Parent=gene2686;Dbxref=NCBI_GP:AEF85149.1;Name=AEF85149.1;Note=identified by match to protein family HMM PF00682%3B match to protein family HMM PF07836%3B match to protein family HMM TIGR03217;gbkey=CDS;gene=dmpG;product=4-hydroxy-2-oxovalerate aldolase;protein_id=AEF85149.1;transl_table=11 CP001843.1 Genbank gene 2987049 2987915 . - . ID=gene2687;Name=TREPR_1323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1323 CP001843.1 Genbank CDS 2987049 2987915 . - 0 ID=cds2561;Parent=gene2687;Dbxref=NCBI_GP:AEF83715.1;Name=AEF83715.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF09290%3B match to protein family HMM TIGR03215;gbkey=CDS;product=acetaldehyde dehydrogenase (acetylating);protein_id=AEF83715.1;transl_table=11 CP001843.1 Genbank gene 2987986 2988768 . - . ID=gene2688;Name=TREPR_1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1322 CP001843.1 Genbank CDS 2987986 2988768 . - 0 ID=cds2562;Parent=gene2688;Dbxref=NCBI_GP:AEF86234.1;Name=AEF86234.1;Note=identified by match to protein family HMM PF01689;gbkey=CDS;product=2-keto-4-pentenoate hydratase (2-hydroxypentadienoic acidhydratase);protein_id=AEF86234.1;transl_table=11 CP001843.1 Genbank gene 2988772 2989596 . - . ID=gene2689;Name=TREPR_1321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1321 CP001843.1 Genbank CDS 2988772 2989596 . - 0 ID=cds2563;Parent=gene2689;Dbxref=NCBI_GP:AEF85681.1;Name=AEF85681.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=2-hydroxy-6-oxo-6-phenylhexa-2%2C4-dienoate hydrolase;protein_id=AEF85681.1;transl_table=11 CP001843.1 Genbank gene 2990002 2990499 . + . ID=gene2690;Name=TREPR_1318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1318 CP001843.1 Genbank CDS 2990002 2990499 . + 0 ID=cds2564;Parent=gene2690;Dbxref=NCBI_GP:AEF86488.1;Name=AEF86488.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86488.1;transl_table=11 CP001843.1 Genbank gene 2990588 2991319 . - . ID=gene2691;Name=TREPR_1317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1317 CP001843.1 Genbank CDS 2990588 2991319 . - 0 ID=cds2565;Parent=gene2691;Dbxref=NCBI_GP:AEF85644.1;Name=AEF85644.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;product=putative GntR domain protein;protein_id=AEF85644.1;transl_table=11 CP001843.1 Genbank gene 2991478 2992296 . + . ID=gene2692;Name=TREPR_1316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1316 CP001843.1 Genbank CDS 2991478 2992296 . + 0 ID=cds2566;Parent=gene2692;Dbxref=NCBI_GP:AEF85819.1;Name=AEF85819.1;Note=identified by match to protein family HMM PF01261;gbkey=CDS;product=AP endonuclease%2C family 2;protein_id=AEF85819.1;transl_table=11 CP001843.1 Genbank gene 2992327 2993397 . + . ID=gene2693;Name=TREPR_1315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1315 CP001843.1 Genbank CDS 2992327 2993397 . + 0 ID=cds2567;Parent=gene2693;Dbxref=NCBI_GP:AEF85002.1;Name=AEF85002.1;Note=identified by match to protein family HMM PF03480%3B match to protein family HMM TIGR00787;gbkey=CDS;product=putative C4-dicarboxylate-binding protein;protein_id=AEF85002.1;transl_table=11 CP001843.1 Genbank gene 2993426 2994028 . + . ID=gene2694;Name=TREPR_1314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1314 CP001843.1 Genbank CDS 2993426 2994028 . + 0 ID=cds2568;Parent=gene2694;Dbxref=NCBI_GP:AEF84281.1;Name=AEF84281.1;Note=identified by match to protein family HMM PF04290;gbkey=CDS;product=putative tripartite ATP-independent periplasmic transporter%2C DctQ component;protein_id=AEF84281.1;transl_table=11 CP001843.1 Genbank gene 2994041 2995342 . + . ID=gene2695;Name=TREPR_1313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1313 CP001843.1 Genbank CDS 2994041 2995342 . + 0 ID=cds2569;Parent=gene2695;Dbxref=NCBI_GP:AEF87002.1;Name=AEF87002.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;product=trap dicarboxylate transporter%2C dctm subunit;protein_id=AEF87002.1;transl_table=11 CP001843.1 Genbank gene 2995369 2996586 . + . ID=gene2696;Name=TREPR_1312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1312 CP001843.1 Genbank CDS 2995369 2996586 . + 0 ID=cds2570;Parent=gene2696;Dbxref=NCBI_GP:AEF85608.1;Name=AEF85608.1;gbkey=CDS;product=putative methyltransferase CmuC;protein_id=AEF85608.1;transl_table=11 CP001843.1 Genbank gene 2996637 2997473 . + . ID=gene2697;Name=TREPR_1311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1311 CP001843.1 Genbank CDS 2996637 2997473 . + 0 ID=cds2571;Parent=gene2697;Dbxref=NCBI_GP:AEF84419.1;Name=AEF84419.1;Note=identified by match to protein family HMM PF00456;gbkey=CDS;product=transketolase;protein_id=AEF84419.1;transl_table=11 CP001843.1 Genbank gene 2997476 2998411 . + . ID=gene2698;Name=TREPR_1310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1310 CP001843.1 Genbank CDS 2997476 2998411 . + 0 ID=cds2572;Parent=gene2698;Dbxref=NCBI_GP:AEF84107.1;Name=AEF84107.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;product=transketolase C- section;protein_id=AEF84107.1;transl_table=11 CP001843.1 Genbank gene 2998425 2999306 . + . ID=gene2699;Name=TREPR_1309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1309 CP001843.1 Genbank CDS 2998425 2999306 . + 0 ID=cds2573;Parent=gene2699;Dbxref=NCBI_GP:AEF87035.1;Name=AEF87035.1;Note=identified by match to protein family HMM PF03446%3B match to protein family HMM TIGR01505;gbkey=CDS;product=2-hydroxy-3-oxopropionate reductase;protein_id=AEF87035.1;transl_table=11 CP001843.1 Genbank gene 2999469 3000914 . - . ID=gene2700;Name=TREPR_1308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1308 CP001843.1 Genbank CDS 2999469 3000914 . - 0 ID=cds2574;Parent=gene2700;Dbxref=NCBI_GP:AEF86648.1;Name=AEF86648.1;Note=identified by match to protein family HMM PF01874%3B match to protein family HMM PF03802%3B match to protein family HMM TIGR03124;gbkey=CDS;product=2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase);protein_id=AEF86648.1;transl_table=11 CP001843.1 Genbank gene 3000952 3001524 . - . ID=gene2701;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=TREPR_1307 CP001843.1 Genbank CDS 3000952 3001524 . - 0 ID=cds2575;Parent=gene2701;Dbxref=NCBI_GP:AEF85903.1;Name=AEF85903.1;Note=identified by match to protein family HMM PF05683%3B match to protein family HMM TIGR00723;gbkey=CDS;gene=fumB;product=fumarate hydratase%2C class I;protein_id=AEF85903.1;transl_table=11 CP001843.1 Genbank gene 3001524 3002363 . - . ID=gene2702;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=TREPR_1306 CP001843.1 Genbank CDS 3001524 3002363 . - 0 ID=cds2576;Parent=gene2702;Dbxref=NCBI_GP:AEF84673.1;Name=AEF84673.1;Note=identified by match to protein family HMM PF05681%3B match to protein family HMM TIGR00722;gbkey=CDS;gene=ttdA;product=fumarate hydratase;protein_id=AEF84673.1;transl_table=11 CP001843.1 Genbank gene 3002418 3003353 . - . ID=gene2703;Name=TREPR_1305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1305 CP001843.1 Genbank CDS 3002418 3003353 . - 0 ID=cds2577;Parent=gene2703;Dbxref=NCBI_GP:AEF83920.1;Name=AEF83920.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83920.1;transl_table=11 CP001843.1 Genbank gene 3003412 3004662 . - . ID=gene2704;Name=TREPR_1304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1304 CP001843.1 Genbank CDS 3003412 3004662 . - 0 ID=cds2578;Parent=gene2704;Dbxref=NCBI_GP:AEF85276.1;Name=AEF85276.1;Note=identified by match to protein family HMM PF05034%3B match to protein family HMM PF07476%3B match to protein family HMM TIGR01502;gbkey=CDS;product=methylaspartate ammonia-lyase;protein_id=AEF85276.1;transl_table=11 CP001843.1 Genbank gene 3004672 3006120 . - . ID=gene2705;Name=TREPR_1303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1303 CP001843.1 Genbank CDS 3004672 3006120 . - 0 ID=cds2579;Parent=gene2705;Dbxref=NCBI_GP:AEF84511.1;Name=AEF84511.1;Note=identified by match to protein family HMM PF06368%3B match to protein family HMM TIGR01503;gbkey=CDS;product=methylaspartate mutase%2C E subunit;protein_id=AEF84511.1;transl_table=11 CP001843.1 Genbank gene 3006104 3007498 . - . ID=gene2706;Name=TREPR_1302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1302 CP001843.1 Genbank CDS 3006104 3007498 . - 0 ID=cds2580;Parent=gene2706;Dbxref=NCBI_GP:AEF86757.1;Name=AEF86757.1;Note=identified by match to protein family HMM TIGR01319;gbkey=CDS;product=MutL protein;protein_id=AEF86757.1;transl_table=11 CP001843.1 Genbank gene 3007504 3007920 . - . ID=gene2707;Name=mamA;gbkey=Gene;gene=mamA;gene_biotype=protein_coding;locus_tag=TREPR_1301 CP001843.1 Genbank CDS 3007504 3007920 . - 0 ID=cds2581;Parent=gene2707;Dbxref=NCBI_GP:AEF85790.1;Name=AEF85790.1;Note=identified by match to protein family HMM PF02310%3B match to protein family HMM TIGR01501;gbkey=CDS;gene=mamA;product=methylaspartate mutase%2C S subunit;protein_id=AEF85790.1;transl_table=11 CP001843.1 Genbank gene 3008198 3009643 . + . ID=gene2708;Name=TREPR_1299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1299 CP001843.1 Genbank CDS 3008198 3009643 . + 0 ID=cds2582;Parent=gene2708;Dbxref=NCBI_GP:AEF85786.1;Name=AEF85786.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;product=aminobenzoyl-glutamate utilization protein B;protein_id=AEF85786.1;transl_table=11 CP001843.1 Genbank gene 3009647 3010636 . - . ID=gene2709;Name=TREPR_1298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1298 CP001843.1 Genbank CDS 3009647 3010636 . - 0 ID=cds2583;Parent=gene2709;Dbxref=NCBI_GP:AEF83903.1;Name=AEF83903.1;Note=identified by match to protein family HMM PF00392;gbkey=CDS;product=transcriptional regulator%2C GntR family protein;protein_id=AEF83903.1;transl_table=11 CP001843.1 Genbank gene 3011133 3012992 . + . ID=gene2710;Name=TREPR_1297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1297 CP001843.1 Genbank CDS 3011133 3012992 . + 0 ID=cds2584;Parent=gene2710;Dbxref=NCBI_GP:AEF84672.1;Name=AEF84672.1;gbkey=CDS;product=putative von Willebrand factor%2C type A;protein_id=AEF84672.1;transl_table=11 CP001843.1 Genbank gene 3013004 3015493 . + . ID=gene2711;Name=TREPR_1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1296 CP001843.1 Genbank CDS 3013004 3015493 . + 0 ID=cds2585;Parent=gene2711;Dbxref=NCBI_GP:AEF85455.1;Name=AEF85455.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85455.1;transl_table=11 CP001843.1 Genbank gene 3015505 3017775 . + . ID=gene2712;Name=TREPR_1295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1295 CP001843.1 Genbank CDS 3015505 3017775 . + 0 ID=cds2586;Parent=gene2712;Dbxref=NCBI_GP:AEF85449.1;Name=AEF85449.1;gbkey=CDS;product=putative von Willebrand factor%2C type A;protein_id=AEF85449.1;transl_table=11 CP001843.1 Genbank gene 3018215 3018919 . + . ID=gene2713;Name=TREPR_1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1293 CP001843.1 Genbank CDS 3018215 3018919 . + 0 ID=cds2587;Parent=gene2713;Dbxref=NCBI_GP:AEF83728.1;Name=AEF83728.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83728.1;transl_table=11 CP001843.1 Genbank gene 3018879 3019232 . + . ID=gene2714;Name=TREPR_1292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1292 CP001843.1 Genbank CDS 3018879 3019232 . + 0 ID=cds2588;Parent=gene2714;Dbxref=NCBI_GP:AEF84451.1;Name=AEF84451.1;gbkey=CDS;product=meiotic expression up-regulated protein 1/2;protein_id=AEF84451.1;transl_table=11 CP001843.1 Genbank gene 3019425 3022697 . + . ID=gene2715;Name=TREPR_1291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1291 CP001843.1 Genbank CDS 3019425 3022697 . + 0 ID=cds2589;Parent=gene2715;Dbxref=NCBI_GP:AEF85034.1;Name=AEF85034.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM PF04851;gbkey=CDS;product=helicase domain/SNF2 family domain protein;protein_id=AEF85034.1;transl_table=11 CP001843.1 Genbank gene 3022690 3024843 . + . ID=gene2716;Name=TREPR_1290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1290 CP001843.1 Genbank CDS 3022690 3024843 . + 0 ID=cds2590;Parent=gene2716;Dbxref=NCBI_GP:AEF84057.1;Name=AEF84057.1;Note=identified by match to protein family HMM PF08238;gbkey=CDS;product=Sel1 domain protein;protein_id=AEF84057.1;transl_table=11 CP001843.1 Genbank gene 3024882 3025970 . - . ID=gene2717;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=TREPR_1289 CP001843.1 Genbank CDS 3024882 3025970 . - 0 ID=cds2591;Parent=gene2717;Dbxref=NCBI_GP:AEF84236.1;Name=AEF84236.1;Note=identified by match to protein family HMM PF00583%3B match to protein family HMM PF08218%3B match to protein family HMM TIGR00124%3B match to protein family HMM TIGR00125;gbkey=CDS;gene=citC;product=[citrate (pro-3S)-lyase] ligase;protein_id=AEF84236.1;transl_table=11 CP001843.1 Genbank gene 3025967 3027376 . - . ID=gene2718;Name=citF_2;gbkey=Gene;gene=citF_2;gene_biotype=protein_coding;locus_tag=TREPR_1288 CP001843.1 Genbank CDS 3025967 3027376 . - 0 ID=cds2592;Parent=gene2718;Dbxref=NCBI_GP:AEF84852.1;Name=AEF84852.1;Note=identified by match to protein family HMM PF04223%3B match to protein family HMM TIGR01584;gbkey=CDS;gene=citF_2;product=citrate lyase%2C alpha subunit;protein_id=AEF84852.1;transl_table=11 CP001843.1 Genbank gene 3027369 3028244 . - . ID=gene2719;Name=TREPR_1287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1287 CP001843.1 Genbank CDS 3027369 3028244 . - 0 ID=cds2593;Parent=gene2719;Dbxref=NCBI_GP:AEF86350.1;Name=AEF86350.1;Note=identified by match to protein family HMM PF03328;gbkey=CDS;product=citrate lyase subunit beta (Citrase beta chain) (Citrate(pro-3S)-lyase subunit beta) (Citryl-CoA lyase subunit);protein_id=AEF86350.1;transl_table=11 CP001843.1 Genbank gene 3028245 3028511 . - . ID=gene2720;Name=citD_2;gbkey=Gene;gene=citD_2;gene_biotype=protein_coding;locus_tag=TREPR_1286 CP001843.1 Genbank CDS 3028245 3028511 . - 0 ID=cds2594;Parent=gene2720;Dbxref=NCBI_GP:AEF86858.1;Name=AEF86858.1;Note=identified by match to protein family HMM PF04953%3B match to protein family HMM TIGR01608;gbkey=CDS;gene=citD_2;product=citrate lyase acyl carrier protein;protein_id=AEF86858.1;transl_table=11 CP001843.1 Genbank gene 3028610 3028804 . - . ID=gene2721;Name=TREPR_1285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1285 CP001843.1 Genbank CDS 3028610 3028804 . - 0 ID=cds2595;Parent=gene2721;Dbxref=NCBI_GP:AEF83625.1;Name=AEF83625.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83625.1;transl_table=11 CP001843.1 Genbank gene 3029211 3030647 . - . ID=gene2722;Name=TREPR_1284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1284 CP001843.1 Genbank CDS 3029211 3030647 . - 0 ID=cds2596;Parent=gene2722;Dbxref=NCBI_GP:AEF84580.1;Name=AEF84580.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;product=aminobenzoyl-glutamate utilization protein B;protein_id=AEF84580.1;transl_table=11 CP001843.1 Genbank gene 3030649 3031413 . - . ID=gene2723;Name=TREPR_1283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1283 CP001843.1 Genbank CDS 3030649 3031413 . - 0 ID=cds2597;Parent=gene2723;Dbxref=NCBI_GP:AEF85440.1;Name=AEF85440.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF85440.1;transl_table=11 CP001843.1 Genbank gene 3031424 3032149 . - . ID=gene2724;Name=TREPR_1282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1282 CP001843.1 Genbank CDS 3031424 3032149 . - 0 ID=cds2598;Parent=gene2724;Dbxref=NCBI_GP:AEF86246.1;Name=AEF86246.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF86246.1;transl_table=11 CP001843.1 Genbank gene 3032197 3032973 . - . ID=gene2725;Name=TREPR_1281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1281 CP001843.1 Genbank CDS 3032197 3032973 . - 0 ID=cds2599;Parent=gene2725;Dbxref=NCBI_GP:AEF86286.1;Name=AEF86286.1;Note=identified by match to protein family HMM PF07722;gbkey=CDS;product=gamma-glutamyl-gamma-aminobutyrate hydrolase (gamma-glu-gaba hydrolase);protein_id=AEF86286.1;transl_table=11 CP001843.1 Genbank gene 3033334 3034398 . + . ID=gene2726;Name=TREPR_1280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1280 CP001843.1 Genbank CDS 3033334 3034398 . + 0 ID=cds2600;Parent=gene2726;Dbxref=NCBI_GP:AEF83785.1;Name=AEF83785.1;Note=identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545%3B match to protein family HMM TIGR00747;gbkey=CDS;product=beta-ketoacyl-acyl-carrier-protein synthase III;protein_id=AEF83785.1;transl_table=11 CP001843.1 Genbank gene 3034392 3035366 . + . ID=gene2727;Name=TREPR_1279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1279 CP001843.1 Genbank CDS 3034392 3035366 . + 0 ID=cds2601;Parent=gene2727;Dbxref=NCBI_GP:AEF86309.1;Name=AEF86309.1;Note=identified by match to protein family HMM PF00698;gbkey=CDS;product=malonyl CoA-acyl carrier protein transacylase (MCT);protein_id=AEF86309.1;transl_table=11 CP001843.1 Genbank gene 3035390 3036124 . + . ID=gene2728;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=TREPR_1278 CP001843.1 Genbank CDS 3035390 3036124 . + 0 ID=cds2602;Parent=gene2728;Dbxref=NCBI_GP:AEF83771.1;Name=AEF83771.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830;gbkey=CDS;gene=fabG;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=AEF83771.1;transl_table=11 CP001843.1 Genbank gene 3036138 3037403 . + . ID=gene2729;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=TREPR_1277 CP001843.1 Genbank CDS 3036138 3037403 . + 0 ID=cds2603;Parent=gene2729;Dbxref=NCBI_GP:AEF86291.1;Name=AEF86291.1;Note=identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801%3B match to protein family HMM TIGR03150;gbkey=CDS;gene=fabF;product=3-oxoacyl-[acyl-carrier-protein] synthase II;protein_id=AEF86291.1;transl_table=11 CP001843.1 Genbank gene 3037422 3037841 . + . ID=gene2730;Name=TREPR_1276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1276 CP001843.1 Genbank CDS 3037422 3037841 . + 0 ID=cds2604;Parent=gene2730;Dbxref=NCBI_GP:AEF85360.1;Name=AEF85360.1;Note=identified by match to protein family HMM PF07977;gbkey=CDS;product=beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ;protein_id=AEF85360.1;transl_table=11 CP001843.1 Genbank gene 3038438 3039790 . + . ID=gene2731;Name=TREPR_1274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1274 CP001843.1 Genbank CDS 3038438 3039790 . + 0 ID=cds2605;Parent=gene2731;Dbxref=NCBI_GP:AEF84163.1;Name=AEF84163.1;Note=identified by match to protein family HMM PF02086;gbkey=CDS;product=D12 class N6 adenine-specific DNA methyltransferase;protein_id=AEF84163.1;transl_table=11 CP001843.1 Genbank pseudogene 3039791 3040318 . + . ID=gene2732;Name=TREPR_1273;Note=trans-2-enoyl-CoA reductase%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1273;pseudo=true CP001843.1 Genbank pseudogene 3040348 3041268 . + . ID=gene2733;Name=TREPR_1272;Note=trans-2-enoyl-CoA reductase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1272;pseudo=true CP001843.1 Genbank gene 3041308 3041901 . + . ID=gene2734;Name=TREPR_1271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1271 CP001843.1 Genbank CDS 3041308 3041901 . + 0 ID=cds2606;Parent=gene2734;Dbxref=NCBI_GP:AEF84024.1;Name=AEF84024.1;Note=identified by match to protein family HMM PF00364;gbkey=CDS;product=acetyl-CoA carboxylase%2C biotin carboxyl carrier protein;protein_id=AEF84024.1;transl_table=11 CP001843.1 Genbank gene 3041922 3043253 . + . ID=gene2735;Name=TREPR_1270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1270 CP001843.1 Genbank CDS 3041922 3043253 . + 0 ID=cds2607;Parent=gene2735;Dbxref=NCBI_GP:AEF85731.1;Name=AEF85731.1;Note=identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF02222%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786;gbkey=CDS;product=biotin carboxylase (Acetyl-CoA carboxylase subunit A) (ACC);protein_id=AEF85731.1;transl_table=11 CP001843.1 Genbank gene 3043243 3044067 . + . ID=gene2736;Name=accD_1;gbkey=Gene;gene=accD_1;gene_biotype=protein_coding;locus_tag=TREPR_1269 CP001843.1 Genbank CDS 3043243 3044067 . + 0 ID=cds2608;Parent=gene2736;Dbxref=NCBI_GP:AEF86902.1;Name=AEF86902.1;Note=identified by match to protein family HMM TIGR00515;gbkey=CDS;gene=accD_1;product=acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit;protein_id=AEF86902.1;transl_table=11 CP001843.1 Genbank gene 3044064 3044993 . + . ID=gene2737;Name=accA_1;gbkey=Gene;gene=accA_1;gene_biotype=protein_coding;locus_tag=TREPR_1268 CP001843.1 Genbank CDS 3044064 3044993 . + 0 ID=cds2609;Parent=gene2737;Dbxref=NCBI_GP:AEF85909.1;Name=AEF85909.1;Note=identified by match to protein family HMM PF03255%3B match to protein family HMM TIGR00513;gbkey=CDS;gene=accA_1;product=acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit;protein_id=AEF85909.1;transl_table=11 CP001843.1 Genbank gene 3045001 3046737 . - . ID=gene2738;Name=acd;gbkey=Gene;gene=acd;gene_biotype=protein_coding;locus_tag=TREPR_1267 CP001843.1 Genbank CDS 3045001 3046737 . - 0 ID=cds2610;Parent=gene2738;Dbxref=NCBI_GP:AEF85362.1;Name=AEF85362.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF08028;gbkey=CDS;gene=acd;product=acyl-CoA dehydrogenase family protein;protein_id=AEF85362.1;transl_table=11 CP001843.1 Genbank gene 3046750 3047757 . - . ID=gene2739;Name=etfA;gbkey=Gene;gene=etfA;gene_biotype=protein_coding;locus_tag=TREPR_1266 CP001843.1 Genbank CDS 3046750 3047757 . - 0 ID=cds2611;Parent=gene2739;Dbxref=NCBI_GP:AEF84359.1;Name=AEF84359.1;Note=identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012;gbkey=CDS;gene=etfA;product=electron transfer flavoprotein%2C alpha subunit;protein_id=AEF84359.1;transl_table=11 CP001843.1 Genbank gene 3047845 3048675 . - . ID=gene2740;Name=etfB;gbkey=Gene;gene=etfB;gene_biotype=protein_coding;locus_tag=TREPR_1265 CP001843.1 Genbank CDS 3047845 3048675 . - 0 ID=cds2612;Parent=gene2740;Dbxref=NCBI_GP:AEF83641.1;Name=AEF83641.1;Note=identified by match to protein family HMM PF01012;gbkey=CDS;gene=etfB;product=electron transfer flavoprotein%2C beta subunit;protein_id=AEF83641.1;transl_table=11 CP001843.1 Genbank gene 3048839 3049186 . + . ID=gene2741;Name=TREPR_1263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1263 CP001843.1 Genbank CDS 3048839 3049186 . + 0 ID=cds2613;Parent=gene2741;Dbxref=NCBI_GP:AEF85651.1;Name=AEF85651.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=transcriptional regulator%2C XRE family;protein_id=AEF85651.1;transl_table=11 CP001843.1 Genbank gene 3049186 3050436 . + . ID=gene2742;Name=TREPR_1262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1262 CP001843.1 Genbank CDS 3049186 3050436 . + 0 ID=cds2614;Parent=gene2742;Dbxref=NCBI_GP:AEF84650.1;Name=AEF84650.1;Note=identified by match to protein family HMM PF07804%3B match to protein family HMM PF07805;gbkey=CDS;product=HipA domain protein;protein_id=AEF84650.1;transl_table=11 CP001843.1 Genbank gene 3050506 3051837 . - . ID=gene2743;Name=TREPR_1261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1261 CP001843.1 Genbank CDS 3050506 3051837 . - 0 ID=cds2615;Parent=gene2743;Dbxref=NCBI_GP:AEF86214.1;Name=AEF86214.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00211%3B match to protein family HMM PF07719;gbkey=CDS;product=adenylate/guanylate cyclase catalytic domain protein;protein_id=AEF86214.1;transl_table=11 CP001843.1 Genbank gene 3051827 3054091 . - . ID=gene2744;Name=TREPR_1260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1260 CP001843.1 Genbank CDS 3051827 3054091 . - 0 ID=cds2616;Parent=gene2744;Dbxref=NCBI_GP:AEF85348.1;Name=AEF85348.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=sensory box histidine kinase/response regulator;protein_id=AEF85348.1;transl_table=11 CP001843.1 Genbank gene 3054084 3055103 . - . ID=gene2745;Name=TREPR_1259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1259 CP001843.1 Genbank CDS 3054084 3055103 . - 0 ID=cds2617;Parent=gene2745;Dbxref=NCBI_GP:AEF86967.1;Name=AEF86967.1;Note=identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86967.1;transl_table=11 CP001843.1 Genbank gene 3055100 3057892 . - . ID=gene2746;Name=TREPR_1258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1258 CP001843.1 Genbank CDS 3055100 3057892 . - 0 ID=cds2618;Parent=gene2746;Dbxref=NCBI_GP:AEF84417.1;Name=AEF84417.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor protein GacS;protein_id=AEF84417.1;transl_table=11 CP001843.1 Genbank gene 3057971 3059302 . - . ID=gene2747;Name=TREPR_1257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1257 CP001843.1 Genbank CDS 3057971 3059302 . - 0 ID=cds2619;Parent=gene2747;Dbxref=NCBI_GP:AEF85176.1;Name=AEF85176.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00211;gbkey=CDS;product=putative adenylate cyclase 2 (ATP pyrophosphate-lyase 2) (Adenylylcyclase 2) (AC2);protein_id=AEF85176.1;transl_table=11 CP001843.1 Genbank gene 3059292 3063527 . - . ID=gene2748;Name=TREPR_1256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1256 CP001843.1 Genbank CDS 3059292 3063527 . - 0 ID=cds2620;Parent=gene2748;Dbxref=NCBI_GP:AEF85959.1;Name=AEF85959.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF07494;gbkey=CDS;product=hybrid sensory kinase;protein_id=AEF85959.1;transl_table=11 CP001843.1 Genbank gene 3063553 3066357 . - . ID=gene2749;Name=TREPR_1255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1255 CP001843.1 Genbank CDS 3063553 3066357 . - 0 ID=cds2621;Parent=gene2749;Dbxref=NCBI_GP:AEF86411.1;Name=AEF86411.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=sensory box sensor histidine kinase/response regulator;protein_id=AEF86411.1;transl_table=11 CP001843.1 Genbank gene 3066354 3069575 . - . ID=gene2750;Name=TREPR_1254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1254 CP001843.1 Genbank CDS 3066354 3069575 . - 0 ID=cds2622;Parent=gene2750;Dbxref=NCBI_GP:AEF85698.1;Name=AEF85698.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor protein GacS;protein_id=AEF85698.1;transl_table=11 CP001843.1 Genbank gene 3069572 3070711 . - . ID=gene2751;Name=TREPR_1253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1253 CP001843.1 Genbank CDS 3069572 3070711 . - 0 ID=cds2623;Parent=gene2751;Dbxref=NCBI_GP:AEF84899.1;Name=AEF84899.1;Note=identified by match to protein family HMM PF02608;gbkey=CDS;product=membrane protein%2C Bmp family;protein_id=AEF84899.1;transl_table=11 CP001843.1 Genbank gene 3070723 3071868 . - . ID=gene2752;Name=TREPR_1252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1252 CP001843.1 Genbank CDS 3070723 3071868 . - 0 ID=cds2624;Parent=gene2752;Dbxref=NCBI_GP:AEF84158.1;Name=AEF84158.1;Note=identified by match to protein family HMM PF02608;gbkey=CDS;product=membrane protein%2C Bmp family;protein_id=AEF84158.1;transl_table=11 CP001843.1 Genbank gene 3071865 3074768 . - . ID=gene2753;Name=TREPR_1251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1251 CP001843.1 Genbank CDS 3071865 3074768 . - 0 ID=cds2625;Parent=gene2753;Dbxref=NCBI_GP:AEF83979.1;Name=AEF83979.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B overlaps another CDS with the same product name;gbkey=CDS;product=sensor protein GacS;protein_id=AEF83979.1;transl_table=11 CP001843.1 Genbank gene 3074765 3078013 . - . ID=gene2754;Name=TREPR_1250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1250 CP001843.1 Genbank CDS 3074765 3078013 . - 0 ID=cds2626;Parent=gene2754;Dbxref=NCBI_GP:AEF83972.1;Name=AEF83972.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF02743%3B overlaps another CDS with the same product name;gbkey=CDS;product=sensor protein GacS;protein_id=AEF83972.1;transl_table=11 CP001843.1 Genbank gene 3078087 3080771 . - . ID=gene2755;Name=TREPR_1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1249 CP001843.1 Genbank CDS 3078087 3080771 . - 0 ID=cds2627;Parent=gene2755;Dbxref=NCBI_GP:AEF86047.1;Name=AEF86047.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518;gbkey=CDS;product=sensor histidine kinase with ATPase domain%2C two fused;protein_id=AEF86047.1;transl_table=11 CP001843.1 Genbank gene 3080832 3080972 . + . ID=gene2756;Name=TREPR_1248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1248 CP001843.1 Genbank CDS 3080832 3080972 . + 0 ID=cds2628;Parent=gene2756;Dbxref=NCBI_GP:AEF86384.1;Name=AEF86384.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86384.1;transl_table=11 CP001843.1 Genbank gene 3081335 3082711 . - . ID=gene2757;Name=TREPR_1247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1247 CP001843.1 Genbank CDS 3081335 3082711 . - 0 ID=cds2629;Parent=gene2757;Dbxref=NCBI_GP:AEF83908.1;Name=AEF83908.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF83908.1;transl_table=11 CP001843.1 Genbank gene 3082737 3083489 . - . ID=gene2758;Name=TREPR_1246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1246 CP001843.1 Genbank CDS 3082737 3083489 . - 0 ID=cds2630;Parent=gene2758;Dbxref=NCBI_GP:AEF84721.1;Name=AEF84721.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=putative NADH dehydrogenase/nad(p)h nitroreductase;protein_id=AEF84721.1;transl_table=11 CP001843.1 Genbank gene 3083514 3083774 . - . ID=gene2759;Name=TREPR_1245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1245 CP001843.1 Genbank CDS 3083514 3083774 . - 0 ID=cds2631;Parent=gene2759;Dbxref=NCBI_GP:AEF85831.1;Name=AEF85831.1;gbkey=CDS;product=aminoglycoside adenyltransferase;protein_id=AEF85831.1;transl_table=11 CP001843.1 Genbank gene 3083782 3084093 . - . ID=gene2760;Name=TREPR_1244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1244 CP001843.1 Genbank CDS 3083782 3084093 . - 0 ID=cds2632;Parent=gene2760;Dbxref=NCBI_GP:AEF86634.1;Name=AEF86634.1;Note=identified by match to protein family HMM PF01909;gbkey=CDS;product=nucleotidyltransferase;protein_id=AEF86634.1;transl_table=11 CP001843.1 Genbank gene 3084153 3084473 . - . ID=gene2761;Name=TREPR_1243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1243 CP001843.1 Genbank CDS 3084153 3084473 . - 0 ID=cds2633;Parent=gene2761;Dbxref=NCBI_GP:AEF84080.1;Name=AEF84080.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84080.1;transl_table=11 CP001843.1 Genbank gene 3084517 3085089 . - . ID=gene2762;Name=TREPR_1242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1242 CP001843.1 Genbank CDS 3084517 3085089 . - 0 ID=cds2634;Parent=gene2762;Dbxref=NCBI_GP:AEF85052.1;Name=AEF85052.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85052.1;transl_table=11 CP001843.1 Genbank gene 3085851 3086096 . + . ID=gene2763;Name=TREPR_1240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1240 CP001843.1 Genbank CDS 3085851 3086096 . + 0 ID=cds2635;Parent=gene2763;Dbxref=NCBI_GP:AEF84874.1;Name=AEF84874.1;gbkey=CDS;product=transcriptional regulator;protein_id=AEF84874.1;transl_table=11 CP001843.1 Genbank gene 3086177 3086485 . - . ID=gene2764;Name=TREPR_1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1239 CP001843.1 Genbank CDS 3086177 3086485 . - 0 ID=cds2636;Parent=gene2764;Dbxref=NCBI_GP:AEF84169.1;Name=AEF84169.1;Note=identified by match to protein family HMM PF05016;gbkey=CDS;product=plasmid stabilization system;protein_id=AEF84169.1;transl_table=11 CP001843.1 Genbank gene 3086482 3086766 . - . ID=gene2765;Name=TREPR_1238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1238 CP001843.1 Genbank CDS 3086482 3086766 . - 0 ID=cds2637;Parent=gene2765;Dbxref=NCBI_GP:AEF84835.1;Name=AEF84835.1;Note=identified by match to protein family HMM TIGR01552;gbkey=CDS;product=prevent-host-death family protein;protein_id=AEF84835.1;transl_table=11 CP001843.1 Genbank gene 3087118 3087543 . - . ID=gene2766;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=TREPR_1237 CP001843.1 Genbank CDS 3087118 3087543 . - 0 ID=cds2638;Parent=gene2766;Dbxref=NCBI_GP:AEF86088.1;Name=AEF86088.1;Note=identified by match to protein family HMM PF02823%3B match to protein family HMM TIGR01216;gbkey=CDS;gene=atpC;product=ATP synthase F1%2C epsilon subunit;protein_id=AEF86088.1;transl_table=11 CP001843.1 Genbank gene 3087552 3088934 . - . ID=gene2767;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=TREPR_1236 CP001843.1 Genbank CDS 3087552 3088934 . - 0 ID=cds2639;Parent=gene2767;Dbxref=NCBI_GP:AEF86920.1;Name=AEF86920.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01039;gbkey=CDS;gene=atpD;product=ATP synthase F1%2C beta subunit;protein_id=AEF86920.1;transl_table=11 CP001843.1 Genbank gene 3088993 3089880 . - . ID=gene2768;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=TREPR_1235 CP001843.1 Genbank CDS 3088993 3089880 . - 0 ID=cds2640;Parent=gene2768;Dbxref=NCBI_GP:AEF83719.1;Name=AEF83719.1;Note=identified by match to protein family HMM PF00231%3B match to protein family HMM TIGR01146;gbkey=CDS;gene=atpG;product=ATP synthase F1%2C gamma subunit;protein_id=AEF83719.1;transl_table=11 CP001843.1 Genbank gene 3089889 3091391 . - . ID=gene2769;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=TREPR_1234 CP001843.1 Genbank CDS 3089889 3091391 . - 0 ID=cds2641;Parent=gene2769;Dbxref=NCBI_GP:AEF84479.1;Name=AEF84479.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR00962;gbkey=CDS;gene=atpA;product=ATP synthase F1%2C alpha subunit;protein_id=AEF84479.1;transl_table=11 CP001843.1 Genbank gene 3091385 3091951 . - . ID=gene2770;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=TREPR_1233 CP001843.1 Genbank CDS 3091385 3091951 . - 0 ID=cds2642;Parent=gene2770;Dbxref=NCBI_GP:AEF84863.1;Name=AEF84863.1;Note=identified by match to protein family HMM PF00213%3B match to protein family HMM TIGR01145;gbkey=CDS;gene=atpH;product=ATP synthase F1%2C delta subunit;protein_id=AEF84863.1;transl_table=11 CP001843.1 Genbank gene 3091951 3092454 . - . ID=gene2771;Name=TREPR_1232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1232 CP001843.1 Genbank CDS 3091951 3092454 . - 0 ID=cds2643;Parent=gene2771;Dbxref=NCBI_GP:AEF86567.1;Name=AEF86567.1;Note=identified by match to protein family HMM PF00430;gbkey=CDS;product=F0F1-type ATP synthase b subunit;protein_id=AEF86567.1;transl_table=11 CP001843.1 Genbank gene 3092466 3092696 . - . ID=gene2772;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=TREPR_1231 CP001843.1 Genbank CDS 3092466 3092696 . - 0 ID=cds2644;Parent=gene2772;Dbxref=NCBI_GP:AEF83998.1;Name=AEF83998.1;Note=identified by match to protein family HMM PF00137%3B match to protein family HMM TIGR01260;gbkey=CDS;gene=atpE;product=ATP synthase F0%2C C subunit;protein_id=AEF83998.1;transl_table=11 CP001843.1 Genbank gene 3092852 3093574 . - . ID=gene2773;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=TREPR_1230 CP001843.1 Genbank CDS 3092852 3093574 . - 0 ID=cds2645;Parent=gene2773;Dbxref=NCBI_GP:AEF87017.1;Name=AEF87017.1;Note=identified by match to protein family HMM PF00119%3B match to protein family HMM TIGR01131;gbkey=CDS;gene=atpB;product=ATP synthase F0%2C A subunit;protein_id=AEF87017.1;transl_table=11 CP001843.1 Genbank gene 3093636 3094151 . - . ID=gene2774;Name=TREPR_1229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1229 CP001843.1 Genbank CDS 3093636 3094151 . - 0 ID=cds2646;Parent=gene2774;Dbxref=NCBI_GP:AEF85714.1;Name=AEF85714.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85714.1;transl_table=11 CP001843.1 Genbank gene 3094223 3095431 . - . ID=gene2775;Name=TREPR_1228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1228 CP001843.1 Genbank CDS 3094223 3095431 . - 0 ID=cds2647;Parent=gene2775;Dbxref=NCBI_GP:AEF86461.1;Name=AEF86461.1;Note=identified by match to protein family HMM PF01053;gbkey=CDS;product=methionine gamma-lyase (L-methioninase);protein_id=AEF86461.1;transl_table=11 CP001843.1 Genbank gene 3095568 3096635 . + . ID=gene2776;Name=TREPR_1227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1227 CP001843.1 Genbank CDS 3095568 3096635 . + 0 ID=cds2648;Parent=gene2776;Dbxref=NCBI_GP:AEF84104.1;Name=AEF84104.1;gbkey=CDS;product=PfoR protein;protein_id=AEF84104.1;transl_table=11 CP001843.1 Genbank gene 3096638 3097135 . - . ID=gene2777;Name=TREPR_1226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1226 CP001843.1 Genbank CDS 3096638 3097135 . - 0 ID=cds2649;Parent=gene2777;Dbxref=NCBI_GP:AEF84921.1;Name=AEF84921.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM TIGR00177;gbkey=CDS;product=molybdenum cofactor synthesis domain protein;protein_id=AEF84921.1;transl_table=11 CP001843.1 Genbank gene 3097125 3097553 . - . ID=gene2778;Name=TREPR_1225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1225 CP001843.1 Genbank CDS 3097125 3097553 . - 0 ID=cds2650;Parent=gene2778;Dbxref=NCBI_GP:AEF85256.1;Name=AEF85256.1;Note=identified by match to protein family HMM PF03473;gbkey=CDS;product=MOSC domain protein;protein_id=AEF85256.1;transl_table=11 CP001843.1 Genbank gene 3097556 3098560 . - . ID=gene2779;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=TREPR_1224 CP001843.1 Genbank CDS 3097556 3098560 . - 0 ID=cds2651;Parent=gene2779;Dbxref=NCBI_GP:AEF85852.1;Name=AEF85852.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06463%3B match to protein family HMM TIGR02666;gbkey=CDS;gene=moaA;product=molybdenum cofactor biosynthesis protein A;protein_id=AEF85852.1;transl_table=11 CP001843.1 Genbank gene 3098566 3099096 . - . ID=gene2780;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=TREPR_1223 CP001843.1 Genbank CDS 3098566 3099096 . - 0 ID=cds2652;Parent=gene2780;Dbxref=NCBI_GP:AEF83729.1;Name=AEF83729.1;Note=identified by match to protein family HMM PF01967%3B match to protein family HMM TIGR00581;gbkey=CDS;gene=moaC;product=molybdenum cofactor biosynthesis protein C;protein_id=AEF83729.1;transl_table=11 CP001843.1 Genbank gene 3099398 3099901 . - . ID=gene2781;Name=TREPR_1222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1222 CP001843.1 Genbank CDS 3099398 3099901 . - 0 ID=cds2653;Parent=gene2781;Dbxref=NCBI_GP:AEF84453.1;Name=AEF84453.1;Note=identified by match to protein family HMM PF01381%3B match to protein family HMM TIGR02607;gbkey=CDS;product=putative addiction module antidote protein%2C HigA family;protein_id=AEF84453.1;transl_table=11 CP001843.1 Genbank gene 3100112 3101221 . - . ID=gene2782;Name=TREPR_1221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1221 CP001843.1 Genbank CDS 3100112 3101221 . - 0 ID=cds2654;Parent=gene2782;Dbxref=NCBI_GP:AEF86529.1;Name=AEF86529.1;Note=identified by match to protein family HMM PF03102%3B match to protein family HMM PF08666;gbkey=CDS;product=NeuB family protein;protein_id=AEF86529.1;transl_table=11 CP001843.1 Genbank gene 3101502 3103013 . - . ID=gene2783;Name=TREPR_1220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1220 CP001843.1 Genbank CDS 3101502 3103013 . - 0 ID=cds2655;Parent=gene2783;Dbxref=NCBI_GP:AEF85294.1;Name=AEF85294.1;Note=identified by match to protein family HMM PF00089%3B match to protein family HMM PF00595%3B match to protein family HMM TIGR02037;gbkey=CDS;product=putative serine protease MucD;protein_id=AEF85294.1;transl_table=11 CP001843.1 Genbank gene 3103102 3103896 . - . ID=gene2784;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=TREPR_1219 CP001843.1 Genbank CDS 3103102 3103896 . - 0 ID=cds2656;Parent=gene2784;Dbxref=NCBI_GP:AEF86377.1;Name=AEF86377.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500;gbkey=CDS;gene=map;product=methionine aminopeptidase%2C type I;protein_id=AEF86377.1;transl_table=11 CP001843.1 Genbank gene 3103905 3104681 . - . ID=gene2785;Name=TREPR_1218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1218 CP001843.1 Genbank CDS 3103905 3104681 . - 0 ID=cds2657;Parent=gene2785;Dbxref=NCBI_GP:AEF86122.1;Name=AEF86122.1;Note=identified by match to protein family HMM PF00226;gbkey=CDS;product=DnaJ domain protein;protein_id=AEF86122.1;transl_table=11 CP001843.1 Genbank gene 3104674 3105075 . - . ID=gene2786;Name=TREPR_1217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1217 CP001843.1 Genbank CDS 3104674 3105075 . - 0 ID=cds2658;Parent=gene2786;Dbxref=NCBI_GP:AEF85066.1;Name=AEF85066.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85066.1;transl_table=11 CP001843.1 Genbank gene 3105100 3105585 . - . ID=gene2787;Name=TREPR_1216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1216 CP001843.1 Genbank CDS 3105100 3105585 . - 0 ID=cds2659;Parent=gene2787;Dbxref=NCBI_GP:AEF84122.1;Name=AEF84122.1;Note=identified by match to protein family HMM PF00582;gbkey=CDS;product=putative universal stress protein family;protein_id=AEF84122.1;transl_table=11 CP001843.1 Genbank gene 3105582 3106232 . - . ID=gene2788;Name=TREPR_1215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1215 CP001843.1 Genbank CDS 3105582 3106232 . - 0 ID=cds2660;Parent=gene2788;Dbxref=NCBI_GP:AEF86697.1;Name=AEF86697.1;Note=identified by match to protein family HMM PF01813%3B match to protein family HMM TIGR00309;gbkey=CDS;product=V-type ATPase%2C D subunit;protein_id=AEF86697.1;transl_table=11 CP001843.1 Genbank gene 3106329 3107207 . - . ID=gene2789;Name=TREPR_1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1214 CP001843.1 Genbank CDS 3106329 3107207 . - 0 ID=cds2661;Parent=gene2789;Dbxref=NCBI_GP:AEF85771.1;Name=AEF85771.1;Note=identified by match to protein family HMM PF02588;gbkey=CDS;product=putative membrane protein;protein_id=AEF85771.1;transl_table=11 CP001843.1 Genbank gene 3107280 3107846 . - . ID=gene2790;Name=TREPR_1213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1213 CP001843.1 Genbank CDS 3107280 3107846 . - 0 ID=cds2662;Parent=gene2790;Dbxref=NCBI_GP:AEF83898.1;Name=AEF83898.1;gbkey=CDS;product=4Fe-4S ferredoxin%2C iron-sulfur binding domain protein;protein_id=AEF83898.1;transl_table=11 CP001843.1 Genbank gene 3107983 3108819 . - . ID=gene2791;Name=TREPR_1212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1212 CP001843.1 Genbank CDS 3107983 3108819 . - 0 ID=cds2663;Parent=gene2791;Dbxref=NCBI_GP:AEF86433.1;Name=AEF86433.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86433.1;transl_table=11 CP001843.1 Genbank gene 3108816 3109466 . - . ID=gene2792;Name=TREPR_1211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1211 CP001843.1 Genbank CDS 3108816 3109466 . - 0 ID=cds2664;Parent=gene2792;Dbxref=NCBI_GP:AEF86378.1;Name=AEF86378.1;gbkey=CDS;product=probable N-glycosylase/DNA lyase;protein_id=AEF86378.1;transl_table=11 CP001843.1 Genbank gene 3109463 3109606 . - . ID=gene2793;Name=TREPR_1210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1210 CP001843.1 Genbank CDS 3109463 3109606 . - 0 ID=cds2665;Parent=gene2793;Dbxref=NCBI_GP:AEF86904.1;Name=AEF86904.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86904.1;transl_table=11 CP001843.1 Genbank gene 3109628 3110683 . + . ID=gene2794;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=TREPR_1209 CP001843.1 Genbank CDS 3109628 3110683 . + 0 ID=cds2666;Parent=gene2794;Dbxref=NCBI_GP:AEF86164.1;Name=AEF86164.1;Note=identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00154;gbkey=CDS;gene=ispE;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=AEF86164.1;transl_table=11 CP001843.1 Genbank gene 3110726 3111007 . + . ID=gene2795;Name=TREPR_1208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1208 CP001843.1 Genbank CDS 3110726 3111007 . + 0 ID=cds2667;Parent=gene2795;Dbxref=NCBI_GP:AEF86830.1;Name=AEF86830.1;Note=identified by match to protein family HMM PF04026;gbkey=CDS;product=putative septation protein SpoVG;protein_id=AEF86830.1;transl_table=11 CP001843.1 Genbank gene 3111015 3111086 . + . ID=gene2796;Name=TREPR_3914;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3914 CP001843.1 Genbank tRNA 3111015 3111086 . + . ID=rna47;Parent=gene2796;gbkey=tRNA;product=tRNA-Gln CP001843.1 Genbank exon 3111015 3111086 . + . ID=id53;Parent=rna47;gbkey=tRNA;product=tRNA-Gln CP001843.1 Genbank gene 3111277 3111921 . + . ID=gene2797;Name=TREPR_1206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1206 CP001843.1 Genbank CDS 3111277 3111921 . + 0 ID=cds2668;Parent=gene2797;Dbxref=NCBI_GP:AEF86360.1;Name=AEF86360.1;Note=identified by match to protein family HMM PF01386%3B match to protein family HMM TIGR00731;gbkey=CDS;product=ribosomal protein L25%2C Ctc-form;protein_id=AEF86360.1;transl_table=11 CP001843.1 Genbank gene 3111990 3113249 . - . ID=gene2798;Name=TREPR_1205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1205 CP001843.1 Genbank CDS 3111990 3113249 . - 0 ID=cds2669;Parent=gene2798;Dbxref=NCBI_GP:AEF83529.1;Name=AEF83529.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;product=permease;protein_id=AEF83529.1;transl_table=11 CP001843.1 Genbank gene 3113399 3113632 . - . ID=gene2799;Name=TREPR_1204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1204 CP001843.1 Genbank CDS 3113399 3113632 . - 0 ID=cds2670;Parent=gene2799;Dbxref=NCBI_GP:AEF84725.1;Name=AEF84725.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84725.1;transl_table=11 CP001843.1 Genbank gene 3113816 3114274 . - . ID=gene2800;Name=TREPR_1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1203 CP001843.1 Genbank CDS 3113816 3114274 . - 0 ID=cds2671;Parent=gene2800;Dbxref=NCBI_GP:AEF85584.1;Name=AEF85584.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;product=transcriptional regulator%2C MarR family;protein_id=AEF85584.1;transl_table=11 CP001843.1 Genbank gene 3114392 3115819 . + . ID=gene2801;Name=TREPR_1202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1202 CP001843.1 Genbank CDS 3114392 3115819 . + 0 ID=cds2672;Parent=gene2801;Dbxref=NCBI_GP:AEF86650.1;Name=AEF86650.1;Note=identified by match to protein family HMM PF01171%3B match to protein family HMM TIGR02432;gbkey=CDS;product=tRNA(Ile)-lysidine synthase;protein_id=AEF86650.1;transl_table=11 CP001843.1 Genbank gene 3115809 3117722 . + . ID=gene2802;Name=TREPR_1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1201 CP001843.1 Genbank CDS 3115809 3117722 . + 0 ID=cds2673;Parent=gene2802;Dbxref=NCBI_GP:AEF84342.1;Name=AEF84342.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR01241;gbkey=CDS;product=cell division protease FtsH;protein_id=AEF84342.1;transl_table=11 CP001843.1 Genbank gene 3117722 3119455 . + . ID=gene2803;Name=TREPR_1200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1200 CP001843.1 Genbank CDS 3117722 3119455 . + 0 ID=cds2674;Parent=gene2803;Dbxref=NCBI_GP:AEF86684.1;Name=AEF86684.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86684.1;transl_table=11 CP001843.1 Genbank gene 3119461 3121299 . + . ID=gene2804;Name=TREPR_1199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1199 CP001843.1 Genbank CDS 3119461 3121299 . + 0 ID=cds2675;Parent=gene2804;Dbxref=NCBI_GP:AEF83679.1;Name=AEF83679.1;Note=identified by match to protein family HMM PF00089;gbkey=CDS;product=trypsin domain/PDZ domain protein;protein_id=AEF83679.1;transl_table=11 CP001843.1 Genbank gene 3121306 3121785 . - . ID=gene2805;Name=TREPR_1198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1198 CP001843.1 Genbank CDS 3121306 3121785 . - 0 ID=cds2676;Parent=gene2805;Dbxref=NCBI_GP:AEF84599.1;Name=AEF84599.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;product=5-nitroimidazole antibiotic resistance protein;protein_id=AEF84599.1;transl_table=11 CP001843.1 Genbank gene 3121941 3122258 . - . ID=gene2806;Name=TREPR_1197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1197 CP001843.1 Genbank CDS 3121941 3122258 . - 0 ID=cds2677;Parent=gene2806;Dbxref=NCBI_GP:AEF85407.1;Name=AEF85407.1;Note=identified by match to protein family HMM PF02452;gbkey=CDS;product=toxin-antitoxin system%2C toxin component%2C MazF family;protein_id=AEF85407.1;transl_table=11 CP001843.1 Genbank gene 3122258 3122590 . - . ID=gene2807;Name=TREPR_1196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1196 CP001843.1 Genbank CDS 3122258 3122590 . - 0 ID=cds2678;Parent=gene2807;Dbxref=NCBI_GP:AEF86599.1;Name=AEF86599.1;Note=identified by match to protein family HMM PF04014;gbkey=CDS;product=toxin-antitoxin system%2C antitoxin component%2C MazF family;protein_id=AEF86599.1;transl_table=11 CP001843.1 Genbank gene 3122655 3123356 . + . ID=gene2808;Name=TREPR_1195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1195 CP001843.1 Genbank CDS 3122655 3123356 . + 0 ID=cds2679;Parent=gene2808;Dbxref=NCBI_GP:AEF84812.1;Name=AEF84812.1;Note=identified by match to protein family HMM PF03548;gbkey=CDS;product=outer membrane lipoprotein carrier protein LolA;protein_id=AEF84812.1;transl_table=11 CP001843.1 Genbank gene 3123428 3124552 . + . ID=gene2809;Name=TREPR_1194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1194 CP001843.1 Genbank CDS 3123428 3124552 . + 0 ID=cds2680;Parent=gene2809;Dbxref=NCBI_GP:AEF85776.1;Name=AEF85776.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85776.1;transl_table=11 CP001843.1 Genbank gene 3124555 3126021 . + . ID=gene2810;Name=TREPR_1193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1193 CP001843.1 Genbank CDS 3124555 3126021 . + 0 ID=cds2681;Parent=gene2810;Dbxref=NCBI_GP:AEF86751.1;Name=AEF86751.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01125;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86751.1;transl_table=11 CP001843.1 Genbank gene 3126092 3128560 . + . ID=gene2811;Name=TREPR_1192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1192 CP001843.1 Genbank CDS 3126092 3128560 . + 0 ID=cds2682;Parent=gene2811;Dbxref=NCBI_GP:AEF84185.1;Name=AEF84185.1;Note=identified by match to protein family HMM PF00580;gbkey=CDS;product=ATP-dependent DNA helicase PcrA;protein_id=AEF84185.1;transl_table=11 CP001843.1 Genbank gene 3128553 3129398 . + . ID=gene2812;Name=TREPR_1191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1191 CP001843.1 Genbank CDS 3128553 3129398 . + 0 ID=cds2683;Parent=gene2812;Dbxref=NCBI_GP:AEF85958.1;Name=AEF85958.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85958.1;transl_table=11 CP001843.1 Genbank gene 3129480 3129617 . + . ID=gene2813;Name=TREPR_1190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1190 CP001843.1 Genbank CDS 3129480 3129617 . + 0 ID=cds2684;Parent=gene2813;Dbxref=NCBI_GP:AEF86792.1;Name=AEF86792.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86792.1;transl_table=11 CP001843.1 Genbank gene 3129627 3132245 . - . ID=gene2814;Name=TREPR_1189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1189 CP001843.1 Genbank CDS 3129627 3132245 . - 0 ID=cds2685;Parent=gene2814;Dbxref=NCBI_GP:AEF86021.1;Name=AEF86021.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86021.1;transl_table=11 CP001843.1 Genbank gene 3132410 3132550 . + . ID=gene2815;Name=TREPR_1187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1187 CP001843.1 Genbank CDS 3132410 3132550 . + 0 ID=cds2686;Parent=gene2815;Dbxref=NCBI_GP:AEF83548.1;Name=AEF83548.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83548.1;transl_table=11 CP001843.1 Genbank gene 3132554 3133825 . + . ID=gene2816;Name=TREPR_1186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1186 CP001843.1 Genbank CDS 3132554 3133825 . + 0 ID=cds2687;Parent=gene2816;Dbxref=NCBI_GP:AEF86980.1;Name=AEF86980.1;Note=identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=AEF86980.1;transl_table=11 CP001843.1 Genbank gene 3133839 3135044 . + . ID=gene2817;Name=TREPR_1185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1185 CP001843.1 Genbank CDS 3133839 3135044 . + 0 ID=cds2688;Parent=gene2817;Dbxref=NCBI_GP:AEF84683.1;Name=AEF84683.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR03542;gbkey=CDS;product=LL-diaminopimelate aminotransferase;protein_id=AEF84683.1;transl_table=11 CP001843.1 Genbank gene 3135137 3135403 . + . ID=gene2818;Name=TREPR_1184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1184 CP001843.1 Genbank CDS 3135137 3135403 . + 0 ID=cds2689;Parent=gene2818;Dbxref=NCBI_GP:AEF83572.1;Name=AEF83572.1;Note=identified by match to protein family HMM PF02604%3B match to protein family HMM TIGR01552;gbkey=CDS;product=prevent-host-death family protein;protein_id=AEF83572.1;transl_table=11 CP001843.1 Genbank gene 3135400 3135813 . + . ID=gene2819;Name=TREPR_1183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1183 CP001843.1 Genbank CDS 3135400 3135813 . + 0 ID=cds2690;Parent=gene2819;Dbxref=NCBI_GP:AEF86519.1;Name=AEF86519.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=plasmid stability protein;protein_id=AEF86519.1;transl_table=11 CP001843.1 Genbank gene 3135904 3137610 . + . ID=gene2820;Name=TREPR_1182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1182 CP001843.1 Genbank CDS 3135904 3137610 . + 0 ID=cds2691;Parent=gene2820;Dbxref=NCBI_GP:AEF86610.1;Name=AEF86610.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR00614;gbkey=CDS;product=ATP-dependent DNA helicase%2C RecQ family;protein_id=AEF86610.1;transl_table=11 CP001843.1 Genbank gene 3137664 3137894 . - . ID=gene2821;Name=TREPR_1181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1181 CP001843.1 Genbank CDS 3137664 3137894 . - 0 ID=cds2692;Parent=gene2821;Dbxref=NCBI_GP:AEF84833.1;Name=AEF84833.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84833.1;transl_table=11 CP001843.1 Genbank gene 3137923 3139008 . - . ID=gene2822;Name=TREPR_1180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1180 CP001843.1 Genbank CDS 3137923 3139008 . - 0 ID=cds2693;Parent=gene2822;Dbxref=NCBI_GP:AEF84124.1;Name=AEF84124.1;Note=identified by match to protein family HMM PF03793;gbkey=CDS;product=pasta domain protein;protein_id=AEF84124.1;transl_table=11 CP001843.1 Genbank gene 3139018 3140067 . - . ID=gene2823;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=TREPR_1179 CP001843.1 Genbank CDS 3139018 3140067 . - 0 ID=cds2694;Parent=gene2823;Dbxref=NCBI_GP:AEF85150.1;Name=AEF85150.1;Note=identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=AEF85150.1;transl_table=11 CP001843.1 Genbank gene 3140069 3140557 . - . ID=gene2824;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=TREPR_1178 CP001843.1 Genbank CDS 3140069 3140557 . - 0 ID=cds2695;Parent=gene2824;Dbxref=NCBI_GP:AEF86318.1;Name=AEF86318.1;Note=identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079;gbkey=CDS;gene=def;product=peptide deformylase;protein_id=AEF86318.1;transl_table=11 CP001843.1 Genbank gene 3140872 3142041 . + . ID=gene2825;Name=TREPR_1177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1177 CP001843.1 Genbank CDS 3140872 3142041 . + 0 ID=cds2696;Parent=gene2825;Dbxref=NCBI_GP:AEF86609.1;Name=AEF86609.1;Note=identified by match to protein family HMM PF00483;gbkey=CDS;product=mannose-1-phosphate guanylyltransferase [GDP] (GDP-mannose pyrophosphorylase) (GMP);protein_id=AEF86609.1;transl_table=11 CP001843.1 Genbank gene 3142145 3143482 . + . ID=gene2826;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=TREPR_1176 CP001843.1 Genbank CDS 3142145 3143482 . + 0 ID=cds2697;Parent=gene2826;Dbxref=NCBI_GP:AEF84361.1;Name=AEF84361.1;Note=identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016;gbkey=CDS;gene=ackA;product=acetate kinase;protein_id=AEF84361.1;transl_table=11 CP001843.1 Genbank gene 3143677 3144228 . + . ID=gene2827;Name=TREPR_1175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1175 CP001843.1 Genbank CDS 3143677 3144228 . + 0 ID=cds2698;Parent=gene2827;Dbxref=NCBI_GP:AEF85533.1;Name=AEF85533.1;Note=identified by match to protein family HMM PF00011;gbkey=CDS;product=putative heat shock protein;protein_id=AEF85533.1;transl_table=11 CP001843.1 Genbank gene 3144327 3145097 . - . ID=gene2828;Name=TREPR_1174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1174 CP001843.1 Genbank CDS 3144327 3145097 . - 0 ID=cds2699;Parent=gene2828;Dbxref=NCBI_GP:AEF86691.1;Name=AEF86691.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86691.1;transl_table=11 CP001843.1 Genbank gene 3145184 3146890 . + . ID=gene2829;Name=TREPR_1173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1173 CP001843.1 Genbank CDS 3145184 3146890 . + 0 ID=cds2700;Parent=gene2829;Dbxref=NCBI_GP:AEF83575.1;Name=AEF83575.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=long-chain acyl-CoA synthetase;protein_id=AEF83575.1;transl_table=11 CP001843.1 Genbank gene 3146937 3147794 . - . ID=gene2830;Name=TREPR_1172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1172 CP001843.1 Genbank CDS 3146937 3147794 . - 0 ID=cds2701;Parent=gene2830;Dbxref=NCBI_GP:AEF84946.1;Name=AEF84946.1;Note=identified by match to protein family HMM PF01875;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84946.1;transl_table=11 CP001843.1 Genbank gene 3147887 3149371 . - . ID=gene2831;Name=TREPR_1171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1171 CP001843.1 Genbank CDS 3147887 3149371 . - 0 ID=cds2702;Parent=gene2831;Dbxref=NCBI_GP:AEF84781.1;Name=AEF84781.1;Note=identified by match to protein family HMM PF05670%3B match to protein family HMM PF05833;gbkey=CDS;product=putative fibronectin/fibrinogen-binding protein;protein_id=AEF84781.1;transl_table=11 CP001843.1 Genbank gene 3149405 3150583 . + . ID=gene2832;Name=TREPR_1170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1170 CP001843.1 Genbank CDS 3149405 3150583 . + 0 ID=cds2703;Parent=gene2832;Dbxref=NCBI_GP:AEF84018.1;Name=AEF84018.1;Note=identified by match to protein family HMM PF00933;gbkey=CDS;product=beta-N-acetylhexosaminidase;protein_id=AEF84018.1;transl_table=11 CP001843.1 Genbank gene 3150585 3151271 . + . ID=gene2833;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=TREPR_1169 CP001843.1 Genbank CDS 3150585 3151271 . + 0 ID=cds2704;Parent=gene2833;Dbxref=NCBI_GP:AEF85854.1;Name=AEF85854.1;Note=identified by match to protein family HMM PF00849;gbkey=CDS;gene=rluC;product=ribosomal large subunit pseudouridine synthase family protein;protein_id=AEF85854.1;transl_table=11 CP001843.1 Genbank gene 3151299 3152936 . - . ID=gene2834;Name=TREPR_1168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1168 CP001843.1 Genbank CDS 3151299 3152936 . - 0 ID=cds2705;Parent=gene2834;Dbxref=NCBI_GP:AEF85557.1;Name=AEF85557.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85557.1;transl_table=11 CP001843.1 Genbank gene 3153043 3153927 . - . ID=gene2835;Name=TREPR_1167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1167 CP001843.1 Genbank CDS 3153043 3153927 . - 0 ID=cds2706;Parent=gene2835;Dbxref=NCBI_GP:AEF84376.1;Name=AEF84376.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84376.1;transl_table=11 CP001843.1 Genbank gene 3154027 3154710 . + . ID=gene2836;Name=TREPR_1166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1166 CP001843.1 Genbank CDS 3154027 3154710 . + 0 ID=cds2707;Parent=gene2836;Dbxref=NCBI_GP:AEF86706.1;Name=AEF86706.1;Note=identified by match to protein family HMM PF04474;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86706.1;transl_table=11 CP001843.1 Genbank gene 3154821 3155282 . + . ID=gene2837;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=TREPR_1165 CP001843.1 Genbank CDS 3154821 3155282 . + 0 ID=cds2708;Parent=gene2837;Dbxref=NCBI_GP:AEF85402.1;Name=AEF85402.1;Note=identified by match to protein family HMM PF02561%3B match to protein family HMM TIGR00208;gbkey=CDS;gene=fliS;product=flagellar protein FliS;protein_id=AEF85402.1;transl_table=11 CP001843.1 Genbank gene 3155514 3155762 . + . ID=gene2838;Name=TREPR_1164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1164 CP001843.1 Genbank CDS 3155514 3155762 . + 0 ID=cds2709;Parent=gene2838;Dbxref=NCBI_GP:AEF85159.1;Name=AEF85159.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85159.1;transl_table=11 CP001843.1 Genbank gene 3155818 3156054 . + . ID=gene2839;Name=TREPR_1163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1163 CP001843.1 Genbank CDS 3155818 3156054 . + 0 ID=cds2710;Parent=gene2839;Dbxref=NCBI_GP:AEF83877.1;Name=AEF83877.1;Note=identified by match to protein family HMM TIGR01552;gbkey=CDS;product=conserved domain protein;protein_id=AEF83877.1;transl_table=11 CP001843.1 Genbank gene 3156051 3156464 . + . ID=gene2840;Name=TREPR_1162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1162 CP001843.1 Genbank CDS 3156051 3156464 . + 0 ID=cds2711;Parent=gene2840;Dbxref=NCBI_GP:AEF86197.1;Name=AEF86197.1;gbkey=CDS;product=toxin of toxin-antitoxin;protein_id=AEF86197.1;transl_table=11 CP001843.1 Genbank gene 3156555 3156701 . - . ID=gene2841;Name=TREPR_1161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1161 CP001843.1 Genbank CDS 3156555 3156701 . - 0 ID=cds2712;Parent=gene2841;Dbxref=NCBI_GP:AEF84944.1;Name=AEF84944.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84944.1;transl_table=11 CP001843.1 Genbank gene 3156841 3157095 . + . ID=gene2842;Name=TREPR_1159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1159 CP001843.1 Genbank CDS 3156841 3157095 . + 0 ID=cds2713;Parent=gene2842;Dbxref=NCBI_GP:AEF86161.1;Name=AEF86161.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86161.1;transl_table=11 CP001843.1 Genbank gene 3157113 3157250 . - . ID=gene2843;Name=TREPR_1158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1158 CP001843.1 Genbank CDS 3157113 3157250 . - 0 ID=cds2714;Parent=gene2843;Dbxref=NCBI_GP:AEF86951.1;Name=AEF86951.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86951.1;transl_table=11 CP001843.1 Genbank gene 3157271 3157897 . - . ID=gene2844;Name=TREPR_1157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1157 CP001843.1 Genbank CDS 3157271 3157897 . - 0 ID=cds2715;Parent=gene2844;Dbxref=NCBI_GP:AEF84179.1;Name=AEF84179.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84179.1;transl_table=11 CP001843.1 Genbank gene 3157925 3158053 . - . ID=gene2845;Name=TREPR_1156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1156 CP001843.1 Genbank CDS 3157925 3158053 . - 0 ID=cds2716;Parent=gene2845;Dbxref=NCBI_GP:AEF84738.1;Name=AEF84738.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84738.1;transl_table=11 CP001843.1 Genbank gene 3158109 3158525 . - . ID=gene2846;Name=TREPR_1155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1155 CP001843.1 Genbank CDS 3158109 3158525 . - 0 ID=cds2717;Parent=gene2846;Dbxref=NCBI_GP:AEF85534.1;Name=AEF85534.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85534.1;transl_table=11 CP001843.1 Genbank gene 3158712 3159626 . - . ID=gene2847;Name=TREPR_1154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1154 CP001843.1 Genbank CDS 3158712 3159626 . - 0 ID=cds2718;Parent=gene2847;Dbxref=NCBI_GP:AEF86484.1;Name=AEF86484.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86484.1;transl_table=11 CP001843.1 Genbank gene 3159743 3161200 . - . ID=gene2848;Name=TREPR_1153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1153 CP001843.1 Genbank CDS 3159743 3161200 . - 0 ID=cds2719;Parent=gene2848;Dbxref=NCBI_GP:AEF83531.1;Name=AEF83531.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874;gbkey=CDS;product=V-type sodium ATP synthase%2C B subunit;protein_id=AEF83531.1;transl_table=11 CP001843.1 Genbank gene 3161231 3163045 . - . ID=gene2849;Name=TREPR_1152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1152 CP001843.1 Genbank CDS 3161231 3163045 . - 0 ID=cds2720;Parent=gene2849;Dbxref=NCBI_GP:AEF86107.1;Name=AEF86107.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874;gbkey=CDS;product=V-type sodium ATP synthase%2C A subunit;protein_id=AEF86107.1;transl_table=11 CP001843.1 Genbank gene 3163042 3163743 . - . ID=gene2850;Name=TREPR_1151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1151 CP001843.1 Genbank CDS 3163042 3163743 . - 0 ID=cds2721;Parent=gene2850;Dbxref=NCBI_GP:AEF86898.1;Name=AEF86898.1;gbkey=CDS;product=putative V-type ATPase%2C subunit E;protein_id=AEF86898.1;transl_table=11 CP001843.1 Genbank gene 3163762 3164106 . - . ID=gene2851;Name=TREPR_1150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1150 CP001843.1 Genbank CDS 3163762 3164106 . - 0 ID=cds2722;Parent=gene2851;Dbxref=NCBI_GP:AEF84135.1;Name=AEF84135.1;gbkey=CDS;product=putative V-type ATPase%2C subunit F;protein_id=AEF84135.1;transl_table=11 CP001843.1 Genbank gene 3164106 3164417 . - . ID=gene2852;Name=TREPR_1149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1149 CP001843.1 Genbank CDS 3164106 3164417 . - 0 ID=cds2723;Parent=gene2852;Dbxref=NCBI_GP:AEF84670.1;Name=AEF84670.1;Note=identified by match to protein family HMM PF00137;gbkey=CDS;product=H-ATPase-like protein;protein_id=AEF84670.1;transl_table=11 CP001843.1 Genbank gene 3164420 3166483 . - . ID=gene2853;Name=TREPR_1148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1148 CP001843.1 Genbank CDS 3164420 3166483 . - 0 ID=cds2724;Parent=gene2853;Dbxref=NCBI_GP:AEF83935.1;Name=AEF83935.1;Note=identified by match to protein family HMM PF01496;gbkey=CDS;product=V-type ATP synthase subunit I 2 (V-type ATPase subunit I2);protein_id=AEF83935.1;transl_table=11 CP001843.1 Genbank gene 3166518 3167597 . - . ID=gene2854;Name=TREPR_1147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1147 CP001843.1 Genbank CDS 3166518 3167597 . - 0 ID=cds2725;Parent=gene2854;Dbxref=NCBI_GP:AEF85933.1;Name=AEF85933.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85933.1;transl_table=11 CP001843.1 Genbank gene 3167597 3168010 . - . ID=gene2855;Name=TREPR_1146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1146 CP001843.1 Genbank CDS 3167597 3168010 . - 0 ID=cds2726;Parent=gene2855;Dbxref=NCBI_GP:AEF85127.1;Name=AEF85127.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85127.1;transl_table=11 CP001843.1 Genbank gene 3168035 3168508 . - . ID=gene2856;Name=TREPR_1145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1145 CP001843.1 Genbank CDS 3168035 3168508 . - 0 ID=cds2727;Parent=gene2856;Dbxref=NCBI_GP:AEF84360.1;Name=AEF84360.1;Note=identified by match to protein family HMM PF00359;gbkey=CDS;product=phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 domain protein;protein_id=AEF84360.1;transl_table=11 CP001843.1 Genbank gene 3168524 3168910 . - . ID=gene2857;Name=TREPR_1144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1144 CP001843.1 Genbank CDS 3168524 3168910 . - 0 ID=cds2728;Parent=gene2857;Dbxref=NCBI_GP:AEF86312.1;Name=AEF86312.1;Note=identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810;gbkey=CDS;product=translocase;protein_id=AEF86312.1;transl_table=11 CP001843.1 Genbank gene 3169236 3170240 . - . ID=gene2858;Name=TREPR_1143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1143 CP001843.1 Genbank CDS 3169236 3170240 . - 0 ID=cds2729;Parent=gene2858;Dbxref=NCBI_GP:AEF85489.1;Name=AEF85489.1;Note=identified by match to protein family HMM PF05930%3B match to protein family HMM TIGR01764;gbkey=CDS;product=molybdate-binding protein;protein_id=AEF85489.1;transl_table=11 CP001843.1 Genbank gene 3170262 3171314 . - . ID=gene2859;Name=TREPR_1142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1142 CP001843.1 Genbank CDS 3170262 3171314 . - 0 ID=cds2730;Parent=gene2859;Dbxref=NCBI_GP:AEF84766.1;Name=AEF84766.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84766.1;transl_table=11 CP001843.1 Genbank gene 3171311 3172183 . - . ID=gene2860;Name=TREPR_1141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1141 CP001843.1 Genbank CDS 3171311 3172183 . - 0 ID=cds2731;Parent=gene2860;Dbxref=NCBI_GP:AEF86686.1;Name=AEF86686.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter%2C ATP-binding protein;protein_id=AEF86686.1;transl_table=11 CP001843.1 Genbank gene 3172176 3172889 . - . ID=gene2861;Name=TREPR_1140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1140 CP001843.1 Genbank CDS 3172176 3172889 . - 0 ID=cds2732;Parent=gene2861;Dbxref=NCBI_GP:AEF85942.1;Name=AEF85942.1;gbkey=CDS;product=cobalamin synthesis protein%2C P47K;protein_id=AEF85942.1;transl_table=11 CP001843.1 Genbank gene 3172886 3173587 . - . ID=gene2862;Name=TREPR_1139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1139 CP001843.1 Genbank CDS 3172886 3173587 . - 0 ID=cds2733;Parent=gene2862;Dbxref=NCBI_GP:AEF86055.1;Name=AEF86055.1;Note=identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;product=methyltransferase type 11;protein_id=AEF86055.1;transl_table=11 CP001843.1 Genbank gene 3173864 3175609 . + . ID=gene2863;Name=TREPR_1138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1138 CP001843.1 Genbank CDS 3173864 3175609 . + 0 ID=cds2734;Parent=gene2863;Dbxref=NCBI_GP:AEF87021.1;Name=AEF87021.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF87021.1;transl_table=11 CP001843.1 Genbank gene 3175635 3177710 . + . ID=gene2864;Name=TREPR_1136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1136 CP001843.1 Genbank CDS 3175635 3177710 . + 0 ID=cds2735;Parent=gene2864;Dbxref=NCBI_GP:AEF84458.1;Name=AEF84458.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84458.1;transl_table=11 CP001843.1 Genbank gene 3177664 3177795 . - . ID=gene2865;Name=TREPR_1137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1137 CP001843.1 Genbank CDS 3177664 3177795 . - 0 ID=cds2736;Parent=gene2865;Dbxref=NCBI_GP:AEF83622.1;Name=AEF83622.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83622.1;transl_table=11 CP001843.1 Genbank gene 3177839 3180271 . + . ID=gene2866;Name=TREPR_1135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1135 CP001843.1 Genbank CDS 3177839 3180271 . + 0 ID=cds2737;Parent=gene2866;Dbxref=NCBI_GP:AEF86739.1;Name=AEF86739.1;Note=identified by match to protein family HMM PF02368;gbkey=CDS;product=Ig domain protein%2C group 2 domain protein;protein_id=AEF86739.1;transl_table=11 CP001843.1 Genbank gene 3180348 3182177 . + . ID=gene2867;Name=TREPR_1134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1134 CP001843.1 Genbank CDS 3180348 3182177 . + 0 ID=cds2738;Parent=gene2867;Dbxref=NCBI_GP:AEF86457.1;Name=AEF86457.1;Note=identified by match to protein family HMM PF00041;gbkey=CDS;product=fibronectin type III domain protein;protein_id=AEF86457.1;transl_table=11 CP001843.1 Genbank gene 3182226 3184259 . + . ID=gene2868;Name=TREPR_1133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1133 CP001843.1 Genbank CDS 3182226 3184259 . + 0 ID=cds2739;Parent=gene2868;Dbxref=NCBI_GP:AEF85169.1;Name=AEF85169.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;product=putative TonB-dependent receptor;protein_id=AEF85169.1;transl_table=11 CP001843.1 Genbank gene 3184276 3185040 . - . ID=gene2869;Name=TREPR_1132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1132 CP001843.1 Genbank CDS 3184276 3185040 . - 0 ID=cds2740;Parent=gene2869;Dbxref=NCBI_GP:AEF85808.1;Name=AEF85808.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85808.1;transl_table=11 CP001843.1 Genbank gene 3185309 3186022 . + . ID=gene2870;Name=TREPR_1131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1131 CP001843.1 Genbank CDS 3185309 3186022 . + 0 ID=cds2741;Parent=gene2870;Dbxref=NCBI_GP:AEF84922.1;Name=AEF84922.1;Note=identified by match to protein family HMM PF03544%3B match to protein family HMM TIGR01352;gbkey=CDS;product=TonB family C- domain protein;protein_id=AEF84922.1;transl_table=11 CP001843.1 Genbank gene 3186142 3187281 . + . ID=gene2871;Name=TREPR_1130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1130 CP001843.1 Genbank CDS 3186142 3187281 . + 0 ID=cds2742;Parent=gene2871;Dbxref=NCBI_GP:AEF86124.1;Name=AEF86124.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=periplasmic binding protein;protein_id=AEF86124.1;transl_table=11 CP001843.1 Genbank gene 3187289 3188323 . + . ID=gene2872;Name=TREPR_1129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1129 CP001843.1 Genbank CDS 3187289 3188323 . + 0 ID=cds2743;Parent=gene2872;Dbxref=NCBI_GP:AEF86354.1;Name=AEF86354.1;Note=identified by match to protein family HMM PF00950%3B match to protein family HMM PF01032;gbkey=CDS;product=iron compounds ABC transporter%2C permease protein;protein_id=AEF86354.1;transl_table=11 CP001843.1 Genbank gene 3188317 3189162 . + . ID=gene2873;Name=TREPR_1128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1128 CP001843.1 Genbank CDS 3188317 3189162 . + 0 ID=cds2744;Parent=gene2873;Dbxref=NCBI_GP:AEF85399.1;Name=AEF85399.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=hemin import ATP-binding protein HmuV;protein_id=AEF85399.1;transl_table=11 CP001843.1 Genbank gene 3189210 3189854 . - . ID=gene2874;Name=TREPR_1127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1127 CP001843.1 Genbank CDS 3189210 3189854 . - 0 ID=cds2745;Parent=gene2874;Dbxref=NCBI_GP:AEF85757.1;Name=AEF85757.1;Note=identified by match to protein family HMM PF00571;gbkey=CDS;product=CBS domain protein;protein_id=AEF85757.1;transl_table=11 CP001843.1 Genbank gene 3189856 3190560 . - . ID=gene2875;Name=TREPR_1126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1126 CP001843.1 Genbank CDS 3189856 3190560 . - 0 ID=cds2746;Parent=gene2875;Dbxref=NCBI_GP:AEF85219.1;Name=AEF85219.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=branched-chain amino acid ABC transporter;protein_id=AEF85219.1;transl_table=11 CP001843.1 Genbank gene 3190553 3191359 . - . ID=gene2876;Name=TREPR_1125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1125 CP001843.1 Genbank CDS 3190553 3191359 . - 0 ID=cds2747;Parent=gene2876;Dbxref=NCBI_GP:AEF84801.1;Name=AEF84801.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=branched-chain amino acid ABC transporter;protein_id=AEF84801.1;transl_table=11 CP001843.1 Genbank gene 3191349 3192344 . - . ID=gene2877;Name=TREPR_1124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1124 CP001843.1 Genbank CDS 3191349 3192344 . - 0 ID=cds2748;Parent=gene2877;Dbxref=NCBI_GP:AEF83787.1;Name=AEF83787.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=high-affinity branched-chain amino acid transport system permease protein LivM;protein_id=AEF83787.1;transl_table=11 CP001843.1 Genbank gene 3192346 3193245 . - . ID=gene2878;Name=TREPR_1123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1123 CP001843.1 Genbank CDS 3192346 3193245 . - 0 ID=cds2749;Parent=gene2878;Dbxref=NCBI_GP:AEF86348.1;Name=AEF86348.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=inner-membrane translocator;protein_id=AEF86348.1;transl_table=11 CP001843.1 Genbank gene 3193266 3194456 . - . ID=gene2879;Name=TREPR_1122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1122 CP001843.1 Genbank CDS 3193266 3194456 . - 0 ID=cds2750;Parent=gene2879;Dbxref=NCBI_GP:AEF85342.1;Name=AEF85342.1;Note=identified by match to protein family HMM PF01094;gbkey=CDS;product=extracellular ligand-binding receptor;protein_id=AEF85342.1;transl_table=11 CP001843.1 Genbank gene 3194547 3196250 . - . ID=gene2880;Name=TREPR_1121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1121 CP001843.1 Genbank CDS 3194547 3196250 . - 0 ID=cds2751;Parent=gene2880;Dbxref=NCBI_GP:AEF85099.1;Name=AEF85099.1;Note=identified by match to protein family HMM PF03321;gbkey=CDS;product=GH3 auxin-responsive promoter superfamily;protein_id=AEF85099.1;transl_table=11 CP001843.1 Genbank gene 3196603 3198747 . - . ID=gene2881;Name=TREPR_1120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1120 CP001843.1 Genbank CDS 3196603 3198747 . - 0 ID=cds2752;Parent=gene2881;Dbxref=NCBI_GP:AEF86282.1;Name=AEF86282.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86282.1;transl_table=11 CP001843.1 Genbank gene 3198879 3199442 . - . ID=gene2882;Name=fliL_2;gbkey=Gene;gene=fliL_2;gene_biotype=protein_coding;locus_tag=TREPR_1119 CP001843.1 Genbank CDS 3198879 3199442 . - 0 ID=cds2753;Parent=gene2882;Dbxref=NCBI_GP:AEF84879.1;Name=AEF84879.1;Note=identified by match to protein family HMM PF03748;gbkey=CDS;gene=fliL_2;product=flagellar basal body-associated protein FliL;protein_id=AEF84879.1;transl_table=11 CP001843.1 Genbank gene 3199445 3200464 . - . ID=gene2883;Name=TREPR_1118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1118 CP001843.1 Genbank CDS 3199445 3200464 . - 0 ID=cds2754;Parent=gene2883;Dbxref=NCBI_GP:AEF83977.1;Name=AEF83977.1;Note=identified by match to protein family HMM PF00924;gbkey=CDS;product=MscS Mechanosensitive ion channel;protein_id=AEF83977.1;transl_table=11 CP001843.1 Genbank gene 3200552 3200896 . + . ID=gene2884;Name=TREPR_1117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1117 CP001843.1 Genbank CDS 3200552 3200896 . + 0 ID=cds2755;Parent=gene2884;Dbxref=NCBI_GP:AEF86818.1;Name=AEF86818.1;Note=identified by match to protein family HMM PF07883;gbkey=CDS;product=cupin 2%2C conserved barrel;protein_id=AEF86818.1;transl_table=11 CP001843.1 Genbank gene 3200906 3202747 . + . ID=gene2885;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=TREPR_1116 CP001843.1 Genbank CDS 3200906 3202747 . + 0 ID=cds2756;Parent=gene2885;Dbxref=NCBI_GP:AEF86419.1;Name=AEF86419.1;Note=identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135;gbkey=CDS;gene=glmS;product=glutamine-fructose-6-phosphate transaminase (isomerizing);protein_id=AEF86419.1;transl_table=11 CP001843.1 Genbank gene 3202797 3203354 . + . ID=gene2886;Name=TREPR_1114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1114 CP001843.1 Genbank CDS 3202797 3203354 . + 0 ID=cds2757;Parent=gene2886;Dbxref=NCBI_GP:AEF83554.1;Name=AEF83554.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83554.1;transl_table=11 CP001843.1 Genbank gene 3203606 3203863 . - . ID=gene2887;Name=TREPR_1113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1113 CP001843.1 Genbank CDS 3203606 3203863 . - 0 ID=cds2758;Parent=gene2887;Dbxref=NCBI_GP:AEF86317.1;Name=AEF86317.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86317.1;transl_table=11 CP001843.1 Genbank gene 3203836 3204054 . - . ID=gene2888;Name=TREPR_1112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1112 CP001843.1 Genbank CDS 3203836 3204054 . - 0 ID=cds2759;Parent=gene2888;Dbxref=NCBI_GP:AEF85956.1;Name=AEF85956.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85956.1;transl_table=11 CP001843.1 Genbank gene 3204570 3204755 . - . ID=gene2889;Name=TREPR_1111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1111 CP001843.1 Genbank CDS 3204570 3204755 . - 0 ID=cds2760;Parent=gene2889;Dbxref=NCBI_GP:AEF85810.1;Name=AEF85810.1;gbkey=CDS;product=putative plasmid stability protein;protein_id=AEF85810.1;transl_table=11 CP001843.1 Genbank gene 3204968 3205240 . - . ID=gene2890;Name=TREPR_1110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1110 CP001843.1 Genbank CDS 3204968 3205240 . - 0 ID=cds2761;Parent=gene2890;Dbxref=NCBI_GP:AEF84929.1;Name=AEF84929.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84929.1;transl_table=11 CP001843.1 Genbank gene 3205298 3206416 . - . ID=gene2891;Name=TREPR_1109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1109 CP001843.1 Genbank CDS 3205298 3206416 . - 0 ID=cds2762;Parent=gene2891;Dbxref=NCBI_GP:AEF86692.1;Name=AEF86692.1;Note=identified by match to protein family HMM PF00248;gbkey=CDS;product=aldo/keto reductase;protein_id=AEF86692.1;transl_table=11 CP001843.1 Genbank gene 3206617 3207663 . + . ID=gene2892;Name=TREPR_1108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1108 CP001843.1 Genbank CDS 3206617 3207663 . + 0 ID=cds2763;Parent=gene2892;Dbxref=NCBI_GP:AEF84377.1;Name=AEF84377.1;Note=identified by match to protein family HMM PF01212;gbkey=CDS;product=L-allo-threonine aldolase (L-allo-TA) (L-allo-threonineacetaldehyde-lyase);protein_id=AEF84377.1;transl_table=11 CP001843.1 Genbank gene 3207660 3208817 . + . ID=gene2893;Name=TREPR_1107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1107 CP001843.1 Genbank CDS 3207660 3208817 . + 0 ID=cds2764;Parent=gene2893;Dbxref=NCBI_GP:AEF85165.1;Name=AEF85165.1;Note=identified by match to protein family HMM PF00557;gbkey=CDS;product=peptidase%2C M24 family;protein_id=AEF85165.1;transl_table=11 CP001843.1 Genbank gene 3208830 3209279 . - . ID=gene2894;Name=TREPR_1106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1106 CP001843.1 Genbank CDS 3208830 3209279 . - 0 ID=cds2765;Parent=gene2894;Dbxref=NCBI_GP:AEF86287.1;Name=AEF86287.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86287.1;transl_table=11 CP001843.1 Genbank gene 3209325 3210128 . - . ID=gene2895;Name=TREPR_1105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1105 CP001843.1 Genbank CDS 3209325 3210128 . - 0 ID=cds2766;Parent=gene2895;Dbxref=NCBI_GP:AEF86300.1;Name=AEF86300.1;gbkey=CDS;product=beta-lactamase domain protein;protein_id=AEF86300.1;transl_table=11 CP001843.1 Genbank gene 3210253 3211110 . - . ID=gene2896;Name=TREPR_1104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1104 CP001843.1 Genbank CDS 3210253 3211110 . - 0 ID=cds2767;Parent=gene2896;Dbxref=NCBI_GP:AEF83566.1;Name=AEF83566.1;Note=identified by match to protein family HMM PF08668;gbkey=CDS;product=HDOD domain protein;protein_id=AEF83566.1;transl_table=11 CP001843.1 Genbank gene 3211103 3212668 . - . ID=gene2897;Name=TREPR_1103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1103 CP001843.1 Genbank CDS 3211103 3212668 . - 0 ID=cds2768;Parent=gene2897;Dbxref=NCBI_GP:AEF84651.1;Name=AEF84651.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07721;gbkey=CDS;product=putative tetratricopeptide TPR_2;protein_id=AEF84651.1;transl_table=11 CP001843.1 Genbank gene 3212665 3214467 . - . ID=gene2898;Name=TREPR_1102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1102 CP001843.1 Genbank CDS 3212665 3214467 . - 0 ID=cds2769;Parent=gene2898;Dbxref=NCBI_GP:AEF85896.1;Name=AEF85896.1;Note=identified by match to protein family HMM PF00041;gbkey=CDS;product=fibronectin type III domain protein;protein_id=AEF85896.1;transl_table=11 CP001843.1 Genbank gene 3214451 3216496 . + . ID=gene2899;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=TREPR_1101 CP001843.1 Genbank CDS 3214451 3216496 . + 0 ID=cds2770;Parent=gene2899;Dbxref=NCBI_GP:AEF85845.1;Name=AEF85845.1;Note=identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194;gbkey=CDS;gene=uvrC;product=excinuclease ABC%2C C subunit;protein_id=AEF85845.1;transl_table=11 CP001843.1 Genbank gene 3216617 3216823 . + . ID=gene2900;Name=TREPR_1100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1100 CP001843.1 Genbank CDS 3216617 3216823 . + 0 ID=cds2771;Parent=gene2900;Dbxref=NCBI_GP:AEF86620.1;Name=AEF86620.1;Note=identified by match to protein family HMM PF03681;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86620.1;transl_table=11 CP001843.1 Genbank gene 3216835 3217158 . + . ID=gene2901;Name=TREPR_1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1099 CP001843.1 Genbank CDS 3216835 3217158 . + 0 ID=cds2772;Parent=gene2901;Dbxref=NCBI_GP:AEF85187.1;Name=AEF85187.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85187.1;transl_table=11 CP001843.1 Genbank gene 3217182 3218513 . - . ID=gene2902;Name=TREPR_1098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1098 CP001843.1 Genbank CDS 3217182 3218513 . - 0 ID=cds2773;Parent=gene2902;Dbxref=NCBI_GP:AEF84098.1;Name=AEF84098.1;Note=identified by match to protein family HMM PF09530%3B match to protein family HMM TIGR02221%3B match to protein family HMM TIGR02549;gbkey=CDS;product=putative crispr-associated protein%2C family;protein_id=AEF84098.1;transl_table=11 CP001843.1 Genbank gene 3218510 3219670 . - . ID=gene2903;Name=TREPR_1097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1097 CP001843.1 Genbank CDS 3218510 3219670 . - 0 ID=cds2774;Parent=gene2903;Dbxref=NCBI_GP:AEF84818.1;Name=AEF84818.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84818.1;transl_table=11 CP001843.1 Genbank gene 3219687 3220565 . - . ID=gene2904;Name=TREPR_1096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1096 CP001843.1 Genbank CDS 3219687 3220565 . - 0 ID=cds2775;Parent=gene2904;Dbxref=NCBI_GP:AEF86157.1;Name=AEF86157.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86157.1;transl_table=11 CP001843.1 Genbank gene 3220575 3221249 . - . ID=gene2905;Name=csm3;gbkey=Gene;gene=csm3;gene_biotype=protein_coding;locus_tag=TREPR_1095 CP001843.1 Genbank CDS 3220575 3221249 . - 0 ID=cds2776;Parent=gene2905;Dbxref=NCBI_GP:AEF86925.1;Name=AEF86925.1;Note=identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR02582;gbkey=CDS;gene=csm3;product=crispr-associated ramp protein%2C Csm3 family;protein_id=AEF86925.1;transl_table=11 CP001843.1 Genbank gene 3221279 3221770 . - . ID=gene2906;Name=TREPR_1094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1094 CP001843.1 Genbank CDS 3221279 3221770 . - 0 ID=cds2777;Parent=gene2906;Dbxref=NCBI_GP:AEF83656.1;Name=AEF83656.1;Note=identified by match to protein family HMM TIGR01870;gbkey=CDS;product=putative crispr-associated protein%2C Csm2 family;protein_id=AEF83656.1;transl_table=11 CP001843.1 Genbank gene 3221776 3223977 . - . ID=gene2907;Name=csm1;gbkey=Gene;gene=csm1;gene_biotype=protein_coding;locus_tag=TREPR_1093 CP001843.1 Genbank CDS 3221776 3223977 . - 0 ID=cds2778;Parent=gene2907;Dbxref=NCBI_GP:AEF84418.1;Name=AEF84418.1;Note=identified by match to protein family HMM TIGR02578;gbkey=CDS;gene=csm1;product=crispr-associated protein%2C Csm1 family;protein_id=AEF84418.1;transl_table=11 CP001843.1 Genbank gene 3223987 3224934 . - . ID=gene2908;Name=TREPR_1092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1092 CP001843.1 Genbank CDS 3223987 3224934 . - 0 ID=cds2779;Parent=gene2908;Dbxref=NCBI_GP:AEF85641.1;Name=AEF85641.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85641.1;transl_table=11 CP001843.1 Genbank gene 3226012 3227220 . + . ID=gene2909;Name=TREPR_1091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1091 CP001843.1 Genbank CDS 3226012 3227220 . + 0 ID=cds2780;Parent=gene2909;Dbxref=NCBI_GP:AEF86452.1;Name=AEF86452.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86452.1;transl_table=11 CP001843.1 Genbank gene 3227268 3227846 . - . ID=gene2910;Name=TREPR_1090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1090 CP001843.1 Genbank CDS 3227268 3227846 . - 0 ID=cds2781;Parent=gene2910;Dbxref=NCBI_GP:AEF83832.1;Name=AEF83832.1;Note=identified by match to protein family HMM PF05685;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83832.1;transl_table=11 CP001843.1 Genbank gene 3227980 3228702 . - . ID=gene2911;Name=TREPR_1089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1089 CP001843.1 Genbank CDS 3227980 3228702 . - 0 ID=cds2782;Parent=gene2911;Dbxref=NCBI_GP:AEF86393.1;Name=AEF86393.1;Note=identified by match to protein family HMM PF04620;gbkey=CDS;product=flagellar filament outer layer protein;protein_id=AEF86393.1;transl_table=11 CP001843.1 Genbank gene 3228715 3229446 . - . ID=gene2912;Name=TREPR_1088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1088 CP001843.1 Genbank CDS 3228715 3229446 . - 0 ID=cds2783;Parent=gene2912;Dbxref=NCBI_GP:AEF84950.1;Name=AEF84950.1;gbkey=CDS;product=outer membrane protein;protein_id=AEF84950.1;transl_table=11 CP001843.1 Genbank gene 3229589 3230515 . - . ID=gene2913;Name=TREPR_1087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1087 CP001843.1 Genbank CDS 3229589 3230515 . - 0 ID=cds2784;Parent=gene2913;Dbxref=NCBI_GP:AEF83983.1;Name=AEF83983.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83983.1;transl_table=11 CP001843.1 Genbank gene 3230677 3231675 . + . ID=gene2914;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=TREPR_1085 CP001843.1 Genbank CDS 3230677 3231675 . + 0 ID=cds2785;Parent=gene2914;Dbxref=NCBI_GP:AEF85955.1;Name=AEF85955.1;Note=identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01859;gbkey=CDS;gene=fba;product=fructose-1%2C6-bisphosphate aldolase%2C class II;protein_id=AEF85955.1;transl_table=11 CP001843.1 Genbank gene 3231799 3234069 . + . ID=gene2915;Name=TREPR_1084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1084 CP001843.1 Genbank CDS 3231799 3234069 . + 0 ID=cds2786;Parent=gene2915;Dbxref=NCBI_GP:AEF86257.1;Name=AEF86257.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86257.1;transl_table=11 CP001843.1 Genbank gene 3234117 3234803 . + . ID=gene2916;Name=TREPR_1083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1083 CP001843.1 Genbank CDS 3234117 3234803 . + 0 ID=cds2787;Parent=gene2916;Dbxref=NCBI_GP:AEF85506.1;Name=AEF85506.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85506.1;transl_table=11 CP001843.1 Genbank gene 3234816 3234947 . + . ID=gene2917;Name=TREPR_1082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1082 CP001843.1 Genbank CDS 3234816 3234947 . + 0 ID=cds2788;Parent=gene2917;Dbxref=NCBI_GP:AEF85073.1;Name=AEF85073.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85073.1;transl_table=11 CP001843.1 Genbank gene 3234980 3236032 . + . ID=gene2918;Name=TREPR_1081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1081 CP001843.1 Genbank CDS 3234980 3236032 . + 0 ID=cds2789;Parent=gene2918;Dbxref=NCBI_GP:AEF84374.1;Name=AEF84374.1;Note=identified by match to protein family HMM PF01569;gbkey=CDS;product=membrane-associated phospholipid phosphatase;protein_id=AEF84374.1;transl_table=11 CP001843.1 Genbank gene 3236035 3237513 . + . ID=gene2919;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;locus_tag=TREPR_1080 CP001843.1 Genbank CDS 3236035 3237513 . + 0 ID=cds2790;Parent=gene2919;Dbxref=NCBI_GP:AEF86653.1;Name=AEF86653.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450%3B match to protein family HMM TIGR00650;gbkey=CDS;gene=trmE;product=tRNA modification GTPase TrmE;protein_id=AEF86653.1;transl_table=11 CP001843.1 Genbank gene 3237517 3239424 . + . ID=gene2920;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=TREPR_1079 CP001843.1 Genbank CDS 3237517 3239424 . + 0 ID=cds2791;Parent=gene2920;Dbxref=NCBI_GP:AEF86832.1;Name=AEF86832.1;Note=identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136;gbkey=CDS;gene=gidA;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA;protein_id=AEF86832.1;transl_table=11 CP001843.1 Genbank gene 3239405 3239806 . + . ID=gene2921;Name=TREPR_1078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1078 CP001843.1 Genbank CDS 3239405 3239806 . + 0 ID=cds2792;Parent=gene2921;Dbxref=NCBI_GP:AEF84905.1;Name=AEF84905.1;Note=identified by match to protein family HMM PF02537%3B match to protein family HMM TIGR00494;gbkey=CDS;product=putative CrcB protein;protein_id=AEF84905.1;transl_table=11 CP001843.1 Genbank gene 3239984 3240328 . - . ID=gene2922;Name=TREPR_1076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1076 CP001843.1 Genbank CDS 3239984 3240328 . - 0 ID=cds2793;Parent=gene2922;Dbxref=NCBI_GP:AEF83662.1;Name=AEF83662.1;Note=identified by match to protein family HMM PF01230%3B adenosine 5'-monophosphoramidase%3B protein kinase c inhibitor 1%3B protein kinasec-interacting protein 1%3B pkci-1%3B 17 kda inhibitor of protein kinasec;gbkey=CDS;product=histidine triad nucleotide-binding protein 1;protein_id=AEF83662.1;transl_table=11 CP001843.1 Genbank gene 3240328 3241611 . - . ID=gene2923;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=TREPR_1075 CP001843.1 Genbank CDS 3240328 3241611 . - 0 ID=cds2794;Parent=gene2923;Dbxref=NCBI_GP:AEF86407.1;Name=AEF86407.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414;gbkey=CDS;gene=serS;product=serine--tRNA ligase;protein_id=AEF86407.1;transl_table=11 CP001843.1 Genbank gene 3241864 3242028 . + . ID=gene2924;Name=TREPR_1073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1073 CP001843.1 Genbank CDS 3241864 3242028 . + 0 ID=cds2795;Parent=gene2924;Dbxref=NCBI_GP:AEF86146.1;Name=AEF86146.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86146.1;transl_table=11 CP001843.1 Genbank gene 3242028 3244127 . + . ID=gene2925;Name=TREPR_1072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1072 CP001843.1 Genbank CDS 3242028 3244127 . + 0 ID=cds2796;Parent=gene2925;Dbxref=NCBI_GP:AEF84859.1;Name=AEF84859.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84859.1;transl_table=11 CP001843.1 Genbank gene 3244140 3246974 . + . ID=gene2926;Name=TREPR_1071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1071 CP001843.1 Genbank CDS 3244140 3246974 . + 0 ID=cds2797;Parent=gene2926;Dbxref=NCBI_GP:AEF84138.1;Name=AEF84138.1;gbkey=CDS;product=surface antigen BspA;protein_id=AEF84138.1;transl_table=11 CP001843.1 Genbank gene 3247034 3251158 . - . ID=gene2927;Name=TREPR_1070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1070 CP001843.1 Genbank CDS 3247034 3251158 . - 0 ID=cds2798;Parent=gene2927;Dbxref=NCBI_GP:AEF86460.1;Name=AEF86460.1;Note=identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR01857;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=AEF86460.1;transl_table=11 CP001843.1 Genbank gene 3251370 3252497 . + . ID=gene2928;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=TREPR_1069 CP001843.1 Genbank CDS 3251370 3252497 . + 0 ID=cds2799;Parent=gene2928;Dbxref=NCBI_GP:AEF85812.1;Name=AEF85812.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092;gbkey=CDS;gene=ychF;product=GTP-binding protein YchF;protein_id=AEF85812.1;transl_table=11 CP001843.1 Genbank gene 3252510 3252956 . + . ID=gene2929;Name=TREPR_1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1068 CP001843.1 Genbank CDS 3252510 3252956 . + 0 ID=cds2800;Parent=gene2929;Dbxref=NCBI_GP:AEF86747.1;Name=AEF86747.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;product=cyclic nucleotide-binding protein;protein_id=AEF86747.1;transl_table=11 CP001843.1 Genbank gene 3252965 3254020 . - . ID=gene2930;Name=TREPR_1067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1067 CP001843.1 Genbank CDS 3252965 3254020 . - 0 ID=cds2801;Parent=gene2930;Dbxref=NCBI_GP:AEF84265.1;Name=AEF84265.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF00587;gbkey=CDS;product=putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(LysRS) (GX);protein_id=AEF84265.1;transl_table=11 CP001843.1 Genbank gene 3254033 3255478 . - . ID=gene2931;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=TREPR_1066 CP001843.1 Genbank CDS 3254033 3255478 . - 0 ID=cds2802;Parent=gene2931;Dbxref=NCBI_GP:AEF85177.1;Name=AEF85177.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01087;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=AEF85177.1;transl_table=11 CP001843.1 Genbank gene 3255539 3256567 . + . ID=gene2932;Name=TREPR_1065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1065 CP001843.1 Genbank CDS 3255539 3256567 . + 0 ID=cds2803;Parent=gene2932;Dbxref=NCBI_GP:AEF86255.1;Name=AEF86255.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86255.1;transl_table=11 CP001843.1 Genbank gene 3256714 3257361 . + . ID=gene2933;Name=TREPR_1064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1064 CP001843.1 Genbank CDS 3256714 3257361 . + 0 ID=cds2804;Parent=gene2933;Dbxref=NCBI_GP:AEF83847.1;Name=AEF83847.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83847.1;transl_table=11 CP001843.1 Genbank gene 3257419 3259002 . - . ID=gene2934;Name=TREPR_1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1063 CP001843.1 Genbank CDS 3257419 3259002 . - 0 ID=cds2805;Parent=gene2934;Dbxref=NCBI_GP:AEF84744.1;Name=AEF84744.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085;gbkey=CDS;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=AEF84744.1;transl_table=11 CP001843.1 Genbank gene 3259127 3260800 . + . ID=gene2935;Name=TREPR_1062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1062 CP001843.1 Genbank CDS 3259127 3260800 . + 0 ID=cds2806;Parent=gene2935;Dbxref=NCBI_GP:AEF85755.1;Name=AEF85755.1;Note=identified by match to protein family HMM PF01078%3B match to protein family HMM TIGR00368;gbkey=CDS;product=Mg chelatase-like protein;protein_id=AEF85755.1;transl_table=11 CP001843.1 Genbank gene 3260832 3261392 . - . ID=gene2936;Name=TREPR_1061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1061 CP001843.1 Genbank CDS 3260832 3261392 . - 0 ID=cds2807;Parent=gene2936;Dbxref=NCBI_GP:AEF86753.1;Name=AEF86753.1;Note=identified by match to protein family HMM PF01184;gbkey=CDS;product=membrane protein%2C GPR1/FUN34/YaaH family;protein_id=AEF86753.1;transl_table=11 CP001843.1 Genbank gene 3261403 3261519 . - . ID=gene2937;Name=TREPR_1060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1060 CP001843.1 Genbank CDS 3261403 3261519 . - 0 ID=cds2808;Parent=gene2937;Dbxref=NCBI_GP:AEF86252.1;Name=AEF86252.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86252.1;transl_table=11 CP001843.1 Genbank gene 3261541 3262461 . + . ID=gene2938;Name=TREPR_1059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1059 CP001843.1 Genbank CDS 3261541 3262461 . + 0 ID=cds2809;Parent=gene2938;Dbxref=NCBI_GP:AEF86881.1;Name=AEF86881.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;product=transporter;protein_id=AEF86881.1;transl_table=11 CP001843.1 Genbank gene 3262454 3263671 . + . ID=gene2939;Name=TREPR_1058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1058 CP001843.1 Genbank CDS 3262454 3263671 . + 0 ID=cds2810;Parent=gene2939;Dbxref=NCBI_GP:AEF86061.1;Name=AEF86061.1;Note=identified by match to protein family HMM PF01986%3B match to protein family HMM PF03749%3B match to protein family HMM TIGR00230;gbkey=CDS;product=putative transcriptional regulator;protein_id=AEF86061.1;transl_table=11 CP001843.1 Genbank gene 3264103 3265707 . + . ID=gene2940;Name=TREPR_1057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1057 CP001843.1 Genbank CDS 3264103 3265707 . + 0 ID=cds2811;Parent=gene2940;Dbxref=NCBI_GP:AEF83697.1;Name=AEF83697.1;Note=identified by match to protein family HMM PF09479%3B match to protein family HMM TIGR02543;gbkey=CDS;product=repeat protein;protein_id=AEF83697.1;transl_table=11 CP001843.1 Genbank gene 3266072 3266845 . - . ID=gene2941;Name=TREPR_1055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1055 CP001843.1 Genbank CDS 3266072 3266845 . - 0 ID=cds2812;Parent=gene2941;Dbxref=NCBI_GP:AEF85718.1;Name=AEF85718.1;Note=identified by match to protein family HMM PF00849;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=AEF85718.1;transl_table=11 CP001843.1 Genbank gene 3266855 3270067 . - . ID=gene2942;Name=TREPR_1054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1054 CP001843.1 Genbank CDS 3266855 3270067 . - 0 ID=cds2813;Parent=gene2942;Dbxref=NCBI_GP:AEF84704.1;Name=AEF84704.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=sensory box histidine kinase/response regulator;protein_id=AEF84704.1;transl_table=11 CP001843.1 Genbank gene 3270082 3270582 . - . ID=gene2943;Name=TREPR_1053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1053 CP001843.1 Genbank CDS 3270082 3270582 . - 0 ID=cds2814;Parent=gene2943;Dbxref=NCBI_GP:AEF83981.1;Name=AEF83981.1;gbkey=CDS;product=major membrane immunogen;protein_id=AEF83981.1;transl_table=11 CP001843.1 Genbank gene 3270572 3271651 . - . ID=gene2944;Name=TREPR_1052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1052 CP001843.1 Genbank CDS 3270572 3271651 . - 0 ID=cds2815;Parent=gene2944;Dbxref=NCBI_GP:AEF86937.1;Name=AEF86937.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86937.1;transl_table=11 CP001843.1 Genbank gene 3271809 3272324 . + . ID=gene2945;Name=TREPR_1050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1050 CP001843.1 Genbank CDS 3271809 3272324 . + 0 ID=cds2816;Parent=gene2945;Dbxref=NCBI_GP:AEF84860.1;Name=AEF84860.1;Note=identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534;gbkey=CDS;product=thiol peroxidase;protein_id=AEF84860.1;transl_table=11 CP001843.1 Genbank gene 3272840 3272968 . - . ID=gene2946;Name=TREPR_1049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1049 CP001843.1 Genbank CDS 3272840 3272968 . - 0 ID=cds2817;Parent=gene2946;Dbxref=NCBI_GP:AEF83660.1;Name=AEF83660.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83660.1;transl_table=11 CP001843.1 Genbank gene 3273158 3273286 . - . ID=gene2947;Name=TREPR_1048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1048 CP001843.1 Genbank CDS 3273158 3273286 . - 0 ID=cds2818;Parent=gene2947;Dbxref=NCBI_GP:AEF87031.1;Name=AEF87031.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF87031.1;transl_table=11 CP001843.1 Genbank gene 3273504 3274073 . + . ID=gene2948;Name=TREPR_1047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1047 CP001843.1 Genbank CDS 3273504 3274073 . + 0 ID=cds2819;Parent=gene2948;Dbxref=NCBI_GP:AEF84454.1;Name=AEF84454.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=ThlR%2C HTH transcriptional regulator TetR/AcrR family;protein_id=AEF84454.1;transl_table=11 CP001843.1 Genbank gene 3274122 3275171 . + . ID=gene2949;Name=TREPR_1046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1046 CP001843.1 Genbank CDS 3274122 3275171 . + 0 ID=cds2820;Parent=gene2949;Dbxref=NCBI_GP:AEF84856.1;Name=AEF84856.1;gbkey=CDS;product=4Fe-4S ferredoxin%2C iron-sulfur binding protein;protein_id=AEF84856.1;transl_table=11 CP001843.1 Genbank gene 3275215 3275850 . + . ID=gene2950;Name=TREPR_1045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1045 CP001843.1 Genbank CDS 3275215 3275850 . + 0 ID=cds2821;Parent=gene2950;Dbxref=NCBI_GP:AEF84093.1;Name=AEF84093.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84093.1;transl_table=11 CP001843.1 Genbank gene 3275871 3276821 . - . ID=gene2951;Name=TREPR_1044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1044 CP001843.1 Genbank CDS 3275871 3276821 . - 0 ID=cds2822;Parent=gene2951;Dbxref=NCBI_GP:AEF85619.1;Name=AEF85619.1;Note=identified by match to protein family HMM PF07751;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85619.1;transl_table=11 CP001843.1 Genbank gene 3276934 3277092 . - . ID=gene2952;Name=TREPR_1043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1043 CP001843.1 Genbank CDS 3276934 3277092 . - 0 ID=cds2823;Parent=gene2952;Dbxref=NCBI_GP:AEF84915.1;Name=AEF84915.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84915.1;transl_table=11 CP001843.1 Genbank gene 3277673 3277840 . - . ID=gene2953;Name=TREPR_1042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1042 CP001843.1 Genbank CDS 3277673 3277840 . - 0 ID=cds2824;Parent=gene2953;Dbxref=NCBI_GP:AEF83696.1;Name=AEF83696.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83696.1;transl_table=11 CP001843.1 Genbank gene 3277981 3278607 . + . ID=gene2954;Name=TREPR_1041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1041 CP001843.1 Genbank CDS 3277981 3278607 . + 0 ID=cds2825;Parent=gene2954;Dbxref=NCBI_GP:AEF86538.1;Name=AEF86538.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=putative NADH dehydrogenase/nad(p)h nitroreductase;protein_id=AEF86538.1;transl_table=11 CP001843.1 Genbank gene 3278645 3278992 . - . ID=gene2955;Name=TREPR_1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1040 CP001843.1 Genbank CDS 3278645 3278992 . - 0 ID=cds2826;Parent=gene2955;Dbxref=NCBI_GP:AEF84435.1;Name=AEF84435.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=helix-turn-helix domain protein;protein_id=AEF84435.1;transl_table=11 CP001843.1 Genbank gene 3279000 3279233 . - . ID=gene2956;Name=TREPR_1039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1039 CP001843.1 Genbank CDS 3279000 3279233 . - 0 ID=cds2827;Parent=gene2956;Dbxref=NCBI_GP:AEF84689.1;Name=AEF84689.1;gbkey=CDS;product=transcriptional regulator%2C BadM/Rrf2 family;protein_id=AEF84689.1;transl_table=11 CP001843.1 Genbank gene 3279554 3281041 . - . ID=gene2957;Name=TREPR_1038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1038 CP001843.1 Genbank CDS 3279554 3281041 . - 0 ID=cds2828;Parent=gene2957;Dbxref=NCBI_GP:AEF84244.1;Name=AEF84244.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84244.1;transl_table=11 CP001843.1 Genbank gene 3281038 3281829 . - . ID=gene2958;Name=TREPR_1037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1037 CP001843.1 Genbank CDS 3281038 3281829 . - 0 ID=cds2829;Parent=gene2958;Dbxref=NCBI_GP:AEF86191.1;Name=AEF86191.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86191.1;transl_table=11 CP001843.1 Genbank gene 3281834 3284452 . - . ID=gene2959;Name=TREPR_1036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1036 CP001843.1 Genbank CDS 3281834 3284452 . - 0 ID=cds2830;Parent=gene2959;Dbxref=NCBI_GP:AEF85794.1;Name=AEF85794.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF85794.1;transl_table=11 CP001843.1 Genbank gene 3284561 3285229 . + . ID=gene2960;Name=TREPR_1035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1035 CP001843.1 Genbank CDS 3284561 3285229 . + 0 ID=cds2831;Parent=gene2960;Dbxref=NCBI_GP:AEF85101.1;Name=AEF85101.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=transcriptional regulator%2C TetR family;protein_id=AEF85101.1;transl_table=11 CP001843.1 Genbank gene 3285454 3286623 . + . ID=gene2961;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=TREPR_1033 CP001843.1 Genbank CDS 3285454 3286623 . + 0 ID=cds2832;Parent=gene2961;Dbxref=NCBI_GP:AEF86782.1;Name=AEF86782.1;Note=identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034;gbkey=CDS;gene=metK;product=methionine adenosyltransferase;protein_id=AEF86782.1;transl_table=11 CP001843.1 Genbank gene 3286720 3289389 . + . ID=gene2962;Name=TREPR_1032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1032 CP001843.1 Genbank CDS 3286720 3289389 . + 0 ID=cds2833;Parent=gene2962;Dbxref=NCBI_GP:AEF84547.1;Name=AEF84547.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84547.1;transl_table=11 CP001843.1 Genbank gene 3289425 3290579 . + . ID=gene2963;Name=TREPR_1031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1031 CP001843.1 Genbank CDS 3289425 3290579 . + 0 ID=cds2834;Parent=gene2963;Dbxref=NCBI_GP:AEF83579.1;Name=AEF83579.1;Note=identified by match to protein family HMM PF04151;gbkey=CDS;product=putative tyrosinase;protein_id=AEF83579.1;transl_table=11 CP001843.1 Genbank gene 3290592 3291017 . + . ID=gene2964;Name=TREPR_1030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1030 CP001843.1 Genbank CDS 3290592 3291017 . + 0 ID=cds2835;Parent=gene2964;Dbxref=NCBI_GP:AEF87028.1;Name=AEF87028.1;gbkey=CDS;product=class I peptide chain release factor;protein_id=AEF87028.1;transl_table=11 CP001843.1 Genbank gene 3291103 3292419 . + . ID=gene2965;Name=TREPR_1029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1029 CP001843.1 Genbank CDS 3291103 3292419 . + 0 ID=cds2836;Parent=gene2965;Dbxref=NCBI_GP:AEF84378.1;Name=AEF84378.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84378.1;transl_table=11 CP001843.1 Genbank gene 3292432 3293097 . + . ID=gene2966;Name=TREPR_1028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1028 CP001843.1 Genbank CDS 3292432 3293097 . + 0 ID=cds2837;Parent=gene2966;Dbxref=NCBI_GP:AEF86136.1;Name=AEF86136.1;Note=identified by match to protein family HMM PF00702;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=AEF86136.1;transl_table=11 CP001843.1 Genbank gene 3293103 3296222 . + . ID=gene2967;Name=TREPR_1027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1027 CP001843.1 Genbank CDS 3293103 3296222 . + 0 ID=cds2838;Parent=gene2967;Dbxref=NCBI_GP:AEF85133.1;Name=AEF85133.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85133.1;transl_table=11 CP001843.1 Genbank gene 3296227 3297018 . - . ID=gene2968;Name=TREPR_1026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1026 CP001843.1 Genbank CDS 3296227 3297018 . - 0 ID=cds2839;Parent=gene2968;Dbxref=NCBI_GP:AEF83677.1;Name=AEF83677.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730;gbkey=CDS;product=endonuclease III protein;protein_id=AEF83677.1;transl_table=11 CP001843.1 Genbank gene 3297029 3297502 . - . ID=gene2969;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=TREPR_1025 CP001843.1 Genbank CDS 3297029 3297502 . - 0 ID=cds2840;Parent=gene2969;Dbxref=NCBI_GP:AEF86220.1;Name=AEF86220.1;Note=identified by match to protein family HMM PF02542%3B match to protein family HMM TIGR00151;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=AEF86220.1;transl_table=11 CP001843.1 Genbank pseudogene 3297495 3298247 . - . ID=gene2970;Name=TREPR_1024;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF01128;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1024;pseudo=true CP001843.1 Genbank gene 3298257 3298760 . - . ID=gene2971;Name=TREPR_1023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1023 CP001843.1 Genbank CDS 3298257 3298760 . - 0 ID=cds2841;Parent=gene2971;Dbxref=NCBI_GP:AEF83758.1;Name=AEF83758.1;Note=identified by match to protein family HMM PF02559;gbkey=CDS;product=transcription factor;protein_id=AEF83758.1;transl_table=11 CP001843.1 Genbank gene 3298890 3301736 . - . ID=gene2972;Name=TREPR_1022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1022 CP001843.1 Genbank CDS 3298890 3301736 . - 0 ID=cds2842;Parent=gene2972;Dbxref=NCBI_GP:AEF84089.1;Name=AEF84089.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84089.1;transl_table=11 CP001843.1 Genbank gene 3301894 3303249 . - . ID=gene2973;Name=TREPR_1021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1021 CP001843.1 Genbank CDS 3301894 3303249 . - 0 ID=cds2843;Parent=gene2973;Dbxref=NCBI_GP:AEF86629.1;Name=AEF86629.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF86629.1;transl_table=11 CP001843.1 Genbank gene 3303518 3303775 . + . ID=gene2974;Name=TREPR_1020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1020 CP001843.1 Genbank CDS 3303518 3303775 . + 0 ID=cds2844;Parent=gene2974;Dbxref=NCBI_GP:AEF86666.1;Name=AEF86666.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86666.1;transl_table=11 CP001843.1 Genbank gene 3303793 3307449 . - . ID=gene2975;Name=TREPR_1019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1019 CP001843.1 Genbank CDS 3303793 3307449 . - 0 ID=cds2845;Parent=gene2975;Dbxref=NCBI_GP:AEF86403.1;Name=AEF86403.1;Note=identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271%3B match to protein family HMM PF04434%3B match to protein family HMM PF04851;gbkey=CDS;product=Snf2 family protein;protein_id=AEF86403.1;transl_table=11 CP001843.1 Genbank gene 3307594 3309042 . - . ID=gene2976;Name=TREPR_1018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1018 CP001843.1 Genbank CDS 3307594 3309042 . - 0 ID=cds2846;Parent=gene2976;Dbxref=NCBI_GP:AEF86663.1;Name=AEF86663.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86663.1;transl_table=11 CP001843.1 Genbank gene 3309248 3309499 . - . ID=gene2977;Name=TREPR_1017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1017 CP001843.1 Genbank CDS 3309248 3309499 . - 0 ID=cds2847;Parent=gene2977;Dbxref=NCBI_GP:AEF85904.1;Name=AEF85904.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85904.1;transl_table=11 CP001843.1 Genbank gene 3309531 3312632 . - . ID=gene2978;Name=TREPR_1016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1016 CP001843.1 Genbank CDS 3309531 3312632 . - 0 ID=cds2848;Parent=gene2978;Dbxref=NCBI_GP:AEF85106.1;Name=AEF85106.1;Note=identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193%3B match to protein family HMM PF08367;gbkey=CDS;product=peptidase%2C M16 family;protein_id=AEF85106.1;transl_table=11 CP001843.1 Genbank gene 3312629 3314323 . - . ID=gene2979;Name=TREPR_1015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1015 CP001843.1 Genbank CDS 3312629 3314323 . - 0 ID=cds2849;Parent=gene2979;Dbxref=NCBI_GP:AEF84326.1;Name=AEF84326.1;Note=identified by match to protein family HMM PF01706;gbkey=CDS;product=putative flagellar motor switch protein FliG;protein_id=AEF84326.1;transl_table=11 CP001843.1 Genbank gene 3314306 3315328 . + . ID=gene2980;Name=TREPR_1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1014 CP001843.1 Genbank CDS 3314306 3315328 . + 0 ID=cds2850;Parent=gene2980;Dbxref=NCBI_GP:AEF86078.1;Name=AEF86078.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;product=putative dihydroflavonol 4-reductase;protein_id=AEF86078.1;transl_table=11 CP001843.1 Genbank gene 3315328 3316092 . + . ID=gene2981;Name=TREPR_1013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1013 CP001843.1 Genbank CDS 3315328 3316092 . + 0 ID=cds2851;Parent=gene2981;Dbxref=NCBI_GP:AEF85325.1;Name=AEF85325.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=putative 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein;protein_id=AEF85325.1;transl_table=11 CP001843.1 Genbank gene 3316411 3317055 . + . ID=gene2982;Name=TREPR_1012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1012 CP001843.1 Genbank CDS 3316411 3317055 . + 0 ID=cds2852;Parent=gene2982;Dbxref=NCBI_GP:AEF84536.1;Name=AEF84536.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84536.1;transl_table=11 CP001843.1 Genbank gene 3317258 3318472 . + . ID=gene2983;Name=TREPR_1011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1011 CP001843.1 Genbank CDS 3317258 3318472 . + 0 ID=cds2853;Parent=gene2983;Dbxref=NCBI_GP:AEF83760.1;Name=AEF83760.1;Note=identified by match to protein family HMM PF00872;gbkey=CDS;product=transposase%2C Mutator family;protein_id=AEF83760.1;transl_table=11 CP001843.1 Genbank pseudogene 3318566 3319213 . - . ID=gene2984;Name=TREPR_1010;Note=transposase IS4 family protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1010;pseudo=true CP001843.1 Genbank gene 3319764 3319880 . + . ID=gene2985;Name=TREPR_1009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1009 CP001843.1 Genbank CDS 3319764 3319880 . + 0 ID=cds2854;Parent=gene2985;Dbxref=NCBI_GP:AEF86436.1;Name=AEF86436.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86436.1;transl_table=11 CP001843.1 Genbank pseudogene 3320163 3320324 . + . ID=gene2986;Name=TREPR_1007;Note=transposase%2C IS4 family protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_1007;pseudo=true CP001843.1 Genbank gene 3320402 3320929 . + . ID=gene2987;Name=TREPR_1006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1006 CP001843.1 Genbank CDS 3320402 3320929 . + 0 ID=cds2855;Parent=gene2987;Dbxref=NCBI_GP:AEF85479.1;Name=AEF85479.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85479.1;transl_table=11 CP001843.1 Genbank gene 3321404 3322855 . - . ID=gene2988;Name=TREPR_1005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1005 CP001843.1 Genbank CDS 3321404 3322855 . - 0 ID=cds2856;Parent=gene2988;Dbxref=NCBI_GP:AEF86773.1;Name=AEF86773.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86773.1;transl_table=11 CP001843.1 Genbank gene 3322984 3324237 . + . ID=gene2989;Name=TREPR_1004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1004 CP001843.1 Genbank CDS 3322984 3324237 . + 0 ID=cds2857;Parent=gene2989;Dbxref=NCBI_GP:AEF84025.1;Name=AEF84025.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84025.1;transl_table=11 CP001843.1 Genbank gene 3324338 3325015 . + . ID=gene2990;Name=TREPR_1003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1003 CP001843.1 Genbank CDS 3324338 3325015 . + 0 ID=cds2858;Parent=gene2990;Dbxref=NCBI_GP:AEF85558.1;Name=AEF85558.1;gbkey=CDS;product=putative recombination protein O;protein_id=AEF85558.1;transl_table=11 CP001843.1 Genbank gene 3325043 3326347 . + . ID=gene2991;Name=TREPR_1002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1002 CP001843.1 Genbank CDS 3325043 3326347 . + 0 ID=cds2859;Parent=gene2991;Dbxref=NCBI_GP:AEF85894.1;Name=AEF85894.1;Note=identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02644;gbkey=CDS;product=pyrimidine-nucleoside phosphorylase;protein_id=AEF85894.1;transl_table=11 CP001843.1 Genbank gene 3326382 3328526 . + . ID=gene2992;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=TREPR_1001 CP001843.1 Genbank CDS 3326382 3328526 . + 0 ID=cds2860;Parent=gene2992;Dbxref=NCBI_GP:AEF83651.1;Name=AEF83651.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644;gbkey=CDS;gene=recJ;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=AEF83651.1;transl_table=11 CP001843.1 Genbank gene 3328559 3329203 . - . ID=gene2993;Name=TREPR_1000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_1000 CP001843.1 Genbank CDS 3328559 3329203 . - 0 ID=cds2861;Parent=gene2993;Dbxref=NCBI_GP:AEF84846.1;Name=AEF84846.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84846.1;transl_table=11 CP001843.1 Genbank gene 3329338 3330504 . + . ID=gene2994;Name=TREPR_0999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0999 CP001843.1 Genbank CDS 3329338 3330504 . + 0 ID=cds2862;Parent=gene2994;Dbxref=NCBI_GP:AEF85807.1;Name=AEF85807.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;product=M23/M37 peptidase domain protein;protein_id=AEF85807.1;transl_table=11 CP001843.1 Genbank gene 3330600 3330812 . + . ID=gene2995;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=TREPR_0998 CP001843.1 Genbank CDS 3330600 3330812 . + 0 ID=cds2863;Parent=gene2995;Dbxref=NCBI_GP:AEF84282.1;Name=AEF84282.1;Note=identified by match to protein family HMM PF01165%3B match to protein family HMM TIGR00030;gbkey=CDS;gene=rpsU;product=ribosomal protein S21;protein_id=AEF84282.1;transl_table=11 CP001843.1 Genbank gene 3330852 3330968 . - . ID=gene2996;Name=TREPR_0997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0997 CP001843.1 Genbank CDS 3330852 3330968 . - 0 ID=cds2864;Parent=gene2996;Dbxref=NCBI_GP:AEF85274.1;Name=AEF85274.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85274.1;transl_table=11 CP001843.1 Genbank gene 3331123 3331788 . + . ID=gene2997;Name=TREPR_0996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0996 CP001843.1 Genbank CDS 3331123 3331788 . + 0 ID=cds2865;Parent=gene2997;Dbxref=NCBI_GP:AEF85300.1;Name=AEF85300.1;gbkey=CDS;product=secreted protein;protein_id=AEF85300.1;transl_table=11 CP001843.1 Genbank gene 3331785 3331976 . + . ID=gene2998;Name=TREPR_0994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0994 CP001843.1 Genbank CDS 3331785 3331976 . + 0 ID=cds2866;Parent=gene2998;Dbxref=NCBI_GP:AEF85800.1;Name=AEF85800.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85800.1;transl_table=11 CP001843.1 Genbank gene 3331946 3332911 . - . ID=gene2999;Name=TREPR_0995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0995 CP001843.1 Genbank CDS 3331946 3332911 . - 0 ID=cds2867;Parent=gene2999;Dbxref=NCBI_GP:AEF86307.1;Name=AEF86307.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86307.1;transl_table=11 CP001843.1 Genbank gene 3333307 3334653 . - . ID=gene3000;Name=TREPR_0993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0993 CP001843.1 Genbank CDS 3333307 3334653 . - 0 ID=cds2868;Parent=gene3000;Dbxref=NCBI_GP:AEF86632.1;Name=AEF86632.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;product=aminotransferase%2C class I and II;protein_id=AEF86632.1;transl_table=11 CP001843.1 Genbank gene 3334892 3335011 . - . ID=gene3001;Name=TREPR_0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0992 CP001843.1 Genbank CDS 3334892 3335011 . - 0 ID=cds2869;Parent=gene3001;Dbxref=NCBI_GP:AEF84302.1;Name=AEF84302.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84302.1;transl_table=11 CP001843.1 Genbank gene 3335187 3335861 . + . ID=gene3002;Name=TREPR_0991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0991 CP001843.1 Genbank CDS 3335187 3335861 . + 0 ID=cds2870;Parent=gene3002;Dbxref=NCBI_GP:AEF85153.1;Name=AEF85153.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85153.1;transl_table=11 CP001843.1 Genbank gene 3335858 3336019 . + . ID=gene3003;Name=TREPR_0990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0990 CP001843.1 Genbank CDS 3335858 3336019 . + 0 ID=cds2871;Parent=gene3003;Dbxref=NCBI_GP:AEF86041.1;Name=AEF86041.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86041.1;transl_table=11 CP001843.1 Genbank gene 3336020 3336838 . + . ID=gene3004;Name=accD_2;gbkey=Gene;gene=accD_2;gene_biotype=protein_coding;locus_tag=TREPR_0989 CP001843.1 Genbank CDS 3336020 3336838 . + 0 ID=cds2872;Parent=gene3004;Dbxref=NCBI_GP:AEF87023.1;Name=AEF87023.1;Note=identified by match to protein family HMM TIGR00515;gbkey=CDS;gene=accD_2;product=acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit;protein_id=AEF87023.1;transl_table=11 CP001843.1 Genbank gene 3336838 3337638 . + . ID=gene3005;Name=accA_2;gbkey=Gene;gene=accA_2;gene_biotype=protein_coding;locus_tag=TREPR_0988 CP001843.1 Genbank CDS 3336838 3337638 . + 0 ID=cds2873;Parent=gene3005;Dbxref=NCBI_GP:AEF85547.1;Name=AEF85547.1;Note=identified by match to protein family HMM PF03255%3B match to protein family HMM TIGR00513;gbkey=CDS;gene=accA_2;product=acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit;protein_id=AEF85547.1;transl_table=11 CP001843.1 Genbank gene 3337645 3339387 . - . ID=gene3006;Name=TREPR_0987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0987 CP001843.1 Genbank CDS 3337645 3339387 . - 0 ID=cds2874;Parent=gene3006;Dbxref=NCBI_GP:AEF86545.1;Name=AEF86545.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;product=AMP-dependent synthetase and ligase;protein_id=AEF86545.1;transl_table=11 CP001843.1 Genbank gene 3339389 3340798 . - . ID=gene3007;Name=TREPR_0986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0986 CP001843.1 Genbank CDS 3339389 3340798 . - 0 ID=cds2875;Parent=gene3007;Dbxref=NCBI_GP:AEF86874.1;Name=AEF86874.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=GGDEF/EAL/PAS/PAC domain protein;protein_id=AEF86874.1;transl_table=11 CP001843.1 Genbank gene 3341292 3341681 . + . ID=gene3008;Name=TREPR_0985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0985 CP001843.1 Genbank CDS 3341292 3341681 . + 0 ID=cds2876;Parent=gene3008;Dbxref=NCBI_GP:AEF84173.1;Name=AEF84173.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84173.1;transl_table=11 CP001843.1 Genbank gene 3341683 3342414 . + . ID=gene3009;Name=TREPR_0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0984 CP001843.1 Genbank CDS 3341683 3342414 . + 0 ID=cds2877;Parent=gene3009;Dbxref=NCBI_GP:AEF85915.1;Name=AEF85915.1;Note=identified by match to protein family HMM PF01925;gbkey=CDS;product=conserved domain protein;protein_id=AEF85915.1;transl_table=11 CP001843.1 Genbank gene 3342622 3343137 . + . ID=gene3010;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=TREPR_0983 CP001843.1 Genbank CDS 3342622 3343137 . + 0 ID=cds2878;Parent=gene3010;Dbxref=NCBI_GP:AEF86701.1;Name=AEF86701.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM TIGR00119;gbkey=CDS;gene=ilvN;product=acetolactate synthase%2C small subunit;protein_id=AEF86701.1;transl_table=11 CP001843.1 Genbank gene 3343254 3344255 . + . ID=gene3011;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=TREPR_0982 CP001843.1 Genbank CDS 3343254 3344255 . + 0 ID=cds2879;Parent=gene3011;Dbxref=NCBI_GP:AEF83915.1;Name=AEF83915.1;Note=identified by match to protein family HMM PF01450%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00465;gbkey=CDS;gene=ilvC;product=ketol-acid reductoisomerase;protein_id=AEF83915.1;transl_table=11 CP001843.1 Genbank gene 3344414 3345985 . + . ID=gene3012;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=TREPR_0981 CP001843.1 Genbank CDS 3344414 3345985 . + 0 ID=cds2880;Parent=gene3012;Dbxref=NCBI_GP:AEF84646.1;Name=AEF84646.1;Note=identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502%3B match to protein family HMM TIGR00973;gbkey=CDS;gene=leuA;product=2-isopropylmalate synthase;protein_id=AEF84646.1;transl_table=11 CP001843.1 Genbank gene 3345982 3347643 . + . ID=gene3013;Name=TREPR_0980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0980 CP001843.1 Genbank CDS 3345982 3347643 . + 0 ID=cds2881;Parent=gene3013;Dbxref=NCBI_GP:AEF84687.1;Name=AEF84687.1;Note=identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502%3B match to protein family HMM TIGR00977;gbkey=CDS;product=2-isopropylmalate synthase/homocitrate synthase family protein;protein_id=AEF84687.1;transl_table=11 CP001843.1 Genbank gene 3347658 3348791 . + . ID=gene3014;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=TREPR_0979 CP001843.1 Genbank CDS 3347658 3348791 . + 0 ID=cds2882;Parent=gene3014;Dbxref=NCBI_GP:AEF83931.1;Name=AEF83931.1;Note=identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00169;gbkey=CDS;gene=leuB;product=3-isopropylmalate dehydrogenase;protein_id=AEF83931.1;transl_table=11 CP001843.1 Genbank gene 3348985 3350646 . + . ID=gene3015;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=TREPR_0977 CP001843.1 Genbank CDS 3348985 3350646 . + 0 ID=cds2883;Parent=gene3015;Dbxref=NCBI_GP:AEF83865.1;Name=AEF83865.1;Note=identified by match to protein family HMM PF00920%3B match to protein family HMM TIGR00110;gbkey=CDS;gene=ilvD;product=dihydroxy-acid dehydratase;protein_id=AEF83865.1;transl_table=11 CP001843.1 Genbank gene 3350650 3352449 . + . ID=gene3016;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=TREPR_0976 CP001843.1 Genbank CDS 3350650 3352449 . + 0 ID=cds2884;Parent=gene3016;Dbxref=NCBI_GP:AEF86203.1;Name=AEF86203.1;Note=identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118;gbkey=CDS;gene=ilvB;product=acetolactate synthase%2C large subunit%2C biosynthetic type;protein_id=AEF86203.1;transl_table=11 CP001843.1 Genbank gene 3352433 3353461 . + . ID=gene3017;Name=TREPR_0974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0974 CP001843.1 Genbank CDS 3352433 3353461 . + 0 ID=cds2885;Parent=gene3017;Dbxref=NCBI_GP:AEF84867.1;Name=AEF84867.1;Note=identified by match to protein family HMM PF02424;gbkey=CDS;product=ApbE family protein;protein_id=AEF84867.1;transl_table=11 CP001843.1 Genbank gene 3353447 3353560 . - . ID=gene3018;Name=TREPR_0975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0975 CP001843.1 Genbank CDS 3353447 3353560 . - 0 ID=cds2886;Parent=gene3018;Dbxref=NCBI_GP:AEF85312.1;Name=AEF85312.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85312.1;transl_table=11 CP001843.1 Genbank gene 3353535 3354383 . - . ID=gene3019;Name=TREPR_0973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0973 CP001843.1 Genbank CDS 3353535 3354383 . - 0 ID=cds2887;Parent=gene3019;Dbxref=NCBI_GP:AEF84234.1;Name=AEF84234.1;gbkey=CDS;product=amidohydrolase family protein;protein_id=AEF84234.1;transl_table=11 CP001843.1 Genbank gene 3354380 3355693 . - . ID=gene3020;Name=TREPR_0972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0972 CP001843.1 Genbank CDS 3354380 3355693 . - 0 ID=cds2888;Parent=gene3020;Dbxref=NCBI_GP:AEF85572.1;Name=AEF85572.1;Note=identified by match to protein family HMM PF07456;gbkey=CDS;product=putative heptaprenyl diphosphate synthase component I;protein_id=AEF85572.1;transl_table=11 CP001843.1 Genbank gene 3355659 3356042 . - . ID=gene3021;Name=TREPR_0971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0971 CP001843.1 Genbank CDS 3355659 3356042 . - 0 ID=cds2889;Parent=gene3021;Dbxref=NCBI_GP:AEF85761.1;Name=AEF85761.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85761.1;transl_table=11 CP001843.1 Genbank gene 3356169 3357893 . + . ID=gene3022;Name=TREPR_0970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0970 CP001843.1 Genbank CDS 3356169 3357893 . + 0 ID=cds2890;Parent=gene3022;Dbxref=NCBI_GP:AEF84866.1;Name=AEF84866.1;Note=identified by match to protein family HMM PF02554;gbkey=CDS;product=carbon starvation protein A;protein_id=AEF84866.1;transl_table=11 CP001843.1 Genbank gene 3357896 3360127 . + . ID=gene3023;Name=TREPR_0969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0969 CP001843.1 Genbank CDS 3357896 3360127 . + 0 ID=cds2891;Parent=gene3023;Dbxref=NCBI_GP:AEF85912.1;Name=AEF85912.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229;gbkey=CDS;product=PAS domain protein;protein_id=AEF85912.1;transl_table=11 CP001843.1 Genbank gene 3360135 3360488 . - . ID=gene3024;Name=TREPR_0968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0968 CP001843.1 Genbank CDS 3360135 3360488 . - 0 ID=cds2892;Parent=gene3024;Dbxref=NCBI_GP:AEF86239.1;Name=AEF86239.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=transcriptional regulator;protein_id=AEF86239.1;transl_table=11 CP001843.1 Genbank gene 3360472 3360594 . - . ID=gene3025;Name=TREPR_0967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0967 CP001843.1 Genbank CDS 3360472 3360594 . - 0 ID=cds2893;Parent=gene3025;Dbxref=NCBI_GP:AEF83927.1;Name=AEF83927.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83927.1;transl_table=11 CP001843.1 Genbank gene 3360614 3362572 . - . ID=gene3026;Name=TREPR_0966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0966 CP001843.1 Genbank CDS 3360614 3362572 . - 0 ID=cds2894;Parent=gene3026;Dbxref=NCBI_GP:AEF85210.1;Name=AEF85210.1;Note=identified by match to protein family HMM PF00793%3B match to protein family HMM PF00800%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR01361;gbkey=CDS;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=AEF85210.1;transl_table=11 CP001843.1 Genbank gene 3362677 3363369 . - . ID=gene3027;Name=TREPR_0965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0965 CP001843.1 Genbank CDS 3362677 3363369 . - 0 ID=cds2895;Parent=gene3027;Dbxref=NCBI_GP:AEF85993.1;Name=AEF85993.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=polar amino acid ABC transporter%2C inner membrane subunit;protein_id=AEF85993.1;transl_table=11 CP001843.1 Genbank gene 3363366 3364178 . - . ID=gene3028;Name=TREPR_0964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0964 CP001843.1 Genbank CDS 3363366 3364178 . - 0 ID=cds2896;Parent=gene3028;Dbxref=NCBI_GP:AEF84802.1;Name=AEF84802.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=glutamine ABC transporter%2C permease/substrate-binding protein;protein_id=AEF84802.1;transl_table=11 CP001843.1 Genbank gene 3364135 3364932 . - . ID=gene3029;Name=TREPR_0963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0963 CP001843.1 Genbank CDS 3364135 3364932 . - 0 ID=cds2897;Parent=gene3029;Dbxref=NCBI_GP:AEF86623.1;Name=AEF86623.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=glutamine-binding protein (GlnBP);protein_id=AEF86623.1;transl_table=11 CP001843.1 Genbank gene 3364950 3365672 . - . ID=gene3030;Name=TREPR_0962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0962 CP001843.1 Genbank CDS 3364950 3365672 . - 0 ID=cds2898;Parent=gene3030;Dbxref=NCBI_GP:AEF86339.1;Name=AEF86339.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=glutamine transport ATP-binding protein GlnQ;protein_id=AEF86339.1;transl_table=11 CP001843.1 Genbank gene 3366189 3367730 . + . ID=gene3031;Name=TREPR_0961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0961 CP001843.1 Genbank CDS 3366189 3367730 . + 0 ID=cds2899;Parent=gene3031;Dbxref=NCBI_GP:AEF83811.1;Name=AEF83811.1;gbkey=CDS;product=leucine Rich Repeat domain protein;protein_id=AEF83811.1;transl_table=11 CP001843.1 Genbank gene 3367806 3368381 . - . ID=gene3032;Name=TREPR_0960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0960 CP001843.1 Genbank CDS 3367806 3368381 . - 0 ID=cds2900;Parent=gene3032;Dbxref=NCBI_GP:AEF84334.1;Name=AEF84334.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84334.1;transl_table=11 CP001843.1 Genbank gene 3368579 3369064 . - . ID=gene3033;Name=TREPR_0959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0959 CP001843.1 Genbank CDS 3368579 3369064 . - 0 ID=cds2901;Parent=gene3033;Dbxref=NCBI_GP:AEF85051.1;Name=AEF85051.1;Note=identified by match to protein family HMM PF00359;gbkey=CDS;product=PTS system IIA component%2C fructose subfamily;protein_id=AEF85051.1;transl_table=11 CP001843.1 Genbank gene 3369061 3371127 . - . ID=gene3034;Name=TREPR_0958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0958 CP001843.1 Genbank CDS 3369061 3371127 . - 0 ID=cds2902;Parent=gene3034;Dbxref=NCBI_GP:AEF86444.1;Name=AEF86444.1;Note=identified by match to protein family HMM PF07929;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86444.1;transl_table=11 CP001843.1 Genbank gene 3371171 3374083 . - . ID=gene3035;Name=TREPR_0957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0957 CP001843.1 Genbank CDS 3371171 3374083 . - 0 ID=cds2903;Parent=gene3035;Dbxref=NCBI_GP:AEF83834.1;Name=AEF83834.1;Note=identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM TIGR02166;gbkey=CDS;product=anaerobic dimethylsulfoxide reductase%2C A subunit;protein_id=AEF83834.1;transl_table=11 CP001843.1 Genbank gene 3374095 3374886 . - . ID=gene3036;Name=TREPR_0956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0956 CP001843.1 Genbank CDS 3374095 3374886 . - 0 ID=cds2904;Parent=gene3036;Dbxref=NCBI_GP:AEF84735.1;Name=AEF84735.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84735.1;transl_table=11 CP001843.1 Genbank gene 3374948 3375775 . + . ID=gene3037;Name=TREPR_0955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0955 CP001843.1 Genbank CDS 3374948 3375775 . + 0 ID=cds2905;Parent=gene3037;Dbxref=NCBI_GP:AEF85309.1;Name=AEF85309.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=extracellular solute-binding protein%2C family 3;protein_id=AEF85309.1;transl_table=11 CP001843.1 Genbank gene 3375778 3376479 . + . ID=gene3038;Name=TREPR_0954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0954 CP001843.1 Genbank CDS 3375778 3376479 . + 0 ID=cds2906;Parent=gene3038;Dbxref=NCBI_GP:AEF86222.1;Name=AEF86222.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=L-cystine transport system permease protein TcyB;protein_id=AEF86222.1;transl_table=11 CP001843.1 Genbank gene 3376499 3377248 . + . ID=gene3039;Name=TREPR_0953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0953 CP001843.1 Genbank CDS 3376499 3377248 . + 0 ID=cds2907;Parent=gene3039;Dbxref=NCBI_GP:AEF83763.1;Name=AEF83763.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ATP-binding protein;protein_id=AEF83763.1;transl_table=11 CP001843.1 Genbank gene 3377311 3377634 . + . ID=gene3040;Name=TREPR_0952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0952 CP001843.1 Genbank CDS 3377311 3377634 . + 0 ID=cds2908;Parent=gene3040;Dbxref=NCBI_GP:AEF84136.1;Name=AEF84136.1;Note=identified by match to protein family HMM PF01909;gbkey=CDS;product=nucleotidyltransferase family protein;protein_id=AEF84136.1;transl_table=11 CP001843.1 Genbank gene 3377624 3377755 . + . ID=gene3041;Name=TREPR_0951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0951 CP001843.1 Genbank CDS 3377624 3377755 . + 0 ID=cds2909;Parent=gene3041;Dbxref=NCBI_GP:AEF84861.1;Name=AEF84861.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84861.1;transl_table=11 CP001843.1 Genbank pseudogene 3377715 3377975 . + . ID=gene3042;Name=TREPR_0950;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0950;pseudo=true CP001843.1 Genbank gene 3378454 3379245 . - . ID=gene3043;Name=TREPR_0949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0949 CP001843.1 Genbank CDS 3378454 3379245 . - 0 ID=cds2910;Parent=gene3043;Dbxref=NCBI_GP:AEF86624.1;Name=AEF86624.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86624.1;transl_table=11 CP001843.1 Genbank gene 3379332 3382187 . - . ID=gene3044;Name=TREPR_0948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0948 CP001843.1 Genbank CDS 3379332 3382187 . - 0 ID=cds2911;Parent=gene3044;Dbxref=NCBI_GP:AEF84892.1;Name=AEF84892.1;Note=identified by match to protein family HMM PF02384%3B match to protein family HMM PF04313;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84892.1;transl_table=11 CP001843.1 Genbank gene 3382231 3382392 . - . ID=gene3045;Name=TREPR_0947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0947 CP001843.1 Genbank CDS 3382231 3382392 . - 0 ID=cds2912;Parent=gene3045;Dbxref=NCBI_GP:AEF85540.1;Name=AEF85540.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85540.1;transl_table=11 CP001843.1 Genbank gene 3382467 3383468 . + . ID=gene3046;Name=TREPR_0946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0946 CP001843.1 Genbank CDS 3382467 3383468 . + 0 ID=cds2913;Parent=gene3046;Dbxref=NCBI_GP:AEF86755.1;Name=AEF86755.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86755.1;transl_table=11 CP001843.1 Genbank gene 3383740 3384018 . + . ID=gene3047;Name=TREPR_0945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0945 CP001843.1 Genbank CDS 3383740 3384018 . + 0 ID=cds2914;Parent=gene3047;Dbxref=NCBI_GP:AEF83990.1;Name=AEF83990.1;gbkey=CDS;product=exonuclease;protein_id=AEF83990.1;transl_table=11 CP001843.1 Genbank gene 3384036 3384368 . - . ID=gene3048;Name=TREPR_0944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0944 CP001843.1 Genbank CDS 3384036 3384368 . - 0 ID=cds2915;Parent=gene3048;Dbxref=NCBI_GP:AEF86153.1;Name=AEF86153.1;Note=identified by match to protein family HMM PF07022;gbkey=CDS;product=putative bacteriophage CI repressor protein;protein_id=AEF86153.1;transl_table=11 CP001843.1 Genbank gene 3384964 3386223 . + . ID=gene3049;Name=TREPR_0943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0943 CP001843.1 Genbank CDS 3384964 3386223 . + 0 ID=cds2916;Parent=gene3049;Dbxref=NCBI_GP:AEF86886.1;Name=AEF86886.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86886.1;transl_table=11 CP001843.1 Genbank gene 3386237 3387358 . - . ID=gene3050;Name=TREPR_0942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0942 CP001843.1 Genbank CDS 3386237 3387358 . - 0 ID=cds2917;Parent=gene3050;Dbxref=NCBI_GP:AEF86416.1;Name=AEF86416.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86416.1;transl_table=11 CP001843.1 Genbank gene 3387376 3388443 . - . ID=gene3051;Name=TREPR_0941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0941 CP001843.1 Genbank CDS 3387376 3388443 . - 0 ID=cds2918;Parent=gene3051;Dbxref=NCBI_GP:AEF83686.1;Name=AEF83686.1;Note=identified by match to protein family HMM PF07728;gbkey=CDS;product=ATPase%2C AAA family;protein_id=AEF83686.1;transl_table=11 CP001843.1 Genbank gene 3389440 3390564 . - . ID=gene3052;Name=TREPR_0939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0939 CP001843.1 Genbank CDS 3389440 3390564 . - 0 ID=cds2919;Parent=gene3052;Dbxref=NCBI_GP:AEF85068.1;Name=AEF85068.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321;gbkey=CDS;product=putative peptidase M24;protein_id=AEF85068.1;transl_table=11 CP001843.1 Genbank gene 3390581 3391402 . - . ID=gene3053;Name=TREPR_0938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0938 CP001843.1 Genbank CDS 3390581 3391402 . - 0 ID=cds2920;Parent=gene3053;Dbxref=NCBI_GP:AEF85849.1;Name=AEF85849.1;Note=identified by match to protein family HMM PF01408%3B match to protein family HMM PF01958%3B match to protein family HMM PF03447;gbkey=CDS;product=probable L-aspartate dehydrogenase;protein_id=AEF85849.1;transl_table=11 CP001843.1 Genbank gene 3391402 3392007 . - . ID=gene3054;Name=TREPR_0937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0937 CP001843.1 Genbank CDS 3391402 3392007 . - 0 ID=cds2921;Parent=gene3054;Dbxref=NCBI_GP:AEF85053.1;Name=AEF85053.1;Note=identified by match to protein family HMM PF01470;gbkey=CDS;product=pyrrolidone-carboxylate peptidase (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase);protein_id=AEF85053.1;transl_table=11 CP001843.1 Genbank gene 3392086 3393639 . - . ID=gene3055;Name=TREPR_0936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0936 CP001843.1 Genbank CDS 3392086 3393639 . - 0 ID=cds2922;Parent=gene3055;Dbxref=NCBI_GP:AEF84304.1;Name=AEF84304.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=putative bacterial extracellular solute-binding protein%2C family 5;protein_id=AEF84304.1;transl_table=11 CP001843.1 Genbank gene 3393701 3394597 . - . ID=gene3056;Name=TREPR_0935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0935 CP001843.1 Genbank CDS 3393701 3394597 . - 0 ID=cds2923;Parent=gene3056;Dbxref=NCBI_GP:AEF86170.1;Name=AEF86170.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=glutathione transport system permease protein GsiD;protein_id=AEF86170.1;transl_table=11 CP001843.1 Genbank gene 3394597 3395544 . - . ID=gene3057;Name=TREPR_0934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0934 CP001843.1 Genbank CDS 3394597 3395544 . - 0 ID=cds2924;Parent=gene3057;Dbxref=NCBI_GP:AEF85418.1;Name=AEF85418.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=probable peptide ABC transporter permease protein y4tP;protein_id=AEF85418.1;transl_table=11 CP001843.1 Genbank gene 3395666 3396646 . + . ID=gene3058;Name=TREPR_0933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0933 CP001843.1 Genbank CDS 3395666 3396646 . + 0 ID=cds2925;Parent=gene3058;Dbxref=NCBI_GP:AEF84637.1;Name=AEF84637.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppD;protein_id=AEF84637.1;transl_table=11 CP001843.1 Genbank gene 3396661 3397644 . + . ID=gene3059;Name=TREPR_0932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0932 CP001843.1 Genbank CDS 3396661 3397644 . + 0 ID=cds2926;Parent=gene3059;Dbxref=NCBI_GP:AEF83896.1;Name=AEF83896.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF83896.1;transl_table=11 CP001843.1 Genbank gene 3397724 3402061 . - . ID=gene3060;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=TREPR_0931 CP001843.1 Genbank CDS 3397724 3402061 . - 0 ID=cds2927;Parent=gene3060;Dbxref=NCBI_GP:AEF85897.1;Name=AEF85897.1;Note=identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386;gbkey=CDS;gene=rpoC;product=DNA-directed RNA polymerase%2C beta' subunit;protein_id=AEF85897.1;transl_table=11 CP001843.1 Genbank gene 3402091 3405624 . - . ID=gene3061;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=TREPR_0930 CP001843.1 Genbank CDS 3402091 3405624 . - 0 ID=cds2928;Parent=gene3061;Dbxref=NCBI_GP:AEF85350.1;Name=AEF85350.1;Note=identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase%2C beta subunit;protein_id=AEF85350.1;transl_table=11 CP001843.1 Genbank gene 3405765 3406151 . - . ID=gene3062;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=TREPR_0929 CP001843.1 Genbank CDS 3405765 3406151 . - 0 ID=cds2929;Parent=gene3062;Dbxref=NCBI_GP:AEF85990.1;Name=AEF85990.1;Note=identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855;gbkey=CDS;gene=rplL;product=ribosomal protein L7/L12;protein_id=AEF85990.1;transl_table=11 CP001843.1 Genbank gene 3406296 3406847 . - . ID=gene3063;Name=TREPR_0928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0928 CP001843.1 Genbank CDS 3406296 3406847 . - 0 ID=cds2930;Parent=gene3063;Dbxref=NCBI_GP:AEF85031.1;Name=AEF85031.1;Note=identified by match to protein family HMM PF00466;gbkey=CDS;product=50S ribosomal protein L10;protein_id=AEF85031.1;transl_table=11 CP001843.1 Genbank gene 3406924 3407604 . - . ID=gene3064;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=TREPR_0927 CP001843.1 Genbank CDS 3406924 3407604 . - 0 ID=cds2931;Parent=gene3064;Dbxref=NCBI_GP:AEF84070.1;Name=AEF84070.1;Note=identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169;gbkey=CDS;gene=rplA;product=ribosomal protein L1;protein_id=AEF84070.1;transl_table=11 CP001843.1 Genbank gene 3407601 3408032 . - . ID=gene3065;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=TREPR_0926 CP001843.1 Genbank CDS 3407601 3408032 . - 0 ID=cds2932;Parent=gene3065;Dbxref=NCBI_GP:AEF86607.1;Name=AEF86607.1;Note=identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632;gbkey=CDS;gene=rplK;product=ribosomal protein L11;protein_id=AEF86607.1;transl_table=11 CP001843.1 Genbank gene 3408115 3408717 . - . ID=gene3066;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=TREPR_0925 CP001843.1 Genbank CDS 3408115 3408717 . - 0 ID=cds2933;Parent=gene3066;Dbxref=NCBI_GP:AEF85571.1;Name=AEF85571.1;Note=identified by match to protein family HMM PF00467%3B match to protein family HMM PF02357%3B match to protein family HMM TIGR00922;gbkey=CDS;gene=nusG;product=transcription termination/antitermination factor NusG;protein_id=AEF85571.1;transl_table=11 CP001843.1 Genbank gene 3408698 3408877 . - . ID=gene3067;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=TREPR_0924 CP001843.1 Genbank CDS 3408698 3408877 . - 0 ID=cds2934;Parent=gene3067;Dbxref=NCBI_GP:AEF86541.1;Name=AEF86541.1;Note=identified by match to protein family HMM PF00584%3B match to protein family HMM TIGR00964;gbkey=CDS;gene=secE;product=preprotein translocase%2C SecE subunit;protein_id=AEF86541.1;transl_table=11 CP001843.1 Genbank gene 3409080 3409152 . - . ID=gene3068;Name=TREPR_3913;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3913 CP001843.1 Genbank tRNA 3409080 3409152 . - . ID=rna48;Parent=gene3068;gbkey=tRNA;product=tRNA-Trp CP001843.1 Genbank exon 3409080 3409152 . - . ID=id54;Parent=rna48;gbkey=tRNA;product=tRNA-Trp CP001843.1 Genbank gene 3409160 3409333 . - . ID=gene3069;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=TREPR_0921 CP001843.1 Genbank CDS 3409160 3409333 . - 0 ID=cds2935;Parent=gene3069;Dbxref=NCBI_GP:AEF84539.1;Name=AEF84539.1;Note=identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023;gbkey=CDS;gene=rpmG;product=ribosomal protein L33;protein_id=AEF84539.1;transl_table=11 CP001843.1 Genbank gene 3409354 3409426 . - . ID=gene3070;Name=TREPR_3912;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3912 CP001843.1 Genbank tRNA 3409354 3409426 . - . ID=rna49;Parent=gene3070;gbkey=tRNA;product=tRNA-Thr CP001843.1 Genbank exon 3409354 3409426 . - . ID=id55;Parent=rna49;gbkey=tRNA;product=tRNA-Thr CP001843.1 Genbank gene 3409615 3410319 . + . ID=gene3071;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=TREPR_0918 CP001843.1 Genbank CDS 3409615 3410319 . + 0 ID=cds2936;Parent=gene3071;Dbxref=NCBI_GP:AEF84165.1;Name=AEF84165.1;Note=identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR00107;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=AEF84165.1;transl_table=11 CP001843.1 Genbank gene 3410367 3413306 . - . ID=gene3072;Name=TREPR_0917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0917 CP001843.1 Genbank CDS 3410367 3413306 . - 0 ID=cds2937;Parent=gene3072;Dbxref=NCBI_GP:AEF83639.1;Name=AEF83639.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;product=multi-sensor hybrid histidine kinase;protein_id=AEF83639.1;transl_table=11 CP001843.1 Genbank gene 3413321 3414715 . - . ID=gene3073;Name=TREPR_0916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0916 CP001843.1 Genbank CDS 3413321 3414715 . - 0 ID=cds2938;Parent=gene3073;Dbxref=NCBI_GP:AEF84437.1;Name=AEF84437.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84437.1;transl_table=11 CP001843.1 Genbank gene 3414866 3414949 . + . ID=gene3074;Name=TREPR_3911;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3911 CP001843.1 Genbank tRNA 3414866 3414949 . + . ID=rna50;Parent=gene3074;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank exon 3414866 3414949 . + . ID=id56;Parent=rna50;gbkey=tRNA;product=tRNA-Leu CP001843.1 Genbank gene 3415105 3416313 . + . ID=gene3075;Name=TREPR_0914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0914 CP001843.1 Genbank CDS 3415105 3416313 . + 0 ID=cds2939;Parent=gene3075;Dbxref=NCBI_GP:AEF86418.1;Name=AEF86418.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;product=site-specific recombinase%2C phage integrase family;protein_id=AEF86418.1;transl_table=11 CP001843.1 Genbank gene 3416316 3417086 . + . ID=gene3076;Name=TREPR_0913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0913 CP001843.1 Genbank CDS 3416316 3417086 . + 0 ID=cds2940;Parent=gene3076;Dbxref=NCBI_GP:AEF83678.1;Name=AEF83678.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;product=putative plasmid partition protein;protein_id=AEF83678.1;transl_table=11 CP001843.1 Genbank gene 3417086 3417949 . + . ID=gene3077;Name=TREPR_0912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0912 CP001843.1 Genbank CDS 3417086 3417949 . + 0 ID=cds2941;Parent=gene3077;Dbxref=NCBI_GP:AEF84927.1;Name=AEF84927.1;Note=identified by match to protein family HMM PF02195;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84927.1;transl_table=11 CP001843.1 Genbank gene 3418736 3420652 . + . ID=gene3078;Name=TREPR_0911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0911 CP001843.1 Genbank CDS 3418736 3420652 . + 0 ID=cds2942;Parent=gene3078;Dbxref=NCBI_GP:AEF85637.1;Name=AEF85637.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85637.1;transl_table=11 CP001843.1 Genbank gene 3421167 3422387 . - . ID=gene3079;Name=TREPR_0909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0909 CP001843.1 Genbank CDS 3421167 3422387 . - 0 ID=cds2943;Parent=gene3079;Dbxref=NCBI_GP:AEF85041.1;Name=AEF85041.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85041.1;transl_table=11 CP001843.1 Genbank gene 3422537 3422725 . + . ID=gene3080;Name=TREPR_0908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0908 CP001843.1 Genbank CDS 3422537 3422725 . + 0 ID=cds2944;Parent=gene3080;Dbxref=NCBI_GP:AEF84432.1;Name=AEF84432.1;Note=identified by match to protein family HMM PF05930%3B match to protein family HMM TIGR01764;gbkey=CDS;product=conserved domain protein;protein_id=AEF84432.1;transl_table=11 CP001843.1 Genbank gene 3423523 3423699 . + . ID=gene3081;Name=TREPR_0907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0907 CP001843.1 Genbank CDS 3423523 3423699 . + 0 ID=cds2945;Parent=gene3081;Dbxref=NCBI_GP:AEF86676.1;Name=AEF86676.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86676.1;transl_table=11 CP001843.1 Genbank gene 3423731 3424570 . - . ID=gene3082;Name=TREPR_0906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0906 CP001843.1 Genbank CDS 3423731 3424570 . - 0 ID=cds2946;Parent=gene3082;Dbxref=NCBI_GP:AEF84507.1;Name=AEF84507.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84507.1;transl_table=11 CP001843.1 Genbank gene 3424743 3427691 . - . ID=gene3083;Name=TREPR_0904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0904 CP001843.1 Genbank CDS 3424743 3427691 . - 0 ID=cds2947;Parent=gene3083;Dbxref=NCBI_GP:AEF86969.1;Name=AEF86969.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594;gbkey=CDS;product=DNA polymerase III%2C alpha subunit;protein_id=AEF86969.1;transl_table=11 CP001843.1 Genbank gene 3427684 3428901 . - . ID=gene3084;Name=TREPR_0903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0903 CP001843.1 Genbank CDS 3427684 3428901 . - 0 ID=cds2948;Parent=gene3084;Dbxref=NCBI_GP:AEF83673.1;Name=AEF83673.1;Note=identified by match to protein family HMM PF00817;gbkey=CDS;product=DNA-directed DNA polymerase;protein_id=AEF83673.1;transl_table=11 CP001843.1 Genbank gene 3428904 3429707 . - . ID=gene3085;Name=TREPR_0902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0902 CP001843.1 Genbank CDS 3428904 3429707 . - 0 ID=cds2949;Parent=gene3085;Dbxref=NCBI_GP:AEF84963.1;Name=AEF84963.1;Note=identified by match to protein family HMM PF01904;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84963.1;transl_table=11 CP001843.1 Genbank gene 3429819 3430442 . + . ID=gene3086;Name=TREPR_0901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0901 CP001843.1 Genbank CDS 3429819 3430442 . + 0 ID=cds2950;Parent=gene3086;Dbxref=NCBI_GP:AEF86018.1;Name=AEF86018.1;Note=identified by match to protein family HMM PF00717;gbkey=CDS;product=putative transcriptional regulator;protein_id=AEF86018.1;transl_table=11 CP001843.1 Genbank gene 3430474 3432309 . + . ID=gene3087;Name=TREPR_0900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0900 CP001843.1 Genbank CDS 3430474 3432309 . + 0 ID=cds2951;Parent=gene3087;Dbxref=NCBI_GP:AEF83946.1;Name=AEF83946.1;gbkey=CDS;product=AAA ATPase;protein_id=AEF83946.1;transl_table=11 CP001843.1 Genbank gene 3432400 3433143 . + . ID=gene3088;Name=TREPR_0899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0899 CP001843.1 Genbank CDS 3432400 3433143 . + 0 ID=cds2952;Parent=gene3088;Dbxref=NCBI_GP:AEF84082.1;Name=AEF84082.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84082.1;transl_table=11 CP001843.1 Genbank gene 3433297 3433764 . + . ID=gene3089;Name=TREPR_0898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0898 CP001843.1 Genbank CDS 3433297 3433764 . + 0 ID=cds2953;Parent=gene3089;Dbxref=NCBI_GP:AEF85471.1;Name=AEF85471.1;Note=identified by match to protein family HMM PF04002;gbkey=CDS;product=DNA repair protein RadC;protein_id=AEF85471.1;transl_table=11 CP001843.1 Genbank gene 3433910 3434833 . + . ID=gene3090;Name=TREPR_0897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0897 CP001843.1 Genbank CDS 3433910 3434833 . + 0 ID=cds2954;Parent=gene3090;Dbxref=NCBI_GP:AEF83718.1;Name=AEF83718.1;Note=identified by match to protein family HMM TIGR03299;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83718.1;transl_table=11 CP001843.1 Genbank gene 3434933 3435469 . + . ID=gene3091;Name=TREPR_0896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0896 CP001843.1 Genbank CDS 3434933 3435469 . + 0 ID=cds2955;Parent=gene3091;Dbxref=NCBI_GP:AEF84703.1;Name=AEF84703.1;gbkey=CDS;product=sugar-phospahte nucleotidyltransferase;protein_id=AEF84703.1;transl_table=11 CP001843.1 Genbank gene 3435542 3435766 . + . ID=gene3092;Name=TREPR_0895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0895 CP001843.1 Genbank CDS 3435542 3435766 . + 0 ID=cds2956;Parent=gene3092;Dbxref=NCBI_GP:AEF83527.1;Name=AEF83527.1;gbkey=CDS;product=RNA polymerase beta-subunit;protein_id=AEF83527.1;transl_table=11 CP001843.1 Genbank gene 3435756 3436004 . + . ID=gene3093;Name=TREPR_0894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0894 CP001843.1 Genbank CDS 3435756 3436004 . + 0 ID=cds2957;Parent=gene3093;Dbxref=NCBI_GP:AEF85793.1;Name=AEF85793.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85793.1;transl_table=11 CP001843.1 Genbank gene 3436006 3436485 . + . ID=gene3094;Name=TREPR_0893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0893 CP001843.1 Genbank CDS 3436006 3436485 . + 0 ID=cds2958;Parent=gene3094;Dbxref=NCBI_GP:AEF85473.1;Name=AEF85473.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85473.1;transl_table=11 CP001843.1 Genbank gene 3436485 3437363 . + . ID=gene3095;Name=TREPR_0892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0892 CP001843.1 Genbank CDS 3436485 3437363 . + 0 ID=cds2959;Parent=gene3095;Dbxref=NCBI_GP:AEF84222.1;Name=AEF84222.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84222.1;transl_table=11 CP001843.1 Genbank gene 3437378 3437587 . + . ID=gene3096;Name=TREPR_0891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0891 CP001843.1 Genbank CDS 3437378 3437587 . + 0 ID=cds2960;Parent=gene3096;Dbxref=NCBI_GP:AEF86961.1;Name=AEF86961.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86961.1;transl_table=11 CP001843.1 Genbank gene 3437587 3437784 . + . ID=gene3097;Name=TREPR_0890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0890 CP001843.1 Genbank CDS 3437587 3437784 . + 0 ID=cds2961;Parent=gene3097;Dbxref=NCBI_GP:AEF85740.1;Name=AEF85740.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85740.1;transl_table=11 CP001843.1 Genbank gene 3438064 3439125 . + . ID=gene3098;Name=TREPR_0889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0889 CP001843.1 Genbank CDS 3438064 3439125 . + 0 ID=cds2962;Parent=gene3098;Dbxref=NCBI_GP:AEF85145.1;Name=AEF85145.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85145.1;transl_table=11 CP001843.1 Genbank gene 3439198 3439968 . + . ID=gene3099;Name=TREPR_0888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0888 CP001843.1 Genbank CDS 3439198 3439968 . + 0 ID=cds2963;Parent=gene3099;Dbxref=NCBI_GP:AEF84825.1;Name=AEF84825.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84825.1;transl_table=11 CP001843.1 Genbank gene 3440033 3440428 . + . ID=gene3100;Name=TREPR_0887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0887 CP001843.1 Genbank CDS 3440033 3440428 . + 0 ID=cds2964;Parent=gene3100;Dbxref=NCBI_GP:AEF86652.1;Name=AEF86652.1;Note=identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621;gbkey=CDS;product=single-strand binding family protein;protein_id=AEF86652.1;transl_table=11 CP001843.1 Genbank gene 3440496 3441326 . + . ID=gene3101;Name=TREPR_0886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0886 CP001843.1 Genbank CDS 3440496 3441326 . + 0 ID=cds2965;Parent=gene3101;Dbxref=NCBI_GP:AEF85888.1;Name=AEF85888.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85888.1;transl_table=11 CP001843.1 Genbank gene 3441316 3441705 . + . ID=gene3102;Name=TREPR_0885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0885 CP001843.1 Genbank CDS 3441316 3441705 . + 0 ID=cds2966;Parent=gene3102;Dbxref=NCBI_GP:AEF86547.1;Name=AEF86547.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86547.1;transl_table=11 CP001843.1 Genbank gene 3441809 3442150 . + . ID=gene3103;Name=TREPR_0884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0884 CP001843.1 Genbank CDS 3441809 3442150 . + 0 ID=cds2967;Parent=gene3103;Dbxref=NCBI_GP:AEF83817.1;Name=AEF83817.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83817.1;transl_table=11 CP001843.1 Genbank gene 3442153 3442344 . + . ID=gene3104;Name=TREPR_0883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0883 CP001843.1 Genbank CDS 3442153 3442344 . + 0 ID=cds2968;Parent=gene3104;Dbxref=NCBI_GP:AEF84562.1;Name=AEF84562.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84562.1;transl_table=11 CP001843.1 Genbank gene 3442357 3442878 . + . ID=gene3105;Name=TREPR_0882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0882 CP001843.1 Genbank CDS 3442357 3442878 . + 0 ID=cds2969;Parent=gene3105;Dbxref=NCBI_GP:AEF85317.1;Name=AEF85317.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=helix-turn-helix domain protein;protein_id=AEF85317.1;transl_table=11 CP001843.1 Genbank gene 3442866 3443420 . + . ID=gene3106;Name=TREPR_0881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0881 CP001843.1 Genbank CDS 3442866 3443420 . + 0 ID=cds2970;Parent=gene3106;Dbxref=NCBI_GP:AEF86306.1;Name=AEF86306.1;gbkey=CDS;product=lecithin retinol acyltransferase (Phosphatidylcholine--retinol O-acyltransferase) (Phosphatidylcholine-retinol-O-acyltransferase);protein_id=AEF86306.1;transl_table=11 CP001843.1 Genbank gene 3443465 3444061 . + . ID=gene3107;Name=TREPR_0880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0880 CP001843.1 Genbank CDS 3443465 3444061 . + 0 ID=cds2971;Parent=gene3107;Dbxref=NCBI_GP:AEF85110.1;Name=AEF85110.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85110.1;transl_table=11 CP001843.1 Genbank gene 3444064 3444984 . + . ID=gene3108;Name=TREPR_0879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0879 CP001843.1 Genbank CDS 3444064 3444984 . + 0 ID=cds2972;Parent=gene3108;Dbxref=NCBI_GP:AEF86092.1;Name=AEF86092.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86092.1;transl_table=11 CP001843.1 Genbank gene 3445160 3445873 . + . ID=gene3109;Name=TREPR_0878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0878 CP001843.1 Genbank CDS 3445160 3445873 . + 0 ID=cds2973;Parent=gene3109;Dbxref=NCBI_GP:AEF84314.1;Name=AEF84314.1;Note=identified by match to protein family HMM PF00583;gbkey=CDS;product=acetyltransferase%2C GNAT family;protein_id=AEF84314.1;transl_table=11 CP001843.1 Genbank gene 3445955 3446086 . + . ID=gene3110;Name=TREPR_0876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0876 CP001843.1 Genbank CDS 3445955 3446086 . + 0 ID=cds2974;Parent=gene3110;Dbxref=NCBI_GP:AEF84611.1;Name=AEF84611.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84611.1;transl_table=11 CP001843.1 Genbank gene 3446059 3446307 . - . ID=gene3111;Name=TREPR_0877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0877 CP001843.1 Genbank CDS 3446059 3446307 . - 0 ID=cds2975;Parent=gene3111;Dbxref=NCBI_GP:AEF83798.1;Name=AEF83798.1;gbkey=CDS;product=transposase;protein_id=AEF83798.1;transl_table=11 CP001843.1 Genbank gene 3446448 3448193 . - . ID=gene3112;Name=TREPR_0875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0875 CP001843.1 Genbank CDS 3446448 3448193 . - 0 ID=cds2976;Parent=gene3112;Dbxref=NCBI_GP:AEF84543.1;Name=AEF84543.1;gbkey=CDS;product=putative surface antigen BspA;protein_id=AEF84543.1;transl_table=11 CP001843.1 Genbank gene 3448200 3448658 . + . ID=gene3113;Name=TREPR_0874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0874 CP001843.1 Genbank CDS 3448200 3448658 . + 0 ID=cds2977;Parent=gene3113;Dbxref=NCBI_GP:AEF85537.1;Name=AEF85537.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85537.1;transl_table=11 CP001843.1 Genbank gene 3448655 3448768 . + . ID=gene3114;Name=TREPR_0873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0873 CP001843.1 Genbank CDS 3448655 3448768 . + 0 ID=cds2978;Parent=gene3114;Dbxref=NCBI_GP:AEF86528.1;Name=AEF86528.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86528.1;transl_table=11 CP001843.1 Genbank gene 3448785 3449036 . + . ID=gene3115;Name=TREPR_0872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0872 CP001843.1 Genbank CDS 3448785 3449036 . + 0 ID=cds2979;Parent=gene3115;Dbxref=NCBI_GP:AEF86878.1;Name=AEF86878.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86878.1;transl_table=11 CP001843.1 Genbank gene 3449046 3449276 . + . ID=gene3116;Name=TREPR_0871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0871 CP001843.1 Genbank CDS 3449046 3449276 . + 0 ID=cds2980;Parent=gene3116;Dbxref=NCBI_GP:AEF83652.1;Name=AEF83652.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83652.1;transl_table=11 CP001843.1 Genbank gene 3449379 3449582 . - . ID=gene3117;Name=TREPR_0870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0870 CP001843.1 Genbank CDS 3449379 3449582 . - 0 ID=cds2981;Parent=gene3117;Dbxref=NCBI_GP:AEF84404.1;Name=AEF84404.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84404.1;transl_table=11 CP001843.1 Genbank gene 3449569 3449694 . - . ID=gene3118;Name=TREPR_0869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0869 CP001843.1 Genbank CDS 3449569 3449694 . - 0 ID=cds2982;Parent=gene3118;Dbxref=NCBI_GP:AEF85624.1;Name=AEF85624.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85624.1;transl_table=11 CP001843.1 Genbank gene 3449771 3451861 . - . ID=gene3119;Name=TREPR_0868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0868 CP001843.1 Genbank CDS 3449771 3451861 . - 0 ID=cds2983;Parent=gene3119;Dbxref=NCBI_GP:AEF86450.1;Name=AEF86450.1;Note=identified by match to protein family HMM PF07581;gbkey=CDS;product=glug;protein_id=AEF86450.1;transl_table=11 CP001843.1 Genbank pseudogene 3452127 3455642 . - . ID=gene3120;Name=TREPR_0867;Note=putative filamentous haemagglutinin family outer membrane protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF07581;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0867;pseudo=true CP001843.1 Genbank gene 3455639 3456160 . - . ID=gene3121;Name=TREPR_0866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0866 CP001843.1 Genbank CDS 3455639 3456160 . - 0 ID=cds2984;Parent=gene3121;Dbxref=NCBI_GP:AEF85144.1;Name=AEF85144.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85144.1;transl_table=11 CP001843.1 Genbank gene 3456138 3456257 . + . ID=gene3122;Name=TREPR_0865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0865 CP001843.1 Genbank CDS 3456138 3456257 . + 0 ID=cds2985;Parent=gene3122;Dbxref=NCBI_GP:AEF84309.1;Name=AEF84309.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84309.1;transl_table=11 CP001843.1 Genbank gene 3456361 3456963 . - . ID=gene3123;Name=TREPR_0864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0864 CP001843.1 Genbank CDS 3456361 3456963 . - 0 ID=cds2986;Parent=gene3123;Dbxref=NCBI_GP:AEF86641.1;Name=AEF86641.1;Note=identified by match to protein family HMM PF07605;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86641.1;transl_table=11 CP001843.1 Genbank gene 3457088 3457390 . + . ID=gene3124;Name=TREPR_0863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0863 CP001843.1 Genbank CDS 3457088 3457390 . + 0 ID=cds2987;Parent=gene3124;Dbxref=NCBI_GP:AEF84761.1;Name=AEF84761.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84761.1;transl_table=11 CP001843.1 Genbank gene 3457552 3458037 . - . ID=gene3125;Name=TREPR_0862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0862 CP001843.1 Genbank CDS 3457552 3458037 . - 0 ID=cds2988;Parent=gene3125;Dbxref=NCBI_GP:AEF84561.1;Name=AEF84561.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84561.1;transl_table=11 CP001843.1 Genbank gene 3458194 3458379 . + . ID=gene3126;Name=TREPR_0861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0861 CP001843.1 Genbank CDS 3458194 3458379 . + 0 ID=cds2989;Parent=gene3126;Dbxref=NCBI_GP:AEF85196.1;Name=AEF85196.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85196.1;transl_table=11 CP001843.1 Genbank gene 3459180 3460193 . + . ID=gene3127;Name=TREPR_0860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0860 CP001843.1 Genbank CDS 3459180 3460193 . + 0 ID=cds2990;Parent=gene3127;Dbxref=NCBI_GP:AEF85762.1;Name=AEF85762.1;Note=identified by match to protein family HMM PF03480;gbkey=CDS;product=putative trap dicarboxylate transporter- dctp subunit;protein_id=AEF85762.1;transl_table=11 CP001843.1 Genbank gene 3460190 3462076 . + . ID=gene3128;Name=TREPR_0859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0859 CP001843.1 Genbank CDS 3460190 3462076 . + 0 ID=cds2991;Parent=gene3128;Dbxref=NCBI_GP:AEF86764.1;Name=AEF86764.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;product=trap dicarboxylate transporter%2C dctm subunit;protein_id=AEF86764.1;transl_table=11 CP001843.1 Genbank gene 3462087 3462908 . + . ID=gene3129;Name=TREPR_0857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0857 CP001843.1 Genbank CDS 3462087 3462908 . + 0 ID=cds2992;Parent=gene3129;Dbxref=NCBI_GP:AEF85717.1;Name=AEF85717.1;Note=identified by match to protein family HMM PF01553;gbkey=CDS;product=glycosyltransferase%2C family 1;protein_id=AEF85717.1;transl_table=11 CP001843.1 Genbank gene 3462887 3463252 . - . ID=gene3130;Name=TREPR_0858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0858 CP001843.1 Genbank CDS 3462887 3463252 . - 0 ID=cds2993;Parent=gene3130;Dbxref=NCBI_GP:AEF83819.1;Name=AEF83819.1;gbkey=CDS;product=hydrolase;protein_id=AEF83819.1;transl_table=11 CP001843.1 Genbank gene 3463528 3465228 . - . ID=gene3131;Name=TREPR_0856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0856 CP001843.1 Genbank CDS 3463528 3465228 . - 0 ID=cds2994;Parent=gene3131;Dbxref=NCBI_GP:AEF85069.1;Name=AEF85069.1;Note=identified by match to protein family HMM PF03321;gbkey=CDS;product=GH3 auxin-responsive promoter superfamily;protein_id=AEF85069.1;transl_table=11 CP001843.1 Genbank gene 3465339 3469112 . + . ID=gene3132;Name=TREPR_0855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0855 CP001843.1 Genbank CDS 3465339 3469112 . + 0 ID=cds2995;Parent=gene3132;Dbxref=NCBI_GP:AEF86144.1;Name=AEF86144.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF01590%3B match to protein family HMM PF01814%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR02481;gbkey=CDS;product=sensory transduction histidine kinase;protein_id=AEF86144.1;transl_table=11 CP001843.1 Genbank gene 3469206 3469841 . - . ID=gene3133;Name=TREPR_0854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0854 CP001843.1 Genbank CDS 3469206 3469841 . - 0 ID=cds2996;Parent=gene3133;Dbxref=NCBI_GP:AEF86539.1;Name=AEF86539.1;Note=identified by match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351;gbkey=CDS;product=adenylate kinase;protein_id=AEF86539.1;transl_table=11 CP001843.1 Genbank gene 3469890 3470699 . - . ID=gene3134;Name=TREPR_0853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0853 CP001843.1 Genbank CDS 3469890 3470699 . - 0 ID=cds2997;Parent=gene3134;Dbxref=NCBI_GP:AEF84012.1;Name=AEF84012.1;Note=identified by match to protein family HMM PF02535;gbkey=CDS;product=zinc transporter%2C ZIP family;protein_id=AEF84012.1;transl_table=11 CP001843.1 Genbank gene 3470771 3471640 . - . ID=gene3135;Name=TREPR_0852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0852 CP001843.1 Genbank CDS 3470771 3471640 . - 0 ID=cds2998;Parent=gene3135;Dbxref=NCBI_GP:AEF85592.1;Name=AEF85592.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF85592.1;transl_table=11 CP001843.1 Genbank gene 3471819 3473474 . - . ID=gene3136;Name=TREPR_0851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0851 CP001843.1 Genbank CDS 3471819 3473474 . - 0 ID=cds2999;Parent=gene3136;Dbxref=NCBI_GP:AEF86589.1;Name=AEF86589.1;Note=identified by match to protein family HMM PF09587;gbkey=CDS;product=poly-gamma-glutamate biosynthesis protein;protein_id=AEF86589.1;transl_table=11 CP001843.1 Genbank gene 3473502 3473693 . - . ID=gene3137;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=TREPR_0850 CP001843.1 Genbank CDS 3473502 3473693 . - 0 ID=cds3000;Parent=gene3137;Dbxref=NCBI_GP:AEF83559.1;Name=AEF83559.1;Note=identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009;gbkey=CDS;gene=rpmB;product=ribosomal protein L28;protein_id=AEF83559.1;transl_table=11 CP001843.1 Genbank gene 3473802 3474389 . - . ID=gene3138;Name=TREPR_0849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0849 CP001843.1 Genbank CDS 3473802 3474389 . - 0 ID=cds3001;Parent=gene3138;Dbxref=NCBI_GP:AEF84546.1;Name=AEF84546.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84546.1;transl_table=11 CP001843.1 Genbank gene 3474405 3475019 . - . ID=gene3139;Name=TREPR_0848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0848 CP001843.1 Genbank CDS 3474405 3475019 . - 0 ID=cds3002;Parent=gene3139;Dbxref=NCBI_GP:AEF84008.1;Name=AEF84008.1;Note=identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=AEF84008.1;transl_table=11 CP001843.1 Genbank gene 3475041 3475634 . - . ID=gene3140;Name=TREPR_0847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0847 CP001843.1 Genbank CDS 3475041 3475634 . - 0 ID=cds3003;Parent=gene3140;Dbxref=NCBI_GP:AEF86593.1;Name=AEF86593.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86593.1;transl_table=11 CP001843.1 Genbank gene 3475644 3475949 . - . ID=gene3141;Name=TREPR_0846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0846 CP001843.1 Genbank CDS 3475644 3475949 . - 0 ID=cds3004;Parent=gene3141;Dbxref=NCBI_GP:AEF86964.1;Name=AEF86964.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=AEF86964.1;transl_table=11 CP001843.1 Genbank gene 3476052 3476207 . - . ID=gene3142;Name=TREPR_0845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0845 CP001843.1 Genbank CDS 3476052 3476207 . - 0 ID=cds3005;Parent=gene3142;Dbxref=NCBI_GP:AEF84231.1;Name=AEF84231.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84231.1;transl_table=11 CP001843.1 Genbank gene 3476161 3476523 . + . ID=gene3143;Name=TREPR_0843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0843 CP001843.1 Genbank CDS 3476161 3476523 . + 0 ID=cds3006;Parent=gene3143;Dbxref=NCBI_GP:AEF85359.1;Name=AEF85359.1;Note=identified by match to protein family HMM PF01638;gbkey=CDS;product=transcriptional regulator%2C HxlR family;protein_id=AEF85359.1;transl_table=11 CP001843.1 Genbank gene 3476520 3477263 . - . ID=gene3144;Name=TREPR_0844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0844 CP001843.1 Genbank CDS 3476520 3477263 . - 0 ID=cds3007;Parent=gene3144;Dbxref=NCBI_GP:AEF84590.1;Name=AEF84590.1;Note=identified by match to protein family HMM PF01643;gbkey=CDS;product=putative acyl-ACP thioesterase superfamily;protein_id=AEF84590.1;transl_table=11 CP001843.1 Genbank gene 3477305 3478495 . - . ID=gene3145;Name=TREPR_0842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0842 CP001843.1 Genbank CDS 3477305 3478495 . - 0 ID=cds3008;Parent=gene3145;Dbxref=NCBI_GP:AEF86515.1;Name=AEF86515.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86515.1;transl_table=11 CP001843.1 Genbank gene 3478495 3481254 . - . ID=gene3146;Name=TREPR_0841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0841 CP001843.1 Genbank CDS 3478495 3481254 . - 0 ID=cds3009;Parent=gene3146;Dbxref=NCBI_GP:AEF83755.1;Name=AEF83755.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83755.1;transl_table=11 CP001843.1 Genbank gene 3481408 3482922 . - . ID=gene3147;Name=TREPR_0840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0840 CP001843.1 Genbank CDS 3481408 3482922 . - 0 ID=cds3010;Parent=gene3147;Dbxref=NCBI_GP:AEF85938.1;Name=AEF85938.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM;protein_id=AEF85938.1;transl_table=11 CP001843.1 Genbank gene 3482927 3483556 . - . ID=gene3148;Name=TREPR_0839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0839 CP001843.1 Genbank CDS 3482927 3483556 . - 0 ID=cds3011;Parent=gene3148;Dbxref=NCBI_GP:AEF86627.1;Name=AEF86627.1;Note=identified by match to protein family HMM PF06941;gbkey=CDS;product=5 nucleotidase%2C deoxy%2C cytosolic type C;protein_id=AEF86627.1;transl_table=11 CP001843.1 Genbank gene 3483572 3485725 . - . ID=gene3149;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=TREPR_0838 CP001843.1 Genbank CDS 3483572 3485725 . - 0 ID=cds3012;Parent=gene3149;Dbxref=NCBI_GP:AEF85860.1;Name=AEF85860.1;Note=identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR02100;gbkey=CDS;gene=glgX;product=glycogen debranching enzyme GlgX;protein_id=AEF85860.1;transl_table=11 CP001843.1 Genbank gene 3485735 3486571 . - . ID=gene3150;Name=TREPR_0837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0837 CP001843.1 Genbank CDS 3485735 3486571 . - 0 ID=cds3013;Parent=gene3150;Dbxref=NCBI_GP:AEF83840.1;Name=AEF83840.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83840.1;transl_table=11 CP001843.1 Genbank gene 3486570 3487823 . + . ID=gene3151;Name=TREPR_0836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0836 CP001843.1 Genbank CDS 3486570 3487823 . + 0 ID=cds3014;Parent=gene3151;Dbxref=NCBI_GP:AEF83836.1;Name=AEF83836.1;Note=identified by match to protein family HMM PF01053;gbkey=CDS;product=cystathionine gamma-synthase;protein_id=AEF83836.1;transl_table=11 CP001843.1 Genbank pseudogene 3487923 3488324 . + . ID=gene3152;Name=TREPR_0835;Note=D-methionine-binding lipoprotein MetQ%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0835;pseudo=true CP001843.1 Genbank pseudogene 3488353 3488733 . + . ID=gene3153;Name=metQ;Note=D-methionine ABC transporter%2C periplasmic D-methionine-binding protein%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF03180;gbkey=Gene;gene=metQ;gene_biotype=pseudogene;locus_tag=TREPR_0834;pseudo=true CP001843.1 Genbank gene 3488803 3489852 . + . ID=gene3154;Name=TREPR_0833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0833 CP001843.1 Genbank CDS 3488803 3489852 . + 0 ID=cds3015;Parent=gene3154;Dbxref=NCBI_GP:AEF84266.1;Name=AEF84266.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383;gbkey=CDS;product=methionine import ATP-binding protein MetN;protein_id=AEF84266.1;transl_table=11 CP001843.1 Genbank gene 3489845 3490525 . + . ID=gene3155;Name=TREPR_0832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0832 CP001843.1 Genbank CDS 3489845 3490525 . + 0 ID=cds3016;Parent=gene3155;Dbxref=NCBI_GP:AEF84284.1;Name=AEF84284.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=D-methionine transport system permease protein MetI;protein_id=AEF84284.1;transl_table=11 CP001843.1 Genbank gene 3490539 3491702 . + . ID=gene3156;Name=TREPR_0831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0831 CP001843.1 Genbank CDS 3490539 3491702 . + 0 ID=cds3017;Parent=gene3156;Dbxref=NCBI_GP:AEF86848.1;Name=AEF86848.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;product=thermostable carboxypeptidase 1;protein_id=AEF86848.1;transl_table=11 CP001843.1 Genbank gene 3491838 3493442 . - . ID=gene3157;Name=TREPR_0830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0830 CP001843.1 Genbank CDS 3491838 3493442 . - 0 ID=cds3018;Parent=gene3157;Dbxref=NCBI_GP:AEF85887.1;Name=AEF85887.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=OppA1;protein_id=AEF85887.1;transl_table=11 CP001843.1 Genbank gene 3493607 3495016 . + . ID=gene3158;Name=TREPR_0829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0829 CP001843.1 Genbank CDS 3493607 3495016 . + 0 ID=cds3019;Parent=gene3158;Dbxref=NCBI_GP:AEF84787.1;Name=AEF84787.1;Note=identified by match to protein family HMM PF02127;gbkey=CDS;product=probable M18 family aminopeptidase 1;protein_id=AEF84787.1;transl_table=11 CP001843.1 Genbank gene 3495034 3496026 . - . ID=gene3159;Name=TREPR_0828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0828 CP001843.1 Genbank CDS 3495034 3496026 . - 0 ID=cds3020;Parent=gene3159;Dbxref=NCBI_GP:AEF84796.1;Name=AEF84796.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF84796.1;transl_table=11 CP001843.1 Genbank gene 3496029 3497054 . - . ID=gene3160;Name=TREPR_0827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0827 CP001843.1 Genbank CDS 3496029 3497054 . - 0 ID=cds3021;Parent=gene3160;Dbxref=NCBI_GP:AEF84035.1;Name=AEF84035.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=dipeptide transport ATP-binding protein DppD;protein_id=AEF84035.1;transl_table=11 CP001843.1 Genbank gene 3497044 3497982 . - . ID=gene3161;Name=TREPR_0826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0826 CP001843.1 Genbank CDS 3497044 3497982 . - 0 ID=cds3022;Parent=gene3161;Dbxref=NCBI_GP:AEF85836.1;Name=AEF85836.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=glutathione transport system permease protein GsiD;protein_id=AEF85836.1;transl_table=11 CP001843.1 Genbank gene 3497979 3499025 . - . ID=gene3162;Name=TREPR_0825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0825 CP001843.1 Genbank CDS 3497979 3499025 . - 0 ID=cds3023;Parent=gene3162;Dbxref=NCBI_GP:AEF84203.1;Name=AEF84203.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein OppB;protein_id=AEF84203.1;transl_table=11 CP001843.1 Genbank gene 3499205 3500671 . + . ID=gene3163;Name=TREPR_0824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0824 CP001843.1 Genbank CDS 3499205 3500671 . + 0 ID=cds3024;Parent=gene3163;Dbxref=NCBI_GP:AEF85171.1;Name=AEF85171.1;Note=identified by match to protein family HMM PF02384;gbkey=CDS;product=type I restriction modification system M subunit;protein_id=AEF85171.1;transl_table=11 CP001843.1 Genbank gene 3500668 3500892 . + . ID=gene3164;Name=TREPR_0823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0823 CP001843.1 Genbank CDS 3500668 3500892 . + 0 ID=cds3025;Parent=gene3164;Dbxref=NCBI_GP:AEF84595.1;Name=AEF84595.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84595.1;transl_table=11 CP001843.1 Genbank gene 3500889 3501371 . + . ID=gene3165;Name=TREPR_0822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0822 CP001843.1 Genbank CDS 3500889 3501371 . + 0 ID=cds3026;Parent=gene3165;Dbxref=NCBI_GP:AEF85570.1;Name=AEF85570.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85570.1;transl_table=11 CP001843.1 Genbank gene 3501368 3501619 . + . ID=gene3166;Name=TREPR_0821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0821 CP001843.1 Genbank CDS 3501368 3501619 . + 0 ID=cds3027;Parent=gene3166;Dbxref=NCBI_GP:AEF85830.1;Name=AEF85830.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85830.1;transl_table=11 CP001843.1 Genbank gene 3501621 3502736 . + . ID=gene3167;Name=TREPR_0820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0820 CP001843.1 Genbank CDS 3501621 3502736 . + 0 ID=cds3028;Parent=gene3167;Dbxref=NCBI_GP:AEF86822.1;Name=AEF86822.1;Note=identified by match to protein family HMM PF01420;gbkey=CDS;product=type I restriction-modification system S subunit;protein_id=AEF86822.1;transl_table=11 CP001843.1 Genbank gene 3502796 3503788 . + . ID=gene3168;Name=TREPR_0819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0819 CP001843.1 Genbank CDS 3502796 3503788 . + 0 ID=cds3029;Parent=gene3168;Dbxref=NCBI_GP:AEF85075.1;Name=AEF85075.1;Note=identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899;gbkey=CDS;product=integrase/recombinase%2C phage integrase family;protein_id=AEF85075.1;transl_table=11 CP001843.1 Genbank gene 3503811 3504440 . + . ID=gene3169;Name=TREPR_0818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0818 CP001843.1 Genbank CDS 3503811 3504440 . + 0 ID=cds3030;Parent=gene3169;Dbxref=NCBI_GP:AEF84320.1;Name=AEF84320.1;Note=identified by match to protein family HMM PF01420;gbkey=CDS;product=type I site-specific deoxyribonuclease;protein_id=AEF84320.1;transl_table=11 CP001843.1 Genbank gene 3504553 3507948 . + . ID=gene3170;Name=TREPR_0817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0817 CP001843.1 Genbank CDS 3504553 3507948 . + 0 ID=cds3031;Parent=gene3170;Dbxref=NCBI_GP:AEF85818.1;Name=AEF85818.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04313%3B match to protein family HMM PF04851;gbkey=CDS;product=type I restriction-modification system R subunit;protein_id=AEF85818.1;transl_table=11 CP001843.1 Genbank pseudogene 3508101 3508295 . + . ID=gene3171;Name=TREPR_0816;Note=conserved hypothetical protein%3B this gene contains a premature stop which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0816;pseudo=true CP001843.1 Genbank gene 3508396 3508671 . + . ID=gene3172;Name=TREPR_0815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0815 CP001843.1 Genbank CDS 3508396 3508671 . + 0 ID=cds3032;Parent=gene3172;Dbxref=NCBI_GP:AEF84589.1;Name=AEF84589.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84589.1;transl_table=11 CP001843.1 Genbank gene 3509482 3510456 . + . ID=gene3173;Name=TREPR_0813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0813 CP001843.1 Genbank CDS 3509482 3510456 . + 0 ID=cds3033;Parent=gene3173;Dbxref=NCBI_GP:AEF87019.1;Name=AEF87019.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF87019.1;transl_table=11 CP001843.1 Genbank gene 3510473 3511777 . + . ID=gene3174;Name=TREPR_0812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0812 CP001843.1 Genbank CDS 3510473 3511777 . + 0 ID=cds3034;Parent=gene3174;Dbxref=NCBI_GP:AEF83987.1;Name=AEF83987.1;Note=identified by match to protein family HMM PF07521;gbkey=CDS;product=beta-lactamase domain protein;protein_id=AEF83987.1;transl_table=11 CP001843.1 Genbank gene 3511948 3513660 . - . ID=gene3175;Name=TREPR_0811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0811 CP001843.1 Genbank CDS 3511948 3513660 . - 0 ID=cds3035;Parent=gene3175;Dbxref=NCBI_GP:AEF85029.1;Name=AEF85029.1;Note=identified by match to protein family HMM PF00560;gbkey=CDS;product=small GTP-binding protein;protein_id=AEF85029.1;transl_table=11 CP001843.1 Genbank gene 3513731 3514150 . - . ID=gene3176;Name=TREPR_0810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0810 CP001843.1 Genbank CDS 3513731 3514150 . - 0 ID=cds3036;Parent=gene3176;Dbxref=NCBI_GP:AEF85453.1;Name=AEF85453.1;Note=identified by match to protein family HMM PF08279;gbkey=CDS;product=HTH domain protein;protein_id=AEF85453.1;transl_table=11 CP001843.1 Genbank gene 3514418 3516091 . - . ID=gene3177;Name=TREPR_0809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0809 CP001843.1 Genbank CDS 3514418 3516091 . - 0 ID=cds3037;Parent=gene3177;Dbxref=NCBI_GP:AEF85035.1;Name=AEF85035.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85035.1;transl_table=11 CP001843.1 Genbank gene 3516109 3517284 . - . ID=gene3178;Name=TREPR_0808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0808 CP001843.1 Genbank CDS 3516109 3517284 . - 0 ID=cds3038;Parent=gene3178;Dbxref=NCBI_GP:AEF83599.1;Name=AEF83599.1;Note=identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728;gbkey=CDS;product=ATPase%2C AAA family;protein_id=AEF83599.1;transl_table=11 CP001843.1 Genbank gene 3517841 3517913 . - . ID=gene3179;Name=TREPR_3910;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3910 CP001843.1 Genbank tRNA 3517841 3517913 . - . ID=rna51;Parent=gene3179;gbkey=tRNA;product=tRNA-Asn CP001843.1 Genbank exon 3517841 3517913 . - . ID=id57;Parent=rna51;gbkey=tRNA;product=tRNA-Asn CP001843.1 Genbank gene 3518008 3519222 . + . ID=gene3180;Name=TREPR_0805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0805 CP001843.1 Genbank CDS 3518008 3519222 . + 0 ID=cds3039;Parent=gene3180;Dbxref=NCBI_GP:AEF85607.1;Name=AEF85607.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85607.1;transl_table=11 CP001843.1 Genbank gene 3519225 3520088 . + . ID=gene3181;Name=TREPR_0804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0804 CP001843.1 Genbank CDS 3519225 3520088 . + 0 ID=cds3040;Parent=gene3181;Dbxref=NCBI_GP:AEF84559.1;Name=AEF84559.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84559.1;transl_table=11 CP001843.1 Genbank gene 3520095 3520979 . + . ID=gene3182;Name=TREPR_0803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0803 CP001843.1 Genbank CDS 3520095 3520979 . + 0 ID=cds3041;Parent=gene3182;Dbxref=NCBI_GP:AEF86507.1;Name=AEF86507.1;Note=identified by match to protein family HMM PF02353%3B match to protein family HMM PF07021%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;product=methyltransferase type 12;protein_id=AEF86507.1;transl_table=11 CP001843.1 Genbank gene 3520995 3522365 . - . ID=gene3183;Name=TREPR_0802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0802 CP001843.1 Genbank CDS 3520995 3522365 . - 0 ID=cds3042;Parent=gene3183;Dbxref=NCBI_GP:AEF85518.1;Name=AEF85518.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF85518.1;transl_table=11 CP001843.1 Genbank gene 3522364 3523098 . + . ID=gene3184;Name=TREPR_0801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0801 CP001843.1 Genbank CDS 3522364 3523098 . + 0 ID=cds3043;Parent=gene3184;Dbxref=NCBI_GP:AEF85025.1;Name=AEF85025.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=AEF85025.1;transl_table=11 CP001843.1 Genbank gene 3523106 3523417 . - . ID=gene3185;Name=TREPR_0800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0800 CP001843.1 Genbank CDS 3523106 3523417 . - 0 ID=cds3044;Parent=gene3185;Dbxref=NCBI_GP:AEF83947.1;Name=AEF83947.1;Note=identified by match to protein family HMM PF01371;gbkey=CDS;product=conserved domain protein;protein_id=AEF83947.1;transl_table=11 CP001843.1 Genbank gene 3523456 3524031 . - . ID=gene3186;Name=TREPR_0799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0799 CP001843.1 Genbank CDS 3523456 3524031 . - 0 ID=cds3045;Parent=gene3186;Dbxref=NCBI_GP:AEF84938.1;Name=AEF84938.1;Note=identified by match to protein family HMM PF01871%3B match to protein family HMM TIGR00296;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84938.1;transl_table=11 CP001843.1 Genbank gene 3524073 3524807 . + . ID=gene3187;Name=TREPR_0798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0798 CP001843.1 Genbank CDS 3524073 3524807 . + 0 ID=cds3046;Parent=gene3187;Dbxref=NCBI_GP:AEF83605.1;Name=AEF83605.1;Note=identified by match to protein family HMM PF03591;gbkey=CDS;product=branched-chain amino acid transport protein AzlC;protein_id=AEF83605.1;transl_table=11 CP001843.1 Genbank gene 3524800 3525159 . + . ID=gene3188;Name=TREPR_0797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0797 CP001843.1 Genbank CDS 3524800 3525159 . + 0 ID=cds3047;Parent=gene3188;Dbxref=NCBI_GP:AEF87020.1;Name=AEF87020.1;Note=identified by match to protein family HMM PF05437;gbkey=CDS;product=branched-chain amino acid transport;protein_id=AEF87020.1;transl_table=11 CP001843.1 Genbank gene 3525217 3525987 . + . ID=gene3189;Name=TREPR_0796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0796 CP001843.1 Genbank CDS 3525217 3525987 . + 0 ID=cds3048;Parent=gene3189;Dbxref=NCBI_GP:AEF85865.1;Name=AEF85865.1;Note=identified by match to protein family HMM PF02405;gbkey=CDS;product=ABC transporter permease protein;protein_id=AEF85865.1;transl_table=11 CP001843.1 Genbank gene 3525995 3526732 . + . ID=gene3190;Name=TREPR_0795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0795 CP001843.1 Genbank CDS 3525995 3526732 . + 0 ID=cds3049;Parent=gene3190;Dbxref=NCBI_GP:AEF84139.1;Name=AEF84139.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=putative ABC transporter%2C ATP-binding protein;protein_id=AEF84139.1;transl_table=11 CP001843.1 Genbank gene 3526729 3527772 . + . ID=gene3191;Name=TREPR_0794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0794 CP001843.1 Genbank CDS 3526729 3527772 . + 0 ID=cds3050;Parent=gene3191;Dbxref=NCBI_GP:AEF86659.1;Name=AEF86659.1;Note=identified by match to protein family HMM PF02470;gbkey=CDS;product=Mce-like protein;protein_id=AEF86659.1;transl_table=11 CP001843.1 Genbank gene 3527800 3528732 . + . ID=gene3192;Name=TREPR_0793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0793 CP001843.1 Genbank CDS 3527800 3528732 . + 0 ID=cds3051;Parent=gene3192;Dbxref=NCBI_GP:AEF86542.1;Name=AEF86542.1;gbkey=CDS;product=tetratricopeptide repeat domain protein;protein_id=AEF86542.1;transl_table=11 CP001843.1 Genbank gene 3528734 3529123 . + . ID=gene3193;Name=TREPR_0791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0791 CP001843.1 Genbank CDS 3528734 3529123 . + 0 ID=cds3052;Parent=gene3193;Dbxref=NCBI_GP:AEF83837.1;Name=AEF83837.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;product=glyoxalase domain protein;protein_id=AEF83837.1;transl_table=11 CP001843.1 Genbank gene 3529101 3529274 . - . ID=gene3194;Name=TREPR_0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0792 CP001843.1 Genbank CDS 3529101 3529274 . - 0 ID=cds3053;Parent=gene3194;Dbxref=NCBI_GP:AEF85554.1;Name=AEF85554.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85554.1;transl_table=11 CP001843.1 Genbank gene 3529318 3530232 . + . ID=gene3195;Name=TREPR_0790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0790 CP001843.1 Genbank CDS 3529318 3530232 . + 0 ID=cds3054;Parent=gene3195;Dbxref=NCBI_GP:AEF86371.1;Name=AEF86371.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86371.1;transl_table=11 CP001843.1 Genbank gene 3530261 3530425 . + . ID=gene3196;Name=TREPR_0789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0789 CP001843.1 Genbank CDS 3530261 3530425 . + 0 ID=cds3055;Parent=gene3196;Dbxref=NCBI_GP:AEF85289.1;Name=AEF85289.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85289.1;transl_table=11 CP001843.1 Genbank pseudogene 3530755 3531003 . + . ID=gene3197;Name=TREPR_0787;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0787;pseudo=true CP001843.1 Genbank gene 3531013 3531891 . + . ID=gene3198;Name=TREPR_0786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0786 CP001843.1 Genbank CDS 3531013 3531891 . + 0 ID=cds3056;Parent=gene3198;Dbxref=NCBI_GP:AEF85304.1;Name=AEF85304.1;gbkey=CDS;product=cell surface protein;protein_id=AEF85304.1;transl_table=11 CP001843.1 Genbank gene 3532306 3532704 . + . ID=gene3199;Name=TREPR_0785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0785 CP001843.1 Genbank CDS 3532306 3532704 . + 0 ID=cds3057;Parent=gene3199;Dbxref=NCBI_GP:AEF85218.1;Name=AEF85218.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85218.1;transl_table=11 CP001843.1 Genbank gene 3532701 3532910 . + . ID=gene3200;Name=TREPR_0784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0784 CP001843.1 Genbank CDS 3532701 3532910 . + 0 ID=cds3058;Parent=gene3200;Dbxref=NCBI_GP:AEF84197.1;Name=AEF84197.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84197.1;transl_table=11 CP001843.1 Genbank gene 3533243 3533470 . - . ID=gene3201;Name=TREPR_0783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0783 CP001843.1 Genbank CDS 3533243 3533470 . - 0 ID=cds3059;Parent=gene3201;Dbxref=NCBI_GP:AEF84307.1;Name=AEF84307.1;gbkey=CDS;product=ABC transporter component A;protein_id=AEF84307.1;transl_table=11 CP001843.1 Genbank gene 3533647 3534048 . + . ID=gene3202;Name=TREPR_0782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0782 CP001843.1 Genbank CDS 3533647 3534048 . + 0 ID=cds3060;Parent=gene3202;Dbxref=NCBI_GP:AEF86631.1;Name=AEF86631.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86631.1;transl_table=11 CP001843.1 Genbank gene 3534187 3535977 . + . ID=gene3203;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=TREPR_0781 CP001843.1 Genbank CDS 3534187 3535977 . + 0 ID=cds3061;Parent=gene3203;Dbxref=NCBI_GP:AEF84497.1;Name=AEF84497.1;Note=identified by match to protein family HMM PF01411%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344;gbkey=CDS;gene=alaS;product=alanine--tRNA ligase;protein_id=AEF84497.1;transl_table=11 CP001843.1 Genbank gene 3536041 3537399 . + . ID=gene3204;Name=TREPR_0780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0780 CP001843.1 Genbank CDS 3536041 3537399 . + 0 ID=cds3062;Parent=gene3204;Dbxref=NCBI_GP:AEF85030.1;Name=AEF85030.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85030.1;transl_table=11 CP001843.1 Genbank gene 3537403 3537909 . + . ID=gene3205;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=TREPR_0779 CP001843.1 Genbank CDS 3537403 3537909 . + 0 ID=cds3063;Parent=gene3205;Dbxref=NCBI_GP:AEF83938.1;Name=AEF83938.1;Note=identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951;gbkey=CDS;gene=nusB;product=transcription antitermination factor NusB;protein_id=AEF83938.1;transl_table=11 CP001843.1 Genbank gene 3537906 3539639 . + . ID=gene3206;Name=TREPR_0778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0778 CP001843.1 Genbank CDS 3537906 3539639 . + 0 ID=cds3064;Parent=gene3206;Dbxref=NCBI_GP:AEF83949.1;Name=AEF83949.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83949.1;transl_table=11 CP001843.1 Genbank gene 3539687 3540295 . - . ID=gene3207;Name=TREPR_0777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0777 CP001843.1 Genbank CDS 3539687 3540295 . - 0 ID=cds3065;Parent=gene3207;Dbxref=NCBI_GP:AEF86231.1;Name=AEF86231.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86231.1;transl_table=11 CP001843.1 Genbank gene 3540528 3541829 . + . ID=gene3208;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=TREPR_0776 CP001843.1 Genbank CDS 3540528 3541829 . + 0 ID=cds3066;Parent=gene3208;Dbxref=NCBI_GP:AEF85463.1;Name=AEF85463.1;Note=identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060;gbkey=CDS;gene=eno;product=phosphopyruvate hydratase;protein_id=AEF85463.1;transl_table=11 CP001843.1 Genbank gene 3541911 3542084 . - . ID=gene3209;Name=TREPR_0775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0775 CP001843.1 Genbank CDS 3541911 3542084 . - 0 ID=cds3067;Parent=gene3209;Dbxref=NCBI_GP:AEF84225.1;Name=AEF84225.1;gbkey=CDS;product=multiphosphoryl transfer protein 1 (MTP 1);protein_id=AEF84225.1;transl_table=11 CP001843.1 Genbank gene 3542127 3542432 . + . ID=gene3210;Name=TREPR_0774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0774 CP001843.1 Genbank CDS 3542127 3542432 . + 0 ID=cds3068;Parent=gene3210;Dbxref=NCBI_GP:AEF85205.1;Name=AEF85205.1;Note=identified by match to protein family HMM PF05973%3B match to protein family HMM TIGR02683;gbkey=CDS;product=probable addiction module killer protein;protein_id=AEF85205.1;transl_table=11 CP001843.1 Genbank gene 3542419 3542706 . + . ID=gene3211;Name=TREPR_0773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0773 CP001843.1 Genbank CDS 3542419 3542706 . + 0 ID=cds3069;Parent=gene3211;Dbxref=NCBI_GP:AEF85647.1;Name=AEF85647.1;Note=identified by match to protein family HMM TIGR02684;gbkey=CDS;product=probable addiction module antidote protein;protein_id=AEF85647.1;transl_table=11 CP001843.1 Genbank gene 3543144 3543217 . - . ID=gene3212;Name=TREPR_3909;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3909 CP001843.1 Genbank tRNA 3543144 3543217 . - . ID=rna52;Parent=gene3212;gbkey=tRNA;product=tRNA-Ala CP001843.1 Genbank exon 3543144 3543217 . - . ID=id58;Parent=rna52;gbkey=tRNA;product=tRNA-Ala CP001843.1 Genbank gene 3543423 3545093 . + . ID=gene3213;Name=TREPR_0770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0770 CP001843.1 Genbank CDS 3543423 3545093 . + 0 ID=cds3070;Parent=gene3213;Dbxref=NCBI_GP:AEF83657.1;Name=AEF83657.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83657.1;transl_table=11 CP001843.1 Genbank gene 3545109 3545381 . - . ID=gene3214;Name=TREPR_0769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0769 CP001843.1 Genbank CDS 3545109 3545381 . - 0 ID=cds3071;Parent=gene3214;Dbxref=NCBI_GP:AEF84635.1;Name=AEF84635.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84635.1;transl_table=11 CP001843.1 Genbank gene 3545365 3545919 . - . ID=gene3215;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=TREPR_0768 CP001843.1 Genbank CDS 3545365 3545919 . - 0 ID=cds3072;Parent=gene3215;Dbxref=NCBI_GP:AEF86970.1;Name=AEF86970.1;Note=identified by match to protein family HMM PF01252%3B match to protein family HMM TIGR00077;gbkey=CDS;gene=lspA;product=signal peptidase II;protein_id=AEF86970.1;transl_table=11 CP001843.1 Genbank gene 3545931 3546692 . - . ID=gene3216;Name=TREPR_0767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0767 CP001843.1 Genbank CDS 3545931 3546692 . - 0 ID=cds3073;Parent=gene3216;Dbxref=NCBI_GP:AEF84736.1;Name=AEF84736.1;Note=identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84736.1;transl_table=11 CP001843.1 Genbank gene 3546689 3548152 . - . ID=gene3217;Name=TREPR_0766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0766 CP001843.1 Genbank CDS 3546689 3548152 . - 0 ID=cds3074;Parent=gene3217;Dbxref=NCBI_GP:AEF86637.1;Name=AEF86637.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86637.1;transl_table=11 CP001843.1 Genbank gene 3548295 3549785 . + . ID=gene3218;Name=TREPR_0765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0765 CP001843.1 Genbank CDS 3548295 3549785 . + 0 ID=cds3075;Parent=gene3218;Dbxref=NCBI_GP:AEF86308.1;Name=AEF86308.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM PF08668%3B match to protein family HMM TIGR00277;gbkey=CDS;product=HD domain protein;protein_id=AEF86308.1;transl_table=11 CP001843.1 Genbank gene 3549927 3550196 . - . ID=gene3219;Name=TREPR_0764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0764 CP001843.1 Genbank CDS 3549927 3550196 . - 0 ID=cds3076;Parent=gene3219;Dbxref=NCBI_GP:AEF83921.1;Name=AEF83921.1;Note=identified by match to protein family HMM PF00076;gbkey=CDS;product=RNA-binding protein;protein_id=AEF83921.1;transl_table=11 CP001843.1 Genbank gene 3550294 3550488 . - . ID=gene3220;Name=TREPR_0763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0763 CP001843.1 Genbank CDS 3550294 3550488 . - 0 ID=cds3077;Parent=gene3220;Dbxref=NCBI_GP:AEF86209.1;Name=AEF86209.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86209.1;transl_table=11 CP001843.1 Genbank pseudogene 3550991 3551206 . + . ID=gene3221;Name=TREPR_0761;Note=31 kDa ribonucleoprotein%2C (RNA-binding proteinRNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding proteincp31)%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00076;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0761;pseudo=true CP001843.1 Genbank gene 3551312 3551680 . - . ID=gene3222;Name=TREPR_0760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0760 CP001843.1 Genbank CDS 3551312 3551680 . - 0 ID=cds3078;Parent=gene3222;Dbxref=NCBI_GP:AEF85456.1;Name=AEF85456.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85456.1;transl_table=11 CP001843.1 Genbank gene 3551682 3552263 . - . ID=gene3223;Name=TREPR_0759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0759 CP001843.1 Genbank CDS 3551682 3552263 . - 0 ID=cds3079;Parent=gene3223;Dbxref=NCBI_GP:AEF86705.1;Name=AEF86705.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86705.1;transl_table=11 CP001843.1 Genbank gene 3552264 3553262 . - . ID=gene3224;Name=TREPR_0758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0758 CP001843.1 Genbank CDS 3552264 3553262 . - 0 ID=cds3080;Parent=gene3224;Dbxref=NCBI_GP:AEF84358.1;Name=AEF84358.1;gbkey=CDS;product=band 7 protein;protein_id=AEF84358.1;transl_table=11 CP001843.1 Genbank gene 3553326 3554957 . - . ID=gene3225;Name=TREPR_0757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0757 CP001843.1 Genbank CDS 3553326 3554957 . - 0 ID=cds3081;Parent=gene3225;Dbxref=NCBI_GP:AEF84633.1;Name=AEF84633.1;Note=identified by match to protein family HMM PF01957;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84633.1;transl_table=11 CP001843.1 Genbank gene 3555023 3556060 . - . ID=gene3226;Name=TREPR_0756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0756 CP001843.1 Genbank CDS 3555023 3556060 . - 0 ID=cds3082;Parent=gene3226;Dbxref=NCBI_GP:AEF83883.1;Name=AEF83883.1;Note=identified by match to protein family HMM PF01208;gbkey=CDS;product=uroporphyrinogen decarboxylase;protein_id=AEF83883.1;transl_table=11 CP001843.1 Genbank gene 3556057 3556752 . - . ID=gene3227;Name=TREPR_0755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0755 CP001843.1 Genbank CDS 3556057 3556752 . - 0 ID=cds3083;Parent=gene3227;Dbxref=NCBI_GP:AEF86168.1;Name=AEF86168.1;Note=identified by match to protein family HMM PF02310%3B match to protein family HMM PF02607;gbkey=CDS;product=dimethylamine corrinoid protein;protein_id=AEF86168.1;transl_table=11 CP001843.1 Genbank gene 3556786 3557361 . - . ID=gene3228;Name=TREPR_0754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0754 CP001843.1 Genbank CDS 3556786 3557361 . - 0 ID=cds3084;Parent=gene3228;Dbxref=NCBI_GP:AEF85409.1;Name=AEF85409.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85409.1;transl_table=11 CP001843.1 Genbank gene 3557362 3558390 . - . ID=gene3229;Name=TREPR_0753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0753 CP001843.1 Genbank CDS 3557362 3558390 . - 0 ID=cds3085;Parent=gene3229;Dbxref=NCBI_GP:AEF86154.1;Name=AEF86154.1;Note=identified by match to protein family HMM PF01208;gbkey=CDS;product=methyltransferase MtaA/CmuA family;protein_id=AEF86154.1;transl_table=11 CP001843.1 Genbank gene 3558501 3558662 . + . ID=gene3230;Name=TREPR_0752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0752 CP001843.1 Genbank CDS 3558501 3558662 . + 0 ID=cds3086;Parent=gene3230;Dbxref=NCBI_GP:AEF85162.1;Name=AEF85162.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85162.1;transl_table=11 CP001843.1 Genbank gene 3558743 3558886 . - . ID=gene3231;Name=TREPR_0751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0751 CP001843.1 Genbank CDS 3558743 3558886 . - 0 ID=cds3087;Parent=gene3231;Dbxref=NCBI_GP:AEF83961.1;Name=AEF83961.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83961.1;transl_table=11 CP001843.1 Genbank gene 3558879 3561737 . + . ID=gene3232;Name=TREPR_0750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0750 CP001843.1 Genbank CDS 3558879 3561737 . + 0 ID=cds3088;Parent=gene3232;Dbxref=NCBI_GP:AEF86492.1;Name=AEF86492.1;gbkey=CDS;product=putative outer membrane autotransporter barrel domain protein;protein_id=AEF86492.1;transl_table=11 CP001843.1 Genbank gene 3561838 3565197 . + . ID=gene3233;Name=TREPR_0749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0749 CP001843.1 Genbank CDS 3561838 3565197 . + 0 ID=cds3089;Parent=gene3233;Dbxref=NCBI_GP:AEF83955.1;Name=AEF83955.1;Note=identified by match to protein family HMM PF00580;gbkey=CDS;product=DNA and RNA helicase;protein_id=AEF83955.1;transl_table=11 CP001843.1 Genbank gene 3565216 3566082 . - . ID=gene3234;Name=TREPR_0748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0748 CP001843.1 Genbank CDS 3565216 3566082 . - 0 ID=cds3090;Parent=gene3234;Dbxref=NCBI_GP:AEF86504.1;Name=AEF86504.1;Note=identified by match to protein family HMM PF03372;gbkey=CDS;product=endonuclease/exonuclease/phosphatase family protein;protein_id=AEF86504.1;transl_table=11 CP001843.1 Genbank gene 3566095 3570063 . - . ID=gene3235;Name=TREPR_0747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0747 CP001843.1 Genbank CDS 3566095 3570063 . - 0 ID=cds3091;Parent=gene3235;Dbxref=NCBI_GP:AEF84989.1;Name=AEF84989.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84989.1;transl_table=11 CP001843.1 Genbank gene 3570177 3570791 . - . ID=gene3236;Name=TREPR_0746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0746 CP001843.1 Genbank CDS 3570177 3570791 . - 0 ID=cds3092;Parent=gene3236;Dbxref=NCBI_GP:AEF84034.1;Name=AEF84034.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=nitroreductase;protein_id=AEF84034.1;transl_table=11 CP001843.1 Genbank gene 3570944 3571783 . - . ID=gene3237;Name=TREPR_0745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0745 CP001843.1 Genbank CDS 3570944 3571783 . - 0 ID=cds3093;Parent=gene3237;Dbxref=NCBI_GP:AEF86993.1;Name=AEF86993.1;gbkey=CDS;product=4Fe-4S ferredoxin%2C iron-sulfur binding protein;protein_id=AEF86993.1;transl_table=11 CP001843.1 Genbank gene 3571979 3572464 . + . ID=gene3238;Name=TREPR_0744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0744 CP001843.1 Genbank CDS 3571979 3572464 . + 0 ID=cds3094;Parent=gene3238;Dbxref=NCBI_GP:AEF86044.1;Name=AEF86044.1;Note=identified by match to protein family HMM PF02082;gbkey=CDS;product=RRF2 family protein;protein_id=AEF86044.1;transl_table=11 CP001843.1 Genbank gene 3572496 3572831 . + . ID=gene3239;Name=TREPR_0743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0743 CP001843.1 Genbank CDS 3572496 3572831 . + 0 ID=cds3095;Parent=gene3239;Dbxref=NCBI_GP:AEF84572.1;Name=AEF84572.1;Note=identified by match to protein family HMM PF01909;gbkey=CDS;product=DNA polymerase%2C beta domain protein region;protein_id=AEF84572.1;transl_table=11 CP001843.1 Genbank gene 3572877 3573077 . + . ID=gene3240;Name=TREPR_0742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0742 CP001843.1 Genbank CDS 3572877 3573077 . + 0 ID=cds3096;Parent=gene3240;Dbxref=NCBI_GP:AEF83816.1;Name=AEF83816.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83816.1;transl_table=11 CP001843.1 Genbank gene 3573165 3573452 . + . ID=gene3241;Name=TREPR_0741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0741 CP001843.1 Genbank CDS 3573165 3573452 . + 0 ID=cds3097;Parent=gene3241;Dbxref=NCBI_GP:AEF86553.1;Name=AEF86553.1;Note=identified by match to protein family HMM PF08922;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86553.1;transl_table=11 CP001843.1 Genbank gene 3573528 3574283 . - . ID=gene3242;Name=TREPR_0740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0740 CP001843.1 Genbank CDS 3573528 3574283 . - 0 ID=cds3098;Parent=gene3242;Dbxref=NCBI_GP:AEF84864.1;Name=AEF84864.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84864.1;transl_table=11 CP001843.1 Genbank gene 3574349 3574747 . - . ID=gene3243;Name=TREPR_0739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0739 CP001843.1 Genbank CDS 3574349 3574747 . - 0 ID=cds3099;Parent=gene3243;Dbxref=NCBI_GP:AEF85498.1;Name=AEF85498.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85498.1;transl_table=11 CP001843.1 Genbank gene 3574869 3575924 . - . ID=gene3244;Name=TREPR_0738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0738 CP001843.1 Genbank CDS 3574869 3575924 . - 0 ID=cds3100;Parent=gene3244;Dbxref=NCBI_GP:AEF84488.1;Name=AEF84488.1;Note=identified by match to protein family HMM PF00665;gbkey=CDS;product=putative transposase;protein_id=AEF84488.1;transl_table=11 CP001843.1 Genbank gene 3576708 3578096 . + . ID=gene3245;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=TREPR_0735 CP001843.1 Genbank CDS 3576708 3578096 . + 0 ID=cds3101;Parent=gene3245;Dbxref=NCBI_GP:AEF85067.1;Name=AEF85067.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00389;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase;protein_id=AEF85067.1;transl_table=11 CP001843.1 Genbank gene 3578109 3578405 . + . ID=gene3246;Name=TREPR_0734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0734 CP001843.1 Genbank CDS 3578109 3578405 . + 0 ID=cds3102;Parent=gene3246;Dbxref=NCBI_GP:AEF84333.1;Name=AEF84333.1;Note=identified by match to protein family HMM PF00708;gbkey=CDS;product=acylphosphatase;protein_id=AEF84333.1;transl_table=11 CP001843.1 Genbank gene 3578415 3579758 . + . ID=gene3247;Name=TREPR_0733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0733 CP001843.1 Genbank CDS 3578415 3579758 . + 0 ID=cds3103;Parent=gene3247;Dbxref=NCBI_GP:AEF85128.1;Name=AEF85128.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;product=MATE efflux family protein;protein_id=AEF85128.1;transl_table=11 CP001843.1 Genbank gene 3580141 3580211 . - . ID=gene3248;Name=TREPR_3908;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3908 CP001843.1 Genbank tRNA 3580141 3580211 . - . ID=rna53;Parent=gene3248;gbkey=tRNA;product=tRNA-Gly CP001843.1 Genbank exon 3580141 3580211 . - . ID=id59;Parent=rna53;gbkey=tRNA;product=tRNA-Gly CP001843.1 Genbank gene 3580249 3583431 . - . ID=gene3249;Name=TREPR_0731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0731 CP001843.1 Genbank CDS 3580249 3583431 . - 0 ID=cds3104;Parent=gene3249;Dbxref=NCBI_GP:AEF84379.1;Name=AEF84379.1;gbkey=CDS;product=nuclease sbcCD subunit C;protein_id=AEF84379.1;transl_table=11 CP001843.1 Genbank gene 3583428 3584693 . - . ID=gene3250;Name=TREPR_0730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0730 CP001843.1 Genbank CDS 3583428 3584693 . - 0 ID=cds3105;Parent=gene3250;Dbxref=NCBI_GP:AEF83856.1;Name=AEF83856.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619;gbkey=CDS;product=DNA repair exonuclease%2C SbcD;protein_id=AEF83856.1;transl_table=11 CP001843.1 Genbank gene 3584819 3585832 . + . ID=gene3251;Name=TREPR_0729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0729 CP001843.1 Genbank CDS 3584819 3585832 . + 0 ID=cds3106;Parent=gene3251;Dbxref=NCBI_GP:AEF86391.1;Name=AEF86391.1;gbkey=CDS;product=D-galactose-binding periplasmic protein (gbp) (d-galactose/d-glucose-binding protein) (ggbp);protein_id=AEF86391.1;transl_table=11 CP001843.1 Genbank gene 3585909 3587423 . + . ID=gene3252;Name=TREPR_0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0728 CP001843.1 Genbank CDS 3585909 3587423 . + 0 ID=cds3107;Parent=gene3252;Dbxref=NCBI_GP:AEF85805.1;Name=AEF85805.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=galactose/methyl galactoside import ATP-binding protein MglA;protein_id=AEF85805.1;transl_table=11 CP001843.1 Genbank gene 3587438 3588478 . + . ID=gene3253;Name=TREPR_0727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0727 CP001843.1 Genbank CDS 3587438 3588478 . + 0 ID=cds3108;Parent=gene3253;Dbxref=NCBI_GP:AEF84760.1;Name=AEF84760.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=galactoside transport system permease protein MglC;protein_id=AEF84760.1;transl_table=11 CP001843.1 Genbank gene 3588582 3590372 . - . ID=gene3254;Name=TREPR_0726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0726 CP001843.1 Genbank CDS 3588582 3590372 . - 0 ID=cds3109;Parent=gene3254;Dbxref=NCBI_GP:AEF85155.1;Name=AEF85155.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;product=lipid A export ATP-binding/permease protein MsbA;protein_id=AEF85155.1;transl_table=11 CP001843.1 Genbank gene 3590474 3590953 . + . ID=gene3255;Name=TREPR_0725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0725 CP001843.1 Genbank CDS 3590474 3590953 . + 0 ID=cds3110;Parent=gene3255;Dbxref=NCBI_GP:AEF83542.1;Name=AEF83542.1;gbkey=CDS;product=flavodoxin;protein_id=AEF83542.1;transl_table=11 CP001843.1 Genbank gene 3591057 3591812 . - . ID=gene3256;Name=TREPR_0724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0724 CP001843.1 Genbank CDS 3591057 3591812 . - 0 ID=cds3111;Parent=gene3256;Dbxref=NCBI_GP:AEF86685.1;Name=AEF86685.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=glutamine transport ATP-binding protein GlnQ;protein_id=AEF86685.1;transl_table=11 CP001843.1 Genbank gene 3591799 3592488 . - . ID=gene3257;Name=TREPR_0723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0723 CP001843.1 Genbank CDS 3591799 3592488 . - 0 ID=cds3112;Parent=gene3257;Dbxref=NCBI_GP:AEF85998.1;Name=AEF85998.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;product=amino acid ABC transporter%2C permease protein%2C His/Glu/Gln/Arg/opine family;protein_id=AEF85998.1;transl_table=11 CP001843.1 Genbank gene 3592509 3593330 . - . ID=gene3258;Name=TREPR_0722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0722 CP001843.1 Genbank CDS 3592509 3593330 . - 0 ID=cds3113;Parent=gene3258;Dbxref=NCBI_GP:AEF86550.1;Name=AEF86550.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;product=putative amino acid ABC transporter%2C periplasmic amino acid-binding protein;protein_id=AEF86550.1;transl_table=11 CP001843.1 Genbank gene 3593374 3594570 . - . ID=gene3259;Name=TREPR_0721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0721 CP001843.1 Genbank CDS 3593374 3594570 . - 0 ID=cds3114;Parent=gene3259;Dbxref=NCBI_GP:AEF85591.1;Name=AEF85591.1;Note=identified by match to protein family HMM PF01979;gbkey=CDS;product=putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase);protein_id=AEF85591.1;transl_table=11 CP001843.1 Genbank gene 3594563 3595330 . - . ID=gene3260;Name=TREPR_0720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0720 CP001843.1 Genbank CDS 3594563 3595330 . - 0 ID=cds3115;Parent=gene3260;Dbxref=NCBI_GP:AEF84601.1;Name=AEF84601.1;Note=identified by match to protein family HMM PF00248;gbkey=CDS;product=aldo/keto reductase;protein_id=AEF84601.1;transl_table=11 CP001843.1 Genbank gene 3595330 3596142 . - . ID=gene3261;Name=TREPR_0719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0719 CP001843.1 Genbank CDS 3595330 3596142 . - 0 ID=cds3116;Parent=gene3261;Dbxref=NCBI_GP:AEF83628.1;Name=AEF83628.1;Note=identified by match to protein family HMM PF02633;gbkey=CDS;product=putative creatininase;protein_id=AEF83628.1;transl_table=11 CP001843.1 Genbank pseudogene 3596365 3598536 . + . ID=gene3262;Name=TREPR_0718;Note=BNR repeat domain protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0718;pseudo=true CP001843.1 Genbank gene 3598610 3599254 . - . ID=gene3263;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=TREPR_0717 CP001843.1 Genbank CDS 3598610 3599254 . - 0 ID=cds3117;Parent=gene3263;Dbxref=NCBI_GP:AEF86212.1;Name=AEF86212.1;Note=identified by match to protein family HMM PF01728;gbkey=CDS;gene=rrmJ;product=ribosomal RNA large subunit methyltransferase J;protein_id=AEF86212.1;transl_table=11 CP001843.1 Genbank gene 3599307 3600359 . + . ID=gene3264;Name=TREPR_0716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0716 CP001843.1 Genbank CDS 3599307 3600359 . + 0 ID=cds3118;Parent=gene3264;Dbxref=NCBI_GP:AEF86106.1;Name=AEF86106.1;Note=identified by match to protein family HMM PF00348;gbkey=CDS;product=polyprenyl synthetase family protein;protein_id=AEF86106.1;transl_table=11 CP001843.1 Genbank gene 3600370 3600966 . + . ID=gene3265;Name=TREPR_0715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0715 CP001843.1 Genbank CDS 3600370 3600966 . + 0 ID=cds3119;Parent=gene3265;Dbxref=NCBI_GP:AEF83590.1;Name=AEF83590.1;Note=identified by match to protein family HMM PF02151%3B match to protein family HMM PF02577;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83590.1;transl_table=11 CP001843.1 Genbank gene 3601000 3602013 . + . ID=gene3266;Name=TREPR_0714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0714 CP001843.1 Genbank CDS 3601000 3602013 . + 0 ID=cds3120;Parent=gene3266;Dbxref=NCBI_GP:AEF84570.1;Name=AEF84570.1;Note=identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551;gbkey=CDS;product=LysM domain/M23/M37 peptidase domain protein;protein_id=AEF84570.1;transl_table=11 CP001843.1 Genbank gene 3602036 3604147 . - . ID=gene3267;Name=TREPR_0713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0713 CP001843.1 Genbank CDS 3602036 3604147 . - 0 ID=cds3121;Parent=gene3267;Dbxref=NCBI_GP:AEF85583.1;Name=AEF85583.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85583.1;transl_table=11 CP001843.1 Genbank gene 3604228 3604353 . + . ID=gene3268;Name=TREPR_0712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0712 CP001843.1 Genbank CDS 3604228 3604353 . + 0 ID=cds3122;Parent=gene3268;Dbxref=NCBI_GP:AEF85597.1;Name=AEF85597.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85597.1;transl_table=11 CP001843.1 Genbank gene 3604403 3605737 . + . ID=gene3269;Name=TREPR_0711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0711 CP001843.1 Genbank CDS 3604403 3605737 . + 0 ID=cds3123;Parent=gene3269;Dbxref=NCBI_GP:AEF86548.1;Name=AEF86548.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;product=NADH oxidase (noxase);protein_id=AEF86548.1;transl_table=11 CP001843.1 Genbank gene 3605785 3606852 . - . ID=gene3270;Name=TREPR_0710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0710 CP001843.1 Genbank CDS 3605785 3606852 . - 0 ID=cds3124;Parent=gene3270;Dbxref=NCBI_GP:AEF84041.1;Name=AEF84041.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84041.1;transl_table=11 CP001843.1 Genbank gene 3606861 3607937 . - . ID=gene3271;Name=TREPR_0709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0709 CP001843.1 Genbank CDS 3606861 3607937 . - 0 ID=cds3125;Parent=gene3271;Dbxref=NCBI_GP:AEF85040.1;Name=AEF85040.1;Note=identified by match to protein family HMM PF05343;gbkey=CDS;product=peptidase M42 family;protein_id=AEF85040.1;transl_table=11 CP001843.1 Genbank gene 3607958 3608725 . - . ID=gene3272;Name=TREPR_0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0708 CP001843.1 Genbank CDS 3607958 3608725 . - 0 ID=cds3126;Parent=gene3272;Dbxref=NCBI_GP:AEF87009.1;Name=AEF87009.1;Note=identified by match to protein family HMM PF02633;gbkey=CDS;product=creatininase;protein_id=AEF87009.1;transl_table=11 CP001843.1 Genbank gene 3608782 3610314 . - . ID=gene3273;Name=TREPR_0707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0707 CP001843.1 Genbank CDS 3608782 3610314 . - 0 ID=cds3127;Parent=gene3273;Dbxref=NCBI_GP:AEF84565.1;Name=AEF84565.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=dipeptide-binding protein;protein_id=AEF84565.1;transl_table=11 CP001843.1 Genbank gene 3610360 3611316 . - . ID=gene3274;Name=TREPR_0706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0706 CP001843.1 Genbank CDS 3610360 3611316 . - 0 ID=cds3128;Parent=gene3274;Dbxref=NCBI_GP:AEF85636.1;Name=AEF85636.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF85636.1;transl_table=11 CP001843.1 Genbank gene 3611313 3612347 . - . ID=gene3275;Name=TREPR_0705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0705 CP001843.1 Genbank CDS 3611313 3612347 . - 0 ID=cds3129;Parent=gene3275;Dbxref=NCBI_GP:AEF85749.1;Name=AEF85749.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein OppD;protein_id=AEF85749.1;transl_table=11 CP001843.1 Genbank gene 3612355 3613236 . - . ID=gene3276;Name=TREPR_0704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0704 CP001843.1 Genbank CDS 3612355 3613236 . - 0 ID=cds3130;Parent=gene3276;Dbxref=NCBI_GP:AEF84947.1;Name=AEF84947.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=glutathione transport system permease protein GsiD;protein_id=AEF84947.1;transl_table=11 CP001843.1 Genbank gene 3613233 3614195 . - . ID=gene3277;Name=TREPR_0703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0703 CP001843.1 Genbank CDS 3613233 3614195 . - 0 ID=cds3131;Parent=gene3277;Dbxref=NCBI_GP:AEF84188.1;Name=AEF84188.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=inner membrane ABC transporter permease protein YddR;protein_id=AEF84188.1;transl_table=11 CP001843.1 Genbank gene 3614584 3615585 . + . ID=gene3278;Name=TREPR_0702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0702 CP001843.1 Genbank CDS 3614584 3615585 . + 0 ID=cds3132;Parent=gene3278;Dbxref=NCBI_GP:AEF86090.1;Name=AEF86090.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86090.1;transl_table=11 CP001843.1 Genbank gene 3615582 3616145 . + . ID=gene3279;Name=TREPR_0701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0701 CP001843.1 Genbank CDS 3615582 3616145 . + 0 ID=cds3133;Parent=gene3279;Dbxref=NCBI_GP:AEF84413.1;Name=AEF84413.1;gbkey=CDS;product=death-on-curing family protein;protein_id=AEF84413.1;transl_table=11 CP001843.1 Genbank gene 3616142 3617185 . + . ID=gene3280;Name=TREPR_0700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0700 CP001843.1 Genbank CDS 3616142 3617185 . + 0 ID=cds3134;Parent=gene3280;Dbxref=NCBI_GP:AEF83689.1;Name=AEF83689.1;Note=identified by match to protein family HMM PF01408;gbkey=CDS;product=oxidoreductase;protein_id=AEF83689.1;transl_table=11 CP001843.1 Genbank gene 3617238 3619388 . - . ID=gene3281;Name=TREPR_0699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0699 CP001843.1 Genbank CDS 3617238 3619388 . - 0 ID=cds3135;Parent=gene3281;Dbxref=NCBI_GP:AEF86432.1;Name=AEF86432.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=AEF86432.1;transl_table=11 CP001843.1 Genbank gene 3619341 3619496 . + . ID=gene3282;Name=TREPR_0697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0697 CP001843.1 Genbank CDS 3619341 3619496 . + 0 ID=cds3136;Parent=gene3282;Dbxref=NCBI_GP:AEF84926.1;Name=AEF84926.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84926.1;transl_table=11 CP001843.1 Genbank gene 3619477 3621171 . - . ID=gene3283;Name=TREPR_0698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0698 CP001843.1 Genbank CDS 3619477 3621171 . - 0 ID=cds3137;Parent=gene3283;Dbxref=NCBI_GP:AEF84793.1;Name=AEF84793.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229;gbkey=CDS;product=PAS domain protein;protein_id=AEF84793.1;transl_table=11 CP001843.1 Genbank gene 3621219 3622382 . - . ID=gene3284;Name=TREPR_0696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0696 CP001843.1 Genbank CDS 3621219 3622382 . - 0 ID=cds3138;Parent=gene3284;Dbxref=NCBI_GP:AEF86063.1;Name=AEF86063.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86063.1;transl_table=11 CP001843.1 Genbank gene 3622548 3622620 . + . ID=gene3285;Name=TREPR_3907;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3907 CP001843.1 Genbank tRNA 3622548 3622620 . + . ID=rna54;Parent=gene3285;gbkey=tRNA;product=tRNA-Pro CP001843.1 Genbank exon 3622548 3622620 . + . ID=id60;Parent=rna54;gbkey=tRNA;product=tRNA-Pro CP001843.1 Genbank gene 3622768 3622908 . + . ID=gene3286;Name=TREPR_0694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0694 CP001843.1 Genbank CDS 3622768 3622908 . + 0 ID=cds3139;Parent=gene3286;Dbxref=NCBI_GP:AEF86611.1;Name=AEF86611.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86611.1;transl_table=11 CP001843.1 Genbank gene 3622918 3623625 . - . ID=gene3287;Name=TREPR_0693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0693 CP001843.1 Genbank CDS 3622918 3623625 . - 0 ID=cds3140;Parent=gene3287;Dbxref=NCBI_GP:AEF84482.1;Name=AEF84482.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84482.1;transl_table=11 CP001843.1 Genbank gene 3623640 3624923 . - . ID=gene3288;Name=TREPR_0692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0692 CP001843.1 Genbank CDS 3623640 3624923 . - 0 ID=cds3141;Parent=gene3288;Dbxref=NCBI_GP:AEF85121.1;Name=AEF85121.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;product=metal dependent phosphohydrolase;protein_id=AEF85121.1;transl_table=11 CP001843.1 Genbank gene 3625618 3626850 . + . ID=gene3289;Name=TREPR_0690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0690 CP001843.1 Genbank CDS 3625618 3626850 . + 0 ID=cds3142;Parent=gene3289;Dbxref=NCBI_GP:AEF83999.1;Name=AEF83999.1;Note=identified by match to protein family HMM PF07238;gbkey=CDS;product=type IV pilus assembly protein PilZ;protein_id=AEF83999.1;transl_table=11 CP001843.1 Genbank gene 3626856 3627440 . - . ID=gene3290;Name=TREPR_0689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0689 CP001843.1 Genbank CDS 3626856 3627440 . - 0 ID=cds3143;Parent=gene3290;Dbxref=NCBI_GP:AEF86290.1;Name=AEF86290.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86290.1;transl_table=11 CP001843.1 Genbank gene 3627464 3627802 . - . ID=gene3291;Name=TREPR_0688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0688 CP001843.1 Genbank CDS 3627464 3627802 . - 0 ID=cds3144;Parent=gene3291;Dbxref=NCBI_GP:AEF85081.1;Name=AEF85081.1;Note=identified by match to protein family HMM PF01740%3B match to protein family HMM TIGR00377;gbkey=CDS;product=anti-anti-sigma factor;protein_id=AEF85081.1;transl_table=11 CP001843.1 Genbank gene 3627967 3628974 . + . ID=gene3292;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=TREPR_0687 CP001843.1 Genbank CDS 3627967 3628974 . + 0 ID=cds3145;Parent=gene3292;Dbxref=NCBI_GP:AEF85338.1;Name=AEF85338.1;Note=identified by match to protein family HMM PF02603%3B match to protein family HMM PF07475%3B match to protein family HMM TIGR00679;gbkey=CDS;gene=hprK;product=HPr(Ser) kinase/phosphatase;protein_id=AEF85338.1;transl_table=11 CP001843.1 Genbank gene 3628991 3629257 . + . ID=gene3293;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=TREPR_0686 CP001843.1 Genbank CDS 3628991 3629257 . + 0 ID=cds3146;Parent=gene3293;Dbxref=NCBI_GP:AEF86095.1;Name=AEF86095.1;Note=identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003;gbkey=CDS;gene=ptsH;product=phosphocarrier protein HPr;protein_id=AEF86095.1;transl_table=11 CP001843.1 Genbank gene 3629271 3631067 . + . ID=gene3294;Name=TREPR_0685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0685 CP001843.1 Genbank CDS 3629271 3631067 . + 0 ID=cds3147;Parent=gene3294;Dbxref=NCBI_GP:AEF86769.1;Name=AEF86769.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=histidine kinase;protein_id=AEF86769.1;transl_table=11 CP001843.1 Genbank gene 3631064 3632449 . + . ID=gene3295;Name=TREPR_0684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0684 CP001843.1 Genbank CDS 3631064 3632449 . + 0 ID=cds3148;Parent=gene3295;Dbxref=NCBI_GP:AEF84031.1;Name=AEF84031.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954;gbkey=CDS;product=nitrogen assimilation regulatory protein NtrX;protein_id=AEF84031.1;transl_table=11 CP001843.1 Genbank gene 3632446 3633066 . + . ID=gene3296;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=TREPR_0683 CP001843.1 Genbank CDS 3632446 3633066 . + 0 ID=cds3149;Parent=gene3296;Dbxref=NCBI_GP:AEF85709.1;Name=AEF85709.1;Note=identified by match to protein family HMM PF00717%3B match to protein family HMM PF01726%3B match to protein family HMM TIGR00498;gbkey=CDS;gene=lexA;product=LexA repressor;protein_id=AEF85709.1;transl_table=11 CP001843.1 Genbank gene 3633074 3634042 . + . ID=gene3297;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=TREPR_0682 CP001843.1 Genbank CDS 3633074 3634042 . + 0 ID=cds3150;Parent=gene3297;Dbxref=NCBI_GP:AEF86481.1;Name=AEF86481.1;Note=identified by match to protein family HMM PF06144%3B match to protein family HMM TIGR01128;gbkey=CDS;gene=holA;product=DNA polymerase III%2C delta subunit;protein_id=AEF86481.1;transl_table=11 CP001843.1 Genbank gene 3634062 3636128 . - . ID=gene3298;Name=TREPR_0681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0681 CP001843.1 Genbank CDS 3634062 3636128 . - 0 ID=cds3151;Parent=gene3298;Dbxref=NCBI_GP:AEF85252.1;Name=AEF85252.1;Note=identified by match to protein family HMM PF00359%3B match to protein family HMM PF00999;gbkey=CDS;product=Na+/H+ antiporter;protein_id=AEF85252.1;transl_table=11 CP001843.1 Genbank gene 3636375 3637187 . - . ID=gene3299;Name=TREPR_0680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0680 CP001843.1 Genbank CDS 3636375 3637187 . - 0 ID=cds3152;Parent=gene3299;Dbxref=NCBI_GP:AEF84210.1;Name=AEF84210.1;Note=identified by match to protein family HMM PF01048;gbkey=CDS;product=phosphorylase family protein;protein_id=AEF84210.1;transl_table=11 CP001843.1 Genbank gene 3637291 3638487 . - . ID=gene3300;Name=TREPR_0679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0679 CP001843.1 Genbank CDS 3637291 3638487 . - 0 ID=cds3153;Parent=gene3300;Dbxref=NCBI_GP:AEF83693.1;Name=AEF83693.1;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF83693.1;transl_table=11 CP001843.1 Genbank gene 3638678 3639934 . - . ID=gene3301;Name=TREPR_0677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0677 CP001843.1 Genbank CDS 3638678 3639934 . - 0 ID=cds3154;Parent=gene3301;Dbxref=NCBI_GP:AEF85660.1;Name=AEF85660.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF85660.1;transl_table=11 CP001843.1 Genbank gene 3640074 3641318 . - . ID=gene3302;Name=TREPR_0676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0676 CP001843.1 Genbank CDS 3640074 3641318 . - 0 ID=cds3155;Parent=gene3302;Dbxref=NCBI_GP:AEF84622.1;Name=AEF84622.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=radical SAM domain protein;protein_id=AEF84622.1;transl_table=11 CP001843.1 Genbank gene 3641340 3642317 . - . ID=gene3303;Name=TREPR_0675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0675 CP001843.1 Genbank CDS 3641340 3642317 . - 0 ID=cds3156;Parent=gene3303;Dbxref=NCBI_GP:AEF84923.1;Name=AEF84923.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF84923.1;transl_table=11 CP001843.1 Genbank gene 3642310 3643341 . - . ID=gene3304;Name=TREPR_0674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0674 CP001843.1 Genbank CDS 3642310 3643341 . - 0 ID=cds3157;Parent=gene3304;Dbxref=NCBI_GP:AEF83812.1;Name=AEF83812.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=oligopeptide transport ATP-binding protein OppD;protein_id=AEF83812.1;transl_table=11 CP001843.1 Genbank gene 3643341 3644273 . - . ID=gene3305;Name=TREPR_0673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0673 CP001843.1 Genbank CDS 3643341 3644273 . - 0 ID=cds3158;Parent=gene3305;Dbxref=NCBI_GP:AEF86349.1;Name=AEF86349.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=glutathione transport system permease protein GsiD;protein_id=AEF86349.1;transl_table=11 CP001843.1 Genbank gene 3644307 3645257 . - . ID=gene3306;Name=TREPR_0672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0672 CP001843.1 Genbank CDS 3644307 3645257 . - 0 ID=cds3159;Parent=gene3306;Dbxref=NCBI_GP:AEF85384.1;Name=AEF85384.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein AppB;protein_id=AEF85384.1;transl_table=11 CP001843.1 Genbank gene 3645321 3646907 . - . ID=gene3307;Name=TREPR_0671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0671 CP001843.1 Genbank CDS 3645321 3646907 . - 0 ID=cds3160;Parent=gene3307;Dbxref=NCBI_GP:AEF84085.1;Name=AEF84085.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=putative ABC transporter peptide-binding protein;protein_id=AEF84085.1;transl_table=11 CP001843.1 Genbank gene 3647261 3648622 . - . ID=gene3308;Name=TREPR_0670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0670 CP001843.1 Genbank CDS 3647261 3648622 . - 0 ID=cds3161;Parent=gene3308;Dbxref=NCBI_GP:AEF85020.1;Name=AEF85020.1;Note=identified by match to protein family HMM PF01170%3B match to protein family HMM PF03602%3B match to protein family HMM PF05175;gbkey=CDS;product=PUA domain protein;protein_id=AEF85020.1;transl_table=11 CP001843.1 Genbank gene 3648628 3650829 . - . ID=gene3309;Name=ppk;gbkey=Gene;gene=ppk;gene_biotype=protein_coding;locus_tag=TREPR_0669 CP001843.1 Genbank CDS 3648628 3650829 . - 0 ID=cds3162;Parent=gene3309;Dbxref=NCBI_GP:AEF86062.1;Name=AEF86062.1;Note=identified by match to protein family HMM PF02503;gbkey=CDS;gene=ppk;product=polyphosphate kinase;protein_id=AEF86062.1;transl_table=11 CP001843.1 Genbank gene 3650860 3652398 . - . ID=gene3310;Name=TREPR_0668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0668 CP001843.1 Genbank CDS 3650860 3652398 . - 0 ID=cds3163;Parent=gene3310;Dbxref=NCBI_GP:AEF85297.1;Name=AEF85297.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM PF02541;gbkey=CDS;product=putative exopolyphosphatase;protein_id=AEF85297.1;transl_table=11 CP001843.1 Genbank gene 3652402 3653826 . - . ID=gene3311;Name=TREPR_0667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0667 CP001843.1 Genbank CDS 3652402 3653826 . - 0 ID=cds3164;Parent=gene3311;Dbxref=NCBI_GP:AEF86028.1;Name=AEF86028.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86028.1;transl_table=11 CP001843.1 Genbank gene 3654073 3656622 . + . ID=gene3312;Name=TREPR_0665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0665 CP001843.1 Genbank CDS 3654073 3656622 . + 0 ID=cds3165;Parent=gene3312;Dbxref=NCBI_GP:AEF83645.1;Name=AEF83645.1;Note=identified by match to protein family HMM PF02637%3B match to protein family HMM PF02934;gbkey=CDS;product=putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B);protein_id=AEF83645.1;transl_table=11 CP001843.1 Genbank gene 3656676 3657524 . - . ID=gene3313;Name=TREPR_0664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0664 CP001843.1 Genbank CDS 3656676 3657524 . - 0 ID=cds3166;Parent=gene3313;Dbxref=NCBI_GP:AEF86404.1;Name=AEF86404.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF86404.1;transl_table=11 CP001843.1 Genbank gene 3657613 3659478 . + . ID=gene3314;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=TREPR_0663 CP001843.1 Genbank CDS 3657613 3659478 . + 0 ID=cds3167;Parent=gene3314;Dbxref=NCBI_GP:AEF84918.1;Name=AEF84918.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF04073%3B match to protein family HMM TIGR00409;gbkey=CDS;gene=proS;product=proline--tRNA ligase;protein_id=AEF84918.1;transl_table=11 CP001843.1 Genbank gene 3659510 3659800 . - . ID=gene3315;Name=TREPR_0662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0662 CP001843.1 Genbank CDS 3659510 3659800 . - 0 ID=cds3168;Parent=gene3315;Dbxref=NCBI_GP:AEF84153.1;Name=AEF84153.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84153.1;transl_table=11 CP001843.1 Genbank gene 3659824 3660540 . - . ID=gene3316;Name=TREPR_0661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0661 CP001843.1 Genbank CDS 3659824 3660540 . - 0 ID=cds3169;Parent=gene3316;Dbxref=NCBI_GP:AEF86012.1;Name=AEF86012.1;Note=identified by match to protein family HMM PF04909;gbkey=CDS;product=putative amidohydrolase 2;protein_id=AEF86012.1;transl_table=11 CP001843.1 Genbank gene 3660546 3661373 . - . ID=gene3317;Name=TREPR_0660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0660 CP001843.1 Genbank CDS 3660546 3661373 . - 0 ID=cds3170;Parent=gene3317;Dbxref=NCBI_GP:AEF87010.1;Name=AEF87010.1;Note=identified by match to protein family HMM PF00459;gbkey=CDS;product=inositol-1-monophosphatase;protein_id=AEF87010.1;transl_table=11 CP001843.1 Genbank gene 3661382 3662446 . - . ID=gene3318;Name=TREPR_0659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0659 CP001843.1 Genbank CDS 3661382 3662446 . - 0 ID=cds3171;Parent=gene3318;Dbxref=NCBI_GP:AEF86253.1;Name=AEF86253.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402;gbkey=CDS;product=spermidine/putrescine ABC transporter ATP-binding subunit;protein_id=AEF86253.1;transl_table=11 CP001843.1 Genbank gene 3662488 3664149 . - . ID=gene3319;Name=TREPR_0658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0658 CP001843.1 Genbank CDS 3662488 3664149 . - 0 ID=cds3172;Parent=gene3319;Dbxref=NCBI_GP:AEF83644.1;Name=AEF83644.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=iron(III) dicitrate transport ATP-binding protein FecE;protein_id=AEF83644.1;transl_table=11 CP001843.1 Genbank gene 3664210 3665265 . - . ID=gene3320;Name=TREPR_0657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0657 CP001843.1 Genbank CDS 3664210 3665265 . - 0 ID=cds3173;Parent=gene3320;Dbxref=NCBI_GP:AEF84904.1;Name=AEF84904.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=iron ABC transporter substrate-binding protein;protein_id=AEF84904.1;transl_table=11 CP001843.1 Genbank gene 3665304 3666080 . - . ID=gene3321;Name=TREPR_0656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0656 CP001843.1 Genbank CDS 3665304 3666080 . - 0 ID=cds3174;Parent=gene3321;Dbxref=NCBI_GP:AEF85701.1;Name=AEF85701.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659;gbkey=CDS;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=AEF85701.1;transl_table=11 CP001843.1 Genbank gene 3666099 3667622 . - . ID=gene3322;Name=TREPR_0655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0655 CP001843.1 Genbank CDS 3666099 3667622 . - 0 ID=cds3175;Parent=gene3322;Dbxref=NCBI_GP:AEF84822.1;Name=AEF84822.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782;gbkey=CDS;product=sugar kinase%2C fggy family;protein_id=AEF84822.1;transl_table=11 CP001843.1 Genbank gene 3667715 3667828 . - . ID=gene3323;Name=TREPR_0654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0654 CP001843.1 Genbank CDS 3667715 3667828 . - 0 ID=cds3176;Parent=gene3323;Dbxref=NCBI_GP:AEF83852.1;Name=AEF83852.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83852.1;transl_table=11 CP001843.1 Genbank gene 3667779 3668837 . + . ID=gene3324;Name=TREPR_0653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0653 CP001843.1 Genbank CDS 3667779 3668837 . + 0 ID=cds3177;Parent=gene3324;Dbxref=NCBI_GP:AEF87000.1;Name=AEF87000.1;Note=identified by match to protein family HMM PF07669;gbkey=CDS;product=modification methylase PstI (Adenine-specificmethyltransferase PstI) (M.PstI);protein_id=AEF87000.1;transl_table=11 CP001843.1 Genbank gene 3668937 3669338 . + . ID=gene3325;Name=TREPR_0652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0652 CP001843.1 Genbank CDS 3668937 3669338 . + 0 ID=cds3178;Parent=gene3325;Dbxref=NCBI_GP:AEF85870.1;Name=AEF85870.1;gbkey=CDS;product=type II restriction enzyme BsuBI (Endonuclease BsuBI)(R.BsuBI);protein_id=AEF85870.1;transl_table=11 CP001843.1 Genbank gene 3669382 3670476 . + . ID=gene3326;Name=TREPR_0651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0651 CP001843.1 Genbank CDS 3669382 3670476 . + 0 ID=cds3179;Parent=gene3326;Dbxref=NCBI_GP:AEF85601.1;Name=AEF85601.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=transcriptional Regulator%2C LacI family;protein_id=AEF85601.1;transl_table=11 CP001843.1 Genbank gene 3670577 3671506 . + . ID=gene3327;Name=TREPR_0650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0650 CP001843.1 Genbank CDS 3670577 3671506 . + 0 ID=cds3180;Parent=gene3327;Dbxref=NCBI_GP:AEF86577.1;Name=AEF86577.1;Note=identified by match to protein family HMM PF00691;gbkey=CDS;product=OmpA family protein;protein_id=AEF86577.1;transl_table=11 CP001843.1 Genbank gene 3671619 3673412 . - . ID=gene3328;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=TREPR_0649 CP001843.1 Genbank CDS 3671619 3673412 . - 0 ID=cds3181;Parent=gene3328;Dbxref=NCBI_GP:AEF83567.1;Name=AEF83567.1;Note=identified by match to protein family HMM PF00224%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064;gbkey=CDS;gene=pyk;product=pyruvate kinase;protein_id=AEF83567.1;transl_table=11 CP001843.1 Genbank gene 3673499 3675490 . - . ID=gene3329;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=TREPR_0648 CP001843.1 Genbank CDS 3673499 3675490 . - 0 ID=cds3182;Parent=gene3329;Dbxref=NCBI_GP:AEF84617.1;Name=AEF84617.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM TIGR00631;gbkey=CDS;gene=uvrB;product=excinuclease ABC%2C B subunit;protein_id=AEF84617.1;transl_table=11 CP001843.1 Genbank gene 3675671 3676234 . + . ID=gene3330;Name=TREPR_0647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0647 CP001843.1 Genbank CDS 3675671 3676234 . + 0 ID=cds3183;Parent=gene3330;Dbxref=NCBI_GP:AEF85695.1;Name=AEF85695.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF85695.1;transl_table=11 CP001843.1 Genbank gene 3676334 3677143 . + . ID=gene3331;Name=TREPR_0646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0646 CP001843.1 Genbank CDS 3676334 3677143 . + 0 ID=cds3184;Parent=gene3331;Dbxref=NCBI_GP:AEF84913.1;Name=AEF84913.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84913.1;transl_table=11 CP001843.1 Genbank gene 3677187 3678344 . + . ID=gene3332;Name=TREPR_0645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0645 CP001843.1 Genbank CDS 3677187 3678344 . + 0 ID=cds3185;Parent=gene3332;Dbxref=NCBI_GP:AEF86254.1;Name=AEF86254.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86254.1;transl_table=11 CP001843.1 Genbank gene 3678461 3679972 . + . ID=gene3333;Name=TREPR_0644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0644 CP001843.1 Genbank CDS 3678461 3679972 . + 0 ID=cds3186;Parent=gene3333;Dbxref=NCBI_GP:AEF85488.1;Name=AEF85488.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85488.1;transl_table=11 CP001843.1 Genbank gene 3680035 3681294 . - . ID=gene3334;Name=TREPR_0643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0643 CP001843.1 Genbank CDS 3680035 3681294 . - 0 ID=cds3187;Parent=gene3334;Dbxref=NCBI_GP:AEF84991.1;Name=AEF84991.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84991.1;transl_table=11 CP001843.1 Genbank gene 3681698 3682432 . - . ID=gene3335;Name=TREPR_0641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0641 CP001843.1 Genbank CDS 3681698 3682432 . - 0 ID=cds3188;Parent=gene3335;Dbxref=NCBI_GP:AEF86894.1;Name=AEF86894.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;product=putative hydrolase;protein_id=AEF86894.1;transl_table=11 CP001843.1 Genbank gene 3682513 3683697 . + . ID=gene3336;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=TREPR_0640 CP001843.1 Genbank CDS 3682513 3683697 . + 0 ID=cds3189;Parent=gene3336;Dbxref=NCBI_GP:AEF86099.1;Name=AEF86099.1;Note=identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033;gbkey=CDS;gene=aroC;product=chorismate synthase;protein_id=AEF86099.1;transl_table=11 CP001843.1 Genbank gene 3683761 3685104 . + . ID=gene3337;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=TREPR_0639 CP001843.1 Genbank CDS 3683761 3685104 . + 0 ID=cds3190;Parent=gene3337;Dbxref=NCBI_GP:AEF84513.1;Name=AEF84513.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03156;gbkey=CDS;gene=hflX;product=GTP-binding protein HflX;protein_id=AEF84513.1;transl_table=11 CP001843.1 Genbank gene 3685111 3687729 . - . ID=gene3338;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=TREPR_0638 CP001843.1 Genbank CDS 3685111 3687729 . - 0 ID=cds3191;Parent=gene3338;Dbxref=NCBI_GP:AEF83552.1;Name=AEF83552.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR03346;gbkey=CDS;gene=clpB;product=ATP-dependent chaperone ClpB;protein_id=AEF83552.1;transl_table=11 CP001843.1 Genbank gene 3687811 3688800 . + . ID=gene3339;Name=TREPR_0637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0637 CP001843.1 Genbank CDS 3687811 3688800 . + 0 ID=cds3192;Parent=gene3339;Dbxref=NCBI_GP:AEF83543.1;Name=AEF83543.1;Note=identified by match to protein family HMM PF01758;gbkey=CDS;product=bile acid:sodium symporter;protein_id=AEF83543.1;transl_table=11 CP001843.1 Genbank gene 3688904 3690136 . + . ID=gene3340;Name=TREPR_0636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0636 CP001843.1 Genbank CDS 3688904 3690136 . + 0 ID=cds3193;Parent=gene3340;Dbxref=NCBI_GP:AEF86509.1;Name=AEF86509.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;product=putative Fe-S oxidoreductase;protein_id=AEF86509.1;transl_table=11 CP001843.1 Genbank gene 3690133 3691356 . + . ID=gene3341;Name=TREPR_0635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0635 CP001843.1 Genbank CDS 3690133 3691356 . + 0 ID=cds3194;Parent=gene3341;Dbxref=NCBI_GP:AEF85694.1;Name=AEF85694.1;Note=identified by match to protein family HMM PF03033;gbkey=CDS;product=glycosyltransferase family 1%2C candidate beta-glycosyltransferase;protein_id=AEF85694.1;transl_table=11 CP001843.1 Genbank gene 3691369 3692631 . + . ID=gene3342;Name=TREPR_0633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0633 CP001843.1 Genbank CDS 3691369 3692631 . + 0 ID=cds3195;Parent=gene3342;Dbxref=NCBI_GP:AEF83557.1;Name=AEF83557.1;Note=identified by match to protein family HMM PF03033;gbkey=CDS;product=glycosyltransferase family 1%2C candidate beta-glycosyltransferase;protein_id=AEF83557.1;transl_table=11 CP001843.1 Genbank gene 3692603 3693778 . - . ID=gene3343;Name=TREPR_0634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0634 CP001843.1 Genbank CDS 3692603 3693778 . - 0 ID=cds3196;Parent=gene3343;Dbxref=NCBI_GP:AEF86293.1;Name=AEF86293.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;product=aminotransferase YbdL;protein_id=AEF86293.1;transl_table=11 CP001843.1 Genbank gene 3693797 3694231 . - . ID=gene3344;Name=TREPR_0632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0632 CP001843.1 Genbank CDS 3693797 3694231 . - 0 ID=cds3197;Parent=gene3344;Dbxref=NCBI_GP:AEF86098.1;Name=AEF86098.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;product=transcriptional regulator%2C BadM/Rrf2 family;protein_id=AEF86098.1;transl_table=11 CP001843.1 Genbank gene 3694228 3694662 . - . ID=gene3345;Name=TREPR_0631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0631 CP001843.1 Genbank CDS 3694228 3694662 . - 0 ID=cds3198;Parent=gene3345;Dbxref=NCBI_GP:AEF86660.1;Name=AEF86660.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;product=RRF2-family transcriptional regulator;protein_id=AEF86660.1;transl_table=11 CP001843.1 Genbank gene 3694813 3696045 . - . ID=gene3346;Name=TREPR_0630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0630 CP001843.1 Genbank CDS 3694813 3696045 . - 0 ID=cds3199;Parent=gene3346;Dbxref=NCBI_GP:AEF85447.1;Name=AEF85447.1;Note=identified by match to protein family HMM PF01053;gbkey=CDS;product=cystathionine gamma-lyase;protein_id=AEF85447.1;transl_table=11 CP001843.1 Genbank gene 3696055 3697200 . - . ID=gene3347;Name=TREPR_0629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0629 CP001843.1 Genbank CDS 3696055 3697200 . - 0 ID=cds3200;Parent=gene3347;Dbxref=NCBI_GP:AEF84440.1;Name=AEF84440.1;Note=identified by match to protein family HMM PF01053;gbkey=CDS;product=cystathionine gamma-lyase;protein_id=AEF84440.1;transl_table=11 CP001843.1 Genbank pseudogene 3697390 3697782 . + . ID=gene3348;Name=TREPR_0628;Note=ferrous iron transport protein B%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF04023;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0628;pseudo=true CP001843.1 Genbank gene 3697769 3699934 . + . ID=gene3349;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=TREPR_0627 CP001843.1 Genbank CDS 3697769 3699934 . + 0 ID=cds3201;Parent=gene3349;Dbxref=NCBI_GP:AEF85391.1;Name=AEF85391.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00437;gbkey=CDS;gene=feoB;product=ferrous iron transport protein B;protein_id=AEF85391.1;transl_table=11 CP001843.1 Genbank gene 3700288 3701397 . - . ID=gene3350;Name=TREPR_0626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0626 CP001843.1 Genbank CDS 3700288 3701397 . - 0 ID=cds3202;Parent=gene3350;Dbxref=NCBI_GP:AEF86366.1;Name=AEF86366.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86366.1;transl_table=11 CP001843.1 Genbank gene 3701398 3701871 . - . ID=gene3351;Name=TREPR_0625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0625 CP001843.1 Genbank CDS 3701398 3701871 . - 0 ID=cds3203;Parent=gene3351;Dbxref=NCBI_GP:AEF85574.1;Name=AEF85574.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=putative MutT/nudix family protein;protein_id=AEF85574.1;transl_table=11 CP001843.1 Genbank gene 3701959 3702798 . - . ID=gene3352;Name=TREPR_0624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0624 CP001843.1 Genbank CDS 3701959 3702798 . - 0 ID=cds3204;Parent=gene3352;Dbxref=NCBI_GP:AEF84156.1;Name=AEF84156.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84156.1;transl_table=11 CP001843.1 Genbank gene 3702811 3703653 . - . ID=gene3353;Name=TREPR_0623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0623 CP001843.1 Genbank CDS 3702811 3703653 . - 0 ID=cds3205;Parent=gene3353;Dbxref=NCBI_GP:AEF86612.1;Name=AEF86612.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86612.1;transl_table=11 CP001843.1 Genbank gene 3703664 3704242 . - . ID=gene3354;Name=TREPR_0622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0622 CP001843.1 Genbank CDS 3703664 3704242 . - 0 ID=cds3206;Parent=gene3354;Dbxref=NCBI_GP:AEF86163.1;Name=AEF86163.1;Note=identified by match to protein family HMM PF01661;gbkey=CDS;product=appr-1-p processing domain protein;protein_id=AEF86163.1;transl_table=11 CP001843.1 Genbank gene 3704358 3705389 . - . ID=gene3355;Name=TREPR_0621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0621 CP001843.1 Genbank CDS 3704358 3705389 . - 0 ID=cds3207;Parent=gene3355;Dbxref=NCBI_GP:AEF84315.1;Name=AEF84315.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84315.1;transl_table=11 CP001843.1 Genbank gene 3705708 3705781 . + . ID=gene3356;Name=TREPR_3906;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3906 CP001843.1 Genbank tRNA 3705708 3705781 . + . ID=rna55;Parent=gene3356;gbkey=tRNA;product=tRNA-Ile CP001843.1 Genbank exon 3705708 3705781 . + . ID=id61;Parent=rna55;gbkey=tRNA;product=tRNA-Ile CP001843.1 Genbank gene 3705845 3706693 . + . ID=gene3357;Name=TREPR_0618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0618 CP001843.1 Genbank CDS 3705845 3706693 . + 0 ID=cds3208;Parent=gene3357;Dbxref=NCBI_GP:AEF85457.1;Name=AEF85457.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85457.1;transl_table=11 CP001843.1 Genbank gene 3706705 3708108 . - . ID=gene3358;Name=TREPR_0617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0617 CP001843.1 Genbank CDS 3706705 3708108 . - 0 ID=cds3209;Parent=gene3358;Dbxref=NCBI_GP:AEF85064.1;Name=AEF85064.1;Note=identified by match to protein family HMM PF00560;gbkey=CDS;product=adenylate cyclase (ATP pyrophosphate-lyase) (Adenylylcyclase);protein_id=AEF85064.1;transl_table=11 CP001843.1 Genbank gene 3708286 3710994 . - . ID=gene3359;Name=TREPR_0616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0616 CP001843.1 Genbank CDS 3708286 3710994 . - 0 ID=cds3210;Parent=gene3359;Dbxref=NCBI_GP:AEF84402.1;Name=AEF84402.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229;gbkey=CDS;product=PAS domain protein;protein_id=AEF84402.1;transl_table=11 CP001843.1 Genbank gene 3711025 3712401 . - . ID=gene3360;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=TREPR_0615 CP001843.1 Genbank CDS 3711025 3712401 . - 0 ID=cds3211;Parent=gene3360;Dbxref=NCBI_GP:AEF83664.1;Name=AEF83664.1;Note=identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959;gbkey=CDS;gene=ffh;product=signal recognition particle protein;protein_id=AEF83664.1;transl_table=11 CP001843.1 Genbank gene 3712405 3713472 . - . ID=gene3361;Name=TREPR_0614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0614 CP001843.1 Genbank CDS 3712405 3713472 . - 0 ID=cds3212;Parent=gene3361;Dbxref=NCBI_GP:AEF84325.1;Name=AEF84325.1;Note=identified by match to protein family HMM PF01210%3B match to protein family HMM PF07479;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase);protein_id=AEF84325.1;transl_table=11 CP001843.1 Genbank gene 3713564 3715447 . - . ID=gene3362;Name=TREPR_0613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0613 CP001843.1 Genbank CDS 3713564 3715447 . - 0 ID=cds3213;Parent=gene3362;Dbxref=NCBI_GP:AEF86649.1;Name=AEF86649.1;Note=identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR02290;gbkey=CDS;product=oligoendopeptidase%2C PepF/M3 family;protein_id=AEF86649.1;transl_table=11 CP001843.1 Genbank gene 3715431 3715874 . - . ID=gene3363;Name=TREPR_0612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0612 CP001843.1 Genbank CDS 3715431 3715874 . - 0 ID=cds3214;Parent=gene3363;Dbxref=NCBI_GP:AEF84594.1;Name=AEF84594.1;Note=identified by match to protein family HMM PF00334;gbkey=CDS;product=nucleoside-diphosphate kinase;protein_id=AEF84594.1;transl_table=11 CP001843.1 Genbank gene 3715934 3717775 . - . ID=gene3364;Name=TREPR_0611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0611 CP001843.1 Genbank CDS 3715934 3717775 . - 0 ID=cds3215;Parent=gene3364;Dbxref=NCBI_GP:AEF85092.1;Name=AEF85092.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF08497;gbkey=CDS;product=radical SAM N- domain protein;protein_id=AEF85092.1;transl_table=11 CP001843.1 Genbank gene 3717765 3717989 . - . ID=gene3365;Name=TREPR_0610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0610 CP001843.1 Genbank CDS 3717765 3717989 . - 0 ID=cds3216;Parent=gene3365;Dbxref=NCBI_GP:AEF85513.1;Name=AEF85513.1;Note=identified by match to protein family HMM PF01106;gbkey=CDS;product=iron-sulfur cluster-binding protein%2C Rieske family;protein_id=AEF85513.1;transl_table=11 CP001843.1 Genbank gene 3718180 3719538 . + . ID=gene3366;Name=TREPR_0608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0608 CP001843.1 Genbank CDS 3718180 3719538 . + 0 ID=cds3217;Parent=gene3366;Dbxref=NCBI_GP:AEF85190.1;Name=AEF85190.1;Note=identified by match to protein family HMM PF00365;gbkey=CDS;product=diphosphate--fructose-6-phosphate 1-phosphotransferase;protein_id=AEF85190.1;transl_table=11 CP001843.1 Genbank gene 3719535 3720398 . - . ID=gene3367;Name=TREPR_0609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0609 CP001843.1 Genbank CDS 3719535 3720398 . - 0 ID=cds3218;Parent=gene3367;Dbxref=NCBI_GP:AEF84663.1;Name=AEF84663.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84663.1;transl_table=11 CP001843.1 Genbank gene 3720400 3721176 . - . ID=gene3368;Name=TREPR_0607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0607 CP001843.1 Genbank CDS 3720400 3721176 . - 0 ID=cds3219;Parent=gene3368;Dbxref=NCBI_GP:AEF86180.1;Name=AEF86180.1;Note=identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032;gbkey=CDS;product=RNA methyltransferase%2C TrmH family;protein_id=AEF86180.1;transl_table=11 CP001843.1 Genbank gene 3721205 3721600 . - . ID=gene3369;Name=TREPR_0606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0606 CP001843.1 Genbank CDS 3721205 3721600 . - 0 ID=cds3220;Parent=gene3369;Dbxref=NCBI_GP:AEF86647.1;Name=AEF86647.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=putative virulence-associated protein;protein_id=AEF86647.1;transl_table=11 CP001843.1 Genbank gene 3721600 3721875 . - . ID=gene3370;Name=TREPR_0605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0605 CP001843.1 Genbank CDS 3721600 3721875 . - 0 ID=cds3221;Parent=gene3370;Dbxref=NCBI_GP:AEF86034.1;Name=AEF86034.1;gbkey=CDS;product=putative virulence protein;protein_id=AEF86034.1;transl_table=11 CP001843.1 Genbank gene 3722016 3723242 . - . ID=gene3371;Name=TREPR_0604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0604 CP001843.1 Genbank CDS 3722016 3723242 . - 0 ID=cds3222;Parent=gene3371;Dbxref=NCBI_GP:AEF85428.1;Name=AEF85428.1;Note=identified by match to protein family HMM PF03372;gbkey=CDS;product=putative endonuclease/exonuclease/phosphatase family protein;protein_id=AEF85428.1;transl_table=11 CP001843.1 Genbank gene 3723335 3724156 . - . ID=gene3372;Name=TREPR_0603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0603 CP001843.1 Genbank CDS 3723335 3724156 . - 0 ID=cds3223;Parent=gene3372;Dbxref=NCBI_GP:AEF84697.1;Name=AEF84697.1;Note=identified by match to protein family HMM PF04972;gbkey=CDS;product=Putative phospholipid-binding domain family protein;protein_id=AEF84697.1;transl_table=11 CP001843.1 Genbank gene 3724282 3724866 . + . ID=gene3373;Name=TREPR_0601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0601 CP001843.1 Genbank CDS 3724282 3724866 . + 0 ID=cds3224;Parent=gene3373;Dbxref=NCBI_GP:AEF87029.1;Name=AEF87029.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;product=MutT/NUDIX family protein;protein_id=AEF87029.1;transl_table=11 CP001843.1 Genbank gene 3724848 3725576 . - . ID=gene3374;Name=TREPR_0602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0602 CP001843.1 Genbank CDS 3724848 3725576 . - 0 ID=cds3225;Parent=gene3374;Dbxref=NCBI_GP:AEF83653.1;Name=AEF83653.1;gbkey=CDS;product=treponemal membrane protein B (Antigen TmpB);protein_id=AEF83653.1;transl_table=11 CP001843.1 Genbank gene 3725573 3726742 . - . ID=gene3375;Name=TREPR_0600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0600 CP001843.1 Genbank CDS 3725573 3726742 . - 0 ID=cds3226;Parent=gene3375;Dbxref=NCBI_GP:AEF84022.1;Name=AEF84022.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84022.1;transl_table=11 CP001843.1 Genbank gene 3726911 3727141 . + . ID=gene3376;Name=TREPR_0599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0599 CP001843.1 Genbank CDS 3726911 3727141 . + 0 ID=cds3227;Parent=gene3376;Dbxref=NCBI_GP:AEF83928.1;Name=AEF83928.1;gbkey=CDS;product=conserved domain protein;protein_id=AEF83928.1;transl_table=11 CP001843.1 Genbank gene 3727145 3727591 . + . ID=gene3377;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=TREPR_0598 CP001843.1 Genbank CDS 3727145 3727591 . + 0 ID=cds3228;Parent=gene3377;Dbxref=NCBI_GP:AEF86401.1;Name=AEF86401.1;Note=identified by match to protein family HMM PF00075;gbkey=CDS;gene=rnhA;product=ribonuclease HI;protein_id=AEF86401.1;transl_table=11 CP001843.1 Genbank gene 3727635 3728633 . - . ID=gene3378;Name=TREPR_0597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0597 CP001843.1 Genbank CDS 3727635 3728633 . - 0 ID=cds3229;Parent=gene3378;Dbxref=NCBI_GP:AEF85437.1;Name=AEF85437.1;Note=identified by match to protein family HMM PF01408%3B match to protein family HMM PF02894;gbkey=CDS;product=oxidoreductase;protein_id=AEF85437.1;transl_table=11 CP001843.1 Genbank gene 3728822 3730468 . + . ID=gene3379;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=TREPR_0596 CP001843.1 Genbank CDS 3728822 3730468 . + 0 ID=cds3230;Parent=gene3379;Dbxref=NCBI_GP:AEF84467.1;Name=AEF84467.1;Note=identified by match to protein family HMM PF00118%3B match to protein family HMM TIGR02348;gbkey=CDS;gene=groL;product=chaperonin GroL;protein_id=AEF84467.1;transl_table=11 CP001843.1 Genbank gene 3730643 3731392 . + . ID=gene3380;Name=TREPR_0595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0595 CP001843.1 Genbank CDS 3730643 3731392 . + 0 ID=cds3231;Parent=gene3380;Dbxref=NCBI_GP:AEF84238.1;Name=AEF84238.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;product=transcriptional regulator%2C GntR family;protein_id=AEF84238.1;transl_table=11 CP001843.1 Genbank gene 3731498 3732508 . + . ID=gene3381;Name=TREPR_0594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0594 CP001843.1 Genbank CDS 3731498 3732508 . + 0 ID=cds3232;Parent=gene3381;Dbxref=NCBI_GP:AEF84157.1;Name=AEF84157.1;Note=identified by match to protein family HMM PF03480;gbkey=CDS;product=putative trap dicarboxylate transporter%2C dctp subunit;protein_id=AEF84157.1;transl_table=11 CP001843.1 Genbank gene 3732591 3733097 . + . ID=gene3382;Name=TREPR_0593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0593 CP001843.1 Genbank CDS 3732591 3733097 . + 0 ID=cds3233;Parent=gene3382;Dbxref=NCBI_GP:AEF85962.1;Name=AEF85962.1;Note=identified by match to protein family HMM PF04290;gbkey=CDS;product=putative tripartite ATP-independent periplasmic transporter%2C DctQ component;protein_id=AEF85962.1;transl_table=11 CP001843.1 Genbank gene 3733108 3734403 . + . ID=gene3383;Name=TREPR_0592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0592 CP001843.1 Genbank CDS 3733108 3734403 . + 0 ID=cds3234;Parent=gene3383;Dbxref=NCBI_GP:AEF86175.1;Name=AEF86175.1;Note=identified by match to protein family HMM PF06808%3B match to protein family HMM TIGR00786;gbkey=CDS;product=trap dicarboxylate transporter%2C dctm subunit;protein_id=AEF86175.1;transl_table=11 CP001843.1 Genbank gene 3734424 3735491 . + . ID=gene3384;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=TREPR_0591 CP001843.1 Genbank CDS 3734424 3735491 . + 0 ID=cds3235;Parent=gene3384;Dbxref=NCBI_GP:AEF84348.1;Name=AEF84348.1;Note=identified by match to protein family HMM PF01261%3B match to protein family HMM PF03786%3B match to protein family HMM TIGR00695;gbkey=CDS;gene=uxuA;product=mannonate dehydratase;protein_id=AEF84348.1;transl_table=11 CP001843.1 Genbank gene 3735516 3737141 . + . ID=gene3385;Name=TREPR_0590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0590 CP001843.1 Genbank CDS 3735516 3737141 . + 0 ID=cds3236;Parent=gene3385;Dbxref=NCBI_GP:AEF85083.1;Name=AEF85083.1;Note=identified by match to protein family HMM PF08125;gbkey=CDS;product=mannitol-1-phosphate/altronate dehydrogenase;protein_id=AEF85083.1;transl_table=11 CP001843.1 Genbank gene 3737155 3738627 . + . ID=gene3386;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=TREPR_0589 CP001843.1 Genbank CDS 3737155 3738627 . + 0 ID=cds3237;Parent=gene3386;Dbxref=NCBI_GP:AEF84914.1;Name=AEF84914.1;Note=identified by match to protein family HMM PF02614;gbkey=CDS;gene=uxaC;product=glucuronate isomerase;protein_id=AEF84914.1;transl_table=11 CP001843.1 Genbank gene 3738611 3739591 . + . ID=gene3387;Name=TREPR_0588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0588 CP001843.1 Genbank CDS 3738611 3739591 . + 0 ID=cds3238;Parent=gene3387;Dbxref=NCBI_GP:AEF85750.1;Name=AEF85750.1;Note=identified by match to protein family HMM PF01081%3B match to protein family HMM TIGR01182;gbkey=CDS;product=khg/kdpg family aldolase/carbohydrate kinase%2C pfkb family;protein_id=AEF85750.1;transl_table=11 CP001843.1 Genbank gene 3739737 3740759 . + . ID=gene3388;Name=TREPR_0587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0587 CP001843.1 Genbank CDS 3739737 3740759 . + 0 ID=cds3239;Parent=gene3388;Dbxref=NCBI_GP:AEF83886.1;Name=AEF83886.1;Note=identified by match to protein family HMM PF00294;gbkey=CDS;product=khg/kdpg family aldolase/carbohydrate kinase%2C pfkb family;protein_id=AEF83886.1;transl_table=11 CP001843.1 Genbank gene 3740836 3741630 . + . ID=gene3389;Name=TREPR_0586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0586 CP001843.1 Genbank CDS 3740836 3741630 . + 0 ID=cds3240;Parent=gene3389;Dbxref=NCBI_GP:AEF84634.1;Name=AEF84634.1;gbkey=CDS;product=heavy metal transport/detoxification protein;protein_id=AEF84634.1;transl_table=11 CP001843.1 Genbank gene 3741657 3742364 . + . ID=gene3390;Name=TREPR_0585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0585 CP001843.1 Genbank CDS 3741657 3742364 . + 0 ID=cds3241;Parent=gene3390;Dbxref=NCBI_GP:AEF84403.1;Name=AEF84403.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF84403.1;transl_table=11 CP001843.1 Genbank gene 3742384 3744840 . + . ID=gene3391;Name=TREPR_0584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0584 CP001843.1 Genbank CDS 3742384 3744840 . + 0 ID=cds3242;Parent=gene3391;Dbxref=NCBI_GP:AEF86718.1;Name=AEF86718.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525;gbkey=CDS;product=copper-exporting ATPase;protein_id=AEF86718.1;transl_table=11 CP001843.1 Genbank gene 3744866 3745066 . + . ID=gene3392;Name=TREPR_0583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0583 CP001843.1 Genbank CDS 3744866 3745066 . + 0 ID=cds3243;Parent=gene3392;Dbxref=NCBI_GP:AEF83561.1;Name=AEF83561.1;Note=identified by match to protein family HMM PF00403;gbkey=CDS;product=putative heavy metal-binding protein;protein_id=AEF83561.1;transl_table=11 CP001843.1 Genbank gene 3745063 3745791 . + . ID=gene3393;Name=TREPR_0582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0582 CP001843.1 Genbank CDS 3745063 3745791 . + 0 ID=cds3244;Parent=gene3393;Dbxref=NCBI_GP:AEF86533.1;Name=AEF86533.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;product=two component transcriptional regulator%2C winged helix family;protein_id=AEF86533.1;transl_table=11 CP001843.1 Genbank gene 3745788 3747194 . + . ID=gene3394;Name=TREPR_0581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0581 CP001843.1 Genbank CDS 3745788 3747194 . + 0 ID=cds3245;Parent=gene3394;Dbxref=NCBI_GP:AEF85545.1;Name=AEF85545.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;product=periplasmic sensor signal transduction histidine kinase;protein_id=AEF85545.1;transl_table=11 CP001843.1 Genbank gene 3747212 3747877 . - . ID=gene3395;Name=TREPR_0580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0580 CP001843.1 Genbank CDS 3747212 3747877 . - 0 ID=cds3246;Parent=gene3395;Dbxref=NCBI_GP:AEF84897.1;Name=AEF84897.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84897.1;transl_table=11 CP001843.1 Genbank gene 3747897 3749174 . - . ID=gene3396;Name=TREPR_0579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0579 CP001843.1 Genbank CDS 3747897 3749174 . - 0 ID=cds3247;Parent=gene3396;Dbxref=NCBI_GP:AEF84396.1;Name=AEF84396.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84396.1;transl_table=11 CP001843.1 Genbank gene 3749177 3749725 . - . ID=gene3397;Name=TREPR_0578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0578 CP001843.1 Genbank CDS 3749177 3749725 . - 0 ID=cds3248;Parent=gene3397;Dbxref=NCBI_GP:AEF86912.1;Name=AEF86912.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86912.1;transl_table=11 CP001843.1 Genbank gene 3749739 3751307 . - . ID=gene3398;Name=TREPR_0577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0577 CP001843.1 Genbank CDS 3749739 3751307 . - 0 ID=cds3249;Parent=gene3398;Dbxref=NCBI_GP:AEF86294.1;Name=AEF86294.1;Note=identified by match to protein family HMM PF07581;gbkey=CDS;product=GLUG domain protein;protein_id=AEF86294.1;transl_table=11 CP001843.1 Genbank gene 3751484 3751720 . - . ID=gene3399;Name=TREPR_0576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0576 CP001843.1 Genbank CDS 3751484 3751720 . - 0 ID=cds3250;Parent=gene3399;Dbxref=NCBI_GP:AEF85329.1;Name=AEF85329.1;gbkey=CDS;product=fic family protein;protein_id=AEF85329.1;transl_table=11 CP001843.1 Genbank gene 3751806 3752531 . + . ID=gene3400;Name=TREPR_0574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0574 CP001843.1 Genbank CDS 3751806 3752531 . + 0 ID=cds3251;Parent=gene3400;Dbxref=NCBI_GP:AEF84154.1;Name=AEF84154.1;Note=identified by match to protein family HMM PF02592%3B match to protein family HMM TIGR00697;gbkey=CDS;product=putative membrane protein;protein_id=AEF84154.1;transl_table=11 CP001843.1 Genbank gene 3752528 3753235 . - . ID=gene3401;Name=TREPR_0575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0575 CP001843.1 Genbank CDS 3752528 3753235 . - 0 ID=cds3252;Parent=gene3401;Dbxref=NCBI_GP:AEF86372.1;Name=AEF86372.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86372.1;transl_table=11 CP001843.1 Genbank gene 3753212 3754069 . + . ID=gene3402;Name=TREPR_0573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0573 CP001843.1 Genbank CDS 3753212 3754069 . + 0 ID=cds3253;Parent=gene3402;Dbxref=NCBI_GP:AEF86823.1;Name=AEF86823.1;Note=identified by match to protein family HMM PF00899;gbkey=CDS;product=ThiF family protein;protein_id=AEF86823.1;transl_table=11 CP001843.1 Genbank gene 3754062 3754808 . + . ID=gene3403;Name=TREPR_0572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0572 CP001843.1 Genbank CDS 3754062 3754808 . + 0 ID=cds3254;Parent=gene3403;Dbxref=NCBI_GP:AEF84174.1;Name=AEF84174.1;Note=identified by match to protein family HMM PF01171;gbkey=CDS;product=adenine nucleotide alpha hydrolase ATP-binding family protein;protein_id=AEF84174.1;transl_table=11 CP001843.1 Genbank gene 3754840 3755685 . + . ID=gene3404;Name=TREPR_0571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0571 CP001843.1 Genbank CDS 3754840 3755685 . + 0 ID=cds3255;Parent=gene3404;Dbxref=NCBI_GP:AEF84930.1;Name=AEF84930.1;gbkey=CDS;product=cell wall hydrolase/autolysin;protein_id=AEF84930.1;transl_table=11 CP001843.1 Genbank gene 3755719 3756759 . - . ID=gene3405;Name=TREPR_0570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0570 CP001843.1 Genbank CDS 3755719 3756759 . - 0 ID=cds3256;Parent=gene3405;Dbxref=NCBI_GP:AEF86598.1;Name=AEF86598.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=spermidine/putrescine-binding periplasmic protein;protein_id=AEF86598.1;transl_table=11 CP001843.1 Genbank gene 3756829 3757695 . - . ID=gene3406;Name=TREPR_0569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0569 CP001843.1 Genbank CDS 3756829 3757695 . - 0 ID=cds3257;Parent=gene3406;Dbxref=NCBI_GP:AEF83757.1;Name=AEF83757.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=spermidine/putrescine transport system permease protein PotC;protein_id=AEF83757.1;transl_table=11 CP001843.1 Genbank gene 3757692 3758525 . - . ID=gene3407;Name=TREPR_0568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0568 CP001843.1 Genbank CDS 3757692 3758525 . - 0 ID=cds3258;Parent=gene3407;Dbxref=NCBI_GP:AEF84503.1;Name=AEF84503.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=spermidine/putrescine transport system permease protein PotB;protein_id=AEF84503.1;transl_table=11 CP001843.1 Genbank gene 3758573 3759751 . - . ID=gene3408;Name=TREPR_0567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0567 CP001843.1 Genbank CDS 3758573 3759751 . - 0 ID=cds3259;Parent=gene3408;Dbxref=NCBI_GP:AEF85313.1;Name=AEF85313.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF03459%3B match to protein family HMM PF08402%3B match to protein family HMM TIGR01187;gbkey=CDS;product=spermidine/putrescine import ATP-binding protein PotA;protein_id=AEF85313.1;transl_table=11 CP001843.1 Genbank gene 3759958 3761019 . - . ID=gene3409;Name=TREPR_0566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0566 CP001843.1 Genbank CDS 3759958 3761019 . - 0 ID=cds3260;Parent=gene3409;Dbxref=NCBI_GP:AEF86849.1;Name=AEF86849.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00238;gbkey=CDS;product=L-lysine 2%2C3-aminomutase (KAM) (LAM);protein_id=AEF86849.1;transl_table=11 CP001843.1 Genbank gene 3761177 3762130 . - . ID=gene3410;Name=TREPR_0565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0565 CP001843.1 Genbank CDS 3761177 3762130 . - 0 ID=cds3261;Parent=gene3410;Dbxref=NCBI_GP:AEF85972.1;Name=AEF85972.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02311%3B match to protein family HMM PF07883;gbkey=CDS;product=transcriptional regulator%2C AraC family;protein_id=AEF85972.1;transl_table=11 CP001843.1 Genbank gene 3762340 3762726 . + . ID=gene3411;Name=TREPR_0563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0563 CP001843.1 Genbank CDS 3762340 3762726 . + 0 ID=cds3262;Parent=gene3411;Dbxref=NCBI_GP:AEF85086.1;Name=AEF85086.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85086.1;transl_table=11 CP001843.1 Genbank gene 3762728 3763336 . + . ID=gene3412;Name=TREPR_0562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0562 CP001843.1 Genbank CDS 3762728 3763336 . + 0 ID=cds3263;Parent=gene3412;Dbxref=NCBI_GP:AEF84457.1;Name=AEF84457.1;Note=identified by match to protein family HMM PF00132;gbkey=CDS;product=galactoside O-acetyltransferase;protein_id=AEF84457.1;transl_table=11 CP001843.1 Genbank gene 3763474 3764733 . - . ID=gene3413;Name=TREPR_0561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0561 CP001843.1 Genbank CDS 3763474 3764733 . - 0 ID=cds3264;Parent=gene3413;Dbxref=NCBI_GP:AEF87012.1;Name=AEF87012.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01910;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=AEF87012.1;transl_table=11 CP001843.1 Genbank gene 3764770 3765741 . - . ID=gene3414;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=TREPR_0560 CP001843.1 Genbank CDS 3764770 3765741 . - 0 ID=cds3265;Parent=gene3414;Dbxref=NCBI_GP:AEF84248.1;Name=AEF84248.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF05368%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179;gbkey=CDS;gene=galE;product=UDP-glucose 4-epimerase;protein_id=AEF84248.1;transl_table=11 CP001843.1 Genbank gene 3765949 3767010 . + . ID=gene3415;Name=TREPR_0559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0559 CP001843.1 Genbank CDS 3765949 3767010 . + 0 ID=cds3266;Parent=gene3415;Dbxref=NCBI_GP:AEF84170.1;Name=AEF84170.1;Note=identified by match to protein family HMM PF09479%3B match to protein family HMM TIGR02543;gbkey=CDS;product=repeat protein;protein_id=AEF84170.1;transl_table=11 CP001843.1 Genbank gene 3767280 3768047 . - . ID=gene3416;Name=TREPR_0558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0558 CP001843.1 Genbank CDS 3767280 3768047 . - 0 ID=cds3267;Parent=gene3416;Dbxref=NCBI_GP:AEF84887.1;Name=AEF84887.1;Note=identified by match to protein family HMM PF00657;gbkey=CDS;product=lipolytic enzyme%2C GDSL domain protein;protein_id=AEF84887.1;transl_table=11 CP001843.1 Genbank gene 3768338 3768670 . + . ID=gene3417;Name=TREPR_0557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0557 CP001843.1 Genbank CDS 3768338 3768670 . + 0 ID=cds3268;Parent=gene3417;Dbxref=NCBI_GP:AEF85296.1;Name=AEF85296.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;product=DNA-binding protein;protein_id=AEF85296.1;transl_table=11 CP001843.1 Genbank gene 3768778 3770886 . - . ID=gene3418;Name=TREPR_0556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0556 CP001843.1 Genbank CDS 3768778 3770886 . - 0 ID=cds3269;Parent=gene3418;Dbxref=NCBI_GP:AEF86536.1;Name=AEF86536.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ABC transporter%2C ATP-binding protein;protein_id=AEF86536.1;transl_table=11 CP001843.1 Genbank pseudogene 3770893 3772287 . - . ID=gene3419;Name=TREPR_0555;Note=putative lipoprotein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0555;pseudo=true CP001843.1 Genbank gene 3773232 3774950 . + . ID=gene3420;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=TREPR_0553 CP001843.1 Genbank CDS 3773232 3774950 . + 0 ID=cds3270;Parent=gene3420;Dbxref=NCBI_GP:AEF85853.1;Name=AEF85853.1;Note=identified by match to protein family HMM PF00749%3B match to protein family HMM PF03950%3B match to protein family HMM TIGR00440;gbkey=CDS;gene=glnS;product=glutamine--tRNA ligase;protein_id=AEF85853.1;transl_table=11 CP001843.1 Genbank gene 3774960 3775745 . + . ID=gene3421;Name=TREPR_0552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0552 CP001843.1 Genbank CDS 3774960 3775745 . + 0 ID=cds3271;Parent=gene3421;Dbxref=NCBI_GP:AEF86787.1;Name=AEF86787.1;Note=identified by match to protein family HMM PF00756;gbkey=CDS;product=tributyrin esterase;protein_id=AEF86787.1;transl_table=11 CP001843.1 Genbank gene 3775814 3776944 . + . ID=gene3422;Name=TREPR_0551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0551 CP001843.1 Genbank CDS 3775814 3776944 . + 0 ID=cds3272;Parent=gene3422;Dbxref=NCBI_GP:AEF84257.1;Name=AEF84257.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;product=4Fe-4S ferredoxin%2C iron-sulfur binding domain protein;protein_id=AEF84257.1;transl_table=11 CP001843.1 Genbank gene 3776988 3778388 . - . ID=gene3423;Name=TREPR_0550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0550 CP001843.1 Genbank CDS 3776988 3778388 . - 0 ID=cds3273;Parent=gene3423;Dbxref=NCBI_GP:AEF85265.1;Name=AEF85265.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;product=outer membrane efflux protein;protein_id=AEF85265.1;transl_table=11 CP001843.1 Genbank gene 3778435 3779532 . + . ID=gene3424;Name=TREPR_0549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0549 CP001843.1 Genbank CDS 3778435 3779532 . + 0 ID=cds3274;Parent=gene3424;Dbxref=NCBI_GP:AEF85308.1;Name=AEF85308.1;Note=identified by match to protein family HMM TIGR01730;gbkey=CDS;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=AEF85308.1;transl_table=11 CP001843.1 Genbank gene 3779529 3782648 . + . ID=gene3425;Name=TREPR_0547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0547 CP001843.1 Genbank CDS 3779529 3782648 . + 0 ID=cds3275;Parent=gene3425;Dbxref=NCBI_GP:AEF83814.1;Name=AEF83814.1;Note=identified by match to protein family HMM PF00873;gbkey=CDS;product=putative AcrB family membrane transport protein;protein_id=AEF83814.1;transl_table=11 CP001843.1 Genbank gene 3782645 3784615 . - . ID=gene3426;Name=TREPR_0548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0548 CP001843.1 Genbank CDS 3782645 3784615 . - 0 ID=cds3276;Parent=gene3426;Dbxref=NCBI_GP:AEF86841.1;Name=AEF86841.1;Note=identified by match to protein family HMM PF07715;gbkey=CDS;product=TonB-dependent receptor plug domain protein;protein_id=AEF86841.1;transl_table=11 CP001843.1 Genbank gene 3784647 3785495 . - . ID=gene3427;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=TREPR_0546 CP001843.1 Genbank CDS 3784647 3785495 . - 0 ID=cds3277;Parent=gene3427;Dbxref=NCBI_GP:AEF84449.1;Name=AEF84449.1;Note=identified by match to protein family HMM PF02654;gbkey=CDS;gene=cobS;product=cobalamin-5-phosphate synthase;protein_id=AEF84449.1;transl_table=11 CP001843.1 Genbank gene 3785492 3786538 . - . ID=gene3428;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=TREPR_0545 CP001843.1 Genbank CDS 3785492 3786538 . - 0 ID=cds3278;Parent=gene3428;Dbxref=NCBI_GP:AEF83666.1;Name=AEF83666.1;Note=identified by match to protein family HMM PF02277%3B match to protein family HMM TIGR03160;gbkey=CDS;gene=cobT;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=AEF83666.1;transl_table=11 CP001843.1 Genbank gene 3786540 3787355 . - . ID=gene3429;Name=TREPR_0544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0544 CP001843.1 Genbank CDS 3786540 3787355 . - 0 ID=cds3279;Parent=gene3429;Dbxref=NCBI_GP:AEF83587.1;Name=AEF83587.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83587.1;transl_table=11 CP001843.1 Genbank gene 3787352 3787882 . - . ID=gene3430;Name=TREPR_0543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0543 CP001843.1 Genbank CDS 3787352 3787882 . - 0 ID=cds3280;Parent=gene3430;Dbxref=NCBI_GP:AEF86207.1;Name=AEF86207.1;Note=identified by match to protein family HMM PF02283;gbkey=CDS;product=bifunctional adenosylcobalamin biosynthesis protein CobP;protein_id=AEF86207.1;transl_table=11 CP001843.1 Genbank gene 3787896 3789197 . - . ID=gene3431;Name=TREPR_0542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0542 CP001843.1 Genbank CDS 3787896 3789197 . - 0 ID=cds3281;Parent=gene3431;Dbxref=NCBI_GP:AEF85679.1;Name=AEF85679.1;Note=identified by match to protein family HMM PF00148;gbkey=CDS;product=oxidoreductase/nitrogenase%2C component 1;protein_id=AEF85679.1;transl_table=11 CP001843.1 Genbank gene 3789166 3791367 . - . ID=gene3432;Name=TREPR_0541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0541 CP001843.1 Genbank CDS 3789166 3791367 . - 0 ID=cds3282;Parent=gene3432;Dbxref=NCBI_GP:AEF84719.1;Name=AEF84719.1;Note=identified by match to protein family HMM PF00142%3B match to protein family HMM PF00148;gbkey=CDS;product=nitrogen fixation protein NifH/NifE;protein_id=AEF84719.1;transl_table=11 CP001843.1 Genbank gene 3791360 3792169 . - . ID=gene3433;Name=TREPR_0540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0540 CP001843.1 Genbank CDS 3791360 3792169 . - 0 ID=cds3283;Parent=gene3433;Dbxref=NCBI_GP:AEF86810.1;Name=AEF86810.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ferric enterobactin transport ATP-binding protein FepC;protein_id=AEF86810.1;transl_table=11 CP001843.1 Genbank gene 3792179 3793192 . - . ID=gene3434;Name=TREPR_0539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0539 CP001843.1 Genbank CDS 3792179 3793192 . - 0 ID=cds3284;Parent=gene3434;Dbxref=NCBI_GP:AEF86700.1;Name=AEF86700.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;product=HmuU protein;protein_id=AEF86700.1;transl_table=11 CP001843.1 Genbank gene 3793179 3794081 . - . ID=gene3435;Name=TREPR_0538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0538 CP001843.1 Genbank CDS 3793179 3794081 . - 0 ID=cds3285;Parent=gene3435;Dbxref=NCBI_GP:AEF85928.1;Name=AEF85928.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=periplasmic binding protein;protein_id=AEF85928.1;transl_table=11 CP001843.1 Genbank gene 3794074 3796101 . - . ID=gene3436;Name=TREPR_0537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0537 CP001843.1 Genbank CDS 3794074 3796101 . - 0 ID=cds3286;Parent=gene3436;Dbxref=NCBI_GP:AEF85224.1;Name=AEF85224.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;product=putative vitamin B12 transporter BtuB (Cobalamin receptor) (Outermembrane cobalamin translocator);protein_id=AEF85224.1;transl_table=11 CP001843.1 Genbank gene 3796129 3796686 . - . ID=gene3437;Name=TREPR_0536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0536 CP001843.1 Genbank CDS 3796129 3796686 . - 0 ID=cds3287;Parent=gene3437;Dbxref=NCBI_GP:AEF84253.1;Name=AEF84253.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84253.1;transl_table=11 CP001843.1 Genbank gene 3797135 3798589 . - . ID=gene3438;Name=cobQ_1;gbkey=Gene;gene=cobQ_1;gene_biotype=protein_coding;locus_tag=TREPR_0534 CP001843.1 Genbank CDS 3797135 3798589 . - 0 ID=cds3288;Parent=gene3438;Dbxref=NCBI_GP:AEF83724.1;Name=AEF83724.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00313;gbkey=CDS;gene=cobQ_1;product=cobyric acid synthase CobQ;protein_id=AEF83724.1;transl_table=11 CP001843.1 Genbank gene 3798679 3799491 . - . ID=gene3439;Name=TREPR_0533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0533 CP001843.1 Genbank CDS 3798679 3799491 . - 0 ID=cds3289;Parent=gene3439;Dbxref=NCBI_GP:AEF85476.1;Name=AEF85476.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ferric enterobactin transport ATP-binding protein FepC;protein_id=AEF85476.1;transl_table=11 CP001843.1 Genbank gene 3799488 3800570 . - . ID=gene3440;Name=TREPR_0532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0532 CP001843.1 Genbank CDS 3799488 3800570 . - 0 ID=cds3290;Parent=gene3440;Dbxref=NCBI_GP:AEF86459.1;Name=AEF86459.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;product=HmuU protein;protein_id=AEF86459.1;transl_table=11 CP001843.1 Genbank gene 3800567 3801205 . - . ID=gene3441;Name=TREPR_0531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0531 CP001843.1 Genbank CDS 3800567 3801205 . - 0 ID=cds3291;Parent=gene3441;Dbxref=NCBI_GP:AEF84839.1;Name=AEF84839.1;Note=identified by match to protein family HMM PF02570;gbkey=CDS;product=cobalt-precorrin-8X methylmutase;protein_id=AEF84839.1;transl_table=11 CP001843.1 Genbank gene 3801205 3801708 . - . ID=gene3442;Name=TREPR_0530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0530 CP001843.1 Genbank CDS 3801205 3801708 . - 0 ID=cds3292;Parent=gene3442;Dbxref=NCBI_GP:AEF83749.1;Name=AEF83749.1;Note=identified by match to protein family HMM PF02572;gbkey=CDS;product=Cob(I)yrinic acid a%2Cc-diamide adenosyltransferase (Cob(I)alamin adenosyltransferase) (Corrinoid adenosyltransferase);protein_id=AEF83749.1;transl_table=11 CP001843.1 Genbank gene 3801705 3803180 . - . ID=gene3443;Name=cobQ_2;gbkey=Gene;gene=cobQ_2;gene_biotype=protein_coding;locus_tag=TREPR_0529 CP001843.1 Genbank CDS 3801705 3803180 . - 0 ID=cds3293;Parent=gene3443;Dbxref=NCBI_GP:AEF86800.1;Name=AEF86800.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00313;gbkey=CDS;gene=cobQ_2;product=cobyric acid synthase CobQ;protein_id=AEF86800.1;transl_table=11 CP001843.1 Genbank gene 3803164 3804219 . - . ID=gene3444;Name=TREPR_0528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0528 CP001843.1 Genbank CDS 3803164 3804219 . - 0 ID=cds3294;Parent=gene3444;Dbxref=NCBI_GP:AEF84311.1;Name=AEF84311.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01140;gbkey=CDS;product=threonine-phosphate decarboxylase;protein_id=AEF84311.1;transl_table=11 CP001843.1 Genbank gene 3804180 3805169 . - . ID=gene3445;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=TREPR_0527 CP001843.1 Genbank CDS 3804180 3805169 . - 0 ID=cds3295;Parent=gene3445;Dbxref=NCBI_GP:AEF83524.1;Name=AEF83524.1;Note=identified by match to protein family HMM PF03186%3B match to protein family HMM TIGR00380;gbkey=CDS;gene=cobD;product=cobalamin biosynthesis protein CobD;protein_id=AEF83524.1;transl_table=11 CP001843.1 Genbank gene 3805166 3806659 . - . ID=gene3446;Name=cobB_2;gbkey=Gene;gene=cobB_2;gene_biotype=protein_coding;locus_tag=TREPR_0526 CP001843.1 Genbank CDS 3805166 3806659 . - 0 ID=cds3296;Parent=gene3446;Dbxref=NCBI_GP:AEF84519.1;Name=AEF84519.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00379;gbkey=CDS;gene=cobB_2;product=cobyrinic Acid a%2Cc-diamide synthase;protein_id=AEF84519.1;transl_table=11 CP001843.1 Genbank gene 3806656 3807915 . - . ID=gene3447;Name=TREPR_0525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0525 CP001843.1 Genbank CDS 3806656 3807915 . - 0 ID=cds3297;Parent=gene3447;Dbxref=NCBI_GP:AEF86059.1;Name=AEF86059.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM PF03602%3B match to protein family HMM TIGR02467%3B match to protein family HMM TIGR02469;gbkey=CDS;product=precorrin-6y C5%2C15-methyltransferase (decarboxylating);protein_id=AEF86059.1;transl_table=11 CP001843.1 Genbank pseudogene 3807912 3808658 . - . ID=gene3448;Name=TREPR_0524;Note=precorrin-6x reductase CbiJ/CobK%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF02571;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0524;pseudo=true CP001843.1 Genbank gene 3808651 3809382 . - . ID=gene3449;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=TREPR_0523 CP001843.1 Genbank CDS 3808651 3809382 . - 0 ID=cds3298;Parent=gene3449;Dbxref=NCBI_GP:AEF85143.1;Name=AEF85143.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01466;gbkey=CDS;gene=cobJ;product=precorrin-3B C(17)-methyltransferase;protein_id=AEF85143.1;transl_table=11 CP001843.1 Genbank gene 3809375 3810166 . - . ID=gene3450;Name=TREPR_0522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0522 CP001843.1 Genbank CDS 3809375 3810166 . - 0 ID=cds3299;Parent=gene3450;Dbxref=NCBI_GP:AEF85495.1;Name=AEF85495.1;Note=identified by match to protein family HMM PF01890;gbkey=CDS;product=CbiG;protein_id=AEF85495.1;transl_table=11 CP001843.1 Genbank gene 3810163 3810915 . - . ID=gene3451;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=TREPR_0521 CP001843.1 Genbank CDS 3810163 3810915 . - 0 ID=cds3300;Parent=gene3451;Dbxref=NCBI_GP:AEF86770.1;Name=AEF86770.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01465;gbkey=CDS;gene=cobM;product=precorrin-4 C(11)-methyltransferase;protein_id=AEF86770.1;transl_table=11 CP001843.1 Genbank gene 3810912 3812117 . - . ID=gene3452;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=TREPR_0520 CP001843.1 Genbank CDS 3810912 3812117 . - 0 ID=cds3301;Parent=gene3452;Dbxref=NCBI_GP:AEF84017.1;Name=AEF84017.1;Note=identified by match to protein family HMM PF01888%3B match to protein family HMM TIGR00312;gbkey=CDS;gene=cbiD;product=cobalamin biosynthesis protein CbiD;protein_id=AEF84017.1;transl_table=11 CP001843.1 Genbank gene 3812121 3812810 . - . ID=gene3453;Name=TREPR_0519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0519 CP001843.1 Genbank CDS 3812121 3812810 . - 0 ID=cds3302;Parent=gene3453;Dbxref=NCBI_GP:AEF83799.1;Name=AEF83799.1;Note=identified by match to protein family HMM TIGR01352;gbkey=CDS;product=putative TonB-dependent receptor;protein_id=AEF83799.1;transl_table=11 CP001843.1 Genbank gene 3812807 3814774 . - . ID=gene3454;Name=TREPR_0518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0518 CP001843.1 Genbank CDS 3812807 3814774 . - 0 ID=cds3303;Parent=gene3454;Dbxref=NCBI_GP:AEF84757.1;Name=AEF84757.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;product=putative outer membrane protein;protein_id=AEF84757.1;transl_table=11 CP001843.1 Genbank gene 3815334 3816242 . + . ID=gene3455;Name=TREPR_0516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0516 CP001843.1 Genbank CDS 3815334 3816242 . + 0 ID=cds3304;Parent=gene3455;Dbxref=NCBI_GP:AEF86213.1;Name=AEF86213.1;Note=identified by match to protein family HMM PF01903%3B match to protein family HMM PF06180;gbkey=CDS;product=sirohydrochlorin cobaltochelatase;protein_id=AEF86213.1;transl_table=11 CP001843.1 Genbank gene 3816239 3817198 . + . ID=gene3456;Name=TREPR_0515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0515 CP001843.1 Genbank CDS 3816239 3817198 . + 0 ID=cds3305;Parent=gene3456;Dbxref=NCBI_GP:AEF85422.1;Name=AEF85422.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;product=periplasmic binding protein;protein_id=AEF85422.1;transl_table=11 CP001843.1 Genbank gene 3817849 3818976 . + . ID=gene3457;Name=TREPR_0514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0514 CP001843.1 Genbank CDS 3817849 3818976 . + 0 ID=cds3306;Parent=gene3457;Dbxref=NCBI_GP:AEF84109.1;Name=AEF84109.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84109.1;transl_table=11 CP001843.1 Genbank gene 3819053 3819937 . - . ID=gene3458;Name=TREPR_0513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0513 CP001843.1 Genbank CDS 3819053 3819937 . - 0 ID=cds3307;Parent=gene3458;Dbxref=NCBI_GP:AEF85412.1;Name=AEF85412.1;Note=identified by match to protein family HMM PF02146;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=AEF85412.1;transl_table=11 CP001843.1 Genbank gene 3819927 3820472 . - . ID=gene3459;Name=TREPR_0512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0512 CP001843.1 Genbank CDS 3819927 3820472 . - 0 ID=cds3308;Parent=gene3459;Dbxref=NCBI_GP:AEF85213.1;Name=AEF85213.1;Note=identified by match to protein family HMM PF02677;gbkey=CDS;product=uncharacterized conserved protein;protein_id=AEF85213.1;transl_table=11 CP001843.1 Genbank gene 3820568 3821197 . - . ID=gene3460;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=TREPR_0511 CP001843.1 Genbank CDS 3820568 3821197 . - 0 ID=cds3309;Parent=gene3460;Dbxref=NCBI_GP:AEF83549.1;Name=AEF83549.1;Note=identified by match to protein family HMM TIGR02491;gbkey=CDS;gene=nrdG;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=AEF83549.1;transl_table=11 CP001843.1 Genbank gene 3821172 3823499 . - . ID=gene3461;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=TREPR_0510 CP001843.1 Genbank CDS 3821172 3823499 . - 0 ID=cds3310;Parent=gene3461;Dbxref=NCBI_GP:AEF86260.1;Name=AEF86260.1;Note=identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR02487;gbkey=CDS;gene=nrdD;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=AEF86260.1;transl_table=11 CP001843.1 Genbank gene 3823691 3824722 . + . ID=gene3462;Name=TREPR_0509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0509 CP001843.1 Genbank CDS 3823691 3824722 . + 0 ID=cds3311;Parent=gene3462;Dbxref=NCBI_GP:AEF86465.1;Name=AEF86465.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86465.1;transl_table=11 CP001843.1 Genbank gene 3824729 3826816 . + . ID=gene3463;Name=TREPR_0508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0508 CP001843.1 Genbank CDS 3824729 3826816 . + 0 ID=cds3312;Parent=gene3463;Dbxref=NCBI_GP:AEF85724.1;Name=AEF85724.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85724.1;transl_table=11 CP001843.1 Genbank gene 3826953 3827028 . - . ID=gene3464;Name=TREPR_3905;gbkey=Gene;gene_biotype=tRNA;locus_tag=TREPR_3905 CP001843.1 Genbank tRNA 3826953 3827028 . - . ID=rna56;Parent=gene3464;gbkey=tRNA;product=tRNA-Thr CP001843.1 Genbank exon 3826953 3827028 . - . ID=id62;Parent=rna56;gbkey=tRNA;product=tRNA-Thr CP001843.1 Genbank gene 3827190 3827345 . + . ID=gene3465;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=TREPR_0506 CP001843.1 Genbank CDS 3827190 3827345 . + 0 ID=cds3313;Parent=gene3465;Dbxref=NCBI_GP:AEF83962.1;Name=AEF83962.1;Note=identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030;gbkey=CDS;gene=rpmH;product=ribosomal protein L34;protein_id=AEF83962.1;transl_table=11 CP001843.1 Genbank gene 3827369 3827773 . + . ID=gene3466;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=TREPR_0505 CP001843.1 Genbank CDS 3827369 3827773 . + 0 ID=cds3314;Parent=gene3466;Dbxref=NCBI_GP:AEF86763.1;Name=AEF86763.1;Note=identified by match to protein family HMM PF00825%3B match to protein family HMM TIGR00188;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=AEF86763.1;transl_table=11 CP001843.1 Genbank gene 3827773 3827991 . + . ID=gene3467;Name=TREPR_0504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0504 CP001843.1 Genbank CDS 3827773 3827991 . + 0 ID=cds3315;Parent=gene3467;Dbxref=NCBI_GP:AEF84728.1;Name=AEF84728.1;Note=identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84728.1;transl_table=11 CP001843.1 Genbank gene 3828031 3829833 . + . ID=gene3468;Name=TREPR_0503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0503 CP001843.1 Genbank CDS 3828031 3829833 . + 0 ID=cds3316;Parent=gene3468;Dbxref=NCBI_GP:AEF87003.1;Name=AEF87003.1;Note=identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592%3B match to protein family HMM TIGR03593;gbkey=CDS;product=inner membrane protein OxaA;protein_id=AEF87003.1;transl_table=11 CP001843.1 Genbank gene 3829894 3830634 . + . ID=gene3469;Name=TREPR_0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0502 CP001843.1 Genbank CDS 3829894 3830634 . + 0 ID=cds3317;Parent=gene3469;Dbxref=NCBI_GP:AEF83857.1;Name=AEF83857.1;Note=identified by match to protein family HMM PF01424;gbkey=CDS;product=spoiiij-associated protein;protein_id=AEF83857.1;transl_table=11 CP001843.1 Genbank gene 3830809 3832380 . + . ID=gene3470;Name=TREPR_0501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0501 CP001843.1 Genbank CDS 3830809 3832380 . + 0 ID=cds3318;Parent=gene3470;Dbxref=NCBI_GP:AEF84696.1;Name=AEF84696.1;gbkey=CDS;product=ATPase;protein_id=AEF84696.1;transl_table=11 CP001843.1 Genbank gene 3832925 3833911 . + . ID=gene3471;Name=TREPR_0499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0499 CP001843.1 Genbank CDS 3832925 3833911 . + 0 ID=cds3319;Parent=gene3471;Dbxref=NCBI_GP:AEF86613.1;Name=AEF86613.1;gbkey=CDS;product=methyltransferase;protein_id=AEF86613.1;transl_table=11 CP001843.1 Genbank gene 3833951 3835174 . + . ID=gene3472;Name=TREPR_0498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0498 CP001843.1 Genbank CDS 3833951 3835174 . + 0 ID=cds3320;Parent=gene3472;Dbxref=NCBI_GP:AEF85080.1;Name=AEF85080.1;Note=identified by match to protein family HMM PF01170;gbkey=CDS;product=N6-adenine-specific DNA methylase;protein_id=AEF85080.1;transl_table=11 CP001843.1 Genbank gene 3835197 3835793 . + . ID=gene3473;Name=TREPR_0497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0497 CP001843.1 Genbank CDS 3835197 3835793 . + 0 ID=cds3321;Parent=gene3473;Dbxref=NCBI_GP:AEF85893.1;Name=AEF85893.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;product=transcriptional regulator%2C TetR family;protein_id=AEF85893.1;transl_table=11 CP001843.1 Genbank gene 3835964 3836737 . + . ID=gene3474;Name=TREPR_0496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0496 CP001843.1 Genbank CDS 3835964 3836737 . + 0 ID=cds3322;Parent=gene3474;Dbxref=NCBI_GP:AEF85493.1;Name=AEF85493.1;Note=identified by match to protein family HMM PF07238;gbkey=CDS;product=type IV pilus assembly protein PilZ;protein_id=AEF85493.1;transl_table=11 CP001843.1 Genbank gene 3836808 3838976 . - . ID=gene3475;Name=TREPR_0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0495 CP001843.1 Genbank CDS 3836808 3838976 . - 0 ID=cds3323;Parent=gene3475;Dbxref=NCBI_GP:AEF84303.1;Name=AEF84303.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=AEF84303.1;transl_table=11 CP001843.1 Genbank gene 3839225 3841393 . - . ID=gene3476;Name=TREPR_0494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0494 CP001843.1 Genbank CDS 3839225 3841393 . - 0 ID=cds3324;Parent=gene3476;Dbxref=NCBI_GP:AEF84750.1;Name=AEF84750.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=AEF84750.1;transl_table=11 CP001843.1 Genbank gene 3841427 3843610 . - . ID=gene3477;Name=TREPR_0493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0493 CP001843.1 Genbank CDS 3841427 3843610 . - 0 ID=cds3325;Parent=gene3477;Dbxref=NCBI_GP:AEF84204.1;Name=AEF84204.1;Note=identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=AEF84204.1;transl_table=11 CP001843.1 Genbank gene 3843792 3844985 . + . ID=gene3478;Name=TREPR_0492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0492 CP001843.1 Genbank CDS 3843792 3844985 . + 0 ID=cds3326;Parent=gene3478;Dbxref=NCBI_GP:AEF86921.1;Name=AEF86921.1;Note=identified by match to protein family HMM PF01594;gbkey=CDS;product=integral inner membrane protein;protein_id=AEF86921.1;transl_table=11 CP001843.1 Genbank gene 3845071 3846159 . - . ID=gene3479;Name=TREPR_0491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0491 CP001843.1 Genbank CDS 3845071 3846159 . - 0 ID=cds3327;Parent=gene3479;Dbxref=NCBI_GP:AEF84159.1;Name=AEF84159.1;Note=identified by match to protein family HMM PF01300%3B match to protein family HMM PF03481%3B match to protein family HMM TIGR00057;gbkey=CDS;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=AEF84159.1;transl_table=11 CP001843.1 Genbank gene 3846170 3847243 . - . ID=gene3480;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=TREPR_0490 CP001843.1 Genbank CDS 3846170 3847243 . - 0 ID=cds3328;Parent=gene3480;Dbxref=NCBI_GP:AEF86669.1;Name=AEF86669.1;Note=identified by match to protein family HMM PF01544%3B match to protein family HMM TIGR00383;gbkey=CDS;gene=corA;product=magnesium and cobalt transport protein CorA;protein_id=AEF86669.1;transl_table=11 CP001843.1 Genbank gene 3847339 3847791 . + . ID=gene3481;Name=TREPR_0489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0489 CP001843.1 Genbank CDS 3847339 3847791 . + 0 ID=cds3329;Parent=gene3481;Dbxref=NCBI_GP:AEF86116.1;Name=AEF86116.1;Note=identified by match to protein family HMM PF00359;gbkey=CDS;product=PTS system%2C IIA component;protein_id=AEF86116.1;transl_table=11 CP001843.1 Genbank gene 3847892 3849109 . - . ID=gene3482;Name=TREPR_0488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0488 CP001843.1 Genbank CDS 3847892 3849109 . - 0 ID=cds3330;Parent=gene3482;Dbxref=NCBI_GP:AEF85118.1;Name=AEF85118.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85118.1;transl_table=11 CP001843.1 Genbank gene 3849138 3849962 . - . ID=gene3483;Name=TREPR_0487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0487 CP001843.1 Genbank CDS 3849138 3849962 . - 0 ID=cds3331;Parent=gene3483;Dbxref=NCBI_GP:AEF84569.1;Name=AEF84569.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84569.1;transl_table=11 CP001843.1 Genbank gene 3850095 3851981 . + . ID=gene3484;Name=TREPR_0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0485 CP001843.1 Genbank CDS 3850095 3851981 . + 0 ID=cds3332;Parent=gene3484;Dbxref=NCBI_GP:AEF86563.1;Name=AEF86563.1;gbkey=CDS;product=cytoplasm protein;protein_id=AEF86563.1;transl_table=11 CP001843.1 Genbank gene 3851945 3852673 . - . ID=gene3485;Name=TREPR_0486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0486 CP001843.1 Genbank CDS 3851945 3852673 . - 0 ID=cds3333;Parent=gene3485;Dbxref=NCBI_GP:AEF83581.1;Name=AEF83581.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;product=transglycosylase SLT domain protein;protein_id=AEF83581.1;transl_table=11 CP001843.1 Genbank gene 3852824 3853507 . + . ID=gene3486;Name=TREPR_0484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0484 CP001843.1 Genbank CDS 3852824 3853507 . + 0 ID=cds3334;Parent=gene3486;Dbxref=NCBI_GP:AEF85568.1;Name=AEF85568.1;Note=identified by match to protein family HMM PF01300;gbkey=CDS;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=AEF85568.1;transl_table=11 CP001843.1 Genbank gene 3853525 3855282 . - . ID=gene3487;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=TREPR_0483 CP001843.1 Genbank CDS 3853525 3855282 . - 0 ID=cds3335;Parent=gene3487;Dbxref=NCBI_GP:AEF85358.1;Name=AEF85358.1;Note=identified by match to protein family HMM PF03484%3B match to protein family HMM TIGR00471;gbkey=CDS;gene=pheT;product=phenylalanyl-tRNA synthetase%2C beta subunit;protein_id=AEF85358.1;transl_table=11 CP001843.1 Genbank gene 3855376 3855495 . + . ID=gene3488;Name=TREPR_0482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0482 CP001843.1 Genbank CDS 3855376 3855495 . + 0 ID=cds3336;Parent=gene3488;Dbxref=NCBI_GP:AEF84805.1;Name=AEF84805.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84805.1;transl_table=11 CP001843.1 Genbank gene 3855803 3857287 . + . ID=gene3489;Name=TREPR_0480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0480 CP001843.1 Genbank CDS 3855803 3857287 . + 0 ID=cds3337;Parent=gene3489;Dbxref=NCBI_GP:AEF84734.1;Name=AEF84734.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;product=extracellular solute-binding protein%2C family 5;protein_id=AEF84734.1;transl_table=11 CP001843.1 Genbank gene 3857304 3858221 . + . ID=gene3490;Name=TREPR_0479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0479 CP001843.1 Genbank CDS 3857304 3858221 . + 0 ID=cds3338;Parent=gene3490;Dbxref=NCBI_GP:AEF85260.1;Name=AEF85260.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF85260.1;transl_table=11 CP001843.1 Genbank gene 3858223 3859062 . + . ID=gene3491;Name=TREPR_0478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0478 CP001843.1 Genbank CDS 3858223 3859062 . + 0 ID=cds3339;Parent=gene3491;Dbxref=NCBI_GP:AEF84278.1;Name=AEF84278.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=oligopeptide transport system permease protein AppC;protein_id=AEF84278.1;transl_table=11 CP001843.1 Genbank gene 3859074 3860072 . + . ID=gene3492;Name=TREPR_0477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0477 CP001843.1 Genbank CDS 3859074 3860072 . + 0 ID=cds3340;Parent=gene3492;Dbxref=NCBI_GP:AEF86642.1;Name=AEF86642.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;product=dipeptide transport ATP-binding protein DppD;protein_id=AEF86642.1;transl_table=11 CP001843.1 Genbank gene 3860069 3860899 . + . ID=gene3493;Name=TREPR_0476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0476 CP001843.1 Genbank CDS 3860069 3860899 . + 0 ID=cds3341;Parent=gene3493;Dbxref=NCBI_GP:AEF85868.1;Name=AEF85868.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=oligopeptide transport ATP-binding protein AppF;protein_id=AEF85868.1;transl_table=11 CP001843.1 Genbank gene 3860892 3861875 . + . ID=gene3494;Name=TREPR_0475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0475 CP001843.1 Genbank CDS 3860892 3861875 . + 0 ID=cds3342;Parent=gene3494;Dbxref=NCBI_GP:AEF84638.1;Name=AEF84638.1;gbkey=CDS;product=putative uroporphyrinogen decarboxylase;protein_id=AEF84638.1;transl_table=11 CP001843.1 Genbank gene 3861899 3862948 . + . ID=gene3495;Name=TREPR_0474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0474 CP001843.1 Genbank CDS 3861899 3862948 . + 0 ID=cds3343;Parent=gene3495;Dbxref=NCBI_GP:AEF83881.1;Name=AEF83881.1;Note=identified by match to protein family HMM PF03417;gbkey=CDS;product=putative acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase subfamily;protein_id=AEF83881.1;transl_table=11 CP001843.1 Genbank gene 3862966 3864156 . + . ID=gene3496;Name=TREPR_0473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0473 CP001843.1 Genbank CDS 3862966 3864156 . + 0 ID=cds3344;Parent=gene3496;Dbxref=NCBI_GP:AEF85232.1;Name=AEF85232.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321;gbkey=CDS;product=putative Xaa-Pro aminopeptidase;protein_id=AEF85232.1;transl_table=11 CP001843.1 Genbank gene 3864168 3867005 . + . ID=gene3497;Name=TREPR_0472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0472 CP001843.1 Genbank CDS 3864168 3867005 . + 0 ID=cds3345;Parent=gene3497;Dbxref=NCBI_GP:AEF84016.1;Name=AEF84016.1;Note=identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM TIGR02166;gbkey=CDS;product=anaerobic dimethylsulfoxide reductase%2C A subunit;protein_id=AEF84016.1;transl_table=11 CP001843.1 Genbank gene 3867157 3867873 . - . ID=gene3498;Name=TREPR_0471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0471 CP001843.1 Genbank CDS 3867157 3867873 . - 0 ID=cds3346;Parent=gene3498;Dbxref=NCBI_GP:AEF84486.1;Name=AEF84486.1;Note=identified by match to protein family HMM PF01182;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84486.1;transl_table=11 CP001843.1 Genbank gene 3867885 3869324 . - . ID=gene3499;Name=TREPR_0470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0470 CP001843.1 Genbank CDS 3867885 3869324 . - 0 ID=cds3347;Parent=gene3499;Dbxref=NCBI_GP:AEF83720.1;Name=AEF83720.1;Note=identified by match to protein family HMM PF00232;gbkey=CDS;product=beta-glucosidase (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) (Amygdalase);protein_id=AEF83720.1;transl_table=11 CP001843.1 Genbank gene 3869350 3870189 . - . ID=gene3500;Name=TREPR_0469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0469 CP001843.1 Genbank CDS 3869350 3870189 . - 0 ID=cds3348;Parent=gene3500;Dbxref=NCBI_GP:AEF85864.1;Name=AEF85864.1;gbkey=CDS;product=protein-tyrosine phosphatase;protein_id=AEF85864.1;transl_table=11 CP001843.1 Genbank gene 3870191 3871429 . - . ID=gene3501;Name=TREPR_0468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0468 CP001843.1 Genbank CDS 3870191 3871429 . - 0 ID=cds3349;Parent=gene3501;Dbxref=NCBI_GP:AEF85529.1;Name=AEF85529.1;Note=identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410;gbkey=CDS;product=PTS system%2C IIc component;protein_id=AEF85529.1;transl_table=11 CP001843.1 Genbank gene 3871453 3871749 . - . ID=gene3502;Name=TREPR_0467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0467 CP001843.1 Genbank CDS 3871453 3871749 . - 0 ID=cds3350;Parent=gene3502;Dbxref=NCBI_GP:AEF84993.1;Name=AEF84993.1;Note=identified by match to protein family HMM PF02302;gbkey=CDS;product=lichenan-specific phosphotransferase enzyme iib component (pts system lichenan-specific eiib component) (eiib-lic);protein_id=AEF84993.1;transl_table=11 CP001843.1 Genbank gene 3871746 3872075 . - . ID=gene3503;Name=TREPR_0466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0466 CP001843.1 Genbank CDS 3871746 3872075 . - 0 ID=cds3351;Parent=gene3503;Dbxref=NCBI_GP:AEF83994.1;Name=AEF83994.1;Note=identified by match to protein family HMM PF02255;gbkey=CDS;product=lichenan-specific phosphotransferase enzyme iia component;protein_id=AEF83994.1;transl_table=11 CP001843.1 Genbank gene 3872251 3875004 . + . ID=gene3504;Name=TREPR_0465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0465 CP001843.1 Genbank CDS 3872251 3875004 . + 0 ID=cds3352;Parent=gene3504;Dbxref=NCBI_GP:AEF86930.1;Name=AEF86930.1;Note=identified by match to protein family HMM PF00158%3B match to protein family HMM PF00874%3B match to protein family HMM PF07728;gbkey=CDS;product=sigma-54 factor interaction domain protein;protein_id=AEF86930.1;transl_table=11 CP001843.1 Genbank gene 3875067 3875333 . + . ID=gene3505;Name=TREPR_0464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0464 CP001843.1 Genbank CDS 3875067 3875333 . + 0 ID=cds3353;Parent=gene3505;Dbxref=NCBI_GP:AEF86160.1;Name=AEF86160.1;Note=identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003;gbkey=CDS;product=phosphocarrier protein HPr;protein_id=AEF86160.1;transl_table=11 CP001843.1 Genbank gene 3875335 3876948 . + . ID=gene3506;Name=ptsP_4;gbkey=Gene;gene=ptsP_4;gene_biotype=protein_coding;locus_tag=TREPR_0463 CP001843.1 Genbank CDS 3875335 3876948 . + 0 ID=cds3354;Parent=gene3506;Dbxref=NCBI_GP:AEF83726.1;Name=AEF83726.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417;gbkey=CDS;gene=ptsP_4;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=AEF83726.1;transl_table=11 CP001843.1 Genbank gene 3877077 3877883 . - . ID=gene3507;Name=TREPR_0462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0462 CP001843.1 Genbank CDS 3877077 3877883 . - 0 ID=cds3355;Parent=gene3507;Dbxref=NCBI_GP:AEF84409.1;Name=AEF84409.1;Note=identified by match to protein family HMM PF00657;gbkey=CDS;product=lipolytic enzyme%2C GDSL domain protein;protein_id=AEF84409.1;transl_table=11 CP001843.1 Genbank gene 3878007 3879362 . - . ID=gene3508;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=TREPR_0461 CP001843.1 Genbank CDS 3878007 3879362 . - 0 ID=cds3356;Parent=gene3508;Dbxref=NCBI_GP:AEF85856.1;Name=AEF85856.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR02035;gbkey=CDS;gene=dsdA;product=D-serine ammonia-lyase;protein_id=AEF85856.1;transl_table=11 CP001843.1 Genbank gene 3879405 3881126 . - . ID=gene3509;Name=TREPR_0460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0460 CP001843.1 Genbank CDS 3879405 3881126 . - 0 ID=cds3357;Parent=gene3509;Dbxref=NCBI_GP:AEF86584.1;Name=AEF86584.1;Note=identified by match to protein family HMM PF01409%3B match to protein family HMM TIGR00468;gbkey=CDS;product=phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) (PheRS);protein_id=AEF86584.1;transl_table=11 CP001843.1 Genbank gene 3881265 3881951 . - . ID=gene3510;Name=TREPR_0459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0459 CP001843.1 Genbank CDS 3881265 3881951 . - 0 ID=cds3358;Parent=gene3510;Dbxref=NCBI_GP:AEF83619.1;Name=AEF83619.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83619.1;transl_table=11 CP001843.1 Genbank gene 3882029 3882406 . + . ID=gene3511;Name=TREPR_0458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0458 CP001843.1 Genbank CDS 3882029 3882406 . + 0 ID=cds3359;Parent=gene3511;Dbxref=NCBI_GP:AEF84600.1;Name=AEF84600.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84600.1;transl_table=11 CP001843.1 Genbank gene 3882409 3882678 . + . ID=gene3512;Name=TREPR_0457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0457 CP001843.1 Genbank CDS 3882409 3882678 . + 0 ID=cds3360;Parent=gene3512;Dbxref=NCBI_GP:AEF86279.1;Name=AEF86279.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86279.1;transl_table=11 CP001843.1 Genbank gene 3882792 3884171 . - . ID=gene3513;Name=TREPR_0456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0456 CP001843.1 Genbank CDS 3882792 3884171 . - 0 ID=cds3361;Parent=gene3513;Dbxref=NCBI_GP:AEF86864.1;Name=AEF86864.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01415;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86864.1;transl_table=11 CP001843.1 Genbank gene 3884256 3884885 . - . ID=gene3514;Name=TREPR_0455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0455 CP001843.1 Genbank CDS 3884256 3884885 . - 0 ID=cds3362;Parent=gene3514;Dbxref=NCBI_GP:AEF84332.1;Name=AEF84332.1;Note=identified by match to protein family HMM PF01694;gbkey=CDS;product=rhomboid family protein;protein_id=AEF84332.1;transl_table=11 CP001843.1 Genbank gene 3884898 3885956 . - . ID=gene3515;Name=TREPR_0454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0454 CP001843.1 Genbank CDS 3884898 3885956 . - 0 ID=cds3363;Parent=gene3515;Dbxref=NCBI_GP:AEF84853.1;Name=AEF84853.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=diguanylate cyclase (GGDEF) domain protein;protein_id=AEF84853.1;transl_table=11 CP001843.1 Genbank gene 3886021 3886998 . - . ID=gene3516;Name=TREPR_0453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0453 CP001843.1 Genbank CDS 3886021 3886998 . - 0 ID=cds3364;Parent=gene3516;Dbxref=NCBI_GP:AEF85019.1;Name=AEF85019.1;Note=identified by match to protein family HMM PF01207%3B match to protein family HMM TIGR00737;gbkey=CDS;product=tRNA-dihydrouridine synthase;protein_id=AEF85019.1;transl_table=11 CP001843.1 Genbank gene 3886999 3887835 . - . ID=gene3517;Name=TREPR_0452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0452 CP001843.1 Genbank CDS 3886999 3887835 . - 0 ID=cds3365;Parent=gene3517;Dbxref=NCBI_GP:AEF84047.1;Name=AEF84047.1;Note=identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010;gbkey=CDS;product=hydrolase%2C TatD family;protein_id=AEF84047.1;transl_table=11 CP001843.1 Genbank gene 3888013 3888687 . + . ID=gene3518;Name=TREPR_0451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0451 CP001843.1 Genbank CDS 3888013 3888687 . + 0 ID=cds3366;Parent=gene3518;Dbxref=NCBI_GP:AEF86421.1;Name=AEF86421.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;product=transcriptional regulatory protein DegU;protein_id=AEF86421.1;transl_table=11 CP001843.1 Genbank gene 3888700 3889770 . - . ID=gene3519;Name=TREPR_0450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0450 CP001843.1 Genbank CDS 3888700 3889770 . - 0 ID=cds3367;Parent=gene3519;Dbxref=NCBI_GP:AEF84968.1;Name=AEF84968.1;Note=identified by match to protein family HMM PF00160%3B match to protein family HMM PF00254;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=AEF84968.1;transl_table=11 CP001843.1 Genbank gene 3889824 3890435 . - . ID=gene3520;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=TREPR_0449 CP001843.1 Genbank CDS 3889824 3890435 . - 0 ID=cds3368;Parent=gene3520;Dbxref=NCBI_GP:AEF84036.1;Name=AEF84036.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=AEF84036.1;transl_table=11 CP001843.1 Genbank gene 3890432 3890797 . - . ID=gene3521;Name=TREPR_0448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0448 CP001843.1 Genbank CDS 3890432 3890797 . - 0 ID=cds3369;Parent=gene3521;Dbxref=NCBI_GP:AEF86986.1;Name=AEF86986.1;Note=identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86986.1;transl_table=11 CP001843.1 Genbank gene 3890787 3892751 . - . ID=gene3522;Name=TREPR_0447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0447 CP001843.1 Genbank CDS 3890787 3892751 . - 0 ID=cds3370;Parent=gene3522;Dbxref=NCBI_GP:AEF86972.1;Name=AEF86972.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR02397;gbkey=CDS;product=DNA polymerase III%2C gamma and tau subunit;protein_id=AEF86972.1;transl_table=11 CP001843.1 Genbank gene 3893292 3893392 . - . ID=gene3523;Name=srpB;gbkey=Gene;gene=srpB;gene_biotype=SRP_RNA;locus_tag=TREPR_3904 CP001843.1 Genbank SRP_RNA 3893292 3893392 . - . ID=rna57;Parent=gene3523;gbkey=ncRNA;gene=srpB;product=Bacterial signal recognition particle RNA CP001843.1 Genbank exon 3893292 3893392 . - . ID=id63;Parent=rna57;gbkey=ncRNA;gene=srpB;product=Bacterial signal recognition particle RNA CP001843.1 Genbank gene 3893537 3895147 . - . ID=gene3524;Name=TREPR_0446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0446 CP001843.1 Genbank CDS 3893537 3895147 . - 0 ID=cds3371;Parent=gene3524;Dbxref=NCBI_GP:AEF86053.1;Name=AEF86053.1;Note=identified by match to protein family HMM PF00135;gbkey=CDS;product=fatty acyl-CoA hydrolase %2C medium chain (Thioesterase B);protein_id=AEF86053.1;transl_table=11 CP001843.1 Genbank gene 3895282 3896496 . - . ID=gene3525;Name=TREPR_0444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0444 CP001843.1 Genbank CDS 3895282 3896496 . - 0 ID=cds3372;Parent=gene3525;Dbxref=NCBI_GP:AEF83623.1;Name=AEF83623.1;Note=identified by match to protein family HMM PF01094;gbkey=CDS;product=receptor family ligand-binding protein;protein_id=AEF83623.1;transl_table=11 CP001843.1 Genbank gene 3896493 3897401 . - . ID=gene3526;Name=TREPR_0443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0443 CP001843.1 Genbank CDS 3896493 3897401 . - 0 ID=cds3373;Parent=gene3526;Dbxref=NCBI_GP:AEF84106.1;Name=AEF84106.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=putative inner-membrane translocator;protein_id=AEF84106.1;transl_table=11 CP001843.1 Genbank gene 3897410 3898339 . - . ID=gene3527;Name=TREPR_0442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0442 CP001843.1 Genbank CDS 3897410 3898339 . - 0 ID=cds3374;Parent=gene3527;Dbxref=NCBI_GP:AEF85243.1;Name=AEF85243.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=putative inner-membrane translocator;protein_id=AEF85243.1;transl_table=11 CP001843.1 Genbank gene 3898341 3899060 . - . ID=gene3528;Name=TREPR_0441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0441 CP001843.1 Genbank CDS 3898341 3899060 . - 0 ID=cds3375;Parent=gene3528;Dbxref=NCBI_GP:AEF86682.1;Name=AEF86682.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=high affinity branched-chain amino acid ABC transporter%2C ATP-binding protein;protein_id=AEF86682.1;transl_table=11 CP001843.1 Genbank gene 3899044 3899769 . - . ID=gene3529;Name=TREPR_0440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0440 CP001843.1 Genbank CDS 3899044 3899769 . - 0 ID=cds3376;Parent=gene3529;Dbxref=NCBI_GP:AEF84357.1;Name=AEF84357.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=branched-chain amino acid transport ATP-binding protein LivG;protein_id=AEF84357.1;transl_table=11 CP001843.1 Genbank gene 3899878 3900276 . - . ID=gene3530;Name=TREPR_0439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0439 CP001843.1 Genbank CDS 3899878 3900276 . - 0 ID=cds3377;Parent=gene3530;Dbxref=NCBI_GP:AEF84677.1;Name=AEF84677.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84677.1;transl_table=11 CP001843.1 Genbank gene 3900273 3900569 . - . ID=gene3531;Name=TREPR_0438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0438 CP001843.1 Genbank CDS 3900273 3900569 . - 0 ID=cds3378;Parent=gene3531;Dbxref=NCBI_GP:AEF85936.1;Name=AEF85936.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85936.1;transl_table=11 CP001843.1 Genbank gene 3900639 3901172 . - . ID=gene3532;Name=TREPR_0437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0437 CP001843.1 Genbank CDS 3900639 3901172 . - 0 ID=cds3379;Parent=gene3532;Dbxref=NCBI_GP:AEF85582.1;Name=AEF85582.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=nitroreductase;protein_id=AEF85582.1;transl_table=11 CP001843.1 Genbank gene 3901281 3902021 . - . ID=gene3533;Name=TREPR_0436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0436 CP001843.1 Genbank CDS 3901281 3902021 . - 0 ID=cds3380;Parent=gene3533;Dbxref=NCBI_GP:AEF86540.1;Name=AEF86540.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=high-affinity branched-chain amino acid ABC transporter%2C ATP-binding protein;protein_id=AEF86540.1;transl_table=11 CP001843.1 Genbank gene 3902047 3902817 . - . ID=gene3534;Name=TREPR_0435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0435 CP001843.1 Genbank CDS 3902047 3902817 . - 0 ID=cds3381;Parent=gene3534;Dbxref=NCBI_GP:AEF83591.1;Name=AEF83591.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=high affinity branched-chain amino acid ABC transporter%2C ATP-binding protein;protein_id=AEF83591.1;transl_table=11 CP001843.1 Genbank gene 3902795 3903868 . - . ID=gene3535;Name=TREPR_0434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0434 CP001843.1 Genbank CDS 3902795 3903868 . - 0 ID=cds3382;Parent=gene3535;Dbxref=NCBI_GP:AEF84530.1;Name=AEF84530.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=high-affinity branched chain amino acid ABC transporter%2C permease protein;protein_id=AEF84530.1;transl_table=11 CP001843.1 Genbank gene 3903878 3904789 . - . ID=gene3536;Name=TREPR_0433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0433 CP001843.1 Genbank CDS 3903878 3904789 . - 0 ID=cds3383;Parent=gene3536;Dbxref=NCBI_GP:AEF85728.1;Name=AEF85728.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=inner-membrane translocator;protein_id=AEF85728.1;transl_table=11 CP001843.1 Genbank gene 3904910 3906109 . - . ID=gene3537;Name=TREPR_0432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0432 CP001843.1 Genbank CDS 3904910 3906109 . - 0 ID=cds3384;Parent=gene3537;Dbxref=NCBI_GP:AEF85211.1;Name=AEF85211.1;Note=identified by match to protein family HMM PF01094;gbkey=CDS;product=extracellular ligand-binding receptor;protein_id=AEF85211.1;transl_table=11 CP001843.1 Genbank gene 3906393 3907196 . + . ID=gene3538;Name=TREPR_0430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0430 CP001843.1 Genbank CDS 3906393 3907196 . + 0 ID=cds3385;Parent=gene3538;Dbxref=NCBI_GP:AEF85804.1;Name=AEF85804.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=taurine import ATP-binding protein TauB;protein_id=AEF85804.1;transl_table=11 CP001843.1 Genbank gene 3907197 3908051 . + . ID=gene3539;Name=TREPR_0429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0429 CP001843.1 Genbank CDS 3907197 3908051 . + 0 ID=cds3386;Parent=gene3539;Dbxref=NCBI_GP:AEF86183.1;Name=AEF86183.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF86183.1;transl_table=11 CP001843.1 Genbank gene 3908048 3908836 . + . ID=gene3540;Name=TREPR_0428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0428 CP001843.1 Genbank CDS 3908048 3908836 . + 0 ID=cds3387;Parent=gene3540;Dbxref=NCBI_GP:AEF84268.1;Name=AEF84268.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=ABC transporter%2C permease protein;protein_id=AEF84268.1;transl_table=11 CP001843.1 Genbank gene 3908904 3909986 . + . ID=gene3541;Name=TREPR_0427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0427 CP001843.1 Genbank CDS 3908904 3909986 . + 0 ID=cds3388;Parent=gene3541;Dbxref=NCBI_GP:AEF84789.1;Name=AEF84789.1;Note=identified by match to protein family HMM PF09084;gbkey=CDS;product=NMT1/THI5 domain protein;protein_id=AEF84789.1;transl_table=11 CP001843.1 Genbank gene 3910056 3911432 . + . ID=gene3542;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=TREPR_0426 CP001843.1 Genbank CDS 3910056 3911432 . + 0 ID=cds3389;Parent=gene3542;Dbxref=NCBI_GP:AEF85567.1;Name=AEF85567.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR02033;gbkey=CDS;gene=hydA;product=dihydropyrimidinase;protein_id=AEF85567.1;transl_table=11 CP001843.1 Genbank gene 3911434 3912936 . + . ID=gene3543;Name=TREPR_0425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0425 CP001843.1 Genbank CDS 3911434 3912936 . + 0 ID=cds3390;Parent=gene3543;Dbxref=NCBI_GP:AEF85842.1;Name=AEF85842.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01180%3B match to protein family HMM TIGR01037;gbkey=CDS;product=dihydroorotate oxidase;protein_id=AEF85842.1;transl_table=11 CP001843.1 Genbank gene 3912947 3914170 . + . ID=gene3544;Name=TREPR_0424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0424 CP001843.1 Genbank CDS 3912947 3914170 . + 0 ID=cds3391;Parent=gene3544;Dbxref=NCBI_GP:AEF86658.1;Name=AEF86658.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01879;gbkey=CDS;product=N-carbamyl-L-cysteine amidohydrolase;protein_id=AEF86658.1;transl_table=11 CP001843.1 Genbank gene 3914189 3915511 . + . ID=gene3545;Name=TREPR_0423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0423 CP001843.1 Genbank CDS 3914189 3915511 . + 0 ID=cds3392;Parent=gene3545;Dbxref=NCBI_GP:AEF85248.1;Name=AEF85248.1;Note=identified by match to protein family HMM PF00202;gbkey=CDS;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=AEF85248.1;transl_table=11 CP001843.1 Genbank gene 3915533 3916645 . + . ID=gene3546;Name=TREPR_0422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0422 CP001843.1 Genbank CDS 3915533 3916645 . + 0 ID=cds3393;Parent=gene3546;Dbxref=NCBI_GP:AEF83685.1;Name=AEF83685.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;product=alcohol dehydrogenase%2C iron-dependent;protein_id=AEF83685.1;transl_table=11 CP001843.1 Genbank gene 3916669 3918033 . + . ID=gene3547;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=TREPR_0421 CP001843.1 Genbank CDS 3916669 3918033 . + 0 ID=cds3394;Parent=gene3547;Dbxref=NCBI_GP:AEF85835.1;Name=AEF85835.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260;gbkey=CDS;gene=thrC;product=threonine synthase;protein_id=AEF85835.1;transl_table=11 CP001843.1 Genbank gene 3918046 3918837 . + . ID=gene3548;Name=TREPR_0419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0419 CP001843.1 Genbank CDS 3918046 3918837 . + 0 ID=cds3395;Parent=gene3548;Dbxref=NCBI_GP:AEF83853.1;Name=AEF83853.1;Note=identified by match to protein family HMM PF01569;gbkey=CDS;product=PAP2 superfamily protein;protein_id=AEF83853.1;transl_table=11 CP001843.1 Genbank gene 3918847 3919647 . + . ID=gene3549;Name=TREPR_0418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0418 CP001843.1 Genbank CDS 3918847 3919647 . + 0 ID=cds3396;Parent=gene3549;Dbxref=NCBI_GP:AEF84429.1;Name=AEF84429.1;Note=identified by match to protein family HMM PF03781;gbkey=CDS;product=serine/threonine kinase;protein_id=AEF84429.1;transl_table=11 CP001843.1 Genbank gene 3919790 3920758 . + . ID=gene3550;Name=TREPR_0417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0417 CP001843.1 Genbank CDS 3919790 3920758 . + 0 ID=cds3397;Parent=gene3550;Dbxref=NCBI_GP:AEF85443.1;Name=AEF85443.1;Note=identified by match to protein family HMM PF00724;gbkey=CDS;product=NADH:flavin oxidoreductase/nadh oxidase;protein_id=AEF85443.1;transl_table=11 CP001843.1 Genbank pseudogene 3920807 3921250 . + . ID=gene3551;Name=TREPR_0416;Note=conserved hypothetical protein%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0416;pseudo=true CP001843.1 Genbank gene 3921264 3921494 . - . ID=gene3552;Name=TREPR_0415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0415 CP001843.1 Genbank CDS 3921264 3921494 . - 0 ID=cds3398;Parent=gene3552;Dbxref=NCBI_GP:AEF86944.1;Name=AEF86944.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86944.1;transl_table=11 CP001843.1 Genbank gene 3921484 3921963 . - . ID=gene3553;Name=TREPR_0414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0414 CP001843.1 Genbank CDS 3921484 3921963 . - 0 ID=cds3399;Parent=gene3553;Dbxref=NCBI_GP:AEF84079.1;Name=AEF84079.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84079.1;transl_table=11 CP001843.1 Genbank gene 3921960 3922103 . - . ID=gene3554;Name=TREPR_0413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0413 CP001843.1 Genbank CDS 3921960 3922103 . - 0 ID=cds3400;Parent=gene3554;Dbxref=NCBI_GP:AEF84108.1;Name=AEF84108.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84108.1;transl_table=11 CP001843.1 Genbank gene 3922225 3925368 . - . ID=gene3555;Name=TREPR_0412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0412 CP001843.1 Genbank CDS 3922225 3925368 . - 0 ID=cds3401;Parent=gene3555;Dbxref=NCBI_GP:AEF84885.1;Name=AEF84885.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84885.1;transl_table=11 CP001843.1 Genbank gene 3925412 3929110 . - . ID=gene3556;Name=TREPR_0411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0411 CP001843.1 Genbank CDS 3925412 3929110 . - 0 ID=cds3402;Parent=gene3556;Dbxref=NCBI_GP:AEF86014.1;Name=AEF86014.1;gbkey=CDS;product=DNA modification methylase;protein_id=AEF86014.1;transl_table=11 CP001843.1 Genbank gene 3929114 3932410 . - . ID=gene3557;Name=TREPR_0410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0410 CP001843.1 Genbank CDS 3929114 3932410 . - 0 ID=cds3403;Parent=gene3557;Dbxref=NCBI_GP:AEF86975.1;Name=AEF86975.1;Note=identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851;gbkey=CDS;product=putative helicase%2C SNF2/RAD54 family;protein_id=AEF86975.1;transl_table=11 CP001843.1 Genbank gene 3932529 3933041 . + . ID=gene3558;Name=TREPR_0409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0409 CP001843.1 Genbank CDS 3932529 3933041 . + 0 ID=cds3404;Parent=gene3558;Dbxref=NCBI_GP:AEF83969.1;Name=AEF83969.1;Note=identified by match to protein family HMM PF02810;gbkey=CDS;product=SEC-C domain protein;protein_id=AEF83969.1;transl_table=11 CP001843.1 Genbank gene 3933209 3934222 . - . ID=gene3559;Name=TREPR_0408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0408 CP001843.1 Genbank CDS 3933209 3934222 . - 0 ID=cds3405;Parent=gene3559;Dbxref=NCBI_GP:AEF84999.1;Name=AEF84999.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF01408%3B match to protein family HMM PF02894%3B match to protein family HMM PF03447;gbkey=CDS;product=inositol 2-dehydrogenase;protein_id=AEF84999.1;transl_table=11 CP001843.1 Genbank gene 3934326 3935276 . - . ID=gene3560;Name=TREPR_0407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0407 CP001843.1 Genbank CDS 3934326 3935276 . - 0 ID=cds3406;Parent=gene3560;Dbxref=NCBI_GP:AEF85559.1;Name=AEF85559.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;product=1-deoxy-d-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (dxp synthase) (dxps);protein_id=AEF85559.1;transl_table=11 CP001843.1 Genbank gene 3935280 3936107 . - . ID=gene3561;Name=TREPR_0406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0406 CP001843.1 Genbank CDS 3935280 3936107 . - 0 ID=cds3407;Parent=gene3561;Dbxref=NCBI_GP:AEF86496.1;Name=AEF86496.1;Note=identified by match to protein family HMM PF00456;gbkey=CDS;product=transketolase;protein_id=AEF86496.1;transl_table=11 CP001843.1 Genbank gene 3936262 3937290 . - . ID=gene3562;Name=TREPR_0405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0405 CP001843.1 Genbank CDS 3936262 3937290 . - 0 ID=cds3408;Parent=gene3562;Dbxref=NCBI_GP:AEF83725.1;Name=AEF83725.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=catabolite control protein;protein_id=AEF83725.1;transl_table=11 CP001843.1 Genbank gene 3937374 3938363 . - . ID=gene3563;Name=TREPR_0404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0404 CP001843.1 Genbank CDS 3937374 3938363 . - 0 ID=cds3409;Parent=gene3563;Dbxref=NCBI_GP:AEF85851.1;Name=AEF85851.1;Note=identified by match to protein family HMM PF00532;gbkey=CDS;product=D-ribose-binding periplasmic protein;protein_id=AEF85851.1;transl_table=11 CP001843.1 Genbank gene 3938400 3939401 . - . ID=gene3564;Name=TREPR_0403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0403 CP001843.1 Genbank CDS 3938400 3939401 . - 0 ID=cds3410;Parent=gene3564;Dbxref=NCBI_GP:AEF85328.1;Name=AEF85328.1;Note=identified by match to protein family HMM PF02653;gbkey=CDS;product=ribose transport system permease protein RbsC;protein_id=AEF85328.1;transl_table=11 CP001843.1 Genbank gene 3939445 3940965 . - . ID=gene3565;Name=TREPR_0402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0402 CP001843.1 Genbank CDS 3939445 3940965 . - 0 ID=cds3411;Parent=gene3565;Dbxref=NCBI_GP:AEF84753.1;Name=AEF84753.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=ribose import ATP-binding protein RbsA;protein_id=AEF84753.1;transl_table=11 CP001843.1 Genbank gene 3941116 3942111 . - . ID=gene3566;Name=TREPR_0401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0401 CP001843.1 Genbank CDS 3941116 3942111 . - 0 ID=cds3412;Parent=gene3566;Dbxref=NCBI_GP:AEF84880.1;Name=AEF84880.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;product=alanine racemase;protein_id=AEF84880.1;transl_table=11 CP001843.1 Genbank gene 3942120 3942986 . - . ID=gene3567;Name=TREPR_0400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0400 CP001843.1 Genbank CDS 3942120 3942986 . - 0 ID=cds3413;Parent=gene3567;Dbxref=NCBI_GP:AEF85943.1;Name=AEF85943.1;Note=identified by match to protein family HMM PF01261;gbkey=CDS;product=xylose isomerase domain protein TIM barrel;protein_id=AEF85943.1;transl_table=11 CP001843.1 Genbank gene 3943224 3944354 . + . ID=gene3568;Name=TREPR_0399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0399 CP001843.1 Genbank CDS 3943224 3944354 . + 0 ID=cds3414;Parent=gene3568;Dbxref=NCBI_GP:AEF83751.1;Name=AEF83751.1;Note=identified by match to protein family HMM PF01408%3B match to protein family HMM PF02894;gbkey=CDS;product=inositol 2-dehydrogenase;protein_id=AEF83751.1;transl_table=11 CP001843.1 Genbank gene 3944379 3945188 . + . ID=gene3569;Name=TREPR_0398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0398 CP001843.1 Genbank CDS 3944379 3945188 . + 0 ID=cds3415;Parent=gene3569;Dbxref=NCBI_GP:AEF84724.1;Name=AEF84724.1;Note=identified by match to protein family HMM PF06845;gbkey=CDS;product=myo-inositol catabolism protein;protein_id=AEF84724.1;transl_table=11 CP001843.1 Genbank gene 3945215 3947092 . + . ID=gene3570;Name=TREPR_0397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0397 CP001843.1 Genbank CDS 3945215 3947092 . + 0 ID=cds3416;Parent=gene3570;Dbxref=NCBI_GP:AEF84742.1;Name=AEF84742.1;Note=identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776;gbkey=CDS;product=probable malonic semialdehyde oxidative decarboxylase;protein_id=AEF84742.1;transl_table=11 CP001843.1 Genbank gene 3947102 3948577 . + . ID=gene3571;Name=TREPR_0396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0396 CP001843.1 Genbank CDS 3947102 3948577 . + 0 ID=cds3417;Parent=gene3571;Dbxref=NCBI_GP:AEF85292.1;Name=AEF85292.1;Note=identified by match to protein family HMM PF01261;gbkey=CDS;product=Myo-inositol catabolism protein IolE;protein_id=AEF85292.1;transl_table=11 CP001843.1 Genbank gene 3948580 3949836 . + . ID=gene3572;Name=pgk_2;gbkey=Gene;gene=pgk_2;gene_biotype=protein_coding;locus_tag=TREPR_0395 CP001843.1 Genbank CDS 3948580 3949836 . + 0 ID=cds3418;Parent=gene3572;Dbxref=NCBI_GP:AEF86868.1;Name=AEF86868.1;Note=identified by match to protein family HMM PF00162;gbkey=CDS;gene=pgk_2;product=phosphoglycerate kinase;protein_id=AEF86868.1;transl_table=11 CP001843.1 Genbank gene 3949900 3950928 . + . ID=gene3573;Name=TREPR_0394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0394 CP001843.1 Genbank CDS 3949900 3950928 . + 0 ID=cds3419;Parent=gene3573;Dbxref=NCBI_GP:AEF83705.1;Name=AEF83705.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01546;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase%2C type II;protein_id=AEF83705.1;transl_table=11 CP001843.1 Genbank gene 3950983 3952437 . + . ID=gene3574;Name=TREPR_0393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0393 CP001843.1 Genbank CDS 3950983 3952437 . + 0 ID=cds3420;Parent=gene3574;Dbxref=NCBI_GP:AEF86844.1;Name=AEF86844.1;Note=identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949;gbkey=CDS;product=malate dehydrogenase (oxaloacetate-decarboxylating);protein_id=AEF86844.1;transl_table=11 CP001843.1 Genbank gene 3952556 3952969 . + . ID=gene3575;Name=TREPR_0392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0392 CP001843.1 Genbank CDS 3952556 3952969 . + 0 ID=cds3421;Parent=gene3575;Dbxref=NCBI_GP:AEF86075.1;Name=AEF86075.1;gbkey=CDS;product=histidine triad;protein_id=AEF86075.1;transl_table=11 CP001843.1 Genbank gene 3952982 3954304 . + . ID=gene3576;Name=TREPR_0391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0391 CP001843.1 Genbank CDS 3952982 3954304 . + 0 ID=cds3422;Parent=gene3576;Dbxref=NCBI_GP:AEF85301.1;Name=AEF85301.1;gbkey=CDS;product=general glycosylation pathway protein;protein_id=AEF85301.1;transl_table=11 CP001843.1 Genbank gene 3954377 3955813 . - . ID=gene3577;Name=TREPR_0390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0390 CP001843.1 Genbank CDS 3954377 3955813 . - 0 ID=cds3423;Parent=gene3577;Dbxref=NCBI_GP:AEF84748.1;Name=AEF84748.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF02906;gbkey=CDS;product=Fe-hydrogenase large subunit family protein;protein_id=AEF84748.1;transl_table=11 CP001843.1 Genbank gene 3956029 3956826 . - . ID=gene3578;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=TREPR_0388 CP001843.1 Genbank CDS 3956029 3956826 . - 0 ID=cds3424;Parent=gene3578;Dbxref=NCBI_GP:AEF84768.1;Name=AEF84768.1;Note=identified by match to protein family HMM PF00290%3B match to protein family HMM TIGR00262;gbkey=CDS;gene=trpA;product=tryptophan synthase%2C alpha subunit;protein_id=AEF84768.1;transl_table=11 CP001843.1 Genbank gene 3956819 3958027 . - . ID=gene3579;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=TREPR_0387 CP001843.1 Genbank CDS 3956819 3958027 . - 0 ID=cds3425;Parent=gene3579;Dbxref=NCBI_GP:AEF83813.1;Name=AEF83813.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00263;gbkey=CDS;gene=trpB;product=tryptophan synthase%2C beta subunit;protein_id=AEF83813.1;transl_table=11 CP001843.1 Genbank pseudogene 3958024 3958767 . - . ID=gene3580;Name=trpF;Note=N-(5'phosphoribosyl)anthranilate isomerase%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00697;gbkey=Gene;gene=trpF;gene_biotype=pseudogene;locus_tag=TREPR_0386;pseudo=true CP001843.1 Genbank gene 3958764 3959657 . - . ID=gene3581;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=TREPR_0385 CP001843.1 Genbank CDS 3958764 3959657 . - 0 ID=cds3426;Parent=gene3581;Dbxref=NCBI_GP:AEF85890.1;Name=AEF85890.1;Note=identified by match to protein family HMM PF00218;gbkey=CDS;gene=trpC;product=indole-3-glycerol phosphate synthase;protein_id=AEF85890.1;transl_table=11 CP001843.1 Genbank gene 3959654 3960709 . - . ID=gene3582;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=TREPR_0384 CP001843.1 Genbank CDS 3959654 3960709 . - 0 ID=cds3427;Parent=gene3582;Dbxref=NCBI_GP:AEF85333.1;Name=AEF85333.1;Note=identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM TIGR01245;gbkey=CDS;gene=trpD;product=anthranilate phosphoribosyltransferase;protein_id=AEF85333.1;transl_table=11 CP001843.1 Genbank gene 3960702 3961277 . - . ID=gene3583;Name=TREPR_0383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0383 CP001843.1 Genbank CDS 3960702 3961277 . - 0 ID=cds3428;Parent=gene3583;Dbxref=NCBI_GP:AEF84932.1;Name=AEF84932.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566;gbkey=CDS;product=para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II;protein_id=AEF84932.1;transl_table=11 CP001843.1 Genbank gene 3961274 3962782 . - . ID=gene3584;Name=TREPR_0382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0382 CP001843.1 Genbank CDS 3961274 3962782 . - 0 ID=cds3429;Parent=gene3584;Dbxref=NCBI_GP:AEF83663.1;Name=AEF83663.1;Note=identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715;gbkey=CDS;product=anthranilate synthase component 1 (Anthranilate synthasecomponent I);protein_id=AEF83663.1;transl_table=11 CP001843.1 Genbank gene 3963024 3963584 . - . ID=gene3585;Name=TREPR_0381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0381 CP001843.1 Genbank CDS 3963024 3963584 . - 0 ID=cds3430;Parent=gene3585;Dbxref=NCBI_GP:AEF86879.1;Name=AEF86879.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86879.1;transl_table=11 CP001843.1 Genbank gene 3963692 3965275 . - . ID=gene3586;Name=TREPR_0380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0380 CP001843.1 Genbank CDS 3963692 3965275 . - 0 ID=cds3431;Parent=gene3586;Dbxref=NCBI_GP:AEF85662.1;Name=AEF85662.1;Note=identified by match to protein family HMM PF00403;gbkey=CDS;product=heavy metal transport/detoxification protein;protein_id=AEF85662.1;transl_table=11 CP001843.1 Genbank gene 3965337 3966515 . - . ID=gene3587;Name=TREPR_0379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0379 CP001843.1 Genbank CDS 3965337 3966515 . - 0 ID=cds3432;Parent=gene3587;Dbxref=NCBI_GP:AEF85766.1;Name=AEF85766.1;Note=identified by match to protein family HMM PF01963%3B match to protein family HMM TIGR00261;gbkey=CDS;product=TraB family protein;protein_id=AEF85766.1;transl_table=11 CP001843.1 Genbank gene 3966512 3967570 . - . ID=gene3588;Name=TREPR_0378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0378 CP001843.1 Genbank CDS 3966512 3967570 . - 0 ID=cds3433;Parent=gene3588;Dbxref=NCBI_GP:AEF83870.1;Name=AEF83870.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;product=DHH superfamily protein%2C subfamily 1;protein_id=AEF83870.1;transl_table=11 CP001843.1 Genbank gene 3967572 3969032 . - . ID=gene3589;Name=TREPR_0377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0377 CP001843.1 Genbank CDS 3967572 3969032 . - 0 ID=cds3434;Parent=gene3589;Dbxref=NCBI_GP:AEF86473.1;Name=AEF86473.1;Note=identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;product=putative lipoprotein;protein_id=AEF86473.1;transl_table=11 CP001843.1 Genbank pseudogene 3969119 3970966 . + . ID=gene3590;Name=TREPR_0376;Note=hypothetical protein%3B this region contains one or more premature stops and/or frameshifts%3Bidentified by glimmer%3B putative;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0376;pseudo=true CP001843.1 Genbank gene 3970981 3972081 . - . ID=gene3591;Name=trmU;gbkey=Gene;gene=trmU;gene_biotype=protein_coding;locus_tag=TREPR_0375 CP001843.1 Genbank CDS 3970981 3972081 . - 0 ID=cds3435;Parent=gene3591;Dbxref=NCBI_GP:AEF83694.1;Name=AEF83694.1;Note=identified by match to protein family HMM PF03054%3B match to protein family HMM TIGR00420;gbkey=CDS;gene=trmU;product=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;protein_id=AEF83694.1;transl_table=11 CP001843.1 Genbank gene 3972078 3972680 . - . ID=gene3592;Name=TREPR_0374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0374 CP001843.1 Genbank CDS 3972078 3972680 . - 0 ID=cds3436;Parent=gene3592;Dbxref=NCBI_GP:AEF86736.1;Name=AEF86736.1;Note=identified by match to protein family HMM TIGR00277;gbkey=CDS;product=hdig domain protein;protein_id=AEF86736.1;transl_table=11 CP001843.1 Genbank gene 3972941 3973858 . - . ID=gene3593;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=TREPR_0373 CP001843.1 Genbank CDS 3972941 3973858 . - 0 ID=cds3437;Parent=gene3593;Dbxref=NCBI_GP:AEF86171.1;Name=AEF86171.1;Note=identified by match to protein family HMM PF04204%3B match to protein family HMM TIGR01001;gbkey=CDS;gene=metA;product=homoserine O-succinyltransferase;protein_id=AEF86171.1;transl_table=11 CP001843.1 Genbank gene 3973908 3974501 . - . ID=gene3594;Name=TREPR_0372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0372 CP001843.1 Genbank CDS 3973908 3974501 . - 0 ID=cds3438;Parent=gene3594;Dbxref=NCBI_GP:AEF84149.1;Name=AEF84149.1;Note=identified by match to protein family HMM PF03352;gbkey=CDS;product=DNA-3-methyladenine glycosylase 1;protein_id=AEF84149.1;transl_table=11 CP001843.1 Genbank gene 3974573 3977449 . + . ID=gene3595;Name=TREPR_0371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0371 CP001843.1 Genbank CDS 3974573 3977449 . + 0 ID=cds3439;Parent=gene3595;Dbxref=NCBI_GP:AEF85228.1;Name=AEF85228.1;Note=identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193;gbkey=CDS;product=putative peptidase%2C M16 family;protein_id=AEF85228.1;transl_table=11 CP001843.1 Genbank gene 3977524 3978102 . + . ID=gene3596;Name=TREPR_0370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0370 CP001843.1 Genbank CDS 3977524 3978102 . + 0 ID=cds3440;Parent=gene3596;Dbxref=NCBI_GP:AEF85622.1;Name=AEF85622.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;product=nitroreductase family protein;protein_id=AEF85622.1;transl_table=11 CP001843.1 Genbank gene 3978156 3978929 . + . ID=gene3597;Name=TREPR_0369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0369 CP001843.1 Genbank CDS 3978156 3978929 . + 0 ID=cds3441;Parent=gene3597;Dbxref=NCBI_GP:AEF86630.1;Name=AEF86630.1;Note=identified by match to protein family HMM PF00561;gbkey=CDS;product=alpha/beta hydrolase family protein;protein_id=AEF86630.1;transl_table=11 CP001843.1 Genbank gene 3978926 3980482 . + . ID=gene3598;Name=TREPR_0368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0368 CP001843.1 Genbank CDS 3978926 3980482 . + 0 ID=cds3442;Parent=gene3598;Dbxref=NCBI_GP:AEF86466.1;Name=AEF86466.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245;gbkey=CDS;product=UDP-N-acetylmuramyl pentapeptide synthase;protein_id=AEF86466.1;transl_table=11 CP001843.1 Genbank gene 3980496 3981674 . + . ID=gene3599;Name=TREPR_0367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0367 CP001843.1 Genbank CDS 3980496 3981674 . + 0 ID=cds3443;Parent=gene3599;Dbxref=NCBI_GP:AEF83734.1;Name=AEF83734.1;Note=identified by match to protein family HMM PF01820%3B match to protein family HMM PF07478%3B match to protein family HMM TIGR01205;gbkey=CDS;product=D-alanine--D-alanine ligase;protein_id=AEF83734.1;transl_table=11 CP001843.1 Genbank gene 3981729 3983252 . - . ID=gene3600;Name=TREPR_0366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0366 CP001843.1 Genbank CDS 3981729 3983252 . - 0 ID=cds3444;Parent=gene3600;Dbxref=NCBI_GP:AEF84328.1;Name=AEF84328.1;Note=identified by match to protein family HMM PF02563;gbkey=CDS;product=polysaccharide biosynthesis/export protein;protein_id=AEF84328.1;transl_table=11 CP001843.1 Genbank gene 3983313 3983441 . - . ID=gene3601;Name=TREPR_0365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0365 CP001843.1 Genbank CDS 3983313 3983441 . - 0 ID=cds3445;Parent=gene3601;Dbxref=NCBI_GP:AEF85094.1;Name=AEF85094.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85094.1;transl_table=11 CP001843.1 Genbank gene 3983611 3983802 . + . ID=gene3602;Name=TREPR_0363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0363 CP001843.1 Genbank CDS 3983611 3983802 . + 0 ID=cds3446;Parent=gene3602;Dbxref=NCBI_GP:AEF85706.1;Name=AEF85706.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85706.1;transl_table=11 CP001843.1 Genbank gene 3983896 3984105 . - . ID=gene3603;Name=TREPR_0362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0362 CP001843.1 Genbank CDS 3983896 3984105 . - 0 ID=cds3447;Parent=gene3603;Dbxref=NCBI_GP:AEF86405.1;Name=AEF86405.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF86405.1;transl_table=11 CP001843.1 Genbank gene 3984083 3984316 . - . ID=gene3604;Name=TREPR_0361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0361 CP001843.1 Genbank CDS 3984083 3984316 . - 0 ID=cds3448;Parent=gene3604;Dbxref=NCBI_GP:AEF83671.1;Name=AEF83671.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF83671.1;transl_table=11 CP001843.1 Genbank pseudogene 3984476 3984658 . - . ID=gene3605;Name=TREPR_0360;Note=ATPase%3B this region contains one or more premature stops and/or frameshifts;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0360;pseudo=true CP001843.1 Genbank gene 3985646 3986557 . - . ID=gene3606;Name=TREPR_0358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0358 CP001843.1 Genbank CDS 3985646 3986557 . - 0 ID=cds3449;Parent=gene3606;Dbxref=NCBI_GP:AEF84214.1;Name=AEF84214.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF84214.1;transl_table=11 CP001843.1 Genbank gene 3986573 3988132 . - . ID=gene3607;Name=TREPR_0357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0357 CP001843.1 Genbank CDS 3986573 3988132 . - 0 ID=cds3450;Parent=gene3607;Dbxref=NCBI_GP:AEF85046.1;Name=AEF85046.1;Note=identified by match to protein family HMM PF03062;gbkey=CDS;product=membrane bOund o-acyl transferase%2C mboat;protein_id=AEF85046.1;transl_table=11 CP001843.1 Genbank gene 3988224 3989690 . - . ID=gene3608;Name=TREPR_0356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0356 CP001843.1 Genbank CDS 3988224 3989690 . - 0 ID=cds3451;Parent=gene3608;Dbxref=NCBI_GP:AEF85028.1;Name=AEF85028.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85028.1;transl_table=11 CP001843.1 Genbank gene 3989687 3990694 . - . ID=gene3609;Name=TREPR_0355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0355 CP001843.1 Genbank CDS 3989687 3990694 . - 0 ID=cds3452;Parent=gene3609;Dbxref=NCBI_GP:AEF85967.1;Name=AEF85967.1;Note=identified by match to protein family HMM PF02706;gbkey=CDS;product=chain length determinant protein;protein_id=AEF85967.1;transl_table=11 CP001843.1 Genbank gene 3990706 3991896 . - . ID=gene3610;Name=TREPR_0354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0354 CP001843.1 Genbank CDS 3990706 3991896 . - 0 ID=cds3453;Parent=gene3610;Dbxref=NCBI_GP:AEF86950.1;Name=AEF86950.1;Note=identified by match to protein family HMM PF02719;gbkey=CDS;product=polysaccharide biosynthesis protein CapD;protein_id=AEF86950.1;transl_table=11 CP001843.1 Genbank gene 3991908 3992573 . - . ID=gene3611;Name=TREPR_0353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0353 CP001843.1 Genbank CDS 3991908 3992573 . - 0 ID=cds3454;Parent=gene3611;Dbxref=NCBI_GP:AEF84775.1;Name=AEF84775.1;Note=identified by match to protein family HMM PF02397;gbkey=CDS;product=undecaprenyl- phosphate galactosephosphotransferase;protein_id=AEF84775.1;transl_table=11 CP001843.1 Genbank gene 3992570 3993331 . - . ID=gene3612;Name=TREPR_0352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0352 CP001843.1 Genbank CDS 3992570 3993331 . - 0 ID=cds3455;Parent=gene3612;Dbxref=NCBI_GP:AEF84816.1;Name=AEF84816.1;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=AEF84816.1;transl_table=11 CP001843.1 Genbank pseudogene 3993487 3994239 . - . ID=gene3613;Name=TREPR_0351;Note=glycosyltransferase%2C group 1 family%3B this gene contains a frame shift which may be the result of a sequencing error%3B identified by match to protein family HMM PF00534;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0351;pseudo=true CP001843.1 Genbank pseudogene 3994232 3994606 . - . ID=gene3614;Name=TREPR_0350;Note=alpha-D-QuiNAc alpha-1%2C3-galactosyltransferase%3B this gene contains a frame shift which may be the result of a sequencing error;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0350;pseudo=true CP001843.1 Genbank gene 3994599 3995648 . - . ID=gene3615;Name=TREPR_0349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0349 CP001843.1 Genbank CDS 3994599 3995648 . - 0 ID=cds3456;Parent=gene3615;Dbxref=NCBI_GP:AEF85060.1;Name=AEF85060.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85060.1;transl_table=11 CP001843.1 Genbank gene 3995669 3996955 . - . ID=gene3616;Name=TREPR_0348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0348 CP001843.1 Genbank CDS 3995669 3996955 . - 0 ID=cds3457;Parent=gene3616;Dbxref=NCBI_GP:AEF85726.1;Name=AEF85726.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85726.1;transl_table=11 CP001843.1 Genbank gene 3997086 3997265 . + . ID=gene3617;Name=TREPR_0346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0346 CP001843.1 Genbank CDS 3997086 3997265 . + 0 ID=cds3458;Parent=gene3617;Dbxref=NCBI_GP:AEF85262.1;Name=AEF85262.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85262.1;transl_table=11 CP001843.1 Genbank gene 3997223 3998230 . - . ID=gene3618;Name=TREPR_0347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0347 CP001843.1 Genbank CDS 3997223 3998230 . - 0 ID=cds3459;Parent=gene3618;Dbxref=NCBI_GP:AEF86439.1;Name=AEF86439.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86439.1;transl_table=11 CP001843.1 Genbank gene 3998217 3999482 . - . ID=gene3619;Name=TREPR_0345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0345 CP001843.1 Genbank CDS 3998217 3999482 . - 0 ID=cds3460;Parent=gene3619;Dbxref=NCBI_GP:AEF85801.1;Name=AEF85801.1;Note=identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026;gbkey=CDS;product=VI polysaccharide biosynthesis protein VipA/tviB;protein_id=AEF85801.1;transl_table=11 CP001843.1 Genbank gene 3999489 4000460 . - . ID=gene3620;Name=TREPR_0344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0344 CP001843.1 Genbank CDS 3999489 4000460 . - 0 ID=cds3461;Parent=gene3620;Dbxref=NCBI_GP:AEF85424.1;Name=AEF85424.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993;gbkey=CDS;product=VI polysaccharide biosynthesis protein VipB/tviC;protein_id=AEF85424.1;transl_table=11 CP001843.1 Genbank gene 4000476 4001561 . - . ID=gene3621;Name=TREPR_0343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0343 CP001843.1 Genbank CDS 4000476 4001561 . - 0 ID=cds3462;Parent=gene3621;Dbxref=NCBI_GP:AEF86750.1;Name=AEF86750.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=putative lipopolysaccharide biosynthesis;protein_id=AEF86750.1;transl_table=11 CP001843.1 Genbank gene 4001549 4002652 . - . ID=gene3622;Name=TREPR_0342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0342 CP001843.1 Genbank CDS 4001549 4002652 . - 0 ID=cds3463;Parent=gene3622;Dbxref=NCBI_GP:AEF84577.1;Name=AEF84577.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;product=capsular polysaccharide biosynthesis protein;protein_id=AEF84577.1;transl_table=11 CP001843.1 Genbank gene 4002649 4003821 . - . ID=gene3623;Name=TREPR_0341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0341 CP001843.1 Genbank CDS 4002649 4003821 . - 0 ID=cds3464;Parent=gene3623;Dbxref=NCBI_GP:AEF83600.1;Name=AEF83600.1;gbkey=CDS;product=putative membrane protein;protein_id=AEF83600.1;transl_table=11 CP001843.1 Genbank gene 4003891 4005780 . - . ID=gene3624;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=TREPR_0340 CP001843.1 Genbank CDS 4003891 4005780 . - 0 ID=cds3465;Parent=gene3624;Dbxref=NCBI_GP:AEF84189.1;Name=AEF84189.1;Note=identified by match to protein family HMM PF00310%3B match to protein family HMM PF00733%3B match to protein family HMM TIGR01536;gbkey=CDS;gene=asnB;product=asparagine synthase (glutamine-hydrolyzing);protein_id=AEF84189.1;transl_table=11 CP001843.1 Genbank gene 4005806 4006873 . - . ID=gene3625;Name=TREPR_0339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0339 CP001843.1 Genbank CDS 4005806 4006873 . - 0 ID=cds3466;Parent=gene3625;Dbxref=NCBI_GP:AEF86343.1;Name=AEF86343.1;gbkey=CDS;product=putative glycosyltransferase;protein_id=AEF86343.1;transl_table=11 CP001843.1 Genbank gene 4006967 4008277 . - . ID=gene3626;Name=TREPR_0338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0338 CP001843.1 Genbank CDS 4006967 4008277 . - 0 ID=cds3467;Parent=gene3626;Dbxref=NCBI_GP:AEF85735.1;Name=AEF85735.1;Note=identified by match to protein family HMM PF01943;gbkey=CDS;product=lipopolysaccharide biosynthesis protein;protein_id=AEF85735.1;transl_table=11 CP001843.1 Genbank gene 4008271 4009371 . - . ID=gene3627;Name=TREPR_0337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0337 CP001843.1 Genbank CDS 4008271 4009371 . - 0 ID=cds3468;Parent=gene3627;Dbxref=NCBI_GP:AEF85173.1;Name=AEF85173.1;Note=identified by match to protein family HMM PF01041;gbkey=CDS;product=aminotransferase%2C DegT/DnrJ/EryC1/StrS family;protein_id=AEF85173.1;transl_table=11 CP001843.1 Genbank gene 4009428 4010048 . - . ID=gene3628;Name=TREPR_0336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0336 CP001843.1 Genbank CDS 4009428 4010048 . - 0 ID=cds3469;Parent=gene3628;Dbxref=NCBI_GP:AEF86997.1;Name=AEF86997.1;gbkey=CDS;product=pyrophosphatase PpaX;protein_id=AEF86997.1;transl_table=11 CP001843.1 Genbank gene 4010104 4011045 . - . ID=gene3629;Name=TREPR_0335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0335 CP001843.1 Genbank CDS 4010104 4011045 . - 0 ID=cds3470;Parent=gene3629;Dbxref=NCBI_GP:AEF84676.1;Name=AEF84676.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;product=1-deoxy-d-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (dxp synthase) (dxps);protein_id=AEF84676.1;transl_table=11 CP001843.1 Genbank gene 4011042 4011878 . - . ID=gene3630;Name=TREPR_0334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0334 CP001843.1 Genbank CDS 4011042 4011878 . - 0 ID=cds3471;Parent=gene3630;Dbxref=NCBI_GP:AEF85178.1;Name=AEF85178.1;Note=identified by match to protein family HMM PF00456;gbkey=CDS;product=transketolase;protein_id=AEF85178.1;transl_table=11 CP001843.1 Genbank gene 4011924 4012799 . - . ID=gene3631;Name=TREPR_0333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0333 CP001843.1 Genbank CDS 4011924 4012799 . - 0 ID=cds3472;Parent=gene3631;Dbxref=NCBI_GP:AEF83586.1;Name=AEF83586.1;Note=identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993;gbkey=CDS;product=putative NAD-binding domain 4 protein;protein_id=AEF83586.1;transl_table=11 CP001843.1 Genbank gene 4012888 4013970 . - . ID=gene3632;Name=TREPR_0332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0332 CP001843.1 Genbank CDS 4012888 4013970 . - 0 ID=cds3473;Parent=gene3632;Dbxref=NCBI_GP:AEF84854.1;Name=AEF84854.1;Note=identified by match to protein family HMM PF01757;gbkey=CDS;product=putative acyltransferase;protein_id=AEF84854.1;transl_table=11 CP001843.1 Genbank gene 4013967 4015037 . - . ID=gene3633;Name=TREPR_0331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0331 CP001843.1 Genbank CDS 4013967 4015037 . - 0 ID=cds3474;Parent=gene3633;Dbxref=NCBI_GP:AEF85655.1;Name=AEF85655.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85655.1;transl_table=11 CP001843.1 Genbank pseudogene 4015095 4015358 . - . ID=gene3634;Name=TREPR_0330;Note=methyltransferase type 12%3B this region contains one or more premature stops and/or frameshifts;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0330;pseudo=true CP001843.1 Genbank pseudogene 4015438 4015665 . - . ID=gene3635;Name=TREPR_0329;Note=methyltransferase type 12%3B this region contains one or more premature stops and/or frameshifts;gbkey=Gene;gene_biotype=pseudogene;locus_tag=TREPR_0329;pseudo=true CP001843.1 Genbank gene 4015961 4016398 . - . ID=gene3636;Name=wxcM_1;gbkey=Gene;gene=wxcM_1;gene_biotype=protein_coding;locus_tag=TREPR_0328 CP001843.1 Genbank CDS 4015961 4016398 . - 0 ID=cds3475;Parent=gene3636;Dbxref=NCBI_GP:AEF84827.1;Name=AEF84827.1;Note=identified by match to protein family HMM PF05523%3B overlaps another CDS with the same product name;gbkey=CDS;gene=wxcM_1;product=bifunctional acetyl transferase/isomerase;protein_id=AEF84827.1;transl_table=11 CP001843.1 Genbank gene 4016395 4016793 . - . ID=gene3637;Name=wxcM_2;gbkey=Gene;gene=wxcM_2;gene_biotype=protein_coding;locus_tag=TREPR_0327 CP001843.1 Genbank CDS 4016395 4016793 . - 0 ID=cds3476;Parent=gene3637;Dbxref=NCBI_GP:AEF85861.1;Name=AEF85861.1;Note=identified by match to protein family HMM PF05523%3B overlaps another CDS with the same product name;gbkey=CDS;gene=wxcM_2;product=bifunctional acetyl transferase/isomerase;protein_id=AEF85861.1;transl_table=11 CP001843.1 Genbank gene 4017216 4017653 . - . ID=gene3638;Name=TREPR_0324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0324 CP001843.1 Genbank CDS 4017216 4017653 . - 0 ID=cds3477;Parent=gene3638;Dbxref=NCBI_GP:AEF84701.1;Name=AEF84701.1;Note=identified by match to protein family HMM PF01850;gbkey=CDS;product=virulence associated protein C;protein_id=AEF84701.1;transl_table=11 CP001843.1 Genbank gene 4017616 4017840 . - . ID=gene3639;Name=TREPR_0323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0323 CP001843.1 Genbank CDS 4017616 4017840 . - 0 ID=cds3478;Parent=gene3639;Dbxref=NCBI_GP:AEF84046.1;Name=AEF84046.1;gbkey=CDS;product=putative virulence protein;protein_id=AEF84046.1;transl_table=11 CP001843.1 Genbank gene 4017950 4018633 . + . ID=gene3640;Name=TREPR_0322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0322 CP001843.1 Genbank CDS 4017950 4018633 . + 0 ID=cds3479;Parent=gene3640;Dbxref=NCBI_GP:AEF85023.1;Name=AEF85023.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85023.1;transl_table=11 CP001843.1 Genbank gene 4018630 4019508 . + . ID=gene3641;Name=TREPR_0321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0321 CP001843.1 Genbank CDS 4018630 4019508 . + 0 ID=cds3480;Parent=gene3641;Dbxref=NCBI_GP:AEF85429.1;Name=AEF85429.1;Note=identified by match to protein family HMM PF08843;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85429.1;transl_table=11 CP001843.1 Genbank gene 4019556 4019957 . - . ID=gene3642;Name=TREPR_0320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0320 CP001843.1 Genbank CDS 4019556 4019957 . - 0 ID=cds3481;Parent=gene3642;Dbxref=NCBI_GP:AEF86556.1;Name=AEF86556.1;gbkey=CDS;product=PIN domain protein;protein_id=AEF86556.1;transl_table=11 CP001843.1 Genbank gene 4019954 4020184 . - . ID=gene3643;Name=TREPR_0319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0319 CP001843.1 Genbank CDS 4019954 4020184 . - 0 ID=cds3482;Parent=gene3643;Dbxref=NCBI_GP:AEF86945.1;Name=AEF86945.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86945.1;transl_table=11 CP001843.1 Genbank gene 4020348 4021559 . - . ID=gene3644;Name=TREPR_0318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0318 CP001843.1 Genbank CDS 4020348 4021559 . - 0 ID=cds3483;Parent=gene3644;Dbxref=NCBI_GP:AEF84606.1;Name=AEF84606.1;gbkey=CDS;product=ATPase;protein_id=AEF84606.1;transl_table=11 CP001843.1 Genbank gene 4021636 4022088 . - . ID=gene3645;Name=TREPR_0317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0317 CP001843.1 Genbank CDS 4021636 4022088 . - 0 ID=cds3484;Parent=gene3645;Dbxref=NCBI_GP:AEF84954.1;Name=AEF84954.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84954.1;transl_table=11 CP001843.1 Genbank gene 4022081 4022368 . - . ID=gene3646;Name=TREPR_0316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0316 CP001843.1 Genbank CDS 4022081 4022368 . - 0 ID=cds3485;Parent=gene3646;Dbxref=NCBI_GP:AEF86162.1;Name=AEF86162.1;Note=identified by match to protein family HMM PF01909;gbkey=CDS;product=DNA polymerase%2C beta domain protein region;protein_id=AEF86162.1;transl_table=11 CP001843.1 Genbank gene 4022365 4022778 . - . ID=gene3647;Name=TREPR_0315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0315 CP001843.1 Genbank CDS 4022365 4022778 . - 0 ID=cds3486;Parent=gene3647;Dbxref=NCBI_GP:AEF84973.1;Name=AEF84973.1;Note=identified by match to protein family HMM PF04892;gbkey=CDS;product=VanZ family protein;protein_id=AEF84973.1;transl_table=11 CP001843.1 Genbank gene 4023121 4023918 . + . ID=gene3648;Name=TREPR_0314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0314 CP001843.1 Genbank CDS 4023121 4023918 . + 0 ID=cds3487;Parent=gene3648;Dbxref=NCBI_GP:AEF86166.1;Name=AEF86166.1;Note=identified by match to protein family HMM PF02673;gbkey=CDS;product=undecaprenyl-diphosphatase;protein_id=AEF86166.1;transl_table=11 CP001843.1 Genbank gene 4024036 4024719 . + . ID=gene3649;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=TREPR_0313 CP001843.1 Genbank CDS 4024036 4024719 . + 0 ID=cds3488;Parent=gene3649;Dbxref=NCBI_GP:AEF84472.1;Name=AEF84472.1;Note=identified by match to protein family HMM PF01025;gbkey=CDS;gene=grpE;product=co-chaperone GrpE;protein_id=AEF84472.1;transl_table=11 CP001843.1 Genbank gene 4024761 4026704 . + . ID=gene3650;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=TREPR_0312 CP001843.1 Genbank CDS 4024761 4026704 . + 0 ID=cds3489;Parent=gene3650;Dbxref=NCBI_GP:AEF85267.1;Name=AEF85267.1;Note=identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350;gbkey=CDS;gene=dnaK;product=chaperone protein DnaK;protein_id=AEF85267.1;transl_table=11 CP001843.1 Genbank gene 4026762 4027886 . + . ID=gene3651;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=TREPR_0311 CP001843.1 Genbank CDS 4026762 4027886 . + 0 ID=cds3490;Parent=gene3651;Dbxref=NCBI_GP:AEF84258.1;Name=AEF84258.1;Note=identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349;gbkey=CDS;gene=dnaJ;product=chaperone protein DnaJ;protein_id=AEF84258.1;transl_table=11 CP001843.1 Genbank gene 4028093 4029496 . + . ID=gene3652;Name=TREPR_0310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0310 CP001843.1 Genbank CDS 4028093 4029496 . + 0 ID=cds3491;Parent=gene3652;Dbxref=NCBI_GP:AEF86780.1;Name=AEF86780.1;Note=identified by match to protein family HMM PF01512%3B match to protein family HMM TIGR01945;gbkey=CDS;product=electron transport complex protein RnfC;protein_id=AEF86780.1;transl_table=11 CP001843.1 Genbank gene 4029508 4030560 . + . ID=gene3653;Name=TREPR_0309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0309 CP001843.1 Genbank CDS 4029508 4030560 . + 0 ID=cds3492;Parent=gene3653;Dbxref=NCBI_GP:AEF85737.1;Name=AEF85737.1;Note=identified by match to protein family HMM PF03116%3B match to protein family HMM TIGR01946;gbkey=CDS;product=RnfD;protein_id=AEF85737.1;transl_table=11 CP001843.1 Genbank gene 4030557 4031168 . + . ID=gene3654;Name=TREPR_0308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0308 CP001843.1 Genbank CDS 4030557 4031168 . + 0 ID=cds3493;Parent=gene3654;Dbxref=NCBI_GP:AEF84815.1;Name=AEF84815.1;Note=identified by match to protein family HMM PF04205;gbkey=CDS;product=electron transport complex%2C rnfabcdGe type%2C g subunit;protein_id=AEF84815.1;transl_table=11 CP001843.1 Genbank gene 4031165 4031773 . + . ID=gene3655;Name=TREPR_0307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0307 CP001843.1 Genbank CDS 4031165 4031773 . + 0 ID=cds3494;Parent=gene3655;Dbxref=NCBI_GP:AEF83831.1;Name=AEF83831.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01948;gbkey=CDS;product=na(+)-translocating NADH-quinone reductase subunit d (na(+)-translocating nqr subunit d) (na(+)-nqr subunit d) (nqr complexsubunit d) (nqr-1 subunit d);protein_id=AEF83831.1;transl_table=11 CP001843.1 Genbank gene 4031770 4032366 . + . ID=gene3656;Name=TREPR_0306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0306 CP001843.1 Genbank CDS 4031770 4032366 . + 0 ID=cds3495;Parent=gene3656;Dbxref=NCBI_GP:AEF86283.1;Name=AEF86283.1;Note=identified by match to protein family HMM PF02508;gbkey=CDS;product=Na+-translocating NADH-quinone reductase%2C E subunit;protein_id=AEF86283.1;transl_table=11 CP001843.1 Genbank gene 4032379 4033197 . + . ID=gene3657;Name=TREPR_0305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0305 CP001843.1 Genbank CDS 4032379 4033197 . + 0 ID=cds3496;Parent=gene3657;Dbxref=NCBI_GP:AEF85386.1;Name=AEF85386.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04060%3B match to protein family HMM TIGR01944;gbkey=CDS;product=ferredoxin;protein_id=AEF85386.1;transl_table=11 CP001843.1 Genbank gene 4033181 4034014 . + . ID=gene3658;Name=TREPR_0304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0304 CP001843.1 Genbank CDS 4033181 4034014 . + 0 ID=cds3497;Parent=gene3658;Dbxref=NCBI_GP:AEF86118.1;Name=AEF86118.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86118.1;transl_table=11 CP001843.1 Genbank gene 4034047 4035480 . + . ID=gene3659;Name=TREPR_0303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0303 CP001843.1 Genbank CDS 4034047 4035480 . + 0 ID=cds3498;Parent=gene3659;Dbxref=NCBI_GP:AEF84058.1;Name=AEF84058.1;Note=identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521;gbkey=CDS;product=metallo-beta-lactamase family protein;protein_id=AEF84058.1;transl_table=11 CP001843.1 Genbank gene 4035496 4036701 . + . ID=gene3660;Name=TREPR_0302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0302 CP001843.1 Genbank CDS 4035496 4036701 . + 0 ID=cds3499;Parent=gene3660;Dbxref=NCBI_GP:AEF84990.1;Name=AEF84990.1;Note=identified by match to protein family HMM PF00248;gbkey=CDS;product=aldo/keto reductase;protein_id=AEF84990.1;transl_table=11 CP001843.1 Genbank gene 4036719 4037444 . + . ID=gene3661;Name=TREPR_0301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0301 CP001843.1 Genbank CDS 4036719 4037444 . + 0 ID=cds3500;Parent=gene3661;Dbxref=NCBI_GP:AEF85979.1;Name=AEF85979.1;Note=identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186;gbkey=CDS;product=RNA methyltransferase%2C TrmH family%2C group 3;protein_id=AEF85979.1;transl_table=11 CP001843.1 Genbank gene 4037527 4037997 . + . ID=gene3662;Name=TREPR_0300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0300 CP001843.1 Genbank CDS 4037527 4037997 . + 0 ID=cds3501;Parent=gene3662;Dbxref=NCBI_GP:AEF87004.1;Name=AEF87004.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF87004.1;transl_table=11 CP001843.1 Genbank gene 4038002 4038922 . + . ID=gene3663;Name=TREPR_0299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0299 CP001843.1 Genbank CDS 4038002 4038922 . + 0 ID=cds3502;Parent=gene3663;Dbxref=NCBI_GP:AEF83601.1;Name=AEF83601.1;Note=identified by match to protein family HMM PF01435;gbkey=CDS;product=peptidase%2C M48 family;protein_id=AEF83601.1;transl_table=11 CP001843.1 Genbank gene 4039029 4041224 . + . ID=gene3664;Name=TREPR_0298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0298 CP001843.1 Genbank CDS 4039029 4041224 . + 0 ID=cds3503;Parent=gene3664;Dbxref=NCBI_GP:AEF84702.1;Name=AEF84702.1;Note=identified by match to protein family HMM PF00211%3B match to protein family HMM PF05226;gbkey=CDS;product=adenylate/guanylate cyclase catalytic domain protein;protein_id=AEF84702.1;transl_table=11 CP001843.1 Genbank gene 4041436 4042458 . - . ID=gene3665;Name=TREPR_0296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0296 CP001843.1 Genbank CDS 4041436 4042458 . - 0 ID=cds3504;Parent=gene3665;Dbxref=NCBI_GP:AEF84042.1;Name=AEF84042.1;Note=identified by match to protein family HMM PF00669%3B match to protein family HMM PF00700;gbkey=CDS;product=flagellar filament 34.5 kDa core protein (Class B);protein_id=AEF84042.1;transl_table=11 CP001843.1 Genbank gene 4042586 4043659 . - . ID=gene3666;Name=TREPR_0295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0295 CP001843.1 Genbank CDS 4042586 4043659 . - 0 ID=cds3505;Parent=gene3666;Dbxref=NCBI_GP:AEF85125.1;Name=AEF85125.1;gbkey=CDS;product=putative aminopeptidase;protein_id=AEF85125.1;transl_table=11 CP001843.1 Genbank gene 4043699 4044130 . - . ID=gene3667;Name=TREPR_0294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0294 CP001843.1 Genbank CDS 4043699 4044130 . - 0 ID=cds3506;Parent=gene3667;Dbxref=NCBI_GP:AEF85980.1;Name=AEF85980.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF85980.1;transl_table=11 CP001843.1 Genbank gene 4044147 4044893 . + . ID=gene3668;Name=TREPR_0293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0293 CP001843.1 Genbank CDS 4044147 4044893 . + 0 ID=cds3507;Parent=gene3668;Dbxref=NCBI_GP:AEF83602.1;Name=AEF83602.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF83602.1;transl_table=11 CP001843.1 Genbank gene 4044936 4045220 . + . ID=gene3669;Name=TREPR_0292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0292 CP001843.1 Genbank CDS 4044936 4045220 . + 0 ID=cds3508;Parent=gene3669;Dbxref=NCBI_GP:AEF86554.1;Name=AEF86554.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF86554.1;transl_table=11 CP001843.1 Genbank gene 4045252 4046133 . + . ID=gene3670;Name=TREPR_0291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0291 CP001843.1 Genbank CDS 4045252 4046133 . + 0 ID=cds3509;Parent=gene3670;Dbxref=NCBI_GP:AEF84984.1;Name=AEF84984.1;Note=identified by match to protein family HMM PF00588;gbkey=CDS;product=RNA methyltransferase%2C TrmH family;protein_id=AEF84984.1;transl_table=11 CP001843.1 Genbank gene 4046151 4046573 . + . ID=gene3671;Name=TREPR_0290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0290 CP001843.1 Genbank CDS 4046151 4046573 . + 0 ID=cds3510;Parent=gene3671;Dbxref=NCBI_GP:AEF84965.1;Name=AEF84965.1;Note=identified by match to protein family HMM TIGR02436;gbkey=CDS;product=conserved hypothetical protein;protein_id=AEF84965.1;transl_table=11 CP001843.1 Genbank gene 4046655 4047419 . - . ID=gene3672;Name=TREPR_0289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0289 CP001843.1 Genbank CDS 4046655 4047419 . - 0 ID=cds3511;Parent=gene3672;Dbxref=NCBI_GP:AEF83768.1;Name=AEF83768.1;Note=identified by match to protein family HMM PF03328;gbkey=CDS;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=AEF83768.1;transl_table=11 CP001843.1 Genbank gene 4047438 4047935 . - . ID=gene3673;Name=TREPR_0288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0288 CP001843.1 Genbank CDS 4047438 4047935 . - 0 ID=cds3512;Parent=gene3673;Dbxref=NCBI_GP:AEF86603.1;Name=AEF86603.1;Note=identified by match to protein family HMM PF04073;gbkey=CDS;product=YbaK/prolyl-tRNA synthetase associated region;protein_id=AEF86603.1;transl_table=11 CP001843.1 Genbank gene 4047976 4048449 . - . ID=gene3674;Name=TREPR_0287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0287 CP001843.1 Genbank CDS 4047976 4048449 . - 0 ID=cds3513;Parent=gene3674;Dbxref=NCBI_GP:AEF85393.1;Name=AEF85393.1;Note=identified by glimmer%3B putative;gbkey=CDS;product=hypothetical protein;protein_id=AEF85393.1;transl_table=11 CP001843.1 Genbank gene 4048495 4048989 . - . ID=gene3675;Name=TREPR_0286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0286 CP001843.1 Genbank CDS 4048495 4048989 . - 0 ID=cds3514;Parent=gene3675;Dbxref=NCBI_GP:AEF83570.1;Name=AEF83570.1;gbkey=CDS;product=putative lipoprotein;protein_id=AEF83570.1;transl_table=11 CP001843.1 Genbank gene 4049052 4050626 . - . ID=gene3676;Name=TREPR_0285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0285 CP001843.1 Genbank CDS 4049052 4050626 . - 0 ID=cds3515;Parent=gene3676;Dbxref=NCBI_GP:AEF86923.1;Name=AEF86923.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;product=putative ABC transporter%2C permease protein;protein_id=AEF86923.1;transl_table=11 CP001843.1 Genbank gene 4050623 4051387 . - . ID=gene3677;Name=TREPR_0284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0284 CP001843.1 Genbank CDS 4050623 4051387 . - 0 ID=cds3516;Parent=gene3677;Dbxref=NCBI_GP:AEF86149.1;Name=AEF86149.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;product=sulfate/thiosulfate import ATP-binding protein CysA 2 (Sulfate-transporting ATPase 2);protein_id=AEF86149.1;transl_table=11 CP001843.1 Genbank gene 4051400 4052428 . - . ID=gene3678;Name=TREPR_0283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0283 CP001843.1 Genbank CDS 4051400 4052428 . - 0 ID=cds3517;Parent=gene3678;Dbxref=NCBI_GP:AEF86121.1;Name=AEF86121.1;Note=identified by match to protein family HMM PF01547;gbkey=CDS;product=putative iron ABC transporter%2C solute-binding lipoprotein;protein_id=AEF86121.1;transl_table=11 CP001843.1 Genbank gene 4052428 4054974 . - . ID=gene3679;Name=gyrA_2;gbkey=Gene;gene=gyrA_2;gene_biotype=protein_coding;locus_tag=TREPR_0282 CP001843.1 Genbank CDS 4052428 4054974 . - 0 ID=cds3518;Parent=gene3679;Dbxref=NCBI_GP:AEF83876.1;Name=AEF83876.1;Note=identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063;gbkey=CDS;gene=gyrA_2;product=DNA gyrase%2C A subunit;protein_id=AEF83876.1;transl_table=11 CP001843.1 Genbank gene 4055144 4056181 . - . ID=gene3680;Name=TREPR_0281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0281 CP001843.1 Genbank CDS 4055144 4056181 . - 0 ID=cds3519;Parent=gene3680;Dbxref=NCBI_GP:AEF86329.1;Name=AEF86329.1;Note=identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254;gbkey=CDS;product=putative signaling protein;protein_id=AEF86329.1;transl_table=11 CP001843.1 Genbank gene 4056213 4057883 . - . ID=gene3681;Name=TREPR_0280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=TREPR_0280 CP001843.1 Genbank CDS 4056213 4057883 . - 0 ID=cds3520;Parent=gene3681;Dbxref=NCBI_GP:AEF86486.1;Name=AEF86486.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229;gbkey=CDS;product=multi-sensor hybrid histidine kinase;protein_id=AEF86486.1;transl_table=11 CP001843.1 Genbank gene 4057920 4059827 . - . ID=gene3682;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=TREPR_0279 CP001843.1 Genbank CDS 4057920 4059827 . - 0 ID=cds3521;Parent=gene3682;Dbxref=NCBI_GP:AEF85697.1;Name=AEF85697.1;Note=identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059;gbkey=CDS;gene=gyrB;product=DNA gyrase%2C B subunit;protein_id=AEF85697.1;transl_table=11 ###